Miyakogusa Predicted Gene
- Lj2g3v2124290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2124290.1 Non Chatacterized Hit- tr|C5Z8R8|C5Z8R8_SORBI
Putative uncharacterized protein Sb10g028420
OS=Sorghu,25.42,2e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat;
seg,NU,CUFF.38586.1
(515 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 343 1e-94
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 9e-46
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 179 3e-45
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 169 3e-42
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 166 4e-41
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 5e-41
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 2e-40
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 7e-40
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 7e-40
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 160 3e-39
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 158 8e-39
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 8e-39
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 156 3e-38
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 7e-38
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 154 1e-37
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 3e-36
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 142 4e-34
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 142 7e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 7e-34
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 7e-34
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 142 8e-34
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 141 8e-34
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 5e-33
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 137 2e-32
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 3e-32
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 136 4e-32
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 136 4e-32
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 4e-32
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 5e-32
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 129 4e-30
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 127 2e-29
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 125 6e-29
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 121 1e-27
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 116 4e-26
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 114 1e-25
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 5e-23
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 105 6e-23
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 105 8e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 5e-22
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 100 4e-21
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 6e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 99 7e-21
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 99 8e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 8e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 91 3e-18
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 90 5e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 89 7e-18
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 87 2e-17
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 87 3e-17
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 87 3e-17
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 87 4e-17
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 86 7e-17
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 85 9e-17
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 84 3e-16
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 83 4e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 82 1e-15
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 81 2e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 79 5e-15
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 79 6e-15
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 77 2e-14
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 77 3e-14
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 77 3e-14
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 77 4e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 77 4e-14
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 75 8e-14
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 75 9e-14
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 74 3e-13
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 74 3e-13
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 73 4e-13
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 72 7e-13
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 72 9e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 72 1e-12
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 70 2e-12
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 70 3e-12
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 6e-12
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 69 7e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 68 1e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 67 4e-11
AT3G42560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 66 6e-11
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 66 7e-11
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 66 7e-11
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 64 2e-10
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 64 2e-10
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 64 2e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 62 1e-09
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 59 6e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 1e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 55 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 53 5e-07
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 256/441 (58%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R EL + + +I K G+ +A+ LL +A G + + +I AL + G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
RT EA+ LF+E+ G+KPR YN EM G+ TY
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
+L+D +V+AGR E + EM+ QPNSFV+S+++ +RD G W+K +VL+E++
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ D YN +IDTFGK+ L A+ F +M EG+ P+ VTWN+LI HC+ G + A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
+F M+ +G P + +I+ G+Q +WD +K+ M S+G + LVD+
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
+G+ G+F +A EC++ +KS G+ S ++ AL NAYAQ+GL EQA+ ++M +G++P+
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPS 618
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
++ LN LINAF R EA +V ++KE+GV PD+VTYTTLMKA IR KF +VP++Y+
Sbjct: 619 LLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYE 678
Query: 487 RMETDGCTPDRKAKQMLQDAL 507
M GC PDRKA+ ML+ AL
Sbjct: 679 EMIMSGCKPDRKARSMLRSAL 699
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 159/359 (44%), Gaps = 37/359 (10%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWK-KATEVLE 241
TY L+ +E + I +M+ G+Q + YS ++ L R N + + +
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALK---------------------------- 273
EI K+ LD + N II F K G+ +AL+
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 274 -------LFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
LF ++++ G++P +N+L+K + + G A ++ S+M+++G+ PD +
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
+I G+W++ + + M + + V++ L+ F G++Q + ++ +KS
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 387 GVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
GV + + + + + + A+ M EGIEP+ V N LI+ GR++ A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
++ ++ G P TY ++ ++ +++D++ + +M++ G P+ L D
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 37/297 (12%)
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW--------------- 290
+K +L YN++I + ++ +AL L KM+++G + + V +
Sbjct: 191 QKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDS 250
Query: 291 ----------------------NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
N +I + GD +KAL L Q GL V+I
Sbjct: 251 VMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSI 310
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
IS L + G+ + FE + G K Y L+ + + G ++AE V ++ GV
Sbjct: 311 ISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 370
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + L +AY G E A VL+ ME ++PN + + L+ F + G + +
Sbjct: 371 SPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQ 430
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
V +K GV PD Y ++ F + D + RM ++G PDR L D
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 117/253 (46%), Gaps = 38/253 (15%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+Y+ +I G+ +L EA F+ QK+ + P +T+N+LI R D KALNL + M
Sbjct: 169 LYSILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKM 223
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
++ G D + +I L K D++ +L+ ++ + +
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSV--------------------MLLRLYKEIER- 262
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
L+ + LV+ I +A+ G +A+++L + + G+ L +
Sbjct: 263 -------DKLELDVQLVNDIIM-----GFAKSGDPSKALQLLGMAQATGLSAKTATLVSI 310
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
I+A +++GR +EA +++ +++SG+ P Y L+K +++T + + ME G
Sbjct: 311 ISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGV 370
Query: 494 TPDRKAKQMLQDA 506
+PD +L DA
Sbjct: 371 SPDEHTYSLLIDA 383
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 207/429 (48%)
Query: 68 APRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGR 127
A + G E + +S L++ C EG + A++L+ +M + + + + LI L GR
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 128 TSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEI 187
SEA +L M+ G +P Y +M + I + Y I
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
++D G +D S NEM+MKG + + YS ++G ++G W ++L E+ R
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
I D ++++ID F K G+L EA +L+ +M G+ P+ +T+NSLI C+E +A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+F M +G PD + +I+ + + D + F ++S+G Y LV F
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
Q GK A+E Q + S GV S + L + G +A+++ + M+ + I
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
+ N++I+ NA + +A S++ + + GV PD+VTY ++ + E +++++
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 488 METDGCTPD 496
M+ DGCTPD
Sbjct: 551 MKEDGCTPD 559
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 159/324 (49%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ L++ F GR+ + + ++ M +P+ S ++ G +A +++ +
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
E D Y +++ K G AL LF KM++ ++ ++V ++ +I C++G +
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
AL+LF++M+ +G+ D + ++I L GKWD K M R ++ L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+D+F + GK A+E + + G+ + +L + + ++ +A ++ +M +G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
EP+IV ++LIN++ A R + M ++ I G+ P+ +TY TL+ F ++ K +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 484 IYKRMETDGCTPDRKAKQMLQDAL 507
+++ M + G P +L D L
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGL 465
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 157/360 (43%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS +I CK+G+ D A+SL +ME G + +Y+ LI L N G+ + + +EMI
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P + ++ EM+ GI TY L+D F L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + M KG +P+ YS ++ Y + EI + + +T YN+++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F + G+L A +LF +M GV P++VT+ L+ C G+ KAL +F MQ+ +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
I+ II + K D F S++ +G K Y V++ + G A+
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ +K +G + L A+ ++++++ M+ G + + M+I+ S+
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 152/321 (47%)
Query: 176 SGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK 235
+GI T I+++ + +L +S + G++P++ +S +V + G +
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
A +++ + E K D +++I+ G + EAL L +M + G +P+ VT+ ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
C+ G+ AL+LF M+E+ + + +I L + G +D F M +G K
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
Y+ L+ GK+ + + ++ + ++ F AL + + ++G +A ++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
M GI P+ + N LI+ F EA ++ + G PD+VTY+ L+ ++ +
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 476 KKFDEVPIIYKRMETDGCTPD 496
K+ D+ +++ + + G P+
Sbjct: 399 KRVDDGMRLFREISSKGLIPN 419
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 111/291 (38%), Gaps = 35/291 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+S LI KEG L A L +M G + +Y LI+ EA+ +F M+
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G +P + Y+I E+ G+ TY L+ F +G+L
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
EM +G P+ Y ++ DNG KA E+ E++++ +++L IYN II
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 260 DT-----------------------------------FGKYGELGEALKLFVKMQKEGVR 284
K G L EA LF KM+++G
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
P+ T+N LI+ H ++ L +M+ G D +I L ++
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/219 (18%), Positives = 94/219 (42%)
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
M+ G+ ++ T +I +CR+ A ++ + G PD F T+++ +G+
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
+ M + + L++ G+ A + + G +
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
+ N + G A+ + + ME I+ ++V +++I++ G + +A+S+++ ++ G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 458 VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ D+VTY++L+ K+D+ + + M PD
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 64/161 (39%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y L+ C G L++A+ + +M+ L Y +I + N + +A LF +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+KP + YN+ +M + G TY IL+ + L
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
+ I EMK+ GF +S ++ + D + K ++L
Sbjct: 578 SSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 202/428 (47%), Gaps = 46/428 (10%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
L + + +IS KEG + A ++ ++ GF L YSYT LI A N GR EA +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
FK+M G KP L YN ++L+ F
Sbjct: 231 FKKMEEDGCKPTLITYN-----------------------------------VILNVF-- 253
Query: 195 AGRLEDTW----STINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
G++ W S + +MK G P+++ Y+ ++ + + ++A +V EE++ S
Sbjct: 254 -GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY 312
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D YN+++D +GK EA+K+ +M G P+IVT+NSLI + R+G +A+ L
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+ M E+G PD + T++S GK ++ FE M + G K + + ++G
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
GKF + + G +SP+I L + Q G+ + V + M+ G P
Sbjct: 433 GKFTEMMKIFDEINVCG--LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
N LI+A+S G + +AM+VY + ++GV+PDL TY T++ A R +++ + M
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 489 ETDGCTPD 496
E C P+
Sbjct: 551 EDGRCKPN 558
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 186/434 (42%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LIS ++G LD AM L QM G + ++YT L+ G+ A +F+EM
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G KP + +N E+ G+ T+ LL F G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ EMK GF P ++ ++ Y G +++A V + + ++ D YN+++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ G ++ K+ +M+ +PN +T+ SL+ + + +L ++ +
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P + T++ + ++ F + RG +V I+G+ A
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ +K G S + +L +++ ++ ++L+ + +GI+P+I+ N +I A+
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
R +A ++ ++ SG+ PD++TY T + ++ F+E + + M GC P++
Sbjct: 712 NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNT 771
Query: 500 KQMLQDALTALERR 513
+ D L R+
Sbjct: 772 YNSIVDGYCKLNRK 785
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 148/325 (45%), Gaps = 5/325 (1%)
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
I++ GR+ + N ++ GF + + Y+ ++ + ++G +++A V +++ E
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFV-KMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
YN I++ FGK G + V KM+ +G+ P+ T+N+LI R + +
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
A +F +M+ G D + ++ G+ + K M G Y L+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 366 IFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ + G A E + +G P++F L + + + G E A+ + + M G
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGT--KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
+PNI N I + N G++ E M ++ I G+SPD+VT+ TL+ F + EV
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 484 IYKRMETDGCTPDRKAKQMLQDALT 508
++K M+ G P+R+ L A +
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYS 500
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 1/280 (0%)
Query: 218 FVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVK 277
+ K +G ++ + +A + + ++ + LD + II GK G + A +F
Sbjct: 139 LAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNG 198
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQG- 336
+Q++G ++ ++ SLI G Y +A+N+F M+E G P + I++ G+ G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 337 KWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC 396
W+ I E M S G Y L+ + Q A + + +K+ G +
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
AL + Y + ++A+KVL M G P+IV N LI+A++ G EAM + + + E
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G PD+ TYTTL+ F R K + I++ M GC P+
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 138/323 (42%), Gaps = 8/323 (2%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G E ++ LIS + G+ ++AM++ +M G +Y ++ AL G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+++ + EM KP L E V SG+ R
Sbjct: 539 MWEQSEKVLAEMEDGRCKPN-ELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA--- 594
Query: 187 ILLDYFV----SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
+LL V L + +E+K +GF P+ + +V +Y M KA VL+
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
++ER + YNS++ + + G++ ++ ++ +G++P+I+++N++I +CR
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
A +FS+M+ G+ PD + T I ++ M G + Y
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 363 LVDIFGQYGKFQNAEECVQALKS 385
+VD + + + A+ V+ L++
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLRN 797
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 209/456 (45%), Gaps = 4/456 (0%)
Query: 44 NLWIRNKVVNSESDTKTTLFPNPEAPRPGEE-LSSEF--YSQLISKCCKEGNLDRAMSLL 100
N++ NK+VN N + E L +F Y+ LI C+ +LD A +
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 101 AQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXX 160
+M G + + +YTHLI L R EA LF +M P + Y +
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 161 XXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVY 220
EM ++GI TY +L+D S + E + +M KG PN Y
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 221 SKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQK 280
+ ++ Y GM + A +V+E + RK+S +T YN +I + K + +A+ + KM +
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLE 455
Query: 281 EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDT 340
V P++VT+NSLI CR G++ A L S M ++GL PD + ++I L + + +
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 341 IKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALAN 400
F+S+ +G +Y L+D + + GK A ++ + S+ L + F AL +
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 401 AYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSP 460
G ++A + + M G++P + +LI+ G + A S + + SG P
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 461 DLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
D TYTT ++ + R + + + +M +G +PD
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 151/328 (46%), Gaps = 1/328 (0%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y LL+ G +++ EM PN + Y+K+V Y G ++A + + +I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
E + D Y S+I + + +L A K+F +M +G R N V + LI C
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
+A++LF M++ +P + + +I L + + M G K Y VL+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
D KF+ A E + + +G++ + + AL N Y ++G+ E A+ V+++ME +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
PN N LI + + + +AM V + + E V PD+VTY +L+ R+ FD +
Sbjct: 426 PNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 485 YKRMETDGCTPDRKAKQMLQDALTALER 512
M G PD+ + D+L +R
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 183/426 (42%), Gaps = 22/426 (5%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI C + ++A LL QM G + +Y LI G +A + + M
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
L P YN +M++ + TY L+D +G +
Sbjct: 421 SRKLSPNTRTYN-ELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++ M +G P+ + Y+ ++ + ++A ++ + + ++ ++ + +Y ++I
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D + K G++ EA + KM + PN +T+N+LI C +G +A L M + GL
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P +I L + G +D F+ M S G K Y + + + G+ +AE+
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 380 VQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ ++ G VSP++F +L Y G A VL+ M G EP+ + F
Sbjct: 660 MAKMRENG--VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS-------QHTF 710
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
+ +++ M + K+ G P+L + +M +FD V + ++M TP+
Sbjct: 711 LSLIKHLLEMK---YGKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNA 760
Query: 498 KAKQML 503
K+ + L
Sbjct: 761 KSYEKL 766
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 181/432 (41%), Gaps = 6/432 (1%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEA-----LGFQLSSYSYTHLIEALGNVGRTSEADMLFKE 137
+I C G+ + L +M L ++L Y L+ +L G E ++ E
Sbjct: 149 MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME 208
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
M+ + P + YN ++V++G+ TY L+ +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
L+ + NEM +KG + N Y+ ++ +A ++ ++++ + Y
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+I + EAL L +M++ G++PNI T+ LI C + + KA L M E+G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
L P+ + +I+ ++G + E M SR Y L+ + + A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAM 447
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ + VL + +L + + G + A ++L +M G+ P+ +I++
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
+ R EA ++ +++ GV+P++V YT L+ + + K DE ++ ++M + C P+
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 498 KAKQMLQDALTA 509
L L A
Sbjct: 568 LTFNALIHGLCA 579
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 147/363 (40%), Gaps = 19/363 (5%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ LI CK G +D A +L +M + +S ++ LI L G+ EA +L ++M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
+ GL+P ++ I +M+ SG TY + + GRL
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
D + +M+ G P+ F YS ++ Y D G A +VL+ +R+ H + S+
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 259 IDTF--GKYG----------------ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
I KYG E ++L KM + V PN ++ LI C
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 301 GDYTKALNLFSDMQE-QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
G+ A +F MQ +G+ P +F ++SC + K + K + M G+
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
VL+ + G+ + Q L G + + + +QGL E ++ +ME
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Query: 420 GEG 422
G
Sbjct: 894 KNG 896
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 197/456 (43%), Gaps = 72/456 (15%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI C+ GN D A LL+ M G ++YT +I++L R EA LF +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P + +Y L+D + AG+++
Sbjct: 525 QKGVNPNVVMYTA-----------------------------------LIDGYCKAGKVD 549
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS-- 257
+ + +M K PNS ++ ++ +G K+AT +LEE + KI L +
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT-LLEE-KMVKIGLQPTVSTDTI 607
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+I K G+ A F +M G +P+ T+ + I+ +CREG A ++ + M+E G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 318 LYPDPKIFVTIISCLGEQGK----WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
+ PD + ++I G+ G+ +D +K+ ++ + ++ L+++ +YGK
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM--KYGKQ 725
Query: 374 QNAEECVQALKS----EGVL----------VSPNIFCALANAYAQQ--GLCEQ-----AI 412
+ +E + A+ + + V+ V+PN A +Y + G+CE A
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN-----AKSYEKLILGICEVGNLRVAE 780
Query: 413 KVLQIME-GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
KV M+ EGI P+ ++ N L++ ++ EA V + G P L + L+
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ + + +++ + G D A +++ D +
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 35/153 (22%)
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
L N+ A+ GL ++ +V M + + PNI N ++N + G EA I E+
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 457 GVSPDLVTYTTLMKAFIRTKK-------FDEVPI-------------------------- 483
G+ PD TYT+L+ + + K F+E+P+
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 484 --IYKRMETDGCTPDRKAKQMLQDALTALERRS 514
++ +M+ D C P + +L +L ER+S
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 195/416 (46%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ L++ C + A+SL+ QM +G+Q S+++ LI L R SEA L M+
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +P L Y I +M I Y ++D + + D
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ EM KG +PN Y+ ++ + G W A+ +L ++ ERKI+ + ++++ID
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F K G+L EA KL+ +M K + P+I T++SLI C +A ++F M + +P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + T+I + + D + F M+ RG Y L+ F Q + NA+
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+ + S+GVL + L + G E A+ V + ++ +EP+I N++I A
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G+ + ++ + GV P++VTYTT+M F R +E +++ M+ +G PD
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 216/488 (44%), Gaps = 57/488 (11%)
Query: 37 PNSLNSSNLWIR--------------NKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQ 82
P S + + W+R N++ + + D LF + RP + +S+
Sbjct: 29 PPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVE--FSK 86
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG 142
L+S K D +SL QM+ LG + Y+Y+ LI + S A + +M+ G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTW 202
+P + T LL+ F R+ D
Sbjct: 147 YEPDI-----------------------------------VTLNSLLNGFCHGNRISDAV 171
Query: 203 STINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDT 261
S + +M G+QP+SF ++ ++ GL+R N +A +++ + + D Y +++
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHN-RASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 262 FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPD 321
K G++ AL L KM++ + P +V +N++I C + ALNLF++M +G+ P+
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 322 PKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQ 381
+ ++I CL G+W + M R ++ L+D F + GK AE+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 382 ALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ + P+IF +L N + ++A + ++M + PN+V N LI F
Sbjct: 351 EMIKRSI--DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
A R E M ++ + + G+ + VTYTTL+ F + ++ D I++K+M +DG PD
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 500 KQMLQDAL 507
+L D L
Sbjct: 469 YSILLDGL 476
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 154/362 (42%), Gaps = 35/362 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +++ CK G++D A+SLL +ME + Y +I+AL N ++A LF EM
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P + YN +M++ I T+ L+D FV G+L
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVG------------------LYRD--------NGMW 233
+ +EM + P+ F YS ++ + +D N +
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 403
Query: 234 K---------KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
K + E+ E+ +R + +T Y ++I F + E A +F +M +GV
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
P+I+T++ L+ C G AL +F +Q + PD + +I + + GK +
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ 404
F S++ +G K Y ++ F + G + A+ + +K EG L + L A+ +
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 405 QG 406
G
Sbjct: 584 DG 585
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 125/306 (40%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI C G A LL+ M + +++ LI+A G+ EA+ L+ EMI
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P + Y+ M+ + TY L+ F A R++
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ EM +G N+ Y+ ++ + A V +++ + D Y+ ++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D G++ AL +F +Q+ + P+I T+N +I+ C+ G +LF + +G+
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + T++S +G + F M G Y L+ + G + E
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 380 VQALKS 385
++ ++S
Sbjct: 594 IREMRS 599
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 197/418 (47%), Gaps = 4/418 (0%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S L++ C + A++L+ QM G+Q ++ ++ LI L + SEA L M+
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +P L Y + +M + Y ++D ++D
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ EM+ KG +PN YS ++ + G W A+ +L ++ ERKI+ D ++++ID
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F K G+L EA KL+ +M K + P+IVT++SLI C +A +F M + +P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D + T+I + + + + F M+ RG Y +L+ Q G A+E
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 381 QALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ + S+GV PNI + L + + G E+A+ V + ++ +EP I N++I
Sbjct: 455 KEMVSDGV--PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
AG+ + ++ ++ GV PD+V Y T++ F R +E ++K M+ DG P+
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 196/461 (42%), Gaps = 39/461 (8%)
Query: 48 RNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALG 107
RN + + D LF RP + +S+L+S K D +SL QM+ LG
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIE--FSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 108 FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXX 167
+ Y+Y+ LI + A + +M+ G +P +
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI-------------------- 151
Query: 168 XXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GL 226
T LL+ + + R+ + + +++M + G+QPN+ ++ ++ GL
Sbjct: 152 ---------------VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
+ N +A +++ + + D Y +++ K G+ A L KM++ + P
Sbjct: 197 FLHNKA-SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
++ +N++I C+ ALNLF +M+ +G+ P+ + ++ISCL G+W +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
M R ++ L+D F + GK AE+ + + S + +L N +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYT 466
++A ++ + M + P++V N LI F R E M V+ + + G+ + VTY
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
L++ + D I+K M +DG P+ L D L
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 184/428 (42%), Gaps = 35/428 (8%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +++ CK G+ D A +LL +ME + Y +I+ L +A LFKEM
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P + Y+ +M++ I T+ L+D FV G+L
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +EM + P+ YS ++ + + +A ++ E + + D YN++I
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F KY + E +++F +M + G+ N VT+N LI+ + GD A +F +M G+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + T++ L + GK + FE + + Y ++++ + GK ++ +
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD- 522
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+FC L+ +G++P++V N +I+ F
Sbjct: 523 --------------LFCNLSL--------------------KGVKPDVVAYNTMISGFCR 548
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
G EA +++ +KE G P+ Y TL++A +R + + K M + G D
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Query: 500 KQMLQDAL 507
++ + L
Sbjct: 609 IGLVTNML 616
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 64/161 (39%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ CK G L++AM + ++ + + Y+Y +IE + G+ + LF +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+KP + YN EM + G Y L+ + G E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
+ I EM+ GF ++ + + D + K ++L
Sbjct: 589 ASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 629
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 196/418 (46%), Gaps = 4/418 (0%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ L++ C + A++L+ QM +G+Q + ++T L+ L + SEA L + M+
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +P L Y +M I Y ++D ++D
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ EM KG +P+ F YS ++ + G W A+ +L ++ ERKI+ + +NS+ID
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F K G+L EA KLF +M + + PNIVT+NSLI C +A +F+ M + P
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D + T+I+ + K + F M+ RG Y L+ F Q NA+
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 381 QALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ + S+G V PNI + L + + G E+A+ V + ++ +EP+I N++
Sbjct: 439 KQMVSDG--VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
AG+ + ++ + GV PD++ Y T++ F + +E ++ +M+ DG PD
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 202/467 (43%), Gaps = 51/467 (10%)
Query: 48 RNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALG 107
RN +++ + D LF RP + +S+L+S K D +S +ME LG
Sbjct: 38 RNALLHLKLDEAVDLFGEMVKSRPFPSIVE--FSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 108 FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXX 167
+ Y+Y +I L + S A + +M+ G P + N
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 168 XXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLY 227
+MV+ G T+ L+ + + + + M +KG QP+ Y ++
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI--- 212
Query: 228 RDNGMWKK-----ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG 282
NG+ K+ A +L ++ + KI D IY+++ID+ KY + +AL LF +M +G
Sbjct: 213 --NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 283 VRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIK 342
+RP++ T++SLI C G ++ A L SDM E+ + P+ F ++I ++GK +
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 343 KCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALAN 400
K F+ M R + PNI + +L N
Sbjct: 331 KLFDEMIQRS-------------------------------------IDPNIVTYNSLIN 353
Query: 401 AYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSP 460
+ ++A ++ +M + P++V N LIN F A + ++ M ++ + G+
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 461 DLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ VTYTTL+ F + D +++K+M +DG P+ L D L
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 168/398 (42%), Gaps = 41/398 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +I+ CK G D A++LL +ME + Y+ +I++L +A LF EM
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P + Y+ +M++ I T+ L+D F G+L
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +EM + PN IV YNS+I
Sbjct: 328 EAEKLFDEMIQRSIDPN------IV-----------------------------TYNSLI 352
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ F + L EA ++F M + P++VT+N+LI C+ + LF DM +GL
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE-- 377
+ + T+I + D + F+ M S G Y L+D + GK + A
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 378 -ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
E +Q K E + + NI ++ + G E + + +G++P+++ N +I+
Sbjct: 473 FEYLQKSKMEPDIYTYNI---MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
F G EA +++ +KE G PD TY TL++A +R
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 77/216 (35%), Gaps = 35/216 (16%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI+ CK + M L M G ++ +YT LI A M+FK+M+
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P + YN + S + TY I+ + AG++E
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 200 DTW-----------------------------------STINEMKMKGFQPNSFVYSKIV 224
D W + +MK G P+S Y+ ++
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 225 GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ +G + E+++E+R + + D Y + D
Sbjct: 563 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 143/234 (61%), Gaps = 30/234 (12%)
Query: 249 SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN 308
S +YN+++ +Y + ++ +M+K R N + +I+ + G + KAL
Sbjct: 50 SYSVRLYNALVS---RYLRKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALG 106
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFG 368
+ +++E GL D +I+ ++I G+ G+ D E +
Sbjct: 107 IVEEIREIGLPMDVEIYNSVIDTFGKYGELD------EEL-------------------- 140
Query: 369 QYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
Q+G F++ E V LKS+GV S N+FC LANAYAQQGLC+Q +KVL++ME EGIEPN++
Sbjct: 141 QFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLI 200
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIRTKKFDEV 481
MLN+LINAF AG++MEA+S+YHHIKE+ + PD+VTY+TLMKAF R KK++ V
Sbjct: 201 MLNVLINAFGTAGKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKKYEMV 254
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 144/310 (46%), Gaps = 65/310 (20%)
Query: 97 MSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXX 156
MSLLA++ +LG + SY IE L ++ RT EAD LF E++ R +Y
Sbjct: 1 MSLLAEIHSLGSRPDPLSYVSFIETLASLRRTLEADALFHEVV------RFMIY------ 48
Query: 157 XXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPN 216
G + R Y L+ ++ R E +W +NEMK + F+ N
Sbjct: 49 --------------------GSYSVR-LYNALVSRYL---RKEVSWRVVNEMKKRKFRLN 84
Query: 217 SFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFV 276
SFVY KI+ +YRDNGMWKKA ++EEIRE + +D IYNS+IDTFGKYGEL E L+
Sbjct: 85 SFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQF-- 142
Query: 277 KMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQG 336
G + L ++ QG+ P +F T+ + +QG
Sbjct: 143 ------------------------GSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQG 178
Query: 337 KWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI-- 394
K + M + G + + VL++ FG GK A +K E V + P++
Sbjct: 179 LCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIK-ETVWIHPDVVT 237
Query: 395 FCALANAYAQ 404
+ L A+ +
Sbjct: 238 YSTLMKAFTR 247
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 211/460 (45%), Gaps = 7/460 (1%)
Query: 42 SSNLWIRNKVVNS---ESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMS 98
S NL+ N ++N S L + + G E S S L++ C + A++
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 99 LLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXX 158
L+ QM +G++ + ++T LI L + SEA L M+ G +P L Y +
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 159 XXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF 218
+M + I Y ++D +D + EM+ KG +PN
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM 278
YS ++ + W A+ +L ++ ERKI+ + +N++ID F K G+L EA KL+ +M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 279 QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
K + P+I T++SLI C +A ++F M + +P+ + T+I+ + +
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FC 396
D + F M+ RG Y L+ F Q NA+ + + S+GV PNI +
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV--HPNIMTYN 474
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
L + + G E+A+ V + ++ +EP I N++I AG+ + ++ +
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
GV PD++ Y T++ F R +E ++++M DG PD
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 207/465 (44%), Gaps = 45/465 (9%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEF-YSQLISKCCKEGNLDRAMSLLAQMEA 105
+RN + + + D LF RP L S F +++L+S K D +SL +M+
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRP---LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQR 113
Query: 106 LGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXX 165
LG + Y+Y LI + S A L +M+ G +P +
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI------------------ 155
Query: 166 XXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV- 224
T LL+ + R+ D + +++M G++P++ ++ ++
Sbjct: 156 -----------------VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 225 GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
GL+ N +A +++ + +R + Y +++ K G++ A L KM+ +
Sbjct: 199 GLFLHNKA-SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
N+V ++++I C+ ALNLF++M+ +G+ P+ + ++ISCL +W +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAY 402
M R + L+D F + GK AE+ + + P+IF +L N +
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS--IDPDIFTYSSLINGF 375
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
++A + ++M + PN+V N LIN F A R E + ++ + + G+ +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
VTYTTL+ F + + D +++K+M +DG P+ L D L
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 208/427 (48%), Gaps = 4/427 (0%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E + +S LI+ C EG + A+ L+ +M +G + + + L+ L G+ S+A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+L M+ G +P Y +M + I Y I++D
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
G L++ ++ NEM++KGF+ + +Y+ ++ + G W ++L ++ +RKI+ D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
++++ID F K G+L EA +L +M + G+ P+ VT+ SLI C+E KA ++
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
M +G P+ + F +I+ + D + F M+ RG Y L+ F + G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 372 KFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
K + A+E Q + S V P+I + L + G E+A+++ + +E +E +I +
Sbjct: 437 KLEVAKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
N++I+ NA + +A ++ + GV PD+ TY ++ + E +++++ME
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 490 TDGCTPD 496
DG +P+
Sbjct: 555 EDGHSPN 561
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 187/461 (40%), Gaps = 37/461 (8%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
+R+ +V+ + D LF RP L +S+L S + D + L QME
Sbjct: 44 LRSGIVDIKEDDAVDLFQEMTRSRPRPRLID--FSRLFSVVARTKQYDLVLDLCKQMELK 101
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G + Y+ + +I + S A ++I G +P ++
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
MV+ G T T L++ G++ D I+ M GFQPN Y
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG----- 216
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
++ K G+ A++L KM++ ++ +
Sbjct: 217 ------------------------------PVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
V ++ +I C++G A NLF++M+ +G D I+ T+I G+WD K
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
M R ++ L+D F + GK + AEE + + G+ + +L + + ++
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYT 466
++A +L +M +G PNI N+LIN + A + + ++ + GV D VTY
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
TL++ F K + +++ M + PD + ++L D L
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 166/369 (44%), Gaps = 4/369 (1%)
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
+L + YS +I CK+G+LD A +L +ME GF+ YT LI GR +
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
L ++MI + P + ++ EM+ GI TY L+D F
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
+L+ ++ M KG PN ++ ++ Y + E+ ++ R + DT
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
YN++I F + G+L A +LF +M VRP+IV++ L+ C G+ KAL +F +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
++ + D I+ II + K D F S+ +G K Y +++ + G
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 374 QNAEECVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
A+ + ++ +G SPN + L A+ +G ++ K+++ ++ G + +
Sbjct: 544 SEADLLFRKMEEDG--HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Query: 432 MLINAFSNA 440
M+++ S+
Sbjct: 602 MVVDMLSDG 610
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 204/427 (47%), Gaps = 4/427 (0%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E ++ +S LI+ C EG + A+ L+ +M +G + + L+ L G+ +EA
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+L +M+ G +P Y +M + I Y I++D
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
G L++ ++ NEM+MKG N Y+ ++G + + G W ++L ++ +RKI+ +
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
++ +ID+F K G+L EA +L +M G+ P+ +T+ SLI C+E KA +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
M +G P+ + F +I+ + + D + F M+ RG Y L+ F + G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 372 KFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
K A+E Q + S V PNI + L + G E+A+++ + +E +E +I +
Sbjct: 453 KLNVAKELFQEMVSRK--VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
N++I+ NA + +A ++ + GV P + TY ++ + E +++++ME
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 490 TDGCTPD 496
DG PD
Sbjct: 571 EDGHAPD 577
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 198/461 (42%), Gaps = 37/461 (8%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
+R+ +V+ ++D LF + RP + +S+L S K D ++L QME
Sbjct: 60 LRSGLVDIKADDAIDLFRDMIHSRPLPTVID--FSRLFSAIAKTKQYDLVLALCKQMELK 117
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G + Y+ + +I + A ++I G +P
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP--------------------- 156
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
T+ L++ GR+ + ++ M G +P+ + +V
Sbjct: 157 --------------NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 202
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
+G +A +++++ E + Y +++ K G+ A++L KM++ ++ +
Sbjct: 203 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
V ++ +I C+ G A NLF++M+ +G+ + + +I G+WD K
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
M R ++VL+D F + GK + AEE + + G+ + +L + + ++
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYT 466
++A +++ +M +G +PNI N+LIN + A R + + ++ + GV D VTY
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
TL++ F K + +++ M + P+ ++L D L
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 160/367 (43%)
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
+L + YS +I CK G+LD A +L +ME G + +Y LI N GR +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
L ++MI + P + +++ EM+ GI TY L+D F
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
L+ ++ M KG PN ++ ++ Y E+ ++ R + DT
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
YN++I F + G+L A +LF +M V PNIVT+ L+ C G+ KAL +F +
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
++ + D I+ II + K D F S+ +G K Y +++ + G
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
AE + ++ +G + L A+ G +++K+++ ++ G + + M+
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 434 INAFSNA 440
I+ S+
Sbjct: 620 IDMLSDG 626
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 198/418 (47%), Gaps = 4/418 (0%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S L++ C + A++L+ QM +G++ ++++T LI L + SEA L +M+
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +P L Y +M I Y ++D ++D
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ EM KG +P+ F YS ++ + G W A+ +L ++ ERKI+ + ++++ID
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F K G+L EA KL+ +M K + P+I T++SLI C +A ++F M + +P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + T+I + + + + F M+ RG Y L+ F Q NA+
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 381 QALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ + S GV PNI + L + + G +A+ V + ++ +EP+I N++I
Sbjct: 457 KQMVSVGV--HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
AG+ + ++ ++ GVSP+++ Y T++ F R +E + K+M+ DG P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 212/465 (45%), Gaps = 44/465 (9%)
Query: 47 IRNKVVNS-ESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEA 105
+RN++ + + D LF + RP + +++L+S K + +SL QM+
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE--FNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 106 LGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXX 165
LG Y+Y+ I + S A + +M+ G +P +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDI------------------ 153
Query: 166 XXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV- 224
T LL+ + + R+ D + +++M G++P++F ++ ++
Sbjct: 154 -----------------VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 225 GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
GL+ N +A +++++ +R D Y ++++ K G++ AL L KM+K +
Sbjct: 197 GLFLHNKA-SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
++V +N++I C+ ALNLF++M +G+ PD + ++ISCL G+W +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAY 402
M R ++ L+D F + GK AE+ + + P+IF +L N +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--IDPDIFTYSSLINGF 373
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
++A + ++M + PN+V + LI F A R E M ++ + + G+ +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
VTYTTL+ F + + D +++K+M + G P+ +L D L
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 161/361 (44%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I CK ++D A++L +M+ G + ++Y+ LI L N GR S+A L +MI
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P + ++ EM+ I TY L++ F RL+
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M K PN YS ++ + ++ E+ E+ +R + +T Y ++I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F + + A +F +M GV PNI+T+N L+ C+ G KA+ +F +Q +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + +I + + GK + + F +++ +G Y ++ F + G + A+
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
++ +K +G L + + L A + G E + ++++ M G + + ++ N +
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 620
Query: 440 A 440
Sbjct: 621 G 621
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 143/327 (43%), Gaps = 6/327 (1%)
Query: 176 SGIWR------TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRD 229
SG W + + EIL + +++D +M P+ ++K++
Sbjct: 36 SGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK 95
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
++ + E+++ IS D + Y+ I+ F + +L AL + KM K G P+IVT
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+SL+ +C + A+ L M E G PD F T+I L K + M
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
RG + Y +V+ + G A ++ ++ + I+ + + + +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
A+ + M+ +GI P++ + LI+ N GR+ +A + + E ++P++VT++ L+
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPD 496
AF++ K E +Y M PD
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPD 362
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 208/464 (44%), Gaps = 10/464 (2%)
Query: 57 DTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYT 116
D K+ L E G L + YS LI K N D A L+ +M + G + Y Y
Sbjct: 295 DAKSLLV---EMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 117 HLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS 176
I + G +A LF MI GL P+ Y EM
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
I + TY ++ S+G L+ ++ + EM G +PN +Y+ ++ + N + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
VL+E++E+ I+ D YNS+I K + EA V+M + G++PN T+ + I
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
+ ++ A +M+E G+ P+ + +I+ ++GK + SM +G
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKV 414
Y VL++ + K +AEE + ++ +G+ +P++F L N +++ G ++A +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI--APDVFSYGVLINGFSKLGNMQKASSI 649
Query: 415 LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
M EG+ PN+++ NML+ F +G +A + + G+ P+ VTY T++ + +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 475 TKKFDEVPIIYKRMETDGCTPDRKAKQMLQDA---LTALERRST 515
+ E ++ M+ G PD L D L +ER T
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 191/453 (42%), Gaps = 46/453 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI K +D A S L +M G + ++++Y I + AD KEM
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
CG+ P L MVD GI +TY +L++ +++
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D EM+ KG P+ F Y ++ + G +KA+ + +E+ E ++ + IYN ++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F + GE+ +A +L +M +G+ PN VT+ ++I +C+ GD +A LF +M+ +GL
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 320 PDPKIFVTI-------------ISCLGEQGK--------------W-----------DTI 341
PD ++ T+ I+ G K W + +
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 342 KKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANA 401
+ + R K Y +++D + G + A+E +++ ++ + + +L N
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Query: 402 YAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI-----KES 456
Y + G + V GIEP+ +M +++INAF G +A+ + + +
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
G + T L+ F K E+ + K ME
Sbjct: 910 GCKLSISTCRALLSGF---AKVGEMEVAEKVME 939
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 170/419 (40%), Gaps = 35/419 (8%)
Query: 92 NLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYN 151
N+D A+ L M G Y+Y LI+ L + R +A L EM G+ + Y+
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 152 IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK 211
+ EMV GI Y+ + G +E + + M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
G P + Y+ ++ Y ++ E+L E+++R I + + Y +++ G+L A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+ +M G RPN+V + +LIK + + A+ + +M+EQG+ PD + ++I
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
L + + D + M G K Y + + + +F +A++ V+ ++ GVL
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL-- 554
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH 451
PN V+ LIN + G+ +EA S Y
Sbjct: 555 ---------------------------------PNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 452 HIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTAL 510
+ + G+ D TYT LM + K D+ I++ M G PD + +L + + L
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 14/230 (6%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ CC+ +++RA+++ + G S+ + LI + G+T + ++
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 140 YCGL----KPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
KP YNI +M ++ + T TY LL+ +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER-------KI 248
GR + + +E G +P+ +YS I+ + GM KA +++++ + K+
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 249 SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHC 298
S+ T +++ F K GE+ A K+ M + P+ T LI C
Sbjct: 914 SISTC--RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 194/411 (47%), Gaps = 3/411 (0%)
Query: 86 KCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKP 145
+CCK A S+L ++ LG++ + ++ LI+ L G+ SEA +L M+ G +P
Sbjct: 135 RCCKTC---FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 146 RLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTI 205
+ YN +M + + TY ++D G ++ S
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 206 NEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKY 265
EM+ KG + + Y+ +V G W +L+++ R+I + +N ++D F K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 266 GELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIF 325
G+L EA +L+ +M G+ PNI+T+N+L+ +C + ++A N+ M PD F
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 326 VTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKS 385
++I + D K F +++ RG Y++LV F Q GK + AEE Q + S
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 386 EGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYME 445
GVL + L + G E+A+++ + ++ ++ IVM +I G+ +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 446 AMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
A +++ + GV P+++TYT ++ + E I+ ++ME DG P+
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 167/335 (49%), Gaps = 6/335 (1%)
Query: 176 SGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWK 234
+GI T I+++ F + +S + ++ G++P++ ++ ++ GL+ + G
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE-GKVS 175
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
+A +++ + E D YNSI++ + G+ AL L KM++ V+ ++ T++++I
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
CR+G A++LF +M+ +G+ + +++ L + GKW+ + M SR
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAI 412
+ VL+D+F + GK Q A E + + + G +SPNI + L + Y Q +A
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRG--ISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+L +M P+IV LI + R + M V+ +I + G+ + VTY+ L++ F
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
++ K +++ M + G PD +L D L
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 143/358 (39%), Gaps = 70/358 (19%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLI-------------------- 119
YS +I C++G +D A+SL +ME G + S +Y L+
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 120 --EALGNV-------------GRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXX 164
E + NV G+ EA+ L+KEMI G+ P + YN
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 165 XXXXXXXEM------------------------VDSGIWRTRE-----------TYEILL 189
M VD G+ R TY IL+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
F +G+++ EM G P+ Y ++ DNG +KA E+ E++++ K+
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
L +Y +II+ K G++ +A LF + +GV+PN++T+ +I C++G ++A L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
M+E G P+ + T+I G K E M S G + +++D+
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%)
Query: 277 KMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQG 336
+++ G+ NI T N +I CR A ++ + + G PD F T+I L +G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 337 KWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC 396
K + M G + Y +V+ + G A + ++ ++ V +
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
+ ++ + G + AI + + ME +GI+ ++V N L+ AG++ + + +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERRS 514
+ P+++T+ L+ F++ K E +YK M T G +P+ L D R S
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 202/458 (44%), Gaps = 3/458 (0%)
Query: 42 SSNLWIRNKVVNS---ESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMS 98
S NL+ N ++N S L + + G E S S L++ C + A++
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 101
Query: 99 LLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXX 158
L+ QM +G++ + ++T LI L + SEA L M+ G +P L Y +
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 159 XXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF 218
+M + I + ++D ++D + EM+ KG +PN
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM 278
YS ++ G W A+++L ++ E+KI+ + +N++ID F K G+ EA KL M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 279 QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
K + P+I T+NSLI C KA +F M + +PD + T+I + +
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
+ + F M+ RG Y L+ G NA++ + + S+GV + L
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
+ G E+A++V M+ I+ +I + +I AG+ + ++ + GV
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
P++VTY T++ + E + K+M+ DG PD
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 188/431 (43%), Gaps = 41/431 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+++L+S K D +SL +M+ LG + Y+Y LI + S A L +M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G +P + T LL+ + R+
Sbjct: 73 KLGYEPSI-----------------------------------VTLSSLLNGYCHGKRIS 97
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
D + +++M G++P++ ++ ++ GL+ N +A +++ + +R + Y +
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK-ASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
++ K G++ A L KM+ + ++V +N++I C+ ALNLF +M+ +G+
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + ++ISCL G+W + M + + L+D F + GKF AE+
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 379 CVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+ + P+IF +L N + ++A ++ + M + P++ N LI
Sbjct: 277 LHDDMIKRSI--DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
F + R + ++ + G+ D VTYTTL++ D ++K+M +DG PD
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 497 RKAKQMLQDAL 507
+L D L
Sbjct: 395 IMTYSILLDGL 405
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 166/395 (42%), Gaps = 35/395 (8%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +++ CK G++D A +LL +MEA + + +I++L +A LFKEM
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P + Y+ +M++ I T+ L+D FV G+
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++M + P+ F YNS+I
Sbjct: 273 EAEKLHDDMIKRSIDPDIFT-----------------------------------YNSLI 297
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ F + L +A ++F M + P++ T+N+LIK C+ LF +M +GL
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
D + T+I L G D +K F+ M S G Y++L+D GK + A E
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
++ + + I+ + + G + + + +G++PN+V N +I+ +
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
EA ++ +KE G PD TY TL++A +R
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
P+ F ++K++ + + E+++ IS + + YN +I+ F + ++ AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
KM K G P+IVT +SL+ +C + A+ L M E G PD F T+I L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
K + M RG + Y V+V+ + G A + +++ + I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
F + ++ + + A+ + + ME +GI PN+V + LI+ + GR+ +A + +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
E ++P+LVT+ L+ AF++ KF E ++ M PD
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 2/307 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LIS C G A LL+ M + ++ LI+A G+ EA+ L +MI
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P + YN MV + +TY L+ F + R+E
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
D EM +G ++ Y+ ++ GL+ D G A +V +++ + D Y+ +
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+D G+L +AL++F MQK ++ +I + ++I+ C+ G +LF + +G+
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + T+IS L + + M G Y L+ + G + E
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 379 CVQALKS 385
++ ++S
Sbjct: 522 LIREMRS 528
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 209/449 (46%), Gaps = 11/449 (2%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E + ++ L++ C E + A+ L+ +M +G + + + L+ L G+ S+A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+L M+ G +P Y +M + I Y I++D
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
G L++ ++ NEM++KGF+ + Y+ ++G + + G W ++L ++ +RKIS +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
++ +ID+F K G+L EA +L +M + G+ PN +T+NSLI C+E +A+ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
M +G PD F +I+ + + D + F M+ RG Y LV F Q G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 372 KFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
K + A++ Q + S V P+I + L + G E+A+++ +E +E +I +
Sbjct: 453 KLEVAKKLFQEMVSRR--VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
++I+ NA + +A ++ + GV D Y ++ R + I++++M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 490 TDGCTPDRKAKQML-------QDALTALE 511
+G PD +L DA TA E
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAE 599
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 126/282 (44%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
P ++++ ++ + +++ + I+ + + +I+ F + +L A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
K+ K G P+ V +N+L+ C E ++AL L M E G P T+++ L
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
GK + M G + Y ++++ + G+ A E ++ ++ + +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
+ + + + G + A + ME +G + +I+ N LI F NAGR+ + + +
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ +SP++VT++ L+ +F++ K E + K M G P+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 87/202 (43%)
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
A++LF DM + P F + S + + +++ + + M S+G +++++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 366 IFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEP 425
F + K A + + G IF L N + +A++++ M G +P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 426 NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
++ LN L+N G+ +A+ + + E+G P+ VTY ++ ++ + +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 486 KRMETDGCTPDRKAKQMLQDAL 507
++ME D ++ D L
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGL 273
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 202/424 (47%), Gaps = 7/424 (1%)
Query: 93 LDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRT-SEADMLFKEMIYCGLKPRLNLYN 151
+D+A+S++ +A GF SY +++A R S A+ +FKEM+ + P + YN
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 152 IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK 211
I +M G TY L+D + +++D + + M +K
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 212 GFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE 270
G +PN Y+ ++ GL R+ G K+ + VL E+ R SLD YN++I + K G +
Sbjct: 270 GLEPNLISYNVVINGLCRE-GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
AL + +M + G+ P+++T+ SLI C+ G+ +A+ M+ +GL P+ + + T++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
++G + + M G Y L++ GK ++A ++ +K +G +
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG--L 446
Query: 391 SPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
SP++ + + + + + ++A++V + M +GI+P+ + + LI F R EA
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+Y + G+ PD TYT L+ A+ ++ ++ M G PD +L + L
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 509 ALER 512
R
Sbjct: 567 KQSR 570
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 174/391 (44%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI C GN+D A++L +ME G + +Y LI+ + + + L + M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
GL+P L YN+ EM G TY L+ + G
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
EM G P+ Y+ ++ G +A E L+++R R + + Y +++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D F + G + EA ++ +M G P++VT+N+LI HC G A+ + DM+E+GL
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T++S D + M +G K Y+ L+ F + + + A +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ + G+ + AL NAY +G E+A+++ M +G+ P++V ++LIN +
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
R EA + + P VTY TL++
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 189/474 (39%), Gaps = 17/474 (3%)
Query: 34 SKIPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNL 93
S++ ++ + N+ IR D TLF E + + Y+ LI CK +
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT--YNTLIDGYCKLRKI 256
Query: 94 DRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIX 153
D LL M G + + SY +I L GR E + EM G YN
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 154 XXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGF 213
EM+ G+ + TY L+ AG + +++M+++G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 214 QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALK 273
PN Y+ +V + G +A VL E+ + S YN++I+ G++ +A+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 274 LFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLG 333
+ M+++G+ P++V++++++ CR D +AL + +M E+G+ PD + ++I
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 334 EQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN 393
EQ + +E M G Y L++ + G + A + + +GVL
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 394 IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN-------------- 439
+ L N +Q +A ++L + E P+ V + LI SN
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 440 -AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
G EA V+ + PD Y ++ R + +YK M G
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 148/424 (34%), Gaps = 87/424 (20%)
Query: 55 ESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYS 114
E + L + E R G S Y+ LI CK GN++RAM L QM G + +
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 115 YTHLIEALGNVGRTSEADMLFKEMI-----------------YC---------------- 141
YT L++ G +EA + +EM +C
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 142 --GLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
GL P + Y+ EMV+ GI TY L+ F R +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ EM G P+ F Y+ ++ Y G +KA ++ E+ E+ + D Y+ +I
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK------------------------ 295
+ K EA +L +K+ E P+ VT+++LI+
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 296 --------------------------WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTII 329
HCR GD KA L+ +M + G + ++
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 330 SCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
L ++GK + + + VLV+I + G + + + +G L
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFL 742
Query: 390 VSPN 393
PN
Sbjct: 743 --PN 744
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 204/446 (45%), Gaps = 13/446 (2%)
Query: 57 DTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYT 116
D LF + RP + +S+L+S K D +SL QM+ LG + Y+Y+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVE--FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 117 HLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS 176
I + S A + +M+ G P + N +MV+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK- 235
G T+ L+ + + + + M +KG QP+ Y ++ NG+ K+
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI-----NGLCKRG 229
Query: 236 ----ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
A +L ++ + KI D IYN+IID KY + +A LF KM+ +G++P++ T+N
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
LI C G ++ A L SDM E+ + PD F +I ++GK +K ++ M
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 352 GNKKYGAV-YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
+ V Y L+ F +Y + + E + + G++ + + L + + Q C+
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
A V + M +G+ P+I+ N+L++ N G A+ V+ ++++ + D+VTYTT+++
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPD 496
A + K ++ ++ + G P+
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPN 495
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 185/395 (46%), Gaps = 1/395 (0%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ L++ C + A++L+ QM +G+Q + ++T L+ L + SEA L + M+
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +P L Y +M I Y ++D ++D
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ N+M+ KG +P+ F Y+ ++ + G W A+ +L ++ E+ I+ D +N++ID
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 261 TFGKYGELGEALKLFVKMQK-EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K G+L EA KL+ +M K + P++V +N+LIK C+ + + +F +M ++GL
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
+ + T+I + D + F+ M S G Y +L+D G + A
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ ++ + + + + A + G E + + +G++PN+V +++ F
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
G EA +++ +KE G P+ TY TL++A +R
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 164/337 (48%), Gaps = 1/337 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+M + GI TY I ++YF +L + + +M G+ P+ + ++ +
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+A +++++ E DT + +++ ++ + EA+ L +M +G +P++VT+
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
++I C+ G+ ALNL + M++ + D I+ TII L + D F M ++
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G K Y L+ YG++ +A + + + + F AL +A+ ++G +A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 412 IKVL-QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
K+ ++++ + P++V N LI F R E M V+ + + G+ + VTYTTL+
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
F + + D +++K+M +DG PD +L D L
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 1/317 (0%)
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
+L+D +M P+ +SK++ + + E+++ IS + + Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
I+ F + +L AL + KM K G P+IVT NSL+ C ++A+ L M E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
G PD F T++ L + K E M +G + Y +++ + G+ A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+ ++ + I+ + + + + A + ME +GI+P++ N LI+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM-ETDGCTP 495
N GR+ +A + + E ++PDLV + L+ AF++ K E +Y M ++ C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 496 DRKAKQMLQDALTALER 512
D A L +R
Sbjct: 355 DVVAYNTLIKGFCKYKR 371
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 158/362 (43%), Gaps = 1/362 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +I+ CK G D A++LL +ME + Y +I+ L +A LF +M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+KP + YN +M++ I + L+D FV G+L
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 200 DTWSTINEM-KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ +EM K K P+ Y+ ++ + ++ EV E+ +R + +T Y ++
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I F + + A +F +M +GV P+I+T+N L+ C G+ AL +F MQ++ +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
D + T+I L + GK + F S++ +G K Y ++ F + G + A+
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+K +G L + + L A + G + ++++ M G + ++ N
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLH 577
Query: 439 NA 440
+
Sbjct: 578 DG 579
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 127/342 (37%), Gaps = 75/342 (21%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I CK ++D A L +ME G + ++Y LI L N GR S+A L +M+
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSG-IWRTRETYEILLDYFVSAGRL 198
+ P L +N EMV S + Y L+ F R+
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIV----------------------GLYRD------- 229
E+ EM +G N+ Y+ ++ G++ D
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 230 ------NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
NG + A V E +++R + LD Y ++I+ K G++ + LF + +GV
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 284 RPNIVTW-----------------------------------NSLIKWHCREGDYTKALN 308
+PN+VT+ N+LI+ R+GD +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
L +M+ G D F + + L G+ D K F M S
Sbjct: 553 LIKEMRSCGFAGDASTFGLVTNML-HDGRLD---KSFLDMLS 590
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 191/425 (44%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E S S L++ C + A++L+ QM +G++ + ++T LI L + SEA
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
L M+ G +P L Y + +M + I + ++D
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
++D + EM+ KG +PN YS ++ G W A+++L ++ E+KI+ +
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+N++ID F K G+ EA KL+ M K + P+I T+NSL+ C KA +F
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
M + +PD + T+I + + + + F M+ RG Y L+ G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
NA++ + + S+GV + L + G E+A++V M+ I+ +I +
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
+I AG+ + ++ + GV P++VTY T++ + E + K+M+ D
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 492 GCTPD 496
G P+
Sbjct: 570 GPLPN 574
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 199/464 (42%), Gaps = 43/464 (9%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
+RN + + + D LF RP + +++L+S K D +SL +M+ L
Sbjct: 57 LRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE--FNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
Y+Y LI + S A L +M+ G +P +
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI------------------- 155
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-G 225
T LL+ + R+ D + +++M G++P++ ++ ++ G
Sbjct: 156 ----------------VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 226 LYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRP 285
L+ N +A +++ + +R + Y +++ K G+ AL L KM+ +
Sbjct: 200 LFLHNK-ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 286 NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF 345
++V +N++I C+ ALNLF +M+ +G+ P+ + ++ISCL G+W +
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYA 403
M + + L+D F + GKF AE+ + + P+IF +L N +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS--IDPDIFTYNSLVNGFC 376
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
++A ++ + M + P++V N LI F + R + ++ + G+ D V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
TYTTL++ D ++K+M +DG PD +L D L
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 170/395 (43%), Gaps = 35/395 (8%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +++ CK G+ D A++LL +MEA + + +I++L +A LFKEM
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P + Y+ +M++ I T+ L+D FV G+
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++M + P+ F Y+ +V + + KA ++ E + + D YN++I
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K + + +LF +M G+ + VT+ +LI+ +GD A +F M G+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + ++ L GK + + F+ M K +Y +++ + GK + +
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD- 526
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+FC+L+ +G++PN+V N +I+ +
Sbjct: 527 --------------LFCSLSL--------------------KGVKPNVVTYNTMISGLCS 552
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
EA ++ +KE G P+ TY TL++A +R
Sbjct: 553 KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 2/307 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LIS C G A LL+ M + ++ LI+A G+ EA+ L+ +MI
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P + YN MV + TY L+ F + R+E
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
D EM +G ++ Y+ ++ GL+ D G A +V +++ + D Y+ +
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+D G+L +AL++F MQK ++ +I + ++I+ C+ G +LF + +G+
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + T+IS L + + M G Y L+ + G + E
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 379 CVQALKS 385
++ ++S
Sbjct: 597 LIREMRS 603
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 195/423 (46%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
K +D + + +M G +++ YS T ++E L G ++ L KE G+KP
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
YN M G+ + TY +L++ V G++ D +EM
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+ +G + + VY+ ++ G K+A + +E+ E+ +S ++ Y ++ID K GE+
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
G A L +MQ +GV V +N+LI +CR+G +A ++ M+++G D TI
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
SC ++D K+ M G K Y L+D++ + G + A+ + S+GV
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + + AY +QG ++A K+ ME G++P+ LI+ A EAM
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
++ + G+ + VTYT ++ + K DE +Y M+ G T D K L ++
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Query: 509 ALE 511
+ E
Sbjct: 621 SPE 623
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 39/334 (11%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E G E Y+ LIS C++GN+ RA L ++ G SSY+Y LI+ + VG
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
A++L EM G+ T+ +
Sbjct: 379 EMGAAEILMN-----------------------------------EMQSKGVNITQVVFN 403
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
L+D + G +++ + M+ KGFQ + F + I + + +A + L + E
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ L T Y ++ID + K G + EA +LFV+M +GV+PN +T+N +I +C++G +A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 307 LNLFSDMQEQGLYPDPKIFVTII--SCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
L ++M+ G+ PD + ++I C+ + D + F M +G + Y V++
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADN--VDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
+ GK A +K +G + ++ AL
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 143/341 (41%), Gaps = 70/341 (20%)
Query: 226 LYRDNGMWKKATEVLEEI--------------------RERKISLDTHIYNSIIDT---- 261
+Y DNGM+++ V + + + R+I L I+ ++D+
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKI 222
Query: 262 -----------FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY------- 303
+ GE+ ++ KL + +G++P T+N++I + ++ D+
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 304 ----------------------------TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
+ A LF +M+E+G+ D ++ ++IS +
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
G F+ +T +G Y L+D + G+ AE + ++S+GV ++ +F
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
L + Y ++G+ ++A + +ME +G + ++ N + + F+ RY EA + E
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
GV V+YT L+ + + +E ++ M + G P+
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E G SS Y LI CK G + A L+ +M++ G ++ + LI+ G
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
EA M++ M G + + N M++ G+ + +Y
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYT 473
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
L+D + G +E+ EM KG QPN+ Y+ ++ Y G K+A ++ +
Sbjct: 474 NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ D++ Y S+I + EA++LF +M +G+ N VT+ +I + G +A
Sbjct: 534 GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCL 332
L+ +M+ +G D K++ +I +
Sbjct: 594 FGLYDEMKRKGYTIDNKVYTALIGSM 619
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 196/427 (45%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS +++ C+ G LD+ L+ M+ G + +SY Y +I L + + +EA+ F EMI
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P +Y EM I TY ++ F G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +EM KG +P+S +++++ Y G K A V + + S + Y ++I
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K G+L A +L +M K G++PNI T+NS++ C+ G+ +A+ L + + GL
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
D + T++ + G+ D ++ + M +G + + VL++ F +G ++ E+
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ + ++G+ + F +L Y + + A + + M G+ P+ L+
