Miyakogusa Predicted Gene

Lj2g3v2125400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2125400.1 Non Chatacterized Hit- tr|I1LG07|I1LG07_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33017
PE,96.88,0,ZF_RING_2,Zinc finger, RING-type; zf-RING_2,Zinc finger,
RING-type; SYNOVIOLIN-RELATED,NULL; no
desc,NODE_29638_length_448_cov_414.218750.path4.1
         (160 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16090.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   321   2e-88
AT1G65040.2 | Symbols:  | RING/U-box superfamily protein | chr1:...   311   1e-85
AT1G65040.3 | Symbols:  | RING/U-box superfamily protein | chr1:...   310   2e-85
AT1G65040.1 | Symbols:  | RING/U-box superfamily protein | chr1:...   309   5e-85
AT4G25230.2 | Symbols: RIN2 | RPM1 interacting protein 2 | chr4:...    92   2e-19
AT4G25230.1 | Symbols: RIN2 | RPM1 interacting protein 2 | chr4:...    92   2e-19
AT5G51450.1 | Symbols: RIN3 | RPM1 interacting protein 3 | chr5:...    78   2e-15
AT5G51450.2 | Symbols: RIN3 | RPM1 interacting protein 3 | chr5:...    78   3e-15
AT5G01960.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    66   1e-11
AT2G44581.1 | Symbols:  | RING/U-box superfamily protein | chr2:...    59   2e-09
AT2G44578.1 | Symbols:  | RING/U-box superfamily protein | chr2:...    55   2e-08
AT5G42940.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    52   2e-07
AT1G17970.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    52   2e-07
AT1G73760.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    52   2e-07
AT4G31450.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    51   3e-07
AT5G02750.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    51   3e-07
AT3G02340.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    50   6e-07
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364...    50   8e-07
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364...    50   8e-07
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364...    50   8e-07
AT5G15820.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    49   1e-06
AT3G20395.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    49   1e-06
AT1G04790.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    49   1e-06
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c...    49   1e-06
AT3G56580.3 | Symbols:  | RING/U-box superfamily protein | chr3:...    49   2e-06
AT3G56580.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    49   2e-06
AT3G56580.2 | Symbols:  | RING/U-box superfamily protein | chr3:...    49   2e-06
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c...    49   2e-06
AT3G30460.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    48   2e-06
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c...    48   2e-06
AT5G66070.2 | Symbols:  | RING/U-box superfamily protein | chr5:...    48   3e-06
AT4G12140.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    48   3e-06
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:...    47   4e-06
AT4G17245.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    47   5e-06
AT4G24015.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    47   6e-06
AT4G05350.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    47   6e-06
AT3G48030.1 | Symbols:  | hypoxia-responsive family protein / zi...    47   7e-06
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ...    47   7e-06
AT5G08139.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    46   8e-06
AT2G47560.1 | Symbols:  | RING/U-box superfamily protein | chr2:...    46   8e-06
AT4G40070.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    46   9e-06
AT2G42350.1 | Symbols:  | RING/U-box superfamily protein | chr2:...    46   9e-06
AT1G49220.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    46   1e-05
AT1G26800.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    46   1e-05

>AT3G16090.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:5456513-5458694 FORWARD LENGTH=492
          Length = 492

 Score =  321 bits (822), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 141/160 (88%), Positives = 156/160 (97%)

Query: 1   MILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNY 60
           MILATTTV+IFVKY+FYV+DMLM+GQWEKKPV+TFYLELIRDLLHLSMY+CFFF+IF+NY
Sbjct: 180 MILATTTVAIFVKYVFYVTDMLMDGQWEKKPVYTFYLELIRDLLHLSMYICFFFVIFMNY 239

Query: 61  GIPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEM 120
           G+PLHL+RELYETFRNF++R++DY+RYRKITSNMNDRFPDATPEEL ASDATCIICREEM
Sbjct: 240 GVPLHLLRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDATCIICREEM 299

Query: 121 TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 160
           T AKKLICGHLFHVHCLRSWLERQ TCPTCRALVVPPEN 
Sbjct: 300 TNAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENA 339


>AT1G65040.2 | Symbols:  | RING/U-box superfamily protein |
           chr1:24160105-24163365 REVERSE LENGTH=460
          Length = 460

 Score =  311 bits (798), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 137/160 (85%), Positives = 152/160 (95%)

