Miyakogusa Predicted Gene
- Lj2g3v2171850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2171850.1 Non Chatacterized Hit- tr|I1JH54|I1JH54_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18679
PE,80.43,0,seg,NULL; DEAD-like helicases superfamily,Helicase,
superfamily 1/2, ATP-binding domain; PHD zinc fi,CUFF.38803.1
(1667 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 1858 0.0
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 150 5e-36
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 146 1e-34
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 129 1e-29
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 129 2e-29
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 129 2e-29
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 125 4e-28
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 119 2e-26
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 118 4e-26
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 112 3e-24
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 108 4e-23
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 103 9e-22
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 95 4e-19
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 84 1e-15
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 80 9e-15
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 80 1e-14
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 80 1e-14
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 77 1e-13
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 76 2e-13
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 76 2e-13
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 75 4e-13
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 75 4e-13
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 75 4e-13
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 75 5e-13
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 70 2e-11
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 70 2e-11
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 70 2e-11
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 68 4e-11
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 68 5e-11
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 68 6e-11
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 65 4e-10
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 64 6e-10
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 64 1e-09
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 64 1e-09
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 64 1e-09
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 62 3e-09
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 62 3e-09
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 62 5e-09
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 60 9e-09
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 60 9e-09
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 60 1e-08
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 60 1e-08
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 60 1e-08
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 60 1e-08
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 60 1e-08
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 59 3e-08
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 57 8e-08
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 57 8e-08
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 57 8e-08
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 57 8e-08
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 57 1e-07
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 56 2e-07
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 56 2e-07
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 1858 bits (4813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 980/1665 (58%), Positives = 1203/1665 (72%), Gaps = 56/1665 (3%)
Query: 24 TEFDKEKV-GEAGEEARD-NSGDIDEPYFVEVDRSSWLS--SEHLDISEVILSDLNLREG 79
+E D+ ++ G+ E + D N DID+PY+V + SS +S ++ D++EV+L++ ++RE
Sbjct: 21 SESDRNQLPGDEAEGSGDKNVEDIDKPYYVNICLSSRVSEQQQNFDLAEVVLTNFSVRER 80
Query: 80 F---SGFELSEGFYQDPQYSLRFRVCNVNNVLGRIKLGHWPVLPYTDIHLELVKWDTVDN 136
S F D SLRFR+CNV N + RIKLGHWPVL +DI LELV + V +
Sbjct: 81 VGSSSTFTKPIEVDHDLDCSLRFRLCNVTNFVDRIKLGHWPVLSSSDITLELVD-NKVSD 139
Query: 137 VETCTVLLSGIFDGPDEGVSGLLHLASLKFVTLRTVLGVRLSEDIHSLRIRVEVLKSAFD 196
E +V+ S FDGP EGVSGL HLAS+KF+TLR + G +E + S R+RVE+L+ AFD
Sbjct: 140 DEVGSVIWSASFDGPGEGVSGLAHLASIKFLTLRLMPG---NEGLLSPRVRVEMLQQAFD 196
Query: 197 ACESLLEASRQLWKKSMMNVMSWLRPEIMISEVRYGFG-NCKKME--VDQKTETGDGRKY 253
AC+SLLE +RQ+WKKSM++VMSWLRPE+M SE RYG N K +E V + ET D K
Sbjct: 197 ACDSLLENTRQIWKKSMIHVMSWLRPEVMTSEARYGTRFNVKDIESSVVTEDETLDSSKQ 256
Query: 254 SRFDPAGFYEAIKPSKSXXXXXXXXXXXXXXXXXYQRRAAFWMVEREKALKESQGERERN 313
S FD A FYEAIKPSK+ YQRRAA+WMV+RE+ + G++E N
Sbjct: 257 SSFDAAAFYEAIKPSKTDAMLGDDIADLLPELRPYQRRAAYWMVQRERGDPITLGDKEDN 316
Query: 314 QFHSPLCVPVDFLDTRSKMFFNPFSGNISLCPETPSPYVLGGILADEMGLGKTVELLACI 373
QF SPL + V FLD+ +KMF NPFSGNISL PE SP + GGILADEMGLGKTVELLACI
Sbjct: 317 QFISPLSISVGFLDSATKMFLNPFSGNISLTPEYFSPRIQGGILADEMGLGKTVELLACI 376
Query: 374 YAHRRSASGSDTLIESVPQVNGDQNITLKRLKRERVECICGAVNESIKYQGLWVQCDICD 433
++HR+ A + + + V N L+RLKRERVECICGAV+ES KY+G+WVQCD+CD
Sbjct: 377 FSHRKPAE-DEISVSNGSSVTDVLNAGLRRLKRERVECICGAVSESHKYKGVWVQCDLCD 435
Query: 434 AWQHADCVRYSPKGKSLKSKQ-----GSESKTYK--TTIAVRDGEYVCQMCSELIQATES 486
AWQHADCV YSPKGK K Q S+ K+ K T I VR+GEY+CQMCSEL+Q T S
Sbjct: 436 AWQHADCVGYSPKGKGKKDSQHIDEKASQKKSKKDATEIIVREGEYICQMCSELLQVTAS 495
Query: 487 PIASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASAD 546
PI++GATLIVCPAPILPQWH EI RHTR GSL TCIYEGVR+ S S ++DI++L +AD
Sbjct: 496 PISTGATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLNAD 555
Query: 547 IVITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNA 606
IV+TTYDVLKEDL+HD DRH+GDRH LRFQKRYPVIPT LTRI+WWR+CLDEAQMVESNA
Sbjct: 556 IVLTTYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNA 615
Query: 607 TAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGD 666
AATEMALRL++KH WCITGTPIQRKLDDL+GLL+FLK +PF+ RWW EV+RDPYE+ D
Sbjct: 616 AAATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDPYERRD 675
Query: 667 IGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHETCVRDA 726
AMEFTH FKQ+MWRSSK HVADEL LP QEEC+SWL S +EEHFY RQH+TCV A
Sbjct: 676 TKAMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSRQHDTCVSYA 735
Query: 727 HEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHPQVGSSGLR 786
EVIE+L+ DIL R G S S +PL+TH EA KLLN+LLKLRQACCHPQVGSSGLR
Sbjct: 736 REVIETLKRDILKR---GHTS---SDNPLVTHAEAAKLLNSLLKLRQACCHPQVGSSGLR 789
Query: 787 SLQQSPMTMEEILMVLINKTKIEGEEALRRLVVSLNGLAAIATIQQDFSQAALLYNEALT 846
SLQQSPMTMEEILMVL+ KT+ EGEEALR L+V+LNG+AAIA ++Q+FS+A LY EAL+
Sbjct: 790 SLQQSPMTMEEILMVLVKKTQSEGEEALRVLIVALNGIAAIAMLKQEFSEAVSLYKEALS 849
Query: 847 LTEEHSEDFRLDPLLNIHIHHNLAETLPLAENVALILPSKGKQFSGTSAVKSTRKHFIAK 906
+TEEH+EDFRLDPLLNIHI HNLAE LP+A++ L + G+ + VK H +
Sbjct: 850 ITEEHAEDFRLDPLLNIHILHNLAEILPMAKSYGGKLSASGRPETKID-VKDDDHHRAS- 907
Query: 907 VDRCLVKRQKISGCDDKNLEVASAEPSHIASSLSENDLNEDLKFDDLSASPVKSLIAECE 966
KRQ+I+ + +L S+E H +++ ++ LK D K+L C+
Sbjct: 908 ------KRQRINELE--SLTHDSSETVHQREAIAPDN---GLKKDGECHEECKTLDIVCD 956
Query: 967 DSKKKYLSVFNSKLSAAQQEFQNSSTQVRNAYRESRTDQNTCWWLEALHHAEQNKDFSTE 1026
K KYLS FNSKLSAAQ EF+ S QV + + Q + WWL+AL EQNKDFS+E
Sbjct: 957 TLKVKYLSAFNSKLSAAQHEFKKSYNQVSESL-SNMGKQRSVWWLDALQLTEQNKDFSSE 1015
Query: 1027 LIRKIEEAISGNSNNSKSSRIAARFRGISSLKYQIQTGLDQLEASRKVLLERLLEIDHTM 1086
L RKIEEA+ GN NNS SSR ++RFR I +K +QT +D LE SRK +++R+LEID TM
Sbjct: 1016 LTRKIEEALHGNLNNSSSSRESSRFRTIHGMKLHLQTCMDMLERSRKKVIDRILEIDQTM 1075
Query: 1087 ENPKGEDIERVGKCRNCQPNCDGPPCVLCELDELFQGYEARLFVLKNERGGI--ISSAEE 1144
E PK EDIER+ C+ C N DGPPC+ CELDELFQ YEARLF L R G+ I++AEE
Sbjct: 1076 EKPKLEDIERISNCKYCNKNSDGPPCIHCELDELFQEYEARLFRLNKSRRGVMEIAAAEE 1135
Query: 1145 AVDLQKKKFALNHFLSKLSQSNHSSTVSDIDNEESKKRNVGQRVVVSRSASELELILGAM 1204
V LQKK+ A N FL LS + S D+EE KRN G VV+S+S SE E++LG +
Sbjct: 1136 TVHLQKKRDARNLFLFGLSSRSKDLNASRGDDEEPTKRNAGDIVVLSKSPSETEIVLGVI 1195
Query: 1205 KNYCKARLGRGSVSAATRHLHMLEGMRKEFAHARSLALAQAQYLRAHDEIKMAVSRLHLR 1264
+N+CK L R S AAT+HLH LE MRKE+ HAR LA QAQ LRA+DEI M+ RL LR
Sbjct: 1196 RNHCKTHLDRESKLAATKHLHTLEVMRKEYVHARVLARDQAQLLRAYDEINMSTMRLQLR 1255
Query: 1265 ANEDDKSLDALGENELVAASSDFSHEKYMSLALLSQIKGKLRYLQGLVQSKQKLSLESPD 1324
+EDD S+ ALG +EL AS +++K+M+ + L IKGKLRYL+GL++SKQK ESPD
Sbjct: 1256 ESEDDTSIYALGRDELDVASVLNTNDKFMAQSSLLSIKGKLRYLKGLMKSKQKQESESPD 1315
Query: 1325 SSSFIQETTKISNTKEEKGALISKTDEETCPVCQEKLGNQRMVFQCGHFTCCKCLFAMTE 1384
SS I ET S+ E++ + K D E CP+C E L NQ+MVFQCGH TCC C FAMTE
Sbjct: 1316 LSSPIHETVDASDPAEQESENLLKRD-EACPICHEILRNQKMVFQCGHSTCCNCFFAMTE 1374
Query: 1385 QRLQHSKTHNWVMCPTCRQHTDFGNIAYAVDAQNESSNSSMQHTVDSCEKCETSISVKGS 1444
++ WVMCP CRQHTD NIAYA D +N S+SS Q DS E S+ V+GS
Sbjct: 1375 RKSVQETLQKWVMCPICRQHTDVRNIAYADDRRN--SSSSDQDHKDS----EASLVVQGS 1428
Query: 1445 YGTKIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVA 1504
YGTKIEAVTRRIL IK++D + KVLVFSSWNDVLDVLEHAFAAN+IT +RMKGGRK+Q A
Sbjct: 1429 YGTKIEAVTRRILWIKSSDPQTKVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTA 1488
Query: 1505 INQFRGKQNGTK--GCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQ 1562
I++F+G + T+ + KSIQVLLLL+QHGANGLNLLEAQHV+LVEPLLNPAAEAQ
Sbjct: 1489 ISKFKGSEKETQKTNSHQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQ 1548
Query: 1563 AISRVHRIGQKNKTLIHRFIVKDTVEDSIYKLNRSRSNH--SFISGNTKNQDQPVLTLKD 1620
A+ RVHRIGQ+ TL+HRF+V TVE+SIYKLNR+++ + SF S NTKNQDQ LTLKD
Sbjct: 1549 AVGRVHRIGQEKPTLVHRFLVSGTVEESIYKLNRNKNTNLSSFSSRNTKNQDQQFLTLKD 1608
Query: 1621 VESLLSRTPVTMPESDENPIA-NADLRNFPPSMAAAIAAERRLND 1664
+ESL + E ++NP +LR+ PPS+AAA+AAERR+ +
Sbjct: 1609 LESLFASPTAETAEMEQNPGERQENLRDLPPSVAAALAAERRMKE 1653
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 143/299 (47%), Gaps = 51/299 (17%)
Query: 485 ESPIASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLAS 544
+S + +G LIVCP +L QW EI H +PGSL ++ G + D L+
Sbjct: 484 KSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYG-------QSRPKDAKLLSQ 536
