Miyakogusa Predicted Gene

Lj2g3v2171700.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2171700.3 tr|G7KD73|G7KD73_MEDTR UPF0176 protein
MTR_5g067730 OS=Medicago truncatula GN=MTR_5g067730 PE=3
SV=1,74.95,0,Rhodanese/Cell cycle control phosphatase,Rhodanese-like
domain; seg,NULL; Rhodanese,Rhodanese-like d,CUFF.38644.3
         (448 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40760.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...   560   e-160
AT1G09280.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Rhodanese-...   111   1e-24
AT1G17850.2 | Symbols:  | Rhodanese/Cell cycle control phosphata...    96   3e-20
AT1G17850.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...    96   5e-20

>AT2G40760.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr2:17010050-17011968 FORWARD
           LENGTH=474
          Length = 474

 Score =  560 bits (1442), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/370 (74%), Positives = 307/370 (82%), Gaps = 8/370 (2%)

Query: 76  SLVVVSFYKFADFPDHALMRNPLKQLCEKLRVSGGIILAPEGINGSICGTREAVEEVLAF 135
           SLVVVSFYKFADFP+HA  R PLK LCEKLRVSGGIILAPEGINGSICG RE+VEEVLAF
Sbjct: 103 SLVVVSFYKFADFPEHADFRKPLKDLCEKLRVSGGIILAPEGINGSICGIRESVEEVLAF 162

Query: 136 VQSDDRLKGLRRLESPVSPEEEAIHSGQHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVT 195
           +Q D RL GLR++E+PVSPE+EAIH   HGHS+SSPLAAGEDAPFRWDHVRVKLKKEIVT
Sbjct: 163 IQRDVRLNGLRQVETPVSPEQEAIH---HGHSSSSPLAAGEDAPFRWDHVRVKLKKEIVT 219

Query: 196 LGMPAVSPIEKVGKYVSPKEWNDLISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREF 255
           LG+P+VSPIE+VG YVSP+EWN+LISDP+TVVIDVRN YETRIGKFKGAVDPCTT+FR F
Sbjct: 220 LGIPSVSPIERVGTYVSPEEWNELISDPETVVIDVRNTYETRIGKFKGAVDPCTTAFRNF 279

Query: 256 PSWVEERFQINRTDAE-HPKVNVNNAAEDAEKE--MENPKQHLPRIAMYCTGGIRCEKAS 312
           PSWVE +F + +   E   KV   + +E   KE   E PK  LPRIAMYCTGGIRCEKAS
Sbjct: 280 PSWVENQFALKQEGNETQAKVEKEDFSEITHKEDKAEKPKT-LPRIAMYCTGGIRCEKAS 338

Query: 313 SLLLSNGFKEVYHLEGGILKYLEEVPETQSLWEGECFVFDKRVSVEHGLVQGNFKLCYGC 372
           SLLLS GF+EVYHL+GGILKYLEEVP+T+SLWEGECFVFDKRVSVEHGL QG  KLCYGC
Sbjct: 339 SLLLSQGFEEVYHLKGGILKYLEEVPKTESLWEGECFVFDKRVSVEHGLAQGTHKLCYGC 398

Query: 373 KQPVSDVDMEAPEYEYGVSCPYCFALKSDXXXXXXXXXXXXXXXWGIIGGPDKGRRPAAR 432
           KQP+SD DMEAPEYEYGVSCPYC++ KS+               WG+IGGPDKGRRPA +
Sbjct: 399 KQPISDEDMEAPEYEYGVSCPYCYSKKSEEEKERARARQTQFEEWGVIGGPDKGRRPATK 458

Query: 433 ESDSASRKPN 442
             DS  +K N
Sbjct: 459 -PDSPRKKIN 467


>AT1G09280.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
           Rhodanese-like (InterPro:IPR001763), Serine hydrolase
           (InterPro:IPR005645); BEST Arabidopsis thaliana protein
           match is: Rhodanese/Cell cycle control phosphatase
           superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast
           hits to 5912 proteins in 1592 species: Archae - 0;
           Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants -
           229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI
           BLink). | chr1:2998209-3001253 REVERSE LENGTH=581
          Length = 581

 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 145/296 (48%), Gaps = 62/296 (20%)

Query: 79  VVSFYKFADFPDHALMRNPLKQLCEKLRVSGGIILAPEGINGSICGTREAVEEVLAFVQS 138
           V+ +YK+   PD   + +  +  C  L + G + L+P+G+N ++ G   A+EE +A  +S
Sbjct: 22  VLLYYKYTSVPDLDELVSFYESSCNSLGLLGRVRLSPKGVNVTVGGKLTALEEHIAAAKS 81

Query: 139 DDRLKGLR-RLESPVSPEEEAIHSGQHGHSASSPLAAGEDAPFRWDHVRVKLKKEIVTLG 197
           +   +G   +L S   P  + +                E+  F    +RV   +E+VT  
Sbjct: 82  NCLFEGTDFKLASCHHPLNDKV---------------AEECGFTSLSIRVV--EELVTFS 124

Query: 198 -MPAVSP--IEKVGKYVSPKEWNDLIS-------DPDTVVIDVRNNYETRIGKFKG---- 243
             P + P  I   GK++S  E++ ++        + + V++D RN YETRIGKF+     
Sbjct: 125 PCPPLKPPEISNAGKHLSAAEFHSVLQSANGKSENKELVLLDARNLYETRIGKFESENVE 184