Query: 1   MILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNY 60
           MILATTTVSI VKY FYV+DML EGQWE KPV+TFYLEL+RDLLHLSMYLCFF +IF+NY
Sbjct: 180 MILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNY 239

Query: 61  GIPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEM 120
           G+PLHLIRELYETFRNFK+R+ DY+RYRKITSNMNDRFPDATPEEL+++DATCIICREEM
Sbjct: 240 GLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEM 299

Query: 121 TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 160
           T+AKKL+CGHLFHVHCLRSWLERQ+TCPTCRALVVP EN 
Sbjct: 300 TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENA 339


>AT1G65040.3 | Symbols:  | RING/U-box superfamily protein |
           chr1:24160105-24163365 REVERSE LENGTH=389
          Length = 389

 Score =  310 bits (795), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 137/160 (85%), Positives = 152/160 (95%)

Query: 1   MILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNY 60
           MILATTTVSI VKY FYV+DML EGQWE KPV+TFYLEL+RDLLHLSMYLCFF +IF+NY
Sbjct: 109 MILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNY 168

Query: 61  GIPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEM 120
           G+PLHLIRELYETFRNFK+R+ DY+RYRKITSNMNDRFPDATPEEL+++DATCIICREEM
Sbjct: 169 GLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEM 228

Query: 121 TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 160
           T+AKKL+CGHLFHVHCLRSWLERQ+TCPTCRALVVP EN 
Sbjct: 229 TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENA 268


>AT1G65040.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:24160105-24161992 REVERSE LENGTH=281
          Length = 281

 Score =  309 bits (792), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 137/160 (85%), Positives = 152/160 (95%)

Query: 1   MILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNY 60
           MILATTTVSI VKY FYV+DML EGQWE KPV+TFYLEL+RDLLHLSMYLCFF +IF+NY
Sbjct: 1   MILATTTVSIIVKYAFYVTDMLKEGQWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNY 60

Query: 61  GIPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEM 120
           G+PLHLIRELYETFRNFK+R+ DY+RYRKITSNMNDRFPDATPEEL+++DATCIICREEM
Sbjct: 61  GLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEM 120

Query: 121 TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 160
           T+AKKL+CGHLFHVHCLRSWLERQ+TCPTCRALVVP EN 
Sbjct: 121 TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENA 160


>AT4G25230.2 | Symbols: RIN2 | RPM1 interacting protein 2 |
           chr4:12924446-12928671 FORWARD LENGTH=578
          Length = 578

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 17/128 (13%)

Query: 35  FYLELIRDLLHLSMYLCFFFLIFVNYGIPLHLIRELYETFRNFKV-------RIADYIRY 87
           F+L++   ++ L  YL  ++L    +GI  HL+  +   F N +        RI  YI+ 
Sbjct: 258 FFLDMATLVMALGHYLHIWWL----HGIAFHLVDAVL--FLNIRALLSAILKRIKGYIKL 311

Query: 88  RKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQ--- 144
           R     ++   PDAT EEL A D  C ICRE M  AK+L C HLFH+ CLRSWL++    
Sbjct: 312 RIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNE 371

Query: 145 -HTCPTCR 151
            ++CPTCR
Sbjct: 372 VYSCPTCR 379


>AT4G25230.1 | Symbols: RIN2 | RPM1 interacting protein 2 |
           chr4:12924446-12928671 FORWARD LENGTH=578
          Length = 578

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 17/128 (13%)

Query: 35  FYLELIRDLLHLSMYLCFFFLIFVNYGIPLHLIRELYETFRNFKV-------RIADYIRY 87
           F+L++   ++ L  YL  ++L    +GI  HL+  +   F N +        RI  YI+ 
Sbjct: 258 FFLDMATLVMALGHYLHIWWL----HGIAFHLVDAVL--FLNIRALLSAILKRIKGYIKL 311

Query: 88  RKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQ--- 144
           R     ++   PDAT EEL A D  C ICRE M  AK+L C HLFH+ CLRSWL++    
Sbjct: 312 RIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNE 371

Query: 145 -HTCPTCR 151
            ++CPTCR
Sbjct: 372 VYSCPTCR 379


>AT5G51450.1 | Symbols: RIN3 | RPM1 interacting protein 3 |
           chr5:20893164-20897223 FORWARD LENGTH=577
          Length = 577

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 17/128 (13%)