Query: 545 ADIVITTYDVLKEDLSHD-SDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVE 603
+D+VITTY VL + S + S HEG + + W+R+ LDEA ++
Sbjct: 537 SDVVITTYGVLTSEFSQENSADHEG-----------------IYAVRWFRIVLDEAHTIK 579
Query: 604 SNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYE 663
++ + + A L + WC+TGTPIQ L+DLY LLRFL++ P+ T+ WW ++++ P+E
Sbjct: 580 NSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFE 639
Query: 664 KGDIGAMEFTHTIFKQIMWRSSKKHVADE----LDLPSQEECLSWLTLSPVEEHFYQRQH 719
+GD ++ +I K IM R +K E L LP + + + LS E FY
Sbjct: 640 EGDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALF 699
Query: 720 ETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
+ + +E + + H A +L LL+LRQ C HP
Sbjct: 700 KRSKVKFDQFVEQGK---------------------VLHNYA-SILELLLRLRQCCDHP 736
Score = 107 bits (267), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 52/309 (16%)
Query: 1306 RYLQGLVQSKQKLSLESPDSSSFIQETTKISNTKEEKGALISKTDEETCPVCQEKLGNQR 1365
R+L G ++ + P S +F+QE EE + K ++ CP+C E L +
Sbjct: 757 RFLSGKSSGLEREGKDVP-SEAFVQEVV------EE----LRKGEQGECPICLEALEDA- 804
Query: 1366 MVFQCGHFTCCKCLFAMTEQRLQHSKTHNWVMCPTCRQHTDFGNIAYAVDAQNESSNSSM 1425
++ C H C +CL A +CP CR S
Sbjct: 805 VLTPCAHRLCRECLLASWRNSTSG-------LCPVCRNTV------------------SK 839
Query: 1426 QHTVDSCEKCETSISVKGSY--GTKIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEH 1483
Q + + + + V+ ++ +KI A+ + ++++ K ++FS W LD+L+
Sbjct: 840 QELITAPTESRFQVDVEKNWVESSKITALLEELEGLRSSGSKS--ILFSQWTAFLDLLQI 897
Query: 1484 AFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLL 1543
+ NN +FVR+ G Q + E S SI VLL+ ++ G G+NL
Sbjct: 898 PLSRNNFSFVRLDGTLSQQQREKVLK---------EFSEDGSILVLLMSLKAGGVGINLT 948
Query: 1544 EAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVKDTVEDSIYKLNRSRSNHSF 1603
A + +++P NPA E QA+ R+HRIGQ + I RFIVK TVE+ + + +
Sbjct: 949 AASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARK--QRM 1006
Query: 1604 ISGNTKNQD 1612
ISG +Q+
Sbjct: 1007 ISGALTDQE 1015
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 137/290 (47%), Gaps = 43/290 (14%)
Query: 489 ASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIV 548
A G TLI+CP +L QW DE+ H++P ++ +Y G T D +AS D+V
Sbjct: 739 AKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTH-------DAKAIASHDVV 791
Query: 549 ITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATA 608
+TTY VL D + ++ RI W+R+ LDEA ++S T
Sbjct: 792 LTTYGVLTSAYKQD------------------MANSIFHRIDWYRIVLDEAHTIKSWKTQ 833
Query: 609 ATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIG 668
A + L S WC+TGTP+Q KL+DLY LL FL V P+ + WW+++++ PYE GD
Sbjct: 834 AAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPR 893
Query: 669 AMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHETCVRDAHE 728
++ I + +M R +K+ E L L L P + + + RD +
Sbjct: 894 GLKLIKAILRPLMLRRTKETRDKEGSL--------ILELPPTDVQVIECEQSEAERDFYT 945
Query: 729 VIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
+ ++ V + L++ ++ +L LL+LRQ C HP
Sbjct: 946 ALFKRSKVQFDQFVAQGKVLHNYAN----------ILELLLRLRQCCNHP 985
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 33/241 (13%)
Query: 1354 CPVCQEKLGNQRMVFQCGHFTCCKCLFAMTEQRLQHSKTHNWVMCPTCRQHTDFGNIAYA 1413
CP+C E + ++ C H C +CL L ++ + +CP CR +
Sbjct: 1040 CPICLES-ADDPVLTPCAHRMCRECL-------LTSWRSPSCGLCPICRTILKRTEL--- 1088
Query: 1414 VDAQNESSNSSMQHTVDSCEKCETSISVKGSYGTKIEAVTRRILSIKATDHKEKVLVFSS 1473
+ DS + + + K S +K+ + + + IK + EK +VFS
Sbjct: 1089 -----------ISCPTDSIFRVDVVKNWKES--SKVSELLKCLEKIKKSGSGEKSIVFSQ 1135
Query: 1474 WNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGCEKSTPKSIQVLLLLI 1533
W LD+LE F+R G+ AQ +G++ K ++ K+I LL+ +
Sbjct: 1136 WTSFLDLLEIPLRRRGFEFLRF-DGKLAQ------KGREKVLKEFNETKQKTI--LLMSL 1186
Query: 1534 QHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVKDTVEDSIYK 1593
+ G GLNL A V L++P NPA E QAI R+HRIGQK + RFIVKDTVE+ + +
Sbjct: 1187 KAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQ 1246
Query: 1594 L 1594
+
Sbjct: 1247 V 1247
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 288 YQRRAAFWMVEREKALKESQGERERNQFHSPLCVPVDFLDTRS-KMFFNPFSGNISLCPE 346
YQ++A +WM E EK + E+ H P D R+ ++ N FSG ++
Sbjct: 619 YQKQALYWMSESEKGI---DVEKAAETLH-PCWEAYRICDERAPSIYLNIFSGEATIQFP 674
Query: 347 TPSPYVLGGILADEMGLGKTVELLACIYAH--RRSASGSDTLIESVPQVNGDQ 397
T + GGILAD MGLGKTV +A I A R + D L V VN D+
Sbjct: 675 TATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDVL---VADVNADK 724
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 189/460 (41%), Gaps = 118/460 (25%)
Query: 354 GGILADEMGLGKTVELLACIYAHRRSASGSDTLIESVPQVNGDQNITLKRLKRERVECIC 413
GGILAD+ GLGKTV +A I R +
Sbjct: 579 GGILADDQGLGKTVSTIALILKERSKPAQ------------------------------- 607
Query: 414 GAVNESIKYQGLWVQCDICDAWQHADCVRYSPKGKSLKSKQGSESKTYKTTIAVRDGEYV 473
A ES K + ++ + +C P G+S K + S+ + + + G+ V
Sbjct: 608 -ACEESTKKEIFDLESET------GECAPLKPSGRS-KHFEHSQLLSNENKVG---GDSV 656
Query: 474 CQMCSELIQATESPIASGATLIVCPAPILPQWHDEIIRH-TRPGSLKTCIYEGVRDTSFS 532
++ T P A TL+VCP ++ QW DE+ + T +L +Y G T
Sbjct: 657 GKV-------TGRPAA--GTLVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTK-- 705
Query: 533 NTSLMDISDLASADIVITTYDVL-----KEDLSHDSDR-----HEGDRHLLRF----QKR 578
D +LA D+V+TT+ ++ K+ L D D H+G F +++
Sbjct: 706 -----DPHELAKYDVVVTTFSIVSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRK 760
Query: 579 YP--------------VIPTLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCI 624
YP + L ++ W+RV LDEAQ +++ T L +K WC+
Sbjct: 761 YPPDSKKKGSKKKKVEFLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCL 820
Query: 625 TGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRS 684
+GTPIQ +DDLY RFLK P+++Y + +++P + + + I K +M R
Sbjct: 821 SGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRR 880
Query: 685 SKKHVADE---LDLPSQEECLSWLTLSPVEEHFYQR---QHETCVRDAHEVIESLRNDIL 738
+K + D + LP + L + + E FY + + T R+ E +++ + +
Sbjct: 881 TKGSLLDGKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEA-GTVKQNYV 939
Query: 739 NRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
N +L LL+LRQAC HP
Sbjct: 940 N------------------------ILLMLLRLRQACDHP 955
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 1466 EKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQV---AINQFRGKQNGTKGCEKST 1522
EK +VFS W +L++LE + +++I + R+ G A+ F +T
Sbjct: 1124 EKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDF------------NT 1171
Query: 1523 PKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFI 1582
+ V+++ ++ + GLN++ A HV++++ NP E QAI R HRIGQ + RF
Sbjct: 1172 LPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFT 1231
Query: 1583 VKDTVEDSIYKLNRSRSNH--SFISGNTKNQDQPVLTLKDVESLL 1625
VKDTVED I L + + S + K Q LT++D+ L
Sbjct: 1232 VKDTVEDRILALQQKKRMMVASAFGEDEKGSRQSHLTVEDLSYLF 1276
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 189/460 (41%), Gaps = 118/460 (25%)
Query: 354 GGILADEMGLGKTVELLACIYAHRRSASGSDTLIESVPQVNGDQNITLKRLKRERVECIC 413
GGILAD+ GLGKTV +A I R +
Sbjct: 421 GGILADDQGLGKTVSTIALILKERSKPAQ------------------------------- 449
Query: 414 GAVNESIKYQGLWVQCDICDAWQHADCVRYSPKGKSLKSKQGSESKTYKTTIAVRDGEYV 473
A ES K + ++ + +C P G+S K + S+ + + + G+ V
Sbjct: 450 -ACEESTKKEIFDLESET------GECAPLKPSGRS-KHFEHSQLLSNENKVG---GDSV 498
Query: 474 CQMCSELIQATESPIASGATLIVCPAPILPQWHDEIIRH-TRPGSLKTCIYEGVRDTSFS 532
++ T P A TL+VCP ++ QW DE+ + T +L +Y G T
Sbjct: 499 GKV-------TGRPAA--GTLVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTK-- 547
Query: 533 NTSLMDISDLASADIVITTYDVL-----KEDLSHDSDR-----HEGDRHLLRF----QKR 578
D +LA D+V+TT+ ++ K+ L D D H+G F +++
Sbjct: 548 -----DPHELAKYDVVVTTFSIVSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRK 602
Query: 579 YP--------------VIPTLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCI 624
YP + L ++ W+RV LDEAQ +++ T L +K WC+
Sbjct: 603 YPPDSKKKGSKKKKVEFLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCL 662
Query: 625 TGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRS 684
+GTPIQ +DDLY RFLK P+++Y + +++P + + + I K +M R
Sbjct: 663 SGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRR 722
Query: 685 SKKHVADE---LDLPSQEECLSWLTLSPVEEHFYQR---QHETCVRDAHEVIESLRNDIL 738
+K + D + LP + L + + E FY + + T R+ E +++ + +
Sbjct: 723 TKGSLLDGKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEA-GTVKQNYV 781
Query: 739 NRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
N +L LL+LRQAC HP
Sbjct: 782 N------------------------ILLMLLRLRQACDHP 797
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 17/165 (10%)
Query: 1466 EKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQV---AINQFRGKQNGTKGCEKST 1522
EK +VFS W +L++LE + +++I + R+ G A+ F +T
Sbjct: 966 EKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDF------------NT 1013
Query: 1523 PKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFI 1582
+ V+++ ++ + GLN++ A HV++++ NP E QAI R HRIGQ + RF
Sbjct: 1014 LPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFT 1073
Query: 1583 VKDTVEDSIYKLNRSRSNH--SFISGNTKNQDQPVLTLKDVESLL 1625
VKDTVED I L + + S + K Q LT++D+ L
Sbjct: 1074 VKDTVEDRILALQQKKRMMVASAFGEDEKGSRQSHLTVEDLSYLF 1118
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 189/460 (41%), Gaps = 118/460 (25%)
Query: 354 GGILADEMGLGKTVELLACIYAHRRSASGSDTLIESVPQVNGDQNITLKRLKRERVECIC 413
GGILAD+ GLGKTV +A I R +
Sbjct: 586 GGILADDQGLGKTVSTIALILKERSKPAQ------------------------------- 614
Query: 414 GAVNESIKYQGLWVQCDICDAWQHADCVRYSPKGKSLKSKQGSESKTYKTTIAVRDGEYV 473
A ES K + ++ + +C P G+S K + S+ + + + G+ V
Sbjct: 615 -ACEESTKKEIFDLESET------GECAPLKPSGRS-KHFEHSQLLSNENKVG---GDSV 663
Query: 474 CQMCSELIQATESPIASGATLIVCPAPILPQWHDEIIRH-TRPGSLKTCIYEGVRDTSFS 532
++ T P A TL+VCP ++ QW DE+ + T +L +Y G T
Sbjct: 664 GKV-------TGRPAA--GTLVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTK-- 712
Query: 533 NTSLMDISDLASADIVITTYDVL-----KEDLSHDSDR-----HEGDRHLLRF----QKR 578
D +LA D+V+TT+ ++ K+ L D D H+G F +++
Sbjct: 713 -----DPHELAKYDVVVTTFSIVSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRK 767
Query: 579 YP--------------VIPTLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCI 624
YP + L ++ W+RV LDEAQ +++ T L +K WC+
Sbjct: 768 YPPDSKKKGSKKKKVEFLSGPLAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCL 827