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
A EA ++ +K G S + TY+ L+K F++ KKF E ++ +M +G D++
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 500 KQMLQDA 506
D
Sbjct: 704 FDFFSDT 710
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 192/454 (42%), Gaps = 1/454 (0%)
Query: 39 SLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMS 98
S++S N+++ ++ T T + E P G + Y+ +I C+ G + A
Sbjct: 209 SVDSCNVYL-TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267
Query: 99 LLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXX 158
LL ME G+ SY+ ++ G + L + M GLKP +Y
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 159 XXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF 218
EM+ GI Y L+D F G + EM + P+
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM 278
Y+ I+ + G +A ++ E+ + + D+ + +I+ + K G + +A ++ M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 279 QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
+ G PN+VT+ +LI C+EGD A L +M + GL P+ + +I++ L + G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
+ K + G Y L+D + + G+ A+E ++ + +G+ + F L
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
N + G+ E K+L M +GI PN N L+ + A ++Y + GV
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
PD TY L+K + + E +++ M+ G
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 178/381 (46%), Gaps = 5/381 (1%)
Query: 118 LIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXX-XXXXXXXXXXXEMVDS 176
+ L + G EA +F++M+ GL ++ N+ E +
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV 240
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
G+ +Y I++ + GR+++ + M++KG+ P+ YS +V Y G K
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
+++E ++ + + +++IY SII + +L EA + F +M ++G+ P+ V + +LI
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
C+ GD A F +M + + PD + IIS + G K F M +G +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKV 414
+ L++ + + G ++A + G SPN+ + L + ++G + A ++
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGC--SPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 415 LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
L M G++PNI N ++N +G EA+ + + +G++ D VTYTTLM A+ +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 475 TKKFDEVPIIYKRMETDGCTP 495
+ + D+ I K M G P
Sbjct: 539 SGEMDKAQEILKEMLGKGLQP 559
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 2/266 (0%)
Query: 233 WKKATE--VLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
+K AT V E E + + YN +I + G + EA L + M+ +G P+++++
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
++++ +CR G+ K L M+ +GL P+ I+ +II L K ++ F M
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
+G VY L+D F + G + A + + S + + A+ + + Q G +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
A K+ M +G+EP+ V LIN + AG +A V++H+ ++G SP++VTYTTL+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPD 496
+ D + M G P+
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 137/324 (42%), Gaps = 35/324 (10%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E S +++LI+ CK G++ A + M G + +YT LI+ L G A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ L EM GL+P + YN +++
Sbjct: 476 NELLHEMWKIGLQPNIFTYN-----------------------------------SIVNG 500
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+G +E+ + E + G ++ Y+ ++ Y +G KA E+L+E+ + +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+N +++ F +G L + KL M +G+ PN T+NSL+K +C + A ++
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
DM +G+ PD K + ++ + F+ M +G + Y+VL+ F +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 372 KFQNAEECVQALKSEGVLVSPNIF 395
KF A E ++ EG+ IF
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIF 704
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 1/290 (0%)
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG-ELGEALKLFVK 277
V+ + D G+ ++A V E++ + L N + K + A+ +F +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
+ GV N+ ++N +I + C+ G +A +L M+ +G PD + T+++ G+
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
D + K E M +G K +Y ++ + + K AEE + +G+L ++
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
L + + ++G A K M I P+++ +I+ F G +EA ++H + G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 458 VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ PD VT+T L+ + + + ++ M GC+P+ L D L
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 196/427 (45%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS +++ C+ G LD+ L+ M+ G + +SY Y +I L + + +EA+ F EMI
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P +Y EM I TY ++ F G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +EM KG +P+S +++++ Y G K A V + + S + Y ++I
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K G+L A +L +M K G++PNI T+NS++ C+ G+ +A+ L + + GL
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
D + T++ + G+ D ++ + M +G + + VL++ F +G ++ E+
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ + ++G+ + F +L Y + + A + + M G+ P+ L+
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
A EA ++ +K G S + TY+ L+K F++ KKF E ++ +M +G D++
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 500 KQMLQDA 506
D
Sbjct: 704 FDFFSDT 710
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 192/454 (42%), Gaps = 1/454 (0%)
Query: 39 SLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMS 98
S++S N+++ ++ T T + E P G + Y+ +I C+ G + A
Sbjct: 209 SVDSCNVYL-TRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267
Query: 99 LLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXX 158
LL ME G+ SY+ ++ G + L + M GLKP +Y
Sbjct: 268 LLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC 327
Query: 159 XXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF 218
EM+ GI Y L+D F G + EM + P+
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM 278
Y+ I+ + G +A ++ E+ + + D+ + +I+ + K G + +A ++ M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 279 QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
+ G PN+VT+ +LI C+EGD A L +M + GL P+ + +I++ L + G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
+ K + G Y L+D + + G+ A+E ++ + +G+ + F L
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
N + G+ E K+L M +GI PN N L+ + A ++Y + GV
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
PD TY L+K + + E +++ M+ G
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 178/381 (46%), Gaps = 5/381 (1%)
Query: 118 LIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXX-XXXXXXXXXXXEMVDS 176
+ L + G EA +F++M+ GL ++ N+ E +
Sbjct: 181 FFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEV 240
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
G+ +Y I++ + GR+++ + M++KG+ P+ YS +V Y G K
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
+++E ++ + + +++IY SII + +L EA + F +M ++G+ P+ V + +LI
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
C+ GD A F +M + + PD + IIS + G K F M +G +
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKV 414
+ L++ + + G ++A + G SPN+ + L + ++G + A ++
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGC--SPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 415 LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
L M G++PNI N ++N +G EA+ + + +G++ D VTYTTLM A+ +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 475 TKKFDEVPIIYKRMETDGCTP 495
+ + D+ I K M G P
Sbjct: 539 SGEMDKAQEILKEMLGKGLQP 559
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 2/266 (0%)
Query: 233 WKKATE--VLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
+K AT V E E + + YN +I + G + EA L + M+ +G P+++++
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
++++ +CR G+ K L M+ +GL P+ I+ +II L K ++ F M
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
+G VY L+D F + G + A + + S + + A+ + + Q G +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
A K+ M +G+EP+ V LIN + AG +A V++H+ ++G SP++VTYTTL+
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPD 496
+ D + M G P+
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 137/324 (42%), Gaps = 35/324 (10%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E S +++LI+ CK G++ A + M G + +YT LI+ L G A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ L EM GL+P + YN +++
Sbjct: 476 NELLHEMWKIGLQPNIFTYN-----------------------------------SIVNG 500
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+G +E+ + E + G ++ Y+ ++ Y +G KA E+L+E+ + +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+N +++ F +G L + KL M +G+ PN T+NSL+K +C + A ++
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
DM +G+ PD K + ++ + F+ M +G + Y+VL+ F +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 372 KFQNAEECVQALKSEGVLVSPNIF 395
KF A E ++ EG+ IF
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIF 704
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 1/290 (0%)
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG-ELGEALKLFVK 277
V+ + D G+ ++A V E++ + L N + K + A+ +F +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
+ GV N+ ++N +I + C+ G +A +L M+ +G PD + T+++ G+
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
D + K E M +G K +Y ++ + + K AEE + +G+L ++
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
L + + ++G A K M I P+++ +I+ F G +EA ++H + G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 458 VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ PD VT+T L+ + + + ++ M GC+P+ L D L
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 195/418 (46%), Gaps = 4/418 (0%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S L++ C + A++L+ QM + +Q ++ ++ LI L + SEA L M+
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +P L Y +M I Y ++D + + D
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ EM KG +PN Y+ ++ + G W A+ +L ++ ERKI+ + ++++ID
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F K G+L EA KL+ +M K + P+I T++SLI C +A ++F M + +P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + T+I + + + + F M+ RG Y L+ Q G A++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 381 QALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ + S+GV P+I + L + + G E+A+ V + ++ +EP+I N++I
Sbjct: 454 KKMVSDGV--PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
AG+ + ++ + GV P+++ YTT++ F R +E +++ M+ DG P+
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 196/431 (45%), Gaps = 41/431 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +++ CK G++D A+SLL +ME + YT +I+AL N ++A LF EM
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P + TY L+ + GR
Sbjct: 283 NKGIRPNV-----------------------------------VTYNSLIRCLCNYGRWS 307
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D +++M + PN +S ++ + G +A ++ +E+ +R I D Y+S+I
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ F + L EA +F M + PN+VT+N+LIK C+ + + LF +M ++GL
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE-- 377
+ + T+I L + G D +K F+ M S G Y++L+D +YGK + A
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 378 -ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
E +Q K E + + NI + + G E + + +G++PN+++ +I+
Sbjct: 488 FEYLQKSKMEPDIYTYNI---MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
F G EA +++ +KE G P+ TY TL++A +R + K M + G D
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604
Query: 497 RKAKQMLQDAL 507
M+ + L
Sbjct: 605 ASTISMVINML 615
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 200/463 (43%), Gaps = 43/463 (9%)
Query: 48 RNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALG 107
RN +++ + D LF RP + +++L+S K D +SL +M+ L
Sbjct: 53 RNVLLDLKLDDAVDLFGEMVQSRPLPSIVE--FNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 108 FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXX 167
YSY LI + A + +M+ G +P +
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDI-------------------- 150
Query: 168 XXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GL 226
T LL+ + R+ + + +++M + +QPN+ ++ ++ GL
Sbjct: 151 ---------------VTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
+ N +A +++ + R D Y ++++ K G++ AL L KM+K + +
Sbjct: 196 FLHNK-ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
+V + ++I C + ALNLF++M +G+ P+ + ++I CL G+W +
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQ 404
M R ++ L+D F + GK AE+ + + P+IF +L N +
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--IDPDIFTYSSLINGFCM 372
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
++A + ++M + PN+V N LI F A R E M ++ + + G+ + VT
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
Y TL++ + D I+K+M +DG PD +L D L
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 202/455 (44%), Gaps = 39/455 (8%)
Query: 90 EGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNL 149
+G L +A L +M GF L++YSY LI L +EA +++ MI G +P L
Sbjct: 166 KGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT 225
Query: 150 YNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMK 209
Y+ EM G+ T+ I + AG++ + + + M
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 210 MKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELG 269
+G P+ Y+ ++ A EV E+++ + D Y +++D F +L
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 270 EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTII 329
+ + +M+K+G P++VT+ L+ C+ G++ +A + M++QG+ P+ + T+I
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 330 SCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
L + D + F +M S G K Y V +D +G+ G +A E + +K++G+
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI- 464
Query: 390 VSPNIFC------ALANA-------------------------------YAQQGLCEQAI 412
+PNI +LA A Y++ G ++AI
Sbjct: 465 -APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
K+L M G EP+++++N LIN A R EA ++ +KE + P +VTY TL+
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ K E +++ M GC P+ L D L
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 190/478 (39%), Gaps = 75/478 (15%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E RP S + YS L+ K ++D M LL +ME LG + + Y++T I LG G
Sbjct: 217 EGFRP----SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ +EA + K M G P + Y + +M R TY
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
LLD F L+ +EM+ G P+ ++ +V G + +A + L+ +R++
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Query: 247 KISLDTHIYNSII-----------------------------------DTFGKYGELGEA 271
I + H YN++I D +GK G+ A
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 272 LKLFVKMQKEGVRPNI-----------------------------------VTWNSLIKW 296
L+ F KM+ +G+ PNI VT+N ++K
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
+ + G+ +A+ L S+M E G PD + ++I+ L + + D K F M K
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
Y L+ G+ GK Q A E + + +G + F L + + A+K+L
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
M G P++ N +I G+ EAM +H +K+ V PD VT TL+ ++
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVK 689
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 187/457 (40%), Gaps = 49/457 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI + LD A+ L ME+LG + ++Y+Y I+ G G + A F++M
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P + N + D G+ TY +++ + G ++
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++EM G +P+ V + ++ +A ++ ++E K+ YN+++
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
GK G++ EA++LF M ++G PN +T+N+L C+ + T AL + M + G
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY--------GAVYAVLV------- 364
PD + TII L + G+ F M + G V A L+
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 365 -----------------DIFGQY---GKFQNAEECVQALKSEGV------LVSPNI--FC 396
D+ G NA + L + G+ ++ P I C
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
N + L E+ K L G++P + N+LI A A V+ +K +
Sbjct: 761 KHNNVSGARTLFEKFTKDL------GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
G PD+ TY L+ A+ ++ K DE+ +YK M T C
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC 851
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 178/434 (41%), Gaps = 41/434 (9%)
Query: 117 HLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS 176
+++EAL G+ E +F M +K N Y +M +
Sbjct: 123 YMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREF 182
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKI-VGLYRDNGMWKK 235
G +Y L+ + + + M ++GF+P+ YS + VGL + +
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI-DS 241
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
+L+E+ + + + + I G+ G++ EA ++ +M EG P++VT+ LI
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
C A +F M+ PD ++T++ + D++K+ + M G+
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN------IFCAL----------- 398
+ +LVD + G F A + + ++ +G+L PN + C L
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL--PNLHTYNTLICGLLRVHRLDDALE 419
Query: 399 --------------------ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ Y + G A++ + M+ +GI PNIV N + + +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
AGR EA +++ +K+ G+ PD VTY +MK + + + DE + M +GC PD
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 499 AKQMLQDALTALER 512
L + L +R
Sbjct: 540 VVNSLINTLYKADR 553
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 162/391 (41%), Gaps = 42/391 (10%)
Query: 83 LISKCCKEGNLDRAMSLLAQM-EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYC 141
+I CK N+ A +L + + LG Q +Y LI L A +F ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 142 GLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDT 201
G P + YN EM T+ I++ V AG ++D
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 202 WSTINE-MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ M + F P + Y ++ +G +A ++ E + + + IYN +I+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
FGK GE A LF +M KEGVRP++ T++ L+ C G + L+ F +++E GL P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESM-TSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
D + II+ LG+ + + F M TSRG
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG--------------------------- 1027
Query: 380 VQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
++P+++ +L G+ E+A K+ ++ G+EPN+ N LI +
Sbjct: 1028 ----------ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
S +G+ A +VY + G SP+ TY L
Sbjct: 1078 SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 150/335 (44%), Gaps = 6/335 (1%)
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
D G+ TY +L+ + A +E ++K G P+ Y+ ++ Y +G
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVK-MQKEGVRPNIVTWNSL 293
+ E+ +E+ + +T +N +I K G + +AL L+ M P T+ L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 294 IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN 353
I + G +A LF M + G P+ I+ +I+ G+ G+ D F+ M G
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 354 KKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQA 411
+ Y+VLVD G+ + LK G+ +P++ C + N + E+A
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL--NPDVVCYNLIINGLGKSHRLEEA 1015
Query: 412 IKVLQIME-GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
+ + M+ GI P++ N LI AG EA +Y+ I+ +G+ P++ T+ L++
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
+ + K + +Y+ M T G +P+ + L +
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/441 (20%), Positives = 177/441 (40%), Gaps = 15/441 (3%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ LI+ K +D A + +M+ + + + +Y L+ LG G+ EA LF+ M+
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G P +N +M+D G TY ++ V G++++
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDN---GMWKKATEVLEEIRERKISLDTHIYNS 257
++MK + + + + G+ + + +K T L ++ +L +
Sbjct: 662 AMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL---FWED 718
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGV-RPNIVTWNSLIKWHCREGDYTKALNLFSDM-QE 315
+I + + A+ ++ G+ R +I++ C+ + + A LF ++
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
G+ P + +I L E + + F + S G A Y L+D +G+ GK
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 376 AEECVQALKS---EGVLVSPNIFCALANAYAQQGLCEQAIKVL-QIMEGEGIEPNIVMLN 431
E + + + E ++ NI + + + G + A+ + +M P
Sbjct: 839 LFELYKEMSTHECEANTITHNI---VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
LI+ S +GR EA ++ + + G P+ Y L+ F + + D ++KRM +
Sbjct: 896 PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 492 GCTPDRKAKQMLQDALTALER 512
G PD K +L D L + R
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGR 976
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y LI K G L A L M G + + Y LI G G A LFK M+
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P L +TY +L+D GR++
Sbjct: 954 KEGVRPDL-----------------------------------KTYSVLVDCLCMVGRVD 978
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR-ERKISLDTHIYNSI 258
+ E+K G P+ Y+ I+ + ++A + E++ R I+ D + YNS+
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I G G + EA K++ ++Q+ G+ PN+ T+N+LI+ + G A ++ M G
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 319 YPD 321
P+
Sbjct: 1099 SPN 1101
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 36/215 (16%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI+ K G D A +L +M G + +Y+ L++ L VGR E FKE+
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
GL P + YN ++ +G+ ++ RLE
Sbjct: 989 ESGLNPDVVCYN---------------------LIINGLGKSH--------------RLE 1013
Query: 200 DTWSTINEMKM-KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ NEMK +G P+ + Y+ ++ GM ++A ++ EI+ + + +N++
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
I + G+ A ++ M G PN T+ L
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 208/464 (44%), Gaps = 43/464 (9%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
+R + + E D LF RP + +S+L+S K D +S +ME L
Sbjct: 50 LRTGLSDIELDDAIGLFGVMAQSRPFPSIIE--FSKLLSAIAKMNKFDLVISFGEKMEIL 107
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G + Y+Y LI R S A L +M+ G +P +
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDI------------------- 148
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-G 225
T LL+ F R+ D + +++M G++P++ ++ ++ G
Sbjct: 149 ----------------VTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Query: 226 LYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRP 285
L+ N +A +++ + +R D Y ++++ K G+ AL L KM+ +
Sbjct: 193 LFLHNK-ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251
Query: 286 NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF 345
N+V ++++I C+ ALNLF++M+ +G+ P+ + ++ISCL G+W +
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYA 403
M R ++ L+D F + GK AE+ + + + PNIF +L N +
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS--IDPNIFTYSSLINGFC 369
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+A ++L++M + PN+V N LIN F A R + M ++ + + G+ + V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
TYTTL+ F + + D +++K+M + G P+ +L D L
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 172/397 (43%), Gaps = 35/397 (8%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ L++ C + A++L+ QM +G++ + ++T LI L + SEA L M+
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +P L Y +M + I Y ++D +D
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ EM+ KG +PN YS ++ + G W A+ +L ++ ERKI+ + ++++ID
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F K G+L +A KL+ +M K + PNI T++SLI C +A + M + P
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + T+I+ + + D + F M+ RG Y L+ +G FQ +
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI-----HGFFQARD--- 443
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
C+ A V + M G+ PNI+ N+L++
Sbjct: 444 ---------------------------CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
G+ +AM V+ +++ S + PD+ TY +++ + K
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 144/333 (43%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
+T Y +L +S L+D M P+ +SK++ +
Sbjct: 41 KTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISF 100
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
E++ IS + + YN +I+ F + L AL L KM K G P+IVT NSL+ C
Sbjct: 101 GEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCH 160
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
+ A+ L M E G PD F T+I L K + M RG +
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
Y +V+ + G A + +++ + + I+ + ++ + + A+ + ME
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
+G+ PN++ + LI+ N GR+ +A + + E ++P+LVT++ L+ AF++ K
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 480 EVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+ +Y+ M P+ L + L+R
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 197/425 (46%), Gaps = 5/425 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI+ KEG D A+S L +ME Y++LIE + S+A +F +
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P L YN EM ++G+ +Y LL +V +
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ S EMK + + ++ +Y M K+A + +R+ I + YN+I+
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+G+ GEA+ LF MQ++ + N+VT+N++IK + + ++ KA NL +MQ +G+
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + TIIS G+ GK D F+ + S G + +Y ++ + + G +A+
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 492
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ LK + LA A G E+A V + G +I + +IN +S
Sbjct: 493 LHELKLPDNIPRETAITILAKA----GRTEEATWVFRQAFESGEVKDISVFGCMINLYSR 548
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCT-PDRK 498
RY+ + V+ ++ +G PD ++ A+ + ++F++ +Y+ M+ +GC PD
Sbjct: 549 NQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEV 608
Query: 499 AKQML 503
QML
Sbjct: 609 HFQML 613
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 144/284 (50%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
+ P+ F Y+ ++ + A + +E+R+R ++ D + Y+++I +FGK G AL
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 273 KLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
KM+++ V ++V +++LI+ R DY+KA+++FS ++ G+ PD + ++I+
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
G+ + + + M G Y+ L+ ++ + KF A +K +
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
+ + Y Q + ++A ++ + IEPN+V N ++ + A + EA+ ++
Sbjct: 331 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 390
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
++ + ++VTY T++K + +T + ++ + + M++ G P+
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 434
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 178/455 (39%), Gaps = 45/455 (9%)
Query: 6 VFCSNQISLSRNHGGALRCSSHATAIQ-FSKIPNSLNSSNLWIRNKVVNSESDTKTTLFP 64
V SN I LSR R ++ AI FS++ S + +L N ++N K LF
Sbjct: 226 VLYSNLIELSR------RLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK--LFR 277
Query: 65 NP-----EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLI 119
E G ++ YS L+S + A+S+ A+M+ + L + +I
Sbjct: 278 EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337
Query: 120 EALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIW 179
+ G + EAD LF + ++P + YN M I
Sbjct: 338 DVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIE 397
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
+ TY ++ + E + + EM+ +G +PN+ YS I+ ++ G +A +
Sbjct: 398 QNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ-------------------- 279
+++R + +D +Y ++I + + G +G A +L +++
Sbjct: 458 FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRT 517
Query: 280 -----------KEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
+ G +I + +I + R Y + +F M+ G +PD + +
Sbjct: 518 EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 577
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
++ G+Q +++ + M G V+ ++ ++ F+ E Q L+S+
Sbjct: 578 LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPN 637
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ S + +A Y + A +V+ M GI
Sbjct: 638 VNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV--TIISCLGEQGKWDTIKKCFESMTS 350
++ RE D+ ++L L + E+ Y P +F ++ + ++D F+ M
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYT-PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQ 183
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE- 409
R Y+ L+ FG+ G F +A +Q ++ + V ++ L + LC+
Sbjct: 184 RALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL--SRRLCDY 241
Query: 410 -QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
+AI + ++ GI P++V N +IN + A + EA + + E+GV P+ V+Y+TL
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 469 MKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ ++ KF E ++ M+ C D
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALD 329
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 191/399 (47%), Gaps = 34/399 (8%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S +IS + G + A + A G+ + Y+++ LI A G G EA +F M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
GL+P L YN V + ++ + +F
Sbjct: 297 YGLRPNLVTYN---------------------AVIDACGKGGMEFKQVAKFF-------- 327
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+EM+ G QP+ ++ ++ + G+W+ A + +E+ R+I D YN+++D
Sbjct: 328 -----DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
K G++ A ++ +M + + PN+V+++++I + G + +ALNLF +M+ G+
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D + T++S + G+ + M S G KK Y L+ +G+ GK+ ++
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+K E VL + + L + Y++ GL ++A+++ + + G+ ++V+ + LI+A
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
G A+S+ + + G+SP++VTY +++ AF R+ D
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 147/297 (49%), Gaps = 1/297 (0%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG-ELGE 270
G+ + +S ++ Y +G+ ++A V ++E + + YN++ID GK G E +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
K F +MQ+ GV+P+ +T+NSL+ R G + A NLF +M + + D + T++
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
+ + G+ D + M + Y+ ++D F + G+F A ++ G+ +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 391 SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
+ L + Y + G E+A+ +L+ M GI+ ++V N L+ + G+Y E V+
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 451 HHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+K V P+L+TY+TL+ + + + E I++ ++ G D L DAL
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 150/332 (45%), Gaps = 1/332 (0%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM-WKK 235
G T + L+ + +G E+ S N MK G +PN Y+ ++ GM +K+
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
+ +E++ + D +NS++ + G A LF +M + ++ ++N+L+
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
C+ G A + + M + + P+ + T+I + G++D F M G
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
Y L+ I+ + G+ + A + ++ + S G+ + AL Y +QG ++ KV
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
M+ E + PN++ + LI+ +S G Y EAM ++ K +G+ D+V Y+ L+ A +
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 476 KKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ M +G +P+ + DA
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 194/436 (44%), Gaps = 32/436 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG-RTSEADMLFKEM 138
+S LIS + G + A+S+ M+ G + + +Y +I+A G G + F EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
G++P +N EM + I + +Y LLD G++
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ + + +M +K PN YS ++ + G + +A + E+R I+LD YN++
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ + K G EAL + +M G++ ++VT+N+L+ + ++G Y + +F++M+ + +
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + T+I + G + + F S G + +Y+ L+D + G +A
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 379 CVQALKSEGVLVSPNI--FCALANAYAQQGLCEQ---------------AIKVLQIMEGE 421
+ + EG +SPN+ + ++ +A+ + ++ A+ L EG
Sbjct: 571 LIDEMTKEG--ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGN 628
Query: 422 GIEPNIVMLNMLINAFSNAGRY-----MEAMS----VYHHIKESGVSPDLVTYTTLMKAF 472
+ I + L +N M+ +S V+ + + + P++VT++ ++ A
Sbjct: 629 RV---IQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNAC 685
Query: 473 IRTKKFDEVPIIYKRM 488
R F++ ++ + +
Sbjct: 686 SRCNSFEDASMLLEEL 701
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 139/292 (47%), Gaps = 42/292 (14%)
Query: 244 RERKISLDTHIYNSIIDTFGKYGELG---------------------------------- 269
RER+ + + +++I T G+YG++
Sbjct: 225 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 284
Query: 270 -EALKLFVKMQKEGVRPNIVTWNSLIKWHCREG--DYTKALNLFSDMQEQGLYPDPKIFV 326
EA+ +F M++ G+RPN+VT+N++I C +G ++ + F +MQ G+ PD F
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVID-ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFN 343
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
++++ G W+ + F+ MT+R ++ Y L+D + G+ A E + + +
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 387 GVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYM 444
++ PN+ + + + +A+ G ++A+ + M GI + V N L++ ++ GR
Sbjct: 404 RIM--PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 445 EAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
EA+ + + G+ D+VTY L+ + + K+DEV ++ M+ + P+
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 133/356 (37%), Gaps = 62/356 (17%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS +I K G D A++L +M LG L SY L+ VGR+ EA + +EM
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+K + YN EM + TY L+D + G +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI- 258
+ E K G + + +YS ++ NG+ A +++E+ + IS + YNSI
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 259 ---------------------------------------IDTFGKYG------------- 266
I FG+
Sbjct: 592 DAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEE 651
Query: 267 ---ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
EL L++F KM + ++PN+VT+++++ R + A L +++ L+ D K
Sbjct: 652 GMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR---LF-DNK 707
Query: 324 IFVTIISCLGEQGK--WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
++ + L Q + W + F+ + A Y L D+ +G+ + AE
Sbjct: 708 VYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAE 763
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 3/183 (1%)
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKK--YGAVYAVLVDIFGQYGKFQNAEECVQALKS 385
II LG + + D +E R +K G + + ++ G+YGK A+ + +
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 386 EGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAG-RYM 444
G + F AL +AY + GL E+AI V M+ G+ PN+V N +I+A G +
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 445 EAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQ 504
+ + ++ +GV PD +T+ +L+ R ++ ++ M D + L
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 505 DAL 507
DA+
Sbjct: 382 DAI 384
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 188/421 (44%), Gaps = 13/421 (3%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+S+++SK K N D +SL ME G YSY +I L R A + +M+
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G +P + + +M + G Y ++D G +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + M+ G + ++ Y+ +V +G W A ++ ++ R I + + ++I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D F K G+ EA+KL+ +M + V P++ T+NSLI C G +A + M +G
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T+I+ + + D K F M RG Y ++ + Q G+ A+E
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLC-----EQAIKVLQIMEGEGIEPNIVMLNMLI 434
+ S PNI Y GLC E+A+ + + M+ IE +I N++I
Sbjct: 372 FSRMDSR-----PNIRTYSILLY---GLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCT 494
+ G +A ++ + G+ PD+V+YTT++ F R +++D+ ++Y++M+ DG
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 495 P 495
P
Sbjct: 484 P 484
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
P+ +SK++ + + + + I D + YN +I+ + AL +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
KM K G P++VT +SLI C+ A++L S M+E G PD I+ TII +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
G + + F+ M G + Y LV G++ +A ++ + ++ +
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
F A+ + + ++G +A+K+ + M ++P++ N LIN GR EA + +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G PD+VTY TL+ F ++K+ DE +++ M G D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 104/229 (45%)
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
L E + LF KM + P+IV ++ ++ + +Y ++LF M+ G+ D +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+I+CL ++ M G + + L++ F Q + +A + V ++ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
I+ + + + GL A+++ ME +G+ + V N L+ +GR+ +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ + + P+++T+T ++ F++ KF E +Y+ M PD
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 186/428 (43%), Gaps = 38/428 (8%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
+P E + Y+ +IS +EG LD+ + + +M + G S +SYT LI A G GR
Sbjct: 138 KPNEHI----YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYE 193
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
+ L M + P + YN V + R +E LL
Sbjct: 194 TSLELLDRMKNEKISPSILTYNT---------------------VINACARGGLDWEGLL 232
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
F EM+ +G QP+ Y+ ++ G+ +A V + + I
Sbjct: 233 GLFA-------------EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIV 279
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
D Y+ +++TFGK L + L +M G P+I ++N L++ + + G +A+ +
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
F MQ G P+ + +++ G+ G++D +++ F M S A Y +L+++FG+
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 370 YGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
G F+ + E + + + A + GL E A K+LQ M I P+
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+I AF A Y EA+ ++ + E G +P + T+ +L+ +F R E I R+
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 490 TDGCTPDR 497
G +R
Sbjct: 520 DSGIPRNR 527
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 182/410 (44%), Gaps = 1/410 (0%)
Query: 80 YSQLISKCCKEG-NLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ +I+ C + G + + + L A+M G Q +Y L+ A G EA+M+F+ M
Sbjct: 214 YNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
G+ P L Y+ EM G +Y +LL+ + +G +
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
++ ++M+ G PN+ YS ++ L+ +G + ++ E++ D YN +
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I+ FG+ G E + LF M +E + P++ T+ +I + G + A + M +
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDI 453
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P K + +I G+ ++ F +M G+ + L+ F + G + +E
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEA 513
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ L G+ + + F A AY Q G E+A+K ME +P+ L +++ +S
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
A E + +K S + P ++ Y ++ + +T+++D+V + + M
Sbjct: 574 FARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 188/430 (43%), Gaps = 1/430 (0%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E P G S Y+ LI+ + G + ++ LL +M+ S +Y +I A G
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 225
Query: 127 RTSEADM-LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETY 185
E + LF EM + G++P + YN M D GI TY
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE 245
L++ F RLE + EM G P+ Y+ ++ Y +G K+A V +++
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
+ + + Y+ +++ FG+ G + +LF++M+ P+ T+N LI+ G + +
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
+ LF DM E+ + PD + + II G+ G + +K + MT+ Y +++
Sbjct: 406 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
Query: 366 IFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEP 425
FGQ ++ A + G S F +L ++A+ GL +++ +L + GI
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPR 525
Query: 426 NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
N N I A+ G++ EA+ Y +++S PD T ++ + + DE +
Sbjct: 526 NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQF 585
Query: 486 KRMETDGCTP 495
+ M+ P
Sbjct: 586 EEMKASDILP 595
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 149/316 (47%), Gaps = 1/316 (0%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y I++ G L+ +EM +G + F Y+ ++ Y NG ++ + E+L+ ++
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEAL-KLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
KIS YN++I+ + G E L LF +M+ EG++P+IVT+N+L+ G
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+A +F M + G+ PD + ++ G+ + + + M S G+ Y VL
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
++ + + G + A +++ G + N + L N + Q G + ++ M+
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
+P+ N+LI F G + E ++++H + E + PD+ TY ++ A + ++
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 484 IYKRMETDGCTPDRKA 499
I + M + P KA
Sbjct: 444 ILQYMTANDIVPSSKA 459
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 36/291 (12%)
Query: 214 QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALK 273
+PN +Y+ ++ L G+ K EV +E+ + +S Y ++I+ +G+ G +L+
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 274 LFVKMQKEGVRPNIVTWNSLIKWHCREG-DYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
L +M+ E + P+I+T+N++I R G D+ L LF++M+ +G+ PD + T++S
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
+G D + F +M G Y+ LV+ FG+ + + + + + S G L
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL--- 314
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
P+I N+L+ A++ +G EAM V+H
Sbjct: 315 --------------------------------PDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
++ +G +P+ TY+ L+ F ++ ++D+V ++ M++ PD +L
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Query: 301 GDYTKALNLFSDMQEQ-GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
GD+ ++L LF MQ Q P+ I+ +IS LG +G D + F+ M S+G +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGL-CEQAIKVLQIM 418
Y L++ +G+ G+++ + E + +K+E + S + + NA A+ GL E + + M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
EGI+P+IV N L++A + G EA V+ + + G+ PDL TY+ L++ F + ++
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 479 DEVPIIYKRMETDGCTPDRKAKQMLQDA 506
++V + M + G PD + +L +A
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEA 326
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSR-GNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
F + +G W + F+ M + K +Y +++ + G+ G E +
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 384 KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRY 443
S+GV S + AL NAY + G E ++++L M+ E I P+I+ N +INA + G
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 444 MEAM-SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQM 502
E + ++ ++ G+ PD+VTY TL+ A DE ++++ M G PD
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 503 LQDALTALER 512
L + L R
Sbjct: 288 LVETFGKLRR 297
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 122/344 (35%), Gaps = 45/344 (13%)
Query: 78 EFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKE 137
E Y +I C K G + A +L M A SS +YT +IEA G EA + F
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
M G P + ++ +VDSGI R R+T+ ++ + G+
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 198 LEDTWST-----------------------------------INEMKMKGFQPNSFVYSK 222
E+ T EMK P+ Y
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 223 IVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE---ALKLFVKMQ 279
++ +Y W E+LEE+ ++S + +I G Y + + K+
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIK--GDYDDDSNWQIVEYVLDKLN 660
Query: 280 KEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPD-----PKIFVTIISCLGE 334
EG I +N+L+ G +A + ++ ++GL+P+ ++ + + E
Sbjct: 661 SEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSE 720
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
G + + + K AV+V + GQ K A E
Sbjct: 721 GGMYTALSVWLNDINDMLLKGDLPQLAVVVSVRGQLEKSSAARE 764
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 212/488 (43%), Gaps = 44/488 (9%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
+RN + + + + LF + RP + +++L++ K D ++L ++ +
Sbjct: 44 LRNGLHSLQFNEALDLFTHMVESRPLPSIID--FTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G Y+ L+ + A +M+ G +P + +
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
+MV+ GI Y ++D G + S ++M+ G +P+ +Y+ +V
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
++G W+ A +L + +RKI D +N++ID F K G+ +A +L+ +M + + PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
I T+ SLI C EG +A +F M+ +G +PD + ++I+ + K D K F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQ 404
M+ +G Y L+ FGQ GK A+E + S GV PNI + L +
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV--PPNIRTYNVLLHCLCY 399
Query: 405 QGLCEQAIKVLQIM---EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE------ 455
G ++A+ + + M E +G+ PNI N+L++ G+ +A+ V+ +++
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 456 -----------------------------SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
GV P++VTYTT++ R E ++++
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Query: 487 RMETDGCT 494
+M+ DG +
Sbjct: 520 KMKEDGVS 527
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 164/338 (48%), Gaps = 4/338 (1%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
MV+S + + LL+ + + + + +++ G + + + ++ + +
Sbjct: 62 HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
A+ L ++ + D + S+I+ F + EA+ + +M + G++P++V +
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
++I C+ G AL+LF M+ G+ PD ++ ++++ L G+W MT R
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCE 409
K + L+D F + GKF +AEE + + +PNIF +L N + +G +
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI--APNIFTYTSLINGFCMEGCVD 299
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A ++ +ME +G P++V LIN F + +AM +++ + + G++ + +TYTTL+
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ F + K + ++ M + G P+ + +L L
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 193/432 (44%), Gaps = 2/432 (0%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G ++ + +++ CK+G +++ + L+Q++ G +Y LI A + G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
EA L M G P + YN EM+ SG+ TY
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
LL G + +T ++M+ + P+ +S ++ L+ +G KA ++E
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ D IY +I + + G + A+ L +M ++G ++VT+N+++ C+ +A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
LF++M E+ L+PD +I + G + F+ M + + Y L+D
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
FG+ G A+E + S+ +L +P + L NA +G +A +V M + I+P
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
+++ N +I + +G + S + G PD ++Y TL+ F+R + + + K
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 487 RMETD--GCTPD 496
+ME + G PD
Sbjct: 645 KMEEEQGGLVPD 656
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 186/456 (40%), Gaps = 37/456 (8%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LIS +G ++ A L+ M GF Y+Y +I L G+ A +F EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
GL P Y +M + + ++ F +G L+
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
N +K G P++ +Y+ ++ Y GM A + E+ ++ ++D YN+I+
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
K LGEA KLF +M + + P+ T LI HC+ G+ A+ LF M+E+ +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA--- 376
D + T++ G+ G DT K+ + M S+ Y++LV+ G A
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 377 --------------------------------EECVQALKSEGVLVSPNIFCALANAYAQ 404
E ++ + SEG + + L + +
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 405 QGLCEQAIKVLQIMEGE--GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
+ +A +++ ME E G+ P++ N +++ F + EA V + E GV+PD
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
TYT ++ F+ E I+ M G +PD K
Sbjct: 693 STYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 158/338 (46%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
E+ SG+ T I+++ G++E + +++++ KG P+ Y+ ++ Y G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ ++A E++ + + S + YN++I+ K+G+ A ++F +M + G+ P+ T+
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
SL+ C++GD + +FSDM+ + + PD F +++S G D F S+
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G +Y +L+ + + G A + +G + + + + ++ + +A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
K+ M + P+ L +LI+ G AM ++ +KE + D+VTY TL+
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTA 509
F + D I+ M + P + +L +AL +
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 174/409 (42%), Gaps = 23/409 (5%)
Query: 103 MEALGFQLSSYSYTHL-----IEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXX 157
++ LGF ++ +T L I L GR S+A MI RL + N
Sbjct: 99 VDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVN------ 152
Query: 158 XXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNS 217
+ S +++L+ +V A +L + ++ KGF +
Sbjct: 153 ------------SLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSI 200
Query: 218 FVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVK 277
+ ++G G + A V +EI + ++ + N +++ K G++ + +
Sbjct: 201 DACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ 260
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
+Q++GV P+IVT+N+LI + +G +A L + M +G P + T+I+ L + GK
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
++ K+ F M G Y L+ + G E+ ++S V+ F +
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
+ + + + G ++A+ ++ G+ P+ V+ +LI + G AM++ + + + G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 458 VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDA 506
+ D+VTY T++ + K E ++ M PD +L D
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 190/427 (44%), Gaps = 35/427 (8%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ LI CC+ G ++++ LL ++ GF + YT LI+ G +A LF
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF---- 221
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
EM G+ TY +L++ G +
Sbjct: 222 -------------------------------FEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +M+ G PN + Y+ ++ +G K A +V +E+RER +S + YN++I
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ +L EA K+ +M+ +G+ PN++T+N+LI C G KAL+L D++ +GL
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P + ++S +G K + M RG K Y +L+D F + + A +
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+++ G++ + + L + + +G +A ++ + M + EPN V+ N +I +
Sbjct: 431 RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
G A+ + ++E ++P++ +Y +++ + +K E + ++M G P
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Query: 500 KQMLQDA 506
++ A
Sbjct: 551 LSLISRA 557
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 166/387 (42%), Gaps = 34/387 (8%)
Query: 144 KPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWS 203
K + LY + EMVD+G + LL + V + WS
Sbjct: 91 KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 204 TINEMKMK----------------------------------GFQPNSFVYSKIVGLYRD 229
NE K K GF PN +Y+ ++
Sbjct: 151 FFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
G +KA ++ E+ + + + Y +I+ K G + +++ KMQ++GV PN+ T
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+N ++ C++G A +F +M+E+G+ + + T+I L + K + K + M
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
S G Y L+D F GK A + LKS G+ S + L + + ++G
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
A K+++ ME GI+P+ V +LI+ F+ + +A+ + ++E G+ PD+ TY+ L+
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPD 496
F + +E ++K M C P+
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPN 477
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 156/327 (47%), Gaps = 9/327 (2%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNS----FVYSKIVGLYRDNGMWKKATEVL 240
YE++++ +V + L + S NEM GF P S ++ + +VG N W E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-- 154
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ K+ LD + + +I + GE+ ++ L +++ + G PN+V + +LI C++
Sbjct: 155 ---NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKK 211
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
G+ KA +LF +M + GL + + + +I+ L + G + +E M G Y
Sbjct: 212 GEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY 271
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
+++ + G+ ++A + ++ GV + + L ++ +A KV+ M+
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS 331
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+GI PN++ N LI+ F G+ +A+S+ +K G+SP LVTY L+ F R
Sbjct: 332 DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSG 391
Query: 481 VPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ K ME G P + +L D
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTF 418
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 201/452 (44%), Gaps = 6/452 (1%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
+RN + + D LF + RP ++ +S+L+S K D + L QM+ L
Sbjct: 53 LRNGIRFMKLDDSLDLFFHMVQCRPLPSIAD--FSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G + + L+ + S A +MI G +P + +
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
+MV G Y ++D + ++++ +N M+ G P+ Y+ ++
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
+G W AT ++ + +R+I D +N++ID K G + EA + + +M + + P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
IVT++ LI C +A +F M +G +PD + +I+ + K + K F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQ 404
M+ RG + Y +L+ + + GK AEE + + GV PNI + L +
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV--HPNIITYNVLLHGLCD 408
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
G E+A+ +L M+ G++ +IV N++I AG +A +Y + G+ PD+ T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
YTT+M + E ++++M+ DG P+
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%)
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
+L+LF M + P F ++S + + K+D + +E M G +L++
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 366 IFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEP 425
F + + A + + G S F +L N + + A+ + M G G +P
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184
Query: 426 NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
N+V+ N +I+ + + A+ + + +++ G+ PD+VTY +L+ + ++ + +
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244
Query: 486 KRMETDGCTPDRKAKQMLQDALTALERRS 514
M PD L DA R S
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVS 273
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 197/444 (44%), Gaps = 3/444 (0%)
Query: 47 IRNKVVNS-ESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEA 105
+RN++ + + D LF + RP + +++L+S K + +SL QM+
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE--FNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 106 LGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXX 165
LG Y+Y+ I + S A + +M+ G +P + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 166 XXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVG 225
+MV+ G T+ L+ + + + +++M +G QP+ Y +V
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 226 LYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRP 285
G A +L ++ +I + I+N+IID+ KY + A+ LF +M+ +G+RP
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 286 NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF 345
N+VT+NSLI C G ++ A L S+M E+ + P+ F +I ++GK +K
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQ 405
E M R Y +L++ F + + A++ + + S+ L + + L N + +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 406 GLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTY 465
E +++ + M G+ N V +I F AG A V+ + + V D++TY
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 466 TTLMKAFIRTKKFDEVPIIYKRME 489
+ L+ K D +I+K ++
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQ 495
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 189/459 (41%), Gaps = 32/459 (6%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S L++ C + A++L+ QM +G++ ++++T LI L + SEA L +M+
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +P L Y +M + I + ++D +E
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
EM+ KG +PN Y+ ++ + G W A+ +L + E+KI+ + +N++ID
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F K G+L EA KL +M + + P+ +T+N LI C +A +F M + P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + + T+I+ + + + + F M+ RG Y ++ F Q G +A+
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+ + S V + L + G + A+ + + ++ +E NI + N +I A
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 441 GR--------------------------------YMEAMSVYHHIKESGVSPDLVTYTTL 468
G+ EA ++ +KE G P+ TY TL
Sbjct: 517 GKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Query: 469 MKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
++A +R + K M + G D ++ + L
Sbjct: 577 IRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/449 (19%), Positives = 192/449 (42%), Gaps = 32/449 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS I+ C+ L A+++LA+M LG++ + + L+ + R S+A L +M+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G KP + +MV G TY +++ G ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +N+M+ + N +++ I+ + A ++ E+ + I + YNS+I
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ YG +A +L M ++ + PN+VT+N+LI +EG +A L +M ++ +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + +I+ + D K+ F+ M S+ Y L++ F + + ++ E
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ + G++ + + + + Q G C+ A V + M + +I+ ++L++ +
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 440 AGRYMEAMSVYHHIKES--------------------------------GVSPDLVTYTT 467
G+ A+ ++ ++++S + PD+VTY T
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT 540
Query: 468 LMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
++ + E ++++M+ DG P+
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPN 569
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 170/373 (45%), Gaps = 4/373 (1%)
Query: 122 LGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRT 181
L ++ + +A LF +M+ P + +N +M GI
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 182 RETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLE 241
TY I ++ F +L + + +M G++P+ S ++ Y + A +++
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
++ E DT + ++I + + EA+ L +M + G +P++VT+ +++ C+ G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
D ALNL + M+ + + IF TII L + + F M ++G + Y
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIME 419
L++ YG++ +A + + + ++PN+ F AL +A+ ++G +A K+ + M
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKK--INPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
I+P+ + N+LIN F R EA ++ + P++ TY TL+ F + K+ +
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 480 EVPIIYKRMETDG 492
+ +++ M G
Sbjct: 416 DGVELFREMSQRG 428
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 150/343 (43%), Gaps = 6/343 (1%)
Query: 176 SGIWR------TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRD 229
SG W + + EIL + +++D +M P+ ++K++
Sbjct: 36 SGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK 95
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
++ + E+++ IS D + Y+ I+ F + +L AL + KM K G P+IVT
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+SL+ +C + A+ L M E G PD F T+I L K + M
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
RG + Y +V+ + G A + +++ + + IF + ++ + E
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
A+ + ME +GI PN+V N LIN N GR+ +A + ++ E ++P++VT+ L+
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
AF + K E +++ M PD +L + R
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 3/308 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI+ C G A LL+ M + ++ LI+A G+ EA+ L +EMI
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P YN+ MV +TY L++ F R+E
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D EM +G N+ Y+ I+ + G A V +++ ++ D Y+ ++
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
YG+L AL +F +QK + NI +N++I+ C+ G +A +LF + +
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IK 532
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T+IS L + F M G Y L+ + + E
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 380 VQALKSEG 387
++ ++S G
Sbjct: 593 IKEMRSSG 600
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 202/442 (45%), Gaps = 10/442 (2%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
+E ++ +I CK ++ A ++ +M GF +Y +L+ L +GR A K
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----K 342
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS-GIWRTRETYEILLDYFVSA 195
++ Y KP + ++N +MV S GI TY L+ +
Sbjct: 343 DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
G + +++M+ KG +PN + Y+ +V + G +A VL E+ + +T +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N +I F K + EA+++F +M ++G +P++ T+NSLI C + AL L DM
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
+G+ + + T+I+ +G+ +K M +G+ Y L+ + G+
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 376 AEECVQALKSEGVLVSPNIFC-ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
A + + +G S NI C L N + G+ E+A++ + M G P+IV N LI
Sbjct: 583 ARSLFEKMLRDGHAPS-NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCT 494
N AGR + ++++ ++ G+ PD VT+ TLM + + ++ DG
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 495 PDRKAKQMLQDALT---ALERR 513
P+ + +L ++ L+RR
Sbjct: 702 PNHRTWSILLQSIIPQETLDRR 723
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 178/441 (40%), Gaps = 12/441 (2%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G S + Y LI K G LL QM+ G + ++ G +
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 132 DMLFKEM--IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
L EM +Y +P YN+ +M+ I T T+ +++
Sbjct: 166 TRLMLEMRNVY-SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
F + ++ S + +M G PNS +Y ++ +A ++LEE+
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
D +N +I K+ + EA K+ +M G P+ +T+ L+ C+ G A +L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESM-TSRGNKKYGAVYAVLVDIFG 368
F + + P+ IF T+I G+ D K M TS G Y L+ +
Sbjct: 345 FYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 369 QYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
+ G A E + ++++G PN+ + L + + + G ++A VL M +G++PN
Sbjct: 401 KEGLVGLALEVLHDMRNKG--CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
V N LI+AF R EA+ ++ + G PD+ T+ +L+ + + +
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 487 RMETDGCTPDRKAKQMLQDAL 507
M ++G + L +A
Sbjct: 519 DMISEGVVANTVTYNTLINAF 539
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 37/274 (13%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E PR G + ++ LIS C+ + A+ LL M + G ++ +Y LI A G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
EA L EM++ G P + TY
Sbjct: 544 EIKEARKLVNEMVFQG-SPLDEI----------------------------------TYN 568
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRE 245
L+ AG ++ S +M G P++ + ++ GL R +GM ++A E +E+
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR-SGMVEEAVEFQKEMVL 627
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
R + D +NS+I+ + G + + L +F K+Q EG+ P+ VT+N+L+ W C+ G
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWD 339
A L + E G P+ + + ++ + Q D
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKV-LQI 417
VY VL+ G G+F+ + + +K EG++ ++F ++ Y + G Q ++ L++
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 418 MEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
EP N+++ + + A +V++ + + P L T+ +MKAF +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 478 FDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
D + + M GC P+ Q L +L+ R
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 197/437 (45%), Gaps = 8/437 (1%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQM--EALGFQLSSYSYTHLIEALGNVGRTSEADM 133
+S Y+ +I +EG ++ + +M E F + +Y+ LI + +GR A
Sbjct: 196 TSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP-DTITYSALISSYEKLGRNDSAIR 254
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
LF EM ++P +Y EM +G T TY L+
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
AGR+++ + +M G P+ + ++ + G ++ T V E+ + +
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV 374
Query: 254 IYNSIIDT-FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
YN++I F + E F KM+ + V P+ T++ LI +C+ KAL L +
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
M E+G P P + ++I+ LG+ +++ + F+ + VYAV++ FG+ GK
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 373 FQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
A + +K++G P+++ AL + + G+ +A +L+ ME G +I
Sbjct: 495 LSEAVDLFNEMKNQGS--GPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
N+++N F+ G A+ ++ IK SG+ PD VTY TL+ F F+E + + M+
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 491 DGCTPDRKAKQMLQDAL 507
G D + DA+
Sbjct: 613 KGFEYDAITYSSILDAV 629
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 136/322 (42%), Gaps = 1/322 (0%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G + Y++LI K G +D A M G +L+ LG VG
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG 352
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYN-IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETY 185
R E +F EM P + YN + +M + + TY
Sbjct: 353 RVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTY 412
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE 245
IL+D + R+E + EM KGF P Y ++ ++ A E+ +E++E
Sbjct: 413 SILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
++ + +Y +I FGK G+L EA+ LF +M+ +G P++ +N+L+ + G +
Sbjct: 473 NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINE 532
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
A +L M+E G D I++ G + FE++ G K G Y L+
Sbjct: 533 ANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLG 592
Query: 366 IFGQYGKFQNAEECVQALKSEG 387
F G F+ A ++ +K +G
Sbjct: 593 CFAHAGMFEEAARMMREMKDKG 614
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 142/307 (46%), Gaps = 3/307 (0%)
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI-RERKISLDTHIYNSIIDTFGKYGE 267
K + FQ + Y ++ + ++ + ++E+ R +S+ + + ++ G+
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKM 177
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG-LYPDPKIFV 326
+ +AL +F + + +P T+NS+I +EG + K ++++M +G +PD +
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
+IS + G+ D+ + F+ M + +Y L+ I+ + GK + A + + +K
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 387 GVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
G + + L + G ++A + M +G+ P++V LN L+N GR E
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTK-KFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
+V+ + +P +V+Y T++KA +K EV + +M+ D +P +L D
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 506 ALTALER 512
R
Sbjct: 418 GYCKTNR 424
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 66/150 (44%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
+SS Y+ +I K G L A+ L +M+ G Y+Y L+ + G +EA+ L
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
++M G + +N +NI + SGI TY LL F
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAH 596
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIV 224
AG E+ + EMK KGF+ ++ YS I+
Sbjct: 597 AGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 204/461 (44%), Gaps = 39/461 (8%)
Query: 36 IPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDR 95
+P+ ++ S L I +N + + +LF + E +L S ++ LI C+ L
Sbjct: 76 LPSIVDFSRLLIAIAKLN-KYEAVISLFRHLEMLGISHDLYS--FTTLIDCFCRCARLSL 132
Query: 96 AMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXX 155
A+S L +M LGF+ S ++ L+ +V R EA L +++ G +P + +YN
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNT--- 189
Query: 156 XXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQP 215
++D G++ + MK G +P
Sbjct: 190 --------------------------------IIDSLCEKGQVNTALDVLKHMKKMGIRP 217
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
+ Y+ ++ +G W + +L ++ IS D ++++ID +GK G+L EA K +
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
+M + V PNIVT+NSLI C G +A + + + +G +P+ + T+I+ +
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
+ D K M+ G Y L + Q GKF AE+ + + S GV F
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
L + G +A+ L+ ++ I+ N++I A + +A ++ +
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLAL 457
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET-DGCTP 495
GVSPD++TY T+M R + + E +Y++M+ DG P
Sbjct: 458 KGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 187/436 (42%), Gaps = 37/436 (8%)
Query: 61 TLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIE 120
TLF + P + +S+L+ K + +SL +E LG YS+T LI+
Sbjct: 65 TLFCDMAESHPLPSIVD--FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 121 ALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWR 180
R S A +M+ G +P +
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSI--------------------------------- 149
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
T+ L++ F R + S ++++ G++PN +Y+ I+ + G A +VL
Sbjct: 150 --VTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVL 207
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ +++ I D YNS+I G G + ++ M + G+ P+++T+++LI + +E
Sbjct: 208 KHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKE 267
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
G +A +++M ++ + P+ + ++I+ L G D KK + S+G Y
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
L++ + + + + + + + +GV + L Y Q G A KVL M
Sbjct: 328 NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS 387
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
G+ P++ N+L++ + G+ +A+ +++S ++TY ++K + K ++
Sbjct: 388 CGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVED 447
Query: 481 VPIIYKRMETDGCTPD 496
++ + G +PD
Sbjct: 448 AWYLFCSLALKGVSPD 463
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 39/333 (11%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
GI ++ L+D F RL S + +M GF+P+ +
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFG--------------- 153
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
S+++ F EA+ L ++ G PN+V +N++I
Sbjct: 154 --------------------SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDS 193
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
C +G AL++ M++ G+ PD + ++I+ L G W + M G
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKV 414
++ L+D++G+ G+ A++ + V+PNI + +L N GL ++A KV
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRS--VNPNIVTYNSLINGLCIHGLLDEAKKV 311
Query: 415 LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
L ++ +G PN V N LIN + A R + M + + GV D TY TL + + +
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Query: 475 TKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
KF + RM + G PD +L D L
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 100/230 (43%)
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
+ +AL LF M + P+IV ++ L+ + Y ++LF ++ G+ D F
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
T+I C + C M G + + LV+ F +F A V +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 387 GVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
G + I+ + ++ ++G A+ VL+ M+ GI P++V N LI ++G + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ + G+SPD++T++ L+ + + + E Y M P+
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 193/433 (44%), Gaps = 6/433 (1%)
Query: 62 LFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEA 121
LF + RP + +++L+S K D +SL +ME LG + Y++ +I
Sbjct: 72 LFSDMVKSRPFPSIVD--FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129
Query: 122 LGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRT 181
+ S A + +M+ G +P +MV+ G
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 182 RETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLE 241
Y ++D R+ D + E++ KG +PN Y+ +V ++ W A +L
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
++ ++KI+ + Y++++D F K G++ EA +LF +M + + P+IVT++SLI C
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
+A +F M +G D + T+I+ + + + K F M+ RG Y
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIME 419
L+ F Q G A+E + G+ SP+I + L G E+A+ + + M+
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGI--SPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
++ +IV +I G+ EA S++ + G+ PD+VTYTT+M
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 480 EVPIIYKRMETDG 492
EV +Y +M+ +G
Sbjct: 488 EVEALYTKMKQEG 500
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 152/346 (43%), Gaps = 4/346 (1%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG 142
L++ C+ + A+SL+ +M +G++ +Y +I++L R ++A FKE+ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTW 202
++P + Y +M+ I TY LLD FV G++ +
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 203 STINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTF 262
EM P+ YS ++ + +A ++ + + + D YN++I+ F
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 263 GKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDP 322
K + + +KLF +M + G+ N VT+N+LI+ + GD KA FS M G+ PD
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 323 KIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQA 382
+ ++ L + G+ + FE M R Y ++ + GK + A +
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 383 LKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
L +G + P+I + + + +GL + + M+ EG+ N
Sbjct: 461 LSLKG--LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 136/310 (43%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I CK ++ A ++E G + + +YT L+ L N R S+A L +MI
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P + Y+ EMV I TY L++ R++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + M KG + Y+ ++ + + ++ E+ +R + +T YN++I
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F + G++ +A + F +M G+ P+I T+N L+ C G+ KAL +F DMQ++ +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
D + T+I + + GK + F S++ +G K Y ++ G E
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 380 VQALKSEGVL 389
+K EG++
Sbjct: 493 YTKMKQEGLM 502
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 103/276 (37%), Gaps = 43/276 (15%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS L+ K G + A L +M + +Y+ LI L R EA+ +F M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G + YN EM G+ TY L+ F AG ++
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
++M G P+ + Y+ ++G DNG +KA + E++++R++ LD Y ++I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 260 DTFGKYGELGEALKLF-----------------------------------VKMQKEGVR 284
K G++ EA LF KM++EG+
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
N T + +GD T + L M G P
Sbjct: 503 KNDCTLS--------DGDITLSAELIKKMLSCGYAP 530
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%)
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
L K R+ A++LFSDM + +P F ++S + + K+D + + M G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
+ + ++++ F + A + + G +L N + ++ A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
++ M G +P+IV N +I++ R +A + I+ G+ P++VTYT L+
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+ ++ + + M TP+ L DA
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 189/432 (43%), Gaps = 2/432 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI CK+ ++A L M GF+ +SY+ +I L G+ +A LF EM
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV-DSGIWRTRETYEILLDYFVSAGRL 198
G+ P + YNI ++ DS ++ +T+ I++ GR+
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+D MK + + + YS ++ D G KA V E+ ERK S+D YN++
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ F + G++ E+L+L+ M+ + NIV++N LIK G +A ++ M +G
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
D + I L G + + + S G YA ++D + + + A
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
V+ + GV ++ ++ AL + +A L+ M G P +V N+LI
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
AG++ EA + + E+G PDL TY+ L+ R +K D ++ + G D
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Query: 499 AKQMLQDALTAL 510
+L L ++
Sbjct: 571 MHNILIHGLCSV 582
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 165/396 (41%), Gaps = 5/396 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI C GN+D+A S+ +++ + +Y ++ G+ E+ L++ M
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 140 YCGLKPRLNL--YNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
+ K +N+ YNI M G + TY I + G
Sbjct: 353 H---KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+ + E++ G + + Y+ I+ ++A+ +++E+ + + L++H+ N+
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+I + LGEA +M K G RP +V++N LI C+ G + +A +M E G
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
PD K + ++ L K D + + G + ++ +L+ GK +A
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ ++ + + L + + G +A + M G++P+I+ N ++
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
AM + + G+ P + T+ L++A +
Sbjct: 650 CMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 6/271 (2%)
Query: 223 IVGLYRDNGMWKKATEVLEEIRERKISLDTHI--YNSIIDTFGKYGELGEALKLFVKMQK 280
++ Y N M +A +V + +RE + I YN++++ F + + + LF +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMRE-IFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 281 EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDT 340
GV PN+ T+N LIK C++ ++ KA M ++G PD + T+I+ L + GK D
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 341 IKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCAL 398
+ F+ M+ RG Y +L+D F + + A E L E V PN+ +
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL-LEDSSVYPNVKTHNIM 261
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
+ ++ G + +K+ + M+ E ++ + LI+ +AG +A SV++ + E
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA 321
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
S D+VTY T++ F R K E +++ ME
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 146/330 (44%), Gaps = 2/330 (0%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
+Y LL+ FV A + S + G PN Y+ ++ + ++KA L+ +
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ D Y+++I+ K G+L +AL+LF +M + GV P++ +N LI +E D+
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 304 TKALNLFSD-MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
A+ L+ +++ +YP+ K +IS L + G+ D K +E M +K Y+
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
L+ G AE L + + + + + G ++++++ +IME +
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVP 482
NIV N+LI G+ EA ++ + G + D TY + ++
Sbjct: 356 -SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 483 IIYKRMETDGCTPDRKAKQMLQDALTALER 512
+ + +E+ G D A + D L +R
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 174/446 (39%), Gaps = 36/446 (8%)
Query: 94 DRAMSLLAQM-EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNI 152
D+A+ + +M E G + + SY L+ A + + + LF G+ P L YN+
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 153 XXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKG 212
M G +Y +++ AG+L+D +EM +G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE-RKISLDTHIYNSIIDTFGKYGELGEA 271
P+ Y+ ++ + K A E+ + + E + + +N +I K G + +
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT---- 327
LK++ +M++ ++ T++SLI C G+ KA ++F+++ E+ D + T
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 328 ------------------------------IISCLGEQGKWDTIKKCFESMTSRGNKKYG 357
+I L E GK D + M ++G
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 358 AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQI 417
Y + + G A +Q ++S G + + ++ + ++ E+A +++
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 418 MEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
M G+E N + N LI R EA + ++G P +V+Y L+ + K
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 478 FDEVPIIYKRMETDGCTPDRKAKQML 503
F E K M +G PD K +L
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSIL 540
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 9/320 (2%)
Query: 19 GGALRCSSHATAIQFSKI---PNSLN--SSNLWIRNKVVNSESDTKTTLFPNPEAPRPGE 73
GG RC +++ +I NS+N S N+ I+ + N + D T ++ P G
Sbjct: 333 GGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWR--LMPAKGY 390
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
Y I C G +++A+ ++ ++E+ G L Y+Y +I+ L R EA
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
L KEM G++ ++ N EM +G T +Y IL+
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDT 252
AG+ + + + EM G++P+ YS ++ GL RD + A E+ + + + D
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI-DLALELWHQFLQSGLETDV 569
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
++N +I G+L +A+ + M+ N+VT+N+L++ + GD +A ++
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGY 629
Query: 313 MQEQGLYPDPKIFVTIISCL 332
M + GL PD + TI+ L
Sbjct: 630 MYKMGLQPDIISYNTIMKGL 649
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E G L Y+ +I CK+ L+ A +L+ +M G +L+S+ LI L
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
R EA +EM G +P + YNI EM+++G +TY
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
ILL +++ ++ G + + +++ ++ G A V+ + R
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ + YN++++ F K G+ A ++ M K G++P+I+++N+++K C + A
Sbjct: 599 NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYA 658
Query: 307 LNLFSDMQEQGLYP 320
+ F D + G++P
Sbjct: 659 MEFFDDARNHGIFP 672
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 185/419 (44%), Gaps = 1/419 (0%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
FY+ +I CK G+++ A + +++ GF + ++ +I G +D L E+
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEV 301
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
GL+ + N ++ + TY IL++ G+
Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKK 361
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
