Miyakogusa Predicted Gene

Lj2g3v2124630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124630.1 Non Chatacterized Hit- tr|F6HEH2|F6HEH2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80,3e-17,seg,NULL; PDZ,PDZ domain; RUBREDOXIN_LIKE,Rubredoxin-like
domain; no description,NULL; no descriptio,CUFF.38603.1
         (278 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17170.1 | Symbols: ENH1 | rubredoxin family protein | chr5:5...   291   3e-79
AT5G17170.2 | Symbols: ENH1 | rubredoxin family protein | chr5:5...   204   4e-53
AT5G51010.1 | Symbols:  | Rubredoxin-like superfamily protein | ...    61   1e-09

>AT5G17170.1 | Symbols: ENH1 | rubredoxin family protein |
           chr5:5649335-5650975 FORWARD LENGTH=271
          Length = 271

 Score =  291 bits (746), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 147/209 (70%), Positives = 165/209 (78%), Gaps = 5/209 (2%)

Query: 40  QKTSFQGLSIVEAKRGVSDSFLGVGENYKNGSSSSIARRRLEITAKTAGASKTIEAEVDK 99
           QKT FQG+S+ ++K+ VS+ F  V E    G +     RR EI A+ A ASKTIE EVDK
Sbjct: 38  QKTVFQGVSLEDSKKSVSEIF-AVSERKIGGLN---GLRRFEIKARAA-ASKTIEVEVDK 92

Query: 100 PLGLTLGQKPTGGVVITAVEXXXXXXXXXXXXXDQVLYTSSFFGDELWPADKLGFTKTAI 159
           PLGLTLGQK  GGVVIT V+             DQV+YTSSFFGDELWPADKLGFTKTAI
Sbjct: 93  PLGLTLGQKQGGGVVITGVDGGGNAAKAGLKSGDQVVYTSSFFGDELWPADKLGFTKTAI 152

Query: 160 QAKPDSVYFVVSRGAEVDVKRLPKRPAPPRFGRKLTDAQKARATHICLDCGFIYTLQKPF 219
           QAKPDSVYFVVSRGAEVDVK+L KRPAPPRFGRKLT+ QKARATHICLDCGFIYTL K F
Sbjct: 153 QAKPDSVYFVVSRGAEVDVKKLNKRPAPPRFGRKLTETQKARATHICLDCGFIYTLPKSF 212

Query: 220 EEQPESYICPQCQAPKKRFSPYDVNTGRA 248
           +EQP++Y+CPQC APKKRF+ YDVNTG+A
Sbjct: 213 DEQPDTYVCPQCIAPKKRFAKYDVNTGKA 241


>AT5G17170.2 | Symbols: ENH1 | rubredoxin family protein |
           chr5:5649335-5650835 FORWARD LENGTH=224
          Length = 224

 Score =  204 bits (520), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 110/169 (65%), Positives = 123/169 (72%), Gaps = 5/169 (2%)

Query: 39  CQKTSFQGLSIVEAKRGVSDSFLGVGENYKNGSSSSIARRRLEITAKTAGASKTIEAEVD 98
            QKT FQG+S+ ++K+ VS+ F  V E    G +     RR EI A+ A ASKTIE EVD
Sbjct: 37  SQKTVFQGVSLEDSKKSVSEIF-AVSERKIGGLN---GLRRFEIKARAA-ASKTIEVEVD 91

Query: 99  KPLGLTLGQKPTGGVVITAVEXXXXXXXXXXXXXDQVLYTSSFFGDELWPADKLGFTKTA 158
           KPLGLTLGQK  GGVVIT V+             DQV+YTSSFFGDELWPADKLGFTKTA
Sbjct: 92  KPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKSGDQVVYTSSFFGDELWPADKLGFTKTA 151

Query: 159 IQAKPDSVYFVVSRGAEVDVKRLPKRPAPPRFGRKLTDAQKARATHICL 207
           IQAKPDSVYFVVSRGAEVDVK+L KRPAPPRFGRKLT+ QKA+     L
Sbjct: 152 IQAKPDSVYFVVSRGAEVDVKKLNKRPAPPRFGRKLTETQKAKLLTFVL 200


>AT5G51010.1 | Symbols:  | Rubredoxin-like superfamily protein |
           chr5:20744615-20745344 FORWARD LENGTH=154
          Length = 154

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 4/54 (7%)

Query: 188 PRFGRKLTDAQKARATHICLDCGFIYTLQKPFEEQPESYICPQCQAPKKRFSPY 241
           PRF  +++  Q     +IC DCG+IY  + PF++ P++Y CP C APK+RF  Y
Sbjct: 52  PRFSMRVSSKQ----AYICRDCGYIYNDRTPFDKLPDNYFCPVCAAPKRRFRAY 101