Query: 625 TGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRS 684
+GTPIQ +DDLY RFLK P+++Y + +++P + + + I K +M R
Sbjct: 828 SGTPIQNSIDDLYSYFRFLKYDPYSSYVLFCSTIKNPITRNPVKGYQKLQAILKTVMLRR 887
Query: 685 SKKHVADE---LDLPSQEECLSWLTLSPVEEHFYQR---QHETCVRDAHEVIESLRNDIL 738
+K + D + LP + L + + E FY + + T R+ E +++ + +
Sbjct: 888 TKGSLLDGKPIISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEA-GTVKQNYV 946
Query: 739 NRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
N +L LL+LRQAC HP
Sbjct: 947 N------------------------ILLMLLRLRQACDHP 962
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 133/300 (44%), Gaps = 60/300 (20%)
Query: 490 SGATLIVCPAPILPQWHDEIIRH-TRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIV 548
+ TLIVCP ++ QW DE+ + T L +Y G T D +LA D+V
Sbjct: 632 AAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTK-------DPHELAKYDVV 684
Query: 549 ITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATA 608
ITTY ++ S R D + F + L ++ W+RV LDEAQ +++ T
Sbjct: 685 ITTYSLV-------SKRKHMDCEPVEF------LSGPLAQVSWFRVVLDEAQSIKNYKTQ 731
Query: 609 ATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIG 668
A+ LH+K WC++GTPIQ + DLY RFLK P+++Y+ + E +++P
Sbjct: 732 ASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPISSYPGE 791
Query: 669 AMEFTHTIFKQIMWRSSKKHVADE---LDLPSQEECLSWLTLSPVEEHFYQRQHETCVRD 725
+ I K++M R +K + D + LP + L + + E FY + C
Sbjct: 792 GYKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEERDFYSKLE--C--- 846
Query: 726 AHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAG-------KLLNALLKLRQACCHP 778
DS D + EAG +L LL+LRQAC HP
Sbjct: 847 ------------------------DSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 882
Score = 84.0 bits (206), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 1466 EKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKA---QVAINQFRGKQNGTKGCEKST 1522
EK +VF+ W +LD+LE ++ I + R G A+ F +T
Sbjct: 1072 EKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDF------------NT 1119
Query: 1523 PKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFI 1582
+ V+++ ++ + GLN++ A HV++++ NP E QAI R HRIGQ + RF
Sbjct: 1120 LPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFT 1179
Query: 1583 VKDTVEDSIYKLNRSR 1598
VKDTVED I L + +
Sbjct: 1180 VKDTVEDRILALQQKK 1195
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 138/331 (41%), Gaps = 78/331 (23%)
Query: 490 SGATLIVCPAPILPQWHDEIIRH-TRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIV 548
+ TLIVCP ++ QW DE+ + T L +Y G T D +LA D+V
Sbjct: 631 AAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTK-------DPHELAKYDVV 683
Query: 549 ITTYDVLKEDLSHDS-DR--------HEGDRHLLRFQKRYPVIPT--------------- 584
ITTY ++ ++ DR H+G + F +P
Sbjct: 684 ITTYSLVSVEVPKQPRDRADEEKGGIHDGGVESVGFGSNKKDLPNSQKKGTKKRKHMDCE 743
Query: 585 -------LLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLY 637
L ++ W+RV LDEAQ +++ T A+ LH+K WC++GTPIQ + DLY
Sbjct: 744 PVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLY 803
Query: 638 GLLRFLKVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADE---LD 694
RFLK P+++Y+ + E +++P + I K++M R +K + D +
Sbjct: 804 SYFRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPVIS 863
Query: 695 LPSQEECLSWLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDP 754
LP + L + + E FY + C DS D
Sbjct: 864 LPPKSIELRRVDFTKEERDFYSKLE--C---------------------------DSRDQ 894
Query: 755 LITHTEAG-------KLLNALLKLRQACCHP 778
+ EAG +L LL+LRQAC HP
Sbjct: 895 FKEYAEAGTVKQNYVNILLMLLRLRQACGHP 925
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 1466 EKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKA---QVAINQFRGKQNGTKGCEKST 1522
EK +VF+ W +LD+LE ++ I + R G A+ F +T
Sbjct: 1115 EKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDF------------NT 1162
Query: 1523 PKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFI 1582
+ V+++ ++ + GLN++ A HV++++ NP E QAI R HRIGQ + RF
Sbjct: 1163 LPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFT 1222
Query: 1583 VKDTVEDSIYKLNRSR 1598
VKDTVED I L + +
Sbjct: 1223 VKDTVEDRILALQQKK 1238
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 140/336 (41%), Gaps = 81/336 (24%)
Query: 490 SGATLIVCPAPILPQWHDEII-RHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIV 548
+ TLIVCPA ++ QW E+ + T L IY G T D +LA D+V
Sbjct: 342 AAGTLIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTK-------DPIELAKYDVV 394
Query: 549 ITTY-----DVLKEDLSHDSDRHEGDRHLLRF-------QKRYPVIPTL----------- 585
+TTY +V K+ L D + E + +KR V+ T
Sbjct: 395 MTTYAIVSNEVPKQPLVDDDENDEKNSEKYGLASGFSINKKRKNVVGTTKKSKKKKGNNN 454
Query: 586 -----------LTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLD 634
L ++ W+RV LDEAQ ++++ T L +K WC++GTPIQ +D
Sbjct: 455 AGDSSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTID 514
Query: 635 DLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADE-- 692
DLY RFLK P+ Y+ + ++ P + + + + + IM R +K + D
Sbjct: 515 DLYSYFRFLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQP 574
Query: 693 -LDLPSQEECLSWLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDS 751
++LP + LS + S E FY + +ES DS
Sbjct: 575 IINLPPKTINLSQVDFSVEERSFYVK------------LES-----------------DS 605
Query: 752 SDPLITHTEAGKL-------LNALLKLRQACCHPQV 780
+ AG L L LL+LRQAC HPQ+
Sbjct: 606 RSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQL 641
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 28/255 (10%)
Query: 1350 DEETCPV--CQEKLGNQRMVFQCGHFTCCKC--LFAMTEQRLQHSKTHNWVMCPTCRQHT 1405
DE+TCP C+E+L + +VF C L + + H K+ Q+
Sbjct: 710 DEDTCPAPRCREQLAHD-VVFSKSTLRSCVADDLGCSSSEDNSHDKS--------VFQNG 760
Query: 1406 DFGN--IAYAVDAQNESSNSSMQHTVDSCEKCETSISVKGSYGTKIEAVT----RRILSI 1459
+F + I +D SN ++ + + +S + VT + S
Sbjct: 761 EFSSSKIKAVLDILQSLSNQGTSNSTQNGQMASSSQQPNDDDDDDDDDVTIVEKTSLKST 820
Query: 1460 KATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGCE 1519
+ K ++FS W +LD++E + N+I F R+ G I + R + E
Sbjct: 821 PSNGGPIKTIIFSQWTGMLDLVELSLIENSIEFRRLDG---TMSLIARDRAVK------E 871
Query: 1520 KSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIH 1579
S ++V+++ ++ G GLN++ A HV+L++ NP E QAI R HRIGQ +
Sbjct: 872 FSNDPDVKVMIMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVT 931
Query: 1580 RFIVKDTVEDSIYKL 1594
R +K+TVED I L
Sbjct: 932 RITIKNTVEDRILAL 946
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 56/300 (18%)
Query: 488 IASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADI 547
++ TLIVCP ++ W ++ HT PG LK +Y G T D+++L DI
Sbjct: 336 VSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTD-------DVNELMKYDI 388
Query: 548 VITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNAT 607
V+TTY L + S + PV ++ W R+ LDEA +++
Sbjct: 389 VLTTYGTLAVEESWEDS---------------PV-----KKMEWLRIILDEAHTIKNANA 428
Query: 608 AATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDI 667
+ + +L + W +TGTPIQ DLY L+ FL+ PF+ +W +++ P +G+
Sbjct: 429 QQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNK 488
Query: 668 GAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHETCVRDAH 727
+ + I R +K+ L + E C ++ LSP E Y +A
Sbjct: 489 KGLSRLQVLMATISLRRTKEKSLIGLPPKTVETC--YVELSPEERQLYDHMEG----EAK 542
Query: 728 EVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQAC-----CHPQVGS 782
V+++L N+ GS N S+ +L+ +L+LRQ C C P++ S
Sbjct: 543 GVVQNLINN-------GSLMRNYST-----------VLSIILRLRQLCDDMSLCPPELRS 584
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 145/313 (46%), Gaps = 39/313 (12%)
Query: 1320 LESPDSSSFIQETTKISNTKEEKGALISKTDEETCPVCQEKLGNQRMVFQCGHFTCCKCL 1379
L S +S+ +++ T ++ A + ++ CP+C N ++ +C H C C+
Sbjct: 582 LRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNI-IITRCAHIFCRACI 640
Query: 1380 FAMTEQRLQHSKTHNWVMCPTCRQHTDFGNIAYAVDAQNESSNSSMQHTVDSCEKCETSI 1439
Q LQ SK +CP CR ++ A +SSN+ +
Sbjct: 641 L----QTLQRSKP----LCPLCRGSLTQSDLYNAPPPPPDSSNTDGED------------ 680
Query: 1440 SVKGSYGTKIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGG- 1498
+ + +K+ A+ +++ + + K +VFS + +L +LE A T +R+ G
Sbjct: 681 AKSSTKSSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAM 740
Query: 1499 --RKAQVAINQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLN 1556
+K I +F E + P VLL ++ G+NL A V L +P N
Sbjct: 741 TVKKRTQVIGEFGNP-------ELTGPV---VLLASLKASGTGINLTAASRVYLFDPWWN 790
Query: 1557 PAAEAQAISRVHRIGQKNKTLIHRFIVKDTVEDSIYKLNRSR---SNHSFISGNTKNQDQ 1613
PA E QA+ R+HRIGQK + + R I ++++E+ + +L + + +N +F + +D+
Sbjct: 791 PAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAF--KRRQKKDE 848
Query: 1614 PVLTLKDVESLLS 1626
+ ++DV +L+S
Sbjct: 849 REVNVEDVVALMS 861
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 58/296 (19%)
Query: 490 SGATLIVCPAPILPQWHDEII-RHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIV 548
SG TLIVCPA ++ QW E+ + + L ++ G T D +++A D+V
Sbjct: 114 SGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTK-------DPTEIAIYDVV 166
Query: 549 ITTYDVLKEDLSHDS--DRHEGDRHLLRFQKRYPVIPTL--LTRIYWWRVCLDEAQMVES 604
+TTY ++ ++ + +R++ R + P + L R+ W RV LDEA +++
Sbjct: 167 MTTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKN 226
Query: 605 NATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEK 664
+ T + L +K WC+TGTPI+ K+DDLY RFL+ P+ + + ++ P +K
Sbjct: 227 HRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDK 286
Query: 665 GDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHETCVR 724
+ + I + IM R +K E FY++
Sbjct: 287 KPLHGYKKLQAILRGIMLRRTK------------------------EWSFYRKLE----- 317
Query: 725 DAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHPQV 780
LN + E D + H LL LL+LRQAC HPQ+
Sbjct: 318 -------------LNSRWKFEEYAADGT----LHEHMAYLLVMLLRLRQACNHPQL 356
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 1529 LLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVKDTVE 1588
+L+ ++ G GLN++ A HV+L++ NP E QAI R HRIGQ + R +K+TVE
Sbjct: 510 MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVE 569
Query: 1589 DSIYKLNRSRSN 1600
+ I L+ + N
Sbjct: 570 ERILTLHERKRN 581
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 81/336 (24%)
Query: 490 SGATLIVCPAPILPQWHDEIIRHTRPGS-LKTCIYEGVRDTSFSNTSLMDISDLASADIV 548
+ TLIVCPA ++ QW E+ S L +Y G T D ++LA D+V
Sbjct: 413 AAGTLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTK-------DPNELAEYDVV 465