Query: 35  FYLELIRDLLHLSMYLCFFFLIFVNYGIPLHLIRELYETFRNFKV-------RIADYIRY 87
           F+L++   ++ L  YL  ++L    +G+  HL+  +   F N +        RI  YI+ 
Sbjct: 258 FFLDMATLVMALGHYLHIWWL----HGMAFHLVDAVL--FLNIRALLSSILKRIKGYIKL 311

Query: 88  RKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQ--- 144
           R     ++    DAT EEL   D  C ICRE M  AK+L C HLFH+ CLRSWL++    
Sbjct: 312 RVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNE 371

Query: 145 -HTCPTCR 151
            ++CPTCR
Sbjct: 372 VYSCPTCR 379


>AT5G51450.2 | Symbols: RIN3 | RPM1 interacting protein 3 |
           chr5:20893164-20897223 FORWARD LENGTH=595
          Length = 595

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 17/128 (13%)

Query: 35  FYLELIRDLLHLSMYLCFFFLIFVNYGIPLHLIRELYETFRNFKV-------RIADYIRY 87
           F+L++   ++ L  YL  ++L    +G+  HL+  +   F N +        RI  YI+ 
Sbjct: 258 FFLDMATLVMALGHYLHIWWL----HGMAFHLVDAVL--FLNIRALLSSILKRIKGYIKL 311

Query: 88  RKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQ--- 144
           R     ++    DAT EEL   D  C ICRE M  AK+L C HLFH+ CLRSWL++    
Sbjct: 312 RVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNE 371

Query: 145 -HTCPTCR 151
            ++CPTCR
Sbjct: 372 VYSCPTCR 379


>AT5G01960.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:370811-372775 FORWARD LENGTH=426
          Length = 426

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 6/128 (4%)

Query: 35  FYLELIRDLLHLSMYLCFFFLIFVNYG-IPLHLIRELYETFRNFKV--RIADYIRYRKIT 91
           +++ L R LL   ++  FF  +  +YG +   L+  LY TF+   V  ++  +    K  
Sbjct: 285 YFMLLYRSLLPTPVWYRFF--LNKDYGSLFSSLMTGLYLTFKLTSVVEKVQSFFTALKAL 342

Query: 92  SNMNDRFPD-ATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTC 150
           S     +   AT E++NA+   C IC+E+M T   L C H+F   C+  W ER+ TCP C
Sbjct: 343 SRKEVHYGSYATTEQVNAAGDLCAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCPLC 402

Query: 151 RALVVPPE 158
           RALV P +
Sbjct: 403 RALVKPAD 410


>AT2G44581.1 | Symbols:  | RING/U-box superfamily protein |
           chr2:18397996-18398433 REVERSE LENGTH=145
          Length = 145

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 83  DYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKL----ICGHLFHVHCLR 138
            + RYR  T +   R+   T EE ++S   C IC E  T  +K+     C H FHV C+ 
Sbjct: 41  SWRRYRTFTVHHRRRWRKTTAEEKHSS-PYCTICLENATEGEKMRRIAACSHCFHVDCID 99

Query: 139 SWLERQHTCPTCRALV--VPPEN 159
            WLE++  CP CRA +  VPP N
Sbjct: 100 PWLEKKSMCPLCRAEIPPVPPGN 122


>AT2G44578.1 | Symbols:  | RING/U-box superfamily protein |
           chr2:18400864-18401301 REVERSE LENGTH=145
          Length = 145

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 83  DYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKL----ICGHLFHVHCLR 138
            + RYR  T     R+     EE ++S   C IC E+    +K+     C H FHV C+ 
Sbjct: 41  SWRRYRTFTVQHRRRWRKTAAEEKHSSP-YCTICLEDAAEGEKMRRITACSHCFHVDCID 99

Query: 139 SWLERQHTCPTCRALV--VPPEN 159
            WL ++ TCP CRA +  VPP N
Sbjct: 100 PWLMKKSTCPLCRAEIPPVPPGN 122


>AT5G42940.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:17216649-17219171 REVERSE LENGTH=691
          Length = 691

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 13/74 (17%)

Query: 81  IADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAK---KLICGHLFHVHCL 137
           I++ ++ RK  SN      DA P         C +C+EE T  +    L CGH FH  C+
Sbjct: 615 ISNRLKQRKYKSNTKSP-QDAEP---------CCVCQEEYTEGEDMGTLECGHEFHSQCI 664

Query: 138 RSWLERQHTCPTCR 151
           + WL++++ CP C+
Sbjct: 665 KEWLKQKNLCPICK 678


>AT1G17970.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:6185032-6187202 FORWARD LENGTH=368
          Length = 368