Query: 244 AVDPCTTSFREFPSWVEERFQINRTDAEHPKVNVNNAAEDAEKEMENPKQHLPRIAMYCT 303
            +DP    + + P+W+++                     +AEK M+        + MYCT
Sbjct: 185 TLDPEIRQYSDLPTWIDQ---------------------NAEK-MKGKN-----VLMYCT 217

Query: 304 GGIRCEKASSLLLSN--GFKEVYHLEGGILKYLEEVPETQSLWEGECFVFDKRVSV 357
           GGIRCE AS+ + S   GF+  + L GGI +YLE+ P +   ++G+ FVFD R+SV
Sbjct: 218 GGIRCEMASAYIRSKGAGFENTFQLYGGIQRYLEQFP-SGGFFKGKNFVFDHRISV 272


>AT1G17850.2 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr1:6146470-6148820 REVERSE
           LENGTH=448
          Length = 448

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 123/299 (41%), Gaps = 53/299 (17%)

Query: 72  ESAHSLVVVSFYKFADFPDHALMRNPLKQLCEKLRVSGGIILAPEGINGSICGTREAVEE 131
           +     +VV+FY+F    D            + L + G I L  +GIN    G  +    
Sbjct: 78  DEGEDFIVVNFYRFVSIGDPEAEIEKHLSFLKDLNIRGRIYLNEQGINAQYSGPSKDALA 137

Query: 132 VLAFVQSDDRLKGLRRLESPVSPEEEAIHSGQHGHSASSPLAAGEDAPFRWDHVRVKLKK 191
            + +++ DDR   L    SP           +H      P    ++ P         ++ 
Sbjct: 138 YVEWLKGDDRFSDLLVQMSPAM--------NRHAF----PKLKLQNKP-------SLVQY 178

Query: 192 EIVTLGMPAVSPIEKVGKYVSPKEWN----DLISDPDT---------VVIDVRNNYETRI 238
           E     +P + P  +  K + P EW     DL  D +          +++DVRN YE  +
Sbjct: 179 EGGISHLPLLDPPMR-AKPLEPSEWKRKLKDLTDDDEASPSNSGKSYILLDVRNGYEWDV 237

Query: 239 GKFKGAVDPCTTSFREFPSWVEERFQINRTDAEHPKVNVNNAAEDAEKEMENPKQHLPRI 298
           G F+GA  P    FR     + +     +     P +NV+    D              I
Sbjct: 238 GHFRGAHRPEVDCFRNTSFGLSDE----KEAPSDPLINVDKEKTD--------------I 279

Query: 299 AMYCTGGIRCEKASSLLLSNGFKEVYHLEGGILKYLEEVPETQSLWEGECFVFDKRVSV 357
            MYCTGGIRC+  S++L   GFK +Y L+GG+  YL+E  E  + W G  FVFD R+S+
Sbjct: 280 LMYCTGGIRCDVYSTVLRQRGFKNLYTLKGGVSHYLKE--EGTAEWVGNLFVFDSRLSL 336


>AT1G17850.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr1:6146470-6148820 REVERSE
           LENGTH=446
          Length = 446

 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 124/302 (41%), Gaps = 61/302 (20%)

Query: 72  ESAHSLVVVSFYKFADFPDHALMRNPLKQLCEKLRVSGGIILAPEGINGSICGTREAVEE 131
           +     +VV+FY+F    D            + L + G I L  +GIN    G  +    
Sbjct: 78  DEGEDFIVVNFYRFVSIGDPEAEIEKHLSFLKDLNIRGRIYLNEQGINAQYSGPSKDALA 137

Query: 132 VLAFVQSDDRLKGLRRLESPVSPEEEAIHSGQHGHSASSPLAAGEDAPFRWDHVRVKLKK 191
            + +++ DDR   L    SP           +H                 +  ++++ K 
Sbjct: 138 YVEWLKGDDRFSDLLVQMSPAM--------NRHA----------------FPKLKLQNKP 173

Query: 192 EIVTLG---MPAVSPIEKVGKYVSPKEWN----DLISDPDT---------VVIDVRNNYE 235
            +   G   +P + P  +  K + P EW     DL  D +          +++DVRN YE
Sbjct: 174 SLYEGGISHLPLLDPPMR-AKPLEPSEWKRKLKDLTDDDEASPSNSGKSYILLDVRNGYE 232

Query: 236 TRIGKFKGAVDPCTTSFREFPSWVEERFQINRTDAEHPKVNVNNAAEDAEKEMENPKQHL 295
             +G F+GA  P    FR     + +     +     P +NV+    D            
Sbjct: 233 WDVGHFRGAHRPEVDCFRNTSFGLSDE----KEAPSDPLINVDKEKTD------------ 276

Query: 296 PRIAMYCTGGIRCEKASSLLLSNGFKEVYHLEGGILKYLEEVPETQSLWEGECFVFDKRV 355
             I MYCTGGIRC+  S++L   GFK +Y L+GG+  YL+E  E  + W G  FVFD R+
Sbjct: 277 --ILMYCTGGIRCDVYSTVLRQRGFKNLYTLKGGVSHYLKE--EGTAEWVGNLFVFDSRL 332

Query: 356 SV 357
           S+
Sbjct: 333 SL 334