Miyakogusa Predicted Gene

Lj2g3v2124820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124820.1 Non Chatacterized Hit- tr|J3L112|J3L112_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G2,49.56,8e-18,seg,NULL; Tudor/PWWP/MBT,NULL; PWWP,PWWP; no
description,NULL,CUFF.38604.1
         (623 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03140.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   183   4e-46
AT3G21295.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   142   6e-34
AT1G51745.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   119   6e-27
AT1G51745.2 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...    56   6e-08

>AT3G03140.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr3:724348-727093 FORWARD LENGTH=769
          Length = 769

 Score =  183 bits (464), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 85/111 (76%), Positives = 89/111 (80%)

Query: 1   MESPGSAAVDCVVGSIVWVRRRNGSWWPGQIXXXXXXXXXXXXXPRSGTPVKLLGREDAS 60
           M SPGS AVD  VGSIVWVRRRNGSWWPG+I             PRSGTPVKLLGREDAS
Sbjct: 1   MASPGSGAVDWTVGSIVWVRRRNGSWWPGRILGQEDLDSTHITSPRSGTPVKLLGREDAS 60

Query: 61  VDWYNLEKSKRVKPFRCGEFDACIERAESAHGMPLKKREKYARREDAILHA 111
           VDWYNLEKSKRVKPFRCG+FD CIER ES+  M +KKREKYARREDAILHA
Sbjct: 61  VDWYNLEKSKRVKPFRCGDFDECIERVESSQAMIIKKREKYARREDAILHA 111



 Score =  166 bits (420), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 144/393 (36%), Positives = 201/393 (51%), Gaps = 40/393 (10%)

Query: 242 AISGDMPHLYRREPITCNEAVSKWQLKGKRNNRNLVKRSGVVSN-RKDGVLHGADVEGQR 300
           +ISGD  +LY + P      VS WQ KGKRN R L +RS       ++ +  G   E +R
Sbjct: 365 SISGDSSYLYSQNPNNEASTVSNWQHKGKRNFRTLPRRSARKRKLHRNRLEDGRYCEYKR 424

Query: 301 NHLNMRS-GSSLHYYR-NDYSDVLDEHD---QMFGLE-----DEYSPTPRAVAKK----- 345
                +  G  L +   ND SD  D+ D   + FG       D+Y  +   VA +     
Sbjct: 425 RAFGQKPMGYGLDFNGINDMSDGTDDTDPNERQFGDRMIVPGDDYQLS-NVVASRCKNIY 483

Query: 346 THHDVDWDECAWEDEPA--SRGYWDIKGFAPLYSDSYNSHGRNG-PMLVDVDLKVQANAS 402
           +H  +DWD+  WE       RG   ++G    +  S    GR     L+DVDL+V+   S
Sbjct: 484 SHDMLDWDDDPWEGRIGMKKRGEEKLEGLGQEFDVSERHFGRKTYSSLMDVDLEVRG--S 541

Query: 403 YRKNSVSFISITSELDGKSIIGHPIQIETLKDGSSDNLFSAIDDYSNDGFGFEGSAVLPP 462
           Y+K  V  +S+ S+L+G++IIGHP+++E L DGSS++    ID + N+    + + +LP 
Sbjct: 542 YQKGPVPIVSLMSKLNGRAIIGHPVEVEVLADGSSESYIQTIDYFGNETTYQDKTFLLPS 601

Query: 463 AWRTARRTANVRVPRPHILGAETVA------DFSL-DQERNTEYKKLNGGSFSHNKASLP 515
           AW+TARR+ N RVPR     +   A      D+SL DQ R    KKL  G FS++  S+ 
Sbjct: 602 AWKTARRS-NSRVPRLQPFSSSVEADDDATYDYSLADQGRKPLVKKLGLGHFSNDDNSVR 660

Query: 516 RKSGHNSVGP-----SINNKSFKKTPKKVSLSSSQKTRTLSSLSAE--HHSKKPSLGRSF 568
           R S      P       + +  KK  K  + ++SQKTR LSS S E  H+  K S  R+ 
Sbjct: 661 RNSSLRIPRPPAERKQQHQQQQKKLLKNTNATASQKTRALSSFSGEQGHNGMKASRDRTH 720

Query: 569 HQTERLTKPEVSGLTTVACIPVKLVFSRLLEKI 601
             + R   P   G  TVACIPVKLV+SRLLEKI
Sbjct: 721 ELSNRRVLP---GPPTVACIPVKLVYSRLLEKI 750


>AT3G21295.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr3:7489635-7492296 FORWARD LENGTH=645
          Length = 645

 Score =  142 bits (359), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 66/104 (63%), Positives = 76/104 (73%)

Query: 8   AVDCVVGSIVWVRRRNGSWWPGQIXXXXXXXXXXXXXPRSGTPVKLLGREDASVDWYNLE 67
           A+D  VG +VWVRRRNG+WWPG+I             P+SGTP+KLLGR+DASVDWYNLE
Sbjct: 11  AIDASVGGLVWVRRRNGAWWPGRIMAHHEVPDGTIVSPKSGTPIKLLGRDDASVDWYNLE 70

Query: 68  KSKRVKPFRCGEFDACIERAESAHGMPLKKREKYARREDAILHA 111
           KSKRVK FRCGE+DACI  A++      KK  KYARREDAI HA
Sbjct: 71  KSKRVKAFRCGEYDACIATAKATASTTGKKAVKYARREDAIAHA 114



 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 7/85 (8%)

Query: 366 YWDIKGFAP--LYSDSYNSHGRNGPMLVDVDLKVQANASYRKNSVSFISITSELDGKSII 423
           +W +    P  L+S    + GRN  +    D+K++  A+Y+  +V  IS+ S+L+G++I+
Sbjct: 466 HWSVSDQKPRSLFSVGTQAMGRNSELY---DVKIEVKANYKPRNVPLISLRSKLNGEAIV 522

Query: 424 GHPIQIETLKDGSSDNLFSA--IDD 446
           GHP  +E L+DGS  ++ S+  IDD
Sbjct: 523 GHPSVVEVLEDGSCGHIVSSHRIDD 547


>AT1G51745.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr1:19192055-19194375 FORWARD LENGTH=563
          Length = 563

 Score =  119 bits (298), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 69/104 (66%), Gaps = 2/104 (1%)

Query: 8   AVDCVVGSIVWVRRRNGSWWPGQIXXXXXXXXXXXXXPRSGTPVKLLGREDASVDWYNLE 67
           A++  VG +VWVRRRNGSWWPGQ              P+ GTP+KLLGR+D SVDWY LE
Sbjct: 11  AINASVGRLVWVRRRNGSWWPGQTLVHDQVPDNSLVGPKVGTPIKLLGRDDVSVDWYILE 70

Query: 68  KSKRVKPFRCGEFDACIERAESAHGMPLKKREKYARREDAILHA 111
            SK VK FRCGE+D CIE+A+++     K+  K   REDAI +A
Sbjct: 71  NSKTVKAFRCGEYDTCIEKAKASSSK--KRSGKCTLREDAINNA 112


>AT1G51745.2 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr1:19192236-19194375 FORWARD LENGTH=504
          Length = 504

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 4/54 (7%)

Query: 59  ASVDWYNLEKSKRVKPFRCGEFDACIERAESAHGMPLKKRE-KYARREDAILHA 111
           A  DWY LE SK VK FRCGE+D CIE+A+++     KKR  K   REDAI +A
Sbjct: 3   ACEDWYILENSKTVKAFRCGEYDTCIEKAKASSS---KKRSGKCTLREDAINNA 53