E ++E KG PN+ Y+ ++ Y + + A+++L ++ ER D Y +
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I G + +A+ + VK+ GV P+ +N L+ C+ G + A LFS+M ++ +
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
PD ++ T+I G +D +K F +G K + ++ F + G A
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
C+ + E ++ + + + Y +Q AIK+ + ME +PN+V LIN F
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIY-KRMETDGCTPD 496
G + A + ++ + P++VTYTTL+++ + E + Y + M T+ C P+
Sbjct: 602 CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 176/416 (42%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ L+S K L A + +M G + +YS L++ + N G+ L +
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWG 233
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G P + YN E+ G T ET+ +++ F G
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ ++E+K +G + + + + I+ +G E + I D YN +I+
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILIN 353
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
K G+ A+ + K+G+ PN +++ LI+ +C+ +Y A L M E+G P
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D + +I L G D + RG A+Y +L+ + G+F A+
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+ +L ++ L + + + G ++A KV + +G++ ++V N +I F +
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G EA++ + + E + PD TY+T++ +++ + I++ ME + C P+
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y ++ + G +E+ + E+K+KGF P + ++ + G + + +L E++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
ER + + N+IID ++G + + + +P++ T+N LI C+EG
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
A+ + ++GL P+ + +I + ++D K M RG K Y +L+
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
G +A L GV I+ L + + G A + M I
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
P+ + LI+ F +G + EA V+ E GV D+V + ++K F R+ DE
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 485 YKRMETDGCTPDR 497
RM + PD+
Sbjct: 543 MNRMNEEHLVPDK 555
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 127/298 (42%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
P+ + ++ L + A +V +E+ +R S+D + ++ G++ KL
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
+G PNIV +N++I +C+ GD A +F +++ +G P + F T+I+ +
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
+G + + + RG + ++D ++G + E + + +
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
+ L N ++G E A+ L +G+ PN + LI A+ + Y A + +
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
E G PD+VTY L+ + + D+ + ++ G +PD ML L R
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 121/273 (44%), Gaps = 6/273 (2%)
Query: 206 NEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKY 265
+E GF +SF+ K++ YR ++ + +VL +R + L + ++ + +
Sbjct: 93 DEFFSNGFACSSFL--KLLARYR---IFNEIEDVLGNLRNENVKLTHEALSHVLHAYAES 147
Query: 266 GELGEALKLF-VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKI 324
G L +A++++ ++ P+++ NSL+ + A ++ +M ++G D
Sbjct: 148 GSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYS 207
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALK 384
++ + +GK + +K E +G Y ++ + + G +NA + LK
Sbjct: 208 TCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 385 SEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYM 444
+G + + F + N + ++G + ++L ++ G+ ++ LN +I+A G +
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKV 327
Query: 445 EAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
+ I + PD+ TY L+ + K
Sbjct: 328 DPAESIGWIIANDCKPDVATYNILINRLCKEGK 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 144/397 (36%), Gaps = 68/397 (17%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G + Y+ L+S CK G A L ++M +Y Y LI+ G EA
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+F + G+K + +N ++
Sbjct: 505 RKVFSLSVEKGVKVDVVHHN-----------------------------------AMIKG 529
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
F +G L++ + +N M + P+ F YS I+ Y A ++ + + K +
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD-YTKALNLF 310
Y S+I+ F G+ A + F +MQ + PN+VT+ +LI+ +E KA+ +
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYW 649
Query: 311 SDMQEQGLYPDPKIFVTIIS---------CLGE-----QGKWDTIKKCFESMTSRGNKKY 356
M P+ F ++ L E G+ + F M S G +
Sbjct: 650 ELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDH 709
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAY-------------- 402
A Y + +G + A + +G P F A+ + +
Sbjct: 710 AAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDF 769
Query: 403 ---AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
++GL E A++ Q++E +P I + +++A
Sbjct: 770 CNLGEKGL-EVAVRYSQVLEQHLPQPVICEASTILHA 805
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 183/428 (42%), Gaps = 1/428 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI + D ++L QM+ LG++ + + +T LI GR A L EM
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
L + LYN+ E+ +G+ TY ++ A RL+
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++ P ++ Y+ ++ Y G + +A +LE R + YN I+
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
K G++ EALK+F +M+K+ PN+ T+N LI CR G A L MQ+ GL+
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + ++ L + K D FE M + + L+D G+ G+ +A +
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ + + ++ +L + G E K+ + M + P++ +LN ++
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
AG + +++ IK PD +Y+ L+ I+ +E ++ M+ GC D +A
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 500 KQMLQDAL 507
++ D
Sbjct: 590 YNIVIDGF 597
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 202/468 (43%), Gaps = 36/468 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I CK LD A+ + +E +Y+Y +I G+ G+ EA L +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + YN EM TY IL+D AG+L+
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLD 394
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + M+ G PN + +V + +A + EE+ + + D + S+I
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D GK G + +A K++ KM R N + + SLIK G ++ DM Q
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSR---------------------GNKKY-- 356
PD ++ T + C+ + G+ + + FE + +R N+ Y
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 357 -------GAV-----YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ 404
G V Y +++D F + GK A + ++ +K++G + + ++ + A+
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
++A + + + + IE N+V+ + LI+ F GR EA + + + G++P+L T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+ +L+ A ++ ++ +E + ++ M+ CTP++ +L + L + +
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 182/431 (42%), Gaps = 4/431 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI C+ G LD A L M+ G + + +++ L + EA +F+EM
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
Y P + +M+DS Y L+ F + GR E
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D +M + P+ + + + G +K + EEI+ R+ D Y+ +I
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
K G E +LF M+++G + +N +I C+ G KA L +M+ +G
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P + ++I L + + D FE S+ + +Y+ L+D FG+ G+ A
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 380 VQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
++ L +G+ +PN++ +L +A + +A+ Q M+ PN V +LIN
Sbjct: 680 LEELMQKGL--TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
++ +A + +++ G+ P ++YTT++ + E ++ R + +G PD
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 498 KAKQMLQDALT 508
+ + L+
Sbjct: 798 ACYNAMIEGLS 808
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 191/451 (42%), Gaps = 36/451 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I G D A SLL + A G S +Y ++ L +G+ EA +F+EM
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
P L+ YNI M +G++ T I++D + +L+
Sbjct: 371 K-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 200 DTWSTINEMKMKGFQP-----------------------------------NSFVYSKIV 224
+ + EM K P NS VY+ ++
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 225 GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
+ ++G + ++ +++ + S D + N+ +D K GE + +F +++
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
P+ +++ LI + G + LF M+EQG D + + +I + GK + +
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ 404
E M ++G + Y ++D + + A + KS+ + ++ I+ +L + + +
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
G ++A +L+ + +G+ PN+ N L++A A EA+ + +KE +P+ VT
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
Y L+ + +KF++ + ++ M+ G P
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 176/418 (42%), Gaps = 11/418 (2%)
Query: 55 ESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYS 114
+S K LFPN + ++ + CK LD A ++ +M+ +
Sbjct: 401 DSMQKAGLFPNVRT-----------VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 115 YTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV 174
+ LI+ LG VGR +A ++++M+ + +Y +M+
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
+ + +D AG E + E+K + F P++ YS ++ G
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
+ E+ ++E+ LDT YN +ID F K G++ +A +L +M+ +G P +VT+ S+I
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
+ +A LF + + + + + I+ ++I G+ G+ D E + +G
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKV 414
+ L+D + + A C Q++K + + L N + +A
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 415 LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
Q M+ +G++P+ + +I+ + AG EA +++ K +G PD Y +++
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 169/405 (41%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ LI K G +D A + +M + +S YT LI+ N GR + ++K+MI
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
P L L N E+ +Y IL+ + AG
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+T+ MK +G ++ Y+ ++ + G KA ++LEE++ + Y S+I
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K L EA LF + + + + N+V ++SLI + G +A + ++ ++GL
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + +++ L + + + CF+SM Y +L++ + KF A
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
Q ++ +G+ S + + + A+ G +A + + G P+ N +I SN
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
R M+A S++ + G+ T L+ + ++ I+
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 154/366 (42%), Gaps = 38/366 (10%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPN-SFVYSKIVGLYRDNGMWKKATEVLE 241
E+Y LL + + EM + GF P+ + ++G + N + ++ +V++
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKL-REGYDVVQ 157
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
+R+ K Y ++I F L LF +MQ+ G P + + +LI+ +EG
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
AL+L +M+ L D ++ I G+ GK D K F + + G K Y
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 362 VLVDI-----------------------------------FGQYGKFQNAEECVQALKSE 386
++ + +G GKF A ++ +++
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 387 GVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
G + S + + + G ++A+KV + M+ + PN+ N+LI+ AG+ A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTA 396
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDA 506
+ ++++G+ P++ T ++ +++K DE +++ M+ CTPD L D
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 507 LTALER 512
L + R
Sbjct: 457 LGKVGR 462
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 206/452 (45%), Gaps = 9/452 (1%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
EA R + L++ Y ++I C+ N++RA +L+ +ME G Y +++ V
Sbjct: 404 EAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ ++FK + CG P + Y M + G+ +TY
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
++++ FV + ++ +M +G +P+ +Y+ I+ + G +A + ++E+++
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ T + II + K G++ +L++F M++ G P + T+N LI + KA
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA---VYAVL 363
+ + +M G+ + + I+ G DT K FE T N+ Y L
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVG--DT-GKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ + G+ Q+A + + + + + ++ L + +A++G +A ++Q M+ EG+
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
+P+I I+A S AG A ++ GV P++ TYTTL+K + R ++
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 484 IYKRMETDGCTPDRKAKQMLQDALTALERRST 515
Y+ M+ G PD+ L LT+L R++
Sbjct: 821 CYEEMKAMGIKPDKAVYHCL---LTSLLSRAS 849
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 173/480 (36%), Gaps = 70/480 (14%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEA--------------------------- 121
+ G++ RA +M A G +S YT LI A
Sbjct: 321 RRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLV 380
Query: 122 --------LGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM 173
G AD F E ++Y EM
Sbjct: 381 TYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREM 440
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
+ GI Y ++D + + +K GF P Y ++ LY G
Sbjct: 441 EEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKI 500
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
KA EV ++E + + Y+ +I+ F K + A +F M KEG++P+++ +N++
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 294 IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK-------WDTIKKC-- 344
I C G+ +A+ +MQ+ P + F+ II + G +D +++C
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 345 --------------------------FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
+ MT G Y ++ + G A E
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
L++EG+ V + AL A + G + A+ V + M I N + N+LI+ ++
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
G EA + +K+ GV PD+ TYT+ + A + + + ME G P+ K
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 800
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 126/290 (43%)
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D W + K +P+ + +V Y G +A E E +R R I+ + IY S+I
Sbjct: 292 DNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLI 351
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ ++ EAL KM++EG+ ++VT++ ++ + G A F + +
Sbjct: 352 HAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT 411
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
+ I+ II + + + M G A+Y ++D + +
Sbjct: 412 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVV 471
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ LK G + + L N Y + G +A++V ++M+ EG++ N+ +M+IN F
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+ A +V+ + + G+ PD++ Y ++ AF D K M+
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 139/318 (43%), Gaps = 6/318 (1%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
+R + +++ ++ G + T M+ +G P S +Y+ ++ Y +A +
Sbjct: 308 SRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCV 367
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+++E I + Y+ I+ F K G A F + ++ N + +I HC+
Sbjct: 368 RKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQT 427
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTII---SCLGEQGKWDTIKKCFESMTSRGNKKYG 357
+ +A L +M+E+G+ I+ T++ + + ++ K + F+ + G
Sbjct: 428 CNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVV---FKRLKECGFTPTV 484
Query: 358 AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQI 417
Y L++++ + GK A E + +K EGV + + + N + + A V +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 418 MEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
M EG++P++++ N +I+AF G A+ +++ P T+ ++ + ++
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 478 FDEVPIIYKRMETDGCTP 495
++ M GC P
Sbjct: 605 MRRSLEVFDMMRRCGCVP 622
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 110/242 (45%)
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
+ ++ +G+ G++ A + F +M+ G+ P + SLI + D +AL+ M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
E+G+ + I+ + G + F+ ++Y ++ Q +
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 375 NAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
AE V+ ++ EG+ I+ + + Y ++ + V + ++ G P +V LI
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCT 494
N ++ G+ +A+ V +KE GV +L TY+ ++ F++ K + +++ M +G
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 495 PD 496
PD
Sbjct: 552 PD 553
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 106/228 (46%)
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
+P+ + ++K++ R GD +A F M+ +G+ P +I+ ++I D
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
C M G + Y+V+V F + G + A+ K ++ +I+ + A+
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
Q E+A +++ ME EGI+ I + + +++ ++ + + V+ +KE G +P +V
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALE 511
TY L+ + + K + + + M+ +G + K M+ + L+
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 181/390 (46%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI CK GN +++ + +M+A + S ++ L++ L G +A+ + KEM
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P ++I VDSG+ T ILL+ G++E
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ KG PN +Y+ ++ Y G A +E + ++ + D YN +I
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F + GE+ A K KM+ +GV P++ T+N LI + R+ ++ K ++ +M++ G
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + T+I+CL + K + M RG +Y +L+D GK ++A
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ + +G+ ++ + L + + G +A +L + +G++P++ N LI+ +
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
AG +++Y +K SG+ P L TY L+
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 4/420 (0%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y + I K ++ + + L +M+ S + Y LI+ L R ++A+ LF EM
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
+ L P L YN M I + T+ LL AG +
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
ED + + EMK GF P++F +S + Y N + A V E + + ++ + + +
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
++ K G++ +A ++ + +G+ PN V +N++I +CR+GD A M++QG+
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
PD + +I E G+ + +K M +G Y +L+ +G+ +F +
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 379 CVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
++ ++ G + PN+ + L N + +A V + ME G+ P + + NMLI+
Sbjct: 481 ILKEMEDNGTM--PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ G+ +A + + G+ +LVTY TL+ T K E + + G PD
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 176/405 (43%), Gaps = 8/405 (1%)
Query: 108 FQLSSYSYTHLIEA---LGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXX 164
F+ S + Y I+A L +VG+ E LF M + + P + +YN+
Sbjct: 175 FRPSKFMYGKAIQAAVKLSDVGKGLE---LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 165 XXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV 224
EM+ + + TY L+D + AG E ++ MK +P+ ++ ++
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 225 -GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
GL++ GM + A VL+E+++ D ++ + D + + AL ++ GV
Sbjct: 292 KGLFK-AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
+ N T + L+ C+EG KA + +GL P+ I+ T+I +G +
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
E+M +G K Y L+ F + G+ +NAE+ V +K +GV S + L Y
Sbjct: 411 KIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
++ ++ +L+ ME G PN+V LIN + +EA V +++ GVSP +
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
Y L+ K ++ K M G + L D L+
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
+ GI+ + ++ +LLD+ V + T + + F+P+ F+Y K +
Sbjct: 137 NEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
K E+ ++ +I IYN +ID K + +A +LF +M + P+++T+N+LI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 295 KWHCREGDYTKAL-----------------------------------NLFSDMQEQGLY 319
+C+ G+ K+ N+ +M++ G
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD F + K + +E+ G K ++L++ + GK + AEE
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ ++G++ + I+ + + Y ++G A ++ ME +G++P+ + N LI F
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G A + +K GVSP + TY L+ + R +FD+ I K ME +G P+
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 126/273 (46%), Gaps = 4/273 (1%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ LI CC +G ++ A +M G +L+ +Y LI+ L G+ SEA+ L E+
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
GLKP + YN EM SGI T +TY +L+ G +
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-I 649
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
E T EM +K P+ VY+ ++ Y +G +KA + +++ E+ I LD YNS+
Sbjct: 650 ELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I K G+L E L +M + P T+N ++K HC DY A + +MQE+G
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
D I ++S L E+ + + M R
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 174/418 (41%), Gaps = 8/418 (1%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S L++ CKEG +++A +L + A G + Y +I+ G A M + M
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G+KP YN +M G+ + ETY IL+ + +
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ + EM+ G PN Y ++ +A V ++ +R +S IYN +ID
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
G++ +A + +M K+G+ N+VT+N+LI G ++A +L ++ +GL P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D + ++IS G G +E M G K Y +L+ + + G E
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI-----ELT 652
Query: 381 QALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ L E L P+ ++ + + YA G E+A + + M + I + N LI
Sbjct: 653 ERLFGEMSL-KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G+ E S+ + + P+ TY ++K K + + Y+ M+ G D
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 175/411 (42%), Gaps = 6/411 (1%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ +I C++G+L A + ME G + +Y LI +G A+ +M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
G+ P + YNI EM D+G +Y L++ +L
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ +M+ +G P +Y+ ++ G + A +E+ ++ I L+ YN++
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
ID G+L EA L +++ ++G++P++ T+NSLI + G+ + + L+ +M+ G+
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P K + +IS ++G + ++ F M+ + + VY ++ + +G + A
Sbjct: 631 KPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDL---LVYNGVLHCYAVHGDMEKAFN 686
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQG-LCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ + + + + + +L + G LCE ++ M +EP N+++
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE-VRSLIDEMNAREMEPEADTYNIIVKGH 745
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
YM A Y ++E G D+ L+ + E I+ M
Sbjct: 746 CEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 123/281 (43%)
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
+ F Y + L ++ M +A ++ +R I + ++D K + + +F
Sbjct: 108 HDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVF 167
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
+ + + RP+ + I+ + D K L LF+ M+ +YP I+ +I L +
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG 227
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
+ + ++ F+ M +R Y L+D + + G + + + + +K++ + S F
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
L + G+ E A VL+ M+ G P+ ++L + +S+ + A+ VY +
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
SGV + T + L+ A + K ++ I R G P+
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 86/209 (41%)
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
++A +LF ++ +G+YP ++ L + ++ F ++ + +Y
Sbjct: 126 SEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 185
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ + E +K + + S I+ L + + A ++ M +
Sbjct: 186 IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
P+++ N LI+ + AG ++ V +K + P L+T+ TL+K + ++
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 484 IYKRMETDGCTPDRKAKQMLQDALTALER 512
+ K M+ G PD +L D ++ E+
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 4/193 (2%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G + Y+ LIS GN+ R ++L +M+ G + + +Y HL+ +L
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY-HLLISLCTKE 647
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ LF EM LKP L +YN +M++ I + TY
Sbjct: 648 GIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
L+ + G+L + S I+EM + +P + Y+ IV + + + A E++E+
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Query: 247 KISLDTHIYNSII 259
LD I N ++
Sbjct: 765 GFLLDVCIGNELV 777
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 190/450 (42%), Gaps = 2/450 (0%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
+RN + N + + LF RP + +++L+S K D +SL QM+ L
Sbjct: 55 LRNGLHNLQFNDALDLFTRMVHSRPLPSIID--FTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G + ++ + + A +M+ G +P L +
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
+++ G TY L+ L N+M G +PN Y+ +V
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
+ G W A +L ++ +R+I + + ++ID F K G+L EA +L+ M + V P+
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
+ T+ SLI C G +A +F M+ G YP+ I+ T+I + + + K F
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
M+ +G Y VL+ + G+ A+E + S + L + G
Sbjct: 353 EMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYT 466
E+A+ + + M ++ NIV ++I G+ +A ++ + G+ P+++TYT
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYT 472
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
T++ F R E ++K+M+ DG P+
Sbjct: 473 TMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 146/324 (45%), Gaps = 4/324 (1%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
LL R + S +M++ G P + ++ + +A+ L ++ +
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
D + S+++ + + + +A+ LF ++ G +PN+VT+ +LI+ C+ A+
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
LF+ M G P+ + +++ L E G+W M R + + L+D F
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEP 425
+ GK A+E + V P++F +L N GL ++A ++ +ME G P
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVY--PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 426 NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
N V+ LI+ F + R + M +++ + + GV + +TYT L++ + + D ++
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 486 KRMETDGCTPDRKAKQMLQDALTA 509
+M + PD + +L D L
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCC 410
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 180/435 (41%), Gaps = 70/435 (16%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI C+ G L+ A L QM G Q S+ +YT LI+AL + G +A LF EMI
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G KP ++ TY +L+D G++E
Sbjct: 329 PRGCKPNVH-----------------------------------TYTVLIDGLCRDGKIE 353
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +M P+ Y+ ++ Y +G A E+L + +R + +N ++
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + G+ +A+ L +M G+ P+IV++N LI CREG A L S M +
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD F II+ +QGK D M +G L+D + GK ++A
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 380 VQALKSEGVLVSPN-----------------------------------IFCALANAYAQ 404
++ L +L +P+ + L + +
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
G + ++L++M+ G PN+ ++IN GR EA + +++SGVSP+ VT
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 465 YTTLMKAFIRTKKFD 479
YT ++K ++ K D
Sbjct: 654 YTVMVKGYVNNGKLD 668
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 193/437 (44%), Gaps = 7/437 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM- 138
Y +++ CK G + A ++++ +GF L S+ T L+ +A +F M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 139 --IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
+ C P Y+I +M + G + TY +L+ G
Sbjct: 258 KEVTCA--PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
++ ++ +EM +G +PN Y+ ++ GL RD G ++A V ++ + +I Y
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRD-GKIEEANGVCRKMVKDRIFPSVITY 374
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N++I+ + K G + A +L M+K +PN+ T+N L++ CR G KA++L M +
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
GL PD + +I L +G +T K SM + + +++ F + GK
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
A + + +G+ + L + + G A+ +L+ + I LN++++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 436 AFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
S + E +++ I + G+ P +VTYTTL+ IR+ I + M+ GC P
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 496 DRKAKQMLQDALTALER 512
+ ++ + L R
Sbjct: 615 NVYPYTIIINGLCQFGR 631
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 132/296 (44%), Gaps = 1/296 (0%)
Query: 202 WSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDT 261
+ T M+ GF Y IV NG + A + +I + LD+HI S++
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239
Query: 262 FGKYGELGEALKLFVKMQKE-GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F + L +ALK+F M KE PN V+++ LI C G +A L M E+G P
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + +I L ++G D F+ M RG K Y VL+D + GK + A
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+ + + + S + AL N Y + G A ++L +ME +PN+ N L+
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G+ +A+ + + ++G+SPD+V+Y L+ R + + M PD
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 2/330 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI+ CK+G + A LL ME + + ++ L+E L VG+ +A L K M+
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
GL P + YN+ M I T+ +++ F G+ +
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + M KG + + ++ G + A +LE + + +I H N I+
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K ++ E L + K+ K G+ P++VT+ +L+ R GD T + + M+ G
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + II+ L + G+ + +K +M G Y V+V + GK A E
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 380 VQALKSEGVLVSPNIFCALANAY--AQQGL 407
V+A+ G ++ I+ +L + +Q+G+
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKGI 703
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 203/467 (43%), Gaps = 7/467 (1%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
+RN++ + D +LF RP + ++++++ K D + L +ME L
Sbjct: 51 LRNELHCIKFDDAFSLFCEMLQSRPIPSIVD--FTRVLTVIAKMNKFDIVIYLYHKMENL 108
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G YS+T LI R S A L +M+ G +P +
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
M G Y +++ L + M+ KG + ++ Y+ ++
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
++G W A +L ++ +RKI + + ++IDTF K G L EA L+ +M + V PN
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
+ T+NSLI C G A +F M +G +PD + T+I+ + + + K F
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQ 404
MT +G Y L+ + Q GK A++ + G VSP+I + L +
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG--VSPDIVTYNILLDCLCN 406
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
G E+A+ +++ ++ ++ +I+ N++I + EA ++ + GV PD +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTP-DRKAKQMLQDALTAL 510
Y T++ R E + +RM+ DG P +R + L+D T+L
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSL 513
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 183/440 (41%), Gaps = 8/440 (1%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
+S ++ C +G LD A+ L +M G ++ HL+ L G +AD L +EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
G P YN M GI R T I++ G +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRD----NGMWKKATEVLEEIRERKISLDTHI 254
+ + E + Q N+ + I + D NG +A EV +E+ ++ + D+ +
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
YN II G + A M K GV P++ T+N+LI C+EG + +A +L MQ
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
G+ PD + II L G + + SM ++ V++D +G+YG
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 375 NAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
+A + + S GV PN++ AL + Y + G A V M I P+ N+
Sbjct: 423 SALSVLNLMLSYGV--KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
L+ A G A +Y + G PD++TYT L++ + + + R++ G
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Query: 493 CTPDRKAKQMLQDALTALER 512
T D +L T L+R
Sbjct: 541 ITIDHVPFLILAKKYTRLQR 560
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
S Y+ +I C GN+ A + M G ++Y LI AL G+ EA L
Sbjct: 300 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
M G+ P Y + M+ S + + +++D + G
Sbjct: 360 TMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYG 419
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
S +N M G +PN + + ++ Y G A V E+R KI DT YN
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 479
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
++ G L A +L+ +M + G +P+I+T+ L++ C +G KA +L S +Q
Sbjct: 480 LLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQAT 539
Query: 317 GLYPDPKIFVTI 328
G+ D F+ +
Sbjct: 540 GITIDHVPFLIL 551
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 184/426 (43%), Gaps = 1/426 (0%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G + + FY+++++ +L A+M G + ++ LI+AL + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
++ ++M GL P + +MV+ G + + +++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 192 FVSAGRLEDTWSTINEMK-MKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
F GR+ED + I EM GF P+ + ++ +V G K A E+++ + +
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D + YNS+I K GE+ EA+++ +M PN VT+N+LI C+E +A L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+ +G+ PD F ++I L + FE M S+G + Y +L+D
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
GK A ++ ++ G S + L + + + +A ++ ME G+ N V
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
N LI+ + R +A + + G PD TY +L+ F R + I + M +
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 491 DGCTPD 496
+GC PD
Sbjct: 569 NGCEPD 574
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 223/513 (43%), Gaps = 16/513 (3%)
Query: 9 SNQISLSRNHGGALRCSSHATAIQFSKIPNS--LNSSNLWIRNKVVNSESDTKTTLFPNP 66
S ++L+ +H +L + ++ I F+ P+S L+S+++ + + + + D+ N
Sbjct: 15 SQAVTLT-HHSFSLNLTPPSSTISFAS-PHSAALSSTDVKLLDSLRSQPDDSAALRLFNL 72
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
+ +P Y +++ + + G+ D +L M++ ++ + ++ LIE+
Sbjct: 73 ASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFE 132
Query: 127 RTSEADMLFKEMI-YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETY 185
E + MI GLKP + YN +M GI T+
Sbjct: 133 LQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTF 192
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE 245
+L+ A +L + +M G P+ ++ ++ Y + G A + E++ E
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKM-QKEGVRPNIVTWNSLIKWHCREGDYT 304
S N I+ F K G + +AL +M ++G P+ T+N+L+ C+ G
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
A+ + M ++G PD + ++IS L + G+ + + M +R Y L+
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC-----EQAIKVLQIME 419
+ + + A E + L S+G+L F +L QGLC A+++ + M
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLI-----QGLCLTRNHRVAMELFEEMR 427
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
+G EP+ NMLI++ + G+ EA+++ ++ SG + ++TY TL+ F + K
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 480 EVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
E I+ ME G + + L D L R
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 175/404 (43%), Gaps = 34/404 (8%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
+EG+LD A+ + QM G S+ S ++ GR +A +EM
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN-------- 287
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
G + + T+ L++ AG ++ ++ M
Sbjct: 288 --------------------------QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+G+ P+ + Y+ ++ G K+A EVL+++ R S +T YN++I T K ++
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
EA +L + +G+ P++ T+NSLI+ C ++ A+ LF +M+ +G PD + +
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
I L +GK D + M G + Y L+D F + K + AEE ++ GV
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + L + + E A +++ M EG +P+ N L+ F G +A
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
+ + +G PD+VTY TL+ + + + + + ++ G
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 186/441 (42%), Gaps = 23/441 (5%)
Query: 88 CKEGNLDRAMSLLAQMEAL-GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPR 146
CKEG ++ A++ + +M GF Y++ L+ L G A + M+ G P
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 147 LNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTIN 206
+ YN +M+ TY L+ ++E+
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 207 EMKMKGFQPNSFVYSKIVG---LYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFG 263
+ KG P+ ++ ++ L R++ + A E+ EE+R + D YN +ID+
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNH---RVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 264 KYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
G+L EAL + +M+ G +++T+N+LI C+ +A +F +M+ G+ +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 324 IFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
+ T+I L + + + + + M G K Y L+ F + G + A + VQA+
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 384 KSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAG 441
S G P+I + L + + G E A K+L+ ++ +GI N +I
Sbjct: 567 TSNG--CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 442 RYMEAMSVYHHIKESG-VSPDLVTYTTLMKAF------IRTKKFDEVPIIYKRMETDGCT 494
+ EA++++ + E PD V+Y + + IR + V + + +E G
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR----EAVDFLVELLEK-GFV 679
Query: 495 PDRKAKQMLQDALTALERRST 515
P+ + ML + L L T
Sbjct: 680 PEFSSLYMLAEGLLTLSMEET 700
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 188/416 (45%), Gaps = 2/416 (0%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG 142
LI CK G +D AM L +M+ +G + YT LI + G LF E++ G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTW 202
P YN M++ G+ TY L+D G+ ++
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 203 STINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTF 262
+N M K +PN+ Y+ I+ +G+ A E++E +++R+ D YN ++
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 263 GKYGELGEALKLFVKMQKEG--VRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
G+L EA KL M K+ P+++++N+LI C+E +AL+++ + E+
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D +++ + G + + ++ ++ + Y ++D F + G A+ +
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
++ + S + L ++ ++G +QA ++ + M+ + P++V N++I+ A
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G A S+ + +G+SPDL TY+ L+ F++ DE + +M G PD
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 172/382 (45%), Gaps = 2/382 (0%)
Query: 96 AMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXX 155
A +LA M GF + Y++ L++ L +A L +EM L P + YN
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 156 XXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQP 215
EM SG + T+ IL+D F AG++++ + EMK G +
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
+ VY+ ++ + D G + + +E+ ER S YN++I F K G+L EA ++F
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
M + GVRPN+ T+ LI C G +AL L + M E+ P+ + II+ L +
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI- 394
G + E M R + Y +L+ G A + + + + P++
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 395 -FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI 453
+ AL + ++ QA+ + ++ + + V N+L+N+ AG +AM ++ I
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 454 KESGVSPDLVTYTTLMKAFIRT 475
+S + + TYT ++ F +T
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKT 507
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 6/312 (1%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRER 246
LL+ +V + + + M +GF N + ++ ++ GL R N KA +L E+R
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR-NLECGKAVSLLREMRRN 171
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ D YN++I F + EL +AL+L +M+ G ++VTW LI C+ G +A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
+ +M+ GL D ++ ++I + G+ D K F+ + RG+ Y L+
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIE 424
F + G+ + A E + + GV PN++ L + G ++A+++L +M + E
Sbjct: 292 FCKLGQLKEASEIFEFMIERGV--RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
PN V N++IN G +A+ + +K+ PD +TY L+ DE +
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 485 YKRMETDGCTPD 496
M D D
Sbjct: 410 LYLMLKDSSYTD 421
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 164/385 (42%), Gaps = 10/385 (2%)
Query: 47 IRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEAL 106
IR E D LF E G+ + Y+ LI CK G L A + M
Sbjct: 254 IRGFCDCGELDRGKALFD--EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G + + Y+YT LI+ L VG+T EA L MI +P YNI
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM-KMKGF-QPNSFVYSKIV 224
M TY ILL + G L++ + M K + P+ Y+ ++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 225 -GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
GL ++N + +A ++ + + E+ + D N ++++ K G++ +A++L+ ++ +
Sbjct: 432 HGLCKENRL-HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
N T+ ++I C+ G A L M+ L P + ++S L ++G D +
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANA 401
FE M N + +++D + G ++AE + + G +SP++F L N
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG--LSPDLFTYSKLINR 608
Query: 402 YAQQGLCEQAIKVLQIMEGEGIEPN 426
+ + G ++AI M G EP+
Sbjct: 609 FLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 18/282 (6%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSY------SYTHLIEALGNVGRTSEA-- 131
Y+ L+ C +G+LD A LL M + SSY SY LI L R +A
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLM----LKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 132 --DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
D+L +++ G R+ NI ++ DS I R +TY ++
Sbjct: 446 IYDLLVEKL---GAGDRVT-TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
D F G L + +M++ QP+ F Y+ ++ G +A + EE++
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
D +N +ID K G++ A L V M + G+ P++ T++ LI + G +A++
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
F M + G PD I +++ QG+ D + + + + +
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 117/287 (40%), Gaps = 20/287 (6%)
Query: 243 IRERKISLDTHIYNSII--DTFGKYGELGEALKLFVKMQK-------------EGVRPNI 287
+R R L Y ++ DTF + L L+ +V+M+K G N+
Sbjct: 83 VRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNV 142
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES 347
N L+K CR + KA++L +M+ L PD + T+I E + + +
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGL 407
M G + +L+D F + GK A ++ +K G+ ++ +L + G
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 408 CEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTT 467
++ + + G P + N LI F G+ EA ++ + E GV P++ TYT
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 468 LMKAFIRTKKFDEV-----PIIYKRMETDGCTPDRKAKQMLQDALTA 509
L+ K E +I K E + T + ++ +D L A
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 153/355 (43%), Gaps = 20/355 (5%)
Query: 73 EELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEAD 132
EE ++ Y+ +I+K CK+G + A+ ++ M+ + + +Y L+ L G EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA- 406
Query: 133 MLFKEMIYCGLK------PRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+++Y LK P + YN +V+ R T
Sbjct: 407 ---SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 187 ILLDYFVSAGRLE---DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
ILL+ + AG + + W I++ K+ NS Y+ ++ + GM A +L ++
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKI---VRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
R ++ YN ++ + K G L +A +LF +MQ++ P++V++N +I + GD
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
A +L M GL PD + +I+ + G D F+ M G + + +
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV 640
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA----LANAYAQQGLCEQAIKV 414
+ G+ E V+ L + +++ + C + N+ A L ++ ++V
Sbjct: 641 LKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 203/468 (43%), Gaps = 37/468 (7%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
+E Y LI+ + G AM+L+ M S +Y +LI A G+ G EA + K
Sbjct: 178 AETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCK 237
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEIL-------- 188
+M G+ P L +NI M + + T+ I+
Sbjct: 238 KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 297
Query: 189 -----LDYFVS------------------------AGRLEDTWSTINEMKMKGFQPNSFV 219
LD F S G +E+ + M +G +PN
Sbjct: 298 QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357
Query: 220 YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ 279
Y+ ++G Y +GM A VL +I++ I D Y +++++G+ + G+A ++F+ M+
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
Query: 280 KEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWD 339
KE +PN+VT+N+LI + G +A+ +F M++ G+ P+ T+++ K
Sbjct: 418 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 477
Query: 340 TIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALA 399
+ + SRG A Y + + + + A Q+++ + V F L
Sbjct: 478 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+ + +AI L+ ME I + + ++ A+S G+ EA S+++ +K +G
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 597
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
PD++ YT+++ A+ ++K+ + ++ ME +G PD A L A
Sbjct: 598 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 195/475 (41%), Gaps = 41/475 (8%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
++ Y+ +I + +D+A L +M+ + + +Y LI A G G+ A L
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
+M+ + P + YN +M D+G+ T+ I+L + S
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL--DTHI 254
+ S MK +P++ ++ I+ G +A ++ +RE++ D
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
+ SI+ + GE+ +F M EG++PNIV++N+L+ + G AL++ D++
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
+ G+ PD + +++ G + K+ F M K Y L+D +G G
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 375 NAEECVQALKSEGVLVSPNIF--CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
A E + ++ +G+ PN+ C L A ++ VL + GI N N
Sbjct: 443 EAVEIFRQMEQDGI--KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE------------ 480
I ++ NA +A+++Y +++ V D VT+T L+ R K+ E
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 560
Query: 481 VPI-----------------------IYKRMETDGCTPDRKAKQMLQDALTALER 512
+P+ I+ +M+ GC PD A + A A E+
Sbjct: 561 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 615
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 155/366 (42%), Gaps = 38/366 (10%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY L+D + S G L + +M+ G +PN ++ + VL
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR---- 299
+ R I+L+T YNS I ++ EL +A+ L+ M+K+ V+ + VT+ LI CR
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 300 -------------------------------EGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
+G T+A ++F+ M+ G PD + ++
Sbjct: 547 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 606
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
+ KW + F M + G + + L+ F + G+ N + ++ + +
Sbjct: 607 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ +F + +A ++AI ++Q+M+ +I + N +++ F +G+ M
Sbjct: 667 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 726
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+++ I SGV +L TY L++ + + + + + M G P + QM +D ++
Sbjct: 727 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQP---SNQMYRDIIS 783
Query: 509 ALERRS 514
ER +
Sbjct: 784 FGERSA 789
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%)
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
AL NA+ + G A+ ++ M I P+ N LINA ++G + EA+ V + ++
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 242
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERRS 514
GV PDLVT+ ++ A+ +++ + ++ M+ PD ++ L+ L + S
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 300
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 175/393 (44%), Gaps = 3/393 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +IS CK G ++ A+S+L +M +Y ++ +L + G+ +A + M+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
P + Y I EM D G TY +L++ GRL+
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +N+M G QPN ++ I+ G W A ++L ++ + S +N +I
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + G LG A+ + KM + G +PN +++N L+ C+E +A+ M +G Y
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T+++ L + GK + + ++S+G Y ++D + GK A +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ ++++ + + +L +++G ++AIK E GI PN V N ++
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ + A+ + G P+ +YT L++
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 172/409 (42%), Gaps = 5/409 (1%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
+ G L+ L M G T LI +G+T +A + + + G P +
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
YN+ M + TY +L +G+L+ ++ M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 209 KMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
+ P+ Y+ ++ RD+G+ A ++L+E+R+R + D YN +++ K G
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVG-HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
L EA+K M G +PN++T N +++ C G + A L +DM +G P F
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+I+ L +G E M G + Y L+ F + K A E ++ + S G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
+ + A + G E A+++L + +G P ++ N +I+ + AG+ +A+
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ ++ + PD +TY++L+ R K DE + E G P+
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 159/379 (41%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ ++ C G L +AM +L +M +YT LIEA A L EM
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + YN+ +M SG T+ I+L S GR
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + +M KGF P+ ++ ++ G+ +A ++LE++ + ++ YN ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K ++ A++ +M G P+IVT+N+++ C++G A+ + + + +G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P + T+I L + GK K + M ++ K Y+ LV + GK A +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ G+ + F ++ + ++AI L M G +PN +LI +
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 440 AGRYMEAMSVYHHIKESGV 458
G EA+ + + + G+
Sbjct: 567 EGMAKEALELLNELCNKGL 585
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 145/310 (46%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L++ CKEG LD A+ L M + G Q + ++ ++ ++ + GR +A+ L +M+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + +NI +M G +Y LL F +++
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M +G P+ Y+ ++ +G + A E+L ++ + S YN++I
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K G+ G+A+KL +M+ + ++P+ +T++SL+ REG +A+ F + + G+
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ F +I+ L + + D M +RG K Y +L++ G + A E
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 380 VQALKSEGVL 389
+ L ++G++
Sbjct: 577 LNELCNKGLM 586
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 7/310 (2%)
Query: 189 LDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKI 248
L V G LE+ + + M G P+ + ++ + G +KA ++LE +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 249 SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN 308
D YN +I + K GE+ AL + +M V P++VT+N++++ C G +A+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFG 368
+ M ++ YPD + +I K + M RG Y VLV+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 369 QYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
+ G+ A + + + S G PN+ + + G A K+L M +G P+
Sbjct: 286 KEGRLDEAIKFLNDMPSSG--CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
+V N+LIN G A+ + + + G P+ ++Y L+ F + KK D +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 487 RMETDGCTPD 496
RM + GC PD
Sbjct: 404 RMVSRGCYPD 413
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 7/211 (3%)
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES 347
V N+ ++ R G+ + +M G PD T+I GK K E
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQ 405
+ G Y V++ + + G+ NA + + VSP++ + + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDS 217
Query: 406 GLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTY 465
G +QA++VL M P+++ +LI A AM + +++ G +PD+VTY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 466 TTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
L+ + + DE M + GC P+
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 183/425 (43%), Gaps = 29/425 (6%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS L+ C + L R +L M G S + L+ A G S A L K+M+
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 140 YCGLKPRLNLYNIXX------XXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
CG P +YNI EM+ +G+ +
Sbjct: 400 KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
SAG+ E +S I EM +GF P++ YSK++ + + A + EE++ + D +
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
Y ++D+F K G + +A K F +M++ G PN+VT+ +LI + + + A LF M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
+G P+ + +I + G+ + + FE M + +Y F QY
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY------FKQYD-- 631
Query: 374 QNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
N+E PN+ + AL + + + E+A K+L M EG EPN ++ +
Sbjct: 632 DNSER-------------PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
LI+ G+ EA V + E G L TY++L+ + + K+ D + +M +
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 492 GCTPD 496
C P+
Sbjct: 739 SCAPN 743
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 176/422 (41%), Gaps = 22/422 (5%)
Query: 80 YSQLISKCCKEGN------LDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
Y+ LI C + + LD A ++M A G L+ + + L + G+ +A
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
+ +EMI G P + Y+ EM G+ TY I++D F
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
AG +E NEM+ G PN Y+ ++ Y A E+ E + +
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 254 IYNSIIDTFGKYGELGEALKLFVKM----------------QKEGVRPNIVTWNSLIKWH 297
Y+++ID K G++ +A ++F +M RPN+VT+ +L+
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 298 CREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYG 357
C+ +A L M +G P+ ++ +I L + GK D ++ M+ G
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 358 AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQI 417
Y+ L+D + + + A + + + + I+ + + + G ++A K++Q+
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769
Query: 418 MEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
ME +G +PN+V +I+ F G+ + + + GV+P+ VTY L+ +
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829
Query: 478 FD 479
D
Sbjct: 830 LD 831
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/507 (21%), Positives = 188/507 (37%), Gaps = 90/507 (17%)
Query: 73 EELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEAD 132
+E+ EF + L+ K C+ G+ A+ L +++ F+ S +Y LI+A R A
Sbjct: 196 KEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 255
Query: 133 MLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRET-------- 184
++ +EM L R++ + + + G WR T
Sbjct: 256 LIHREMSLANL--RMDGFTLRCFAY--------------SLCKVGKWREALTLVETENFV 299
Query: 185 -----YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
Y L+ A E+ +N M+ PN YS ++ + + V
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI----- 294
L + I+NS++ + G+ A KL KM K G P V +N LI
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 295 ------------------------------------KWHCREGDYTKALNLFSDMQEQGL 318
+ C G Y KA ++ +M QG
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
PD + +++ L K + FE M G Y ++VD F + G + A +
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 379 CVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
++ G +PN+ + AL +AY + A ++ + M EG PNIV + LI+
Sbjct: 540 WFNEMREVGC--TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDL----------------VTYTTLMKAFIRTKKFDE 480
AG+ +A ++ + S PD+ VTY L+ F ++ + +E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 481 VPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ M +GC P++ L D L
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGL 684
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 181/458 (39%), Gaps = 55/458 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ ++ CK G +++A +M +G + +YT LI A + S A+ LF+ M+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV----------------DSGIWRTRE 183
G P + Y+ M D+
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY LLD F + R+E+ ++ M M+G +PN VY ++ G +A EV E+
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
E + Y+S+ID + K A K+ KM + PN+V + +I C+ G
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+A L M+E+G P+ + +I G GK +T + E M S+G Y VL
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 364 VDIFGQYGKFQNAEECVQALK------------------------SEGVL-------VSP 392
+D + G A ++ +K S G+L +P
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAP 880
Query: 393 --NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV----MLNMLINAFSNAGRYMEA 446
+++ L + + E A+++L+ E +V N LI + A + A
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLE--EVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
++ + + GV P++ ++ +L+K R K E ++
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 976
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 171/416 (41%), Gaps = 18/416 (4%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS++++ C ++ A L +M+ G Y+YT ++++ G +A F EM
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + Y M+ G TY L+D AG++E
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 200 DTWSTIN-----------EMKMKGF-----QPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
+M K + +PN Y ++ + + ++A ++L+ +
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ +Y+++ID K G+L EA ++ +M + G + T++SLI + +
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
A + S M E P+ I+ +I L + GK D K + M +G + Y +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+D FG GK + E ++ + S+GV + + L + + G + A +L+ M+
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
+ +I F+ ++E++ + I + +P L Y L+ I+ ++ +
Sbjct: 846 PTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 115/303 (37%), Gaps = 39/303 (12%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E + Y LI CK G LD A + +M GF + Y+Y+ LI+ V R A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ +M+ P + +Y M + G TY ++D
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
F G++E + M KG PN Y ++ NG A +LEE+++
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRP----------NIV------------- 288
T Y +I+ F K E E+L L ++ ++ P N++
Sbjct: 849 TAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Query: 289 --------------TWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
T+NSLI+ C A LFS+M ++G+ P+ + F ++I L
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966
Query: 335 QGK 337
K
Sbjct: 967 NSK 969
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 146/391 (37%), Gaps = 53/391 (13%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQM------EALGFQLSSY----------SYTHLIEALG 123
YS LI CK G +++A + +M + Y +Y L++
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 124 NVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRE 183
R EA L M G +P +Y+ EM + G T
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY L+D + R + +++M PN +Y++++ G +A ++++ +
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
E+ + Y ++ID FG G++ L+L +M +GV PN VT+ LI C+ G
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 304 TKALNLFSDMQEQGLYPDP------------KIFVTIISCLGEQGKWDT----------- 340
A NL +M+ Q +P K F+ + L E G+ DT
Sbjct: 831 DVAHNLLEEMK-QTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLI 889
Query: 341 ---IKKCFESMTSRGNKKYGAVYAVLVDIFGQYG----------KFQNAEECVQALKSEG 387
IK M R ++ A LVD Y K + A + + +G
Sbjct: 890 DNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
V+ FC+L + +A+ +L +
Sbjct: 950 VIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/396 (18%), Positives = 138/396 (34%), Gaps = 91/396 (22%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
++ +FV AGR G++ + VY+ +V L + K E L++IR+
Sbjct: 148 VISFFVWAGR------------QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDD 195
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWH---------- 297
+ N ++ + G AL+ +++ RP+ T+N LI+
Sbjct: 196 KEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 255
Query: 298 -------------------------CREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
C+ G + +AL L ++ + PD + +IS L
Sbjct: 256 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGL 312
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
E ++ M + Y+ L+ + + + + EG SP
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA---------------- 436
IF +L +AY G A K+L+ M G P V+ N+LI +
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 432
Query: 437 -------------------------FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+AG+Y +A SV + G PD TY+ ++
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
K + ++++ M+ G D ++ D+
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 203/468 (43%), Gaps = 37/468 (7%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
+E Y LI+ + G AM+L+ M S +Y +LI A G+ G EA + K
Sbjct: 46 AETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCK 105
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEIL-------- 188
+M G+ P L +NI M + + T+ I+
Sbjct: 106 KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 165
Query: 189 -----LDYFVS------------------------AGRLEDTWSTINEMKMKGFQPNSFV 219
LD F S G +E+ + M +G +PN
Sbjct: 166 QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 225
Query: 220 YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ 279
Y+ ++G Y +GM A VL +I++ I D Y +++++G+ + G+A ++F+ M+
Sbjct: 226 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 285
Query: 280 KEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWD 339
KE +PN+VT+N+LI + G +A+ +F M++ G+ P+ T+++ K
Sbjct: 286 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 345
Query: 340 TIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALA 399
+ + SRG A Y + + + + A Q+++ + V F L
Sbjct: 346 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+ + +AI L+ ME I + + ++ A+S G+ EA S+++ +K +G
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 465
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
PD++ YT+++ A+ ++K+ + ++ ME +G PD A L A
Sbjct: 466 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 195/475 (41%), Gaps = 41/475 (8%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
++ Y+ +I + +D+A L +M+ + + +Y LI A G G+ A L
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
+M+ + P + YN +M D+G+ T+ I+L + S
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL--DTHI 254
+ S MK +P++ ++ I+ G +A ++ +RE++ D
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
+ SI+ + GE+ +F M EG++PNIV++N+L+ + G AL++ D++
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
+ G+ PD + +++ G + K+ F M K Y L+D +G G
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 375 NAEECVQALKSEGVLVSPNIF--CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
A E + ++ +G+ PN+ C L A ++ VL + GI N N
Sbjct: 311 EAVEIFRQMEQDGI--KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE------------ 480
I ++ NA +A+++Y +++ V D VT+T L+ R K+ E
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 481 VPI-----------------------IYKRMETDGCTPDRKAKQMLQDALTALER 512
+P+ I+ +M+ GC PD A + A A E+
Sbjct: 429 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 483
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 155/366 (42%), Gaps = 38/366 (10%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY L+D + S G L + +M+ G +PN ++ + VL
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR---- 299
+ R I+L+T YNS I ++ EL +A+ L+ M+K+ V+ + VT+ LI CR
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 300 -------------------------------EGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
+G T+A ++F+ M+ G PD + ++
Sbjct: 415 PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSM 474
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
+ KW + F M + G + + L+ F + G+ N + ++ + +
Sbjct: 475 LHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ +F + +A ++AI ++Q+M+ +I + N +++ F +G+ M
Sbjct: 535 PFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMK 594
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+++ I SGV +L TY L++ + + + + + M G P + QM +D ++
Sbjct: 595 LFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQP---SNQMYRDIIS 651
Query: 509 ALERRS 514
ER +
Sbjct: 652 FGERSA 657
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%)
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
AL NA+ + G A+ ++ M I P+ N LINA ++G + EA+ V + ++
Sbjct: 51 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 110
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERRS 514
GV PDLVT+ ++ A+ +++ + ++ M+ PD ++ L+ L + S
Sbjct: 111 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 168
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 183/437 (41%), Gaps = 76/437 (17%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G +L Y+ L+ K+ ++A + M+ + Y+YT +I +G +G
Sbjct: 228 EIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIG 284
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ EA LF EMI GL + YN MV++G TY
Sbjct: 285 KCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYS 344
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG-----------MWK- 234
+LL+ V+ G+L + K Q +YS +V G MW
Sbjct: 345 LLLNLLVAEGQLVRLDGVVEISKRYMTQG---IYSYLVRTLSKLGHVSEAHRLFCDMWSF 401
Query: 235 -----------------------KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
+A E+L +I E+ + DT +YN++ GK ++
Sbjct: 402 PVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHI 461
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
LF KM+K+G P+I T+N LI R G+ +A+N+F +++ PD + ++I+C
Sbjct: 462 HDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINC 521
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
LG+ G D F+ M +G Y+ L++ FG K+E V
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG---------------KTERV--- 563
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH 451
E A + + M +G +PNIV N+L++ GR EA+ +Y
Sbjct: 564 -----------------EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYS 606
Query: 452 HIKESGVSPDLVTYTTL 468
+K+ G++PD +TYT L
Sbjct: 607 KMKQQGLTPDSITYTVL 623
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 159/362 (43%), Gaps = 37/362 (10%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEE 242
TY+ LL ++ + + E++ G + + F Y+ ++ L +D +KA +V E+
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD----EKACQVFED 260
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+++R D + Y +I T G+ G+ EA+ LF +M EG+ N+V +N+L++ +
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE-----------SMTSR 351
KA+ +FS M E G P+ + +++ L +G+ + E S R
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVR 380
Query: 352 GNKKYGAV---------------------YAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
K G V Y +++ GK A E + + +GV+
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVT 440
Query: 391 SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
++ + +A + + + M+ +G P+I N+LI +F G EA++++
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 451 HHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTAL 510
++ S PD+++Y +L+ + DE + +K M+ G PD L +
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 511 ER 512
ER
Sbjct: 561 ER 562
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 153/336 (45%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EM+ I T+ IL++ + G E + + +M+ G+ P Y+ ++ Y G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+K A E+L+ ++ + + D YN +I + + + L M+K + PN VT+N
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI EG A L ++M GL P+ F +I +G + K F M ++
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G Y VL+D + +F A +K GV V + + + + G ++A
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+ +L M +GI+P+IV + LIN F GR+ A + I G+SP+ + Y+TL+
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
R E IY+ M +G T D +L +L
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 168/417 (40%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ ++ CK+G A+ LL M++ G +Y LI L R ++ +L ++M
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P YN EM+ G+ T+ L+D +S G +
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M+ KG P+ Y ++ N + A ++ + + Y +I
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K G L EA+ L +M K+G+ P+IVT+++LI C+ G + A + + GL
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ I+ T+I G + +E+M G+ + + VLV + GK AEE
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
++ + S+G+L + F L N Y G +A V M G P L+
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G EA + + D V Y TL+ A ++ + ++ M PD
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 185/431 (42%), Gaps = 3/431 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI+ C EG+ +++ L+ +ME G+ + +Y ++ GR A L M
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ + YN+ +M I TY L++ F + G++
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+NEM G PN ++ ++ + G +K+A ++ + + ++ Y ++
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K E A +++M++ GV +T+ +I C+ G +A+ L ++M + G+
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + +I+ + G++ T K+ + G G +Y+ L+ + G + A
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+A+ EG F L + + G +A + ++ M +GI PN V + LIN + N
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
+G ++A SV+ + + G P TY +L+K + E K + P
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA---VPAAVD 652
Query: 500 KQMLQDALTAL 510
M LTA+
Sbjct: 653 TVMYNTLLTAM 663
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 174/418 (41%), Gaps = 1/418 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI+ EG + A LL +M + G + ++ LI+ + G EA +F M
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
GL P Y + M +G+ R TY ++D G L+
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +NEM G P+ YS ++ + G +K A E++ I +S + IY+++I
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ G L EA++++ M EG + T+N L+ C+ G +A M G+
Sbjct: 521 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ F +I+ G G+ F+ MT G+ Y L+ + G + AE+
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+++L + V ++ L A + G +A+ + M I P+ LI+
Sbjct: 641 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Query: 440 AGRYMEAMSVYHHIKESG-VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G+ + A+ + G V P+ V YT + + ++ ++M+ G TPD
Sbjct: 701 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/455 (19%), Positives = 182/455 (40%), Gaps = 36/455 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI+ CK G A ++ ++ +G + Y+ LI +G EA +++ MI
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G +N+ M GI +++ L++ + ++G
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+S +EM G P F Y ++ G ++A + L+ + ++DT +YN+++
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG-L 318
K G L +A+ LF +M + + P+ T+ SLI CR+G A+ + + +G +
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ ++ + + + G+W E M + G+ ++D + + GK + +
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQ------------------------------GLC 408
+ + ++ + + L + Y+++ G+C
Sbjct: 781 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 409 EQ-----AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
E +K+L+ G+E + NMLI+ G A + + G+S D
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
T ++ R +F E ++ M G +P+ +
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 935
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 132/294 (44%), Gaps = 4/294 (1%)
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
N VY ++ +Y GM + + E+ + + + N+I+ + K GE
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
+M K + P++ T+N LI C EG + K+ L M++ G P + T++ ++
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN-- 393
G++ + + M S+G Y +L+ + + ++ ++ ++ PN
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR--MIHPNEV 339
Query: 394 IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI 453
+ L N ++ +G A ++L M G+ PN V N LI+ + G + EA+ +++ +
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 454 KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ G++P V+Y L+ + +FD Y RM+ +G R + D L
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 453
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 176/450 (39%), Gaps = 37/450 (8%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L++ CK GNL +A+SL +M SY+YT LI L G+T A + KE
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 140 YCG-LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
G + P +Y +M + G T ++D + G++
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVG-------------LYR----------------- 228
E T + EM + PN Y+ ++ LYR
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 229 -----DNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
++ M + ++L+ R + +D + +N +I GE+ A L M G+
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
+ T ++++ R + ++ + +M +QG+ P+ + ++ +I+ L G T
Sbjct: 896 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 955
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
E M + + +V + GK A ++ + ++ + F L +
Sbjct: 956 VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 1015
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+ G +A+++ +M G++ ++V N+LI G A +Y +K G +
Sbjct: 1016 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1075
Query: 464 TYTTLMKAFI-RTKKFDEVPIIYKRMETDG 492
TY L++ + R F II K + G
Sbjct: 1076 TYKALIRGLLARETAFSGADIILKDLLARG 1105
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 153/395 (38%), Gaps = 1/395 (0%)
Query: 95 RAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXX 154
+A S+ +M +G + ++Y L++ L G EA+ K + +YN
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 155 XXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKG-F 213
EMV I TY L+ G+ E + +G
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 214 QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALK 273
PN +Y+ V G WK E++ + D N++ID + + G++ +
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 274 LFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLG 333
L +M + PN+ T+N L+ + + D + + L+ + G+ PD +++ +
Sbjct: 781 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 334 EQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN 393
E + K ++ RG + + +L+ G+ A + V+ + S G+ + +
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD 900
Query: 394 IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI 453
A+ + + +++ VL M +GI P LIN G A V +
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 454 KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
+ P V + +++A + K DE ++ + M
Sbjct: 961 IAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 995
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/476 (19%), Positives = 170/476 (35%), Gaps = 38/476 (7%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
R G + YS LI CC+ G L A+ + M G +++ L+ +L G+ +
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
EA+ + M G+ P ++ EM G T TY LL
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
G L + + + ++ +Y+ ++ +G KA + E+ +R I
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVK-------------------------------- 277
D++ Y S+I + G+ A+ LF K
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744
Query: 278 -----MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
M G P+IVT N++I + R G K +L +M Q P+ + ++
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
++ T + S+ G LV + + + ++A GV V
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDR 864
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
F L + G A ++++M GI + + +++ + R+ E+ V H
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 924
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+ + G+SP+ Y L+ R ++ + M P A+ + AL
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 101/258 (39%), Gaps = 35/258 (13%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E+ ++ LISKCC G ++ A L+ M +LG L + ++ L R E+
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
M+ EM G+ P Y L++
Sbjct: 919 RMVLHEMSKQGISPE-----------------------------------SRKYIGLING 943
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
G ++ + EM P + S +V G +AT +L + + K+
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+ +++ K G + EAL+L V M G++ ++V++N LI C +GD A L+
Sbjct: 1004 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1063
Query: 312 DMQEQGLYPDPKIFVTII 329
+M+ G + + +I
Sbjct: 1064 EMKGDGFLANATTYKALI 1081
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 154/323 (47%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
LLD + W E+ GF N +V++ ++ + G A +V +EI +R
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
+ +N++I+ + K G L E +L +M+K RP++ T+++LI C+E A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
LF +M ++GL P+ IF T+I G+ D +K+ ++ M S+G + +Y LV+ F
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G A V + G+ + L + + + G E A+++ + M+ GIE +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
V + L+ GR ++A + +G+ PD VTYT +M AF + + K
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 488 METDGCTPDRKAKQMLQDALTAL 510
M++DG P +L + L L
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKL 533
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 141/325 (43%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
E++D+G + IL++ F G + D +E+ + QP ++ ++ Y G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ + ++ + + D Y+++I+ K ++ A LF +M K G+ PN V +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI H R G+ + M +GL PD ++ T+++ + G + + M R
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G + Y L+D F + G + A E + + G+ + F AL ++G A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+ L+ M GI+P+ V M+++AF G + ++ G P +VTY L+
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPD 496
+ + ++ M G PD
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPD 554
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 170/406 (41%), Gaps = 38/406 (9%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G L+ ++ L++K CKEGN+ A + ++ Q + S+ LI VG E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
L +M +P + TY L++
Sbjct: 295 FRLKHQMEKSRTRPDV-----------------------------------FTYSALINA 319
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+++ +EM +G PN +++ ++ + NG E +++ + + D
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+YN++++ F K G+L A + M + G+RP+ +T+ +LI CR GD AL +
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
+M + G+ D F ++ + ++G+ ++ M G K Y +++D F + G
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
Q + ++ ++S+G + S + L N + G + A +L M G+ P+ + N
Sbjct: 500 DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
L+ R+ + Y E G+ DL +Y +++ R K
Sbjct: 560 TLLEGHH---RHANSSKRYIQKPEIGIVADLASYKSIVNELDRASK 602
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 183/409 (44%), Gaps = 51/409 (12%)
Query: 91 GNL-DRAMSLLAQ-------MEAL--GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
GNL DR M L ME L GF L+ Y + L+ G S+A +F E+
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
L+P T ++ L++ + G L++
Sbjct: 269 RSLQP-----------------------------------TVVSFNTLINGYCKVGNLDE 293
Query: 201 TWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++M+ +P+ F YS ++ L ++N M A + +E+ +R + + I+ ++I
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKM-DGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ GE+ + + KM +G++P+IV +N+L+ C+ GD A N+ M +GL
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T+I G +T + + M G + ++ LV + G+ +AE
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
++ + G+ + + +A+ ++G + K+L+ M+ +G P++V N+L+N
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR----TKKFDEVPII 484
G+ A + + GV PD +TY TL++ R +K++ + P I
Sbjct: 533 LGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 123/280 (43%)
Query: 218 FVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVK 277
F+ ++ Y D G A + R+ + + +++D K G +++
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
+ G N+ +N L+ C+EG+ + A +F ++ ++ L P F T+I+ + G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
D + M + Y+ L++ + K A + G++ + IF
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
L + +++ G + + Q M +G++P+IV+ N L+N F G + A ++ + G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 458 VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
+ PD +TYTTL+ F R + I K M+ +G DR
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 185/422 (43%), Gaps = 39/422 (9%)
Query: 54 SESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSY 113
++ D L+ PG + +S LI G L+ A+ ++M+ +
Sbjct: 173 ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDL----GMLEEAIQCFSKMKRFRVFPKTR 228
Query: 114 SYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM 173
S L+ +G+T + FK+MI G +P
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP---------------------------- 260
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
T TY I++D G +E EMK +G P++ Y+ ++ + G
Sbjct: 261 -------TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
EE+++ D YN++I+ F K+G+L L+ + +M+ G++PN+V++++L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 294 IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN 353
+ C+EG +A+ + DM+ GL P+ + ++I + G + M G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 354 KKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIK 413
+ Y L+D + + AEE + + GV+ + + AL + + + ++A++
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 414 VLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
+L ++G GI+P++++ I + + A V + +KE G+ + + YTTLM A+