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)

Query: 110 DATCIICREE---MTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           D  C IC++E        +L CGH FHVHC++ WL R++ CP C+
Sbjct: 317 DRKCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCK 361


>AT1G73760.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:27739366-27741161 REVERSE LENGTH=367
          Length = 367

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 104 EELNASDATCIICREE---MTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 154
           ++   +D  CIIC++E        +L CGH FH+ C+  WL R+++CP C+ + 
Sbjct: 310 QDTTVADRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCKTMA 363


>AT4G31450.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:15255955-15257977 REVERSE LENGTH=497
          Length = 497

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 107 NASDATCIICREEMTTAK---KLICGHLFHVHCLRSWLERQHTCPTCRA 152
           N  DA C IC+EE T      +L C H +HV C++ WL  +  CP C+A
Sbjct: 442 NKEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKA 490


>AT5G02750.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:620101-620952 FORWARD LENGTH=283
          Length = 283

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 107 NASDATCIICREEMTTAK---KLICGHLFHVHCLRSWLERQHTCPTCR 151
           NA +  C+IC+EEM+  +   ++ C H FH  C+  WL +++TCP CR
Sbjct: 208 NAGEVECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCR 255


>AT3G02340.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:477032-478261 FORWARD LENGTH=409
          Length = 409

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 104 EELNASDATCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCR 151
           EEL+  +  C +C++EM   +K   L C H +H  C+  WL  ++TCP CR
Sbjct: 326 EELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCR 376


>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
           chr2:17043642-17044628 FORWARD LENGTH=328
          Length = 328

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 106 LNASDATCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           L +SD+ C +C++E    + AK++ C H++H  C+  WL + ++CP CR
Sbjct: 183 LRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231


>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
           chr2:17043642-17044628 FORWARD LENGTH=328
          Length = 328

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 106 LNASDATCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           L +SD+ C +C++E    + AK++ C H++H  C+  WL + ++CP CR
Sbjct: 183 LRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231


>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
           chr2:17043642-17044628 FORWARD LENGTH=328
          Length = 328

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)

Query: 106 LNASDATCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           L +SD+ C +C++E    + AK++ C H++H  C+  WL + ++CP CR
Sbjct: 183 LRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 231


>AT5G15820.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:5161787-5162833 FORWARD LENGTH=348
          Length = 348

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 96  DRFPDA--TPEELNASDATCIICREEMT---TAKKLICGHLFHVHCLRSWLERQHTCPTC 150
           D  PD   T EEL++    C IC++E+      K+L C H +H  C+  WL  ++TCP C
Sbjct: 272 DGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVC 331

Query: 151 R 151
           R
Sbjct: 332 R 332


>AT3G20395.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:7112020-7113792 REVERSE LENGTH=223
          Length = 223

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 98  FPDATPEELNASDATCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCR 151
           F + +  +  +S + C+   EE    +KL  CGH FH++C+  WL RQ TCP CR
Sbjct: 159 FYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQETCPICR 213


>AT1G04790.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:1345469-1348143 FORWARD LENGTH=634
          Length = 634

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 64  LHLIRELYETFRNFKVRIA---DYIRYRKITSNMNDRFPDATPEELNASDATCIICREEM 120
           LH+ R+  E   ++++ +A   +  R+   ++N  +  P++T +  N  + TC+IC E  
Sbjct: 540 LHMDRDFTED--DYELLLALDENNHRHGGASANRINNLPESTVQTDNFQE-TCVICLETP 596

Query: 121 T---TAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 154
               T + L C H FH  C+  WL R  +CP C++ V
Sbjct: 597 KIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCKSSV 633


>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
           chr3:1477377-1478573 FORWARD LENGTH=398
          Length = 398

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 15/121 (12%)

Query: 43  LLHLSMYLCFFFLIFVNY--GIPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFP- 99
           +L  +++   FF I+  +  G+P   +           V  A     R +  ++ + FP 
Sbjct: 55  ILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAA----ARGLDVSVVETFPT 110

Query: 100 ----DATPEELNASDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCR 151
               D   ++L   +  C IC  E    + L     C H+FH HC+ +WLE   TCP CR
Sbjct: 111 FLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170

Query: 152 A 152
           A
Sbjct: 171 A 171


>AT3G56580.3 | Symbols:  | RING/U-box superfamily protein |
           chr3:20962563-20963525 FORWARD LENGTH=320
          Length = 320