Query: 549 ITTYDVLKEDLSH-------DSDRHEGDRHLL-----RFQKRYPVIPT------------ 584
+TTY ++ + + ++D DR+ L +KR V+
Sbjct: 466 VTTYAIVTNEAPNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKST 525
Query: 585 ----------LLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLD 634
L ++ W+R+ LDEAQ +++ T L +K WC++GTPIQ +D
Sbjct: 526 NDTSSEPDCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTID 585
Query: 635 DLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADE-- 692
DLY RFL+ P+ Y+ + ++ P + + + + IM R +K + D
Sbjct: 586 DLYSYFRFLRYDPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKP 645
Query: 693 -LDLPSQEECLSWLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDS 751
++LP + LS + S E FY++ +E+ DS
Sbjct: 646 IINLPPKVVNLSQVDFSVAERSFYKK------------LEA-----------------DS 676
Query: 752 SDPLITHTEAGKLLNALLKLR-------QACCHPQV 780
+ +AG L + QAC HPQ+
Sbjct: 677 RSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQL 712
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 38/257 (14%)
Query: 1350 DEETCPV--CQEKLGNQRMVFQCGHFTCCKCLFAMTEQRLQHSKTHNWVMCPTCRQHTDF 1407
DE TCPV C+++L + +VF C T S +H+ + + Q DF
Sbjct: 782 DENTCPVPRCKQQLA-RDVVFSESSLRNC------TSDDSGCSSSHDNGLDRSVFQKRDF 834
Query: 1408 --GNIAYAVD-----AQNESSNSSMQHTVDSCEKCETSISVKGSYGTKIEAVTRRILSIK 1460
I +D +Q +S NS+ + S + V T +E + R+ S
Sbjct: 835 CSSKIKAVLDILQSLSQPDSPNSAQHGQMPSSSRPYDDDDV-----TIVEPM--RLHSSS 887
Query: 1461 ATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQV---AINQFRGKQNGTKG 1517
+ K ++FS W +LD++E + I F R+ G A+ +F K +
Sbjct: 888 PSQGAVKTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPD---- 943
Query: 1518 CEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTL 1577
++V+L+ ++ G GLN++ A HV+L++ NP E QAI R HRIGQ
Sbjct: 944 --------VKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVT 995
Query: 1578 IHRFIVKDTVEDSIYKL 1594
+ R +KDTVED I KL
Sbjct: 996 VTRITIKDTVEDRILKL 1012
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 1351 EETCPVCQEKLGNQRMVFQCGHFTCCKCLFAMTEQRLQHSKTHNWVMCPTCRQ--HTDFG 1408
E+ C +C + +V C H C CL S + V CPTC + D+
Sbjct: 576 EQECGLCHDP-AEDYVVTSCAHVFCKACLIGF-------SASLGKVTCPTCSKLLTVDWT 627
Query: 1409 NIAYAVDAQNESSNSSMQHTVDSCEKCETSISVKGSYGTKIEAVTRRILSIKATDHKEKV 1468
A D ++++S ++++ S + TKIEA+ I + D K
Sbjct: 628 TKA---DTEHKASKTTLKGFRASSILNRIKLD-DFQTSTKIEALREEIRFMVERDGSAKA 683
Query: 1469 LVFSSWNDVLDVLEHAFAANNITFVRMKGGRKA---QVAINQFRGKQNGTKGCEKSTPKS 1525
+VFS + LD++ + ++ V++ G AIN+F K P
Sbjct: 684 IVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKF-----------KEDP-D 731
Query: 1526 IQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVKD 1585
+V L+ ++ G LNL A HV +++P NPA E QA R+HRIGQ + RFI+++
Sbjct: 732 CRVFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIEN 791
Query: 1586 TVEDSIYKLNRSR 1598
TVE+ I +L + +
Sbjct: 792 TVEERILRLQKKK 804
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 93/239 (38%), Gaps = 75/239 (31%)
Query: 584 TLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFL 643
+LL + W R+ LDEA ++ + L + + W ++GTP+Q ++ +LY L+RFL
Sbjct: 347 SLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLIRFL 406
Query: 644 KVSPFNTYR-----------------------------WWAEVLRDP------YEKGDIG 668
++ P++ Y WW + + P + G
Sbjct: 407 QIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSFGLGKRA 466
Query: 669 AMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHETCVRDAHE 728
+ H + K I+ R +K A +L LP +
Sbjct: 467 MILLKHKVLKDILLRRTKLGRAADLALPPR------------------------------ 496
Query: 729 VIESLRNDILN-RKVPGSESL-NDSSDPLITHTEAGKLLN-------ALLKLRQACCHP 778
I +LR D L+ ++ ESL +S T+ EAG L+N L +LRQA HP
Sbjct: 497 -IITLRRDTLDVKEFDYYESLYKNSQAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHP 554
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 489 ASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIV 548
A+G TL++CP + QW +EI R T PGS K +Y G + +I + + D V
Sbjct: 192 AAGCTLVLCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAK-------NIKEFMNYDFV 244
Query: 549 ITTYDVLKED 558
+TTY ++ +
Sbjct: 245 LTTYSTVESE 254
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 81/157 (51%), Gaps = 15/157 (9%)
Query: 1447 TKIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKA---QV 1503
TKIEA+ I + D K +VFS + LD++ +A + ++ V++ G
Sbjct: 507 TKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDA 566
Query: 1504 AINQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQA 1563
A+ F+ + + C +VLL+ +Q G LNL A HV +++P NPA E QA
Sbjct: 567 ALKNFKEEPD----C--------RVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQA 614
Query: 1564 ISRVHRIGQKNKTLIHRFIVKDTVEDSIYKLNRSRSN 1600
R+HRIGQ + RFI++ TVE+ I L + + +
Sbjct: 615 QDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKKED 651
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 56/302 (18%)
Query: 489 ASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIV 548
A G TL++ P L QW DEI R T PGS + Y G + ++ L + D V
Sbjct: 188 AVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDK-------NVQKLMNYDFV 240
Query: 549 ITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATA 608
+TT +++ + D EG + + L I W R+ +DEA +++ ++
Sbjct: 241 LTTSPIVENEYRKD----EGVDETM----------SPLHSIKWNRIIVDEAHDIKNRSSR 286
Query: 609 ATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIG 668
+ L + + W ++GTP+Q +D+LY L+ + ++ F Y +A
Sbjct: 287 TAKAVFALEATYRWALSGTPLQNDVDELYSLVSYSFLNFF--YSTYASF----------- 333
Query: 669 AMEFTHTIF-KQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHETCVRDAH 727
A TH F + + + L +P + E + + + + ++ RDA
Sbjct: 334 AFRHTHITFARNVTVKFLIGGNILPLSIPVRIENVPAVLIMQINTSLGGKR-----RDAL 388
Query: 728 EVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLN-------ALLKLRQACCHPQV 780
V+E+ D S++ D + +AG L+N L++LRQA HP +
Sbjct: 389 SVVEA---DFYESLYKVSKTTFDG------YIQAGTLMNNYAHIFGLLIRLRQAVDHPYL 439
Query: 781 GS 782
S
Sbjct: 440 VS 441
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative |
chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 16/154 (10%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVA 1504
K++ + + ++ +K H+ VL+++ + L +LE F N + R+ G G + QV
Sbjct: 525 KLQLLDKMMVKLKEQGHR--VLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVR 582
Query: 1505 INQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAI 1564
I++F +N + C LL + G G+NL A V++ + NP A+ QA+
Sbjct: 583 IDRFNA-ENSNRFC----------FLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAM 631
Query: 1565 SRVHRIGQKNKTLIHRFIVKDTVEDSIYKLNRSR 1598
+RVHR+GQ NK +I+R I K TVE+ + ++ +++
Sbjct: 632 ARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNK 665
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 67/312 (21%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIY-EGVRDTSF----SNTSLMDISDLASA 545
G L+V PA +L W DEI R LKT Y G+++ + N M D A
Sbjct: 636 GPFLVVAPASVLNNWADEISRFC--PDLKTLPYWGGLQERTILRKNINPKRMYRRD-AGF 692
Query: 546 DIVITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESN 605
I+IT+Y +L D + R+ W + LDEAQ ++S+
Sbjct: 693 HILITSYQLLVTDEKY------------------------FRRVKWQYMVLDEAQAIKSS 728
Query: 606 ATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTY----RWWAEVLRDP 661
++ + L + ++ +TGTPIQ + +L+ LL F+ F+ + W+++ + +
Sbjct: 729 SSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENH 788
Query: 662 YEKGDI---GAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQ 718
E G + H I K M R KK V EL ++ E LS ++ FYQ
Sbjct: 789 AEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELT--TKTEVTVHCKLSSRQQAFYQ-- 844
Query: 719 HETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
+++N I L DS+ T + L+N +++LR+ C HP
Sbjct: 845 -------------AIKNKI------SLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHP 885
Query: 779 QV-----GSSGL 785
++ GSS L
Sbjct: 886 ELFERNEGSSYL 897
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 1459 IKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGC 1518
++A +H+ VL+F+ +L++LE ++R+ G + R Q+ +
Sbjct: 1218 LRAGNHR--VLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRS--- 1272
Query: 1519 EKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLI 1578
I V LL + G G+NL A V+ E NP + QA+ R HR+GQ +
Sbjct: 1273 ------DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTV 1326
Query: 1579 HRFIVKDTVEDSI-YKLNRSRSNHSFISGNTKNQDQPVLTLKDVESLL 1625
+R I K+TVE+ I ++ ++ + + Q L DV SLL
Sbjct: 1327 YRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLL 1374
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative |
chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 16/154 (10%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVA 1504
K++ + + ++ +K H+ VL+++ + L +LE F N + R+ G G + QV
Sbjct: 484 KLQLLDKMMVKLKEQGHR--VLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVR 541
Query: 1505 INQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAI 1564
I++F +N + C LL + G G+NL A V++ + NP A+ QA+
Sbjct: 542 IDRFNA-ENSNRFC----------FLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAM 590
Query: 1565 SRVHRIGQKNKTLIHRFIVKDTVEDSIYKLNRSR 1598
+RVHR+GQ NK +I+R I K TVE+ + ++ +++
Sbjct: 591 ARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNK 624
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 83/154 (53%), Gaps = 16/154 (10%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVA 1504
K++ + + ++ +K H+ VL+++ + +LD+LE + R+ G G + Q+
Sbjct: 596 KLQLLDKMMVKLKEQGHR--VLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIR 653
Query: 1505 INQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAI 1564
I++F K N K C LL + G G+NL A V++ + NP A+ QA+
Sbjct: 654 IDRFNAK-NSNKFC----------FLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAM 702
Query: 1565 SRVHRIGQKNKTLIHRFIVKDTVEDSIYKLNRSR 1598
+R HR+GQ NK +I+R I + T+E+ + +L + +
Sbjct: 703 ARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKK 736
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 584 TLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFL 643
+L I W + +DE +++ + + S H +TGTP+Q LD+L+ L+ FL
Sbjct: 409 AVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFL 468
Query: 644 KVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLS 703
F + + E +D ++ I + H + + R KK V D+P ++E +
Sbjct: 469 DAGKFGSLEEFQEEFKDINQEEQISRL---HKMLAPHLLRRVKKDVMK--DMPPKKELIL 523