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 474 RT 475
++
Sbjct: 554 KS 555
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 188/450 (41%), Gaps = 6/450 (1%)
Query: 21 ALRCSSHATAIQFSKIPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFY 80
A++C S +F P + + + L R + D K + G + Y
Sbjct: 211 AIQCFSKMK--RFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF---KDMIGAGARPTVFTY 265
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ +I CKEG+++ A L +M+ G + +Y +I+ G VGR + F+EM
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
+P + YN EM +G+ +Y L+D F G ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+M+ G PN + Y+ ++ G A + E+ + + + Y ++ID
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+ EA +LF KM GV PN+ ++N+LI + + +AL L ++++ +G+ P
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D ++ T I L K + K M G K +Y L+D + + G +
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL-QIMEGEGIEPNIVMLNMLINAFSN 439
+K + V+ FC L + + L +A+ +I G++ N + +I+
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+ A +++ + + G+ PD YT+LM
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 19/341 (5%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF-------------- 218
M +G + E+Y I+ A D S + EM + + F
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 219 -VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVK 277
V+ + + D GM ++A + +++ ++ T N ++ F K G+ + + F
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
M G RP + T+N +I C+EGD A LF +M+ +GL PD + ++I G+ G+
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--F 395
D FE M + Y L++ F ++GK E + +K G + PN+ +
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG--LKPNVVSY 370
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
L +A+ ++G+ +QAIK M G+ PN LI+A G +A + + + +
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
GV ++VTYT L+ ++ E ++ +M+T G P+
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 140/319 (43%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
LL F G+ +D +M G +P F Y+ ++ G + A + EE++ R
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
+ DT YNS+ID FGK G L + + F +M+ P+++T+N+LI C+ G L
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+ +M+ GL P+ + T++ ++G K + M G Y L+D
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G +A + GV + + AL + ++A ++ M+ G+ PN+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
N LI+ F A A+ + + +K G+ PDL+ Y T + +K + ++
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 488 METDGCTPDRKAKQMLQDA 506
M+ G + L DA
Sbjct: 533 MKECGIKANSLIYTTLMDA 551
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 163/375 (43%), Gaps = 1/375 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS L+ CKEG + +A+ M +G + Y+YT LI+A +G S+A L EM+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++ + Y +M +G+ +Y L+ FV A ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+NE+K +G +P+ +Y + + A V+ E++E I ++ IY +++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ-GL 318
D + K G E L L +M++ + +VT+ LI C+ +KA++ F+ + GL
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
+ IF +I L + + + FE M +G Y L+D + G A
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ G+ + + +L + ++A L+ M GEGI P+ V+ ++
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 439 NAGRYMEAMSVYHHI 453
G EA+ + ++
Sbjct: 730 ELGCIDEAVELQSYL 744
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 119/320 (37%), Gaps = 54/320 (16%)
Query: 202 WSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH-------- 253
WS M GF+ + Y + + M+ A VL+E+ K D
Sbjct: 131 WS----MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRN 186
Query: 254 -------IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+++++ G L EA++ F KM++ V P + N L+ + G
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
F DM G P + +I C+ ++G + + FE M RG Y ++D
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
FG+ G+ + + + M+ EP+
Sbjct: 307 FGKVGRL-----------------------------------DDTVCFFEEMKDMCCEPD 331
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
++ N LIN F G+ + Y +K +G+ P++V+Y+TL+ AF + + Y
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 487 RMETDGCTPDRKAKQMLQDA 506
M G P+ L DA
Sbjct: 392 DMRRVGLVPNEYTYTSLIDA 411
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 187/406 (46%), Gaps = 7/406 (1%)
Query: 65 NPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGN 124
+P PR L+S F + LI K G L+ A +L ++M G + + ++ +I G
Sbjct: 298 SPRKPR----LTSTF-NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGT 352
Query: 125 VGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRET 184
G SEA+ L K+M G+ P YNI ++ G++ T
Sbjct: 353 HGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVT 412
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
+ +L + + + I EM + + I+ +Y + G+ +A + E +
Sbjct: 413 HRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ 472
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFV-KMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ L + ++ID + + G EA +F K G R +++ +N +IK + + +
Sbjct: 473 LDCV-LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLH 531
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
KAL+LF M+ QG +PD + ++ L D ++ M G K YA +
Sbjct: 532 EKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ + + G +A + +A++ GV + ++ +L N +A+ G+ E+AI+ ++ME G+
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+ N ++L LI A+S G EA VY +K+S PD+ +++
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 171/443 (38%), Gaps = 35/443 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I K ++A+SL M+ G +Y L + L V EA + EM+
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G KP Y M +G+ Y L++ F +G +E
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M+ G Q N V + ++ Y G ++A V +++++ + D NS++
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
G + EA +F ++++G +++++ +++ + G +A+ + +M+E GL
Sbjct: 698 SLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL 756
Query: 320 PDPKIFVTIISCLGEQGK--------------------WDTIKKCFESM----------- 348
D F +++C G+ W T K F +
Sbjct: 757 SDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Query: 349 ---TSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQ 405
T+ K A A+ +F G + A E Q L S + + A+ Y+
Sbjct: 817 QLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSAS 876
Query: 406 GLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTY 465
G + A+K M+ +G+EP+IV L+ + AG V+ + + P +
Sbjct: 877 GDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLF 936
Query: 466 TTLMKAFIRTKKFDEVPIIYKRM 488
+ A++ + D ++ K M
Sbjct: 937 KAVRDAYVSANRQDLADVVKKEM 959
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
T +N++ID +GK G L +A LF +M K GV + VT+N++I G ++A +L
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
M+E+G+ PD K + ++S + G + + + + G + ++ I Q
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
E + + + + + + Y +GL QA + + + + + + L
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT-LA 483
Query: 432 MLINAFSNAGRYMEAMSVYHHIKE-SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
+I+ ++ G ++EA +V++ + SG D++ Y ++KA+ + K ++ ++K M+
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 491 DGCTPD 496
G PD
Sbjct: 544 QGTWPD 549
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 151/383 (39%), Gaps = 4/383 (1%)
Query: 115 YTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV 174
Y +I+A G +A LFK M G P YN EM+
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
DSG +TY ++ +V G L D M+ G +PN VY ++ + ++GM +
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
+A + + E + + + S+I + K G L EA +++ KM+ P++ NS++
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
G ++A ++F+ ++E+G D F T++ G D + E M G
Sbjct: 698 SLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL 756
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSE-GVLVSPNIFCALANAYAQQGLCEQAIK 413
+ ++ + G+ E + E +L+ F L + G+ +A+
Sbjct: 757 SDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Query: 414 VLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
LQ E +P + + FS G Y A+ + + + Y ++ +
Sbjct: 817 QLQTAYNEA-KP-LATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYS 874
Query: 474 RTKKFDEVPIIYKRMETDGCTPD 496
+ D Y RM+ G PD
Sbjct: 875 ASGDIDMALKAYMRMQEKGLEPD 897
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 127/309 (41%), Gaps = 20/309 (6%)
Query: 211 KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE 270
+ + PN Y+ ++ G W + E+ + + Y ++D +GK G + E
Sbjct: 139 QSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKE 198
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF---------------SDMQE 315
AL M + P+ VT ++++ G++ +A F D +
Sbjct: 199 ALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPK 258
Query: 316 QGLYPDPKIFVTIISC-LGEQGKWDTIKKCFE----SMTSRGNKKYGAVYAVLVDIFGQY 370
G P +S L + G + I+K S +S + + + L+D++G+
Sbjct: 259 NGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKA 318
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
G+ +A + GV + F + + G +A +L+ ME +GI P+
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTY 378
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
N+L++ ++AG A+ Y I++ G+ PD VT+ ++ + K EV + M+
Sbjct: 379 NILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDR 438
Query: 491 DGCTPDRKA 499
+ D +
Sbjct: 439 NSIRIDEHS 447
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 184/463 (39%), Gaps = 43/463 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI C+ G LD A+S L +M G +LS Y Y LI G S A+ EMI
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
L+P + Y EM GI + T+ LL AG +
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D NEM +PN Y+ ++ Y + G KA E L+E+ E+ I DT+ Y +I
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 260 DTFGKYGELGEALKLFVK-MQKEGVRPNIVTWNSLIKWHCREGDYTKALN---------- 308
G+ EA K+FV + K N + + L+ CREG +AL+
Sbjct: 585 HGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 309 -------------------------LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
L +M ++GL PD I+ ++I + G +
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF---CALAN 400
++ M + G Y +++ + G AE V K + V PN C L
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE--VLCSKMQPVSSVPNQVTYGCFLDI 761
Query: 401 AYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSP 460
+ ++A+++ + +G+ N NMLI F GR EA + + GVSP
Sbjct: 762 LTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 461 DLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
D +TYTT++ R + ++ M G PDR A L
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 172/427 (40%), Gaps = 35/427 (8%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y L+ CK + + ++ +M L F S + + L+E L G+ EA L K ++
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P L +YN L+D +
Sbjct: 360 DFGVSPNLFVYNA-----------------------------------LIDSLCKGRKFH 384
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + M G +PN YS ++ ++ G A L E+ + + L + YNS+I
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ K+G++ A +M + + P +VT+ SL+ +C +G KAL L+ +M +G+
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P F T++S L G K F M K Y V+++ + + G A E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
++ + +G++ + L + G +A + + E N + L++ F
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
G+ EA+SV + + GV DLV Y L+ ++ K + K M G PD
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 500 KQMLQDA 506
+ DA
Sbjct: 685 YTSMIDA 691
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 163/416 (39%), Gaps = 6/416 (1%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S L+ K + AM L M ++G + Y YT +I +L + S A + M
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G + YN+ ++ + TY L+ E
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
++EM F P+ S +V R G ++A +++ + + +S + +YN++ID
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+ K + EA LF +M K G+RPN VT++ LI CR G AL+ +M + GL
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY---GKFQNAE 377
+ ++I+ K+ I M NKK + G Y GK A
Sbjct: 436 SVYPYNSLIN---GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ +G+ S F L + + GL A+K+ M ++PN V N++I +
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
G +A + E G+ PD +Y L+ T + E + + C
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 170/418 (40%), Gaps = 37/418 (8%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ C +G +++A+ L +M G S Y++T L+ L G +A LF EM
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETY-------------- 185
+KP YN+ EM + GI +Y
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 186 -----------------EI----LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV 224
EI LL F G+LE+ S EM +G + Y ++
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 225 GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
+ K +L+E+ +R + D IY S+ID K G+ EA ++ M EG
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
PN VT+ ++I C+ G +A L S MQ P+ + + L +G+ D K
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAV 773
Query: 345 -FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
+ +G A Y +L+ F + G+ + A E + + +GV + + N
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPD 461
++ ++AI++ M +GI P+ V N LI+ AG +A + + + G+ P+
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 149/365 (40%), Gaps = 37/365 (10%)
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
LF +M+ G++P + +Y M +G Y +L+D
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDT 252
++ + ++ K +P+ Y +V GL + ++ E+++E+ + S
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE-FEIGLEMMDEMLCLRFSPSE 332
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
+S+++ K G++ EAL L ++ GV PN+ +N+LI C+ + +A LF
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
M + GL P+ Y++L+D+F + GK
Sbjct: 393 MGKIGLRPND-----------------------------------VTYSILIDMFCRRGK 417
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
A + + G+ +S + +L N + + G A + M + +EP +V
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
L+ + + G+ +A+ +YH + G++P + T+TTL+ R + ++ M
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 493 CTPDR 497
P+R
Sbjct: 538 VKPNR 542
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 45/297 (15%)
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
EL+ Y+ L+ C+EG L+ A+S+ +M G L Y LI+ G D
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID-----GSLKHKDR 663
Query: 134 -----LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEIL 188
L KEM GLKP +Y M++ G TY +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 189 LDYFVSAGRLEDTWSTINEMK-----------------------------------MKGF 213
++ AG + + ++M+ +KG
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 214 QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALK 273
N+ Y+ ++ + G ++A+E++ + +S D Y ++I+ + ++ +A++
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 274 LFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
L+ M ++G+RP+ V +N+LI C G+ KA L ++M QGL P+ K T S
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 97/228 (42%)
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
+ K + P + T ++L+ + + A+ LF+DM G+ PD I+ +I L E
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
K+ M + G Y VL+D + K A + L + + +C
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
L + E ++++ M P+ ++ L+ G+ EA+++ + + G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 458 VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
VSP+L Y L+ + + +KF E +++ RM G P+ +L D
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 197/472 (41%), Gaps = 39/472 (8%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E + Y+ L+ K G A+S+L +ME S +Y L+ A G + EA
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ + M G+ P Y M ++G TY +L
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
R + + +MK G PN ++ ++ L + GM K V E++ D
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+N++I +G+ G +A K++ +M + G + T+N+L+ R+GD+ N+ S
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIK--------------------------KC- 344
DM+ +G P + ++ C + G + I+ KC
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 345 --------FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI-- 394
F G K ++ ++ IF + + AE +++++ +G+ SP++
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGL--SPDLVT 668
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
+ +L + Y ++G C +A ++L+ +E ++P++V N +I F G EA+ + +
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDA 506
E G+ P + TY T + + F E+ + + M + C P+ +M+ D
Sbjct: 729 ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG 780
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 192/462 (41%), Gaps = 36/462 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM-LFKEM 138
Y+ ++ + G ++A+ L +M+ +G + +Y +++ G +GR+ + + EM
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
GLK + E+ G TY LL F AG
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ S + EM+ +S Y+++V Y G K+A V+E + ++ + + Y ++
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
ID +GK G+ EALKLF M++ G PN T+N+++ ++ + + + DM+ G
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + T+++ G +G + + F M S G + + L+ +G+ G +A +
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ G + AL NA A++G V+ M+ +G +P ++++ ++
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 439 NAGRYMEAMSVYHHIKES-----------------------------------GVSPDLV 463
G Y+ + + IKE G PD+V
Sbjct: 573 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 632
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
+ +++ F R +D+ I + + DG +PD L D
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 174/408 (42%), Gaps = 1/408 (0%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
+E A LL ++ + L +YT ++ A G+ +A LF+ M G P L
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 149 LYNIXXXXXXXXXXX-XXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINE 207
YN+ EM G+ T +L G L + E
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
+K G++P + Y+ ++ ++ G++ +A VL+E+ E D+ YN ++ + + G
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
EA + M K+GV PN +T+ ++I + + G +AL LF M+E G P+ +
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
++S LG++ + + + K M S G A + ++ + G G + + +KS G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
+ F L +AY + G A K+ M G + N L+NA + G +
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
+V +K G P +Y+ +++ + + + + I R++ P
Sbjct: 547 NVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 180/427 (42%), Gaps = 42/427 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ ++S K+ + + +L M++ G + ++ ++ GN G + +F+EM
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK 483
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
CG +P + +N EM +G TY LL+ G
Sbjct: 484 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWR 543
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ I++MK KGF+P YS ++ Y G + + I+E +I + +++
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
K L + + F +K G +P++V +NS++ R Y +A + ++E GL
Sbjct: 604 LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLS 663
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD VT Y L+D++ + G+ AEE
Sbjct: 664 PD---LVT--------------------------------YNSLMDMYVRRGECWKAEEI 688
Query: 380 VQALKSEGV---LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
++ L+ + LVS N + + ++GL ++A+++L M GI P I N ++
Sbjct: 689 LKTLEKSQLKPDLVSYN---TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET-DGCTP 495
++ G + E V + ++ P+ +T+ ++ + R K+ E +++T D C
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFD 805
Query: 496 DRKAKQM 502
D+ +++
Sbjct: 806 DQSIQRL 812
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 5/273 (1%)
Query: 229 DNGMWKKATEVLEEI----RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
D+G W++A + E + + LD + + G+ + A KL K+ +
Sbjct: 148 DSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYL 207
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK-WDTIKK 343
++ + +++ + R G Y KA++LF M+E G P + I+ G+ G+ W I
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
+ M S+G K + ++ + G + A+E LKS G + AL +
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+ G+ +A+ VL+ ME + V N L+ A+ AG EA V + + GV P+ +
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
TYTT++ A+ + K DE ++ M+ GC P+
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 192/429 (44%), Gaps = 4/429 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI+ C EG + A +L+ +M G + +Y ++ + +G T A L +M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+KP + +Y+ EM++ GI TY ++D F S GR
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + +M + P+ ++ ++ G +A ++ +E+ R I DT YNS+I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K+ +A +F M P++VT+N++I +CR + + L ++ +GL
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
+ + T+I E + + F+ M S G +L+ F + K + A E
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ ++ + + + + + + ++A + + G+EP++ N++I+ F
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
+A ++H +K++G PD TY TL++ ++ + D+ + M ++G + D
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Query: 500 KQMLQDALT 508
+M+ D +T
Sbjct: 645 IKMVADLIT 653
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 188/437 (43%), Gaps = 31/437 (7%)
Query: 49 NKVVN-----SESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQM 103
NKV+ + D +L+ E R + S ++ LI C L ++S ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS--FNILIKCFCDCHKLSFSLSTFGKL 167
Query: 104 EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXX 163
LGFQ ++ L+ L R SEA LF M+ G + L++
Sbjct: 168 TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFD------------ 215
Query: 164 XXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKI 223
+MV+ G+ T+ L++ GR+ + + +N+M KG + Y I
Sbjct: 216 --------QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 224 VGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
V G K A +L ++ E I D IY++IID K G +A LF +M ++G+
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
PN+ T+N +I C G ++ A L DM E+ + PD F +IS ++GK +K
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
+ M R Y ++ F ++ +F +A+ + S V+ F + + Y
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYC 443
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+ ++ +++L+ + G+ N N LI+ F A ++ + GV PD +
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 464 TYTTLMKAFIRTKKFDE 480
T L+ F +K +E
Sbjct: 504 TCNILLYGFCENEKLEE 520
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 171/408 (41%), Gaps = 4/408 (0%)
Query: 96 AMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXX 155
A++L QM +G ++ LI L GR EA L +M+ GL + Y
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 156 XXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQP 215
+M ++ I Y ++D G D +EM KG P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
N F Y+ ++ + G W A +L ++ ER+I+ D +N++I K G+L EA KL
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
+M + P+ VT+NS+I C+ + A ++F M PD F TII
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 445
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
+ D + ++ RG Y L+ F + A++ Q + S GV
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
L + + E+A+++ ++++ I+ + V N++I+ + EA ++ +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
GV PD+ TY ++ F + +++ +M+ +G PD L
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 140/322 (43%), Gaps = 50/322 (15%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGM---------- 232
++ IL+ F +L + ST ++ GFQP+ ++ ++ GL ++ +
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 233 ----WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIV 288
+ +A + +++ E ++ +N++I+ G + EA L KM +G+ ++V
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 289 TWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESM 348
T+ +++ C+ GD ALNL S M+E + PD I+ II L + G + F M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 349 TSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC 408
+G Y ++D F +G++ +A+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQ------------------------------- 351
Query: 409 EQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
++L+ M I P+++ N LI+A G+ EA + + + PD VTY ++
Sbjct: 352 ----RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 469 MKAFIRTKKFDEVPIIYKRMET 490
+ F + +FD+ ++ M +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS 429
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 64/153 (41%)
Query: 88 CKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRL 147
C+ L+ A+ L ++ L + +Y +I + + EA LF + G++P +
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 148 NLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINE 207
YN+ +M D+G TY L+ + AG ++ + I+E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
M+ GF ++F + L D + K +++L
Sbjct: 633 MRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 665
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 157/373 (42%), Gaps = 35/373 (9%)
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
++ MI GL P +++Y + EM GI Y I +
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHI 254
++E+ MK G PN + YS ++ Y G ++A + +EI ++ + +
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
+ +++D F K EL A LFV M K GV PN+ +N LI HC+ G+ +A+ L S+M+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
L PD + +I+ L C E + N+ +
Sbjct: 367 SLNLSPDVFTYTILINGL-----------CIEDQVAEANRLF------------------ 397
Query: 375 NAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
Q +K+E + S + +L + Y ++ EQA+ + M G+EPNI+ + LI
Sbjct: 398 ------QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCT 494
+ + N AM +Y + G+ PD+VTYT L+ A + E +Y M G
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 495 PDRKAKQMLQDAL 507
P+ L D
Sbjct: 512 PNDHTFACLVDGF 524
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 6/322 (1%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
+L+ V R + W M +G P+ +Y + G++ K ++L+E+
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
I + +IY I + ++ EA K+F M+K GV PN+ T++++I +C+ G+ +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
L+ ++ L P+ +F T++ + + T + F M G VY L+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 368 GQYGKFQNAEECVQALKS-EGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ G N E V L E + +SP++F L N + +A ++ Q M+ E I
Sbjct: 350 CKSG---NMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF 406
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
P+ N LI+ + +A+ + + SGV P+++T++TL+ + + +
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 485 YKRMETDGCTPDRKAKQMLQDA 506
Y M G PD L DA
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDA 488
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 162/393 (41%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ I C++ ++ A + M+ G + Y+Y+ +I+ G +A L+KE++
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
L P + ++ MV G+ Y L+ +G +
Sbjct: 297 VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML 356
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++EM+ P+ F Y+ ++ +A + ++++ +I + YNS+I
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ K + +AL L +M GV PNI+T+++LI +C D A+ L+ +M +G+
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + +I ++ + + M G +A LVD F + G+ A +
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
Q + + F L Q G +A + M GI P+I ++
Sbjct: 537 YQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQ 596
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
R + M + + ++G+ P+L+ L + +
Sbjct: 597 EKRITDTMMLQCDMIKTGILPNLLVNQLLARFY 629
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 161/369 (43%), Gaps = 5/369 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS +I CK GN+ +A L ++ + + L++ A LF M+
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P L +YN EM + TY IL++ ++
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +MK + P+S Y+ ++ Y ++A ++ E+ + + ++++I
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D + ++ A+ L+ +M +G+ P++VT+ +LI H +E + +AL L+SDM E G++
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ F ++ ++G+ ++ + + + L++ Q G A
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 380 VQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
++S G ++P+I + ++ + Q+ + + M GI PN+ ++N L+ F
Sbjct: 572 FSDMRSCG--ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL-LVNQLLARF 628
Query: 438 SNAGRYMEA 446
A Y+++
Sbjct: 629 YQANGYVKS 637
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%)
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
+E PD K ++I++ L + ++D++ ++ M SRG +Y VL + G +
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
E+ + + S G+ + I+ + E+A K+ ++M+ G+ PN+ + +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
I+ + G +A +Y I + + P++V + TL+ F + ++ ++ M G
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Query: 494 TPD 496
P+
Sbjct: 336 DPN 338
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 188/437 (43%), Gaps = 31/437 (7%)
Query: 49 NKVVN-----SESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQM 103
NKV+ + D +L+ E R + S ++ LI C L ++S ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS--FNILIKCFCDCHKLSFSLSTFGKL 167
Query: 104 EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXX 163
LGFQ ++ L+ L R SEA LF M+ G + L++
Sbjct: 168 TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFD------------ 215
Query: 164 XXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKI 223
+MV+ G+ T+ L++ GR+ + + +N+M KG + Y I
Sbjct: 216 --------QMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 224 VGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
V G K A +L ++ E I D IY++IID K G +A LF +M ++G+
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
PN+ T+N +I C G ++ A L DM E+ + PD F +IS ++GK +K
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
+ M R Y ++ F ++ +F +A+ + S V+ F + + Y
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYC 443
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+ ++ +++L+ + G+ N N LI+ F A ++ + GV PD +
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 464 TYTTLMKAFIRTKKFDE 480
T L+ F +K +E
Sbjct: 504 TCNILLYGFCENEKLEE 520
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 191/428 (44%), Gaps = 4/428 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI+ C EG + A +L+ +M G + +Y ++ + +G T A L +M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+KP + +Y+ EM++ GI TY ++D F S GR
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + +M + P+ ++ ++ G +A ++ +E+ R I DT YNS+I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K+ +A +F M P++VT+N++I +CR + + L ++ +GL
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
+ + T+I E + + F+ M S G +L+ F + K + A E
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ ++ + + + + + + ++A + + G+EP++ N++I+ F
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
+A ++H +K++G PD TY TL++ ++ + D+ + M ++G + D
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Query: 500 KQMLQDAL 507
+M ++ +
Sbjct: 645 IKMAEEII 652
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 171/408 (41%), Gaps = 4/408 (0%)
Query: 96 AMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXX 155
A++L QM +G ++ LI L GR EA L +M+ GL + Y
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 156 XXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQP 215
+M ++ I Y ++D G D +EM KG P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
N F Y+ ++ + G W A +L ++ ER+I+ D +N++I K G+L EA KL
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
+M + P+ VT+NS+I C+ + A ++F M PD F TII
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 445
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
+ D + ++ RG Y L+ F + A++ Q + S GV
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
L + + E+A+++ ++++ I+ + V N++I+ + EA ++ +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
GV PD+ TY ++ F + +++ +M+ +G PD L
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 140/322 (43%), Gaps = 50/322 (15%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGM---------- 232
++ IL+ F +L + ST ++ GFQP+ ++ ++ GL ++ +
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 233 ----WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIV 288
+ +A + +++ E ++ +N++I+ G + EA L KM +G+ ++V
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 289 TWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESM 348
T+ +++ C+ GD ALNL S M+E + PD I+ II L + G + F M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 349 TSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC 408
+G Y ++D F +G++ +A+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQ------------------------------- 351
Query: 409 EQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
++L+ M I P+++ N LI+A G+ EA + + + PD VTY ++
Sbjct: 352 ----RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 469 MKAFIRTKKFDEVPIIYKRMET 490
+ F + +FD+ ++ M +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS 429
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 88/223 (39%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ +I C+ +D M LL ++ G ++ +Y LI V + A LF+EMI
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P NI + S I Y I++ +++
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ W + + G +P+ Y+ ++ + A + ++++ D YN++I
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
K GE+ ++++L +M+ G + T + CR D
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 167/369 (45%), Gaps = 51/369 (13%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
T T+E+++ G+++ + +MK++GF + ++ ++ +YR G+ ++A E+
Sbjct: 74 HTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEM 133
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
I+E IYN ++DT + ++ M+++G PN+ T+N L+K C+
Sbjct: 134 FYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQG---KWDTIKKCFESMTSRGNKKY 356
A L +M +G PD + T+IS + E G + + + FE + S
Sbjct: 194 NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVS------ 247
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKV 414
VY L++ + ++ A E ++ + +G +SPN+ + L N G E A
Sbjct: 248 --VYNALINGLCKEHDYKGAFELMREMVEKG--ISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 415 L------------------------------------QIMEGEGIEPNIVMLNMLINAFS 438
L Q++ G G++PN+V N L+ F
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
+ G ++A+SV+ H++E G SP++ TY +L+ F + D I+ +M T GC P+
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 499 AKQMLQDAL 507
+ +AL
Sbjct: 424 VYTNMVEAL 432
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 125/513 (24%), Positives = 212/513 (41%), Gaps = 55/513 (10%)
Query: 1 MDMQSVFCSNQ-----ISLSRNHGGALRCSSHATAIQFSKIPNSLNSSNLWIRNKVVNS- 54
M +Q CS IS+ R G A R F +I ++ I N V+++
Sbjct: 102 MKLQGFHCSEDLFISVISVYRQVGLAERAVE-----MFYRIKEFGCDPSVKIYNHVLDTL 156
Query: 55 --ESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSS 112
E+ + + R G E + Y+ L+ CK +D A LL +M G +
Sbjct: 157 LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDA 216
Query: 113 YSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXE 172
SYT +I ++ VG E L + +P +++YN E
Sbjct: 217 VSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAFELMRE 271
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
MV+ GI +Y L++ ++G++E +S + +M +G PN + S +V G
Sbjct: 272 MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV-----KGC 326
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE-GVRPNIVTWN 291
+ + T TF +AL L+ +M + G++PN+V +N
Sbjct: 327 FLRGT-----------------------TF-------DALDLWNQMIRGFGLQPNVVAYN 356
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+L++ C G+ KA+++FS M+E G P+ + + ++I+ ++G D + M +
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G VY +V+ ++ KF+ AE ++ + E S F A G + A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 412 IKVLQIMEGEG-IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
KV + ME + PNIV N L++ + A R EA + I GV TY TL+
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
+ +M DG +PD M+
Sbjct: 537 GSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 170/419 (40%), Gaps = 45/419 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ +I K +G +D LL QM+ GF S + +I VG A +F +
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + +YN +LD + R++
Sbjct: 139 EFGCDPSVKIYN-----------------------------------HVLDTLLGENRIQ 163
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +MK GF+PN F Y+ ++ N A ++L E+ + D Y ++I
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + G + E +L E P + +N+LI C+E DY A L +M E+G+
Sbjct: 224 SSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD-IFGQYGKFQNAEE 378
P+ + T+I+ L G+ + M RG + LV F + F +
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 379 CVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
Q ++ G + PN+ + L + G +A+ V ME G PNI LIN
Sbjct: 339 WNQMIRGFG--LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
F+ G A+ +++ + SG P++V YT +++A R KF E + + M + C P
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 149/365 (40%), Gaps = 10/365 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI+ C G ++ A S L QM G + Y+ + L++ G T +A L+ +MI
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 140 Y-CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
GL+P + YN M + G TY L++ F G L
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ N+M G PN VY+ +V + +K+A ++E + + + +N+
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 463
Query: 259 IDTFGKYGELGEALKLFVKM-QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
I G L A K+F +M Q+ PNIVT+N L+ + +A L ++ +G
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
+ + T++ G + M G +++ + + GK + A
Sbjct: 524 VEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAA 583
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLC-----EQAIKVLQIMEGEGIEPNIVMLNM 432
+ + + P++ ++ GLC E + +L+ M GI P+I ++
Sbjct: 584 QMLDLVSCGRRKWRPDV---ISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSV 640
Query: 433 LINAF 437
LIN F
Sbjct: 641 LINCF 645
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 1/185 (0%)
Query: 306 ALNLFSDMQEQGLYPD-PKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
AL+ F + L+ P F +I L G+ D+++ + M +G ++ ++
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
++ Q G + A E +K G S I+ + + + + V + M+ +G E
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
PN+ N+L+ A + A + + G PD V+YTT++ + E +
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 485 YKRME 489
+R E
Sbjct: 239 AERFE 243
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 196/433 (45%), Gaps = 3/433 (0%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
++L++ + G A S+ + G + S +YT L+ AL L ++
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
GLKP L+N +M +SG T T+ L+ + G+LE+
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 201 TWSTINEM-KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++ M + + QPN + +V + + ++A ++ +++ + D +N++
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 260 DTFGKYGELGEALKLFV-KMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ + G A + + +M V+PN+ T +++ +C EG +AL F M+E G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
+P+ +F ++I D + + + M G K ++ L++ + G + EE
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ G+ + F LA YA+ G E+A ++L M G+ PN+V+ +I+ +
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 439 NAGRYMEAMSVYHHI-KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
+AG +AM VY + G+SP+L TY TL+ F K+ + + K ME P R
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTR 742
Query: 498 KAKQMLQDALTAL 510
K Q++ D ++
Sbjct: 743 KTMQLIADGWKSI 755
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 180/416 (43%), Gaps = 1/416 (0%)
Query: 92 NLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYN 151
N+ +A+ ++ +E G Q ++Y LI + R +A + M P YN
Sbjct: 139 NIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 152 IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK 211
I +++ T TY IL++ + G +++ ++EM +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
G +P+ F Y+ I+ GM +A E++ + + D YN ++ G+ E
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
KL KM E PN+VT++ LI CR+G +A+NL M+E+GL PD + +I+
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
+G+ D + E+M S G Y ++ + GK A E L G +
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH 451
+ + + +A G +A+ ++ M GI+P+ + N +I+ G EA +
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 452 HIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
++ P +VTY ++ F + + ++ + + M +GC P+ +L + +
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 176/393 (44%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI+ CK +D A +L +M + F + +Y +I +L + G+ A + +++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+P + Y I EM+ G+ TY ++ G ++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + +++KG +P+ Y+ ++ + G W++ +++ ++ K + Y+ +I
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
T + G++ EA+ L M+++G+ P+ +++ LI CREG A+ M G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T+++ L + GK D + F + G + Y + G A
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ + S G+ + ++ + ++G+ ++A ++L M P++V N+++ F
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
A R +A++V + +G P+ TYT L++
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 160/374 (42%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I C G LD A+ +L Q+ + Q + +YT LIEA G EA L EM+
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
GLKP + YN + G +Y ILL ++ G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + +M + PN YS ++ +G ++A +L+ ++E+ ++ D + Y+ +I
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F + G L A++ M +G P+IV +N+++ C+ G +AL +F + E G
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + T+ S L G M S G Y ++ + G A E
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ ++S S + + + + E AI VL+ M G G PN +LI
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555
Query: 440 AGRYMEAMSVYHHI 453
AG EAM + + +
Sbjct: 556 AGYRAEAMELANDL 569
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 158/327 (48%), Gaps = 3/327 (0%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY L+D R+++ ++EM+ +G P+ +Y+ ++ G + T++++ +
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ + YN++I G+L +A+ L +M PN VT+ +LI ++
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
T A+ L S M+E+G + + I+ +IS L ++GK + + M +G K VY+VL
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
VD + GK A+E + + + G L + + +L + + GLCE+A++V + M+ G
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
N ++LI+ GR EAM V+ + G+ PD V Y++++K D
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 484 IYKRM---ETDGCTPDRKAKQMLQDAL 507
+Y M E PD +L D L
Sbjct: 524 LYHEMLCQEEPKSQPDVVTYNILLDGL 550
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 162/337 (48%), Gaps = 4/337 (1%)
Query: 180 RTRETYEILLDYFVSAGR----LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK 235
R+ +++ +L+ ++ G LE +N PN ++ ++ +
Sbjct: 146 RSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDR 205
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
A EV + ERK D + Y +++D K + EA+ L +MQ EG P+ V +N LI
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
C++GD T+ L +M +G P+ + T+I L +GK D E M S
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
Y L++ + + +A + +++ G ++ +I+ L + ++G E+A+ +
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
+ M +G +PNIV+ ++L++ G+ EA + + + SG P+ TY++LMK F +T
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKT 445
Query: 476 KKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+E ++K M+ GC+ ++ +L D L + R
Sbjct: 446 GLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 164/425 (38%), Gaps = 48/425 (11%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ +I CK +DRA+ + M Y+Y L++ L R EA +L EM
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P +YN+ M G TY L+ G+L+
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK-----ATEVLEEIRERKISLDTHI 254
S + M PN Y ++ NG+ K+ A +L + ER L+ HI
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLI-----NGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
Y+ +I K G+ EA+ L+ KM ++G +PNIV ++ L+ CREG +A + + M
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
G P+ + +++ + G + + ++ M G + Y+VL+D G+ +
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 375 NAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
+A+ V M GI+P+ V + +I
Sbjct: 485 -----------------------------------EAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 435 NAFSNAGRYMEAMSVYHHI---KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
G A+ +YH + +E PD+VTY L+ K + M
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Query: 492 GCTPD 496
GC PD
Sbjct: 570 GCDPD 574
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 3/259 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y LI+ K+ A+ LL+ ME G+ L+ + Y+ LI L G+ EA L+++M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G KP + +Y++ M+ SG TY L+ F G E
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ EM G N F YS ++ G K+A V ++ I DT Y+SII
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 260 DTFGKYGELGEALKLFVKM---QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
G + ALKL+ +M ++ +P++VT+N L+ C + D ++A++L + M ++
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Query: 317 GLYPDPKIFVTIISCLGEQ 335
G PD T ++ L E+
Sbjct: 570 GCDPDVITCNTFLNTLSEK 588
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 145/364 (39%), Gaps = 34/364 (9%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLF 135
S Y+ LI CK+G+L R L+ M G + +Y LI L G+ +A L
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 136 KEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
+ M+ P Y M + G + Y +L+
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHI 254
G+ E+ S +M KG +PN VYS +V GL R+ G +A E+L + + +
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE-GKPNEAKEILNRMIASGCLPNAYT 434
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
Y+S++ F K G EA++++ +M K G N ++ LI C G +A+ ++S M
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
G+ PD + +II L G D K + M
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML------------------------- 529
Query: 375 NAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
C + KS+ +V+ NI L + Q +A+ +L M G +P+++ N +
Sbjct: 530 ----CQEEPKSQPDVVTYNI---LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFL 582
Query: 435 NAFS 438
N S
Sbjct: 583 NTLS 586
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 41/207 (19%)
Query: 342 KKCFESMTSRGNKKYG-AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALAN 400
+K F+S G+ K G + + +++ + G F + E+ + ++ E ++ F +
Sbjct: 61 EKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR 120
Query: 401 AYAQQGL----------------CEQAIK----VLQIMEGEG------------------ 422
AY + L C++++K VL ++ EG
Sbjct: 121 AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMN 180
Query: 423 --IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
I PN + N++I A A+ V+ + E PD TY TLM + ++ DE
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 481 VPIIYKRMETDGCTPDRKAKQMLQDAL 507
++ M+++GC+P +L D L
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGL 267
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 178/417 (42%), Gaps = 36/417 (8%)
Query: 88 CKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRL 147
CK+G +D A S L ME G + + Y +++ A + A +F EM+ GL+P
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP-- 517
Query: 148 NLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINE 207
TY IL+D F ++ W IN+
Sbjct: 518 ---------------------------------NNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE-IRERKISLDTHIYNSIIDTFGKYG 266
M F+ N +Y+ I+ G KA E+L+ I+E++ S+ YNSIID F K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
+ A++ + +M + G PN+VT+ SLI C+ AL + +M+ L D +
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
+I ++ T F + G +VY L+ F GK A + + + ++
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724
Query: 387 GVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
G+ + + + + G A + + GI P+ ++ +L+N S G++++A
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA 784
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
+ +K+ V+P+++ Y+T++ R +E ++ M G D +L
Sbjct: 785 SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 198/512 (38%), Gaps = 79/512 (15%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEA-LGFQLSSYSYTHLIEALGNVGRTSE 130
G E +S + CK +L A+ LL +M LG S +YT +I A G E
Sbjct: 269 GAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEE 328
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
A + EM+ G+ + M + G+ + + ++++
Sbjct: 329 AVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNS-FVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
+F +E MK P+S V++ I G + + A E+ + E I+
Sbjct: 389 WFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES-PEAALEIFNDSFESWIA 447
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
+ N I F K G++ A M+++G+ PN+V +N+++ HCR + A ++
Sbjct: 448 -HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 310 FSDMQEQGLYPDPKIFVTIISCL----GEQGKWDTIKK--------------------CF 345
FS+M E+GL P+ + +I EQ WD I + C
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK 566
Query: 346 ESMTSRGN---------KKYG---AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN 393
TS+ K+Y Y ++D F + G +A E + + G SPN
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK--SPN 624
Query: 394 I--FCALANAYAQ------------------------------QGLCEQ-----AIKVLQ 416
+ F +L N + + G C++ A +
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFS 684
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
+ G+ PN+ + N LI+ F N G+ A+ +Y + G+S DL TYTT++ ++
Sbjct: 685 ELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Query: 477 KFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+ +Y + G PD +L + L+
Sbjct: 745 NINLASDLYSELLDLGIVPDEILHMVLVNGLS 776
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 164/372 (44%), Gaps = 13/372 (3%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E + FY+ ++ C+ N+D A S+ ++M G + ++++Y+ LI+ A
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTR-----ETYE 186
+ +M + +YN EM+ + I R +Y
Sbjct: 539 WDVINQMNASNFEANEVIYN----TIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
++D FV G + T EM G PN ++ ++ + + A E+ E++
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
++ LD Y ++ID F K ++ A LF ++ + G+ PN+ +NSLI G A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
++L+ M G+ D + T+I L + G + + + G ++ VLV+
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ G+F A + ++ +K + V+PN+ + + + ++G +A ++ M +GI
Sbjct: 775 LSKKGQFLKASKMLEEMKKKD--VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Query: 425 PNIVMLNMLINA 436
+ + N+L++
Sbjct: 833 HDDTVFNLLVSG 844
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/487 (19%), Positives = 200/487 (41%), Gaps = 49/487 (10%)
Query: 33 FSKIPNSLNSS-NLWIRNKVVNSESDTKTTLFPN---PEAPRPGEELSSEFYSQLISKCC 88
F P + N N +IRNK ++ D + P P LSS S LI
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI---- 220
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
D A + +M +G + + L+ A + EA +F+ ++ G +P
Sbjct: 221 -----DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGL 275
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDS-GIWRTRETYEILLDYFVSAGRLEDTWSTINE 207
L+++ EM G+ ++ETY ++ FV G +E+ ++E
Sbjct: 276 LFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDE 335
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
M G + + +V Y KA ++ + E ++ D +++ +++ F K E
Sbjct: 336 MVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNME 395
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD--------------- 312
+ +A++ +++M+ + P+ V +++I+ + AL +F+D
Sbjct: 396 MEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKI 455
Query: 313 -------------------MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN 353
M+++G+ P+ + ++ D + F M +G
Sbjct: 456 FLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Query: 354 KKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIK 413
+ Y++L+D F + QNA + + + + + I+ + N + G +A +
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 414 VLQ-IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+LQ +++ + + N +I+ F G A+ Y + E+G SP++VT+T+L+ F
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 473 IRTKKFD 479
++ + D
Sbjct: 636 CKSNRMD 642
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 151/340 (44%), Gaps = 11/340 (3%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E ++ YS LI K + A ++ QM A F+ + Y +I L VG+TS+A
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 132 DMLFKEMIYCGLKPR-----LNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
KEM+ +K + YN EM ++G T+
Sbjct: 574 ----KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRE 245
L++ F + R++ +EMK + + Y ++ G + N M K A + E+ E
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM-KTAYTLFSELPE 688
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
+ + +YNS+I F G++ A+ L+ KM +G+ ++ T+ ++I ++G+
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
A +L+S++ + G+ PD + + +++ L ++G++ K E M + +Y+ ++
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808
Query: 366 IFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQ 405
+ G A + +G++ +F L + ++
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
L +N +++ + + + A+ F M V P + N+++ R +A +
Sbjct: 167 LTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEI 226
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
++ M G+ D ++ + K + K F + SRG + G ++++ V +
Sbjct: 227 YNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACK 286
Query: 370 YGKFQNAEECVQALKSE-GVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
A + ++ ++ + GV S + ++ A+ ++G E+A++V+ M G GI +++
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI 346
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
L+N + +A+ +++ ++E G++PD V ++ +++ F + + ++ Y RM
Sbjct: 347 AATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406
Query: 489 ETDGCTPDRK-AKQMLQDALTA 509
++ P M+Q L A
Sbjct: 407 KSVRIAPSSVLVHTMIQGCLKA 428
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%)
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
V + K G ++P F L NAY + + A+ +M + P + +N ++++
Sbjct: 157 VDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVR 216
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ EA +Y+ + GV+ D VT LM+A +R +K +E I++R+ + G PD
Sbjct: 217 SNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPD 273
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 190/431 (44%), Gaps = 13/431 (3%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS ++ C++ L+ A+ L E S S+ ++ +G A F ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
CGL P + +NI +M G+ TY IL F G +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI- 258
W I +M KG P+ Y+ ++ G +L+++ R L++ I S+
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ K G + EAL LF +M+ +G+ P++V ++ +I C+ G + AL L+ +M ++ +
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + ++ L ++G + +S+ S G +Y +++D + + G + A E
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ + G+ S F +L Y + +A K+L +++ G+ P++V L++A++
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF------------IRTKKFDEVPIIYK 486
N G + +K G+ P VTY+ + K +R + F++ +
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 487 RMETDGCTPDR 497
ME++G PD+
Sbjct: 610 DMESEGIPPDQ 620
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 48/405 (11%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSY-SYTHLIEALGNVGRTSEADMLFKEM 138
Y+ L+ C+ GN+D + LL M + GF+L+S + ++ L GR EA LF +M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
GL P L Y I++ G+
Sbjct: 390 KADGLSPDL-----------------------------------VAYSIVIHGLCKLGKF 414
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ +EM K PNS + ++ GM +A +L+ + +LD +YN +
Sbjct: 415 DMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIV 474
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
ID + K G + EAL+LF + + G+ P++ T+NSLI +C+ + +A + ++ GL
Sbjct: 475 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL 534
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA-- 376
P + T++ G +I + M + G Y+V+ + K +N
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 377 -------EECVQALK---SEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
E+C Q L+ SEG+ + + + A L+IM+ ++ +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
N+LI++ G +A S + ++E VS YTTL+KA
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 164/352 (46%), Gaps = 22/352 (6%)
Query: 175 DSGIWRTRETYEILLDYFVS-AGRL---EDTWSTINEMKMKGFQPNSFVYSKIVGLYRD- 229
+ G +R E+ ++ D + + RL +D+ + +MK + ++ Y+ ++ +R+
Sbjct: 113 EEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRET 172
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
+ MW +V +EI+++ + H Y++++D + +L +A+ + + + P++V+
Sbjct: 173 DKMW----DVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+NS++ +C+ G A + F + + GL P +I+ L G + M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGL 407
G + Y +L F G A E ++ + +G +SP++ + L Q G
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG--LSPDVITYTILLCGQCQLGN 342
Query: 408 CEQAIKVLQIMEGEGIEPN-IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYT 466
+ + +L+ M G E N I+ +++++ GR EA+S+++ +K G+SPDLV Y+
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTA----LERRS 514
++ + KFD +Y M P+ + L L LE RS
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 148/363 (40%), Gaps = 36/363 (9%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
+ TY ++D +LED + + K P+ ++ I+ Y G A
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ + + + +N +I+ G + EAL+L M K GV P+ VT+N L K
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFV------------------------------TII 329
G + A + DM ++GL PD + +II
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 330 SC------LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
C L + G+ D F M + G Y++++ + GKF A +
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 384 KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRY 443
+ +L + AL Q+G+ +A +L + G +IV+ N++I+ ++ +G
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 444 MEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
EA+ ++ + E+G++P + T+ +L+ + +T+ E I ++ G P + L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 504 QDA 506
DA
Sbjct: 545 MDA 547
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 23/251 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI CK N+ A +L ++ G S SYT L++A N G T D L +EM
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P Y++ W+ +L + E
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRG------------------WKHENCNHVLRERI-----FE 602
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +M+ +G P+ Y+ I+ A LE ++ R + + YN +I
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D+ YG + +A +Q++ V + + +LIK HC +GD A+ LF + +G
Sbjct: 663 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Query: 320 PDPKIFVTIIS 330
+ + +I+
Sbjct: 723 VSIRDYSAVIN 733
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 111/289 (38%), Gaps = 12/289 (4%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLF 135
+S + L+ C++G L A SLL + + G L Y +I+ G EA LF
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 136 KEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
K +I G+ P + +N + G+ + +Y L+D + +
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRD-----------NGMWKKATEVLEEI 243
G + EMK +G P + YS I GL R +++K + L ++
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
I D YN+II + L A M+ + + T+N LI C G
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
KA + +QEQ + + T+I +G + K F + RG
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 190/431 (44%), Gaps = 13/431 (3%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS ++ C++ L+ A+ L E S S+ ++ +G A F ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
CGL P + +NI +M G+ TY IL F G +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI- 258
W I +M KG P+ Y+ ++ G +L+++ R L++ I S+
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ K G + EAL LF +M+ +G+ P++V ++ +I C+ G + AL L+ +M ++ +
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + ++ L ++G + +S+ S G +Y +++D + + G + A E
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ + G+ S F +L Y + +A K+L +++ G+ P++V L++A++
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF------------IRTKKFDEVPIIYK 486
N G + +K G+ P VTY+ + K +R + F++ +
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 487 RMETDGCTPDR 497
ME++G PD+
Sbjct: 610 DMESEGIPPDQ 620
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 48/405 (11%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSY-SYTHLIEALGNVGRTSEADMLFKEM 138
Y+ L+ C+ GN+D + LL M + GF+L+S + ++ L GR EA LF +M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
GL P L Y I++ G+
Sbjct: 390 KADGLSPDL-----------------------------------VAYSIVIHGLCKLGKF 414
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ +EM K PNS + ++ GM +A +L+ + +LD +YN +
Sbjct: 415 DMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIV 474
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
ID + K G + EAL+LF + + G+ P++ T+NSLI +C+ + +A + ++ GL
Sbjct: 475 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL 534
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA-- 376
P + T++ G +I + M + G Y+V+ + K +N
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 594
Query: 377 -------EECVQALK---SEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
E+C Q L+ SEG+ + + + A L+IM+ ++ +
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
N+LI++ G +A S + ++E VS YTTL+KA
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 699
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 152/325 (46%), Gaps = 18/325 (5%)
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRD-NGMWKKATEVLEEIRERKISLDTHIYN 256
++D+ + +MK + ++ Y+ ++ +R+ + MW +V +EI+++ + H Y+
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMW----DVYKEIKDK----NEHTYS 191
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
+++D + +L +A+ + + + P++V++NS++ +C+ G A + F + +
Sbjct: 192 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
GL P +I+ L G + M G + Y +L F G A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 377 EECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPN-IVMLNML 433
E ++ + +G +SP++ + L Q G + + +L+ M G E N I+ +++
Sbjct: 312 WEVIRDMLDKG--LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
++ GR EA+S+++ +K G+SPDLV Y+ ++ + KFD +Y M
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 494 TPDRKAKQMLQDALTA----LERRS 514
P+ + L L LE RS
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARS 454
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 148/363 (40%), Gaps = 36/363 (9%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
+ TY ++D +LED + + K P+ ++ I+ Y G A
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ + + + +N +I+ G + EAL+L M K GV P+ VT+N L K
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFV------------------------------TII 329
G + A + DM ++GL PD + +II
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 330 SC------LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
C L + G+ D F M + G Y++++ + GKF A +
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 384 KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRY 443
+ +L + AL Q+G+ +A +L + G +IV+ N++I+ ++ +G
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 444 MEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
EA+ ++ + E+G++P + T+ +L+ + +T+ E I ++ G P + L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 504 QDA 506
DA
Sbjct: 545 MDA 547
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 23/251 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI CK N+ A +L ++ G S SYT L++A N G T D L +EM
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P Y++ W+ +L + E
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRG------------------WKHENCNHVLRERI-----FE 602
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +M+ +G P+ Y+ I+ A LE ++ R + + YN +I
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D+ YG + +A +Q++ V + + +LIK HC +GD A+ LF + +G
Sbjct: 663 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Query: 320 PDPKIFVTIIS 330
+ + +I+
Sbjct: 723 VSIRDYSAVIN 733
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 111/289 (38%), Gaps = 12/289 (4%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLF 135
+S + L+ C++G L A SLL + + G L Y +I+ G EA LF
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 136 KEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
K +I G+ P + +N + G+ + +Y L+D + +
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRD-----------NGMWKKATEVLEEI 243
G + EMK +G P + YS I GL R +++K + L ++
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
I D YN+II + L A M+ + + T+N LI C G
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
KA + +QEQ + + T+I +G + K F + RG
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 184/420 (43%), Gaps = 4/420 (0%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E++ Y ++ +E L +M A G L ++ L+ L G E
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ L ++I G+ P L YN+ +++ G TY L+
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+ ++ + +M +G +P+S+ Y+ ++ Y GM + A ++ + D
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
Y S+ID GE AL LF + +G++PN++ +N+LIK +G +A L +
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
+M E+GL P+ + F +++ L + G + M S+G + +L+ +
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 372 KFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
K +NA E + + G V P+++ +L N + E ++ + M +G PN+
Sbjct: 476 KMENALEILDVMLDNG--VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
N+L+ + + EA+ + +K V+PD VT+ TL+ F + D ++++ME
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 182/409 (44%)
Query: 88 CKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRL 147
CK A+ LL M + G +++ +Y ++ +E LF +M+ G+ L
Sbjct: 157 CKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCL 216
Query: 148 NLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINE 207
+ +N +++ G+ TY + + G L+ +
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
+ +G +P+ Y+ ++ N +++A L ++ + D++ YN++I + K G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
+ A ++ G P+ T+ SLI C EG+ +AL LF++ +G+ P+ ++ T
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+I L QG + M+ +G + +LV+ + G +A+ V+ + S+G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
F L + Y+ Q E A+++L +M G++P++ N L+N ++ + M
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
Y + E G +P+L T+ L+++ R +K DE + + M+ PD
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 178/428 (41%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ ++S G D+A + +M G YS+T +++ R A L M
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G + + Y +M+ SG+ T+ LL G ++
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++++ +G PN F Y+ + G A ++ + E+ D YN++I
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
K + EA KM EG+ P+ T+N+LI +C+ G A + D G
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + ++I L +G+ + F +G K +Y L+ G A +
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ +G++ F L N + G A ++++M +G P+I N+LI+ +S
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
+ A+ + + ++GV PD+ TY +L+ +T KF++V YK M GC P+
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 500 KQMLQDAL 507
+L ++L
Sbjct: 534 FNILLESL 541
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 173/425 (40%), Gaps = 34/425 (8%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E S Y+ LI+ CK G + A ++ GF ++Y LI+ L + G T+ A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
LF E + G+KP + LYN EM + G+ +T+ IL++
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
G + D + M KG+ P+ F ++ ++ Y + A E+L+ + + + D
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+ YNS+++ K + + ++ + M ++G PN+ T+N L++ CR +AL L
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
+M+ + + PD F T+I + G D G Y
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLD----------------------------GAYT 587
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
F+ EE A K + NI + +A+ ++ A K+ Q M + P+
Sbjct: 588 LFRKMEE---AYKVSSSTPTYNI---IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
++++ F G + E+G P L T ++ + E I RM
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 492 GCTPD 496
G P+
Sbjct: 702 GLVPE 706
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 146/371 (39%), Gaps = 70/371 (18%)
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
G++++ + M +P F Y+ I+ + D+G + +A +V +R+R I+ D + +
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIV--------------------------- 288
+ +F K AL+L M +G N+V
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 289 --------TWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDT 340
T+N L++ C++GD + L + ++G+ P+ + I L ++G+ D
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 341 IKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALAN 400
+ + +G K Y L+ + KFQ AE + + +EG+ + L
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 401 AYAQ------------------------------QGLCEQ-----AIKVLQIMEGEGIEP 425
Y + GLC + A+ + G+GI+P
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 426 NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
N+++ N LI SN G +EA + + + E G+ P++ T+ L+ + + +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 486 KRMETDGCTPD 496
K M + G PD
Sbjct: 450 KVMISKGYFPD 460
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 126/289 (43%), Gaps = 7/289 (2%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH----IYNSIIDTFGKYGE 267
GF+ Y ++ G ++ EVL ++RE ++ H +Y + +G+ G+
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE---NVGNHMLEGVYVGAMKNYGRKGK 91
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
+ EA+ +F +M P + ++N+++ G + +A ++ M+++G+ PD F
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+ + + + +M+S+G + Y +V F + E + + G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
V + + F L ++G ++ K+L + G+ PN+ N+ I G A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ + E G PD++TY L+ + KF E + +M +G PD
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 1/299 (0%)
Query: 55 ESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYS 114
E +T L EA G + + Y+ LI +G + A L +M G +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 115 YTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV 174
+ L+ L +G S+AD L K MI G P + +NI M+
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
D+G+ TY LL+ + ED T M KG PN F ++ ++
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE-GVRPNIVTWNSL 293
+A +LEE++ + ++ D + ++ID F K G+L A LF KM++ V + T+N +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 294 IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
I + + T A LF +M ++ L PD + ++ + G + K M G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 207/481 (43%), Gaps = 43/481 (8%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G +S + ++ IS CK + A +L+ + L + + L+ LG S
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM----VDSG--IWRTRETY 185
+ L +M ++P + I +M D G I +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMK-GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
L+D GRL++ + MK++ PN+ Y+ ++ Y G + A EV+ ++
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
E +I + N+I+ ++ L A+ F+ M+KEGV+ N+VT+ +LI C +
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGE-QGKWDTIK--------------------- 342
KA+ + M E G PD KI+ +IS L + + D I+
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 343 ----------KCFESMTS---RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
K +E +T G K Y L+ FG++ F++ E ++ ++ +G+
Sbjct: 554 GLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 390 VSPNIFCALANAYAQQGLCEQAIKVLQIME-GEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + A+ +AY G ++A+K+ + M + PN V+ N+LINAFS G + +A+S
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+ +K V P++ TY L K + + + + M C P++ ++L + L+
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Query: 509 A 509
Sbjct: 734 G 734
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 36/336 (10%)
Query: 182 RETYEILLDYFVSAGRL---EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATE 238
R T +I+L + V GRL E + I+ G PNS ++ + N A +
Sbjct: 222 RITADIVL-HEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWD 280
Query: 239 VLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHC 298
+L ++ + K L+ +N+++ G+ ++ L +KM + +RP++VT LI C
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 299 REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
+ +AL +F M+ G D G K D+I
Sbjct: 341 KSRRVDEALEVFEKMR--GKRTDD----------GNVIKADSIH---------------- 372
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQ 416
+ L+D + G+ + AEE + +K E +PN + L + Y + G E A +V+
Sbjct: 373 -FNTLIDGLCKVGRLKEAEELLVRMKLEE-RCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M+ + I+PN+V +N ++ A+ + +++ GV ++VTY TL+ A
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 477 KFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
++ Y++M GC+PD K L L + R
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 207/481 (43%), Gaps = 43/481 (8%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G +S + ++ IS CK + A +L+ + L + + L+ LG S
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM----VDSG--IWRTRETY 185
+ L +M ++P + I +M D G I +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMK-GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
L+D GRL++ + MK++ PN+ Y+ ++ Y G + A EV+ ++
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
E +I + N+I+ ++ L A+ F+ M+KEGV+ N+VT+ +LI C +
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGE-QGKWDTIK--------------------- 342
KA+ + M E G PD KI+ +IS L + + D I+
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 343 ----------KCFESMTS---RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
K +E +T G K Y L+ FG++ F++ E ++ ++ +G+
Sbjct: 554 GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 390 VSPNIFCALANAYAQQGLCEQAIKVLQIME-GEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + A+ +AY G ++A+K+ + M + PN V+ N+LINAFS G + +A+S
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+ +K V P++ TY L K + + + + M C P++ ++L + L+
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Query: 509 A 509
Sbjct: 734 G 734
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 32/316 (10%)
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
E + I+ G PNS ++ + N A ++L ++ + K L+ +N++
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ G+ ++ L +KM + +RP++VT LI C+ +AL +F M+ G
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR--GK 358
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
D G K D+I + L+D + G+ + AEE
Sbjct: 359 RTDD----------GNVIKADSIH-----------------FNTLIDGLCKVGRLKEAEE 391
Query: 379 CVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+ +K E V PN + L + Y + G E A +V+ M+ + I+PN+V +N ++
Sbjct: 392 LLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
A+ + +++ GV ++VTY TL+ A ++ Y++M GC+PD
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 497 RKAKQMLQDALTALER 512
K L L + R
Sbjct: 511 AKIYYALISGLCQVRR 526
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 183/453 (40%), Gaps = 35/453 (7%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
++ I+ CK G ++ A+ L ++ME G + ++ +I+ LG GR EA M ++M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
+ G++P L Y+I EM G Y L+D F+ AG L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ M KG S Y+ ++ Y NG A +L+E+ +++ + S+
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I + AL+ +M + P +LI C+ G ++KAL L+ +G
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 319 YPDPKIFVTIISCLGEQGKWD-----------------------TIKKC----------- 344
D + ++ L E GK D I C
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 345 -FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
+ M RG K Y++L+ K + A + K G+L + + +
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+ E+ + M + ++PN V+ N LI A+ +GR A+ + +K G+SP+
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
TYT+L+K + +E ++++ M +G P+
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 176/411 (42%), Gaps = 37/411 (9%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTH-------------- 117
G L+S Y+ LI CK G D A LL +M ++GF ++ S+T
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 118 ---------------------LIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXX 156
LI L G+ S+A L+ + + G N
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 157 XXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPN 216
E++ G R +Y L+ +L++ + ++EM +G +P+
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 217 SFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
++ YS ++ GL+ N + ++A + ++ + + D + Y+ +ID K E + F
Sbjct: 575 NYTYSILICGLFNMNKV-EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
+M + V+PN V +N LI+ +CR G + AL L DM+ +G+ P+ + ++I +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
+ + K FE M G + Y L+D +G+ G+ E ++ + S+ V + +
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
+ YA+ G +A ++L M +GI P+ + I + G +EA
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 143/325 (44%), Gaps = 1/325 (0%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
+ + G++ ++ T ILL V A + ++ KG P+ ++++ + + G
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
++A ++ ++ E ++ + +N++ID G G EA KM + G+ P ++T++
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
L+K R A + +M ++G P+ ++ +I E G + + + M S+G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
+ Y L+ + + G+ NAE ++ + S G V+ F ++ + + A+
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ + M + P +L LI+ G++ +A+ ++ G D T L+
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDR 497
K DE I K + GC DR
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDR 540
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 141/333 (42%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ LIS CK G +A+ L Q GF + + + L+ L G+ EA + KE++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G YN EMV G+ TY IL+ + ++E+
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
++ K G P+ + YS ++ ++ E +E+ + + +T +YN +I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+ + G L AL+L M+ +G+ PN T+ SLIK +A LF +M+ +GL P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + +I G+ G+ ++ M S+ Y V++ + + G A +
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIK 413
++ +G++ + Y +QG +A K
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 134/325 (41%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
++V G+ + ++ F G++E+ ++M+ G PN ++ ++ G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ +A E++ ER + Y+ ++ + +G+A + +M K+G PN++ +N
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI G KA+ + M +GL + T+I + G+ D ++ + M S
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G + ++ + + F +A V + + + L + + G +A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+++ +G + N L++ AG+ EA + I G D V+Y TL+
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPD 496
KK DE + M G PD
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPD 574
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+G+ P++ + INAF G+ EA+ ++ ++E+GV+P++VT+ T++ ++DE
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 481 VPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+ ++M G P +L LT +R
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 183/453 (40%), Gaps = 35/453 (7%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
++ I+ CK G ++ A+ L ++ME G + ++ +I+ LG GR EA M ++M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
+ G++P L Y+I EM G Y L+D F+ AG L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ M KG S Y+ ++ Y NG A +L+E+ +++ + S+
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I + AL+ +M + P +LI C+ G ++KAL L+ +G
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 319 YPDPKIFVTIISCLGEQGKWD-----------------------TIKKC----------- 344
D + ++ L E GK D I C
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 345 -FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
+ M RG K Y++L+ K + A + K G+L + + +
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+ E+ + M + ++PN V+ N LI A+ +GR A+ + +K G+SP+
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
TYT+L+K + +E ++++ M +G P+
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 176/411 (42%), Gaps = 37/411 (9%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTH-------------- 117
G L+S Y+ LI CK G D A LL +M ++GF ++ S+T
