Miyakogusa Predicted Gene

Lj2g3v2124850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124850.1 tr|G7K6I5|G7K6I5_MEDTR GTP pyrophosphokinase
OS=Medicago truncatula GN=MTR_5g007870 PE=4
SV=1,80,0,HD-domain/PDEase-like,NULL; Nucleotidyltransferase,NULL;
seg,NULL; HD_4,NULL; RelA_SpoT,RelA/SpoT; T,CUFF.38659.1
         (860 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54130.1 | Symbols: RSH3, AT-RSH3, ATRSH3 | RELA/SPOT homolog...   167   2e-41
AT3G14050.1 | Symbols: RSH2, AT-RSH2, ATRSH2 | RELA/SPOT homolog...   160   3e-39
AT4G02260.3 | Symbols: RSH1, AT-RSH1 | RELA/SPOT homolog 1 | chr...   138   1e-32
AT4G02260.1 | Symbols: RSH1, AT-RSH1, ATRSH1 | RELA/SPOT homolog...   137   2e-32
AT4G02260.2 | Symbols: RSH1, AT-RSH1 | RELA/SPOT homolog 1 | chr...   137   2e-32
AT3G17470.1 | Symbols: ATCRSH, CRSH | Ca2+-activated RelA/spot h...    62   1e-09

>AT1G54130.1 | Symbols: RSH3, AT-RSH3, ATRSH3 | RELA/SPOT homolog 3
           | chr1:20211177-20213761 FORWARD LENGTH=715
          Length = 715

 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/201 (48%), Positives = 120/201 (59%), Gaps = 12/201 (5%)

Query: 120 YTIFDDEKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILAALVPSSGKRAVDTVVAG 179
           + IF+DE V KA   A KAHRGQMR TG+PYL HC+ T  +LA +  +S       VVAG
Sbjct: 207 HKIFEDESVIKAFYEAEKAHRGQMRATGDPYLQHCVETAMLLADIGANS-----TVVVAG 261

Query: 180 ILHDVVDDACQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLRRHRRVSVNQGVLGQEEAS 239
           ILHD +DD+  S   I   FG  V  LV GVS+LS +++L R       N       EA 
Sbjct: 262 ILHDTLDDSFMSYDYILRTFGSGVADLVEGVSKLSQLSKLARE------NNTACKTVEAD 315

Query: 240 NLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWA 299
            L  M L M D  R VLIKLADRLHNM T+YALP  K Q  A+ETL I+  LA+RLG+ +
Sbjct: 316 RLHTMFLAMAD-ARAVLIKLADRLHNMMTLYALPPVKRQRFAKETLEIFAPLANRLGISS 374

Query: 300 LKSELEDLCFAVLQPQIFQKM 320
            K +LE+LCF  L P    +M
Sbjct: 375 WKVKLENLCFKHLHPDQHHEM 395



 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 9/109 (8%)

Query: 464 ISIDKVYDTRALRVVVGDKKGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSG 523
           +++D+++D   LR++V ++K          CY  L +VH+LW+ + G+  DYI +PK +G
Sbjct: 448 LTMDEIHDIHGLRLIVDNEKD---------CYKALGVVHKLWSEVPGKLKDYISHPKFNG 498

Query: 524 YQSLHTAVQGPDNSPLEVQIRTQRMHEYAEHGLAAHWLYKETGNPFSSI 572
           YQSLHT V G    PLEVQIRT+ MH  AE G AAHW YKE     SS 
Sbjct: 499 YQSLHTVVMGDGTIPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCKHSSF 547


>AT3G14050.1 | Symbols: RSH2, AT-RSH2, ATRSH2 | RELA/SPOT homolog 2
           | chr3:4650902-4653514 REVERSE LENGTH=709
          Length = 709

 Score =  160 bits (405), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/201 (46%), Positives = 118/201 (58%), Gaps = 12/201 (5%)

Query: 120 YTIFDDEKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILAALVPSSGKRAVDTVVAG 179
           + IF+DE V KA   A KAHRGQMR + +PYL HC+ T  +LA +  +S       VVAG
Sbjct: 203 HKIFNDESVIKAFYEAEKAHRGQMRASRDPYLQHCVETAMLLANIGANS-----TVVVAG 257