Query: 704 WLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGK 763
+ LS +++ +Y+ I + +L +K SLN
Sbjct: 524 RVDLSSLQKEYYK------------AIFTRNYQVLTKKGGAQISLN-------------- 557
Query: 764 LLNALLKLRQACCHP 778
N +++LR+ CCHP
Sbjct: 558 --NIMMELRKVCCHP 570
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 1458 SIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKA---QVAINQFRGKQNG 1514
S+K + H+ VL+FS W +LD+LE +T+ R+ G + Q ++ F
Sbjct: 599 SMKKSGHR--VLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTF------ 650
Query: 1515 TKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKN 1574
+ KSI LL + G GLNL A V++ + NP + QA R HRIGQ
Sbjct: 651 ------NNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTK 704
Query: 1575 KTLIHRFIVKDTVEDSIYKLNRSR 1598
I R + K TV+++IY++ + +
Sbjct: 705 PVTIFRLVTKSTVDENIYEIAKRK 728
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 129/320 (40%), Gaps = 50/320 (15%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEG-------------VRDTSFSNTSLM 537
G L+V PA +L W DEI R LKT Y G + F +T ++
Sbjct: 636 GPFLVVAPASVLNNWADEISRFC--PDLKTLPYWGGLQERTILRKNINPKRVMFFSTWII 693
Query: 538 DISDLASADIVITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLD 597
A I I SD G L+ + R+ W + LD
Sbjct: 694 SFDPWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLD 753
Query: 598 EAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTY----RW 653
EAQ ++S+++ + L + ++ +TGTPIQ + +L+ LL F+ F+ + W
Sbjct: 754 EAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEW 813
Query: 654 WAEVLRDPYEKGDI---GAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPV 710
+++ + + E G + H I K M R KK V EL ++ E LS
Sbjct: 814 FSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELT--TKTEVTVHCKLSSR 871
Query: 711 EEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLK 770
++ FYQ +++N I L DS+ T + L+N +++
Sbjct: 872 QQAFYQ---------------AIKNKI------SLAELFDSNRGQFTDKKVLNLMNIVIQ 910
Query: 771 LRQACCHPQV-----GSSGL 785
LR+ C HP++ GSS L
Sbjct: 911 LRKVCNHPELFERNEGSSYL 930
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 1459 IKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGC 1518
++A +H+ VL+F+ +L++LE ++R+ G + R Q+ +
Sbjct: 1251 LRAGNHR--VLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRS--- 1305
Query: 1519 EKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLI 1578
I V LL + G G+NL A V+ E NP + QA+ R HR+GQ +
Sbjct: 1306 ------DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTV 1359
Query: 1579 HRFIVKDTVEDSI-YKLNRSRSNHSFISGNTKNQDQPVLTLKDVESLL 1625
+R I K+TVE+ I ++ ++ + + Q L DV SLL
Sbjct: 1360 YRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLL 1407
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 21/175 (12%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQ 1507
K+E + R + +KATDH+ VL FS+ +LDV+E ++R+ G Q
Sbjct: 1074 KLEMLDRMLPKLKATDHR--VLFFSTMTRLLDVMEDYLTLKGYKYLRLDG---------Q 1122
Query: 1508 FRGKQNGT--KGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAIS 1565
G G G KS + LL I+ G G+NL A V+L + NP + QA +
Sbjct: 1123 TSGGDRGALIDGFNKSG-SPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQA 1181
Query: 1566 RVHRIGQKNKTLIHRFIVKDTVEDSI-----YKLNRSRSN--HSFISGNTKNQDQ 1613
R HRIGQK L+ RF ++VE+ + +KL + + F NT +D+
Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR 1236
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIVIT 550
G L+V P+ +LP W EI + S+ +Y G D + L IV
Sbjct: 804 GPFLVVVPSSVLPGWQSEI--NFWAPSIHKIVYCGTPD---------ERRKLFKEQIVHQ 852
Query: 551 TYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAAT 610
++VL + ++H+ + L++I+W + +DE ++ NA+
Sbjct: 853 KFNVLLTTYEYLMNKHDRPK---------------LSKIHWHYIIIDEGHRIK-NASCKL 896
Query: 611 EMALRLH-SKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYE 663
L+ + S H +TGTP+Q L++L+ LL FL + FN+ +++ P++
Sbjct: 897 NADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQ 950
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 21/175 (12%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQ 1507
K+E + R + +KATDH+ VL FS+ +LDV+E ++R+ G Q
Sbjct: 1074 KLEMLDRMLPKLKATDHR--VLFFSTMTRLLDVMEDYLTLKGYKYLRLDG---------Q 1122
Query: 1508 FRGKQNGT--KGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAIS 1565
G G G KS + LL I+ G G+NL A V+L + NP + QA +
Sbjct: 1123 TSGGDRGALIDGFNKSG-SPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQA 1181
Query: 1566 RVHRIGQKNKTLIHRFIVKDTVEDSI-----YKLNRSRSN--HSFISGNTKNQDQ 1613
R HRIGQK L+ RF ++VE+ + +KL + + F NT +D+
Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR 1236
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIVIT 550
G L+V P+ +LP W EI + S+ +Y G D + L IV
Sbjct: 804 GPFLVVVPSSVLPGWQSEI--NFWAPSIHKIVYCGTPD---------ERRKLFKEQIVHQ 852
Query: 551 TYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAAT 610
++VL + ++H+ + L++I+W + +DE ++ NA+
Sbjct: 853 KFNVLLTTYEYLMNKHDRPK---------------LSKIHWHYIIIDEGHRIK-NASCKL 896
Query: 611 EMALRLH-SKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYE 663
L+ + S H +TGTP+Q L++L+ LL FL + FN+ +++ P++
Sbjct: 897 NADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQ 950
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 21/175 (12%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQ 1507
K+E + R + +KATDH+ VL FS+ +LDV+E ++R+ G Q
Sbjct: 1074 KLEMLDRMLPKLKATDHR--VLFFSTMTRLLDVMEDYLTLKGYKYLRLDG---------Q 1122
Query: 1508 FRGKQNGT--KGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAIS 1565
G G G KS + LL I+ G G+NL A V+L + NP + QA +
Sbjct: 1123 TSGGDRGALIDGFNKSG-SPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQA 1181
Query: 1566 RVHRIGQKNKTLIHRFIVKDTVEDSI-----YKLNRSRSN--HSFISGNTKNQDQ 1613
R HRIGQK L+ RF ++VE+ + +KL + + F NT +D+
Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR 1236
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIVIT 550
G L+V P+ +LP W EI + S+ +Y G D + L IV
Sbjct: 804 GPFLVVVPSSVLPGWQSEI--NFWAPSIHKIVYCGTPD---------ERRKLFKEQIVHQ 852
Query: 551 TYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAAT 610
++VL + ++H+ + L++I+W + +DE ++ NA+
Sbjct: 853 KFNVLLTTYEYLMNKHDRPK---------------LSKIHWHYIIIDEGHRIK-NASCKL 896
Query: 611 EMALRLH-SKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYE 663
L+ + S H +TGTP+Q L++L+ LL FL + FN+ +++ P++
Sbjct: 897 NADLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQ 950
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGCEKSTPKSI 1526
+VL+FS +L++++ + +N +F+R+ G KA + Q G
Sbjct: 750 RVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEG---------HVA 800
Query: 1527 QVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVKDT 1586
+ LL Q G GL L +A V++V+P NP+ + Q++ R +RIGQ +++R + T
Sbjct: 801 PIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSAT 860
Query: 1587 VEDSIYK 1593
VE+ IY+
Sbjct: 861 VEEKIYR 867
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 34/178 (19%)
Query: 473 VCQMCSELIQATESPIASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFS 532
Q+CS L S + A L+V P +LP W E+ T S T Y G T
Sbjct: 409 TMQICSFLAGLFHSKLIKRA-LVVAPKTLLPHWMKELA--TVGLSQMTREYYGT-STKAR 464
Query: 533 NTSLMDISDLASADIVITTYDVLK--------EDLSHDSDRHEGDRHLLRFQKRYPVIPT 584
L I L I++TTYD+++ +D D D +G++
Sbjct: 465 EYDLHHI--LQGKGILLTTYDIVRNNTKALQGDDHYTDEDDEDGNK-------------- 508
Query: 585 LLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRF 642
W + LDE ++++ T + L + S H I+GTPIQ L +L+ L F
Sbjct: 509 ------WDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFNF 560
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 56/299 (18%)
Query: 493 TLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIVITTY 552
++IVCP+ ++ W EI ++ L Y G ++ SL + + +++IT+Y
Sbjct: 1540 SIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVG---SAQDRVSLRE--QFNNHNVIITSY 1594
Query: 553 DVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAATEM 612
DV+++D+ + LT+ W LDE ++++ + T
Sbjct: 1595 DVVRKDVDY------------------------LTQFSWNYCILDEGHIIKNAKSKITAA 1630
Query: 613 ALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAE-------VLRDPY--- 662
+L ++H ++GTPIQ + +L+ L FL T R + RDP
Sbjct: 1631 VKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSA 1690
Query: 663 --EKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHE 720
+ + AME H + R +K+ V DLP + + LSPV+ Y++
Sbjct: 1691 KDAEAGVLAMEALHKQVMPFLLRRTKEEVLS--DLPEKIIQDRYCDLSPVQLKLYEQFSG 1748
Query: 721 TCVRDAHEVIESLRNDILNRKVPGS-ESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
+ A + I S+ KV GS +S N P T + L LLKL C HP
Sbjct: 1749 SS---AKQEISSI------IKVDGSADSGNADVAPTKASTHVFQALQYLLKL---CSHP 1795
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 1465 KEKVLVFSSWNDVLDVLEH-AFAAN--NITFVRMKGGRKAQVAINQFRGKQNGTKGCEKS 1521
+ +VL+F+ +LD++E F A+ ++T++R+ G + K+ S
Sbjct: 1861 QHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPE--------KRFEIVKAFNS 1912
Query: 1522 TPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRF 1581
P +I VLLL G GLNL A +V +E NP + QA+ R HR+GQK +HR
Sbjct: 1913 DP-TIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRL 1971
Query: 1582 IVKDTVEDSIYKLNRSRS-------NHSFISGNTKNQDQ 1613
I++ T+E+ + L + + N S T N DQ
Sbjct: 1972 IMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQ 2010
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 56/299 (18%)
Query: 493 TLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIVITTY 552
++IVCP+ ++ W EI ++ L Y G ++ SL + + +++IT+Y
Sbjct: 1509 SIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVG---SAQDRVSLRE--QFNNHNVIITSY 1563
Query: 553 DVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAATEM 612
DV+++D+ + LT+ W LDE ++++ + T
Sbjct: 1564 DVVRKDVDY------------------------LTQFSWNYCILDEGHIIKNAKSKITAA 1599
Query: 613 ALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAE-------VLRDPY--- 662
+L ++H ++GTPIQ + +L+ L FL T R + RDP
Sbjct: 1600 VKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSA 1659
Query: 663 --EKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHE 720
+ + AME H + R +K+ V DLP + + LSPV+ Y++
Sbjct: 1660 KDAEAGVLAMEALHKQVMPFLLRRTKEEVLS--DLPEKIIQDRYCDLSPVQLKLYEQFSG 1717
Query: 721 TCVRDAHEVIESLRNDILNRKVPGS-ESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
+ A + I S+ KV GS +S N P T + L LLKL C HP
Sbjct: 1718 SS---AKQEISSI------IKVDGSADSGNADVAPTKASTHVFQALQYLLKL---CSHP 1764