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 118 ---------------------LIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXX 156
LI L G+ S+A L+ + + G N
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 157 XXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPN 216
E++ G R +Y L+ +L++ + ++EM +G +P+
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 217 SFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
++ YS ++ GL+ N + ++A + ++ + + D + Y+ +ID K E + F
Sbjct: 575 NYTYSILICGLFNMNKV-EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
+M + V+PN V +N LI+ +CR G + AL L DM+ +G+ P+ + ++I +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
+ + K FE M G + Y L+D +G+ G+ E ++ + S+ V + +
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
+ YA+ G +A ++L M +GI P+ + I + G +EA
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 143/325 (44%), Gaps = 1/325 (0%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
+ + G++ ++ T ILL V A + ++ KG P+ ++++ + + G
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
++A ++ ++ E ++ + +N++ID G G EA KM + G+ P ++T++
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
L+K R A + +M ++G P+ ++ +I E G + + + M S+G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
+ Y L+ + + G+ NAE ++ + S G V+ F ++ + + A+
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ + M + P +L LI+ G++ +A+ ++ G D T L+
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDR 497
K DE I K + GC DR
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDR 540
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 141/333 (42%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ LIS CK G +A+ L Q GF + + + L+ L G+ EA + KE++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G YN EMV G+ TY IL+ + ++E+
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
++ K G P+ + YS ++ ++ E +E+ + + +T +YN +I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+ + G L AL+L M+ +G+ PN T+ SLIK +A LF +M+ +GL P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + +I G+ G+ ++ M S+ Y V++ + + G A +
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIK 413
++ +G++ + Y +QG +A K
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 134/325 (41%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
++V G+ + ++ F G++E+ ++M+ G PN ++ ++ G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ +A E++ ER + Y+ ++ + +G+A + +M K+G PN++ +N
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI G KA+ + M +GL + T+I + G+ D ++ + M S
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G + ++ + + F +A V + + + L + + G +A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+++ +G + N L++ AG+ EA + I G D V+Y TL+
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPD 496
KK DE + M G PD
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPD 574
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%)
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+G+ P++ + INAF G+ EA+ ++ ++E+GV+P++VT+ T++ ++DE
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 481 VPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+ ++M G P +L LT +R
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 191/465 (41%), Gaps = 39/465 (8%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEA----- 121
E P P +S +S LI K G +++A+ +ME LG S + +I+
Sbjct: 368 EGPSP----NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQ 423
Query: 122 ----------------LGNV-------------GRTSEADMLFKEMIYCGLKPRLNLYNI 152
L NV G+T EA L +M G+ P + YN
Sbjct: 424 KHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 153 XXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKG 212
+++ G+ TY IL+D ++ +N M
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEE-IRERKISLDTHIYNSIIDTFGKYGELGEA 271
+ N VY I+ G KA E+L I E+++ + YNSIID F K GE+ A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+ + +M G+ PN++T+ SL+ C+ +AL + +M+ +G+ D + +I
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
++ ++ F + G +Y L+ F G A + + + +G+
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH 451
+ L + + G A ++ M+ G+ P+ ++ +++N S G++++ + ++
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783
Query: 452 HIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+K++ V+P+++ Y ++ R DE ++ M G PD
Sbjct: 784 EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 192/429 (44%), Gaps = 5/429 (1%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSY-SYTHLIEALGNVGRTSE 130
G E S YS + CCK +L A SLL +M+ + S +YT +I A G +
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
A L EM+ G+ + +M G T+ +L++
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
+F G +E +M++ G P+ F I+ + ++A ++ +E E ++
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA- 441
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
+ + N+I+ K G+ EA +L KM+ G+ PN+V++N+++ HCR+ + A +F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 311 SDMQEQGLYPDPKIFVTIIS-CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
S++ E+GL P+ + +I C + + ++ MTS + G VY +++ +
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALE-VVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 370 YGKFQNAEECVQALKSEGVL-VSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
G+ A E + + E L VS + ++ + + ++G + A+ + M G GI PN++
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
L+N R +A+ + +K GV D+ Y L+ F + + ++ +
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 489 ETDGCTPDR 497
+G P +
Sbjct: 681 LEEGLNPSQ 689
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 167/391 (42%), Gaps = 38/391 (9%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG 142
++S CK+G D A LL++ME+ G + SY +++ A ++F ++ G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGI--------------------WRTR 182
LKP Y+I M S I + R
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 183 E----------------TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-G 225
E +Y ++D F G ++ + EM G PN Y+ ++ G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 226 LYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRP 285
L ++N M +A E+ +E++ + + LD Y ++ID F K + A LF ++ +EG+ P
Sbjct: 629 LCKNNRM-DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 286 NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF 345
+ +NSLI G+ AL+L+ M + GL D + T+I L + G + +
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQ 405
M + G +Y V+V+ + G+F + + +K V + I+ A+ + ++
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 807
Query: 406 GLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
G ++A ++ M +GI P+ ++L++
Sbjct: 808 GNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 200/512 (39%), Gaps = 81/512 (15%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTH-LIEALGNVGRTSE 130
G E++S ++ L++ K+ D A+ ++ QM L + + Y + + AL +E
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDV-IPFFPYVNRTLSALVQRNSLTE 216
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
A L+ M+ G+ N+ E++ I R E +L
Sbjct: 217 AKELYSRMVAIGVDGD----NVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS 272
Query: 191 YFVSAG----RLEDTWSTINEMKMKGF-QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE 245
V A L S + EMK K P+ Y+ ++ G A + +E+
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLS 332
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
IS++ S+I K +L AL LF KM+KEG PN VT++ LI+W + G+ K
Sbjct: 333 DGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392
Query: 306 ALNLFSDMQEQGLYPD--------------------------------PKIFV--TIISC 331
AL + M+ GL P +FV TI+S
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW 452
Query: 332 LGEQGKWDTIKKCFESMTSRGN-----------------------------------KKY 356
L +QGK D + M SRG K
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL- 415
Y++L+D + QNA E V + S + V+ ++ + N + G +A ++L
Sbjct: 513 NYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
++E + + + + N +I+ F G A++ Y + +G+SP+++TYT+LM +
Sbjct: 573 NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKN 632
Query: 476 KKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ D+ + M+ G D A L D
Sbjct: 633 NRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 38/305 (12%)
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQM-EALGFQLSSYSYTHLIEALGNVGRTSEAD 132
E++ Y +I+ CK G +A LLA M E +S SY +I+ G A
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604
Query: 133 MLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYF 192
++EM G+ P + Y EM + G+ Y L+D F
Sbjct: 605 AAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG-------MWKK---------- 235
+E + +E+ +G P+ +Y+ ++ +R+ G ++KK
Sbjct: 665 CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 236 ------------------ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVK 277
A+E+ E++ + D IY I++ K G+ + +K+F +
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
M+K V PN++ +N++I H REG+ +A L +M ++G+ PD F ++S G+ G
Sbjct: 785 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS--GQVGN 842
Query: 338 WDTIK 342
++
Sbjct: 843 LQPVR 847
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 35/228 (15%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E G +L Y LI CK N++ A +L +++ G S Y LI N+G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
A L+K+M+ GL+ L TY
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLG-----------------------------------TYT 728
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
L+D + G L EM+ G P+ +Y+ IV G + K ++ EE+++
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
++ + IYN++I + G L EA +L +M +G+ P+ T++ L+
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 123/292 (42%), Gaps = 36/292 (12%)
Query: 205 INEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGK 264
++ K GF+ NS ++ ++ Y + A +++ ++ E + N + +
Sbjct: 151 VDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQ 210
Query: 265 YGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKI 324
L EA +L+ +M GV + VT L++ RE +AL + S E+G PD +
Sbjct: 211 RNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLL 270
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALK 384
+ ++ C +++ A ++ +K
Sbjct: 271 YSL------------AVQACCKTL-----------------------DLAMANSLLREMK 295
Query: 385 SEGVLV-SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRY 443
+ + V S + ++ A +QG + AI++ M +GI N+V LI
Sbjct: 296 EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355
Query: 444 MEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
+ A+ ++ +++ G SP+ VT++ L++ F + + ++ YK+ME G TP
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTP 407
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 179/427 (41%), Gaps = 2/427 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ LI+ CK G +DRA L ME G + +Y+ LI+ G LF + +
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ G+K + +++ M+ GI TY IL+ GR+
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + ++ +G +P+ YS ++ + G + + E++ + D IY ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K G + A++ VKM + +R N+V +NSLI CR + +AL +F M G+
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD F T++ +G+ + F M G + Y L+D F ++ K +
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL-QIMEGEGIEPNIVMLNMLINAFS 438
++ + + + + + E A K ++EG+ +EP+IV N +I +
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK-MEPDIVTYNTMICGYC 647
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
+ R EA ++ +K + P+ VT T L+ + D ++ M G P+
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 499 AKQMLQD 505
L D
Sbjct: 708 TYGCLMD 714
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 150/335 (44%), Gaps = 35/335 (10%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
++D G T+ L++ F G ++ + M+ +G +P+ YS ++ Y GM
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
++ + + + LD +++S ID + K G+L A ++ +M +G+ PN+VT+
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
LIK C++G +A ++ + ++G+ P + ++I + G + +E M G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
+Y VLVD ++QGL A+
Sbjct: 457 YPPDVVIYGVLVD-----------------------------------GLSKQGLMLHAM 481
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ M G+ I N+V+ N LI+ + R+ EA+ V+ + G+ PD+ T+TT+M+
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
I + +E ++ RM G PD A L DA
Sbjct: 542 IMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 183/429 (42%), Gaps = 4/429 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI C++G + A + Q+ G + S +Y+ LI+ G L+++MI
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + +Y + +M+ I + L+D + R +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M + G +P+ ++ ++ + G ++A + + + + D Y ++I
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D F K+ + L+LF MQ+ + +I N +I + A F+++ E +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T+I + D ++ FE + +L+ + + A
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ +G + + L + +++ E + K+ + M+ +GI P+IV +++I+
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
GR EA +++H ++ + PD+V Y L++ + + + E ++Y+ M +G PD
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD--- 810
Query: 500 KQMLQDALT 508
+LQ AL+
Sbjct: 811 -DLLQRALS 818
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 188/444 (42%), Gaps = 41/444 (9%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
+A G +L +S I K G+L A + +M G + +YT LI+ L G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
R EA ++ +++ G++P + TY
Sbjct: 406 RIYEAFGMYGQILKRGMEPSI-----------------------------------VTYS 430
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
L+D F G L ++ +M G+ P+ +Y +V G+ A ++ +
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
I L+ ++NS+ID + + EALK+F M G++P++ T+ ++++ EG +A
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
L LF M + GL PD + T+I + K + F+ M AV V++ +
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 367 FGQYGKFQNAEECVQAL---KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ + ++A + L K E +V+ N + Y ++A ++ ++++
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYN---TMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
PN V L +LI+ A+ ++ + E G P+ VTY LM F ++ +
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 484 IYKRMETDGCTPDRKAKQMLQDAL 507
+++ M+ G +P + ++ D L
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGL 751
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 1/251 (0%)
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
++D GE+ +AL + + G R IV+ N ++K + A L S + + G
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCG 281
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
P+ F T+I+ ++G+ D F+ M RG + Y+ L+D + + G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ +GV + +F + + Y + G A V + M +GI PN+V +LI
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
GR EA +Y I + G+ P +VTY++L+ F + +Y+ M G PD
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 498 KAKQMLQDALT 508
+L D L+
Sbjct: 462 VIYGVLVDGLS 472
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 187/467 (40%), Gaps = 45/467 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ ++ C++GNL+ A LL + E S + Y I L G T +A L E+I
Sbjct: 219 YAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFINGLCVTGETEKAVALILELI 272
Query: 140 ---YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
Y + + EM + G ++D +
Sbjct: 273 DRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNM 332
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
L + +++M KG + N + S I+ Y M +A E +E R+ I LD YN
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN 392
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
D K G + EA +L +M+ G+ P+++ + +LI +C +G AL+L +M
Sbjct: 393 VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN 452
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
G+ PD + ++S L G + + + +E M + G K +V+++ K + A
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIK----------------------- 413
E+ +L+ + P + Y + GL ++A K
Sbjct: 513 EDFFSSLEQK----CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCI 568
Query: 414 ---------VLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
VL+ M +EP M +I AF EA ++ + E G+ PDL T
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALE 511
YT ++ + R + + +++ M+ G PD +L D L+
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD 675
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 182/418 (43%), Gaps = 12/418 (2%)
Query: 88 CKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRL 147
C E + A S++ +ME +GF L Y+ +I+ EA +M+ GLK
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 148 NLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINE 207
+ ++ E D I+ R Y + D GR+E+ + + E
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
MK +G P+ Y+ ++ Y G A ++++E+ +S D YN ++ + G
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
E L+++ +M+ EG +PN VT + +I+ C +A + FS ++++ P+ K +
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC--PENK--AS 529
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+ E G K F + K +VY L G + A + ++ + +
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYPLRK---SVYIKLFFSLCIEGYLEKAHDVLKKMSAYR 586
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
V ++ + A+ + +A + M G+ P++ ++I+ + +A
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
S++ +K+ G+ PD+VTYT L+ ++ K D P ++ G RKA ++L++
Sbjct: 647 SLFEDMKQRGIKPDVVTYTVLLDRYL---KLD--PEHHETCSVQGEVGKRKASEVLRE 699
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 155/369 (42%), Gaps = 79/369 (21%)
Query: 214 QPNSFVYSKIVGL----YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELG 269
+ SFV ++ G Y GM+ +AT+VL + + +D N +++ ++G++G
Sbjct: 139 KKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIG 198
Query: 270 EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTII 329
+ LF ++++ G+ N T+ ++K CR+G+ +A L + + Y K F+ +
Sbjct: 199 MLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGY---KTFINGL 255
Query: 330 SCLGEQGKW---------------DTIKKCFESMTSRG---NKKYGAVYAVLVDI----F 367
GE K D ++ M RG K A +V++++ F
Sbjct: 256 CVTGETEKAVALILELIDRKYLAGDDLRAVL-GMVVRGFCNEMKMKAAESVIIEMEEIGF 314
Query: 368 G-----------QYGKFQNAEECVQALK---SEGVLVSPNIFCALANAYAQQGLC----- 408
G +Y K N E + L +G+ V+ I + Y + +C
Sbjct: 315 GLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALE 374
Query: 409 ------------------------------EQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
E+A ++LQ M+ GI P+++ LI+ +
Sbjct: 375 KFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 434
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
G+ ++A+ + + +G+SPDL+TY L+ R +EV IY+RM+ +G P+
Sbjct: 435 LQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV 494
Query: 499 AKQMLQDAL 507
++ + L
Sbjct: 495 TNSVIIEGL 503
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 159/405 (39%), Gaps = 24/405 (5%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
K G ++ A LL +M+ G +YT LI+ G+ +A L EMI G+ P L
Sbjct: 400 KLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLI 459
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
YN+ M G T ++++ A ++++ + +
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Query: 209 KMKGFQPN-SFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
+ K + SFV Y + G+ KKA + + + L +Y + + G
Sbjct: 520 EQKCPENKASFVKG-----YCEAGLSKKAYKAFVRL---EYPLRKSVYIKLFFSLCIEGY 571
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
L +A + KM V P +I C+ + +A LF M E+GL PD +
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF--------------GQYGKF 373
+I + + FE M RG K Y VL+D + G+ GK
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK- 690
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+ A E ++ + G+ + + L + + EQA ++ M G+EP++V L
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
I+++ G A+++ + + P + A ++ K+F
Sbjct: 751 ISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRF 795
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 101/255 (39%), Gaps = 48/255 (18%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
L Y +L C EG L++A +L +M A + +I A + EA +L
Sbjct: 554 LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVL 613
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
F M+ GL P L TY I++ +
Sbjct: 614 FDTMVERGLIPDLF-----------------------------------TYTIMIHTYCR 638
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLY-------------RDNGMWKKATEVLE 241
L+ S +MK +G +P+ Y+ ++ Y + +KA+EVL
Sbjct: 639 LNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLR 698
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
E I LD Y +ID K L +A +LF +M G+ P++V + +LI + R+G
Sbjct: 699 EFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Query: 302 DYTKALNLFSDMQEQ 316
A+ L +++ ++
Sbjct: 759 YIDMAVTLVTELSKK 773
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 6/323 (1%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
+Y L++ + G+ + + M+ G +P++ Y I+ + + +K+A EV E +
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 244 RERK---ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ K + D +Y+ +I + K G +A K+F M +GV + VT+NSL+ + E
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---E 292
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
Y + ++ MQ + PD + +I G + + FE M G + Y
Sbjct: 293 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
+L+D F G + A+ ++++ + + + + +AY E A K + ++
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+G EPNIV LI ++ A + M VY ++ SG+ + TT+M A R K F
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 472
Query: 481 VPIIYKRMETDGCTPDRKAKQML 503
YK ME+ G PD+KAK +L
Sbjct: 473 ALGWYKEMESCGVPPDQKAKNVL 495
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 158/384 (41%), Gaps = 45/384 (11%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG 142
LI+ K GN + A +L+ + +G + SYT L+E+ G G+ + A+ +F+ M G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVD---SGIWRTRETYEILLDYFVSAGRLE 199
+P Y I ++D S + ++ Y +++ + AG E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M KG ++ Y+ ++ +K+ +++ ++++ I D Y +I
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+G+ EAL +F +M GVRP +N L+ G +A +F M+ ++
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T++S Y D+ G AE+
Sbjct: 382 PDLWSYTTMLSA----------------------------YVNASDMEG-------AEKF 406
Query: 380 VQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ +K +G PNI + L YA+ E+ ++V + M GI+ N +L +++A
Sbjct: 407 FKRIKVDG--FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 464
Query: 438 SNAGRYMEAMSVYHHIKESGVSPD 461
+ A+ Y ++ GV PD
Sbjct: 465 GRCKNFGSALGWYKEMESCGVPPD 488
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 137/335 (40%), Gaps = 35/335 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ + G + A ++ +M++ G + S+ +Y +++ + EA+ +F+ ++
Sbjct: 177 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 236
Query: 140 ---YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS-- 194
LKP +Y++ MV G+ ++ TY L+ + S
Sbjct: 237 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK 296
Query: 195 ------------------------------AGRLEDTWSTINEMKMKGFQPNSFVYSKIV 224
A R E+ S EM G +P Y+ ++
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 225 GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
+ +GM ++A V + +R +I D Y +++ + ++ A K F +++ +G
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
PNIVT+ +LIK + + D K + ++ M+ G+ + I TI+ G + +
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 476
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
++ M S G VL+ + + + A+E
Sbjct: 477 YKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 125/285 (43%), Gaps = 8/285 (2%)
Query: 61 TLFPNPEAP-RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLI 119
TL ++P +P +++ Y +I K GN ++A + + M G S+ +Y L+
Sbjct: 234 TLLDEKKSPLKPDQKM----YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM 289
Query: 120 EALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIW 179
+ S+ ++ +M ++P + Y + EM+D+G+
Sbjct: 290 SFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 346
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
T + Y ILLD F +G +E + M+ P+ + Y+ ++ Y + + A +
Sbjct: 347 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 406
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ I+ + Y ++I + K ++ + ++++ KM+ G++ N +++ R
Sbjct: 407 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 466
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
++ AL + +M+ G+ PD K ++S Q + + K+
Sbjct: 467 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
W L+ G L + +QGL P + T++ + KW+ + + E +
Sbjct: 73 WRGLMLEIESTGSAVPVLRQYKTDGDQGL-PRDLVLGTLVR-FKQLKKWNLVSEILEWLR 130
Query: 350 SRGNKKYGAV-YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQG 406
+ + + + +L+ +G+ G F AE + L G +PN+ + AL +Y + G
Sbjct: 131 YQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMG--STPNVISYTALMESYGRGG 188
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI---KESGVSPDLV 463
C A + + M+ G EP+ + +++ F ++ EA V+ + K+S + PD
Sbjct: 189 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 248
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
Y ++ + + +++ ++ M G
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSMVGKGV 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
F L AY + G A +VL ++ G PN++ L+ ++ G+ A +++ ++
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM---ETDGCTPDRKAKQML 503
SG P +TY ++K F+ KF E +++ + + PD+K M+
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 253
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 6/323 (1%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
+Y L++ + G+ + + M+ G +P++ Y I+ + + +K+A EV E +
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 244 RERK---ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ K + D +Y+ +I + K G +A K+F M +GV + VT+NSL+ + E
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---E 299
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
Y + ++ MQ + PD + +I G + + FE M G + Y
Sbjct: 300 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 359
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
+L+D F G + A+ ++++ + + + + +AY E A K + ++
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+G EPNIV LI ++ A + M VY ++ SG+ + TT+M A R K F
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS 479
Query: 481 VPIIYKRMETDGCTPDRKAKQML 503
YK ME+ G PD+KAK +L
Sbjct: 480 ALGWYKEMESCGVPPDQKAKNVL 502
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 158/384 (41%), Gaps = 45/384 (11%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG 142
LI+ K GN + A +L+ + +G + SYT L+E+ G G+ + A+ +F+ M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVD---SGIWRTRETYEILLDYFVSAGRLE 199
+P Y I ++D S + ++ Y +++ + AG E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M KG ++ Y+ ++ +K+ +++ ++++ I D Y +I
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+G+ EAL +F +M GVRP +N L+ G +A +F M+ ++
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + T++S Y D+ G AE+
Sbjct: 389 PDLWSYTTMLSA----------------------------YVNASDMEG-------AEKF 413
Query: 380 VQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ +K +G PNI + L YA+ E+ ++V + M GI+ N +L +++A
Sbjct: 414 FKRIKVDG--FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 471
Query: 438 SNAGRYMEAMSVYHHIKESGVSPD 461
+ A+ Y ++ GV PD
Sbjct: 472 GRCKNFGSALGWYKEMESCGVPPD 495
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 145/351 (41%), Gaps = 36/351 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ + G + A ++ +M++ G + S+ +Y +++ + EA+ +F+ ++
Sbjct: 184 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 243
Query: 140 ---YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS-- 194
LKP +Y++ MV G+ ++ TY L+ + S
Sbjct: 244 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK 303
Query: 195 ------------------------------AGRLEDTWSTINEMKMKGFQPNSFVYSKIV 224
A R E+ S EM G +P Y+ ++
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 225 GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
+ +GM ++A V + +R +I D Y +++ + ++ A K F +++ +G
Sbjct: 364 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
PNIVT+ +LIK + + D K + ++ M+ G+ + I TI+ G + +
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 483
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
++ M S G VL+ + + + A+E + +++E + ++
Sbjct: 484 YKEMESCGVPPDQKAKNVLLSLASTQDELEEAKE-LTGIRNETATIIARVY 533
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 125/284 (44%), Gaps = 8/284 (2%)
Query: 61 TLFPNPEAP-RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLI 119
TL ++P +P +++ Y +I K GN ++A + + M G S+ +Y L+
Sbjct: 241 TLLDEKKSPLKPDQKM----YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM 296
Query: 120 EALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIW 179
+ S+ ++ +M ++P + Y + EM+D+G+
Sbjct: 297 SFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 353
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
T + Y ILLD F +G +E + M+ P+ + Y+ ++ Y + + A +
Sbjct: 354 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ I+ + Y ++I + K ++ + ++++ KM+ G++ N +++ R
Sbjct: 414 FKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGR 473
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
++ AL + +M+ G+ PD K ++S Q + + K+
Sbjct: 474 CKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKE 517
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
W L+ G L + +QGL P + T++ + KW+ + + E +
Sbjct: 80 WRGLMLEIESTGSAVPVLRQYKTDGDQGL-PRDLVLGTLVR-FKQLKKWNLVSEILEWLR 137
Query: 350 SRGNKKYGAV-YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQG 406
+ + + + +L+ +G+ G F AE + L G +PN+ + AL +Y + G
Sbjct: 138 YQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMG--STPNVISYTALMESYGRGG 195
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI---KESGVSPDLV 463
C A + + M+ G EP+ + +++ F ++ EA V+ + K+S + PD
Sbjct: 196 KCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQK 255
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
Y ++ + + +++ ++ M G
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFSSMVGKGV 285
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
F L AY + G A +VL ++ G PN++ L+ ++ G+ A +++ ++
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM---ETDGCTPDRKAKQML 503
SG P +TY ++K F+ KF E +++ + + PD+K M+
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 260
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 150/363 (41%), Gaps = 70/363 (19%)
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
GF+ ++YT ++ LG + E + L EM+ G KP
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP--------------------- 392
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
TY L+ + A L++ + N+M+ G +P+ Y ++ +
Sbjct: 393 --------------NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDI 438
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
+ G A ++ + ++E +S DT Y+ II+ GK G L A +LF +M +G PN
Sbjct: 439 HAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
+VT+N +I H + +Y AL L+ DMQ G PD + ++ LG G + + F
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
M + VY +LVD++G+ G A + QA+
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM----------------------- 595
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYT 466
LQ G+ PN+ N L++ F R EA ++ + G+ P L TYT
Sbjct: 596 --------LQ----AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYT 643
Query: 467 TLM 469
L+
Sbjct: 644 LLL 646
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 140/300 (46%)
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+ GF+ + Y+ +VG + + ++L+E+ +T YN +I ++G+ L
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
EA+ +F +MQ+ G P+ VT+ +LI H + G A++++ MQE GL PD + I
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
I+CLG+ G + F M +G + +++ + + ++ A + + +++ G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + G E+A V M+ + P+ + +L++ + AG +A
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
Y + ++G+ P++ T +L+ F+R + E + + M G P + +L T
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCT 650
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 52/302 (17%)
Query: 209 KMKGFQPNSFV-----YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFG 263
+M +Q N + Y+ +G + W K R+ D H Y +++ G
Sbjct: 323 RMDAYQANQVLKQMDNYANALGFF----YWLK--------RQPGFKHDGHTYTTMVGNLG 370
Query: 264 KYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
+ + GE KL +M ++G +PN VT+N LI + R +A+N+F+ MQE G PD
Sbjct: 371 RAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRV 430
Query: 324 IFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
+ T+I + G D ++ M G Y+V+++ G+ G A
Sbjct: 431 TYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHR----- 485
Query: 384 KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRY 443
+FC M G+G PN+V N++I + A Y
Sbjct: 486 ----------LFCE--------------------MVGQGCTPNLVTFNIMIALHAKARNY 515
Query: 444 MEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
A+ +Y ++ +G PD VTY+ +M+ +E ++ M+ PD +L
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 504 QD 505
D
Sbjct: 576 VD 577
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 156/364 (42%), Gaps = 4/364 (1%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G + ++ Y++LI + L AM++ QM+ G + +Y LI+ G
Sbjct: 384 EMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG 443
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
A +++ M GL P Y++ EMV G T+
Sbjct: 444 FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
I++ A E +M+ GFQP+ YS ++ + G ++A V E++ +
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
D +Y ++D +GK G + +A + + M + G+RPN+ T NSL+ R ++A
Sbjct: 564 NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEA 623
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
NL M GL+P + + ++SC + + C + M G+ + ++ + +
Sbjct: 624 YNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAH--MFLLKMPP 681
Query: 367 FGQYGK--FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
G G+ + + + SE + A+ + + GL E+A V ++ G+ +
Sbjct: 682 AGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVY 741
Query: 425 PNIV 428
P+ +
Sbjct: 742 PDAL 745
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 198/478 (41%), Gaps = 38/478 (7%)
Query: 73 EELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEAD 132
E S+ + L+ CC+ +D A+ M+ GF + + H++ L + R A
Sbjct: 151 ETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAW 210
Query: 133 MLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYF 192
+ + +M +K + +NI M GI T TY L+ F
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
GR+E I+EMK KGFQP+ Y+ I+ + G +A+EVL E++E + D+
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDS 327
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNI------------------------- 287
YN +I G+L A +M K+G+ P
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 288 ----------VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
VT+N LI +C+ GD KA L +M G+ P + ++I L + K
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
+ FE + +G K + L+D G A ++ + + +
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
L +G E+A +++ M+ GI+P+ + N LI+ +S G A V + G
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 458 VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERRST 515
+P L+TY L+K + ++ + + + M+++G P+ + + +A++ L+ + +
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKS 625
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E G L S Y+ LI+ C+ G+ +A +L +M G Q + ++YT LI L
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN 446
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+T EAD LF++++ G+KP L + N
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMN----------------------------------- 471
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
L+D + G ++ +S + EM M P+ Y+ ++ G +++A E++ E++ R
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
I D YN++I + K G+ A + +M G P ++T+N+L+K + + A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCL 332
L +M+ +G+ P+ F ++I +
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEAM 617
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 164/351 (46%), Gaps = 5/351 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEA---LGNVGRTSEADMLFK 136
++ +I+ CK G +++A ++ M+ G + SY LI+ LG G+ +AD + K
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
EM+ + P L +NI EM+D + +Y L++ + G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
++ + S ++M G QPN Y+ ++ + N M K+A ++ ++ + T +YN
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
+ID + K G++ + L +M++EG+ P++ T+N LI CR G+ A LF + +
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
GL PD F ++ +G+ + M+ G K Y +++ + + G + A
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 377 EECVQALKSEGVL-VSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
++ E L ++ + L Y+Q+G E A +L M +G+ PN
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 175/388 (45%), Gaps = 39/388 (10%)
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXX 166
G++LS+ S L+ AL R+++ + ++KEMI ++P N++
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQP--NVF---------------- 224
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
T+ ++++ G++ + +MK+ G PN Y+ ++
Sbjct: 225 -----------------TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267
Query: 227 Y---RDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
Y NG KA VL+E+ E +S + +N +ID F K L ++K+F +M + V
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
+PN++++NSLI C G ++A+++ M G+ P+ + +I+ +
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
F S+ +G +Y +L+D + + GK + + ++ EG++ + L
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+ G E A K+ + +G+ P++V ++L+ + G +A + + + G+ P +
Sbjct: 448 RNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETD 491
TY +MK + + + +ME +
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 144/311 (46%), Gaps = 4/311 (1%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
L+ + R D EM + QPN F ++ ++ G KA +V+E+++
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALK---LFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
S + YN++ID + K G G+ K + +M + V PN+ T+N LI ++ +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
++ +F +M +Q + P+ + ++I+ L GK + M S G + Y L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ F + + A + ++K +G + + ++ L +AY + G + + + ME EGI
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
P++ N LI G A ++ + G+ PDLVT+ LM+ + R + + ++
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 485 YKRMETDGCTP 495
K M G P
Sbjct: 493 LKEMSKMGLKP 503
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 8/315 (2%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKM-KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
LD FV G S + + M NS + +V Y +N ++ E +
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
L ++ K + ++ +M + ++PN+ T+N +I C+ G KA
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 307 LNLFSDMQEQGLYPDPKIFVTIIS--C-LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
++ DM+ G P+ + T+I C LG GK + M + +L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGE 421
+D F + + + + + + V PN+ + +L N G +AI + M
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDV--KPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
G++PN++ N LIN F EA+ ++ +K G P Y L+ A+ + K D+
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 482 PIIYKRMETDGCTPD 496
+ + ME +G PD
Sbjct: 421 FALKEEMEREGIVPD 435
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF- 367
++ +M + + P+ F +I+ L + GK + + E M G Y L+D +
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 368 --GQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGI 423
G GK A+ ++ + V SPN+ F L + + + ++KV + M + +
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDV--SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
+PN++ N LIN N G+ EA+S+ + +GV P+L+TY L+ F + E
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 484 IYKRMETDGCTPDRKAKQMLQDALTALER 512
++ ++ G P + ML DA L +
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 37/293 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI K+ NL +M + +M + + SY LI L N G+ SEA + +M+
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P L YN + G T Y +L+D + G+++
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D ++ EM+ +G P+ Y+ ++ NG + A ++ +++ + + D ++ ++
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILM 477
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN----------- 308
+ + + GE +A L +M K G++P +T+N ++K +C+EG+ A N
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 309 -------------------------LFSDMQEQGLYPDPKIFVTIISCLGEQG 336
L ++M E+GL P+ + + + +QG
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 18/243 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI+ CK L A+ + ++ G ++ Y LI+A +G+ + L +EM
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P + YN ++ G+ T+ IL++ + G
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDL-VTFHILMEGYCRKGESR 487
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI-RERKISLDTHIYNSI 258
+ EM G +P Y+ ++ Y G K AT + ++ +ER++ ++ YN +
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ + + G+L +A L +M ++G+ PN +T+ ++K +M +QG
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITY-EIVK---------------EEMVDQGF 591
Query: 319 YPD 321
PD
Sbjct: 592 VPD 594
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 188/424 (44%), Gaps = 7/424 (1%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
KEGNL+ ++L M L S + +I + G S+A+M+ +I GL R+
Sbjct: 614 KEGNLNETKAILNLM--FKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGL--RME 669
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRT--RETYEILLDYFVSAGRLEDTWSTIN 206
I + +G +T + ++D +V G LED +
Sbjct: 670 EETIATLIAVYGRQHKLKEAKRLYLA-AGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFM 728
Query: 207 EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG 266
E KG P + S +V + G ++A + E+ I LDT YN++I + G
Sbjct: 729 ESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAG 788
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
+L A +++ +M GV +I T+N++I + R KA+ +FS+ + GLY D KI+
Sbjct: 789 KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT 848
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
+I G+ GK F M +G K Y ++V I +E +QA++
Sbjct: 849 NMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERN 908
Query: 387 GVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
G + + L YA+ +A K + +++ +GI + + L++A AG EA
Sbjct: 909 GRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEA 968
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDA 506
Y + E+G+SPD T++K ++ ++ + Y++M DR +++D
Sbjct: 969 ERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDL 1028
Query: 507 LTAL 510
A+
Sbjct: 1029 YKAV 1032
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 162/405 (40%), Gaps = 7/405 (1%)
Query: 106 LGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXX 165
L ++ S YT ++ G VG+ A+ F EM+ G +P
Sbjct: 182 LSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSA 241
Query: 166 XXXXXXEMVDSGIWRTRETYEILLDYFVSA---GRLEDTWSTINEMKMKGFQPNSFVYSK 222
+ + I + Y +L G++ D W EM +G PN F Y+
Sbjct: 242 MLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWL---EMVEEGVPPNEFTYTL 298
Query: 223 IVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG 282
+V Y G ++A + E++ + Y+S+I K G+ +A+ L+ M+ +G
Sbjct: 299 VVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358
Query: 283 VRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIK 342
+ P+ T +++ + + +Y KAL+LF+DM+ + D I II G+ G + +
Sbjct: 359 IVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQ 418
Query: 343 KCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAY 402
FE Y + + G A + ++ +K+ + +S + + Y
Sbjct: 419 SMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCY 478
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
A+ + A + + + G+ P+ N ++N ++ +A I V D+
Sbjct: 479 AKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDI 537
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
Y T M+ + + E + +M + D + Q L +++
Sbjct: 538 ELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESM 582
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 136/311 (43%), Gaps = 8/311 (2%)
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPN--SFVYSKIVGLYRDNGMWKKATEVLEEIR 244
++L+ + G L +T + +N M F+ + S ++++ + G KA + + I
Sbjct: 607 LMLNLRLKEGNLNETKAILNLM----FKTDLGSSAVNRVISSFVREGDVSKAEMIADIII 662
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
+ ++ ++I +G+ +L EA +L++ E P S+I + R G
Sbjct: 663 RLGLRMEEETIATLIAVYGRQHKLKEAKRLYLA-AGESKTPGKSVIRSMIDAYVRCGWLE 721
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
A LF + E+G P +++ L +GK + + + + Y L+
Sbjct: 722 DAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLI 781
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ GK Q A E + + + GV S + + + Y + ++AI++ G+
Sbjct: 782 KAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLY 841
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
+ + +I + G+ EA+S++ +++ G+ P +Y ++K ++ EV +
Sbjct: 842 LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDEL 901
Query: 485 YKRMETDG-CT 494
+ ME +G CT
Sbjct: 902 LQAMERNGRCT 912
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 208 MKMK-GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG 266
MK++ ++P+ VY+ ++ LY G K A E E+ E D +++ T+ ++G
Sbjct: 178 MKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWG 237
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
L + +Q+ + + +N ++ ++ + K ++L+ +M E+G+ P+ +
Sbjct: 238 RHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYT 297
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
++S +QG + K F M S G Y+ ++ + + G ++ A + ++S+
Sbjct: 298 LVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQ 357
Query: 387 GVLVSPNIFCA-LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYME 445
G+ V N CA + + Y + +A+ + ME I + V+ ++I + G + +
Sbjct: 358 GI-VPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHD 416
Query: 446 AMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
A S++ + + D TY + + + +
Sbjct: 417 AQSMFEETERLNLLADEKTYLAMSQVHLNS 446
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 121/295 (41%), Gaps = 15/295 (5%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
++ IS+ C E N+ +L + Y LI+A+ G+ A +++ M
Sbjct: 758 AEHISRTCLEKNI---------------ELDTVGYNTLIKAMLEAGKLQCASEIYERMHT 802
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G+ + YN SG++ + Y ++ ++ G++ +
Sbjct: 803 SGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSE 862
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
S +EM+ KG +P + Y+ +V + + + + E+L+ + D Y ++I
Sbjct: 863 ALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQ 922
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+ + + EA K ++++G+ + ++SL+ + G +A + M E G+ P
Sbjct: 923 VYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISP 982
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
D TI+ G + +E M + V +V+ D++ GK Q+
Sbjct: 983 DSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQD 1037
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 308 NLFSDMQEQGLY-PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
+ FS M+ Q Y P ++ ++ G+ GK ++ F M G + ++
Sbjct: 173 DFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCT 232
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
+ ++G+ +A++ +L+S +++ + ++ ++ + I + M EG+ PN
Sbjct: 233 YARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPN 292
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
+++++++ G EA+ + +K G P+ VTY++++ ++ +++ +Y+
Sbjct: 293 EFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYE 352
Query: 487 RMETDGCTP 495
M + G P
Sbjct: 353 DMRSQGIVP 361
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G S + Y+ +IS + LD+A+ + + G L YT++I G G+ SEA
Sbjct: 804 GVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEA 863
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
LF EM G+KP YN+ M +G TY L+
Sbjct: 864 LSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQV 923
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+ + + + TI +K KG + +S ++ GM ++A ++ E IS D
Sbjct: 924 YAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPD 983
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
+ +I+ + G+ + + + KM + V
Sbjct: 984 SACKRTILKGYMTCGDAEKGILFYEKMIRSSV 1015
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 93/514 (18%), Positives = 172/514 (33%), Gaps = 106/514 (20%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ ++S K+G + A+ +M++LGF +Y+ +I G +A L+++M
Sbjct: 296 YTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMR 355
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P +M + I +++ + G
Sbjct: 356 SQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFH 415
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D S E + + Y + ++ ++G KA +V+E ++ R I L Y ++
Sbjct: 416 DAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVML 475
Query: 260 DTFGKYG---------------------------------ELGEALKLFVK-MQKEGVRP 285
+ K LGE K F+K + + V
Sbjct: 476 QCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHF 535
Query: 286 NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI----------------- 328
+I + + ++ +C+EG +A +L M + D + T+
Sbjct: 536 DIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVL 595
Query: 329 ------ISCLG-------EQGKWDTIKKCFESM--TSRGNKKYGAVYAVLVDIFGQYGKF 373
+ LG ++G + K M T G+ V + F + G
Sbjct: 596 NVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRV----ISSFVREGDV 651
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
AE + G+ + L Y +Q ++A K L + GE P ++ +
Sbjct: 652 SKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEA-KRLYLAAGESKTPGKSVIRSM 710
Query: 434 INAF-----------------------------------SNAGRYMEAMSVYHHIKESGV 458
I+A+ +N G++ EA + E +
Sbjct: 711 IDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNI 770
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
D V Y TL+KA + K IY+RM T G
Sbjct: 771 ELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSG 804
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 96/250 (38%), Gaps = 3/250 (1%)
Query: 19 GGALRCSSHA-TAIQFSKIPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSS 77
G L+C+S + S +P S+ + N I + D +F N A R G L
Sbjct: 787 AGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN--ARRSGLYLDE 844
Query: 78 EFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKE 137
+ Y+ +I K G + A+SL ++M+ G + + SY +++ E D L +
Sbjct: 845 KIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQA 904
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
M G L+ Y + + GI + + LL V AG
Sbjct: 905 MERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGM 964
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+E+ T +M G P+S I+ Y G +K E++ + D + +
Sbjct: 965 MEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSV 1024
Query: 258 IIDTFGKYGE 267
+ D + G+
Sbjct: 1025 VEDLYKAVGK 1034
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 145/307 (47%), Gaps = 1/307 (0%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
L+ F G +E+ +MK G +P + Y+ ++ A V E + +
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
I D YN++I + K G+ +A++ M+ G + +T+ ++I+ + D+ +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
L+ +M E+G+ P F +I L ++GK + FE+M +G+K A+Y VL+D +
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G ++A + + EG + + N + G E+A+ +G+ N
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
+ + LI+ AGR EA ++ + E G + D Y L+ AF + +K DE ++KR
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
Query: 488 M-ETDGC 493
M E +GC
Sbjct: 493 MEEEEGC 499
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 153/326 (46%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
E Y L+D A ++ +E+K F + ++ + GM ++ V +
Sbjct: 153 ECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRK 212
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
++E I + YN +++ + A ++F M+ ++P+IVT+N++IK +C+ G
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
KA+ DM+ +G D ++T+I + + ++ M +G + +++
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
++ + GK + + +G + I+ L + YA+ G E AI++L M EG
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVP 482
+P++V ++++N GR EA+ +H + G++ + + Y++L+ + + DE
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 483 IIYKRMETDGCTPDRKAKQMLQDALT 508
+++ M GCT D L DA T
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFT 478
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/428 (19%), Positives = 177/428 (41%), Gaps = 1/428 (0%)
Query: 78 EFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKE 137
E Y L+ ++DR + ++++ F ++ + LI++ G +G E ++++
Sbjct: 153 ECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRK 212
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
M G++P L YN M I TY ++ + AG+
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+ + +M+ +G + + Y ++ + + + +E+ E+ I + H ++
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+I K G+L E +F M ++G +PN+ + LI + + G A+ L M ++G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
PD + +++ L + G+ + F + G Y+ L+D G+ G+ AE
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE-GIEPNIVMLNMLINA 436
+ + +G + AL +A+ + ++AI + + ME E G + + +L++
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
R EA+ ++ + + G++P + L + K I + G D
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 497 RKAKQMLQ 504
+ M+
Sbjct: 573 AACEDMIN 580
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 2/354 (0%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E Y +I C + + ++L +M+ G Q+ ++++ +I L G+ +E
Sbjct: 287 GHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG 346
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+F+ MI G KP + +Y + M+D G TY ++++
Sbjct: 347 YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNG 406
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
GR+E+ + + G NS YS ++ G +A + EE+ E+ + D
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 466
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKM-QKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
++ YN++ID F K+ ++ EA+ LF +M ++EG + T+ L+ +E +AL L+
Sbjct: 467 SYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLW 526
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
M ++G+ P F + + L GK K + + G A +++ +
Sbjct: 527 DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMG-VILDAACEDMINTLCKA 585
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
G+ + A + + G V I + NA + G + A+K++ G G E
Sbjct: 586 GRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYE 639
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 189/442 (42%), Gaps = 11/442 (2%)
Query: 36 IPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDR 95
I +L + N + V D+ +F E+ R ++ + Y+ +I CK G +
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVT--YNTMIKGYCKAGQTQK 275
Query: 96 AMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXX 155
AM L ME G + +Y +I+A L++EM G++ + +++
Sbjct: 276 AMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIG 335
Query: 156 XXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQP 215
M+ G Y +L+D + +G +ED ++ M +GF+P
Sbjct: 336 GLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKP 395
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
+ YS +V NG ++A + R +++++ Y+S+ID GK G + EA +LF
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM-QEQGLYPDPKIFVTIISCLGE 334
+M ++G + +N+LI + +A+ LF M +E+G + ++S + +
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
+ + + K ++ M +G A + L GK A + + L GV++ +
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL--DA 573
Query: 395 FCA-LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH- 452
C + N + G ++A K+ + G E + ++INA G+ AM + H
Sbjct: 574 ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSK 633
Query: 453 ----IKESGVSPDLVTYTTLMK 470
+ G V +TTL++
Sbjct: 634 IGIGYERMGSVKRRVKFTTLLE 655
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 152/337 (45%), Gaps = 1/337 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+M ++GI T TY L++ VSA ++ M+ +P+ Y+ ++ Y G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+KA E L ++ R D Y ++I + G + L+ +M ++G++ ++
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+I C+EG + +F +M +G P+ I+ +I + G + + M
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G K Y+V+V+ + G+ + A + + +G+ ++ + +L + + G ++A
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI-KESGVSPDLVTYTTLMK 470
++ + M +G + N LI+AF+ + EA++++ + +E G + TYT L+
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ + +E ++ M G TP + L L
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 164/393 (41%), Gaps = 4/393 (1%)
Query: 102 QMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXX 161
+ME G YS+T LI R S A + +M+ G +P + +
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 162 XXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYS 221
MV SG Y L+D G L +NEM+ KG + Y+
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 222 KIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE 281
++ +G W A +L ++ +R I+ D + ++ID F K G L EA +L+ +M +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI 341
V PN VT+NS+I C G A F M +G +P+ + T+IS + D
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 342 KKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF--CALA 399
K F+ M+ G Y L+ + Q GK + A + + S V+P+I C L
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR--VTPDIITHCILL 393
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+ G E A+ M IV N++I+ A + +A ++ + GV
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
PD TYT ++ + E + +RM+ +G
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 166/393 (42%)
Query: 111 SSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXX 170
S +T L+ A N+ R ++M G+ L + I
Sbjct: 70 SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129
Query: 171 XEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDN 230
+M+ G + T+ LL F R+ D +S + M G++PN VY+ ++ N
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKN 189
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
G A E+L E+ ++ + D YN+++ G +A ++ M K + P++VT+
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
+LI ++G+ +A L+ +M + + P+ + +II+ L G+ KK F+ M S
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
+G Y L+ F ++ + Q + EG + L + Y Q G
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
A+ + M + P+I+ +L++ G A+ + ++ES +V Y ++
Sbjct: 370 ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIH 429
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
+ K ++ ++ R+ +G PD + ++
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 164/391 (41%), Gaps = 12/391 (3%)
Query: 75 LSSEFYS--QLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEAD 132
+S + YS LI C+ L A+S+L +M LG++ S ++ L+ V R +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 133 MLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYF 192
L M+ G +P + +YN EM G+ TY LL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
+GR D + +M + P+ ++ ++ ++ G +A E+ +E+ + + +
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
YNSII+ +G L +A K F M +G PN+VT+N+LI C+ + + LF
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
M +G D + T+I + GK F M SR + +L+ +G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL-----HGL 396
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC-----EQAIKVLQIMEGEGIEPNI 427
N E +K + + S +A GLC E+A ++ + EG++P+
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
++I G EA + +KE G+
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 139/324 (42%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
+ G E + Y+ LI CK G L+ A+ LL +ME G +Y L+ L GR S
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
+A + ++M+ + P + + EM+ S + TY ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
+ GRL D T + M KG PN Y+ ++ + M + ++ + + +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
D YN++I + + G+L AL +F M V P+I+T L+ C G+ AL
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
F DM+E Y + +I L + K + + F + G K Y +++ +
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 370 YGKFQNAEECVQALKSEGVLVSPN 393
G + A+E ++ +K EG++ N
Sbjct: 469 NGPRREADELIRRMKEEGIICQMN 492
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 192/444 (43%), Gaps = 43/444 (9%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G +S + ++ IS CK + A +L+ + L + + L+ LG S
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM----VDSG--IWRTRETY 185
+ L +M ++P + I +M D G I +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMK-GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
L+D GRL++ + MK++ PN+ Y+ ++ Y G + A EV+ ++
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
E +I + N+I+ ++ L A+ F+ M+KEGV+ N+VT+ +LI C +
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGE-QGKWDTIK--------------------- 342
KA+ + M E G PD KI+ +IS L + + D I+
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 343 ----------KCFESMTS---RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
K +E +T G K Y L+ FG++ F++ E ++ ++ +G+
Sbjct: 554 GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 390 VSPNIFCALANAYAQQGLCEQAIKVLQIME-GEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + A+ +AY G ++A+K+ + M + PN V+ N+LINAFS G + +A+S
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 449 VYHHIKESGVSPDLVTYTTLMKAF 472
+ +K V P++ TY L K
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCL 697
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 136/307 (44%), Gaps = 10/307 (3%)
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK------IS 249
R+ D ++E+K++ P+ ++ + +A EV E++R ++ I
Sbjct: 311 SRMNDLVLKMDEVKIR---PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIK 367
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQ-KEGVRPNIVTWNSLIKWHCREGDYTKALN 308
D+ +N++ID K G L EA +L V+M+ +E PN VT+N LI +CR G A
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFG 368
+ S M+E + P+ TI+ + + F M G K Y L+
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 369 QYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
+ A + + G I+ AL + Q AI+V++ ++ G +++
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
NMLI F + + + +++ G PD +TY TL+ F + K F+ V + ++M
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 489 ETDGCTP 495
DG P
Sbjct: 608 REDGLDP 614
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 32/316 (10%)
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
E + I+ G PNS ++ + N A ++L ++ + K L+ +N++
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ G+ ++ L +KM + +RP++VT LI C+ +AL +F M+ G
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR--GK 358
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
D G K D+I + L+D + G+ + AEE
Sbjct: 359 RTDD----------GNVIKADSIH-----------------FNTLIDGLCKVGRLKEAEE 391
Query: 379 CVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+ +K E V PN + L + Y + G E A +V+ M+ + I+PN+V +N ++
Sbjct: 392 LLVRMKLEERCV-PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
A+ + +++ GV ++VTY TL+ A ++ Y++M GC+PD
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 497 RKAKQMLQDALTALER 512
K L L + R
Sbjct: 511 AKIYYALISGLCQVRR 526
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 165/401 (41%), Gaps = 82/401 (20%)
Query: 83 LISKCCKEGNLDRAMSLLAQM------EALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
LI+ CK +D A+ + QM + + S + LI+ L VGR EA+ L
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
M L+ R V + + TY L+D + AG
Sbjct: 395 RM---KLEERC--------------------------VPNAV-----TYNCLIDGYCRAG 420
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVG-LYRDNGM----------------------- 232
+LE ++ MK +PN + IVG + R +G+
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 233 -----------WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE 281
+KA E++ E S D IY ++I + +A+++ K+++
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI 341
G +++ +N LI C + + K + +DM+++G PD + T+IS G+ ++++
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 342 KKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL--VSPN--IFCA 397
++ E M G Y ++D + G+ +E ++ K G+ V+PN I+
Sbjct: 601 ERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL---DEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
L NA+++ G QA+ + + M+ + + PN+ N L +
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 1/238 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y LI CC N+++AM +M G + Y LI L V R +A + +++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G L YN+ +M G TY L+ +F E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI-RERKISLDTHIYNSI 258
+ +M+ G P Y ++ Y G +A ++ +++ K++ +T IYN +
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
I+ F K G G+AL L +M+ + VRPN+ T+N+L K + L L +M E
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEH 716
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 186/422 (44%), Gaps = 9/422 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y++ I +E + A ++ M+ +GF L ++Y+ I L V + D L +M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + +N+ MV G +Y IL++ AG++
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 200 DTWSTINEMKMKGFQP-NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
D N M G P N + +VGL + V EEI+ ++ L T +YN++
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I F K G + +A L M K G P++VT+N L+ ++ +A + ++M G+
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCF----ESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
D + + L + KC+ + M RG + Y+ L++ F + +
Sbjct: 287 QLDAYSYNQL---LKRHCRVSHPDKCYNFMVKEMEPRGFCDVVS-YSTLIETFCRASNTR 342
Query: 375 NAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
A + ++ +G++++ + +L A+ ++G A K+L M G+ P+ + ++
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCT 494
+ +G +A V++ + E ++PD ++Y +L+ R+ + E +++ M+ C
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC 462
Query: 495 PD 496
PD
Sbjct: 463 PD 464
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 169/433 (39%), Gaps = 46/433 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGF------------------------------- 108
YS+ IS CK D +LL+ ME LGF
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 109 ----QLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXX 164
+ SYT LI L G+ ++A ++ MI G+ P N
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD----NKACAALVVGLCHA 197
Query: 165 XXXXXXXEMVDSGIWRTRE-----TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFV 219
EMV I R Y L+ F AGR+E + + M G +P+
Sbjct: 198 RKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVT 257
Query: 220 YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVK-M 278
Y+ ++ Y DN M K+A V+ E+ I LD + YN ++ + + VK M
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM 317
Query: 279 QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
+ G ++V++++LI+ CR + KA LF +M+++G+ + + ++I +G
Sbjct: 318 EPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS 376
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
KK + MT G Y ++D + G A + + + +L
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
+ + G +AIK+ + M+G+ P+ + +I + A V+ + + G
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Query: 459 SPDLVTYTTLMKA 471
+ D TL+KA
Sbjct: 497 TLDRDVSDTLIKA 509
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 2/280 (0%)
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
+LS+ Y+ LIS CK G +++A +L + M +G + +Y L+ + A+
Sbjct: 217 KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276
Query: 134 LFKEMIYCGLKPRLNLYN-IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYF 192
+ EM+ G++ YN + EM G +Y L++ F
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDV-VSYSTLIETF 335
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
A + EM+ KG N Y+ ++ + G A ++L+++ E +S D
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
Y +I+D K G + +A +F M + + P+ +++NSLI CR G T+A+ LF D
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
M+ + PD F II L K K ++ M +G
Sbjct: 456 MKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 131/314 (41%), Gaps = 2/314 (0%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
R Y + V +G +++ +EM+ ++ SF Y++ +G+ ++ A +
Sbjct: 8 VRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIY 67
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+++ SL Y+ I K + L M+ G P+I +N + CRE
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
A+ F M ++G PD + +I+ L GK + + +M G
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 361 AVLVDIFGQYGKFQNAEECV-QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
A LV K A E V + +KS V +S ++ AL + + + G E+A + M
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
G EP++V N+L+N + + A V + SG+ D +Y L+K R D
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 480 EV-PIIYKRMETDG 492
+ + K ME G
Sbjct: 308 KCYNFMVKEMEPRG 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 4/234 (1%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLA-QMEALGFQLSSYSYTHLIEALGNV 125
E R G +L + Y+QL+ + C+ + D+ + + +ME GF SY+ LIE
Sbjct: 280 EMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRA 338
Query: 126 GRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETY 185
T +A LF+EM G+ + Y +M + G+ R Y
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFY 398
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIR 244
+LD+ +G ++ + N+M P++ Y+ ++ GL R +G +A ++ E+++
Sbjct: 399 TTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCR-SGRVTEAIKLFEDMK 457
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHC 298
++ D + II + +L A K++ +M +G + ++LIK C
Sbjct: 458 GKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 170/380 (44%), Gaps = 39/380 (10%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF---VYSK-IVGLY 227
++++S T +TY +L+ + AG +E + EM+ P + VY+ I GL
Sbjct: 202 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM 261
Query: 228 RDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNI 287
+ G ++A +V + ++ + T YN +I+ +GK + + KL+ +M+ +PNI
Sbjct: 262 KRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 321
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES 347
T+ +L+ REG KA +F +QE GL PD ++ ++ G + F
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 381
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL------------------ 389
M G + A Y ++VD +G+ G +AE + +K G+
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 390 ---------------VSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
V P+ F ++ N Y + G + K+L ME +I N+
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
LIN + AG ++ +KE PD+VT+T+ + A+ R K + + +++ M G
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Query: 493 CTPDRKAKQMLQDALTALER 512
C PD ++L A ++ E+
Sbjct: 562 CAPDGGTAKVLLSACSSEEQ 581
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 194/438 (44%), Gaps = 40/438 (9%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQ---LSSYSYTHLIEAL-GNVGRTSEA 131
+ + Y+ LI C G ++RA +L +M+ + Y IE L G T EA
Sbjct: 211 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA 270
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+F+ M KP T ETY ++++
Sbjct: 271 IDVFQRMKRDRCKP-----------------------------------TTETYNLMINL 295
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+ A + +W EM+ +PN Y+ +V + G+ +KA E+ E+++E + D
Sbjct: 296 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 355
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
++YN++++++ + G A ++F MQ G P+ ++N ++ + R G ++ A +F
Sbjct: 356 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 415
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
+M+ G+ P K + ++S + + + M+ G + V +++++G+ G
Sbjct: 416 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 475
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
+F E+ + +++ + + L N Y + G E+ ++ ++ + P++V
Sbjct: 476 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
I A+S Y++ + V+ + +SG +PD T L+ A ++ ++V + + M
Sbjct: 536 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH-K 594
Query: 492 GCTPDRKAKQMLQDALTA 509
G T +++ +LT
Sbjct: 595 GVTVSSLVPKLMAKSLTV 612
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 139/289 (48%), Gaps = 11/289 (3%)
Query: 228 RDNGMWKKATEVLEEI-RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
R N W V E I R+ D +N +ID +G+ + EA L+V++ + P
Sbjct: 152 RLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPT 211
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC-----LGEQGKWDTI 341
T+ LIK +C G +A + +MQ + P I VT+ + + +G +
Sbjct: 212 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKT-IGVTVYNAYIEGLMKRKGNTEEA 270
Query: 342 KKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALA 399
F+ M K Y ++++++G+ K + + ++S PNI + AL
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ--CKPNICTYTALV 328
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
NA+A++GLCE+A ++ + ++ +G+EP++ + N L+ ++S AG A ++ ++ G
Sbjct: 329 NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE 388
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
PD +Y ++ A+ R + +++ M+ G P K+ +L A +
Sbjct: 389 PDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 170/380 (44%), Gaps = 39/380 (10%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF---VYSK-IVGLY 227
++++S T +TY +L+ + AG +E + EM+ P + VY+ I GL
Sbjct: 180 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM 239
Query: 228 RDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNI 287
+ G ++A +V + ++ + T YN +I+ +GK + + KL+ +M+ +PNI
Sbjct: 240 KRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 299
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES 347
T+ +L+ REG KA +F +QE GL PD ++ ++ G + F
Sbjct: 300 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 359
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL------------------ 389
M G + A Y ++VD +G+ G +AE + +K G+
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 390 ---------------VSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
V P+ F ++ N Y + G + K+L ME +I N+
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
LIN + AG ++ +KE PD+VT+T+ + A+ R K + + +++ M G
Sbjct: 480 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Query: 493 CTPDRKAKQMLQDALTALER 512
C PD ++L A ++ E+
Sbjct: 540 CAPDGGTAKVLLSACSSEEQ 559
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 194/437 (44%), Gaps = 40/437 (9%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYS---YTHLIEAL-GNVGRTSEA 131
+ + Y+ LI C G ++RA +L +M+ + Y IE L G T EA
Sbjct: 189 TEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEA 248
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+F+ M KP T ETY ++++
Sbjct: 249 IDVFQRMKRDRCKP-----------------------------------TTETYNLMINL 273
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+ A + +W EM+ +PN Y+ +V + G+ +KA E+ E+++E + D
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
++YN++++++ + G A ++F MQ G P+ ++N ++ + R G ++ A +F
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
+M+ G+ P K + ++S + + + M+ G + V +++++G+ G
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 453
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
+F E+ + +++ + + L N Y + G E+ ++ ++ + P++V
Sbjct: 454 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
I A+S Y++ + V+ + +SG +PD T L+ A ++ ++V + + M
Sbjct: 514 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH-K 572
Query: 492 GCTPDRKAKQMLQDALT 508
G T +++ +LT
Sbjct: 573 GVTVSSLVPKLMAKSLT 589
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 139/289 (48%), Gaps = 11/289 (3%)
Query: 228 RDNGMWKKATEVLEEI-RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
R N W V E I R+ D +N +ID +G+ + EA L+V++ + P
Sbjct: 130 RLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPT 189
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC-----LGEQGKWDTI 341
T+ LIK +C G +A + +MQ + P I VT+ + + +G +
Sbjct: 190 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEA 248
Query: 342 KKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALA 399
F+ M K Y ++++++G+ K + + ++S PNI + AL
Sbjct: 249 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ--CKPNICTYTALV 306
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
NA+A++GLCE+A ++ + ++ +G+EP++ + N L+ ++S AG A ++ ++ G
Sbjct: 307 NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE 366
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
PD +Y ++ A+ R + +++ M+ G P K+ +L A +
Sbjct: 367 PDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 8/308 (2%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
MV++G T+ L++ GR+ + ++ M +G QP Y I+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
+ A +L ++ E I IYN+IID K G A LF +M +G+ P+++T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
+I CR G +T A L DM E+ + PD F +I+ L ++GK ++ + M RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQ 410
Y ++D F + + +A+ + ++ S+ SP++ F L N Y + +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS--CSPDVVTFSTLINGYCKAKRVDN 234
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
+++ M GI N V LI+ F G A + + + SGV+P+ +T+ +++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 471 AFIRTKKF 478
+ K+
Sbjct: 295 SLCSKKEL 302
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 4/273 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ L++ C EG + +A++L+ +M G Q Y +I L +G T A L +M
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLLSKME 68
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+K + +YN EM D GI+ TY ++D F +GR
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + +M + P+ +S ++ G +A E+ ++ R I T YNS+I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D F K L +A ++ M + P++VT+++LI +C+ + +F +M +G+
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
+ + T+I + G D + M S G
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 134/284 (47%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
+VD + + Y +++ G E + +++M+ + + +Y+ I+ +G
Sbjct: 32 LVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGH 91
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
A + E+ ++ I D Y+ +ID+F + G +A +L M + + P++VT+++
Sbjct: 92 HIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSA 151
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
LI +EG ++A ++ DM +G++P + ++I +Q + + K+ +SM S+
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
++ L++ + + + N E + G++ + + L + + Q G + A
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
+L +M G+ PN + ++ + + +A ++ +++S
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ +I + CK+G+ A +L +M G +Y+ +I++ GR ++A+ L ++M
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
I + P + ++ +M+ GI+ T TY ++D F RL
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLY-----RDNGMWKKATEVLEEIRERKISLDTH 253
D ++ M K P+ +S ++ Y DNGM E+ E+ R I +T
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM-----EIFCEMHRRGIVANTV 252
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
Y ++I F + G+L A L M GV PN +T+ S++ C + + KA + D+
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Query: 314 QE 315
Q+
Sbjct: 313 QK 314
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 114/253 (45%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +I+ CK G+ + A++LL++ME + Y +I+ L G A LF EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P + Y+ +M++ I T+ L++ V G++
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +M +G P + Y+ ++ + A +L+ + + S D ++++I
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + K + +++F +M + G+ N VT+ +LI C+ GD A +L + M G+
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Query: 320 PDPKIFVTIISCL 332
P+ F ++++ L
Sbjct: 284 PNYITFQSMLASL 296
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 39/196 (19%)
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
M E G PD F T+++ L +G+ + M G++ YG +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTII------------ 48
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
N + G E A+ +L ME I+ ++V+ N
Sbjct: 49 ---------------------------NGLCKMGDTESALNLLSKMEETHIKAHVVIYNA 81
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
+I+ G ++ A +++ + + G+ PD++TY+ ++ +F R+ ++ + + + M
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 493 CTPDRKAKQMLQDALT 508
PD L +AL
Sbjct: 142 INPDVVTFSALINALV 157
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 2/315 (0%)
Query: 184 TYEILLDYFVSAGR-LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
T IL+ AGR ++ W +M KG + + V+ +V + D G+ ++A + E
Sbjct: 310 TCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTE 369
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+ ++ I +T +YN+++D + K + E LF +M+ +G++P+ T+N L+ + R
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW-DTIKKCFESMTSRGNKKYGAVYA 361
L +M++ GL P+ K + +IS G K D F M G K Y
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
L+ + G + A + + EG+ S + ++ +A+ + G + +++ ++M E