Query: 180 ILHDVVDDACQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLRRHRRVSVNQGVLGQEEAS 239
           +LHD +DD+  S   I   FG  V  LV GVS+LS +++L R       N       EA 
Sbjct: 258 LLHDTIDDSFMSYDYILRNFGAGVADLVEGVSKLSQLSKLARE------NNTACKTVEAD 311

Query: 240 NLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWA 299
            L  M L M D  R VLIKLADRLHNM+T+YAL   K Q  A+ETL I+  LA+RLG+  
Sbjct: 312 RLHTMFLAMAD-ARAVLIKLADRLHNMKTLYALSPVKQQRFAKETLEIFAPLANRLGIST 370

Query: 300 LKSELEDLCFAVLQPQIFQKM 320
            K +LE+LCF  L P    +M
Sbjct: 371 WKVQLENLCFKHLYPNQHNEM 391



 Score =  106 bits (265), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 9/109 (8%)

Query: 464 ISIDKVYDTRALRVVVGDKKGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSG 523
           +++D+++D   LR++V D +G         CY  L +VH LW+ + G+  DYI +PK +G
Sbjct: 444 LTVDEIHDIHGLRLIV-DNEGD--------CYKALGVVHSLWSEVPGKLKDYITHPKFNG 494

Query: 524 YQSLHTAVQGPDNSPLEVQIRTQRMHEYAEHGLAAHWLYKETGNPFSSI 572
           YQSLHT V      PLEVQIRTQ MH  AE G AAHW YKE G  +SS 
Sbjct: 495 YQSLHTVVMDNGTVPLEVQIRTQEMHLQAEFGFAAHWRYKEGGCKYSSF 543


>AT4G02260.3 | Symbols: RSH1, AT-RSH1 | RELA/SPOT homolog 1 |
           chr4:985451-990697 FORWARD LENGTH=816
          Length = 816

 Score =  138 bits (348), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 124/204 (60%), Gaps = 11/204 (5%)

Query: 126 EKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILAALVPSSGKRAVDTVVAGILHDVV 185
           E VQK +  A +AH GQ R++GEP++ H +   RIL  L     +   +++VAG+LHD V
Sbjct: 148 EFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILGEL-----ELDWESIVAGLLHDTV 202

Query: 186 DDA-CQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLRRHRRVSVNQGVLGQEEASNLRVM 244
           +D    + + IE EFG  V  +V G +++S + +L     +       +   +A +LR M
Sbjct: 203 EDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKL-----KCKTESETIQDVKADDLRQM 257

Query: 245 LLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWALKSEL 304
            L M D+ RV+++KLADRLHNMRT+  +P  K  ++A ETL ++  LA  LG++++KSEL
Sbjct: 258 FLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSEL 317

Query: 305 EDLCFAVLQPQIFQKMRADLASMW 328
           E+L F  +  + + ++ + +A+++
Sbjct: 318 ENLSFMYVSAEDYDRVTSRIANLY 341



 Score = 73.6 bits (179), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 465 SIDKVYDTRALRVVVGDKKGTLHGPAV---KCCYSLLDIVHRLWTPIDGEFDDYIINPKP 521
           SI+       LR+VV  K     GP     + CY +L +VH +W PI     DYI  PKP
Sbjct: 394 SINDYNQIAQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKP 453

Query: 522 SGYQSLHTAVQG---PDNSPLEVQIRTQRMHEYAEHGLAAHW 560
           +GYQSLHT V          LEVQIRT+ M   AE G+A ++
Sbjct: 454 NGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYY 495


>AT4G02260.1 | Symbols: RSH1, AT-RSH1, ATRSH1 | RELA/SPOT homolog 1
           | chr4:985451-991178 FORWARD LENGTH=884
          Length = 884

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 132/227 (58%), Gaps = 24/227 (10%)

Query: 116 DITGYTIFDD-------------EKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILA 162
           D+T  T+++D             E VQK +  A +AH GQ R++GEP++ H +   RIL 
Sbjct: 125 DVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILG 184