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 102 TPEELNASDATCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           T + L +SD+ C +C++E    + AK++ C H++H  C+  WL + ++CP CR
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 227


>AT3G56580.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:20962563-20963525 FORWARD LENGTH=320
          Length = 320

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 102 TPEELNASDATCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           T + L +SD+ C +C++E    + AK++ C H++H  C+  WL + ++CP CR
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 227


>AT3G56580.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:20962563-20963525 FORWARD LENGTH=320
          Length = 320

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 102 TPEELNASDATCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           T + L +SD+ C +C++E    + AK++ C H++H  C+  WL + ++CP CR
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCR 227


>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
           chr5:7092663-7094310 REVERSE LENGTH=310
          Length = 310

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 108 ASDATCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCR 151
            ++A C IC+E +    K   L C H FH  CL+ WL+  ++CP CR
Sbjct: 225 GAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICR 271


>AT3G30460.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:12104433-12104876 FORWARD LENGTH=147
          Length = 147

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 113 CIICREEMTTAKKLI---CGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 160
           C ICREE+   ++L    C H +H  C+ +WL  ++TCP CR  V  P +G
Sbjct: 97  CAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCRHNVELPNHG 147


>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
           chr1:28668915-28669472 FORWARD LENGTH=185
          Length = 185

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 57/136 (41%), Gaps = 12/136 (8%)

Query: 28  EKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNYGIPLHLI--RELYETFRNFKVRIADYI 85
           E  P F   L LI  +L L    C   LI V+    L  I  R   +      V  A+  
Sbjct: 19  EASPPFNSDLVLILAVL-LCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKG 77

Query: 86  RYRKITSNMNDR--FPDATPEELNASDATCIICREEMTTAKKL----ICGHLFHVHCLRS 139
             +K+  ++      PD+ P E       C IC  E     +L     CGH FHV C+ +
Sbjct: 78  LKKKVLRSLPKLTYSPDSPPAE---KLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDT 134

Query: 140 WLERQHTCPTCRALVV 155
           WL    +CP+CR ++V
Sbjct: 135 WLGSHSSCPSCRQILV 150


>AT5G66070.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:26421923-26423033 FORWARD LENGTH=245
          Length = 245

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/143 (20%), Positives = 64/143 (44%), Gaps = 6/143 (4%)

Query: 14  YIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLS-MYLCFFFLIFVNYGIPLHLIRELYE 72
           Y+  V   L+ G+  ++ +    L  ++  + L  ++    F+I +N+ I    +  +  
Sbjct: 101 YLIDVIASLLSGRLVRERIGPAMLSAVQSQVQLPFLFFDASFIILLNFCINNKQMGAVES 160

Query: 73  TFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLI----C 128
            F++    I D    + +T +  +R P     + +    +C +C ++    + +     C
Sbjct: 161 QFQD-HTDIFDTAISKGLTGDSLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHC 219

Query: 129 GHLFHVHCLRSWLERQHTCPTCR 151
            H+FH+ C+  WL R  +CP CR
Sbjct: 220 HHMFHLPCIDKWLRRHASCPLCR 242


>AT4G12140.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:7266546-7267154 REVERSE LENGTH=202
          Length = 202

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%)

Query: 97  RFPDATPEEL---NASDATCIICREEMTTAKK-----LICGHLFHVHCLRSWLERQHTCP 148
           R      EEL   N    +C IC + + ++ K     + C H+FH  CL  WL+R++TCP
Sbjct: 134 RLGSMKAEELKSFNMETDSCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCP 193

Query: 149 TCRALV 154
            CR ++
Sbjct: 194 MCRTVL 199


>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
           chr5:25944338-25945342 REVERSE LENGTH=334
          Length = 334

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 113 CIICREEMT---TAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           C +C++ M    T KKL CGH +H  C+  WL  +++CP CR
Sbjct: 257 CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCR 298


>AT4G17245.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:9669383-9669883 FORWARD LENGTH=166
          Length = 166

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 14/84 (16%)

Query: 89  KITSNMNDRFPDATPE-------ELNASDATCIICREEMTTAKKLI----CGHLFHVHCL 137
           K   ++    PDA P         L  ++A CIIC  E      L     C H FHV+C+
Sbjct: 71  KPDPDLEATHPDAPPTLVYSPGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCI 130