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
I+ + N L++ F+ G Y+EA V + G+ P ++TY LM A+ R + ++
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKL 609
Query: 482 PIIYKRMETDGCTPD 496
P + K M PD
Sbjct: 610 PQLLKEMAALNLKPD 624
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 138/306 (45%), Gaps = 1/306 (0%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G + S + + L+ C EG + A+ + +ME G + ++ Y L++A E
Sbjct: 339 GVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEV 398
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ LF EM GLKP YNI EM D G+ ++Y L+
Sbjct: 399 EGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISA 458
Query: 192 FVSAGRLEDTWS-TINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
+ ++ D + MK G +P+S Y+ ++ Y +G +KA EE+ + I
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKP 518
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
Y S++D F + G+ G+ ++++ M +E ++ +T+N+L+ ++G Y +A ++
Sbjct: 519 SVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
S+ + GL P + +++ G+ + + + M + K Y+ ++ F +
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRV 638
Query: 371 GKFQNA 376
F+ A
Sbjct: 639 RDFKRA 644
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 3/202 (1%)
Query: 299 REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
R DY L L S++ ++ + D +++ IS L ++D + +E+M
Sbjct: 252 RMADYI--LLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNV 309
Query: 359 VYAVLVDIFGQYGK-FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQI 417
A+L+ + G+ + E + + +GV S ++F L ++ +GL E+A+ +
Sbjct: 310 TCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTE 369
Query: 418 MEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
ME +GI N ++ N L++A++ + E ++ +++ G+ P TY LM A+ R +
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 478 FDEVPIIYKRMETDGCTPDRKA 499
D V + + ME G P+ K+
Sbjct: 430 PDIVETLLREMEDLGLEPNVKS 451
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 35/298 (11%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EMV G TY L+ + A L + + N+M+ G +P+ Y ++ ++ G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
A ++ + ++ +S DT Y+ II+ GK G L A KLF +M +G PN+VT+N
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
++ H + +Y AL L+ DMQ G PD + ++ LG G + + F M +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
VY +LVD++G+ G + A + QA
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA----------------------------- 599
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
M G+ PN+ N L++ F + EA + ++ G+ P L TYT L+
Sbjct: 600 ------MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 140/300 (46%)
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+ GF+ + Y+ +VG + ++L+E+ +T YN +I ++G+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
EA+ +F +MQ+ G +P+ VT+ +LI H + G A++++ MQ GL PD + I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
I+CLG+ G K F M +G Y +++D+ + +QNA + + +++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + G E+A V M+ + P+ + +L++ + AG +A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
Y + +G+ P++ T +L+ F+R K E + + M G P + +L T
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT 655
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G + ++ Y++LI + L+ AM++ QM+ G + +Y LI+ G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
A +++ M GL P Y++ EMVD G TY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
I++D A ++ +M+ GF+P+ YS ++ + G ++A V E++++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
D +Y ++D +GK G + +A + + M G+RPN+ T NSL+ R +A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
L +M GL P + + ++SC + + C + M S G+ +
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAH 678
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 164/325 (50%), Gaps = 1/325 (0%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y + + F + LE + +EM +G +P++ ++ I+ R NG+ K+A E E++
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
D ++ID +G+ G + AL L+ + + E R + VT+++LI+ + G+Y
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
LN++ +M+ G+ P+ I+ +I +G + K ++ + + G + YA LV
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG-EGI 423
+G+ +A + +K +G+ ++ ++ L + A ++A ++ Q M+ E
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC 417
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
+P+ + LI ++ +GR EA + ++E+G P L T++++ + + K+ D+V
Sbjct: 418 DPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Query: 484 IYKRMETDGCTPDRKAKQMLQDALT 508
+ ++ G TPD + L + +T
Sbjct: 478 TFDQVLELGITPDDRFCGCLLNVMT 502
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 2/214 (0%)
Query: 281 EGVRPN--IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
E ++P+ ++ +N +K + D K+ LF +M E+G+ PD F TIISC + G
Sbjct: 167 ETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVP 226
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
+ FE M+S G + A ++D +G+ G A ++E + F L
Sbjct: 227 KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTL 286
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
Y G + + + + M+ G++PN+V+ N LI++ A R +A +Y + +G
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGF 346
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
+P+ TY L++A+ R + D+ IY+ M+ G
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%)
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
+Y V + +F + + +E+ + G+ F + + Q G+ ++A++ + M
Sbjct: 177 LYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM 236
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
G EP+ V + +I+A+ AG A+S+Y + D VT++TL++ + + +
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 479 DEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
D IY+ M+ G P+ L D++ +R
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKR 330
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 35/298 (11%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EMV G TY L+ + A L + + N+M+ G +P+ Y ++ ++ G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
A ++ + ++ +S DT Y+ II+ GK G L A KLF +M +G PN+VT+N
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
++ H + +Y AL L+ DMQ G PD + ++ LG G + + F M +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
VY +LVD++G+ G + A + QA
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA----------------------------- 599
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
M G+ PN+ N L++ F + EA + ++ G+ P L TYT L+
Sbjct: 600 ------MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 140/300 (46%)
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+ GF+ + Y+ +VG + ++L+E+ +T YN +I ++G+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
EA+ +F +MQ+ G +P+ VT+ +LI H + G A++++ MQ GL PD + I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
I+CLG+ G K F M +G Y +++D+ + +QNA + + +++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + G E+A V M+ + P+ + +L++ + AG +A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
Y + +G+ P++ T +L+ F+R K E + + M G P + +L T
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT 655
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G + ++ Y++LI + L+ AM++ QM+ G + +Y LI+ G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
A +++ M GL P Y++ EMVD G TY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
I++D A ++ +M+ GF+P+ YS ++ + G ++A V E++++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
D +Y ++D +GK G + +A + + M G+RPN+ T NSL+ R +A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
L +M GL P + + ++SC + + C + M S G+ +
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAH 678
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 35/298 (11%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EMV G TY L+ + A L + + N+M+ G +P+ Y ++ ++ G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
A ++ + ++ +S DT Y+ II+ GK G L A KLF +M +G PN+VT+N
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
++ H + +Y AL L+ DMQ G PD + ++ LG G + + F M +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
VY +LVD++G+ G + A + QA
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA----------------------------- 599
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
M G+ PN+ N L++ F + EA + ++ G+ P L TYT L+
Sbjct: 600 ------MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 140/300 (46%)
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+ GF+ + Y+ +VG + ++L+E+ +T YN +I ++G+ L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
EA+ +F +MQ+ G +P+ VT+ +LI H + G A++++ MQ GL PD + I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
I+CLG+ G K F M +G Y +++D+ + +QNA + + +++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ + G E+A V M+ + P+ + +L++ + AG +A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
Y + +G+ P++ T +L+ F+R K E + + M G P + +L T
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT 655
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 128/290 (44%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G + ++ Y++LI + L+ AM++ QM+ G + +Y LI+ G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
A +++ M GL P Y++ EMVD G TY
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
I++D A ++ +M+ GF+P+ YS ++ + G ++A V E++++
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
D +Y ++D +GK G + +A + + M G+RPN+ T NSL+ R +A
Sbjct: 569 NWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
L +M GL P + + ++SC + + C + M S G+ +
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAH 678
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 168/377 (44%), Gaps = 37/377 (9%)
Query: 114 SYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM 173
+YT L + LGN + +A +LF+ M+ GLKP +++Y
Sbjct: 146 TYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTS--------------------- 184
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMK-MKGFQPNSFVYSKIVGLYRDNGM 232
L+ + + L+ +ST+ MK + +P+ F ++ ++ G
Sbjct: 185 --------------LISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGR 230
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG-VRPNIVTWN 291
+ ++ E+ + T YN+IID +GK G E + M ++G P++ T N
Sbjct: 231 FDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLN 290
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
S+I + + K + +S Q G+ PD F +I G+ G + + + M R
Sbjct: 291 SIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKR 350
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
Y ++++ FG+ G+ + ++ + +K +GV + +C+L NAY++ GL +
Sbjct: 351 FFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKI 410
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
VL+ + + + N +INA+ AG +Y ++E PD +T+ T++K
Sbjct: 411 DSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 470
Query: 472 FIRTKKFDEVPIIYKRM 488
+ FD V + K+M
Sbjct: 471 YTAHGIFDAVQELEKQM 487
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 34/309 (11%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LIS CCK G D S++ +M LG S+ +Y +I+ G G E + + +MI
Sbjct: 218 FTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMI 277
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G +L ++ T ++ + + +
Sbjct: 278 EDGD----SLPDVC------------------------------TLNSIIGSYGNGRNMR 303
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
S + ++ G QP+ ++ ++ + GM+KK V++ + +R SL T YN +I
Sbjct: 304 KMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVI 363
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+TFGK G + + +F KM+ +GV+PN +T+ SL+ + + G K ++ + +
Sbjct: 364 ETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVV 423
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
D F II+ G+ G T+K+ + M R K +A ++ + +G F +E
Sbjct: 424 LDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQEL 483
Query: 380 VQALKSEGV 388
+ + S +
Sbjct: 484 EKQMISSDI 492
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 13/272 (4%)
Query: 233 WKKATEVLEEIRERK-ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
W+ A ++ +R++ Y + G + +A LF M EG++P I +
Sbjct: 124 WQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYT 183
Query: 292 SLIKWHCREGDYTKALNLFSDMQE-QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
SLI + + KA + M+ PD F +ISC + G++D +K M+
Sbjct: 184 SLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSY 243
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
G Y ++D +G+ G F+ E + + +G + P++ C L + G
Sbjct: 244 LGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSL-PDV-CTLNSIIGSYGNGRN 301
Query: 411 AIKV------LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
K+ Q+M G++P+I N+LI +F AG Y + SV +++ S VT
Sbjct: 302 MRKMESWYSRFQLM---GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVT 358
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
Y +++ F + + +++ ++++M+ G P+
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 390
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 7/289 (2%)
Query: 189 LDYFVSAGRLEDTWSTINEM-KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
LD + R + N + K ++P Y+K+ + + +A+ + E +
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQK-EGVRPNIVTWNSLIKWHCREGDYTKA 306
+ +Y S+I +GK L +A M+ +P++ T+ LI C+ G +
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
++ +M G+ + TII G+ G ++ ++ M G+ L I
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDV--CTLNSI 292
Query: 367 FGQYGKFQN---AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
G YG +N E + GV F L ++ + G+ ++ V+ ME
Sbjct: 293 IGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFF 352
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
V N++I F AGR + V+ +K GV P+ +TY +L+ A+
Sbjct: 353 SLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAY 401
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 5/202 (2%)
Query: 299 REGDYTKALNLFSDMQEQGLY-PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYG 357
+E + AL +F+ +++Q Y P K + + LG + D FE M S G K
Sbjct: 120 KENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTI 179
Query: 358 AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVL 415
VY L+ ++G+ A ++ +KS P++ F L + + G + ++
Sbjct: 180 DVYTSLISVYGKSELLDKAFSTLEYMKSVSD-CKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS-PDLVTYTTLMKAFIR 474
M G+ + V N +I+ + AG + E SV + E G S PD+ T +++ ++
Sbjct: 239 LEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGN 298
Query: 475 TKKFDEVPIIYKRMETDGCTPD 496
+ ++ Y R + G PD
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPD 320
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 189/442 (42%), Gaps = 12/442 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ LI+ CK G +DRA L ME G + +Y+ LI+ G LF + +
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ G+K + +++ M+ GI TY IL+ GR+
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + ++ +G +P+ YS ++ + G + + E++ + D IY ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K G + A++ VKM + +R N+V +NSLI CR + +AL +F M G+
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 320 PDPKIFVTIISC-LGEQGKWDTIK-----KCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
PD F T++ + E +K + F+ M AV V++ + + +
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 588
Query: 374 QNAEECVQAL---KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
++A + L K E +V+ N + Y ++A ++ ++++ PN V L
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYN---TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
+LI+ A+ ++ + E G P+ VTY LM F ++ + +++ M+
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 491 DGCTPDRKAKQMLQDALTALER 512
G +P + ++ D L R
Sbjct: 706 KGISPSIVSYSIIIDGLCKRGR 727
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 195/470 (41%), Gaps = 45/470 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI K G L L +Q G +L ++ I+ G + A +++K M+
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P + Y I +++ G+ + TY L+D F G L
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
++ +M G+ P+ +Y +V G+ A ++ + I L+ ++NS+I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK------WHCREGDYTKALNLFSDM 313
D + + EALK+F M G++P++ T+ ++++ C+ T L LF M
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
Q + D + +I L + + + K F ++ + Y ++ + +
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 374 QNAEECVQALK-------SEGVLVSPNIFC----------------------------AL 398
AE + LK + + + ++ C L
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
+ +++ E + K+ + M+ +GI P+IV +++I+ GR EA +++H ++ +
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
PD+V Y L++ + + + E ++Y+ M +G PD +LQ AL+
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD----DLLQRALS 789
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 35/306 (11%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
++D G T+ L++ F G ++ + M+ +G +P+ YS ++ Y GM
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
++ + + + LD +++S ID + K G+L A ++ +M +G+ PN+VT+
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
LIK C++G +A ++ + ++G+ P + ++I + G + +E M G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
+Y VLVD ++QGL A+
Sbjct: 457 YPPDVVIYGVLVD-----------------------------------GLSKQGLMLHAM 481
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ M G+ I N+V+ N LI+ + R+ EA+ V+ + G+ PD+ T+TT+M+
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 473 IRTKKF 478
I F
Sbjct: 542 IMEDAF 547
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 1/251 (0%)
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
++D GE+ +AL + + G R IV+ N ++K + A L S + + G
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCG 281
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
P+ F T+I+ ++G+ D F+ M RG + Y+ L+D + + G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ +GV + +F + + Y + G A V + M +GI PN+V +LI
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
GR EA +Y I + G+ P +VTY++L+ F + +Y+ M G PD
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 498 KAKQMLQDALT 508
+L D L+
Sbjct: 462 VIYGVLVDGLS 472
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
M + G TY L+D+F + +E ++ EM+ KG P+ YS I+ G
Sbjct: 668 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 727
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
+AT + + + K+ D Y +I + K G L EA L+ M + GV+P+ + +
Sbjct: 728 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRA 787
Query: 293 LIKWH 297
L +++
Sbjct: 788 LSEYN 792
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 165/386 (42%), Gaps = 4/386 (1%)
Query: 111 SSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXX 170
S Y Y L+E+ R L+K+M+ CG+ P+ +N+
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 171 XEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDN 230
EM + G T+ IL+ + AG + +N M+ G PN +Y+ IV +
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE---GV-RPN 286
G + +++E++RE + D +NS I K G++ +A ++F M+ + G+ RPN
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPN 290
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
+T+N ++K C+ G A LF ++E + + + L GK+ + +
Sbjct: 291 SITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLK 350
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
MT +G Y +L+D + G +A+ V +K GV + L + Y G
Sbjct: 351 QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYT 466
+ A +LQ M PN N+L+++ GR EA + + E G D VT
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDG 492
++ + + D+ I K M G
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 192/455 (42%), Gaps = 20/455 (4%)
Query: 44 NLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQM 103
NL IR +S D LF E P G + + + L+ CK G D+ + LL M
Sbjct: 151 NLLIRALCDSSCVDAARELFD--EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 104 EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXX 163
E+ G + Y ++ + GR +++ + ++M GL P + +N
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 164 XXXXXXXXEM-VDSGIWRTRE---TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFV 219
+M +D + R TY ++L F G LED + ++ +
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS 328
Query: 220 YSK-IVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM 278
Y+ + GL R +G + +A VL+++ ++ I + YN ++D K G L +A + M
Sbjct: 329 YNIWLQGLVR-HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 279 QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
++ GV P+ VT+ L+ +C G A +L +M P+ ++ L + G+
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
++ M +G ++VD G+ A E V+ ++ G N L
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN----L 503
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
N+Y GL + ++ +E + P+++ + L+N AGR+ EA +++ + +
Sbjct: 504 GNSYI--GLVDDSL-----IENNCL-PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
PD V Y + F + K + K ME GC
Sbjct: 556 QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 160/373 (42%), Gaps = 35/373 (9%)
Query: 144 KPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWS 203
KP + LYN+ +MV GI T+ +L+ + ++
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 204 TINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFG 263
+EM KG +PN F + +V Y G+ K E+L + + + IYN+I+ +F
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 264 KYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ--EQGLYPD 321
+ G ++ K+ KM++EG+ P+IVT+NS I C+EG A +FSDM+ E P
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 322 PKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQ 381
P S+T Y +++ F + G ++A+ +
Sbjct: 289 PN-----------------------SIT----------YNLMLKGFCKVGLLEDAKTLFE 315
Query: 382 ALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAG 441
+++ L S + + G +A VL+ M +GI P+I N+L++ G
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 442 RYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQ 501
+A ++ +K +GV PD VTY L+ + K D + + M + C P+
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 502 MLQDALTALERRS 514
+L +L + R S
Sbjct: 436 ILLHSLWKMGRIS 448
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 175/427 (40%), Gaps = 27/427 (6%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEA---LGF-QLSSYSYTHLIEALGNVGRTSEADMLF 135
++ IS CKEG + A + + ME LG + +S +Y +++ VG +A LF
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 136 KEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
+ + L YNI +M D GI + +Y IL+D
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
G L D + + MK G P++ Y ++ Y G A +L+E+ + +
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC 434
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N ++ + K G + EA +L KM ++G + VT N ++ C G+ KA+ + M+
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 316 QG-----------------------LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
G PD + T+++ L + G++ K F M
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
+ Y + + F + GK +A ++ ++ +G S + +L + +
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
++ M+ +GI PNI N I + +A ++ + + ++P++ ++ L++AF
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 473 IRTKKFD 479
+ FD
Sbjct: 675 CKVPDFD 681
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 167/401 (41%), Gaps = 28/401 (6%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y L+ C G +D A SLL +M ++Y+ L+ +L +GR SEA+ L ++M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 140 -----------------YCG---LKPRLNLYN---IXXXXXXXXXXXXXXXXXXXEMVDS 176
CG L + + + ++++
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
TY LL+ AGR + + EM + QP+S Y+ + + G A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
VL+++ ++ YNS+I G ++ E L +M+++G+ PNI T+N+ I++
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
C A NL +M ++ + P+ F +I + +D ++ FE+ S +K
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE 698
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
G +Y+++ + G+ A E ++A+ G + ++ L + ++ E A +L
Sbjct: 699 G-LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILH 757
Query: 417 IM--EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
M G G +P +M +I+ G EA S + E
Sbjct: 758 KMIDRGYGFDPAALM--PVIDGLGKMGNKKEANSFADKMME 796
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 183/428 (42%), Gaps = 9/428 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS +I+ K+G L+ A+SLL +ME + ++Y +I+ L G+ A L KEM
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 461
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++ + + +MV G+ + Y L+D F G E
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEE 521
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK----KATEVLEEIRERKISLDTHIY 255
+ EM+ +G + Y+ ++ +GM K A + +RE+ I D +
Sbjct: 522 AALAWAEEMQERGMPWDVVSYNVLI-----SGMLKFGKVGADWAYKGMREKGIEPDIATF 576
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N ++++ K G+ LKL+ KM+ G++P++++ N ++ C G +A+++ + M
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
++P+ + + + + D I K E++ S G K VY L+ + G +
Sbjct: 637 MEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKK 696
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
A + +++ G + F +L + Y +A+ +M GI PN+ N +I
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Query: 436 AFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
S+AG E +K G+ PD TY L+ + IY M DG P
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
Query: 496 DRKAKQML 503
+L
Sbjct: 817 KTSTYNVL 824
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 185/420 (44%), Gaps = 14/420 (3%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +IS C+ G D A L++M +G + SY LI+ VG A L E+
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI- 222
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
LNL +MV SG T+ +++ G++
Sbjct: 223 -----SELNLIT-HTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ + EM+ PN Y+ +V L++ N +++ A + ++ R I +D +Y +
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN-IYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+D K G+L EA K F + ++ PN+VT+ +L+ C+ GD + A + + M E+ +
Sbjct: 336 MDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV 395
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + ++I+ ++G + M + G Y ++D + GK + A E
Sbjct: 396 IPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIE 455
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ ++ GV + I AL N + G ++ +++ M +G+ + + LI+ F
Sbjct: 456 LSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFF 515
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI--IYKRMETDGCTPD 496
G A++ ++E G+ D+V+Y L+ + KF +V YK M G PD
Sbjct: 516 KGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML---KFGKVGADWAYKGMREKGIEPD 572
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 162/407 (39%), Gaps = 44/407 (10%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G L Y+ LI K G+ + A++ +M+ G SY LI + G+ A
Sbjct: 499 GVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-A 557
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
D +K M G++P + +NI +M GI + + I++
Sbjct: 558 DWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGM 617
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL----EEIRERK 247
G++E+ +N+M + PN Y ++ D K + + E +
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTYR----IFLDTSSKHKRADAIFKTHETLLSYG 673
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
I L +YN++I T K G +A + M+ G P+ VT+NSL+ + KAL
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+ +S M E G+ P+ + TII L + G + K M SRG + Y L+
Sbjct: 734 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 793
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G + S I+C M +G+ P
Sbjct: 794 AKIGNMKG---------------SMTIYCE--------------------MIADGLVPKT 818
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
N+LI+ F+N G+ ++A + + + GVSP+ TY T++ +
Sbjct: 819 STYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 174/422 (41%), Gaps = 11/422 (2%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLL-AQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLF 135
S ++ LI + G + +SL+ ++M A G ++ LI + VGR S A L
Sbjct: 93 SRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL 152
Query: 136 KEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
+ + + YN EMV GI +Y L+D F
Sbjct: 153 RNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKV 209
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
G + ++E+ ++ + S L+ E ++ D +
Sbjct: 210 GNFVRAKALVDEISELNLITHTILLSSYYNLH-------AIEEAYRDMVMSGFDPDVVTF 262
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
+SII+ K G++ E L +M++ V PN VT+ +L+ + Y AL L+S M
Sbjct: 263 SSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVV 322
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
+G+ D ++ ++ L + G +K F+ + Y LVD + G +
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
AE + + + V+ + + ++ N Y ++G+ E+A+ +L+ ME + + PN +I+
Sbjct: 383 AEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVID 442
Query: 436 AFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
AG+ A+ + ++ GV + L+ R + EV + K M + G T
Sbjct: 443 GLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
Query: 496 DR 497
D+
Sbjct: 503 DQ 504
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 133/324 (41%), Gaps = 11/324 (3%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM-WKKATEVLEEI 243
+ L ++S RL T++ M G P+S +++ ++ + NG+ + + + ++
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+S D N +I +F K G L A+ L ++ + + VT+N++I C G
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLA 177
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+A S+M + G+ PD + T+I + G + K + ++ +
Sbjct: 178 DEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI----- 232
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ Y EE + + G F ++ N + G + +L+ ME +
Sbjct: 233 --LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
PN V L+++ A Y A+++Y + G+ DLV YT LM + E
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 484 IYKRMETDGCTPDRKAKQMLQDAL 507
+K + D P+ L D L
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGL 374
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 4/326 (1%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
M GI+RT E + ++ + AG+L D + M+ G +PN + + + ++
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
+KA LE ++ I + YN +I + + EA++L M +G P+ V++ +
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 293 LIKWHCREGDYTKALNLFSDM-QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
++ + C+E + +L M +E GL PD + T+I L + D + +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCE 409
G + Y+ +V + G+ A++ + + S+G P++ + A+ N + + G +
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG-HCPPDVVTYTAVVNGFCRLGEVD 471
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A K+LQ+M G +PN V L+N G+ +EA + + +E SP+ +TY+ +M
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM 531
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTP 495
R K E + + M G P
Sbjct: 532 HGLRREGKLSEACDVVREMVLKGFFP 557
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 167/385 (43%), Gaps = 6/385 (1%)
Query: 99 LLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXX 158
+L M+ G + +++ ++ + G+ +A + M G++P L + N
Sbjct: 229 VLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFV 288
Query: 159 XXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF 218
M GI TY ++ + R+E+ + +M KG P+
Sbjct: 289 RANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKV 348
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEI-RERKISLDTHIYNSIIDTFGKYGELGEALKLFVK 277
Y I+G + ++++++ +E + D YN++I K+ EAL
Sbjct: 349 SYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKD 408
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG-LYPDPKIFVTIISCLGEQG 336
Q++G R + + +++++ C+EG ++A +L ++M +G PD + +++ G
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
Query: 337 KWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN--I 394
+ D KK + M + G+K Y L++ + GK A E + SE SPN
Sbjct: 469 EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNM--SEEHWWSPNSIT 526
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
+ + + ++G +A V++ M +G P V +N+L+ + GR EA
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFD 479
G + ++V +TT++ F + + D
Sbjct: 587 NKGCAINVVNFTTVIHGFCQNDELD 611
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 169/428 (39%), Gaps = 2/428 (0%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
R G + E +S+++ + G L A+ +L M+ G + + I+ R
Sbjct: 235 RRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLE 294
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
+A + M G+ P + YN +M G + +Y ++
Sbjct: 295 KALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM 354
Query: 190 DYFVSAGRLEDTWSTINEM-KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKI 248
Y R+ + + +M K G P+ Y+ ++ + + +A L++ +E+
Sbjct: 355 GYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGF 414
Query: 249 SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG-VRPNIVTWNSLIKWHCREGDYTKAL 307
+D Y++I+ K G + EA L +M +G P++VT+ +++ CR G+ KA
Sbjct: 415 RIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAK 474
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
L M G P+ + +++ + GK ++ Y+V++
Sbjct: 475 KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 534
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ GK A + V+ + +G P L + + G +A K ++ +G N+
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 594
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
V +I+ F A+SV + D+ TYTTL+ + + E + K+
Sbjct: 595 VNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKK 654
Query: 488 METDGCTP 495
M G P
Sbjct: 655 MLHKGIDP 662
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 157/397 (39%), Gaps = 6/397 (1%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGF-QLSSYSYTHLIEALGNV 125
+A G + YS ++ CKEG + A L+ +M + G +YT ++ +
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 126 GRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRE-T 184
G +A L + M G KP Y M + W T
Sbjct: 468 GEVDKAKKLLQVMHTHGHKPNTVSYT-ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y +++ G+L + + EM +KGF P + ++ +G +A + +EE
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
+ +++ + ++I F + EL AL + M ++ T+ +L+ ++G
Sbjct: 587 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
+A L M +G+ P P + T+I + GK D + E M SR +K +Y ++
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVI 704
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ GK + A+ + + AL Y ++G+ A KV M +
Sbjct: 705 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLI 764
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG-VSP 460
P++ M L G+ EA + + E G +SP
Sbjct: 765 PDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISP 801
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 134/322 (41%), Gaps = 38/322 (11%)
Query: 179 WRTRE---TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK 235
WR R Y +L+ + + + MK +G +S+++ Y G +
Sbjct: 201 WRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRD 260
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
A +VL ++ + + I N+ ID F + L +AL+ +MQ G+ PN+VT+N +I+
Sbjct: 261 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 320
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
+C +A+ L DM +G PD + TI+ L ++ + ++ + M
Sbjct: 321 GYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA------ 374
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
K G++ + L + + ++A+ L
Sbjct: 375 ----------------------------KEHGLVPDQVTYNTLIHMLTKHDHADEALWFL 406
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG-VSPDLVTYTTLMKAFIR 474
+ + +G + + + +++A GR EA + + + G PD+VTYT ++ F R
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 466
Query: 475 TKKFDEVPIIYKRMETDGCTPD 496
+ D+ + + M T G P+
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPN 488
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 74/139 (53%)
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
VY ++++ + Q + + +K G+ +P F + +Y++ G A+KVL +M
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
+ G+EPN+++ N I+ F A R +A+ ++ G+ P++VTY +++ + +
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRV 328
Query: 479 DEVPIIYKRMETDGCTPDR 497
+E + + M + GC PD+
Sbjct: 329 EEAIELLEDMHSKGCLPDK 347
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 6/213 (2%)
Query: 300 EGDYTKALNLFSDMQEQGLY-PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
+ D AL F Q Y DP ++ +++ L + ++ M RG +
Sbjct: 184 QDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPE 243
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQ 416
++ ++ + + G+ ++A + + ++ GV PN+ + + + E+A++ L+
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGV--EPNLLICNTTIDVFVRANRLEKALRFLE 301
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M+ GI PN+V N +I + + R EA+ + + G PD V+Y T+M + K
Sbjct: 302 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 477 KFDEVPIIYKRMETD-GCTPDRKAKQMLQDALT 508
+ EV + K+M + G PD+ L LT
Sbjct: 362 RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 1/203 (0%)
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
M+ +G+Y P+ F ++ G+ K M G + + +D+F + +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
+ A ++ ++ G++ + + + Y E+AI++L+ M +G P+ V
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 433 LINAFSNAGRYMEAMSVYHHI-KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
++ R +E + + KE G+ PD VTY TL+ + DE K +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 492 GCTPDRKAKQMLQDALTALERRS 514
G D+ + AL R S
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMS 435
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 150/308 (48%), Gaps = 6/308 (1%)
Query: 174 VDSGIWRTR-ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
VDSG+ TY L+ G++++ + ++ +GF+ + YS + Y G
Sbjct: 198 VDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGA 257
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
A E+ E+ ++ D Y+ +ID K G + EAL L KM KEGV PN++T+ +
Sbjct: 258 LVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTA 317
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
+I+ C+ G +A LF+ + G+ D ++VT+I + +G + M RG
Sbjct: 318 IIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG 377
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
+ Y +++ G+ A+E S+GV+ + L ++Y + + +
Sbjct: 378 IQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVL 432
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
++ + I ++VM N+L+ AF G Y EA ++Y + E ++PD TY T++K +
Sbjct: 433 EIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Query: 473 IRTKKFDE 480
+T + +E
Sbjct: 493 CKTGQIEE 500
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 203/516 (39%), Gaps = 100/516 (19%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E+ Y LI C++GNL+RA S+L ME G Q S +Y +I L GR SEA
Sbjct: 342 GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Query: 132 DMLFKEMI-----YCGLKPR-------------------------LNLYNIXXXXXXXXX 161
D + K ++ Y L L + NI
Sbjct: 402 DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMG 461
Query: 162 XXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYS 221
M + + TY ++ + G++E+ NE++ K + Y+
Sbjct: 462 AYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYN 520
Query: 222 KIVGLYRDNGMWKKATEVLEEIRERKISLDTH---------------------------- 253
+I+ GM ATEVL E+ E+ + LD H
Sbjct: 521 RIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQL 580
Query: 254 -------IYNSIIDTFGKYGELGEALKLFVKMQKEGVRP--------------------- 285
+ N I K G A+++++ M+++G+
Sbjct: 581 NSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYL 640
Query: 286 -------------NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
+++ + +I C+EG KALNL S + +G+ + + ++I+ L
Sbjct: 641 LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGL 700
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
+QG + F+S+ + G Y +L+D + G F +AE+ + ++ S+G++ +
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
I+ ++ + Y + G E A++V+ + P+ ++ +I + G EA+SV+
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
K+ +S D + L+K F + +E + + M
Sbjct: 821 FKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 191/524 (36%), Gaps = 100/524 (19%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E FYS I K G L A+ +M G SY+ LI+ L G EA
Sbjct: 237 GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEA 296
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
L +MI G++P L Y ++ GI Y L+D
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDG 356
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV------------ 239
G L +S + +M+ +G QP+ Y+ ++ G +A EV
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYS 416
Query: 240 --------------LEEIRER----KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE 281
+ EIR R KI +D + N ++ F G GEA L+ M +
Sbjct: 417 TLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEM 476
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI 341
+ P+ T+ ++IK +C+ G +AL +F+++++ + + II L ++G DT
Sbjct: 477 DLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTA 535
Query: 342 -------------------KKCFESMTSRGNKK--YGAVYAV--------------LVDI 366
+ S+ + G K G VY + + +
Sbjct: 536 TEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL 595
Query: 367 FGQYGKFQNAEECVQALKSEGVLVS-PNI------------------------------- 394
+ G F+ A E ++ +G+ V+ P+
Sbjct: 596 LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDV 655
Query: 395 --FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
+ + N ++G +A+ + + G+ N + N LIN G +EA+ ++
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDS 715
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
++ G+ P VTY L+ + F + + M + G P+
Sbjct: 716 LENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN 759
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 189/465 (40%), Gaps = 46/465 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI KEGN++ A+ LL +M G + + +YT +I L +G+ EA +LF ++
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 339
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++ LY +M GI + TY +++ AGR+
Sbjct: 340 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +E+ KG + YS ++ Y E+ E KI +D + N ++
Sbjct: 400 EA----DEVS-KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILL 454
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F G GEA L+ M + + P+ T+ ++IK +C+ G +AL +F+++++ +
Sbjct: 455 KAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS 514
Query: 320 PDPKIFVTIISCLGEQGKWDTI-------------------KKCFESMTSRGNKK--YGA 358
+ II L ++G DT + S+ + G K G
Sbjct: 515 A-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGL 573
Query: 359 VYAV--------------LVDIFGQYGKFQNAEECVQALKSEGVLVS--PNIFCALANAY 402
VY + + + + G F+ A E ++ +G+ V+ I L +
Sbjct: 574 VYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL 633
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
+ + V+ E +++ ++IN G ++A+++ K GV+ +
Sbjct: 634 RS---LDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNT 690
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+TY +L+ + E ++ +E G P +L D L
Sbjct: 691 ITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNL 735
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 182/440 (41%), Gaps = 18/440 (4%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSY-SYTHLIEALGNVGRTSEADMLFKEMI 139
S +IS CK G + A+ G + + +YT L+ AL +G+ E L + +
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G + Y+ EMV+ G+ R +Y IL+D G +E
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + +M +G +PN Y+ I+ G ++A + I I +D +Y ++I
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D + G L A + M++ G++P+I+T+N++I C G ++A D +G+
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVV 409
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
D + T++ + D + + + +L+ F G + A+
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+A+ + + + Y + G E+A+++ + + V N +I+A
Sbjct: 470 YRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCK 528
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE--VPIIY--KRMETDGCTP 495
G A V + E G+ D+ T TL+ + I D+ + ++Y +++ +D C
Sbjct: 529 KGMLDTATEVLIELWEKGLYLDIHTSRTLLHS-IHANGGDKGILGLVYGLEQLNSDVCLG 587
Query: 496 DRKAKQMLQDALTALERRST 515
ML DA+ L +R +
Sbjct: 588 ------MLNDAILLLCKRGS 601
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 43/318 (13%)
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS--LDTHIYNSIIDTFGKY 265
++ G P+S + ++ + + G A EVLE + + ++ D + +++I F K
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 266 GELGEALKLFVKMQKEGVR-PNIVTWNSLIKWHCREGDYTKALNLF-------------- 310
G+ AL F GV PN+VT+ +L+ C+ G + +L
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 311 ---------------------SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+M E+G+ D + +I L ++G + M
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
G + Y ++ + GK + A + S G+ V ++ L + ++G
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A +L ME GI+P+I+ N +IN AGR EA V GV D++TY+TL+
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLL 419
Query: 470 KAFIRTKKFDEVPIIYKR 487
++I+ + D V I +R
Sbjct: 420 DSYIKVQNIDAVLEIRRR 437
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 249 SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN 308
S+D Y II+ K G L +AL L + GV N +T+NSLI C++G +AL
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFG 368
LF ++ GL P + +I L ++G + +K +SM S+G +Y +VD +
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 369 QYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
+ G+ ++A V K G V+P+ F ++ Y ++G E+A+ V + + I +
Sbjct: 772 KLGQTEDAMRVVSR-KMMG-RVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
LI F GR EA + ++E VS +V
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGL---LREMLVSESVV 863
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 123/307 (40%), Gaps = 41/307 (13%)
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLF-VKMQKEGVRPNIVTWNSLIK-WHCR 299
++ ++I+++ IY+ + F +A K + + K + P +SLI +
Sbjct: 51 QLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSIT 110
Query: 300 EGDYTKALNLFSD-MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR------- 351
D +K L + D ++ G +P F ++I E+G+ D + E MT++
Sbjct: 111 RDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFD 170
Query: 352 ---------GNKKYG----------------------AVYAVLVDIFGQYGKFQNAEECV 380
G K G Y LV Q GK + V
Sbjct: 171 NFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLV 230
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+ L+ EG + + Y + G A+ + M +G+ ++V ++LI+ S
Sbjct: 231 RRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKE 290
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAK 500
G EA+ + + + GV P+L+TYT +++ + K +E +++ R+ + G D
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 501 QMLQDAL 507
L D +
Sbjct: 351 VTLIDGI 357
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 11/243 (4%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y I+++ G L + + K +G N+ Y+ ++ G +A + + +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
+ Y +ID K G +A KL M +G+ PNI+ +NS++ +C+ G
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
A+ + S + PD ++I ++G + F + + L+
Sbjct: 778 DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
Query: 365 DIFGQYGKFQNAEECV-QALKSEGVLVSPN-IFCALANAYAQQG----LCE-----QAIK 413
F G+ + A + + L SE V+ N + LA + + +G LCE QAIK
Sbjct: 838 KGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIK 897
Query: 414 VLQ 416
+L
Sbjct: 898 ILD 900
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 172/407 (42%), Gaps = 1/407 (0%)
Query: 91 GNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLY 150
G L+ A+ ++ M+ G SS + ++E +G A+ +F EM G+ P + Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 151 NIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKM 210
+ M+ G T ++L G + +M
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 211 KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE 270
GF+PN ++ ++ G K+A E+LEE+ + + + ++ID K G +
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 271 ALKLFVKM-QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTII 329
A +LF+K+ + + +PN+ T+ S+I +C+E +A LFS M+EQGL+P+ + T+I
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 330 SCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
+ + G + + M G Y +D + + A E + S G+
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 390 VSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSV 449
+ L +Q QA+ M G E ++ + N+LI AF + E+ +
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 450 YHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ + G+ P TYT+++ + + D + M+ GC PD
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 174/420 (41%), Gaps = 36/420 (8%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
S Y ++ C ++G + A L M GF + + T ++ AL G + A F+
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
+MI G KP NL N + L+D G
Sbjct: 277 KMIDLGFKP--NLIN---------------------------------FTSLIDGLCKKG 301
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV-LEEIRERKISLDTHIY 255
++ + + EM G++PN + ++ ++ G +KA + L+ +R + H Y
Sbjct: 302 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY 361
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
S+I + K +L A LF +M+++G+ PN+ T+ +LI HC+ G + +A L + M +
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 421
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
+G P+ + I L ++ + + S G + G Y +L+ +
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
A + G + L A+ +Q +++ ++ Q++ G+ P +I+
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 436 AFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
+ G A+ +H++K G PD TY +L+ + DE +Y+ M G +P
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 147/338 (43%), Gaps = 3/338 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYS-KIVGLYRDN 230
+M + G+ + T +L+ V G +E + +EM ++G P+S Y ++G +RD
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRD- 230
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
G ++A L + +R D I+ + G + A+ F KM G +PN++ +
Sbjct: 231 GKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINF 290
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
SLI C++G +A + +M G P+ +I L ++G + + F +
Sbjct: 291 TSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 350
Query: 351 RGNKKYGA-VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
K Y ++ + + K AE +K +G+ + N + L N + + G
Sbjct: 351 SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A +++ +M EG PNI N I++ R EA + + G+ D VTYT L+
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ + ++ + RM G D + +L A
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 168/410 (40%), Gaps = 4/410 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI CK+G++ +A +L +M G++ + Y++T LI+ L G T +A LF +++
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 140 YCG-LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
KP ++ Y M + G++ TY L++ AG
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ +N M +GF PN + Y+ + +A E+L + + D Y +
Sbjct: 410 GRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTIL 469
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I K ++ +AL F +M K G ++ N LI CR+ ++ LF + GL
Sbjct: 470 IQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P + + ++ISC ++G D K F +M G Y L+ + A +
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+A+ G+ LA Y ++ A+ +L+ ++ + I + L+
Sbjct: 590 LYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---IRTVRTLVRKLC 646
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
+ + A + + E S D VT A + K + V + +R+
Sbjct: 647 SEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERI 696
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 186/427 (43%), Gaps = 9/427 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ ++ C K G+L+R + +M+ + S +Y LI G+ EA +M
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G +N EM+++GI+ T TY I + GR++
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D ++ M P+ Y+ ++ Y G + +A+ + +++R I YN++I
Sbjct: 361 DARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D + G L A +L +M + + P+++T+ +L+K + G+ + A ++ +M +G+
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 320 PDPKIFVTIISCLGE--QGKWDTIKKCFESMTSRGNKKYG-AVYAVLVDIFGQYGKFQNA 376
PD + T +GE G D + E M + + +Y V +D + G A
Sbjct: 477 PDGYAYTT--RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
E + + G++ + + Y + G + A + M + + P+++ +LI
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ AGR +A +K+ GV P+++T+ L+ + DE +ME +G P+
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
Query: 497 RKAKQML 503
+ + ML
Sbjct: 655 KYSYTML 661
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 179/420 (42%), Gaps = 13/420 (3%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
R G ++ ++ LI CK+G D A + +M G ++ +Y I AL + GR
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
+A +E++ P + YN ++ I + TY L+
Sbjct: 361 DA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
D +G LE EM + P+ Y+ +V + NG ATEV +E+ + I
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKM-QKEGVRPNIVTWNSLIKWHCREGDYTKALN 308
D + Y + + G+ +A +L +M + P++ +N I C+ G+ KA+
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFG 368
+ GL PD + T+I E G++ + ++ M + + Y +V V I+G
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK--RLYPSVITYFVLIYG 594
Query: 369 --QYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ G+ + A + +K GV PN+ AL + G ++A + L ME EGI
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGV--RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
PN MLI+ + ++ E + +Y + + + PD T+ L K + + EV +
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFL 712
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 4/293 (1%)
Query: 204 TINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFG 263
+ +M KGF P+ + ++ + RD+ M KA+ V E + E I +N+++D+
Sbjct: 190 SFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 264 KYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
K G+L K++++M++ + + VT+N LI + G +A DM+ G P
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 324 IFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
F +I +QG +D + M + G + Y + + +G+ +A E + ++
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 384 KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRY 443
+ V VS N L + Y + G +A + + I P+IV N LI+ +G
Sbjct: 370 AAPDV-VSYN---TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 444 MEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
A + + + PD++TYTTL+K F++ +Y M G PD
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 141/363 (38%), Gaps = 40/363 (11%)
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
F++MI G P + NI M++ GI T T+ +LD
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHI 254
AG LE R + +W E++ R I
Sbjct: 251 AGDLE----------------------------RVDKIWL-------EMKRRNIEFSEVT 275
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
YN +I+ F K G++ EA + M++ G ++N LI+ +C++G + A + +M
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
G+YP + I L + G+ D ++ SM + Y L+ + + GKF
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNT----LMHGYIKMGKFV 391
Query: 375 NAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
A L++ + S + L + + G E A ++ + M + I P+++ L+
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM-ETDGC 493
F G A VY + G+ PD YTT +R D+ +++ M TD
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511
Query: 494 TPD 496
PD
Sbjct: 512 APD 514
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
F KM ++G P++ N ++K KA ++ M E G+ P F T++ +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
G + + K + M R + Y +L++ F + GK + A ++ G V+P
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
F L Y +QGL + A V M GI P N+ I A + GR +A +
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELL 366
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
S +PD+V+Y TLM +I+ KF E +++ + P L D L
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 189/428 (44%), Gaps = 1/428 (0%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLS-SYSYTHLIEALGNVGRTSE 130
G E S ++ CK G + A ++ Q E GF + S YT +IEA G +
Sbjct: 711 GCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQK 770
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
A+ + + G P L +N M+ G T E+ ILL
Sbjct: 771 AESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLH 830
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
GRLE+ + + E++ GF+ + ++ + G + ++ ++
Sbjct: 831 ALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLP 890
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
+Y +I+ K + +A + +M++ + + WNS++K + DY K + ++
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
++E GL PD + T+I + + + M + G Y L+ FG+
Sbjct: 951 QRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQ 1010
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
+ AE+ + L S+G+ + + + + G +A K+LQ+M+ GIEP + +
Sbjct: 1011 KCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATM 1070
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
++L+ ++S++G EA V ++K++ V + Y++++ A++R+K ++ M+
Sbjct: 1071 HLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKK 1130
Query: 491 DGCTPDRK 498
+G PD +
Sbjct: 1131 EGLEPDHR 1138
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 187/416 (44%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
S Y+ +I K+ +A S++ + G ++ L+ A G A +F
Sbjct: 752 SPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFN 811
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
M+ G P + NI E+ D G ++ + ++LD F AG
Sbjct: 812 TMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAG 871
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
+ + + MK G+ P +Y ++ L + A ++ E+ E ++ I+N
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
S++ + + + ++++ ++++ G+ P+ T+N+LI +CR+ + L M+
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
GL P + ++IS G+Q + ++ FE + S+G K + Y ++ I G A
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
E+ +Q +K+ G+ + L +Y+ G ++A KVL ++ +E + + +I+A
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
+ + Y + +K+ G+ PD +T ++A +K+ EV ++ K +E G
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIG 1167
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 143/292 (48%), Gaps = 3/292 (1%)
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE--ALKLFV 276
VY+ ++G+Y +G + KA E+++ +R+R D +N++I+ K G L A++L
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 277 KMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQG 336
++ G+RP+ +T+N+L+ R+ + A+ +F DM+ PD + +IS G G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 337 KWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC 396
++ F + +G Y L+ F + + +E Q ++ G +
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 397 ALANAYAQQGLCEQAIKVLQIMEG-EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
+ + Y +QG + A+++ + M+G G P+ + +LI++ A R +EA ++ + +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
G+ P L TY+ L+ + + K +E + M G PD A ++ D L
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Query: 205 INEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGK 264
++ ++ G +P++ Y+ ++ + A +V E++ + D YN++I +G+
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 265 YGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKI 324
G EA +LF++++ +G P+ VT+NSL+ RE + K ++ MQ+ G D
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV-YAVLVDIFGQYGKFQNAEECVQAL 383
+ TII G+QG+ D + ++ M + A+ Y VL+D G+ + A + +
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 384 KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRY 443
G+ + + AL YA+ G E+A M G +P+ + +++++
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524
Query: 444 MEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+A +Y + G +P Y ++ ++ + D++ + ME
Sbjct: 525 RKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 148/316 (46%), Gaps = 3/316 (0%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK--ATEVL 240
+ Y ++ + +G+ ++ M+ +G P+ ++ ++ +G A E+L
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ +R + D YN+++ + L A+K+F M+ +P++ T+N++I + R
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
G +A LF +++ +G +PD + +++ + + +K+ ++ M G K Y
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 361 AVLVDIFGQYGKFQNAEECVQALKS-EGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
++ ++G+ G+ A + + +K G + L ++ + +A ++ M
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
GI+P + + LI ++ AG+ EA + + SG PD + Y+ ++ +R +
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 480 EVPIIYKRMETDGCTP 495
+ +Y+ M +DG TP
Sbjct: 526 KAWGLYRDMISDGHTP 541
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 197/505 (39%), Gaps = 74/505 (14%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEAL-GFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ +I K+G LD A+ L M+ L G + +YT LI++LG RT EA L EM
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
+ G+KP L Y+ M+ SG Y ++LD +
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524
Query: 199 EDTWSTINEMKMKGFQPNSFVYS-KIVGLYRDNGM--WKKATEVLEEI------------ 243
W +M G P+ +Y I+GL ++N +K +EE+
Sbjct: 525 RKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVL 584
Query: 244 ----------RERKIS------LDTHIYNSIIDTFGKYGELGEALKL--FVKMQKEGVRP 285
R+ K++ L+ SI+ ++ G EA +L F+K G +
Sbjct: 585 VKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKR 644
Query: 286 NIVTWNSLIKWHCREGDYTKALN------------------------------------- 308
I +LI HC+ + + AL+
Sbjct: 645 LIT--EALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQ 702
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG-NKKYGAVYAVLVDIF 367
+FSD++ G + +++ + G +T + ++G + +Y +++ +
Sbjct: 703 VFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAY 762
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
G+ +Q AE V L+ G + +L +AYAQ G E+A + M +G P +
Sbjct: 763 GKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTV 822
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
+N+L++A GR E V +++ G + ++ AF R EV IY
Sbjct: 823 ESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSS 882
Query: 488 METDGCTPDRKAKQMLQDALTALER 512
M+ G P + +M+ + L +R
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKR 907
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 172/422 (40%), Gaps = 17/422 (4%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+S C ++ NLD A+ + MEA Q ++Y +I G G +EA+ LF E+
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELE 359
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P YN +M G + TY ++ + G+L+
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419
Query: 200 DTWSTINEMK-MKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+MK + G P++ Y+ ++ +A ++ E+ + I Y+++
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I + K G+ EA F M + G +P+ + ++ ++ R + KA L+ DM G
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P ++ +I L ++ + D I+K M + +VLV G+ F A
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVK--GEC--FDLAAR 595
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG------IEPNIVMLNM 432
++ + G + + ++ +Y+ G +A ++L+ ++ I +++L+
Sbjct: 596 QLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHC 655
Query: 433 LINAFSNA-GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
+N S A Y V+ S Y TL+ + + + E ++ +
Sbjct: 656 KVNNLSAALDEYFADPCVHGWCFGSS-----TMYETLLHCCVANEHYAEASQVFSDLRLS 710
Query: 492 GC 493
GC
Sbjct: 711 GC 712
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 119/265 (44%), Gaps = 35/265 (13%)
Query: 233 WKKATEVLEEIRERKI-SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
W++A EV E + R S + + +I+ G++ + A+++F + + V + +N
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYN 229
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+++ + R G ++KA L M+++G PD F T+I+
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN--------------------- 268
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
K G + L A E + +++ G+ + L +A ++ + A
Sbjct: 269 ARLKSGGLTPNL------------AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGA 316
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+KV + ME +P++ N +I+ + G EA ++ ++ G PD VTY +L+ A
Sbjct: 317 VKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPD 496
F R + ++V +Y++M+ G D
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKD 401
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 95/246 (38%), Gaps = 35/246 (14%)
Query: 50 KVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQ 109
K+ + D K T+ G E Y+ LI C++ + L+ QM LG
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 110 LSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXX 169
+Y LI A G +A+ LF+E++ GLK
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK------------------------- 1029
Query: 170 XXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRD 229
R Y ++ +G + MK G +P ++ Y
Sbjct: 1030 ----------LDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSS 1079
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
+G ++A +VL +++ ++ L T Y+S+ID + + + ++ ++M+KEG+ P+
Sbjct: 1080 SGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRI 1139
Query: 290 WNSLIK 295
W ++
Sbjct: 1140 WTCFVR 1145
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 2/303 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK-GFQPNSFVYSKIVGLYRDN 230
EM++ G E Y L+ + +GR + ++ + MK QP+ YS ++ +
Sbjct: 175 EMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQV 234
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG-VRPNIVT 289
+ K ++L ++R + I +T YN++ID +GK E ++M E +P+ T
Sbjct: 235 FAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWT 294
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
NS ++ G N + Q G+ P+ + F ++ G+ G + + E M
Sbjct: 295 MNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQ 354
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
Y V++D FG+ G + E + ++SE + S C+L AY + +
Sbjct: 355 KYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKAD 414
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+ VL+ +E I ++V N L++A+ ++ E V +++ G PD +TY T++
Sbjct: 415 KIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMV 474
Query: 470 KAF 472
KA+
Sbjct: 475 KAY 477
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 144/304 (47%), Gaps = 8/304 (2%)
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE-RKISLDTHIYNS 257
E EM +G N VY+ +V Y +G + A +LE ++ D H Y+
Sbjct: 167 EKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSI 226
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN-LFSDMQEQ 316
+I +F + + L M+++G+RPN +T+N+LI + + + + + L + E
Sbjct: 227 LIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGED 286
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
PD + + G G+ + ++ C+E S G + + +L+D +G+ G ++
Sbjct: 287 DCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKM 346
Query: 377 E---ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
E +Q +V+ N+ + +A+ + G +Q + ++M+ E I P+ V L L
Sbjct: 347 SAVMEYMQKYHYSWTIVTYNV---VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSL 403
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
+ A+ A + + V I+ S + DLV + L+ A+ R +KF E+ + + ME G
Sbjct: 404 VRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGF 463
Query: 494 TPDR 497
PD+
Sbjct: 464 KPDK 467
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 142/304 (46%), Gaps = 6/304 (1%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
++PN +Y K++ + +KA E+ +E+ ++ +Y +++ + + G A
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 273 KLFVKMQK-EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
L +M+ +P++ T++ LIK + + K +L SDM+ QG+ P+ + T+I
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGA-VYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
G+ + ++ M + K + + FG G+ + E C + +S G+
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI-- 323
Query: 391 SPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
PNI F L ++Y + G ++ V++ M+ IV N++I+AF AG +
Sbjct: 324 EPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEY 383
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
++ ++ + P VT +L++A+ R K D++ + + +E D L DA
Sbjct: 384 LFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYG 443
Query: 509 ALER 512
+E+
Sbjct: 444 RMEK 447
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 134/315 (42%), Gaps = 2/315 (0%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEA-LGFQLSSYSYTHLIEALGNVGRTSEADM 133
++ E Y+ L+S + G D A +LL +M++ Q ++Y+ LI++ V +
Sbjct: 183 VNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 242
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRE-TYEILLDYF 192
L +M G++P YN +M+ + T L F
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
G++E + + + G +PN ++ ++ Y +G +KK + V+E +++ S
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
YN +ID FG+ G+L + LF MQ E + P+ VT SL++ + R K +
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 422
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
++ + D F ++ G K+ +K E M +G K Y +V + G
Sbjct: 423 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 482
Query: 373 FQNAEECVQALKSEG 387
+ +E ++S G
Sbjct: 483 TTHVKELHGVVESVG 497
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 176/412 (42%), Gaps = 28/412 (6%)
Query: 113 YSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXE 172
Y++ L++ L GRTS+A +F +M G+ P Y I E
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE 258
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNG 231
M SG + + LLD F GR+ + + + + GF YS ++ GL+R
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRAR- 317
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ +A E+ + ++ I D +Y +I K G++ +ALKL M +G+ P+ +N
Sbjct: 318 RYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYN 377
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
++IK C G + +L +M E +PD +I + G ++ F +
Sbjct: 378 AVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKS 437
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANA-------YAQ 404
G A + L+D + G+ + A + ++ V ++F L+++ +
Sbjct: 438 GCSPSVATFNALIDGLCKSGELKEARLLLHKME---VGRPASLFLRLSHSGNRSFDTMVE 494
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
G +A + L G P+IV N+LIN F AG A+ + + ++ G+SPD VT
Sbjct: 495 SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVT 554
Query: 465 YTTLM-------------KAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
Y TL+ K F F P +Y+ + T C RK K ++
Sbjct: 555 YNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSC---RKRKVLV 603
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 170/453 (37%), Gaps = 40/453 (8%)
Query: 100 LAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYN-IXXXXXX 158
L ++++ G + SY + LI A +G +A F M +P + YN I
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 159 XXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSF 218
EM+ T+ IL+D GR D ++M +G PN
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 219 VYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM 278
Y+ ++ G A ++ E++ D+ +N+++D F K G + EA +L
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 279 QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
+K+G + ++SLI R YT+A L+++M ++ + PD ++ +I L + GK
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
+ K SM S+G Y ++ G + + L
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH------- 451
+ + GL +A ++ +E G P++ N LI+ +G EA + H
Sbjct: 415 ICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRP 474
Query: 452 --------------------------------HIKESGVSPDLVTYTTLMKAFIRTKKFD 479
H ++G SPD+V+Y L+ F R D
Sbjct: 475 ASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDID 534
Query: 480 EVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+ ++ G +PD L + L + R
Sbjct: 535 GALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 129/272 (47%), Gaps = 1/272 (0%)
Query: 202 WSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDT 261
W T+ E+K G +S+ + ++ Y GM +KA E ++E D YN I+
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 262 FGKYGELGE-ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+ A ++ +M K PN+ T+ L+ ++G + A +F DM +G+ P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ + +IS L ++G D +K F M + GN + L+D F + G+ A E +
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+ + +G ++ + +L + + QA ++ M + I+P+I++ +LI S A
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKA 351
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
G+ +A+ + + G+SPD Y ++KA
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKAL 383
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 175/453 (38%), Gaps = 70/453 (15%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ L+ CK G + A LL E GF L Y+ LI+ L R ++A L+ M+
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+KP + LY I M GI Y ++ G LE
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ S EM P++ ++ ++ NG+ ++A E+ EI + S +N++I
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 260 DTFGKYGELGEA------------LKLFVKMQKEGVR----------------------- 284
D K GEL EA LF+++ G R
Sbjct: 451 DGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD 510
Query: 285 ----PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDT 340
P+IV++N LI CR GD AL L + +Q +GL PD + T+I+ L G+ +
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Query: 341 IKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL-- 398
K F + + AVY L+ + + VLV+ N++
Sbjct: 571 AFKLFYAKDD--FRHSPAVYRSLM---------------TWSCRKRKVLVAFNLWMKYLK 613
Query: 399 ---------ANAYAQ---QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
AN Q +G E+A++ L ++ E + + + +GR+ EA
Sbjct: 614 KISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEA 673
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
+ V+ ++E + + L+ + ++ D
Sbjct: 674 LMVFSVLREKKILVTPPSCVKLIHGLCKREQLD 706
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 162/423 (38%), Gaps = 43/423 (10%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ LI K G ++ A+ LL+ M + G +Y Y +I+AL G E L EM
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
P + I E+ SG + T+ L+D +G L
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 199 EDTWSTINEMKMKGFQPNSFVY------SKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
++ +++M++ +P S ++ ++G KA L + S D
Sbjct: 460 KEARLLLHKMEVG--RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK----------------- 295
YN +I+ F + G++ ALKL +Q +G+ P+ VT+N+LI
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA 577
Query: 296 ----------------WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWD 339
W CR+ A NL+ ++ D + I C E
Sbjct: 578 KDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETER 637
Query: 340 TIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALA 399
+++ E T + G Y + + Q G+F A L+ + +LV+P L
Sbjct: 638 ALRRLIELDTRKDELTLGP-YTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLI 696
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS-VYHHIKESGV 458
+ ++ + AI+V + + N L+++ + ME +S + + ++ +G
Sbjct: 697 HGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGY 756
Query: 459 SPD 461
+ D
Sbjct: 757 NVD 759
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 158/311 (50%), Gaps = 2/311 (0%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
E + +L+ F SA ++ ++EM G +P+ +V+ ++ NG K+A++V E+
Sbjct: 168 ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED 227
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+RE K + + S++ + + G+L EA ++ V+M++ G+ P+IV + +L+ + G
Sbjct: 228 MRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGE-QGKWDTIKKCFESMTSRGNKKYGAVYA 361
A +L +DM+++G P+ + +I L + + D + F M G + Y
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
L+ F ++G + ++ +GV+ S + + A+ ++ E+ +++++ M+
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
G P++++ N++I G EA+ +++ ++ +G+SP + T+ ++ F E
Sbjct: 407 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Query: 482 PIIYKRMETDG 492
+K M + G
Sbjct: 467 CNHFKEMVSRG 477
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 170/413 (41%), Gaps = 12/413 (2%)
Query: 65 NPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGN 124
NPE P E + L+ + + +A+ +L +M G + Y + L++AL
Sbjct: 161 NPELIEP------ELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCK 214
Query: 125 VGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRET 184
G EA +F++M P L + +M ++G+
Sbjct: 215 NGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVV 273
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEI 243
+ LL + AG++ D + +N+M+ +GF+PN Y+ ++ L R +A V E+
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM 333
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
D Y ++I F K+G + + + M+K+GV P+ VT+ ++ H ++ +
Sbjct: 334 ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQF 393
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+ L L M+ +G +PD I+ +I + G+ + + M + G + ++
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIMEGE 421
++ F G A + + S G+ +P +L N + E A V + +
Sbjct: 454 INGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNK 513
Query: 422 --GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
E N+ + I+A G EA S + E + P TY LMK
Sbjct: 514 TSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 129/305 (42%), Gaps = 52/305 (17%)
Query: 201 TWSTINEMKMKG---FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
W I EM+ +P FV ++ + M KKA EVL+E+ + + D +++
Sbjct: 150 VWGLIEEMRKTNPELIEPELFVV--LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 207
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
++D K G + EA K+F M +E PN+ + SL+ CREG +A + M+E G
Sbjct: 208 LLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
L PD +F ++S GK M RG + Y VL+
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI------------- 313
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLC------EQAIKVLQIMEGEGIEPNIVMLN 431
Q LC ++A++V ME G E +IV
Sbjct: 314 ---------------------------QALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
LI+ F G + SV +++ GV P VTY +M A + ++F+E + ++M+
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 492 GCTPD 496
GC PD
Sbjct: 407 GCHPD 411
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 139/311 (44%), Gaps = 4/311 (1%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EM G+ + LLD G +++ +M+ K F PN ++ ++ + G
Sbjct: 192 EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREG 250
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+A EVL +++E + D ++ +++ + G++ +A L M+K G PN+ +
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 292 SLIKWHCR-EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
LI+ CR E +A+ +F +M+ G D + +IS + G D + M
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
+G Y ++ + +F+ E ++ +K G I+ + + G ++
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKE 430
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV--SPDLVTYTTL 468
A+++ ME G+ P + ++IN F++ G +EA + + + G+ +P T +L
Sbjct: 431 AVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSL 490
Query: 469 MKAFIRTKKFD 479
+ +R K +
Sbjct: 491 LNNLVRDDKLE 501
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 11/250 (4%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQK---EGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
+ S++ K + G L +M+K E + P + L++ KA+ +
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVL 190
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR--GNKKYGAVYAVLVDIFG 368
+M + GL PD +F ++ L + G K FE M + N +Y + L+ +
Sbjct: 191 DEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRY---FTSLLYGWC 247
Query: 369 QYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
+ GK A+E + +K G+ +F L + YA G A ++ M G EPN+
Sbjct: 248 REGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVN 307
Query: 429 MLNMLINAFSNAGRYM-EAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
+LI A + M EAM V+ ++ G D+VTYT L+ F + D+ +
Sbjct: 308 CYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDD 367
Query: 488 METDGCTPDR 497
M G P +
Sbjct: 368 MRKKGVMPSQ 377
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
++ VL+ F + A E + + G+ +F L +A + G ++A KV + M
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
E PN+ L+ + G+ MEA V +KE+G+ PD+V +T L+ + K
Sbjct: 229 R-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 479 DEVPIIYKRMETDGCTPDRKAKQMLQDALTALERR 513
+ + M G P+ +L AL E+R
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 155/314 (49%), Gaps = 6/314 (1%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++ L + F L++ + + M +K PN YS + + +G + A + +
Sbjct: 131 SFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSM 189
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ +S + + +ID + K G+L A+ L+ +M++ + N+VT+ +LI C++G+
Sbjct: 190 KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEM 249
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+A ++S M E + P+ ++ TII ++G D K M ++G + Y V+
Sbjct: 250 QRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVI 309
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ GK + A E V+ ++ ++ IF + NAY + G + A+ + + G