Query: 163 ALVPSSGKRAVDTVVAGILHDVVDDA-CQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLR 221
            L     +   +++VAG+LHD V+D    + + IE EFG  V  +V G +++S + +L  
Sbjct: 185 EL-----ELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKL-- 237

Query: 222 RHRRVSVNQGVLGQEEASNLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVA 281
              +       +   +A +LR M L M D+ RV+++KLADRLHNMRT+  +P  K  ++A
Sbjct: 238 ---KCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIA 294

Query: 282 EETLIIWCSLASRLGLWALKSELEDLCFAVLQPQIFQKMRADLASMW 328
            ETL ++  LA  LG++++KSELE+L F  +  + + ++ + +A+++
Sbjct: 295 GETLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLY 341



 Score = 72.8 bits (177), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 6/92 (6%)

Query: 475 LRVVVGDKKGTLHGPAV---KCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQSLHTAV 531
           LR+VV  K     GP     + CY +L +VH +W PI     DYI  PKP+GYQSLHT V
Sbjct: 405 LRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKPNGYQSLHTTV 464

Query: 532 QG---PDNSPLEVQIRTQRMHEYAEHGLAAHW 560
                     LEVQIRT+ M   AE G+A ++
Sbjct: 465 IPFLYESMFRLEVQIRTEEMDLIAERGIAVYY 496


>AT4G02260.2 | Symbols: RSH1, AT-RSH1 | RELA/SPOT homolog 1 |
           chr4:985451-991178 FORWARD LENGTH=883
          Length = 883

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 132/227 (58%), Gaps = 24/227 (10%)

Query: 116 DITGYTIFDD-------------EKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILA 162
           D+T  T+++D             E VQK +  A +AH GQ R++GEP++ H +   RIL 
Sbjct: 125 DVTVETLWEDLFPSISYLPRKELEFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILG 184

Query: 163 ALVPSSGKRAVDTVVAGILHDVVDDA-CQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLR 221
            L     +   +++VAG+LHD V+D    + + IE EFG  V  +V G +++S + +L  
Sbjct: 185 EL-----ELDWESIVAGLLHDTVEDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKL-- 237

Query: 222 RHRRVSVNQGVLGQEEASNLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVA 281
              +       +   +A +LR M L M D+ RV+++KLADRLHNMRT+  +P  K  ++A
Sbjct: 238 ---KCKTESETIQDVKADDLRQMFLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIA 294

Query: 282 EETLIIWCSLASRLGLWALKSELEDLCFAVLQPQIFQKMRADLASMW 328
            ETL ++  LA  LG++++KSELE+L F  +  + + ++ + +A+++
Sbjct: 295 GETLQVFAPLAKLLGMYSIKSELENLSFMYVSAEDYDRVTSRIANLY 341



 Score = 73.9 bits (180), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 465 SIDKVYDTRALRVVVGDKKGTLHGPAV---KCCYSLLDIVHRLWTPIDGEFDDYIINPKP 521
           SI+       LR+VV  K     GP     + CY +L +VH +W PI     DYI  PKP
Sbjct: 394 SINDYNQIAQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEIWKPIPRTVKDYIATPKP 453

Query: 522 SGYQSLHTAVQG---PDNSPLEVQIRTQRMHEYAEHGLAAHW 560
           +GYQSLHT V          LEVQIRT+ M   AE G+A ++
Sbjct: 454 NGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYY 495


>AT3G17470.1 | Symbols: ATCRSH, CRSH | Ca2+-activated RelA/spot
           homolog | chr3:5979868-5981968 FORWARD LENGTH=583
          Length = 583

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 492 KCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQSLHTAVQGPDNS---PL-EVQIRTQR 547
           K CY   +I+  LW  I     DYI  PK +GY+SLH AV   D+    PL E+QIRT  
Sbjct: 355 KACYRTSEIIRSLWKEIPHRTKDYIARPKENGYRSLHMAVDVSDSDQIRPLMEIQIRTMD 414

Query: 548 MHEYAEHGLAAHWLYK 563
           M   A  G A+H LYK
Sbjct: 415 MDGSANAGTASHSLYK 430