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 1465 KEKVLVFSSWNDVLDVLEH-AFAAN--NITFVRMKGGRKAQVAINQFRGKQNGTKGCEKS 1521
+ +VL+F+ +LD++E F A+ ++T++R+ G + K+ S
Sbjct: 1830 QHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPE--------KRFEIVKAFNS 1881
Query: 1522 TPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRF 1581
P +I VLLL G GLNL A +V +E NP + QA+ R HR+GQK +HR
Sbjct: 1882 DP-TIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRL 1940
Query: 1582 IVKDTVEDSIYKLNRSRS-------NHSFISGNTKNQDQ 1613
I++ T+E+ + L + + N S T N DQ
Sbjct: 1941 IMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQ 1979
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVAINQFRGKQNGTKGCEKSTP 1523
+VL+FS +LD+LE AN ++ RM G ++ I++F ++
Sbjct: 745 RVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSED---------- 794
Query: 1524 KSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1583
+ V +L + G G NL A V++ +P NP+ + QA R RIGQK ++R I
Sbjct: 795 --MFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLIT 852
Query: 1584 KDTVEDSIY 1592
+ T+E+ +Y
Sbjct: 853 RGTIEEKVY 861
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 16/139 (11%)
Query: 1457 LSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKA---QVAINQFRGKQN 1513
L ++ + K +VL+FS +LD+L + F R+ G KA Q A++ F
Sbjct: 947 LLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHF----- 1001
Query: 1514 GTKGCEKSTPKSIQVLLLL-IQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQ 1572
+ P S LL + G G+NL A VV+ + NP + QA+SR HRIGQ
Sbjct: 1002 -------NAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQ 1054
Query: 1573 KNKTLIHRFIVKDTVEDSI 1591
+ I+RF+ +VE+ I
Sbjct: 1055 QEVVNIYRFVTSKSVEEEI 1073
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 65/295 (22%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDT-----SFSNTSLMDISDLASA 545
G L+V P L W E R PG + +Y G R + + + +
Sbjct: 675 GPFLVVVPLSTLANWAKEF-RKWLPG-MNIIVYVGTRASREVCQQYEFYNEKKVGRPIKF 732
Query: 546 DIVITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESN 605
+ ++TTY+V+ +D +L++I W + +DEA ++++
Sbjct: 733 NALLTTYEVVLKD------------------------KAVLSKIKWIYLMVDEAHRLKNS 768
Query: 606 ATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRD--PYE 663
L +K+ ITGTP+Q +++L+ LL FL F + E ++ +
Sbjct: 769 EAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFN 828
Query: 664 KGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQHETCV 723
+ ++ + H + + R K V E LP + E + + +SP+++ +Y+ E
Sbjct: 829 ESELANL---HLELRPHILRRVIKDV--EKSLPPKIERILRVEMSPLQKQYYKWILE--- 880
Query: 724 RDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
R+ H+ LN+ V G++ LLN +++L++ C HP
Sbjct: 881 RNFHD---------LNKGVRGNQV---------------SLLNIVVELKKCCNHP 911
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 20/160 (12%)
Query: 1465 KEKVLVFSSWNDVLD-VLEHAFAANNIT----FVRMKGG---RKAQVAINQFRGKQNGTK 1516
KEKVLV+S + D L ++E A + T + M G R Q I+ F +G+K
Sbjct: 943 KEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSK 1002
Query: 1517 GCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKT 1576
VLL + + G++L+ A VV+++ + NP+ E+QAISR RIGQK
Sbjct: 1003 -----------VLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAV 1051
Query: 1577 LIHRFIVKDTVEDSIY-KLNRSRSNHSFISGNTKNQDQPV 1615
I+ +VKDT E + Y K + + +T +D+P+
Sbjct: 1052 FIYHLMVKDTSEWNKYCKQSEKHRISELVFSSTNEKDKPI 1091
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 25/145 (17%)
Query: 1464 HKE--KVLVFSSWNDVLDVLEHAFAANNI-----TFVRMKGGRKA---QVAINQFRGKQN 1513
HKE +VL+FS +LD+LE NI TF R+ G Q AI +F +N
Sbjct: 1017 HKEGHRVLIFSQMTKLLDILEDYL---NIEFGPKTFERVDGSVAVADRQAAIARFNQDKN 1073
Query: 1514 GTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQK 1573
V LL + G+NL A V++ + NP A+ QA++R HRIGQ
Sbjct: 1074 RF------------VFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQS 1121
Query: 1574 NKTLIHRFIVKDTVEDSIYKLNRSR 1598
+ L++R +V+ +VE+ I +L + +
Sbjct: 1122 KRLLVYRLVVRASVEERILQLAKKK 1146
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKGG---RKAQVAINQFRGKQNGTKGCEKSTP 1523
+ L+F+ +LDVLE T++R+ G + Q + +F + P
Sbjct: 1093 RALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRF-----------NTNP 1141
Query: 1524 KSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1583
K I + +L + G G+NL+ A V+ + NPA + QA R HRIGQ + I+R I
Sbjct: 1142 K-IFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLIS 1200
Query: 1584 KDTVEDSIY-KLNRSRSNHSFISGNTKNQDQPVLTLKDVESLLSRTPVTMPESDEN---- 1638
+ T+E++I K N+ R + + N + + L +E +T + E
Sbjct: 1201 ESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSGHKALTTKDEKETSKHC 1260
Query: 1639 ----PIANADL 1645
P++NAD+
Sbjct: 1261 GADIPLSNADV 1271
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 39/234 (16%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEG-VRDTSFSNTSLMDISDLASADIVI 549
G LIV P ++ W E ++ + K Y G ++ M L S + I
Sbjct: 586 GPHLIVVPTSVMLNWETEFLKWC--PAFKILTYFGSAKERKLKRQGWMK---LNSFHVCI 640
Query: 550 TTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAA 609
TTY ++ +D + R W + LDEA ++++ +
Sbjct: 641 TTYRLVIQD------------------------SKMFKRKKWKYLILDEAHLIKNWKSQR 676
Query: 610 TEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPY------- 662
+ L +SK +TGTP+Q L +L+ L+ FL F +++ + + +P
Sbjct: 677 WQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQ 736
Query: 663 EKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQ 716
EK + ++ H + + + R K+ V E LPS+ E + + LS + + Y+
Sbjct: 737 EKINKEVIDRLHNVLRPFLLRRLKRDV--EKQLPSKHEHVIFCRLSKRQRNLYE 788
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1 |
chromatin remodeling 1 | chr5:26649050-26652869 FORWARD
LENGTH=764
Length = 764
Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 16/191 (8%)
Query: 1461 ATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGCEK 1520
A +HK VL+FS W +LD++++ F+ R+ G K Q + + C
Sbjct: 538 ANNHK--VLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSC-- 593
Query: 1521 STPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHR 1580
+ LL + G G+NL A +L + NP + QA+ R HRIGQ ++R
Sbjct: 594 ------SIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR 647
Query: 1581 FIVKDTVEDSIYK--LNRSRSNHSFISGNTKNQDQP----VLTLKDVESLLSRTPVTMPE 1634
++E + K ++ + H I +Q++ L +D+ +LL +
Sbjct: 648 LSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLKEDETAEDK 707
Query: 1635 SDENPIANADL 1645
+ I++ADL
Sbjct: 708 LIQTDISDADL 718
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 115/302 (38%), Gaps = 62/302 (20%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFS-NTSLMDISDLASADIVI 549
G L++ P L W +EI R T S+ IY G ++ M + IVI
Sbjct: 251 GPYLVIAPLSTLSNWFNEIARFT--PSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVI 308
Query: 550 TTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAA 609
T+Y+V D R + YP W V +DE ++++
Sbjct: 309 TSYEVAMNDAK-------------RILRHYP----------WKYVVIDEGHRLKNHKCKL 345
Query: 610 TEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTY----RWW-------AEVL 658
L + +TGTP+Q L +L+ LL F+ F ++ W+ E
Sbjct: 346 LRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEAT 405
Query: 659 RDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQRQ 718
++ EK + H I + + R K V EL LP ++E + + T++ ++ F +
Sbjct: 406 KEEEEKRRAQVVSKLHGILRPFILRRMKCDV--ELSLPRKKEIIMYATMTDHQKKFQE-- 461
Query: 719 HETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
H V +L + + G GKL N +++LR+ C HP
Sbjct: 462 --------HLVNNTLEAHLGENAIRG-------------QGWKGKLNNLVIQLRKNCNHP 500
Query: 779 QV 780
+
Sbjct: 501 DL 502
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 1452 VTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGG---RKAQVAINQF 1508
V R+L+ +++++ S++ LD+ F+R+ G K Q +N+
Sbjct: 536 VLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRL 595
Query: 1509 RGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVH 1568
K LL + G GLNL+ A +VL +P NPA + QA +RV
Sbjct: 596 -----------NDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVW 644
Query: 1569 RIGQKNKTLIHRFIVKDTVEDSIYKLNRSR 1598
R GQK + ++RF+ T+E+ +Y+ S+
Sbjct: 645 RDGQKKRVYVYRFLSTGTIEEKVYQRQMSK 674
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 1452 VTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGG---RKAQVAINQF 1508
V R+L+ +++++ S++ LD+ F+R+ G K Q +N+
Sbjct: 538 VLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRL 597
Query: 1509 RGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVH 1568
K LL + G GLNL+ A +VL +P NPA + QA +RV
Sbjct: 598 -----------NDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVW 646
Query: 1569 RIGQKNKTLIHRFIVKDTVEDSIYKLNRSR 1598
R GQK + ++RF+ T+E+ +Y+ S+
Sbjct: 647 RDGQKKRVYVYRFLSTGTIEEKVYQRQMSK 676
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 28/204 (13%)
Query: 1402 RQHTDFGNIAYAVDAQNESSNSSMQHTVDSCEKC--ETSISVKGSYGT-----------K 1448
+Q TD G + + + S+Q+ KC + V G Y K
Sbjct: 658 KQVTDMGRVGLQTGS---GKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGK 714
Query: 1449 IEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQF 1508
E + R + ++ H+ +L+FS ++DVLE N+ ++R+ G K
Sbjct: 715 FELLDRLLPKLRKAGHR--ILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTD------ 766
Query: 1509 RGKQNGTKGCEKSTPKSIQVLLLL-IQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRV 1567
Q G + + P S + LL + G GLNL A V++ + NP + QA R
Sbjct: 767 ---QRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRA 823
Query: 1568 HRIGQKNKTLIHRFIVKDTVEDSI 1591
HRIGQK + + + +VE+ I
Sbjct: 824 HRIGQKKEVRVFVLVSVGSVEEVI 847
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 127/335 (37%), Gaps = 78/335 (23%)
Query: 473 VCQMCSELIQATESPIASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFS 532
Q S + E+ G LIV P +LP W +E T S+ +Y+G + +
Sbjct: 435 TIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFA--TWVPSIAAFLYDGRLEERKA 492
Query: 533 NTSLMDISDLASADIVITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWW 592
I+ +++IT YD++ D L +I W+
Sbjct: 493 IRE--KIAGEGKFNVLITHYDLIMRD------------------------KAFLKKIEWY 526
Query: 593 RVCLDEAQMVESNATAATEMALRLHS-KHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTY 651
+ +DE ++++ +A + L + K +TGTPIQ L +L+ LL FL FN+
Sbjct: 527 YMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSV 586