Sbjct: 310 ISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
EP++V L+ +I+ + G+ EA+ VY I+++ + V YT L+ A + F EV
Sbjct: 370 EPDVVALSTMIDGIAKNGQLHEAI-VYFCIEKA----NDVMYTVLIDALCKEGDFIEVER 424
Query: 484 IYKRMETDGCTPDR 497
++ ++ G PD+
Sbjct: 425 LFSKISEAGLVPDK 438
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 155/339 (45%), Gaps = 4/339 (1%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
+V G R ++ ++ + G+++ ++ M G +P+ Y+ ++ + NG
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 233 WKKATEVLEEIRERKISL---DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
+ A+ VLE +R + D +NS+ + F K L E +++ + + PN+VT
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVT 165
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+++ I C+ G+ AL F M+ L P+ F +I + G + ++ M
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
Y L+D F + G+ Q AEE + + V + ++ + + + Q+G +
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
A+K L M +G+ +I ++I+ G+ EA + +++S + PD+V +TT+M
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
A+ ++ + +Y ++ G PD A + D +
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 171/437 (39%), Gaps = 34/437 (7%)
Query: 69 PRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEA-LGF--QLSSYSYTHLIEALGNV 125
PR G E Y+ LI C+ G++ A +L + A GF + S+ L +
Sbjct: 83 PRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM 142
Query: 126 GRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETY 185
E + M+ C P + Y+ M + T+
Sbjct: 143 KMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTF 201
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE 245
L+D + AG LE S EM+ N Y+ ++ + G ++A E+ + E
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
++ ++ +Y +IID F + G+ A+K KM +G+R +I + +I C G +
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG------------- 352
A + DM++ L PD IF T+++ + G+ + + RG
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Query: 353 -----------------NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
K +Y VL+D + G F E + G++ ++
Sbjct: 382 GIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMY 441
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
+ +QG A K+ M EG+ +++ LI ++ G +EA V+ +
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN 501
Query: 456 SGVSPDLVTYTTLMKAF 472
SG+SPD + L++A+
Sbjct: 502 SGISPDSAVFDLLIRAY 518
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 158/379 (41%), Gaps = 40/379 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI CK G+L+ A+SL +M + L+ +YT LI+ G A+ ++ M+
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
++P +Y +M++ G+ Y +++ G+L+
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + +M+ P+ +++ ++ Y +G K A + ++ ER D +++I
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D K G+L EA+ F + N V + LI C+EGD+ + LFS + E GL
Sbjct: 381 DGIAKNGQLHEAIVYFCIE-----KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV 435
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD ++ + I+ L +QG LVD F +
Sbjct: 436 PDKFMYTSWIAGLCKQGN-------------------------LVDAFKLKTR------- 463
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ EG+L+ + L A +GL +A +V M GI P+ + ++LI A+
Sbjct: 464 ---MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEK 520
Query: 440 AGRYMEAMSVYHHIKESGV 458
G A + ++ G+
Sbjct: 521 EGNMAAASDLLLDMQRRGL 539
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 112/272 (41%), Gaps = 12/272 (4%)
Query: 232 MWKKATEVLEEIRERK-----ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
M ++A + L +R+ + + HI+ I G +LK + G P+
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGIL-----SLKFLAYLVSRGYTPH 55
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
++NS++ + C+ G A ++ M G PD + ++I G + E
Sbjct: 56 RSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLE 115
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQ 404
S+ + +F + K + +E + SPN+ + + + +
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCK 175
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
G + A+K M+ + + PN+V LI+ + AG A+S+Y ++ +S ++VT
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
YT L+ F + + +Y RM D P+
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 186/410 (45%), Gaps = 3/410 (0%)
Query: 74 ELSSEFY--SQLISKCCKEGNLDRAMSLLAQMEA-LGFQLSSYSYTHLIEALGNVGRTSE 130
E+S + + S +++ C+ GN+D+AM + E+ LG +L+ +Y LI +G
Sbjct: 220 EVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEG 279
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
+ + M G+ + Y + + + + Y +L+D
Sbjct: 280 MTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 339
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
+ G++ D + M G + N+ + + ++ Y +G +A ++ + + +
Sbjct: 340 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D H YN+++D + + G + EALKL +M ++ V P ++T+N L+K + R G + L+L+
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
M ++G+ D T++ L + G ++ K +E++ +RG V++ +
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
K A+E + + + + AL++ Y + G ++A V + ME +GI P I M
Sbjct: 520 EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMY 579
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
N LI+ + + ++ G++P + TY L+ + D+
Sbjct: 580 NTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 137/312 (43%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY L++ + G +E + M +G N Y+ ++ Y G+ ++A V E +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+E+K+ D H+Y ++D + + G++ +A+++ M + GVR N NSLI +C+ G
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+A +FS M + L PD + T++ G D K + M + Y +L
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ + + G F + + + GV L A + G +A+K+ + + G+
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
+ + LN++I+ + EA + ++ P + TY L + + E
Sbjct: 503 LTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFA 562
Query: 484 IYKRMETDGCTP 495
+ + ME G P
Sbjct: 563 VKEYMERKGIFP 574
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 147/300 (49%), Gaps = 3/300 (1%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHI--YNSIIDTFGKYGELGEAL 272
P+ F S +V Y +G KA +E E + L+ ++ YNS+I+ + G++
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMVFAKET-ESSLGLELNVVTYNSLINGYAMIGDVEGMT 281
Query: 273 KLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
++ M + GV N+VT+ SLIK +C++G +A ++F ++E+ L D ++ ++
Sbjct: 282 RVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 341
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
G+ + ++M G + + L++ + + G+ AE+ + +
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
+ + L + Y + G ++A+K+ M + + P ++ N+L+ +S G + + +S++
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+ + GV+ D ++ +TL++A + F+E +++ + G D ++ L +E+
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 174/456 (38%), Gaps = 47/456 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ C+ G +D A+ L QM + +Y L++ +G + L+K M
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM- 462
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA---- 195
LK +N I ++ ++ + R T I L+ +S
Sbjct: 463 ---LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
++ + ++ + + +P Y + Y G K+A V E + + I +Y
Sbjct: 520 EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMY 579
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N++I KY L + L ++++ G+ P + T+ +LI C G KA +M E
Sbjct: 580 NTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIE 639
Query: 316 QGLYPDPKIFVTIISCLGEQGKWD----------------------------------TI 341
+G+ + I I + L K D
Sbjct: 640 KGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT 699
Query: 342 KKCFESMTSRGNKKY----GAVYAVLVDIFGQYGKFQNAEECV-QALKSEGVLVSPNIFC 396
+K ES+ + KK VY V + + GK ++A + L S+ + +
Sbjct: 700 QKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYT 759
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
L + A G +A + M +GI PNIV N LI G A + H + +
Sbjct: 760 ILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 819
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
G++P+ +TY TL+ +++ E + ++M G
Sbjct: 820 GITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 232 MWKKATEVLEEIRERKISLDT--HIYNS---------IIDTFGKYGEL------------ 268
+W + V +E D +Y + D G YG +
Sbjct: 140 VWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSN 199
Query: 269 ----GE---ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ--GLY 319
GE AL ++ +M V P++ T + ++ +CR G+ KA+ +F+ E GL
Sbjct: 200 LVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLE 258
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
+ + ++I+ G + + + M+ RG + Y L+ + + G + AE
Sbjct: 259 LNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHV 318
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ LK + ++ +++ L + Y + G A++V M G+ N + N LIN +
Sbjct: 319 FELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCK 378
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+G+ +EA ++ + + + PD TY TL+ + R DE
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 124/290 (42%), Gaps = 10/290 (3%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
R G + E Y+ LIS K +L++ L+ ++ A G + +Y LI N+G
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVD-----SGIWRTRET 184
+A EMI G+ +N+ + ++VD G +E
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI- 243
E + ++ + S N K PN+ VY+ + G + A ++ ++
Sbjct: 689 LEASATTCLKTQKIAE--SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 244 -RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+R I D + Y +I G++ +A L +M +G+ PNIVT+N+LIK C+ G+
Sbjct: 747 SSDRFIP-DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
+A L + ++G+ P+ + T+I L + G + E M +G
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 156/386 (40%), Gaps = 12/386 (3%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S L+ K G+ + AM L + A G + + +I L + + +EA + +
Sbjct: 475 STLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI 534
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
KP + Y M GI+ T E Y L+ L
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK 594
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ E++ +G P Y ++ + + GM KA E+ E+ I+L+ +I + I +
Sbjct: 595 VADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIAN 654
Query: 261 TFGKYGELGEALKLFVKMQK-EGVRPNIVTWNSLIKWHCREGDYTKAL--NLFSDMQEQG 317
+ + ++ EA L K+ + + P + ++ T+ + ++ + ++
Sbjct: 655 SLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKL 714
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN---KKYGAVYAVLVDIFGQYGKFQ 374
L P+ ++ I+ L + GK + +K F + S +Y Y +L+ G
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEY--TYTILIHGCAIAGDIN 772
Query: 375 NAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
A + +G++ PNI + AL + G ++A ++L + +GI PN + N
Sbjct: 773 KAFTLRDEMALKGII--PNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNT 830
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGV 458
LI+ +G EAM + + E G+
Sbjct: 831 LIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 181/420 (43%), Gaps = 13/420 (3%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLF 135
S + + L+ C + G+ A ++ Q A GF +S ++ + + L NV ++
Sbjct: 147 SPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVY 206
Query: 136 KEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
KEM G +N +N+ M+ G+W ++ +++D
Sbjct: 207 KEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKT 266
Query: 196 GRLEDTWSTINEMKMKG---FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
G + + +M M PN+ Y+ ++ + G A + ++ + + +
Sbjct: 267 GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNE 326
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
Y +++D +G+ G EAL+L +M +G+ N V +NS++ W EGD A+++ D
Sbjct: 327 RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRD 386
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYG---AVYAVLVDIFGQ 369
M + + D ++ L G +K+ E KK + L+ F +
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNG---YVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 370 YGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
K A++ + ++ +G+ + F L + Y ++G E+A+++ M N+V+
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
N ++N S G A +V + ++ D+VTY TL+ ++T +E I +M+
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQ 559
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 182/421 (43%), Gaps = 9/421 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM- 138
++ +I CKE L A+S+ +M G + S+ +I+ G A L +M
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 139 IYCG--LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
+ G + P YN +MV SG+ TY L+D + AG
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG 340
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
++ +EM KG N+ +Y+ IV G + A VL ++ + + +D
Sbjct: 341 SSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA 400
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
++ + G + EA++ ++ ++ + +IV N+L+ R+ A + M Q
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
GL D F T+I ++GK + + ++ M +Y +V+ + G A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI--VMLNMLI 434
E V A++ + ++ + L N + G E+A +L M+ + E ++ V N++I
Sbjct: 521 EAVVNAMEIKDIVT----YNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCT 494
N G Y +A V + E GV PD +TY TL+ +F + + ++V ++ + G T
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 495 P 495
P
Sbjct: 637 P 637
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 3/317 (0%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
+ ++ L+ G + + I + + +GF + + +G + + +V +E
Sbjct: 149 DVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKE 208
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+ + + +N +I +F K +L EAL +F +M K GV PN+V++N +I C+ GD
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 303 YTKALNLFSDMQEQG---LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
AL L M + P+ + ++I+ + G+ D ++ M G
Sbjct: 269 MRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERT 328
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
Y LVD +G+ G A + S+G++V+ I+ ++ +G E A+ VL+ M
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN 388
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
+ ++ + +++ G EA+ I E + D+V + TLM F+R KK
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLA 448
Query: 480 EVPIIYKRMETDGCTPD 496
I M G + D
Sbjct: 449 CADQILGSMLVQGLSLD 465
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 177/400 (44%), Gaps = 11/400 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSS---YSYTHLIEALGNVGRTSEADMLFK 136
++ +I CK G++ A+ LL +M + S +Y +I GR A+ +
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
+M+ G+ Y EM G+ Y ++ + G
Sbjct: 316 DMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEG 375
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
+E S + +M K Q + F + +V GL R NG K+A E +I E+K+ D +
Sbjct: 376 DIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR-NGYVKEAVEFQRQISEKKLVEDIVCH 434
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N+++ F + +L A ++ M +G+ + +++ +LI + +EG +AL ++ M +
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
+ I+ +I++ L ++G + E++ + K Y L++ + G +
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRG----MAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEE 550
Query: 376 AEECVQAL-KSEG-VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
A++ + + K +G VS F + N + G E+A +VL+ M G+ P+ + L
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
I +FS + + ++ ++ GV+P Y ++++ +
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 130/307 (42%), Gaps = 13/307 (4%)
Query: 67 EAPRPGEELSSE-------FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLI 119
EA R +E++S+ Y+ ++ EG+++ AMS+L M + Q+ ++ ++
Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVV 403
Query: 120 EALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIW 179
L G EA +++ L + +N M+ G+
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLS 463
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
++ L+D ++ G+LE + M N +Y+ IV GM A V
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNI--VTWNSLIKWH 297
+ + + D YN++++ K G + EA + KMQK+ ++ VT+N +I
Sbjct: 524 VNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHL 579
Query: 298 CREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYG 357
C+ G Y KA + M E+G+ PD + T+I+ + + + + + + +G +
Sbjct: 580 CKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHE 639
Query: 358 AVYAVLV 364
+Y +V
Sbjct: 640 HIYLSIV 646
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 159/314 (50%), Gaps = 4/314 (1%)
Query: 178 IWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKAT 237
+ + ++ IL D+ +S GR +D M+ G + + YS + + KA
Sbjct: 95 VLKVQDLNVILRDFGIS-GRWQDLIQLFEWMQQHG-KISVSTYSSCIKFVGAKNV-SKAL 151
Query: 238 EVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWH 297
E+ + I + ++ +I NSI+ K G+L +KLF +M+++G++P++VT+N+L+
Sbjct: 152 EIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGC 211
Query: 298 CR-EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
+ + Y KA+ L ++ G+ D ++ T+++ G+ + + + M G+
Sbjct: 212 IKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPN 271
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
Y+ L++ + G ++ A+E + +KS G++ + + L Y + GL +++ ++L
Sbjct: 272 IYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLS 331
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
+E G N + ML++ S AG+ EA S++ +K GV D + ++ A R+K
Sbjct: 332 ELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSK 391
Query: 477 KFDEVPIIYKRMET 490
+F E + + ET
Sbjct: 392 RFKEAKELSRDSET 405
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 1/290 (0%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRER 246
+L V G+L+ ++MK G +P+ Y+ ++ G + + KA E++ E+
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN 231
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
I +D+ +Y +++ G EA +M+ EG PNI ++SL+ + +GDY KA
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
L ++M+ GL P+ + T++ + G +D ++ + S G + Y +L+D
Sbjct: 292 DELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDG 351
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
+ GK + A +K +GV + +A + ++A ++ + E + +
Sbjct: 352 LSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCD 411
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
+VMLN ++ A+ AG M + + E VSPD T+ L+K FI+ K
Sbjct: 412 LVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 134/279 (48%), Gaps = 9/279 (3%)
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
+++++ L ++ L N I+ FG G + ++LF MQ+ G + ++ T++S
Sbjct: 80 QRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSC 138
Query: 294 IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN 353
IK+ + +KAL ++ + ++ + I +I+SCL + GK D+ K F+ M G
Sbjct: 139 IKF-VGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGL 197
Query: 354 K----KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
K Y + A + + Y K A E + L G+ + ++ + A G E
Sbjct: 198 KPDVVTYNTLLAGCIKVKNGYPK---AIELIGELPHNGIQMDSVMYGTVLAICASNGRSE 254
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A +Q M+ EG PNI + L+N++S G Y +A + +K G+ P+ V TTL+
Sbjct: 255 EAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLL 314
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
K +I+ FD + +E+ G + ML D L+
Sbjct: 315 KVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLS 353
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 138/287 (48%), Gaps = 9/287 (3%)
Query: 230 NGMWKKATEVLEEIRER-KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIV 288
+G W+ ++ E +++ KIS+ T Y+S I G + +AL+++ + E + N+
Sbjct: 111 SGRWQDLIQLFEWMQQHGKISVST--YSSCIKFVGA-KNVSKALEIYQSIPDESTKINVY 167
Query: 289 TWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS-CLGEQGKWDTIKKCFES 347
NS++ + G + LF M+ GL PD + T+++ C+ + + +
Sbjct: 168 ICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGE 227
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQ 405
+ G + +Y ++ I G+ + AE +Q +K EG SPNI + +L N+Y+ +
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEG--HSPNIYHYSSLLNSYSWK 285
Query: 406 GLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTY 465
G ++A +++ M+ G+ PN VM+ L+ + G + + + ++ +G + + + Y
Sbjct: 286 GDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 466 TTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
LM + K +E I+ M+ G D A ++ AL +R
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKR 392
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 119/268 (44%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E P G ++ S Y +++ C G + A + + QM+ G + Y Y+ L+ + G
Sbjct: 227 ELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKG 286
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+AD L EM GL P + E+ +G Y
Sbjct: 287 DYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYC 346
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
+L+D AG+LE+ S ++MK KG + + + S ++ + +K+A E+ +
Sbjct: 347 MLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETT 406
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
D + N+++ + + GE+ +++ KM ++ V P+ T++ LIK+ +E + A
Sbjct: 407 YEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLA 466
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGE 334
DM +G + ++ ++I LG+
Sbjct: 467 YQTTLDMHSKGHRLEEELCSSLIYHLGK 494
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 150/365 (41%), Gaps = 37/365 (10%)
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
++S YS I K N+ +A+ + + +++ Y ++ L G+
Sbjct: 129 KISVSTYSSCI-KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIK 187
Query: 134 LFKEMIYCGLKPRLNLYN-IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYF 192
LF +M GLKP + YN + E+ +GI Y +L
Sbjct: 188 LFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAIC 247
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
S GR E+ + I +MK++G PN + YS ++ Y G +KKA E++ E
Sbjct: 248 ASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTE---------- 297
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
M+ G+ PN V +L+K + + G + ++ L S+
Sbjct: 298 -------------------------MKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE 332
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
++ G + + ++ L + GK + + F+ M +G + G ++++ + +
Sbjct: 333 LESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKR 392
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
F+ A+E + ++ + + AY + G E +++++ M+ + + P+ ++
Sbjct: 393 FKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHI 452
Query: 433 LINAF 437
LI F
Sbjct: 453 LIKYF 457
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 189/451 (41%), Gaps = 21/451 (4%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R L++ + + + C + N A+S + +M LG +SY +I+ L
Sbjct: 467 EIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQEN 526
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ L + P ++ Y I M + G+ T Y
Sbjct: 527 IIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYS 586
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
++ GR+ + T +M G QP+ Y ++ Y NG +A E++EE+ +
Sbjct: 587 SIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKH 646
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ + Y +I F K G + + + KM ++G+ PN+V + +LI ++GD+ +
Sbjct: 647 FLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFS 706
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI--KKCFESMTSRGNKKYGAVY---A 361
LF M E + D ++T++S G W + KK + + G +K
Sbjct: 707 FTLFGLMGENDIKHDHIAYITLLS-----GLWRAMARKKKRQVIVEPGKEKLLQRLIRTK 761
Query: 362 VLVDI---FGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQ 416
LV I G YG A E + +K + PN++ + Y G ++A L+
Sbjct: 762 PLVSIPSSLGNYGSKSFAMEVIGKVKKS---IIPNLYLHNTIITGYCAAGRLDEAYNHLE 818
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M+ EGI PN+V +L+ + AG A+ ++ + + PD V Y+TL+K K
Sbjct: 819 SMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFK 875
Query: 477 KFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ + + M+ G P++ + + L L
Sbjct: 876 RPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/471 (20%), Positives = 174/471 (36%), Gaps = 77/471 (16%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ + CK+ N+ AM L +M F+L + LI +G + ++F +MI
Sbjct: 275 YTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMI 334
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS-GIWRTRETYEILLDYFVSAGRL 198
G++ + Y+I S I R Y L+ F G +
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ + M G P+ Y ++ + K A +L+ I + ++ +
Sbjct: 395 DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINP----PV 450
Query: 259 IDTFGK--------YGELGE-------------------------ALKLFVKMQKEGVRP 285
ID G GE+ AL KM G P
Sbjct: 451 IDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTP 510
Query: 286 NIVTWNSLIKW-----------------------------------HCREGDYTKALNLF 310
++NS+IK C++ D A +
Sbjct: 511 LPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAII 570
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
M+E GL P I+ +II LG+QG+ ++ F M G + Y ++++ + +
Sbjct: 571 DAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARN 630
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
G+ A E V+ + + S + L + + + G+ E+ + L M +G+ PN+V+
Sbjct: 631 GRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLY 690
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM----KAFIRTKK 477
LI F G + + +++ + E+ + D + Y TL+ +A R KK
Sbjct: 691 TALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKK 741
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 163/438 (37%), Gaps = 69/438 (15%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
L Y L CK G A +L ME G+ + YT L++ + A L
Sbjct: 235 LPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRL 294
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
+ M+ + +D I+ T L+ F+
Sbjct: 295 YLRMVERSFE-----------------------------LDPCIFNT------LIHGFMK 319
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV-LEEIRERKISLDTH 253
G L+ ++M KG Q N F Y ++G Y G A + + IS + H
Sbjct: 320 LGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVH 379
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW--HCREGDYTKALNLFS 311
Y ++I F K G + +A+ L ++M G+ P+ +T+ L+K C E Y A+ +
Sbjct: 380 CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKY--AMVILQ 437
Query: 312 DMQEQGLYPDPKIF-------VTIISCLGEQGKWD-----------TIKKC--------- 344
+ + G +P + V + S LGE + D T C
Sbjct: 438 SILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAAL 497
Query: 345 --FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAY 402
E M + G Y ++ Q ++ V ++ + + + + N
Sbjct: 498 SRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNEL 557
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
++ + A ++ ME G+ P + + + +I + GR +EA + + ESG+ PD
Sbjct: 558 CKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDE 617
Query: 463 VTYTTLMKAFIRTKKFDE 480
+ Y ++ + R + DE
Sbjct: 618 IAYMIMINTYARNGRIDE 635
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 157/390 (40%), Gaps = 38/390 (9%)
Query: 107 GFQLSSYSYTHLIEALGNVGRTSEADMLFKE-MIYCGLKPRLNLYNIXXXXXXXXXXXXX 165
G +L S Y LI L +G+ A+ + + +I G+ P ++ +
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 166 XXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVG 225
++ SG +R + +++D + R + + ++K +G + ++
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 226 LYRDNGMWKKATEVLEEI-RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVR 284
+G +A +L+ + ++ L ++Y S+ F K G EA LF M+ +G
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYY 269
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
+ V + L+K +C++ + T A+ L+ M E+ DP IF T+I + G D +
Sbjct: 270 VDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVM 329
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ 404
F M +G + Y +++ +Y +
Sbjct: 330 FSQMIKKGVQSNVFTYHIMI-----------------------------------GSYCK 354
Query: 405 QGLCEQAIKVLQIMEG-EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+G + A+++ G E I N+ LI F G +A+ + + ++G+ PD +
Sbjct: 355 EGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHI 414
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
TY L+K + + +I + + +GC
Sbjct: 415 TYFVLLKMLPKCHELKYAMVILQSILDNGC 444
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 143/359 (39%), Gaps = 37/359 (10%)
Query: 173 MVDSGIWRTR-----ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLY 227
M+D+ TR Y+ L F G + + + M++ G+ + +Y+ ++ Y
Sbjct: 223 MLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEY 282
Query: 228 -RDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
+DN M A + + ER LD I+N++I F K G L + +F +M K+GV+ N
Sbjct: 283 CKDNNM-TMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSN 341
Query: 287 IVTWNSLIKWHCREGDYTKALNLF-SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF 345
+ T++ +I +C+EG+ AL LF ++ + + + + +I ++G D
Sbjct: 342 VFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLL 401
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALAN----- 400
M G Y VL+ + + + + A +Q++ G ++P + L N
Sbjct: 402 MRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKV 461
Query: 401 -------------------AYAQQGLCEQ-----AIKVLQIMEGEGIEPNIVMLNMLINA 436
A LC Q A+ ++ M G P N +I
Sbjct: 462 ESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKC 521
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
+ S+ + I+E PD+ TY ++ + D I ME G P
Sbjct: 522 LFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+ +AGRL++ ++ + M+ +G PN Y+ ++ + + G + A ++ E D
Sbjct: 804 YCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEP---D 860
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+Y++++ + +AL L ++MQK G+ PN ++ L++ C +A+ +
Sbjct: 861 QVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVK 920
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
DM ++P +I L E+ K + F M G
Sbjct: 921 DMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 174/410 (42%), Gaps = 4/410 (0%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
++G L +M LL ++ G+++S LI + G +G + +F ++ + G+KP
Sbjct: 122 RKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTR 181
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
LYN +M G R TY IL+ G +++ + +M
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+ +G +PN F Y+ ++ + G +A + LE +R RK++ + + + +
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP 301
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
+A ++ V ++ V +++++ + + E+G PD F
Sbjct: 302 CKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAA 361
Query: 329 ISCLGEQGKWDTIKKC--FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
+SCL + D ++ C F+ SRG K Y VLV +F + ++ + +
Sbjct: 362 MSCLLK--GHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419
Query: 387 GVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
G+L S + A+ + + E A L M+ GI PN+V N ++ +S G +
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
V + G PD++T++ ++ R K+ + +K M G P+
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/504 (20%), Positives = 198/504 (39%), Gaps = 70/504 (13%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G +S E LI + G + AQ+ LG + S+ Y +I+AL A
Sbjct: 140 GYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLA 199
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ F++M G KP YNI +M G TY IL+D
Sbjct: 200 YLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDG 259
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPN-----SFV--------------------------- 219
F+ AGR+++ + M+++ PN +FV
Sbjct: 260 FLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQ 319
Query: 220 ---YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFV 276
Y ++ +N M K+ + L +I ER D+ +N+ + K +L E ++F
Sbjct: 320 RVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFD 379
Query: 277 KMQKEGVRP-----------------------------------NIVTWNSLIKWHCREG 301
GV+P ++ ++N++I C+
Sbjct: 380 GFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKAR 439
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
A ++MQ++G+ P+ F T +S +G + E + G K ++
Sbjct: 440 RIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFS 499
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
++++ + + ++A +C + + G+ + + L + G ++++K+ M+
Sbjct: 500 LIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKEN 559
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
G+ P++ N I +F + +A + + G+ PD TY+TL+KA + + E
Sbjct: 560 GLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEA 619
Query: 482 PIIYKRMETDGCTPDRKAKQMLQD 505
++ +E GC PD K+++++
Sbjct: 620 REMFSSIERHGCVPDSYTKRLVEE 643
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 126/332 (37%), Gaps = 58/332 (17%)
Query: 230 NGMWKK-----ATEVLEEIRER------------------------------KISL---- 250
N +++K + E+L+EIR+ +IS
Sbjct: 118 NALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 251 -DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
T +YN++ID K L A F +M+ +G +P+ T+N LI C++G +A+ L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
M+++G P+ + +I G+ D K E M R A V
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV----- 292
Query: 370 YGKFQNAEECVQALKSEGVLV-----SPNI----FCALANAYAQQGLCEQAIKVLQIMEG 420
+G F+ C+ K+ VLV N+ + A+ + + ++ + L+ +
Sbjct: 293 HGIFR----CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGE 348
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
G P+ N ++ +E ++ GV P Y L++A + ++F E
Sbjct: 349 RGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSE 408
Query: 481 VPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
K+M DG + + D L R
Sbjct: 409 GDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 66/150 (44%)
Query: 358 AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQI 417
++ +VL + + G + E ++ ++ G +S + C L ++ + GL + V
Sbjct: 111 SLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQ 170
Query: 418 MEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
+ G++P+ + N +I+A + A + ++ G PD TY L+ +
Sbjct: 171 ISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 478 FDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
DE + K+ME +G P+ +L D
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGF 260
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/463 (21%), Positives = 197/463 (42%), Gaps = 38/463 (8%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEA-LGFQLSSYSYTHLIEALGNVGRTSE 130
G L+ + ++ L++ C EG L+ A+ +L +M + + +Y +++A+ GR S+
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
L +M GL P YN M + + TY IL++
Sbjct: 259 LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI------- 243
+AG + + ++ MK QP+ Y+ ++ + G+ +A +++E++
Sbjct: 319 GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA 378
Query: 244 ----------------------RERKISLDTH-------IYNSIIDTFGKYGELGEALKL 274
R+ K +D H Y+++I + K G+L AL++
Sbjct: 379 NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
+M ++G++ N +T N+++ C+E +A NL + ++G D + T+I
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
+ K + + ++ M + + L+ +GK + A E L G+L +
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDST 558
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
F ++ Y ++G E+A + +P+ N+L+N G +A++ ++ +
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
E D VTY T++ AF + KK E + ME G PDR
Sbjct: 619 EER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 173/411 (42%), Gaps = 6/411 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ CK G+L A ++ M+ +Y LI L N G E L M
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
L+P + YN +M + G+ + T+ I L + + E
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 200 DTWSTINEM-KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ E+ M GF P+ Y ++ Y G A E++ E+ ++ I ++T N+I
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+D K +L EA L K G + VT+ +LI RE KAL ++ +M++ +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P F ++I L GK + + F+ + G + + ++ + + G+ + A E
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 379 CV-QALKSEGVLVSPNIFC-ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+++K N C L N ++G+ E+A+ + E E + V N +I+A
Sbjct: 578 FYNESIKHS--FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISA 634
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
F + EA + ++E G+ PD TY + + + K E + K+
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR---EGDYTKALNLF 310
+++ + + G+ AL++F KM + ++PN++T N+L+ R + A +F
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV-YAVLVDIFGQ 369
DM + G+ + + F +++ +GK + E M S V Y ++ +
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 370 YGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
G+ + +E + +K G++ + + L Y + G ++A +++++M+ + P++
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
N+LIN NAG E + + +K + PD+VTY TL+ E + ++ME
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 490 TDG 492
DG
Sbjct: 373 NDG 375
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 181/433 (41%), Gaps = 40/433 (9%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G L++ S I K C +G D+ LL M+ G + ++T I+ L G EA
Sbjct: 266 GRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEA 325
Query: 132 -DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
+LFK ++ GI + + ++D
Sbjct: 326 TSVLFKLKLF------------------------------------GISQDSVSVSSVID 349
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
F G+ E+ I+ +++ PN FVYS + G +A+ + +EI E +
Sbjct: 350 GFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D Y ++ID + G +A + F + K G P++ T LI R G + A ++F
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+M+ +GL D + ++ G+ + + + + + M S G A Y +L+
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
G A E + L G + S F + ++++G ++A + M ++P++V
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
+ L++ + A R +A+ +++ + ++G+ PD+V Y TL+ + ++ + M
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
Query: 491 DGCTPDRKAKQML 503
G P+ L
Sbjct: 647 RGMLPNESTHHAL 659
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 3/311 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS +S C G++ RA ++ ++ LG YT +I+ N+GRT +A F ++
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P L I M G+ TY L+ + +L
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ I+EM+ G P+ Y+ ++ G +A E++ E+ R T + +I
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K G+ EA L+ M ++P++VT ++L+ +C+ KA+ LF+ + + GL
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK-FQNAEE 378
PD ++ T+I G + + M RG + + LV G GK F N+E
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV--LGLEGKRFVNSET 673
Query: 379 CVQALKSEGVL 389
L E ++
Sbjct: 674 HASMLLEEIIV 684
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 4/267 (1%)
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
L E R + L+T +++ +ID + ++ ALKL K+ + G+ P+ SL+K R
Sbjct: 190 LFETRIDRRVLET-VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILR 248
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
A M +G + + + I G +D + M G +
Sbjct: 249 VHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVA 308
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
+ V +D + G + A + LK G+ ++ + + + G E+AIK++
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR 368
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
+ PNI + + ++ + G + A +++ I E G+ PD V YTT++ + + D
Sbjct: 369 ---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 480 EVPIIYKRMETDGCTPDRKAKQMLQDA 506
+ + + G P +L A
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGA 452
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 181/433 (41%), Gaps = 40/433 (9%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G L++ S I K C +G D+ LL M+ G + ++T I+ L G EA
Sbjct: 266 GRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEA 325
Query: 132 -DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
+LFK ++ GI + + ++D
Sbjct: 326 TSVLFKLKLF------------------------------------GISQDSVSVSSVID 349
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
F G+ E+ I+ +++ PN FVYS + G +A+ + +EI E +
Sbjct: 350 GFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D Y ++ID + G +A + F + K G P++ T LI R G + A ++F
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+M+ +GL D + ++ G+ + + + + + M S G A Y +L+
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
G A E + L G + S F + ++++G ++A + M ++P++V
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
+ L++ + A R +A+ +++ + ++G+ PD+V Y TL+ + ++ + M
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
Query: 491 DGCTPDRKAKQML 503
G P+ L
Sbjct: 647 RGMLPNESTHHAL 659
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 3/311 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS +S C G++ RA ++ ++ LG YT +I+ N+GRT +A F ++
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P L I M G+ TY L+ + +L
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ I+EM+ G P+ Y+ ++ G +A E++ E+ R T + +I
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K G+ EA L+ M ++P++VT ++L+ +C+ KA+ LF+ + + GL
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK-FQNAEE 378
PD ++ T+I G + + M RG + + LV G GK F N+E
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV--LGLEGKRFVNSET 673
Query: 379 CVQALKSEGVL 389
L E ++
Sbjct: 674 HASMLLEEIIV 684
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 4/267 (1%)
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
L E R + L+T +++ +ID + ++ ALKL K+ + G+ P+ SL+K R
Sbjct: 190 LFETRIDRRVLET-VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILR 248
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
A M +G + + + I G +D + M G +
Sbjct: 249 VHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVA 308
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
+ V +D + G + A + LK G+ ++ + + + G E+AIK++
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR 368
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
+ PNI + + ++ + G + A +++ I E G+ PD V YTT++ + + D
Sbjct: 369 ---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 480 EVPIIYKRMETDGCTPDRKAKQMLQDA 506
+ + + G P +L A
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGA 452
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 140/294 (47%), Gaps = 1/294 (0%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
+T+ IL+ G+ E + M G +P+ Y+ ++ + + KA+E+ ++
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 243 IRERKI-SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
++ + S D Y S+I + K G++ EA L M + G+ P VT+N L+ + + G
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
+ A + M G +PD F ++I G+ + +E M +RG Y+
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
+L++ + A E + L S+ ++ P ++ + + + + G +A +++ ME +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
+P+ + +LI GR EA+S++H + G SPD +T ++L+ ++
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 141/349 (40%), Gaps = 36/349 (10%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL--- 240
TY +L AG + MK G PN+ + +V + + G AT +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 241 -------------------------------EEIRERKISLDTHIYNSIIDTFGKYGELG 269
E +R + + DT +N +I G+
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAE 223
Query: 270 EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY-PDPKIFVTI 328
+AL+L M G P+IVT+N+LI+ C+ + KA +F D++ + PD + ++
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
IS + GK + M G + VLVD + + G+ AEE + S G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
F +L + Y + G Q ++ + M G+ PN ++LINA N R ++A
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
+ + + P Y ++ F + K +E +I + ME C PD+
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 3/259 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSS--YSYTHLIEALGNVGRTSEADMLFKE 137
Y+ LI CK L++A + +++ G S +YT +I G+ EA L +
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
M+ G+ P +N+ +M+ G + T+ L+D + G+
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+ + EM +G PN+F YS ++ + KA E+L ++ + I +YN
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+ID F K G++ EA + +M+K+ +P+ +T+ LI HC +G +A+++F M G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 318 LYPDPKIFVTIISCLGEQG 336
PD +++SCL + G
Sbjct: 483 CSPDKITVSSLLSCLLKAG 501
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 3/312 (0%)
Query: 188 LLDYFVSAGRLEDTWSTINE-MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
LL+ V R+ED +E ++ + I GL G +KA E+L +
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC-GVGKAEKALELLGVMSGF 235
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV-RPNIVTWNSLIKWHCREGDYTK 305
D YN++I F K EL +A ++F ++ V P++VT+ S+I +C+ G +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
A +L DM G+YP F ++ + G+ T ++ M S G + L+D
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 366 IFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEP 425
+ + G+ + + + G+ + + L NA + +A ++L + + I P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 426 NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
M N +I+ F AG+ EA + +++ PD +T+T L+ + E I+
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 486 KRMETDGCTPDR 497
+M GC+PD+
Sbjct: 476 HKMVAIGCSPDK 487
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 140/294 (47%), Gaps = 1/294 (0%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
+T+ IL+ G+ E + M G +P+ Y+ ++ + + KA+E+ ++
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 243 IRERKI-SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
++ + S D Y S+I + K G++ EA L M + G+ P VT+N L+ + + G
Sbjct: 267 VKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAG 326
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
+ A + M G +PD F ++I G+ + +E M +RG Y+
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
+L++ + A E + L S+ ++ P ++ + + + + G +A +++ ME +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
+P+ + +LI GR EA+S++H + G SPD +T ++L+ ++
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 141/349 (40%), Gaps = 36/349 (10%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL--- 240
TY +L AG + MK G PN+ + +V + + G AT +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 241 -------------------------------EEIRERKISLDTHIYNSIIDTFGKYGELG 269
E +R + + DT +N +I G+
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAE 223
Query: 270 EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY-PDPKIFVTI 328
+AL+L M G P+IVT+N+LI+ C+ + KA +F D++ + PD + ++
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
IS + GK + M G + VLVD + + G+ AEE + S G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
F +L + Y + G Q ++ + M G+ PN ++LINA N R ++A
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
+ + + P Y ++ F + K +E +I + ME C PD+
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 3/259 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSS--YSYTHLIEALGNVGRTSEADMLFKE 137
Y+ LI CK L++A + +++ G S +YT +I G+ EA L +
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
M+ G+ P +N+ +M+ G + T+ L+D + G+
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+ + EM +G PN+F YS ++ + KA E+L ++ + I +YN
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+ID F K G++ EA + +M+K+ +P+ +T+ LI HC +G +A+++F M G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 318 LYPDPKIFVTIISCLGEQG 336
PD +++SCL + G
Sbjct: 483 CSPDKITVSSLLSCLLKAG 501
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 3/312 (0%)
Query: 188 LLDYFVSAGRLEDTWSTINE-MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
LL+ V R+ED +E ++ + I GL G +KA E+L +
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC-GVGKAEKALELLGVMSGF 235
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV-RPNIVTWNSLIKWHCREGDYTK 305
D YN++I F K EL +A ++F ++ V P++VT+ S+I +C+ G +
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
A +L DM G+YP F ++ + G+ T ++ M S G + L+D
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 366 IFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEP 425
+ + G+ + + + G+ + + L NA + +A ++L + + I P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 426 NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
M N +I+ F AG+ EA + +++ PD +T+T L+ + E I+
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 486 KRMETDGCTPDR 497
+M GC+PD+
Sbjct: 476 HKMVAIGCSPDK 487
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 5/299 (1%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TYE+++ +GRL+ + +MK + +P+ V+S +V G + +V E+
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ ++ S+ID++ K G+L AL+L+ +M+K G RPN + +I+ H + G
Sbjct: 375 QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKL 434
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
A+ +F DM++ G P P + ++ G+ D+ K + SMT+ G + + Y L
Sbjct: 435 EVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISL 494
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA--LANAYAQQGLCEQAIKVLQIMEGE 421
+ + A + + +K+ G V CA + Y + + A+K L+ M
Sbjct: 495 LTLLANKRLVDVAGKILLEMKAMGYSVD---VCASDVLMIYIKDASVDLALKWLRFMGSS 551
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
GI+ N ++ L + G Y A + + S DLV YT+++ +R + D+
Sbjct: 552 GIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDK 610
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
Y ++ Y A +LE + + + G + ++ Y+ ++ L+ + G+ KA E+ E +
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ LD Y II + K G L A KLF +M++ +RP+ ++SL+ + G
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
++ ++ +MQ G P +FV++I + GK DT + ++ M G + +Y ++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
++ + GK + A + ++ G L +P+ + L +A G + A+K+ M G+
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
P + L+ +N A + +K G S D+ LM
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%)
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
L + YN +I K +L A F K Q+ G + + T+N+L+ +G KA +
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI 300
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
+ M++ D + II L + G+ D K F+ M R + +V++ LVD G+
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK 360
Query: 370 YGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
G+ + + ++ G S +F +L ++YA+ G + A+++ M+ G PN +
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
M+I + + +G+ AM+V+ ++++G P TY+ L++ + + D IY M
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 490 TDGCTP 495
G P
Sbjct: 481 NAGLRP 486
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 121/264 (45%)
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
++ +E +DT YN+++ F G +A +++ M+K + T+ +I +
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAK 325
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
G A LF M+E+ L P +F +++ +G+ G+ DT K + M G++ +
Sbjct: 326 SGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATM 385
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
+ L+D + + GK A +K G + ++ + ++A+ G E A+ V + ME
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
G P + L+ + +G+ AM +Y+ + +G+ P L +Y +L+ + D
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVD 505
Query: 480 EVPIIYKRMETDGCTPDRKAKQML 503
I M+ G + D A +L
Sbjct: 506 VAGKILLEMKAMGYSVDVCASDVL 529
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 87/198 (43%), Gaps = 3/198 (1%)
Query: 302 DYTKALNLFSDM-QEQGLYPDPKI--FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
D+ +LF +M Q+ + D + +I L + K + CF+ G K
Sbjct: 220 DFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQ 279
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
Y L+ +F G A E ++++ L+ + + + + A+ G + A K+ Q M
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
+ + P+ + + L+++ AGR +M VY ++ G P + +L+ ++ + K
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 479 DEVPIIYKRMETDGCTPD 496
D ++ M+ G P+
Sbjct: 400 DTALRLWDEMKKSGFRPN 417
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 36/261 (13%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G S+ + LI K G LD A+ L +M+ GF+ + YT +IE+ G+ A
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+FK+M G P T TY LL+
Sbjct: 438 MTVFKDMEKAGFLP-----------------------------------TPSTYSCLLEM 462
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+G+++ N M G +P Y ++ L + + A ++L E++ S+D
Sbjct: 463 HAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+ ++ + K + ALK M G++ N L + + G Y A L
Sbjct: 523 V-CASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLE 581
Query: 312 DMQEQGLYPDPKIFVTIISCL 332
+ D ++ +I++ L
Sbjct: 582 TLVHSAGKVDLVLYTSILAHL 602
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 169/385 (43%), Gaps = 1/385 (0%)
Query: 112 SYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXX 171
S+ ++ L+ G +++ ++F+++ CGLKP L +
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+MV G+ Y +L+ +G E ++EM+ KG P+ F Y+ ++ +Y
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
M +A V + + ++ + YNS I F + G + EA +LF ++ K+ V N VT+
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYT 311
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI +CR D +AL L M+ +G P + +I+ L E G+ + M+ +
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
+ L++ + + +A + + + G+ + + AL + + + E A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+ L M +G P + L++ F N + E + ++ G+ D+ Y L++
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPD 496
+ ++ D ++++ ME G D
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGD 516
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 184/412 (44%), Gaps = 1/412 (0%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
S +S L+ K G ++ ++ + Q+ + G + + T L+ +L T +FK
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
+M+ G+ +++YN+ EM + G++ TY L+ +
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
+ S + M+ G PN Y+ + + G ++AT + EI++ ++ + Y
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYT 311
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
++ID + + ++ EAL+L M+ G P +VT+NS+++ C +G +A L ++M +
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
+ PD T+I+ + + K + M G K Y L+ F + + +NA
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+E + ++ +G + L + + Q ++ K+L+ E G+ ++ + LI
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
+ A ++ +++ G+ D V +TT+ A+ RT K E ++ M
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 152/331 (45%), Gaps = 13/331 (3%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPN----SFVYSKIVGLYRDNGMWKKATE 238
+ L+ Y+ AG + D+ +++ G +P+ + + + +V + +WK
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK---- 189
Query: 239 VLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHC 298
+ +++ + + + H+YN ++ K G+ +A KL +M+++GV P+I T+N+LI +C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 299 REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
++ + +AL++ M+ G+ P+ + + I +G+ + F + +
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANH-V 308
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQ 416
Y L+D + + A + ++S G SP + + ++ + G +A ++L
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGF--SPGVVTYNSILRKLCEDGRIREANRLLT 366
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M G+ IEP+ + N LINA+ + A+ V + ESG+ D+ +Y L+ F +
Sbjct: 367 EMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVL 426
Query: 477 KFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ + M G +P L D
Sbjct: 427 ELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 149/348 (42%), Gaps = 1/348 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ C K G+ ++A LL++ME G ++Y LI EA + M
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P + YN E+ D + TY L+D + ++
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDID 324
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M+ +GF P Y+ I+ ++G ++A +L E+ +KI D N++I
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + K ++ A+K+ KM + G++ ++ ++ +LI C+ + A M E+G
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P + ++ Q K D I K E RG A+Y L+ + + A+
Sbjct: 445 PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVL 504
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
++++ +G++ IF +A AY + G +A + +M + N+
Sbjct: 505 FESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNL 552
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 155/377 (41%), Gaps = 58/377 (15%)
Query: 174 VDSGIWRTRETYEIL--LDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYS-KIVGLYRDN 230
VDSG+ ++ T +++ L F G +WS +S S K++ + +
Sbjct: 34 VDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKH 93
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
+K A ++L+++ +R++ + S++ G E E + ++ +W
Sbjct: 94 KHFKTAHQLLDKLAQRELLSSPLVLRSLV---GGVSEDPEDV------------SHVFSW 138
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
L+ ++ + G ++ +F ++ GL P + +++ L +Q DT+ K F+ M
Sbjct: 139 --LMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVK 196
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLC 408
G VY VLV + G + AE+ + ++ +GV P+IF L + Y ++ +
Sbjct: 197 LGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVF--PDIFTYNTLISVYCKKSMH 254
Query: 409 EQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES------------ 456
+A+ V ME G+ PNIV N I+ FS GR EA ++ IK+
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLI 314
Query: 457 ----------------------GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCT 494
G SP +VTY ++++ + E + M
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 495 PDRKAKQMLQDALTALE 511
PD L +A +E
Sbjct: 375 PDNITCNTLINAYCKIE 391
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 185/452 (40%), Gaps = 41/452 (9%)
Query: 43 SNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQ------LISKCCKEGNLDRA 96
S++ I N+ + S+ T+ P E + +F + ++ + + + A
Sbjct: 6 SSVLINNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEA 65
Query: 97 MSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXX 156
+SL Q + +GF+ SY+ LI L D + + + Y ++ R +L+
Sbjct: 66 LSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQH 125
Query: 157 XXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPN 216
++ RT ++ L++ V G LE S + K +PN
Sbjct: 126 YGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185
Query: 217 SFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFV 276
S ++ ++ + D W+ A +V +E+ E ++ YNS+I + ++G+A L
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 277 KMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQG 336
M K+ +RPN VT+ L+K C +G+Y +A L DM+ +G P + ++S LG++G
Sbjct: 246 DMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRG 305
Query: 337 KWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC 396
+ D K M R K +Y +LV+ C + C
Sbjct: 306 RIDEAKLLLGEMKKRRIKPDVVIYNILVNHL-----------CTE--------------C 340
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES 456
+ AY +VL M+ +G +PN M+I+ F + ++V + + S
Sbjct: 341 RVPEAY----------RVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLAS 390
Query: 457 GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
P T+ ++ I+ D + + M
Sbjct: 391 RHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 131/313 (41%)
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
E+ S ++ + GF+ + YS ++ + + ++L +R R + ++ +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I +GK G + +A+ +F K+ I + N+LI G+ KA + F ++ L
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ F +I ++ W+ K F+ M + Y L+ + A+
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
++ + + + + F L +G +A K++ ME G +P +V +L++
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
GR EA + +K+ + PD+V Y L+ + E + M+ GC P+
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 499 AKQMLQDALTALE 511
+M+ D +E
Sbjct: 363 TYRMMIDGFCRIE 375
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 171/415 (41%), Gaps = 40/415 (9%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
LSS Y+ +I K G + A +M G ++ ++ +I GN G+ E L
Sbjct: 296 LSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSL 355
Query: 135 FKEM-IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
K M ++C P YNI EM D G+ +Y LL F
Sbjct: 356 MKTMKLHCA--PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFS 413
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
+E+ I EM + + + S + +Y + M +K+ + ++ +
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSE 472
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
Y++ ID +G+ G L EA ++F+ Q+ R ++ +N +IK + KA LF M
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVNKR-TVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
G+ PD KC Y LV I
Sbjct: 532 MSYGVTPD---------------------KC--------------TYNTLVQILASADMP 556
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
++ ++ G + +CA+ +++ + G A +V + M IEP++V+ +L
Sbjct: 557 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
INAF++ G +AMS +KE+G+ + V Y +L+K + + DE IY+++
Sbjct: 617 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 145/338 (42%), Gaps = 21/338 (6%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EM+ GI TY L+D + G + +M G QP+ ++ +Y+
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271
Query: 232 MWKKATEVL------EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRP 285
++KA E E + + L ++ YN++IDT+GK G++ EA + F +M +EG+ P
Sbjct: 272 EFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 331
Query: 286 NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF 345
VT+N++I + G + +L M+ PD + + +IS + + F
Sbjct: 332 TTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYF 390
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQ 405
+ M G K Y L+ F + AE + + + V + AL Y +
Sbjct: 391 KEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEA 450
Query: 406 GLCEQA------IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+ E++ V M EG NI +A+ G EA V+ +E
Sbjct: 451 EMLEKSWSWFKRFHVAGNMSSEGYSANI-------DAYGERGYLSEAERVFICCQEVN-K 502
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
++ Y ++KA+ +K ++ +++ M + G TPD+
Sbjct: 503 RTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 175/454 (38%), Gaps = 63/454 (13%)
Query: 94 DRAMSLLAQMEALG-FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNI 152
+RA+ + ++ G ++L+ Y ++ LG + L+ EMI G+KP + Y
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 153 XXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDT------WSTIN 206
+M G+ T I+L + A + WS
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 207 EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG 266
+S+ Y+ ++ Y +G K+A+E + + E I T +N++I +G G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
+LGE L +K K P+ T+N LI H + D +A F +M++ GL PDP +
Sbjct: 348 QLGEVTSL-MKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 327 TII-------------------------------SCLGE--------QGKWDTIKK--CF 345
T++ S L + W K+
Sbjct: 407 TLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVA 466
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE---CVQALKSEGVLVSPNIFCALANAY 402
+M+S G Y+ +D +G+ G AE C Q + V+ + + AY
Sbjct: 467 GNMSSEG-------YSANIDAYGERGYLSEAERVFICCQEVNKRTVIE----YNVMIKAY 515
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
CE+A ++ + M G+ P+ N L+ ++A + ++E+G D
Sbjct: 516 GISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDC 575
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ Y ++ +F++ + + +YK M PD
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPD 609
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 141/315 (44%), Gaps = 8/315 (2%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
RT Y +++ + + E M G P+ Y+ +V + M K
Sbjct: 503 RTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCY 562
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
LE++RE D Y ++I +F K G+L A +++ +M + + P++V + LI
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK-KYGA 358
G+ +A++ M+E G+ + I+ ++I + G D + + + NK +Y
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 359 VYA--VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
VY +++++ + + AE ++K G + F + Y + G E+A ++ +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRGE-ANEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTY----TTLMKAF 472
M I + + N ++ F+ GR+ EA+ + + SG+ PD T+ T LMK
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 473 IRTKKFDEVPIIYKR 487
+ K ++ I K+
Sbjct: 802 MSKKAVRKIEEIRKK 816
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 126/285 (44%), Gaps = 12/285 (4%)
Query: 233 WKKATEVLEEIRERKI-SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
W++A E+ E + + L+ YN ++ GK + L+ +M ++G++P T+
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYG 226
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI + + G AL M + G+ PD ++ + ++ ++ F+ +
Sbjct: 227 TLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCD 286
Query: 352 GNKKYGAV------YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQ 405
NK V Y ++D +G+ G+ + A E + + EG++ + F + + Y
Sbjct: 287 ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN 346
Query: 406 GLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTY 465
G + +++ M+ P+ N+LI+ + A + + +K+ G+ PD V+Y
Sbjct: 347 GQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405
Query: 466 TTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTAL 510
TL+ AF +E + M+ D D + Q ALT +
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEMDDDNVEID----EYTQSALTRM 446
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y LI+ GN+ +AMS + M+ G +S Y LI+ VG EA+ ++++++
Sbjct: 613 YGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL 672
Query: 140 Y-CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
C ++Y T +++ + +
Sbjct: 673 QSCNKTQYPDVY---------------------------------TSNCMINLYSERSMV 699
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ + MK +G + N F ++ ++ +Y+ NG +++AT++ +++RE KI D YNS+
Sbjct: 700 RKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSV 758
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ F G EA++ F +M G++P+ T+ SL + G KA+ +++++ +
Sbjct: 759 LGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
Query: 319 YPDPKIFVTIISCL 332
+++++ +S L
Sbjct: 819 KRGLELWISTLSSL 832
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 136/351 (38%), Gaps = 38/351 (10%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
+SSE YS I + G L A + + + + + Y +I+A G +A L
Sbjct: 469 MSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACEL 527
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
F+ M+ G+ P YN +M ++G Y ++ FV
Sbjct: 528 FESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVK 587
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHI 254
G+L EM +P+ VY ++ + D G ++A +E ++E I ++ I
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVR---PNIVTWNSLIKWHCREGDYTKALNLFS 311
YNS+I + K G L EA ++ K+ + + P++ T N +I + KA +F
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFD 707
Query: 312 DMQEQG----------------------------------LYPDPKIFVTIISCLGEQGK 337
M+++G + DP + +++ G+
Sbjct: 708 SMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGR 767
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
+ + F+ M S G + + + L I + G + A ++ ++ + +
Sbjct: 768 FKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 176/407 (43%), Gaps = 2/407 (0%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
L+ +S L+ K G +D + LL + + S+ Y LI + G+ ++A +
Sbjct: 486 LNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKI 545
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
+ + + L++ + + SG+ R + I++ +V
Sbjct: 546 YNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVK 605
Query: 195 AGRLEDTWSTINEM-KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
AG LE+ S + M + K P+ +++ ++ +Y+ + K + IR+ I +
Sbjct: 606 AGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQE 665
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+YN +I+ + L E F +M + G PN VT+N L+ + + + K LF
Sbjct: 666 MYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLA 725
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
+ G+ D + TII+ G+ + + ++M G Y L+D +G+ +
Sbjct: 726 KRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQM 784
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+ ++ +K + + N Y +QG ++ VL+ ++ G+ P++ N L
Sbjct: 785 EKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTL 844
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
I A+ G EA+ + ++ + PD VTYT L+ A R +F E
Sbjct: 845 IKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLE 891
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 160/399 (40%), Gaps = 73/399 (18%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++ L+ +V G ++D + E K + S +Y ++ +++G A ++
Sbjct: 490 SFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHK 549
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
E ++ HI +++ID + GE EA KL++ ++ GV + + ++ +++ + + G
Sbjct: 550 MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSL 609
Query: 304 TKALNLFSDMQEQ------------------------------------GLYPDPKIFVT 327
+A ++ M EQ G++ + +++
Sbjct: 610 EEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNC 669
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ------------------ 369
+I+C D + FE M G + VL+D++G+
Sbjct: 670 VINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG 729
Query: 370 -------------YGK---FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIK 413
YGK + N ++ ++ +G VS + L +AY + E+
Sbjct: 730 VVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRS 789
Query: 414 VLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
+L+ M+ P+ N++IN + G E V +KESG+ PDL +Y TL+KA+
Sbjct: 790 ILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG 849
Query: 474 RTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+E + K M PD K + +TAL R
Sbjct: 850 IGGMVEEAVGLVKEMRGRNIIPD---KVTYTNLVTALRR 885
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/511 (18%), Positives = 208/511 (40%), Gaps = 60/511 (11%)
Query: 28 ATAIQFSKIPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISK- 86
A F + N L NL++ N ++ N A +PG+ L E + ++ +
Sbjct: 102 ARKFSFRRGSNDLELENLFVNNGEID----------VNYSAIKPGQSL--EHCNGILKRL 149
Query: 87 -CCKEGNLDRAMSLLAQMEALGFQLSSY-SYTHLIEALGNVGRTSEADMLFKEMIYCGL- 143
C + N A+ M G + ++ +Y+ ++ LG A+ L KE+ CG
Sbjct: 150 ESCSDTN---AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKEL--CGFH 204
Query: 144 --KPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDT 201
+ ++N M++ G+ T +L+ + +E+
Sbjct: 205 EFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEA 264
Query: 202 WSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDT 261
+ M+ G S YS ++ +Y ++ KA EV++ +++ ++ L + +++
Sbjct: 265 EFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNA 323
Query: 262 FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWH----------------C------- 298
+ + G++ A + V M+ G PNI+ +N+LI + C
Sbjct: 324 YSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPD 383
Query: 299 ------------REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
R +Y +A + + +++ G P+ T+I+ + G D K E
Sbjct: 384 ETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIE 443
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
MT G + Y ++ +++ + + GK ++ + ++ F +L AY + G
Sbjct: 444 DMTGIGCQ-YSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHG 502
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYT 466
+ + + +L+ + + ++LI + +G+ +A+ +Y+H ES +L +
Sbjct: 503 MVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITS 562
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
T++ + +F E +Y +++ G DR
Sbjct: 563 TMIDIYTVMGEFSEAEKLYLNLKSSGVVLDR 593
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 109/249 (43%), Gaps = 1/249 (0%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
+ G + E Y+ +I+ C + LD +M GF ++ ++ L++ G
Sbjct: 657 KSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFK 716
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
+ + LF G+ ++ YN M G + E Y LL
Sbjct: 717 KVNELFLLAKRHGVVDVIS-YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLL 775
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
D + ++E S + MK P+ + Y+ ++ +Y + G + +VL+E++E +
Sbjct: 776 DAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLG 835
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
D YN++I +G G + EA+ L +M+ + P+ VT+ +L+ R ++ +A+
Sbjct: 836 PDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKW 895
Query: 310 FSDMQEQGL 318
M++ G+
Sbjct: 896 SLWMKQMGI 904
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 168/403 (41%), Gaps = 17/403 (4%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+++ CK GN+ AM L+ +ME G+ ++ +Y L+ L +G +++ + ++
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
GL P Y+ E++ G +Y +LL F GR +
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + E+ KGF+ N Y+ ++ +G W++A +L E+ + YN +I
Sbjct: 264 DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 260 DTFGKYGELGEALKLFVKMQK--EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
++ +G +AL++ +M K R ++N +I C+EG + +M +
Sbjct: 324 NSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR 383
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK-------YGAVYAVLVDIFGQY 370
P+ + I S K +++ F + S NK+ Y +V L +
Sbjct: 384 CKPNEGTYNAIGSLCEHNSK---VQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTF 440
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM-EGEGIEPNIVM 429
FQ E + G + + AL +G+ A++VL IM E E +P +
Sbjct: 441 AAFQLLYEMTRC----GFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDN 496
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
N +I R AM V+ + E P+ TY L++
Sbjct: 497 FNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 539
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 138/313 (44%), Gaps = 3/313 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L++ CKEG D AM+L ++ A GF+ + SY L+ L GR EA+ L EM
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV--DSGIWRTRETYEILLDYFVSAGR 197
P + YNI EM + T +Y ++ G+
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK 368
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
++ ++EM + +PN Y+ I L N ++A +++ + ++ Y S
Sbjct: 369 VDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKS 428
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE-Q 316
+I + + G A +L +M + G P+ T+++LI+ C EG +T A+ + S M+E +
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESE 488
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
P F +I L + + D + FE M + YA+LV+ + + A
Sbjct: 489 NCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELA 548
Query: 377 EECVQALKSEGVL 389
+E + L+ V+
Sbjct: 549 KEVLDELRLRKVI 561
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 7/295 (2%)
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
L D++S + + G +PN ++++ KKA V+E + I D Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+++ K G +G A++L KM+ G N VT+N+L++ C G ++L + ++G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
L P+ + ++ ++ D K + + +G + Y VL+ F + G+ +A
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 378 ECVQALKSEGV---LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
+ L ++G +VS NI L G E+A +L M+G P++V N+LI
Sbjct: 267 ALFRELPAKGFKANVVSYNI---LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
N+ + GR +A+ V + + G VT T+ R K +V ++ K ++
Sbjct: 324 NSLAFHGRTEQALQVLKEMSK-GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLD 377
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/467 (20%), Positives = 185/467 (39%), Gaps = 75/467 (16%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+QL+ CK L +A+ ++ M + G + +YT+L+ L G A L +
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVE---- 165
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
+M D G TY L+ G L
Sbjct: 166 -------------------------------KMEDHGYPSNTVTYNALVRGLCMLGSLNQ 194
Query: 201 TWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + + KG PN+F YS ++ Y++ G +A ++L+EI + + YN ++
Sbjct: 195 SLQFVERLMQKGLAPNAFTYSFLLEAAYKERGT-DEAVKLLDEIIVKGGEPNLVSYNVLL 253
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ----- 314
F K G +A+ LF ++ +G + N+V++N L++ C +G + +A +L ++M
Sbjct: 254 TGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRA 313
Query: 315 -------------------EQGLY-------PDPKIFVT------IISCLGEQGKWDTIK 342
EQ L + + VT +I+ L ++GK D +
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVV 373
Query: 343 KCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAY 402
KC + M R K Y + + K Q A +Q+L ++ + + + ++ +
Sbjct: 374 KCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSL 433
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES-GVSPD 461
++G A ++L M G +P+ + LI G + AM V ++ES P
Sbjct: 434 CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPT 493
Query: 462 LVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
+ + ++ + ++ D +++ M P+ +L + +
Sbjct: 494 VDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIA 540
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI 341
G +PN+ L+ C+ KA+ + M G+ PD + +++ L ++G
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 342 KKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC---AL 398
+ E M G Y LV G + + V+ L +G+ +PN F L
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL--APNAFTYSFLL 218
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
AY ++G ++A+K+L + +G EPN+V N+L+ F GR +AM+++ + G
Sbjct: 219 EAAYKERGT-DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
++V+Y L++ +++E + M+ P +L ++L
Sbjct: 278 KANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 69/152 (45%)
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ 404
ES+ + G+K A L+ + + + A ++ + S G++ + + L N +
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
+G A+++++ ME G N V N L+ G +++ + + G++P+ T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
Y+ L++A + + DE + + G P+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPN 245
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 149/345 (43%), Gaps = 46/345 (13%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
G TY +LLD V + + +++MK + + ++ ++ + + + K
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKV 143
Query: 237 TE---VLEEIRERKISLD--THIYNSIIDTFGKYGELGEALKLFVKMQKE-GVRPNIVTW 290
E +++ I K SL+ + N +ID+ GE+ + KL + + G++PN +
Sbjct: 144 MEMFNLIQVIARVKPSLNAISTCLNLLIDS----GEVNLSRKLLLYAKHNLGLQPNTCIF 199
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGL-YPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
N L+K HC+ GD A + +M+ G+ YP+ + T++ CL + + FE M
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
S+ EG+ P F + N + + G E
Sbjct: 260 SK----------------------------------EGISPDPVTFNVMINGFCRAGEVE 285
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A K+L M+ G PN+ + L+N F G+ EA + +K++G+ D V YTTLM
Sbjct: 286 RAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLM 345
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERRS 514
F R + DE + M+ C D ++ L++ E RS
Sbjct: 346 NCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS-EGRS 389
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 2/299 (0%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQ-PNSFVYSKIVGLYRDNGMWKKATEVLEE- 242
+ IL+ + G + + + EMK G PNS YS ++ + K+A E+ E+
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
I + IS D +N +I+ F + GE+ A K+ M+K G PN+ +++L+ C+ G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
+A F ++++ GL D + T+++C G+ D K M + + Y V
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
++ G+ + A + + SEGV ++ + + NA G E+A+K L +M G
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
I P+ N L+ +G + V G+ P ++ ++++ + +K V
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHV 497
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 135/294 (45%), Gaps = 35/294 (11%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQL-SSYSYTHLIEALGNVGRTSE 130
G + ++ ++ L+ CK G+++ A ++ +M+ G +S +Y+ L++ L R+ E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
A LF++MI GI T+ ++++
Sbjct: 251 AVELFEDMIS----------------------------------KEGISPDPVTFNVMIN 276
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
F AG +E ++ MK G PN + YS ++ + G ++A + +E+++ + L
Sbjct: 277 GFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKL 336
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
DT Y ++++ F + GE EA+KL +M+ R + +T+N +++ EG +AL +
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
+G++ + + I++ L G+ + K M+ RG + A + LV
Sbjct: 397 DQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 148/310 (47%), Gaps = 1/310 (0%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
E + +L+ F SA ++ ++EM GF+P+ +V+ ++ +G K A ++ E+
Sbjct: 184 ELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFED 243
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+R R ++ + S++ + + G++ EA + V+M + G P+IV + +L+ + G
Sbjct: 244 MRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGK 302
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
A +L DM+ +G P+ + +I L + + + K F M + Y
Sbjct: 303 MADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTA 362
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