Query: 138 RSWLERQH-TCPTCRALV--VPPE 158
           + WL   H +CPTCR  +   PP+
Sbjct: 131 QKWLSSSHSSCPTCRTNIFSSPPQ 154


>AT4G24015.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:12469887-12471197 REVERSE LENGTH=174
          Length = 174

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 104 EELNASDATCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALV 154
           EEL   D+ C +C  E    ++L+    C H+FH+ C+  WL   +TCP CR+ V
Sbjct: 96  EELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSV 150


>AT4G05350.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:2726910-2727530 REVERSE LENGTH=206
          Length = 206

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 16/93 (17%)

Query: 76  NFKVRIADYIRYRKITSNMND----------RFPDATPEELNASDATCIICREEMTTAKK 125
            F + +A  + YR ++   ND          R      + L      C IC E + +  K
Sbjct: 110 GFTLTMAATVTYRTVSVMSNDEKSLRMVLLGRMKAEEFKSLKMETEPCSICLESLVSGPK 169

Query: 126 ------LICGHLFHVHCLRSWLERQHTCPTCRA 152
                 + C H+FH  CL  WL+R++TCP CR 
Sbjct: 170 PRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRT 202


>AT3G48030.1 | Symbols:  | hypoxia-responsive family protein / zinc
           finger (C3HC4-type RING finger) family protein |
           chr3:17725410-17727954 REVERSE LENGTH=349
          Length = 349

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 113 CIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCR 151
           C +C  E +   KL    +C H FH+HC+ +WL    TCP CR
Sbjct: 207 CAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCR 249


>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
           chr3:20595300-20597188 REVERSE LENGTH=273
          Length = 273

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)

Query: 91  TSNMNDRFPDATPEELNASDA--TCIICREEMTTA---KKLICGHLFHVHCLRSWLERQH 145
           TS+  ++  D+  E    ++   TC +C E++T     + L C H FH  C+  WL +Q 
Sbjct: 187 TSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQG 246

Query: 146 TCPTCR 151
           TCP C+
Sbjct: 247 TCPVCK 252


>AT5G08139.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:2616487-2617617 FORWARD LENGTH=376
          Length = 376

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 70  LYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNASDAT--CIICREEMTTAKKLI 127
           L+E F + +V +   I     + +  +  P    E  N  D    C +C++EM    K +
Sbjct: 267 LFEQFADAEVSV---IGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAV 323

Query: 128 ---CGHLFHVHCLRSWLERQHTCPTCR 151
              C H +H  C+  WL+ ++TCP CR
Sbjct: 324 QLPCNHKYHSECIVPWLKVRNTCPVCR 350


>AT2G47560.1 | Symbols:  | RING/U-box superfamily protein |
           chr2:19511934-19512617 REVERSE LENGTH=227
          Length = 227

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 20/30 (66%)

Query: 128 CGHLFHVHCLRSWLERQHTCPTCRALVVPP 157
           CGH FHV C+ +W   + TCP CRA V PP
Sbjct: 127 CGHSFHVDCIDTWFRSRSTCPLCRAPVQPP 156


>AT4G40070.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:18576533-18577504 FORWARD LENGTH=323
          Length = 323

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 104 EELNASDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVPPEN 159
            ++ + D  C IC  E+   + +    IC HLFH+ C+ +WL    TCP CR+ +    N
Sbjct: 115 SKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSN 174


>AT2G42350.1 | Symbols:  | RING/U-box superfamily protein |
           chr2:17639245-17639898 FORWARD LENGTH=217
          Length = 217

 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 111 ATCIICREEMTTAKKLI-CGHLFHVHCLRSWLERQHTCPTCRALVVP 156
           A C+   EE   A+ L  C H+FHV C+ +WL  Q TCP CR    P
Sbjct: 101 AVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEP 147


>AT1G49220.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:18205946-18206701 FORWARD LENGTH=251
          Length = 251

 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%)

Query: 102 TPE-ELNASDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVV 155
           +PE  L   D  C+IC  +  + ++L     C H FHV C+  WL++  TCP CR  +V
Sbjct: 123 SPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLV 181


>AT1G26800.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:9285576-9286190 REVERSE LENGTH=204
          Length = 204

 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 100 DATP-EELNASDATCIICREE---MTTAKKLICGHLFHVHCLRSWLERQHTCPTCR 151
           DA P  E++  +  C+IC EE     T K++ C H FH  C+  WL    +CP CR
Sbjct: 99  DAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCR 154