Query: 652 RWWAEVLRDPYEKGDIGAMEFT-----------HTIFKQIMWRSSKKHVADELDLPSQEE 700
+ + E P+ D G + T H + + + R K V E LP + +
Sbjct: 587 QNFEEWFNAPF--ADRGNVSLTDEEELLIIHRLHHVIRPFILRRKKDEV--EKFLPGKTQ 642
Query: 701 CLSWLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTE 760
+ +S ++ +Y++ V D V T
Sbjct: 643 VILKCDMSAWQKVYYKQ-----VTDMGRV--------------------------GLQTG 671
Query: 761 AGK---LLNALLKLRQACCHPQVGSSGLRSLQQSP 792
+GK L N ++LR+ C HP + G ++ + P
Sbjct: 672 SGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKP 706
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 1466 EKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKA---QVAINQFRGKQNGTKGCEKST 1522
+K+L+FS +LD+LE +F R+ G Q ++ F ++
Sbjct: 545 DKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDF-----------NAS 593
Query: 1523 PKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFI 1582
P S QV L+ + G GLNL+ A VV+ +P NP+ + QA R R GQK ++ R +
Sbjct: 594 P-SKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLL 652
Query: 1583 VKDTVEDSIY 1592
++E+ +Y
Sbjct: 653 SAGSLEELVY 662
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 97/240 (40%), Gaps = 46/240 (19%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGV-RDTSFSNTSLMDISDLASADIVI 549
G LI+CP+ I+ W E R K +Y G RD +++ ++++
Sbjct: 199 GPVLIICPSSIIHNWESEFSRWA--SFFKVSVYHGSNRDM------ILEKLKARGVEVLV 250
Query: 550 TTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAA 609
T++D F+ + PV L+ I W V DEA +++ +
Sbjct: 251 TSFDT--------------------FRIQGPV----LSGINWEIVIADEAHRLKNEKSKL 286
Query: 610 TEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKG---- 665
E L + +K +TGT +Q K+ +L+ L ++ T + + +P + G
Sbjct: 287 YEACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRAT 346
Query: 666 ------DIGAMEFTH--TIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFYQR 717
I H ++ ++ M R +K+ L + +E+ + + +S ++ YQR
Sbjct: 347 APERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHL-MMGKEDNVVFCQMSQLQRRVYQR 405
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 1465 KEKVLVFSSWNDVLD-VLEHAFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGCEKSTP 1523
KEKVLVFS + D L +++H ++ + G + + KQ T E + P
Sbjct: 1215 KEKVLVFSQYIDPLKLIMKHL-----VSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDP 1269
Query: 1524 KS-IQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFI 1582
KS +V L + + G++L+ A V+L++ + NPA E QAISR +RIGQK + +
Sbjct: 1270 KSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLV 1329
Query: 1583 VKDTVEDSIY 1592
K T E Y
Sbjct: 1330 AKGTPEGPKY 1339
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 1463 DHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQ---VAINQFRGKQNGTKGCE 1519
D +VL+FS LD+L+ ++ R+ G +A+ AI F K E
Sbjct: 391 DSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSE 450
Query: 1520 KSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIH 1579
+ V ++ + G GLNL+ A V+ E NP + QA+ R HRIGQ + L
Sbjct: 451 VDGSNAF-VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSI 509
Query: 1580 RFIVKDTVEDSIYK 1593
+ + +VE+ I +
Sbjct: 510 NLVTEHSVEEVILR 523
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 115/308 (37%), Gaps = 74/308 (24%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEG-------VRDTSFSNTSLMDISDLA 543
G L++CP + W EI R T +L+ Y G +R + + +
Sbjct: 102 GPFLVLCPLSVTDGWVSEINRFT--PNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFL 159
Query: 544 SADIVITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVE 603
D+++TTYD+ D L++I W +DEAQ ++
Sbjct: 160 PFDVLLTTYDIALVD------------------------QDFLSQIPWQYAIIDEAQRLK 195
Query: 604 S-NATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPY 662
+ N+ + + ITGTPIQ L +L+ L+ F F T + +
Sbjct: 196 NPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFK--- 252
Query: 663 EKGD-IGAMEFTHT---------IFKQIMWRSSKKHVAD--ELDLPSQEECLSWLTLSPV 710
E GD + ++ ++ I M R +K + + L LP E + L +
Sbjct: 253 ETGDGLSGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSL 312
Query: 711 EEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLK 770
++ Y IL +++PG L+ HT L N +++
Sbjct: 313 QKKIY-------------------TSILRKELPGLLELSSGGS---NHT---SLQNIVIQ 347
Query: 771 LRQACCHP 778
LR+AC HP
Sbjct: 348 LRKACSHP 355
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVAINQFRGKQNGTKGCEKSTP 1523
+VL+FS +LD+LE + R+ G G + +I + G EK
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAY-----NKPGSEKF-- 560
Query: 1524 KSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1583
V LL + G G+NL A V+L + NP + QA R HRIGQK + + RF
Sbjct: 561 ----VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCT 616
Query: 1584 KDTVEDSI 1591
+ +E+ +
Sbjct: 617 ESAIEEKV 624
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 31/195 (15%)
Query: 584 TLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFL 643
T L R W + +DEA +++ + ++ + + ITGTP+Q L +L+ LL FL
Sbjct: 304 TALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 363
Query: 644 KVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLS 703
F++ + E + E ++ H + + + R K V E LP ++E +
Sbjct: 364 LPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDV--EKGLPPKKETIL 421
Query: 704 WLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGK 763
+ +S +++ +Y+ L+ D+ E++N E +
Sbjct: 422 KVGMSQMQKQYYK--------------ALLQKDL--------EAVNAGG-------ERKR 452
Query: 764 LLNALLKLRQACCHP 778
LLN ++LR+ C HP
Sbjct: 453 LLNIAMQLRKCCNHP 467
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVAINQFRGKQNGTKGCEKSTP 1523
+VL+FS +LD+LE + R+ G G + +I + G EK
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAY-----NKPGSEKF-- 560
Query: 1524 KSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1583
V LL + G G+NL A V+L + NP + QA R HRIGQK + + RF
Sbjct: 561 ----VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCT 616
Query: 1584 KDTVEDSI 1591
+ +E+ +
Sbjct: 617 ESAIEEKV 624
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 31/195 (15%)
Query: 584 TLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFL 643
T L R W + +DEA +++ + ++ + + ITGTP+Q L +L+ LL FL
Sbjct: 304 TALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 363
Query: 644 KVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLS 703
F++ + E + E ++ H + + + R K V E LP ++E +
Sbjct: 364 LPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDV--EKGLPPKKETIL 421
Query: 704 WLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGK 763
+ +S +++ +Y+ L+ D+ E++N E +
Sbjct: 422 KVGMSQMQKQYYK--------------ALLQKDL--------EAVNAGG-------ERKR 452
Query: 764 LLNALLKLRQACCHP 778
LLN ++LR+ C HP
Sbjct: 453 LLNIAMQLRKCCNHP 467
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVAINQFRGKQNGTKGCEKSTP 1523
+VL+FS +LD+LE + R+ G G + +I + G EK
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAY-----NKPGSEKF-- 560
Query: 1524 KSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1583
V LL + G G+NL A V+L + NP + QA R HRIGQK + + RF
Sbjct: 561 ----VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCT 616
Query: 1584 KDTVEDSI 1591
+ +E+ +
Sbjct: 617 ESAIEEKV 624
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 31/195 (15%)
Query: 584 TLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFL 643
T L R W + +DEA +++ + ++ + + ITGTP+Q L +L+ LL FL
Sbjct: 304 TALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 363
Query: 644 KVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLS 703
F++ + E + E ++ H + + + R K V E LP ++E +
Sbjct: 364 LPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDV--EKGLPPKKETIL 421
Query: 704 WLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGK 763
+ +S +++ +Y+ L+ D+ E++N E +
Sbjct: 422 KVGMSQMQKQYYK--------------ALLQKDL--------EAVNAGG-------ERKR 452
Query: 764 LLNALLKLRQACCHP 778
LLN ++LR+ C HP
Sbjct: 453 LLNIAMQLRKCCNHP 467
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVAINQFRGKQNGTKGCEKSTP 1523
+VL+FS +LD+LE + R+ G G + +I + G EK
Sbjct: 513 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAY-----NKPGSEKF-- 565
Query: 1524 KSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1583
V LL + G G+NL A V+L + NP + QA R HRIGQK + + RF
Sbjct: 566 ----VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCT 621
Query: 1584 KDTVEDSI 1591
++ +E +
Sbjct: 622 ENAIEAKV 629
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 584 TLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFL 643
T L R W + +DEA +++ + ++ + + ITGTP+Q L +L+ LL FL
Sbjct: 309 TTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 368
Query: 644 KVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLS 703
F++ + E + E ++ H + + + R K V E LP ++E +
Sbjct: 369 LPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDV--EKGLPPKKETIL 426
Query: 704 WLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGK 763
+ +S +++ +Y+ L+ D+ E +N E +
Sbjct: 427 KVGMSQMQKQYYK--------------ALLQKDL--------EVVNGGG-------ERKR 457
Query: 764 LLNALLKLRQACCHP 778
LLN ++LR+ C HP
Sbjct: 458 LLNIAMQLRKCCNHP 472
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKG---GRKAQVAINQFRGKQNGTKGCEKSTP 1523
+VL+FS +LD+LE + R+ G G + +I + G EK
Sbjct: 513 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAY-----NKPGSEKF-- 565
Query: 1524 KSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1583
V LL + G G+NL A V+L + NP + QA R HRIGQK + + RF
Sbjct: 566 ----VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCT 621
Query: 1584 KDTVEDSI 1591
++ +E +
Sbjct: 622 ENAIEAKV 629
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 31/195 (15%)
Query: 584 TLLTRIYWWRVCLDEAQMVESNATAATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFL 643
T L R W + +DEA +++ + ++ + + ITGTP+Q L +L+ LL FL
Sbjct: 309 TTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 368
Query: 644 KVSPFNTYRWWAEVLRDPYEKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLS 703
F++ + E + E ++ H + + + R K V E LP ++E +
Sbjct: 369 LPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDV--EKGLPPKKETIL 426
Query: 704 WLTLSPVEEHFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGK 763
+ +S +++ +Y+ L+ D+ E +N E +
Sbjct: 427 KVGMSQMQKQYYK--------------ALLQKDL--------EVVNGGG-------ERKR 457
Query: 764 LLNALLKLRQACCHP 778
LLN ++LR+ C HP
Sbjct: 458 LLNIAMQLRKCCNHP 472
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQ 1507
K E + R + +K H+ +L+FS ++D+LE + N+ ++R+ G K
Sbjct: 696 KFELLDRLLPKLKKAGHR--ILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTD----- 748
Query: 1508 FRGKQNGTKGCEKSTPKSIQVLLLL-IQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISR 1566
Q G + + P S + LL + G GLNL A +++ + NP + QA R
Sbjct: 749 ----QRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDR 804
Query: 1567 VHRIGQKNKTLIHRFIVKDTVEDSI 1591
HRIGQK + + + ++E+ I
Sbjct: 805 AHRIGQKKEVRVFVLVSIGSIEEVI 829
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 113/306 (36%), Gaps = 73/306 (23%)
Query: 485 ESPIASGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLAS 544
ES G LI+ P +LP W +E S+ +Y+G ++ T +
Sbjct: 430 ESKDLHGPHLILAPKAVLPNWENEFALWA--PSISAFLYDGSKE---KRTEIRARIAGGK 484
Query: 545 ADIVITTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVES 604
+++IT YD++ D L +I W + +DE +++
Sbjct: 485 FNVLITHYDLIMRD------------------------KAFLKKIDWNYMIVDEGHRLKN 520
Query: 605 NATA-ATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYE 663
+ A A + K +TGTPIQ L +L+ LL FL FN+ + E P+
Sbjct: 521 HECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPF- 579
Query: 664 KGDIGAMEFT-----------HTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEE 712
+ G+ T H + + + R K V E LP + + + +S ++
Sbjct: 580 -AECGSASLTDEEELLIINRLHHVIRPFLLRRKKSEV--EKFLPGKTQVILKCDMSAWQK 636
Query: 713 HFYQRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLR 772
+Y++ V D V G S N S L N ++LR
Sbjct: 637 LYYKQ-----VTDVGRV--------------GLHSGNGKSK---------SLQNLTMQLR 668
Query: 773 QACCHP 778
+ C HP
Sbjct: 669 KCCNHP 674
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 114/296 (38%), Gaps = 59/296 (19%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFS-NTSLMDISDLASADIVI 549
G L++CP + W EI R T +L+ Y G + S+ D D+++
Sbjct: 102 GPFLVLCPLSVTDGWVSEINRFT--PNLEVLRYVGDKYCRLDMRKSMYDHGHFLPFDVLL 159
Query: 550 TTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVES-NATA 608
TTYD+ D L++I W +DEAQ +++ N+
Sbjct: 160 TTYDIALVD------------------------QDFLSQIPWQYAIIDEAQRLKNPNSVL 195
Query: 609 ATEMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEKGDIG 668
+ + ITGTPIQ L +L+ L+ F F T + ++ + D+
Sbjct: 196 YNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLDVS 255
Query: 669 AMEFTHTIFKQI----MWRSSKKHVAD--ELDLPSQEECLSWLTLSPVEEHFYQRQHETC 722
+ T+ K I M R +K + + L LP E + L +++ Y
Sbjct: 256 NDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIY------- 308
Query: 723 VRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQACCHP 778
IL +++PG L+ HT L N +++LR+AC HP
Sbjct: 309 ------------TSILRKELPGLLELSSGGS---NHT---SLQNIVIQLRKACSHP 346
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 1463 DHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQ---VAINQFRGKQNGTKGCE 1519
D +VL+FS LD+L+ ++ R+ G +A+ AI F +G+
Sbjct: 382 DSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNF--SVDGSNAF- 438
Query: 1520 KSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIH 1579
V ++ + G GLNL+ A V+ E NP + QA+ R HRIGQ + L
Sbjct: 439 --------VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSI 490
Query: 1580 RFIVKDTVEDSIYK 1593
+ + +VE+ I +
Sbjct: 491 NLVTEHSVEEVILR 504
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 1466 EKVLVFSSWNDVLDVLEHAFAANNITFVRMKGGRKAQVAINQFRGKQNGTKGCEKSTPKS 1525
+KVL+FS + + + V+E I F +M ++ + QN C
Sbjct: 1194 DKVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDAD-C------- 1245
Query: 1526 IQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVKD 1585
+ LL+ GA GL+L HV L+EP+ + + E Q ISR HR+G K + ++
Sbjct: 1246 --MALLMDGSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRG 1303
Query: 1586 TVEDSIYK-LNRSRSNHSFISGN 1607
T+E+ + + L + + +SG+
Sbjct: 1304 TIEEQMMRFLEDAEKSDRLLSGD 1326
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 130/305 (42%), Gaps = 73/305 (23%)
Query: 490 SGATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIVI 549
S ATLIV P ++ W +I +H L+ ++ + L S D+VI
Sbjct: 753 SKATLIVVPTNLVNHWLTQIQKHVCSDQLRILVWA-------DHIELSPHSLAWDYDVVI 805
Query: 550 TTYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNA--T 607
TT+ L + + +K+ P+I +++W RV LDE + S+ T
Sbjct: 806 TTFSRLSAEWNP--------------RKKSPLI-----QVHWLRVMLDEGHTLGSSVSLT 846
Query: 608 AATEMALRLHSKHHWCITGTPI----QRKLDDLYGLLRFL--KVSPFNTYRWWAEVLRDP 661
+MA+ L + + W +TGTP +L + LL+FL +V N W A +LR P
Sbjct: 847 NKFQMAVSLTACNRWLLTGTPTPNTPNSQLSHIQPLLKFLHEEVYGENPKFWEAGILR-P 905
Query: 662 YEKGDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLT-LSPVEEHFYQRQHE 720
+E + ++ M S KK DL C+ +T L+ + H
Sbjct: 906 FEAEMEEGRLRLLQLLQRCMISSRKK------DLQMIPPCIKKVTYLNFLPGH------- 952
Query: 721 TCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNA---------LLKL 771
R +E++E++R +IL L D +DP +H E+ LLN+ + +
Sbjct: 953 --ARSYNELVETVRRNIL---------LADWNDP--SHVES--LLNSKQWKFRSITISNV 997
Query: 772 RQACC 776
R +CC
Sbjct: 998 RLSCC 1002
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 26/153 (16%)
Query: 1456 ILSIKATDHKEKVLVFSSWNDVLDVLE------------HAFAANNITFVRMKGGRKA-- 1501
ILS+ A D +K LVFS LD++E F + R+ G ++
Sbjct: 1123 ILSMSA-DVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSE 1181
Query: 1502 -QVAINQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAE 1560
Q +++F N K ++ L+ + G+ G+NL A V++V+ NP +
Sbjct: 1182 RQKLVDRFNEPDN----------KRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1231
Query: 1561 AQAISRVHRIGQKNKTLIHRFIVKDTVEDSIYK 1593
QAI R R GQK +R + + T+E+ IYK
Sbjct: 1232 LQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYK 1264
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 26/153 (16%)
Query: 1456 ILSIKATDHKEKVLVFSSWNDVLDVLE------------HAFAANNITFVRMKGGRKA-- 1501
ILS+ A D +K LVFS LD++E F + R+ G ++
Sbjct: 1123 ILSMSA-DVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSE 1181
Query: 1502 -QVAINQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAE 1560
Q +++F N K ++ L+ + G+ G+NL A V++V+ NP +
Sbjct: 1182 RQKLVDRFNEPDN----------KRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1231
Query: 1561 AQAISRVHRIGQKNKTLIHRFIVKDTVEDSIYK 1593
QAI R R GQK +R + + T+E+ IYK
Sbjct: 1232 LQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYK 1264
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 26/153 (16%)
Query: 1456 ILSIKATDHKEKVLVFSSWNDVLDVLE------------HAFAANNITFVRMKGGRKA-- 1501
ILS+ A D +K LVFS LD++E F + R+ G ++
Sbjct: 1123 ILSMSA-DVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSE 1181
Query: 1502 -QVAINQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAE 1560
Q +++F N K ++ L+ + G+ G+NL A V++V+ NP +
Sbjct: 1182 RQKLVDRFNEPDN----------KRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1231
Query: 1561 AQAISRVHRIGQKNKTLIHRFIVKDTVEDSIYK 1593
QAI R R GQK +R + + T+E+ IYK
Sbjct: 1232 LQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYK 1264
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 1456 ILSIKATDHKEKVLVFSSWNDVLDVLE--------HA----FAANNITFVRMKGGRKA-- 1501
ILS+ A D +K LVFS LD++E H F + R+ G ++
Sbjct: 1102 ILSMSA-DVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSE 1160
Query: 1502 -QVAINQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAE 1560
Q +++F N K ++ L+ + G+ G+NL A V++V+ NP +
Sbjct: 1161 RQKLVDRFNEPDN----------KRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1210
Query: 1561 AQAISRVHRIGQKNKTLIHRFIVKDTVEDSIYK 1593
QAI R R GQK +R + + T+E+ IYK
Sbjct: 1211 LQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYK 1243
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 16/134 (11%)
Query: 1467 KVLVFSSWNDVLDVLEHAFAANNITFVRMKGG---RKAQVAINQFRGKQNGTKGCEKSTP 1523
K++VF+ + VLD ++ I FVR+ G R Q+A+ F+
Sbjct: 556 KMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSS----------- 604
Query: 1524 KSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIV 1583
+++ ++ ++ G GL+ AQ+VV +E P+ QA R HR GQ + ++ F
Sbjct: 605 -EVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCA 663
Query: 1584 KDTVEDSIYK-LNR 1596
KDT+++S ++ LN+
Sbjct: 664 KDTMDESNWQNLNK 677
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGG---RKAQVA 1504
K+ + R ++ ++ T H+ VL+FS+ +LD+LE + + R+ G + A
Sbjct: 1308 KLWILDRILIKLQRTGHR--VLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESA 1365
Query: 1505 INQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAI 1564
I F + C + LL I+ GLNL A VV+ +P NP E QA+
Sbjct: 1366 IVDF---NDPDTDCF--------IFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAV 1414
Query: 1565 SRVHRIGQ 1572
+R HRIGQ
Sbjct: 1415 ARAHRIGQ 1422
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 113/303 (37%), Gaps = 61/303 (20%)
Query: 491 GATLIVCPAPILPQWHDEIIRHTRPGSLKTCIYEGVRDTSFSNTSLMDISDLASADIVIT 550
G LI+ P +L W E+ HT S+ Y G +D + L ++++T
Sbjct: 1031 GPHLIIVPNAVLVNWKSEL--HTWLPSVSCIYYVGTKD---QRSKLFSQVKFEKFNVLVT 1085
Query: 551 TYDVLKEDLSHDSDRHEGDRHLLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNATAAT 610
TY+ + D S L+++ W + +DEAQ ++ +
Sbjct: 1086 TYEFIMYDRSK------------------------LSKVDWKYIIIDEAQRMKDRESVLA 1121
Query: 611 EMALRLHSKHHWCITGTPIQRKLDDLYGLLRFLKVSPFNTYRWWAEVLRDPYEK------ 664
R + +TGTP+Q L +L+ LL L F+ + + + P++K
Sbjct: 1122 RDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHN 1181
Query: 665 ---------GDIGAMEFTHTIFKQIMWRSSKKHVADELDLPSQEECLSWLTLSPVEEHFY 715
+ + H I + M R + V E LP++ + +S ++ Y
Sbjct: 1182 IEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDV--EGSLPAKVSVVLRCRMSAIQSAVY 1239
Query: 716 QRQHETCVRDAHEVIESLRNDILNRKVPGSESLNDSSDPLITHTEAGKLLNALLKLRQAC 775
D + +LR D P E L +P+ L N ++LR+AC
Sbjct: 1240 ---------DWIKATGTLRVD------PDDEKLRAQKNPIYQAKIYRTLNNRCMELRKAC 1284
Query: 776 CHP 778
HP
Sbjct: 1285 NHP 1287
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 1448 KIEAVTRRILSIKATDHKEKVLVFSSWNDVLDVLEHAFAANNITFVRMKGG---RKAQVA 1504
K+ + R ++ ++ T H+ VL+FS+ +LD+LE + + R+ G + A
Sbjct: 1309 KLWILDRILIKLQRTGHR--VLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESA 1366
Query: 1505 INQFRGKQNGTKGCEKSTPKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAI 1564
I F + C + LL I+ GLNL A VV+ +P NP E QA+
Sbjct: 1367 IVDF---NDPDTDCF--------IFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAV 1415
Query: 1565 SRVHRIGQ 1572
+R HRIGQ
Sbjct: 1416 ARAHRIGQ 1423