LV F ++GK + + +G++ S + + A+ ++ E+ +++++ M
Sbjct: 363 LVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVP 482
P+I + N++I G EA+ +++ ++E+G+SP + T+ ++ E
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482
Query: 483 IIYKRMETDG 492
+K M T G
Sbjct: 483 DHFKEMVTRG 492
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 178/443 (40%), Gaps = 74/443 (16%)
Query: 65 NPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGN 124
NP+ P E + L+ + + +A+ +L +M GF+ Y + L++AL
Sbjct: 177 NPQLIEP------ELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCK 230
Query: 125 VGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRET 184
G +A LF++M L + +M ++G
Sbjct: 231 HGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVD 289
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y LL + +AG++ D + + +M+ +GF+PN+ Y+ ++ ++A +V E+
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME 349
Query: 245 ERKISLDTHIYNSIIDTFGKYGELG----------------------------------- 269
+ D Y +++ F K+G++
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 270 EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTII 329
E L+L KM++ P+I +N +I+ C+ G+ +A+ L+++M+E GL P FV +I
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 330 SCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
+ L QG F+ M +RG +++V QYG + V LK + +
Sbjct: 470 NGLASQGCLLEASDHFKEMVTRG------LFSV-----SQYGTLKLLLNTV--LKDKKLE 516
Query: 390 VSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSV 449
++ +++ + + +G CE N++ + I+A + G EA S
Sbjct: 517 MAKDVWSCITS----KGACEL---------------NVLSWTIWIHALFSKGYEKEACSY 557
Query: 450 YHHIKESGVSPDLVTYTTLMKAF 472
+ E P T+ LMK
Sbjct: 558 CIEMIEMDFMPQPDTFAKLMKGL 580
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 129/317 (40%), Gaps = 41/317 (12%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQ---PNSFVYSKIVGLYRDNGMWKKATEV 239
E Y+ ++ + W I EM+ + Q P FV +V + M KKA EV
Sbjct: 148 EVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVV--LVQRFASADMVKKAIEV 205
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
L+E+ + D +++ ++D K+G + +A KLF M+ N+ + SL+ CR
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCR 264
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
G +A + M E G PD I+
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPD------IVD----------------------------- 289
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
Y L+ + GK +A + ++ ++ G + N + L A + E+A+KV ME
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME 349
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
E ++V L++ F G+ + V + + G+ P +TY +M A + + F+
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 480 EVPIIYKRMETDGCTPD 496
E + ++M PD
Sbjct: 410 ECLELMEKMRQIEYHPD 426
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 9/258 (3%)
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+ E + L + +++ G G LG ++ Q +I + S++K +
Sbjct: 104 LNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCH-SIEVYKSMVKILSKMRQ 162
Query: 303 YTKALNLFSDM-QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE---SMTSRGNKKYGA 358
+ L +M +E +P++FV ++ D +KK E M G +
Sbjct: 163 FGAVWGLIEEMRKENPQLIEPELFVVLVQRFASA---DMVKKAIEVLDEMPKFGFEPDEY 219
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
V+ L+D ++G ++A + + ++ V+ F +L + + G +A VL M
Sbjct: 220 VFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 278
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
G EP+IV L++ ++NAG+ +A + ++ G P+ YT L++A + +
Sbjct: 279 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 479 DEVPIIYKRMETDGCTPD 496
+E ++ ME C D
Sbjct: 339 EEAMKVFVEMERYECEAD 356
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 35/189 (18%)
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGV-LVSPNIFCALANAYAQQGLCEQAIKVLQI 417
VY +V I + +F ++ ++ E L+ P +F L +A + ++AI+VL
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDE 208
Query: 418 MEGEGIEPNIVMLNMLINA----------------------------------FSNAGRY 443
M G EP+ + L++A + G+
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKM 268
Query: 444 MEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
MEA V + E+G PD+V YT L+ + K + + + M G P+ +L
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 504 QDALTALER 512
AL ++R
Sbjct: 329 IQALCKVDR 337
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
++ET+ ++ + A ++++ ++M+ GF+ S +++++ + A +V
Sbjct: 161 SKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF 220
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+++++++ D Y +++ +G+ L ++ +M+ EG P++V + +I HC+
Sbjct: 221 DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 280
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
Y +A+ F++M+++ P P IF ++I+ LG + K + + FE S G Y
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
LV + + ++A + V ++ +GV + + + + + ++A +V Q M
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM-- 398
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
EP + +++ F N R A+ ++ +K GV P + +++L+ A K DE
Sbjct: 399 -SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Query: 481 VPIIYKRMETDGCTP 495
+ M G P
Sbjct: 458 ACEYFNEMLDVGIRP 472
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 140/368 (38%), Gaps = 38/368 (10%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
LS E ++ + + + + A+ +ME GF++ S + +++ L +A +
Sbjct: 160 LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKV 219
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
F +M +P + Y I EM D G Y I+++
Sbjct: 220 FDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCK 279
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHI 254
A + E+ NEM+ + +P+ HI
Sbjct: 280 AKKYEEAIRFFNEMEQRNCKPSP-----------------------------------HI 304
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
+ S+I+ G +L +AL+ F + + G T+N+L+ +C A +M+
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 364
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQ 374
+G+ P+ + + I+ L + + +++M+ + Y ++V +F +
Sbjct: 365 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPT---VSTYEIMVRMFCNKERLD 421
Query: 375 NAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI 434
A + +K +GVL ++F +L A + ++A + M GI P M + L
Sbjct: 422 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLK 481
Query: 435 NAFSNAGR 442
+ GR
Sbjct: 482 QTLLDEGR 489
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 5/263 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ +E NL R + +M+ GF+ +Y +I A + EA F EM
Sbjct: 235 YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 294
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
KP +++ SG TY L+ + + R+E
Sbjct: 295 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRME 354
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR-ERKISLDTHIYNSI 258
D + T++EM++KG PN+ Y I+ K+A EV + + E +S Y +
Sbjct: 355 DAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVS----TYEIM 410
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ F L A+K++ +M+ +GV P + ++SLI C E +A F++M + G+
Sbjct: 411 VRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Query: 319 YPDPKIFVTIISCLGEQGKWDTI 341
P +F + L ++G+ D +
Sbjct: 471 RPPGHMFSRLKQTLLDEGRKDKV 493
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 110/261 (42%), Gaps = 1/261 (0%)
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
T YN++I++ GK + L M+ + + T+ + + + R +A+ F
Sbjct: 128 TSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSK-ETFALISRRYARARKVKEAIGAFH 186
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
M+E G + F ++ L + +K F+ M + + Y +L++ +GQ
Sbjct: 187 KMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQEL 246
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
+E + +K EG + + NA+ + E+AI+ ME +P+ +
Sbjct: 247 NLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFC 306
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
LIN + + +A+ + K SG + TY L+ A+ +++ ++ M
Sbjct: 307 SLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLK 366
Query: 492 GCTPDRKAKQMLQDALTALER 512
G P+ + ++ L ++R
Sbjct: 367 GVGPNARTYDIILHHLIRMQR 387
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 3/205 (1%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLF 135
S + LI+ E L+ A+ + ++ GF L + +Y L+ A R +A
Sbjct: 301 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360
Query: 136 KEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
EM G+ P Y+I M T TYEI++ F +
Sbjct: 361 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 417
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
RL+ +EMK KG P ++S ++ +A E E+ + I H++
Sbjct: 418 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 477
Query: 256 NSIIDTFGKYGELGEALKLFVKMQK 280
+ + T G + L VKM +
Sbjct: 478 SRLKQTLLDEGRKDKVTDLVVKMDR 502
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 182/433 (42%), Gaps = 41/433 (9%)
Query: 114 SYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM 173
S T L+ L GR EA +FK + G +P L Y E+
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
SG + +++ F +G +ED + +MK G P + Y+ ++ Y G
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 234 KKATEVLEEIRER---KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
++++E+L+ + E + + +N ++ + K ++ EA ++ KM++ GVRP+ VT+
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 291 NSL-------------------------------------IKWHCREGDYTKALNLFSDM 313
N++ + +CREG L M
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
+E + + +F ++I+ E D I + M K Y+ +++ + G
Sbjct: 287 KEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYM 346
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+ A + + + GV + + LA Y + ++A ++L+ + E PN+V+ +
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTV 405
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
I+ + + G +AM V++ + + GVSP++ T+ TLM ++ K+ + + + M G
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 465
Query: 494 TPDRKAKQMLQDA 506
P+ +L +A
Sbjct: 466 KPENSTFLLLAEA 478
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 152/339 (44%), Gaps = 13/339 (3%)
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
V+ RT + L++ + GR + + + G +P+ Y+ ++ +
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQY 96
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
+ ++ E+ + LD+ +N++I+ F + G + +A++ +KM++ G+ P T+N+L
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 294 IKWHCREGDYTKALNLFSDMQEQG---LYPDPKIFVTIISCLGEQGK----WDTIKKCFE 346
IK + G ++ L M E+G + P+ + F ++ ++ K W+ +KK
Sbjct: 157 IKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKK--- 213
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE-ECVQALKSEGVLVSPNIFCAL-ANAYAQ 404
M G + Y + + Q G+ AE E V+ + + C + Y +
Sbjct: 214 -MEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
+G ++ ++ M+ +E N+V+ N LIN F V +KE V D++T
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVIT 332
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
Y+T+M A+ ++ ++K M G PD A +L
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 371
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 176/410 (42%), Gaps = 39/410 (9%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E + G +L S F++ +I+ + GN++ A+ L +M+ LG ++ +Y LI+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ + L M+ G VD G T+
Sbjct: 165 KPERSSELLDLMLEEG------------------------------NVDVG--PNIRTFN 192
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA-TEVLEE-IR 244
+L+ + ++E+ W + +M+ G +P++ Y+ I Y G +A +EV+E+ +
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
+ K + ++ + + G + + L+ +M++ V N+V +NSLI D
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
+ + M+E + D + T+++ G + + F+ M G K Y++L
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIMEGEG 422
+ + + + AEE ++ L E PN IF + + + G + A++V M G
Sbjct: 373 KGYVRAKEPKKAEELLETLIVES---RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG 429
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ PNI L+ + + +A V ++ GV P+ T+ L +A+
Sbjct: 430 VSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 479
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 144/300 (48%), Gaps = 10/300 (3%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
G + N + + ++ +Y NG + + +V +++R +S +NSI+ ++ K G + +A
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDA 174
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+ L +M+ G++P+IVTWNSL+ + +G A+ + MQ GL P +++
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGA-VYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
+ E G + K R Y V L+D++ + G A + ++ ++
Sbjct: 235 VAEPGHL-KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVA 293
Query: 391 SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
++ L+ A L + A ++ ME EGI+P+ + N L + ++ G+ +A+ V
Sbjct: 294 WNSLVSGLSYAC----LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 451 HHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTAL 510
+KE GV+P++V++T + + F ++ +M+ +G P+ L L L
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 167/400 (41%), Gaps = 12/400 (3%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
R G E + + LI + G L+ + + M+ S+ ++ + +G
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVD 172
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
+A L EM CGLKP + +N M +G+ + + LL
Sbjct: 173 DAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLL 232
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
G L+ + + + +V + ++ +Y G A V + + + I
Sbjct: 233 QAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV 292
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
+NS++ L +A L ++M+KEG++P+ +TWNSL + G KAL++
Sbjct: 293 ----AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
M+E+G+ P+ + I S + G + K F M G A + L+ I G
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 408
Query: 370 YGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
+ +E + ++ + AL + Y + G + AI++ ++ + +
Sbjct: 409 LSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLAS---- 464
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
N ++ ++ GR E ++ + + E+G+ PD +T+T+++
Sbjct: 465 WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 123/300 (41%), Gaps = 52/300 (17%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ L + + G+ E I +MK KG PN ++ I NG ++ A +V ++
Sbjct: 328 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Query: 244 RE-----------------------------------RKISLDTHIYNSIIDTFGKYGEL 268
+E + + D ++ +++D +GK G+L
Sbjct: 388 QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDL 447
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
A+++F ++ + ++ +WN ++ + G + + FS M E G+ PD F ++
Sbjct: 448 QSAIEIFWGIKNK----SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSV 503
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV-----LVDIFGQYGKFQNAEECVQAL 383
+S G K F+ M SR YG + + +VD+ G+ G A + +Q +
Sbjct: 504 LSVCKNSGLVQEGWKYFDLMRSR----YGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM 559
Query: 384 KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRY 443
+ F + + L E A K LQ++E N M+IN +SN R+
Sbjct: 560 SLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPH----NSANYMMMINLYSNLNRW 615
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 113/221 (51%), Gaps = 8/221 (3%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
DT + ++ + +G+ LG A KLF +M K + + WN ++ + R G++ KA+ LF
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELF 77
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+MQ G V ++ + + ++ + G + ++ L+ ++ +
Sbjct: 78 REMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRN 137
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
GK + + + ++K L S N ++ ++Y + G + AI +L ME G++P+IV
Sbjct: 138 GKLELSRKVFNSMKDRN-LSSWN---SILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTW 193
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
N L++ +++ G +A++V ++ +G+ P + ++L++A
Sbjct: 194 NSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 153/321 (47%), Gaps = 4/321 (1%)
Query: 176 SGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK 235
SG+ ++E E +L+ F +AG L + +E K + ++ + Y ++ +K
Sbjct: 94 SGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSE-KQRHYEHSVRAYHMMIESTAKIRQYKL 152
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
+++ +R++K+ L+ + ++ + + ++ EA+ F M+K + PN+V +N L+
Sbjct: 153 MWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLS 211
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
C+ + KA +F +M+++ PD K + ++ G++ ++ F M G
Sbjct: 212 ALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHP 270
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
Y+++VDI + G+ A V+++ + I+ L + Y + E+A+
Sbjct: 271 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
ME G++ ++ + N LI AF A R V +K GV+P+ + +++ I
Sbjct: 331 LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIER 390
Query: 476 KKFDEVPIIYKRMETDGCTPD 496
+ DE ++++M C PD
Sbjct: 391 GEKDEAFDVFRKM-IKVCEPD 410
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 148/342 (43%), Gaps = 39/342 (11%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
ET+ I++ + A ++++ N M+ PN ++ ++ + +KA EV E
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 228
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+R+R + D+ Y+ +++ +GK L +A ++F +M G P+IVT++ ++ C+ G
Sbjct: 229 MRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR 287
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
+AL + M P I+ ++ G + + + F M G K AV+
Sbjct: 288 VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 347
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPN----------------------------- 393
L+ F + + +N ++ +KS+GV +PN
Sbjct: 348 LIGAFCKANRMKNVYRVLKEMKSKGV--TPNSKSCNIILRHLIERGEKDEAFDVFRKMIK 405
Query: 394 -------IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
+ + + ++ E A KV + M +G+ P++ ++LIN +A
Sbjct: 406 VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKA 465
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
+ + E G+ P VT+ L + I+ ++ D + + ++M
Sbjct: 466 CVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ L+S CK N+ +A + M F S +Y+ L+E G +A +F+EMI
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + TY I++D AGR++
Sbjct: 265 DAGCHPDI-----------------------------------VTYSIMVDILCKAGRVD 289
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + M +P +F+YS +V Y ++A + E+ + D ++NS+I
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K + ++ +M+ +GV PN + N +++ G+ +A ++F M +
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCE 408
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
PD + +I E+ + +T K ++ M +G ++VL++
Sbjct: 409 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLIN 454
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 1/272 (0%)
Query: 77 SEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFK 136
S+ YS L+ KE NL +A + +M G +Y+ +++ L GR EA + +
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 137 EMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAG 196
M KP +Y++ EM SG+ + L+ F A
Sbjct: 297 SMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKAN 356
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
R+++ + + EMK KG PNS + I+ + G +A +V ++ + D Y
Sbjct: 357 RMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYT 415
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
+I F + E+ A K++ M+K+GV P++ T++ LI C E KA L +M E
Sbjct: 416 MVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEM 475
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESM 348
G+ P F + L ++ + D +K E M
Sbjct: 476 GIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 151/369 (40%), Gaps = 41/369 (11%)
Query: 108 FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXX 167
+Q +Y L+ LG G+ + A LF EM+ GL+P
Sbjct: 120 YQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEP---------------------- 157
Query: 168 XXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGF---QPNSFVYSKIV 224
T E Y LL + + ++D +S ++ KMK F QP+ F YS ++
Sbjct: 158 -------------TVELYTALLAAYTRSNLIDDAFSILD--KMKSFPQCQPDVFTYSTLL 202
Query: 225 GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM-QKEGV 283
D + + +E+ ER I+ +T N ++ +G+ G + K+ M
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
+P++ T N ++ G + + + G+ P+ + F +I G++ +D +
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSS 322
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
E M + Y +++ F G +N E ++SEG+ FC L N YA
Sbjct: 323 VMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYA 382
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
GL + I +Q+ I N N +I+A + A +E VY +KE D
Sbjct: 383 NAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSR 442
Query: 464 TYTTLMKAF 472
T+ +++A+
Sbjct: 443 TFEIMVEAY 451
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
+QP Y K++ L +G +A ++ +E+ E + +Y +++ + + + +A
Sbjct: 120 YQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAF 179
Query: 273 KLFVKMQK-EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+ KM+ +P++ T+++L+K + +L+ +M E+ + P+ ++S
Sbjct: 180 SILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSG 239
Query: 332 LGEQGKWDTIKKCFESM-TSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
G G++D ++K M S K +++ +FG GK E + ++ G+
Sbjct: 240 YGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299
Query: 391 SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
F L +Y ++ + ++ V++ M N +I AF++ G +
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTF 359
Query: 451 HHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
++ G+ D T+ L+ + F +V
Sbjct: 360 DQMRSEGMKADTKTFCCLINGYANAGLFHKV 390
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 10/243 (4%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALG-FQLSSYSYTHLIEALGNVGRTSE 130
G E + E Y+ L++ + +D A S+L +M++ Q ++Y+ L++A + +
Sbjct: 154 GLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDL 213
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS-----GIWRTRETY 185
D L+KEM + P NI +M+ S +W T
Sbjct: 214 VDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVW----TM 269
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE 245
I+L F + G+++ S + + G +P + ++ ++G Y M+ K + V+E +R+
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRK 329
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
+ T YN+II+ F G+ F +M+ EG++ + T+ LI + G + K
Sbjct: 330 LEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHK 389
Query: 306 ALN 308
++
Sbjct: 390 VIS 392
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 145/324 (44%), Gaps = 2/324 (0%)
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
+SG+ + Y L+ +G+++ + ++M G + N + ++ G
Sbjct: 495 ESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVA 554
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG--VRPNIVTWNS 292
KA +R + + D ++N++I G+ G + A + +M+ E + P+ ++ +
Sbjct: 555 KAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGA 614
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
L+K C G +A ++ + + G+ P+++ ++ + G WD ++ M +
Sbjct: 615 LMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKD 674
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
++ L+D+ G A +Q KS+G+ + + +L A ++A+
Sbjct: 675 VTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKAL 734
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
++ + ++ + P I +N LI A + +AM IK G+ P+ +TY+ LM A
Sbjct: 735 ELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLAS 794
Query: 473 IRTKKFDEVPIIYKRMETDGCTPD 496
R F+ + + + DG +P+
Sbjct: 795 ERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 146/335 (43%), Gaps = 5/335 (1%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
T T+ +L+ S+ +E + ++ G + +Y+ ++ +G EV
Sbjct: 466 TMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVF 525
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
++ + + H + ++ID + G++ +A + ++ + V+P+ V +N+LI +
Sbjct: 526 HQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQS 585
Query: 301 GDYTKALNLFSDMQEQG--LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
G +A ++ ++M+ + + PD ++ G+ + K+ ++ + G +
Sbjct: 586 GAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE 645
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
VY + V+ + G + A + +K + V F AL + + ++A +LQ
Sbjct: 646 VYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
+ +GI + + L+ A NA + +A+ +Y IK + P + T L+ A +
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 479 DEVPIIYKRMETDGCTPDRKAKQMLQDALTALERR 513
+ ++T G P+ ML + A ER+
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSML---MLASERK 797
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 19/329 (5%)
Query: 78 EFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKE 137
+ Y+ LIS C K G +D + QM G + + +++ LI+ G+ ++A +
Sbjct: 503 KLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGI 562
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYF----- 192
+ +KP ++N EM ET+ I D+
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEM-------KAETHPIDPDHISIGAL 615
Query: 193 ----VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKI 248
+AG++E + G + VY+ V +G W A + ++++E+ +
Sbjct: 616 MKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDV 675
Query: 249 SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN 308
+ D ++++ID G L EA + + +G+R ++++SL+ C D+ KAL
Sbjct: 676 TPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALE 735
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFG 368
L+ ++ L P +I+ L E + + + + + G K Y++L+
Sbjct: 736 LYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASE 795
Query: 369 QYGKFQNAEECVQALKSEGVLVSPN-IFC 396
+ F+ + + + K +G VSPN I C
Sbjct: 796 RKDDFEVSFKLLSQAKGDG--VSPNLIMC 822
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 132/294 (44%), Gaps = 2/294 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+M +SG+ T+ L+D AG++ + ++ K +P+ V++ ++ +G
Sbjct: 527 QMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSG 586
Query: 232 MWKKATEVLEEIRERKISLDT-HI-YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
+A +VL E++ +D HI +++ G++ A +++ + K G+R
Sbjct: 587 AVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV 646
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+ + + GD+ A +++ DM+E+ + PD F +I G D +
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
S+G + Y+ L+ ++ A E + +KS + + + AL A +
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLP 766
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+A++ L ++ G++PN + +ML+ A + + + K GVSP+L+
Sbjct: 767 KAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 148/353 (41%), Gaps = 8/353 (2%)
Query: 118 LIEALGNVGRTSEADMLFKEMIYCG----LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM 173
++ L +T A + +K ++CG + N Y++ EM
Sbjct: 119 ILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEM 178
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
+ G T T+ +L+ AG D + K ++P Y+ I+ +
Sbjct: 179 IKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQY 238
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
K V E++ E + D YN ++ + G+ +L +M K+G P++ T+N L
Sbjct: 239 KLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNIL 298
Query: 294 IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN 353
+ ALNL + M+E G+ P F T+I L GK + K + G
Sbjct: 299 LHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGC 358
Query: 354 KKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQA 411
Y V++ + G+ + AEE + + +G L PN+F ++ + G ++A
Sbjct: 359 TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL--PNVFTYNSMIRGFCMAGKFKEA 416
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
+L+ ME G PN V+ + L+N NAG+ +EA V + E G L++
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 126/287 (43%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E + G ++ ++ LI C + G + + + ++ +SY ++ +L V
Sbjct: 177 EMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVK 236
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ D ++++M+ G P + YNI EMV G TY
Sbjct: 237 QYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYN 296
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
ILL + + + + +N M+ G +P ++ ++ G + ++E +
Sbjct: 297 ILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV 356
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ D Y +I + GEL +A ++F +M ++G PN+ T+NS+I+ C G + +A
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEA 416
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN 353
L +M+ +G P+ ++ T+++ L GK + + M +G+
Sbjct: 417 CALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%)
Query: 102 QMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXX 161
QM GF +Y ++ A +G+T L EM+ G P L YNI
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 162 XXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYS 221
M + G+ + L+D AG+LE ++E G P+ Y+
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 222 KIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE 281
++ Y G +KA E+ +E+ E+ + YNS+I F G+ EA L +M+
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESR 426
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
G PN V +++L+ G +A + DM E+G Y
Sbjct: 427 GCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHY 464
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 119/284 (41%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
F+ + Y ++ ++ + G +K +++E+ + +N +I T G+ G + +
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVV 207
Query: 273 KLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
+ F+K + RP ++N+++ Y ++ M E G PD + ++
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
GK D + + + M G Y +L+ K A + ++ GV
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
F L + ++ G E + G P++V ++I + + G +A ++
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKE 387
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ E G P++ TY ++++ F KF E + K ME+ GC P+
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 177/406 (43%), Gaps = 52/406 (12%)
Query: 91 GNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLY 150
G D AM L+ +ME G +++T +I L + G +A +F++M G+ P N
Sbjct: 296 GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP--NAV 353
Query: 151 NIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKM 210
I S ++ + S ++ + +
Sbjct: 354 TIMSAVSA----------------------------------CSCLKVINQGSEVHSIAV 379
Query: 211 K-GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELG 269
K GF + V + +V +Y G + A +V + ++ + D + +NS+I + + G G
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCG 435
Query: 270 EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG-LYPDPKIFVTI 328
+A +LF +MQ +RPNI+TWN++I + + GD +A++LF M++ G + + + I
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 329 ISCLGEQGKWDTIKKCFESMT-SRGNKKYGAVYAVLVDIFGQYGK--FQNAEECVQALKS 385
I+ + GK D + F M SR + ++L G + CV
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 386 EGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYME 445
+ + N AL + YA+ G E + + ME + +I+ N LI + G Y
Sbjct: 556 DAIHAVKN---ALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGP 608
Query: 446 AMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
A+++++ +K G++P+ T ++++ A DE ++ + D
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAND 654
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 171/393 (43%), Gaps = 25/393 (6%)
Query: 113 YSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXE 172
++++ +I A R E LF+ M+ G+ P L+
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
++ G+ +L + G L+ M+ + + ++ ++ Y NG
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGK 262
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
++A E+++E+ + IS +N +I + + G+ A+ L KM+ G+ ++ TW +
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTII---SCL-----GEQGKWDTIKKC 344
+I G +AL++F M G+ P+ ++ + SCL G + +K
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ 404
F GN LVD++ + GK ++A + ++K++ V + ++ Y Q
Sbjct: 383 FIDDVLVGNS--------LVDMYSKCGKLEDARKVFDSVKNKDVYT----WNSMITGYCQ 430
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG-VSPDLV 463
G C +A ++ M+ + PNI+ N +I+ + G EAM ++ +++ G V +
Sbjct: 431 AGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTA 490
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
T+ ++ +I+ K DE ++++M+ P+
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 139/312 (44%), Gaps = 17/312 (5%)
Query: 189 LDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKI 248
DY G L + ++ + +G + Y K++ D+G + L I +
Sbjct: 53 FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSG-----SIHLGRILHARF 107
Query: 249 SL----DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
L D + ++ + K G + +A K+F M++ N+ TW+++I + RE +
Sbjct: 108 GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWR 163
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
+ LF M + G+ PD +F I+ G + K + G V ++
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL 223
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
++ + G+ A + + ++ V+ ++ A Y Q G E+A+++++ ME EGI
Sbjct: 224 AVYAKCGELDFATKFFRRMRERDVIAWNSVLLA----YCQNGKHEEAVELVKEMEKEGIS 279
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
P +V N+LI ++ G+ AM + ++ G++ D+ T+T ++ I + +
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 485 YKRMETDGCTPD 496
+++M G P+
Sbjct: 340 FRKMFLAGVVPN 351
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 1/301 (0%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
GI T +L+ +E + ++E+ G PN Y+ I+G Y G + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
VLEE+ +R D Y ++D + K G EA + M+K + PN VT+ +I+
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
C+E +A N+F +M E+ PD + +I L E K D + M
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
A+ + L+ + G+ A + + +G + S + L ++G +A ++
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M +PN N+LI S G E + V + E G P+ T+ L + +
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
Query: 477 K 477
K
Sbjct: 485 K 485
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 136/320 (42%), Gaps = 3/320 (0%)
Query: 104 EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXX 163
E+ G + ++ L++AL A + E+ GL P L Y
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 164 XXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKI 223
EM+D G + TY +L+D + GR + + +++M+ +PN Y +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 224 VGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
+ +A + +E+ ER D+ + +ID + ++ EA L+ KM K
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
P+ ++LI W C+EG T+A LF + E+G P + T+I+ + E+G+ +
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
++ M R K Y VL++ + G + ++ + G + F L
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Query: 404 QQGLCEQAIKV--LQIMEGE 421
+ G E A+K+ + +M G+
Sbjct: 482 KLGKEEDAMKIVSMAVMNGK 501
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 160/376 (42%), Gaps = 13/376 (3%)
Query: 12 ISLSRNHGGALRCSSHATAIQFSKIPN-----SLNSSNLWIRNKVVNSESDTKTTLFPNP 66
I L RN+G A R S F +IP+ S+ S N + + N D +F N
Sbjct: 124 IDLLRNYGLAGRYESSMRI--FLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 67 EAPRPGEELSSEFYS--QLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGN 124
+ ++ ++ L+ CK+ +++ A +L ++ ++G + +YT ++
Sbjct: 182 ---KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA 238
Query: 125 VGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRET 184
G A + +EM+ G P Y + +M + I T
Sbjct: 239 RGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 298
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y +++ + + + +EM + F P+S + K++ ++ +A + ++
Sbjct: 299 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 358
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
+ D + +++I K G + EA KLF + +K G P+++T+N+LI C +G+ T
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELT 417
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
+A L+ DM E+ P+ + +I L + G + E M G + +L
Sbjct: 418 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILF 477
Query: 365 DIFGQYGKFQNAEECV 380
+ + GK ++A + V
Sbjct: 478 EGLQKLGKEEDAMKIV 493
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 35/215 (16%)
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI 341
G+ PNI T N L+K C++ D A + ++ GL P+ + TI+ +G ++
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 342 KKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANA 401
K+ E M RG Y VL+D + + G+F
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS--------------------------- 278
Query: 402 YAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPD 461
+A V+ ME IEPN V ++I A + EA +++ + E PD
Sbjct: 279 --------EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPD 330
Query: 462 LVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
++ A K DE ++++M + C PD
Sbjct: 331 SSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE-SMTSR 351
L++ + G Y ++ +F + + G+ + T+++ L + ++D + F+ S S
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G +LV + ++A + + + S G++ + + + Y +G E A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+VL+ M G P+ +L++ + GR+ EA +V ++++ + P+ VTY +++A
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ KK E ++ M PD + DAL
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 341
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 9/161 (5%)
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
++ L+ +G G+++++ + GV S L N Q Q ++ M
Sbjct: 122 LFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN----QRFDLVHAM 177
Query: 419 -----EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
E GI PNI N+L+ A A V I G+ P+LVTYTT++ ++
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 474 RTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERRS 514
+ + + M G PD +L D L R S
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 194/445 (43%), Gaps = 22/445 (4%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLA-QMEALGFQLSSYSYTHLIEALGNVGRTSE 130
G + S + ++ ++ KE ++D A +M A G Y+Y L++ L R +
Sbjct: 142 GIKPSLKVFNSILDVLVKE-DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
L + M G+ P +YN EM + T+ IL+
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFNILIS 256
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
+ + +L + + + GF P+ +K++ + + G +A EVLE + + +
Sbjct: 257 AYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV 316
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D N+++ + G++ A + F++M+++G PN+ T+N LI +C G AL+ F
Sbjct: 317 DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTF 376
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA---VYAVLVDIF 367
+DM+ + + F T+I L G+ D K E M + +GA Y ++ F
Sbjct: 377 NDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE-MMQDSDTVHGARIDPYNCVIYGF 435
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA-----IKVLQIMEGEG 422
+ ++++A E + LK E + P A+ ++ LCE+ M GEG
Sbjct: 436 YKENRWEDALEFL--LKMEKLF--PR---AVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVP 482
P+I++ + LI+ +S G+ E++ + + + G P T+ ++ F + K
Sbjct: 489 GVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGI 548
Query: 483 IIYKRMETDGCTPDRKAKQMLQDAL 507
+ M GC PD ++ L + L
Sbjct: 549 KFVEDMAERGCVPDTESYNPLLEEL 573
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 161/396 (40%), Gaps = 47/396 (11%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LIS C E L ++M LL + +LGF + T ++E L N GR SEA + + +
Sbjct: 251 FNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G K VD T L+ + + G++
Sbjct: 311 SKGGK-----------------------------VDVVACNT------LVKGYCALGKMR 335
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
EM+ KG+ PN Y+ ++ Y D GM A + +++ I + +N++I
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 260 DTFGKYGELGEALKLFVKMQK----EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
G + LK+ MQ G R I +N +I +E + AL M++
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGAR--IDPYNCVIYGFYKENRWEDALEFLLKMEK 453
Query: 316 QGLYPDP--KIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
L+P + F I C E+G D +K ++ M G V L+ + Q+GK
Sbjct: 454 --LFPRAVDRSFKLISLC--EKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+ + E + + + G L + F A+ + +Q IK ++ M G P+ N L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+ G +A ++ + E + PD +++LM
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 129/332 (38%), Gaps = 40/332 (12%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK-GFQPNSFVYSKIVGLYRDNGMWKK 235
G +R TY L R + + ++EM G P+ ++ I+ + + K+
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGK-------------------------YG---- 266
V++ + + I ++NSI+D K YG
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 267 ------ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+G+ KL M+ GV PN V +N+L+ C+ G +A +L S+M+E P
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----P 246
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ F +IS + K E S G ++++ G+ A E +
Sbjct: 247 NDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVL 306
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+ ++S+G V L Y G A + ME +G PN+ N+LI + +
Sbjct: 307 ERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDV 366
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
G A+ ++ +K + + T+ TL++
Sbjct: 367 GMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 4/271 (1%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G + E Y+ LI+ C G LD A+ M+ + + ++ LI L G
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Query: 127 RTSEADMLFKEMIYCGL--KPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRET 184
RT + + + M R++ YN +M +
Sbjct: 403 RTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRS 462
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
++++ G ++D + ++M +G P+ V ++ Y +G +++ E++ ++
Sbjct: 463 FKLI--SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
R + +N++I F K ++ +K M + G P+ ++N L++ C +GD
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
KA LFS M E+ + PDP ++ +++ CL ++
Sbjct: 581 KAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 10/256 (3%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D I+ +II FG+ + + + + K G++P++ +NS++ +E D A F
Sbjct: 111 DDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIAREFF 169
Query: 311 S-DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
+ M G++ D + ++ L + K + M + G VY L+ +
Sbjct: 170 TRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK 229
Query: 370 YGKFQNAEECVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
GK A + +K PN F L +AY + Q++ +L+ G P++
Sbjct: 230 NGKVGRARSLMSEMK------EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDV 283
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
V + ++ N GR EA+ V ++ G D+V TL+K + K +
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIE 343
Query: 488 METDGCTPDRKAKQML 503
ME G P+ + +L
Sbjct: 344 MERKGYLPNVETYNLL 359
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 105/230 (45%), Gaps = 6/230 (2%)
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI 341
G+ P+ + ++I+ R + +++ + + G+ P K+F +I+ L ++ D
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE-DIDIA 165
Query: 342 KKCF-ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALAN 400
++ F M + G Y +L+ + + + +Q +K+ GV + ++ L +
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 401 AYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSP 460
A + G +A ++ M+ EPN V N+LI+A+ N + +++M + G P
Sbjct: 226 ALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
Query: 461 DLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTAL 510
D+VT T +M+ + E + +R+E+ G D A L AL
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAL 331
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 199/449 (44%), Gaps = 59/449 (13%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E + G +L S F++ +I+ + GN++ A+ L +M+ LG ++ +Y LI+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ + L M+ G VD G T+
Sbjct: 165 KPERSSELLDLMLEEG------------------------------NVDVG--PNIRTFN 192
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA-TEVLEE-IR 244
+L+ + ++E+ W + +M+ G +P++ Y+ I Y G +A +EV+E+ +
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHC----RE 300
+ K + ++ + + G + + L+ +M++ V N+V +NSLI R+
Sbjct: 253 KEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Query: 301 G--DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE-QGKWDTIKKCFESMTSRGNKKYG 357
G + T L L S +E L + K+ V +++ + E K D I
Sbjct: 313 GIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVI---------------- 356
Query: 358 AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQI 417
Y+ +++ + G + A + + + GV + + LA Y + ++A ++L+
Sbjct: 357 -TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 418 MEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
+ E PN+V+ +I+ + + G +AM V++ + + GVSP++ T+ TLM ++ K+
Sbjct: 416 LIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQ 474
Query: 478 FDEVPIIYKRMETDGCTPDRKAKQMLQDA 506
+ + + M G P+ +L +A
Sbjct: 475 PWKAEEVLQMMRGCGVKPENSTFLLLAEA 503
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 175/396 (44%), Gaps = 69/396 (17%)
Query: 114 SYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM 173
S T L+ L GR EA +FK + G +P L
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLI------------------------- 81
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
+Y LL + S ++E++ G + +S ++ ++ + ++G
Sbjct: 82 ----------SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNM 131
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG---VRPNIVTW 290
+ A + L +++E ++ T YN++I +G G+ + +L M +EG V PNI T+
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIK---KCFES 347
N L++ C++ +A + M+E G+ PD + TI +C ++G +T++ + E
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG--ETVRAESEVVEK 249
Query: 348 MTSRGNKK-YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ-- 404
M + K G ++V + + G+ ++ V+ +K V + +F +L N + +
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 405 --QGLCE---------------------QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAG 441
G+ E ++VL +M+ ++ +++ + ++NA+S+AG
Sbjct: 310 DRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAG 369
Query: 442 RYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
+A V+ + ++GV PD Y+ L K ++R K+
Sbjct: 370 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 154/364 (42%), Gaps = 38/364 (10%)
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
V+ RT + L++ + GR + + + G +P+ Y+ ++ +
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQY 96
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
+ ++ E+ + LD+ +N++I+ F + G + +A++ +KM++ G+ P T+N+L
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 294 IKWHCREGDYTKALNLFSDMQEQG---LYPDPKIFVTIISCLGEQGK----WDTIKKCFE 346
IK + G ++ L M E+G + P+ + F ++ ++ K W+ +KK
Sbjct: 157 IKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKK--- 213
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE-ECVQALKSEGVLVSPNIFCAL-ANAYAQ 404
M G + Y + + Q G+ AE E V+ + + C + Y +
Sbjct: 214 -MEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN------------------------- 439
+G ++ ++ M+ +E N+V+ N LIN F
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVEL 332
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
G + V +KE V D++TY+T+M A+ ++ ++K M G PD A
Sbjct: 333 VGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 392
Query: 500 KQML 503
+L
Sbjct: 393 YSIL 396
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 149/330 (45%), Gaps = 7/330 (2%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEV 239
+++ Y +L V +L + M+ G P + ++ L R++G ++
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKI 179
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
E+ +R D++ Y ++I ++G + EA KLF +M ++ P +VT+ SLI C
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
+ +A+ +M+ +G+ P+ + +++ L + G+ + FE M +RG +
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
Y L+ + K Q A E + + +G+ ++ + + + +A L M
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYM------EAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
GI PN + N+ + + R + A ++Y ++ G+S ++ T +L+K
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 474 RTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
+ +F + + + TDGC P + ++L
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
+K A +++ ++ + I SI +G+ ++L++F KM+ P+ + +
Sbjct: 67 FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE-QGKWDTIKKCFESMTSR 351
++ E A + +M+E GL P +I L G D K F M R
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G Y L+ ++G+ A++ + + + + +L N ++A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
++ L+ M+ +GIEPN+ + L++ GR ++AM ++ + G P++VTYTTL+
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPD 496
+ +K E + RM G PD
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPD 331
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 129/320 (40%), Gaps = 50/320 (15%)
Query: 83 LISKCCK-EGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYC 141
LI C+ +G +D + + +M G SY+Y LI L GR EA LF EM+
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 142 GLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDT 201
P T TY L++ + +++
Sbjct: 222 DCAP-----------------------------------TVVTYTSLINGLCGSKNVDEA 246
Query: 202 WSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+ EMK KG +PN F YS ++ GL +D G +A E+ E + R + Y ++I
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKD-GRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
K ++ EA++L +M +G++P+ + +I C + +A N +M G+ P
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Query: 321 DPKIFVTIIS---------CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
+ + + C + T+ + SM SRG LV + G
Sbjct: 366 NRLTWNIHVKTSNEVVRGLCANYPSRAFTL---YLSMRSRGISVEVETLESLVKCLCKKG 422
Query: 372 KFQNAEECVQALKSEGVLVS 391
+FQ A + V + ++G + S
Sbjct: 423 EFQKAVQLVDEIVTDGCIPS 442
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 123/292 (42%), Gaps = 9/292 (3%)
Query: 36 IPNSLNSSNLWIRNKVVNSES-DTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLD 94
+P ++ S N+ I+ N + D +F E P+ G + S Y LIS C+ G +D
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFL--EMPKRGCDPDSYTYGTLISGLCRFGRID 209
Query: 95 RAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXX 154
A L +M + +YT LI L EA +EM G++P + Y+
Sbjct: 210 EAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM 269
Query: 155 XXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQ 214
M+ G TY L+ ++++ ++ M ++G +
Sbjct: 270 DGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEE-----IRERKISLDTHIYNSIIDTFGKYGEL- 268
P++ +Y K++ + +++A L+E I +++ + H+ S G
Sbjct: 330 PDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP 389
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
A L++ M+ G+ + T SL+K C++G++ KA+ L ++ G P
Sbjct: 390 SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIP 441
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI+ C N+D AM L +M++ G + + ++Y+ L++ L GR+ +A LF+ M+
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G +P + Y M G+ Y ++ F + +
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRD--NGMW----KKATEVLEEIRERKISLDTH 253
+ + ++EM + G PN ++ V + G+ +A + +R R IS++
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVE 409
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
S++ K GE +A++L ++ +G P+ TW LI
Sbjct: 410 TLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 151/328 (46%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+M+ GI T L++ F + ++D +M+ G + + V + ++ N
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ A EVL+ +++R IS + Y+S+I K G L +A + +M + + PN++T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI + + G +K +++ M + + P+ + ++I L + D K + M S+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G Y+ L + F + + + + + + GV + L Y Q G + A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+ V M G+ PNI N+++ G +A+S + H++++ D++TYT ++
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPDRKA 499
+ E ++ +++ PD KA
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKA 330
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 6/307 (1%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+M GI R IL+D + + MK +G PN YS ++ +G
Sbjct: 38 QMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSG 97
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
A L E+ +KI+ + ++++ID + K G+L + ++ M + + PN+ T++
Sbjct: 98 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYS 157
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
SLI C +A+ + M +G P+ + T+ + + + D K + M R
Sbjct: 158 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF---CALANAYAQQGLC 408
G L+ + Q GK A + S G++ PNI LA +A G
Sbjct: 218 GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLI--PNIRSYNIVLAGLFA-NGEV 274
Query: 409 EQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
E+A+ + M+ + +I+ ++I+ A EA +++ +K V PD YT +
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 469 MKAFIRT 475
+ R
Sbjct: 335 IAELNRA 341
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
I D +S+++ F + +A+ + +M+K G++ ++V LI C+ AL
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+ M+++G+ P+ + ++I+ L + G+ ++ M S+ ++ L+D +
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC-----EQAIKVLQIMEGEG 422
+ GK + + + + PN+F + Y GLC ++AIK+L +M +G
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSI--DPNVFTYSSLIY---GLCMHNRVDEAIKMLDLMISKG 183
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVP 482
PN+V + L N F + R + + + + + GV+ + V+ TL+K + + K D
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 483 IIYKRMETDGCTPDRKAKQMLQDALTA 509
++ M ++G P+ ++ ++ L A
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFA 270
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
+KM K G+ P+IVT +SL+ C A+ + M++ G+ D + +I L +
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
+ + M RG Y+ L+ + G+ +AE + + S+ ++PN+
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK--INPNV 118
Query: 395 --FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
F AL +AYA++G + V ++M I+PN+ + LI R EA+ +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+ G +P++VTY+TL F ++ + D+
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDD 206
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS LI+ CK G L A L +M++ + +++ LI+A G+ S+ D ++K MI
Sbjct: 86 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 145
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P + Y+ M+ G TY L + F + R++
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D +++M +G N+ + ++ Y G A V + + + YN ++
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 265
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
GE+ +AL F MQK +I+T+ +I C+ +A +LF ++ + +
Sbjct: 266 AGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVE 325
Query: 320 PDPKIFVTIISCLGEQG 336
PD K + +I+ L G
Sbjct: 326 PDFKAYTIMIAELNRAG 342
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 177/460 (38%), Gaps = 28/460 (6%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E + Y LI CCK +D AM + +M+ GF + Y L++ + +EA
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
LF++M+ G++ YNI ++ G + T+ I+
Sbjct: 379 CQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQ 438
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
G+LE + EM+ +GF + S ++ + G W ++++ IRE + +
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Query: 252 THIYNSIIDT---------------FGKYGELGEALKLFVKMQKEGVRPNIVT------W 290
+N+ ++ F G + + + V + +G V+ W
Sbjct: 499 VLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSM-VGSEDDGASAEEVSPMEDDPW 557
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV-----TIISCLGEQGKWDTIKKCF 345
+S + LF + Q + P F T +S +G K F
Sbjct: 558 SSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLF 617
Query: 346 ESMTSRGNKKYGA-VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ 404
E G + Y ++ F + G FQ A + + + + +
Sbjct: 618 EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGK 677
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
G + A VL + +G +IVM N LINA A R EA ++ H+K +G++PD+V+
Sbjct: 678 MGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVS 737
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQ 504
Y T+++ + K E K M GC P+ +L
Sbjct: 738 YNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILD 777
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 184/458 (40%), Gaps = 56/458 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI C G A+ + +++ G + + +Y LI+ R +A ++ EM
Sbjct: 292 YNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQ 351
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
Y G P +YN +MV G+ + TY IL+D GR E
Sbjct: 352 YNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAE 411
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYR-DNGMWKKATEVLEEIRERKISLDTHIYNSI 258
++ ++K KG ++ +S IVGL G + A +++EE+ R S+D +S+
Sbjct: 412 AGFTLFCDLKKKGQFVDAITFS-IVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSL 470
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN-----SLIKWHCREGDYTKALNLFSDM 313
+ F K G KL +++ + PN++ WN SL + ++ DYT
Sbjct: 471 LIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTP-------- 522
Query: 314 QEQGLYPDPKIFVTIISCLG--------------EQGKWDT-------------IKKCFE 346
++P F+ I+S +G E W + K F
Sbjct: 523 ----MFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFG 578
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQY-------GKFQNAEECVQALKSEGVL-VSPNIFCAL 398
+RG + + VD+ + G A + + GV ++ + ++
Sbjct: 579 --LARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSM 636
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
+++ ++G + A VL M +I N++I GR A +V + + G
Sbjct: 637 MSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGG 696
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
D+V Y TL+ A + + DE ++ M+++G PD
Sbjct: 697 YLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPD 734
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 183/440 (41%), Gaps = 25/440 (5%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
RPG + S+ YSQ+ C+ G L LL M+ G L L+++L G+
Sbjct: 85 RPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFE 144
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV---------DSG--I 178
A + M G ++Y+ +++ D+G I
Sbjct: 145 SALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVI 204
Query: 179 WRTRETYEILLDYFVSAGRLEDTWSTINEM--KMKG---FQPNSFVYSKIVGLYRDNGMW 233
+ + ++ + R D S + K+KG F+ +++ Y+ + + G
Sbjct: 205 IVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDL 264
Query: 234 KKATEVLEEIRERK------ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNI 287
A + +E++ER D YNS+I +G+ +AL ++ +++ G P+
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES 347
T+ LI+ C+ A+ ++ +MQ G PD ++ ++ + K + FE
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGL 407
M G + Y +L+D + G+ + LK +G V F + ++G
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 408 CEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTT 467
E A+K+++ ME G ++V ++ L+ F GR+ + HI+E + P+++ +
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Query: 468 LMKAFIR---TKKFDEVPII 484
++A ++ +K D P+
Sbjct: 505 GVEASLKRPQSKDKDYTPMF 524
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
T TY ++ FV G + +++M + Y+ I+ G A+ VL
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ + ++ LD +YN++I+ GK L EA +LF M+ G+ P++V++N++I+ + +
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
G +A M + G P+ + TI+ LG++ + KK
Sbjct: 749 GKLKEAYKYLKAMLDAGCLPN-HVTDTILDYLGKEMEKARFKK 790
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 131/318 (41%), Gaps = 22/318 (6%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
G++ ++ YS+I G+ + ++L ++E ++LD + ++D+ + G+ A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN-LFSDMQEQGLYPDPKIFVTIIS 330
L + M++ G N ++S++ ++ + AL+ LF ++ + D II
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 331 C--------------LGEQGKWDTIKKCFESMTSRGNKKYGA-VYAVLVDIFGQYGKFQN 375
L K+ FE + K+ Y + + FG +G
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 376 AEECVQALKSE----GVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
A + +K G P+I + +L + G + A+ V ++ G EP+
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+LI + R +AM +Y ++ +G PD + Y L+ ++ +K E ++++M
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 490 TDGCTPDRKAKQMLQDAL 507
+G +L D L
Sbjct: 387 QEGVRASCWTYNILIDGL 404
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 174/401 (43%), Gaps = 9/401 (2%)
Query: 71 PGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSE 130
PG +S++ + ++ CK NL+RA +LL LG +Y LI+ E
Sbjct: 9 PG--ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDE 66
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
A + + M G++P + YN EM+ SG+ +Y L+
Sbjct: 67 AYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
Query: 191 YFVSAGRLEDTWSTINE-MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
+ GR + + ++E + + G P Y+ ++ +G A E+ + ++ R +
Sbjct: 127 CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VK 185
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
+ YN +I+ K +G + +++K G PN VT+ +++K + + K L L
Sbjct: 186 PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQL 245
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV-YAVLVDIFG 368
F M+++G D ++S L + G+ + +C + G + V Y L++++
Sbjct: 246 FLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYF 305
Query: 369 QYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
+ G ++ ++ ++ +G+ + N G A K L + G++P++V
Sbjct: 306 KDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVV 365
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
N LI+ AG AM ++ ++ D TYT+++
Sbjct: 366 TCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVV 402
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 132/264 (50%), Gaps = 2/264 (0%)
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
+ T + N +++ K+ L A L + + GV P+++T+N+LIK + R +A +
Sbjct: 11 ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAV 70
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
M+E G+ PD + ++IS + + + + F+ M G Y L+ + +
Sbjct: 71 TRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Query: 370 YGKFQNAEECV-QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
G+ A + + + + G++ + + L +A + G + AI++ + ++ ++P ++
Sbjct: 131 LGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELM 189
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
N+LIN + R + +K+SG +P+ VTYTT++K + +TK+ ++ ++ +M
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 489 ETDGCTPDRKAKQMLQDALTALER 512
+ +G T D A + AL R
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGR 273
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 131/298 (43%), Gaps = 3/298 (1%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
G P+ Y+ ++ Y +A V +RE I D YNS+I K L
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN-LFSDMQEQGLYPDPKIFVTIIS 330
L+LF +M G+ P++ ++N+L+ + + G + +A L D+ GL P + ++
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
L + G D + F+ + SR + Y +L++ + + + + ++ LK G
Sbjct: 163 ALCKSGHTDNAIELFKHLKSRVKPEL-MTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 391 SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
+ + + Y + E+ +++ M+ EG + +++A GR EA
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECM 281
Query: 451 HHIKESGV-SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
H + SG S D+V+Y TL+ + + D V + + +E G PD ++ + L
Sbjct: 282 HELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 6/276 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ CK G+ D A+ L +++ + +Y LI L R D + +E+
Sbjct: 157 YNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P Y +M G ++ + GR E
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 200 DTWSTINEMKMKGFQPNSFV-YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ + ++E+ G + V Y+ ++ LY +G ++LEEI + + D + + I
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
++ G G A K + + G++P++VT N LI C+ G +A+ LF+ M+ +
Sbjct: 336 VNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR-- 393
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
D + +++ L + G+ K S ++G K
Sbjct: 394 --DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMK 427
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 139/320 (43%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
MV SG TY +++ G + + +M + G P+ Y+ ++ D G
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
++A ++ + Y +++ +Y A+++ M EG P+IVT+NS
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
L+ ++CR G+ + ++ + GL + + T++ L WD +++ M
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
Y +L++ + A + + + L + + A +++G+ + AI
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
++L +++ P ++ N +I+ + G +A+ +YH + ++G+ PD +T +L+ F
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 473 IRTKKFDEVPIIYKRMETDG 492
R +E + K G
Sbjct: 465 CRANLVEEAGQVLKETSNRG 484
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 130/307 (42%)
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
+L+ + M M G P++ Y+ I+G G + A +LE++ D YN
Sbjct: 154 QLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYN 213
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
++I YG +A++ + + G P ++T+ L++ CR +A+ + DM +
Sbjct: 214 TVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVE 273
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
G YPD + ++++ +G + + + + S G + Y L+ + +
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
EE + + + + L N + L +AI M + P+IV N ++ A
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
S G +A+ + +K + P L+TY +++ + + +Y +M G PD
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 497 RKAKQML 503
++ L
Sbjct: 454 DITRRSL 460
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 149/368 (40%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I CK+G++ A+ LL M G +Y +I + + G +A +K+ +
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQL 236
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + Y + +M G + TY L++Y G LE
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE 296
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ S I + G + N+ Y+ ++ + W + E+L + + YN +I
Sbjct: 297 EVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILI 356
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ K L A+ F +M ++ P+IVT+N+++ +EG A+ L ++
Sbjct: 357 NGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCP 416
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P + ++I L ++G + + M G L+ F + + A +
Sbjct: 417 PGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQV 476
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
++ + G + + + + ++ E AI+V++IM G +P+ + ++
Sbjct: 477 LKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEE 536
Query: 440 AGRYMEAM 447
G EA+
Sbjct: 537 MGMGSEAV 544
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 108/241 (44%)
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
++++ + +L +A+ + M G P+ +T+N +I C++G AL L DM
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
G PD + T+I C+ + G + + ++ G + Y VLV++ +Y
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
A E ++ + EG + +L N ++G E+ V+Q + G+E N V N L++
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 436 AFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
+ + + E + + + ++ P ++TY L+ + + + +M C P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 496 D 496
D
Sbjct: 383 D 383
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 153/336 (45%), Gaps = 3/336 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
M+ G + RE + +L G + + + + M G + V+S +V + +G
Sbjct: 202 RMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSG 261
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+KA ++ ++ + S + Y S+I F G + EA + K+Q EG+ P+IV N
Sbjct: 262 EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+I + R G + +A +F+ ++++ L PD F +I+S L GK+D + + + +
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTD 381
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
+ G +L + F + G A + + + + + + +A + G A
Sbjct: 382 FDLVTG---NLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
IK+ +I+ E + + +I++ G+Y A+ ++ D+V+YT +K
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+R K+ +E + M+ G P+R+ + + L
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGL 534
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 38/357 (10%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G +S +S L+S + G +A+ L +M +G + +YT LI+ ++G EA
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ ++ GL P + L N+ + + + T+ +L
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 192 FVSAGR----------------------LEDTWSTINE----------MKMKGFQPNSFV 219
+G+ L + +S I M K F + +
Sbjct: 362 LCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYT 421
Query: 220 YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ 279
Y+ + G + A ++ + I + K LD H +++IID+ + G+ A+ LF +
Sbjct: 422 YTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCI 481
Query: 280 KEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWD 339
E ++V++ IK R +A +L DM+E G+YP+ + + TIIS L ++ + +
Sbjct: 482 LEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETE 541
Query: 340 TIKKCFESMTSRG-----NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
++K G N K+ VY++L G + +F++ E ++ +E V VS
Sbjct: 542 KVRKILRECIQEGVELDPNTKF-QVYSLLSRYRGDFSEFRSVFEKWKSEFTENVDVS 597
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 163/421 (38%), Gaps = 42/421 (9%)
Query: 90 EGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNL 149
G+L +L +M GF + + ++ G SEA + MI G+ +N+
Sbjct: 190 RGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNV 249
Query: 150 YNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMK 209
++ M+ SG +R+ G + N+M
Sbjct: 250 WS---------------------MLVSGFFRS--------------GEPQKAVDLFNKMI 274
Query: 210 MKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELG 269
G PN Y+ ++ + D GM +A VL +++ ++ D + N +I T+ + G
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 270 EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV--T 327
EA K+F ++K + P+ T+ S++ C G + + G+ D +
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI-----THGIGTDFDLVTGNL 389
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+ +C + G K M+ + Y V + + G + A + + + E
Sbjct: 390 LSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEK 449
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
+ + A+ ++ + G A+ + + E ++V + I A R EA
Sbjct: 450 KHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAY 509
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
S+ +KE G+ P+ TY T++ + K+ ++V I + +G D K + L
Sbjct: 510 SLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLL 569
Query: 508 T 508
+
Sbjct: 570 S 570
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 283 VRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIK 342
++P + I W R Y KA+ +++ M G P+ + ++ + +
Sbjct: 106 IKPRVFLLLLEIFW--RGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGAL 163
Query: 343 KCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAY 402
+ FE + R + + G+ G + ++ + EG + F +
Sbjct: 164 EIFEGIRFRNFFSFDIALSHFCSRGGR-GDLVGVKIVLKRMIGEGFYPNRERFGQILRLC 222
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
+ G +A +V+ +M GI ++ + +ML++ F +G +A+ +++ + + G SP+L
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
VTYT+L+K F+ DE + +++++G PD ++ T L R
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 141/314 (44%), Gaps = 2/314 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+S +IS ++ A S ++ F+ YT+L+ G SEA+ +FKEM
Sbjct: 224 FSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++P + Y+I +M+DSG T+ L+ V AGR E
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
N+MK G +P++ Y+ ++ + + + A +VL + ++K ++ +N+I
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIF 402
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
K ++ A +++ KM + PN VT+N L++ L + +M ++ +
Sbjct: 403 RYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVE 462
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMT-SRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P+ + +++ G W+ K F+ M + ++Y +++ + G+ + EE
Sbjct: 463 PNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEE 522
Query: 379 CVQALKSEGVLVSP 392
V+ + +G++ P
Sbjct: 523 LVEKMIQKGLVARP 536
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 145/322 (45%), Gaps = 2/322 (0%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
ET+ IL+ +V AG + N M+ G P+ +S ++ +A +
Sbjct: 187 ETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS 246
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+++R D +Y +++ + + GE+ EA K+F +M+ G+ PN+ T++ +I CR G
Sbjct: 247 LKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ 305
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
++A ++F+DM + G P+ F ++ + G+ + + + + M G + Y
Sbjct: 306 ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNF 365
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
L++ + +NA + + + + V+ + F + ++ A ++ M
Sbjct: 366 LIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVP 482
EPN V N+L+ F + + + + + V P++ TY L+ F ++
Sbjct: 426 CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAY 485
Query: 483 IIYKRMETDGC-TPDRKAKQML 503
++K M + C TP +M+
Sbjct: 486 KLFKEMVEEKCLTPSLSLYEMV 507
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 5/243 (2%)
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
H YN +ID GK + A L M+ V +I T+ LI+ + R G ++A++ F+
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
M++ G PD F +IS L + + + F+S+ R VY LV + + G+
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDV-IVYTNLVRGWCRAGE 270
Query: 373 FQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
AE+ + +K G + PN++ + +A + G +A V M G PN +
Sbjct: 271 ISEAEKVFKEMKLAG--IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
N L+ AGR + + VY+ +K+ G PD +TY L++A R + + + M
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 491 DGC 493
C
Sbjct: 389 KKC 391
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 131/324 (40%), Gaps = 1/324 (0%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
++ Y ++D + + W I+ MK + + + ++ ++ Y G+ +A
Sbjct: 149 KSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHC 208
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ + D ++ +I + EA F + K+ P+++ + +L++ CR
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCR 267
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
G+ ++A +F +M+ G+ P+ + +I L G+ F M G
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
+ L+ + + G+ + + +K G + L A+ + E A+KVL M
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI 387
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
+ E N N + A +Y + E+ P+ VTY LM+ F+ +K D
Sbjct: 388 KKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTD 447
Query: 480 EVPIIYKRMETDGCTPDRKAKQML 503
V + K M+ P+ ++L
Sbjct: 448 MVLKMKKEMDDKEVEPNVNTYRLL 471
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 345 FESMTSRGN--KKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAY 402
F TSR + K Y ++D+ G+ +F A + +KS V +S F L Y
Sbjct: 137 FNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRY 196
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
+ GL +A+ ME G P+ + +++I+ S R EA S + +K+ PD+
Sbjct: 197 VRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDV 255
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ YT L++ + R + E ++K M+ G P+ ++ DAL
Sbjct: 256 IVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 163/386 (42%), Gaps = 7/386 (1%)
Query: 39 SLNSSNLWIRNKVV------NSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGN 92
SLNS L + ++ V S S + F N P +S Y +L
Sbjct: 67 SLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKK 126
Query: 93 LDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI-YCGLKPRLNLYN 151
+ +L QM+ L +S + +IE G G +A LF + G + +++YN
Sbjct: 127 YESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYN 186
Query: 152 IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK 211
M+ G+ + TY IL++ + SAG++++ ++EM +
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
GF P + ++ + G + A E++ ++ + D +N +I+ K GE+
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
++++ K G+ +I T+ +LI + G +A L ++ E G P P ++ II
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG 366
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
+ G +D F M + + VY +L+ + G+ GKF +A + + G++
Sbjct: 367 MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPI 426
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQI 417
F + + G + A+++ Q+
Sbjct: 427 SRCFDMVTDGLKNGGKHDLAMRIEQL 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 1/292 (0%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
+ P S Y ++ + ++ ++L+++++ + + II+ +GK G + +A+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 273 KLFVKMQKE-GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+LF + K G + + +NSL+ C + A L M +GL PD + + +++
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
GK ++ + M+ RG +L++ G ++A+E V + G +
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH 451
F L A ++ G E I++ G+ +I LI A S G+ EA + +
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
Query: 452 HIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
+ E G P Y ++K R FD+ + M+ P+R ML
Sbjct: 347 NCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTML 398
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 1/326 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
E++DSG + T LL+ + +ED W + M G PN++ ++ + ++ ++
Sbjct: 191 EVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDS 250
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+++ + LE++ E D YN+++ ++ + G L EA L+ M + V P++VT+
Sbjct: 251 NFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYT 310
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
SLIK C++G +A F M ++G+ PD + T+I ++G KK M
Sbjct: 311 SLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGN 370
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
V+V+ F + G+ +A V L+ V + + L + Q+G A
Sbjct: 371 SVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAA 430
Query: 412 IKVL-QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
+L +I+E EG E N LI + S EA+ + +K D TY L+
Sbjct: 431 KHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIG 490
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPD 496
R + E + M PD
Sbjct: 491 CLCRIGRNREAESLMAEMFDSEVKPD 516
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 146/372 (39%), Gaps = 11/372 (2%)
Query: 88 CKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRL 147
C + N L +ME GF+ +Y L+ + GR EA L+K M + P L
Sbjct: 247 CNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDL 306
Query: 148 NLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINE 207
Y MVD GI +Y L+ + G ++ + ++E
Sbjct: 307 VTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHE 366
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
M P+ F IV + G A + E+R K+ + + + +I + + G+
Sbjct: 367 MLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGK 426
Query: 268 LGEALKLFVK-MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
A L + +++EG T+N+LI+ R +AL L ++ Q D K +
Sbjct: 427 PFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYR 486
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
+I CL G+ + M K + LV + + F AE + E
Sbjct: 487 ALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAME 546
Query: 387 GVLVSPNIFCALANAYAQQGLC--EQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYM 444
+ P + +L A + G C ++A+++ + M+ G PN + LI +
Sbjct: 547 FRIFDPESYNSLVKAVCETG-CGYKKALELQERMQRLGFVPNRLTCKYLIQV-------L 598
Query: 445 EAMSVYHHIKES 456
E S+ +H+ E+
Sbjct: 599 EQPSLPNHLPEN 610
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 140/332 (42%), Gaps = 5/332 (1%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
+++L+ ++ G +E+ + E+ GF + + ++ + + +V +
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
I +T+ +N + + F E KM++EG P++VT+N+L+ +CR G
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+A L+ M + + PD + ++I L + G+ + F M RG K Y L
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGE 421
+ + + G Q +++ + + V+ P+ F + + ++G A+ + +
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVV--PDRFTCKVIVEGFVREGRLLSAVNFVVELRRL 405
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI-KESGVSPDLVTYTTLMKAFIRTKKFDE 480
++ + + LI + G+ A + I +E G TY L+++ R +E
Sbjct: 406 KVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEE 465
Query: 481 VPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
++ +++ D K + L L + R
Sbjct: 466 ALVLKGKLKNQNQVLDAKTYRALIGCLCRIGR 497
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/406 (18%), Positives = 159/406 (39%), Gaps = 44/406 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ L+ K G ++ + ++ GF +S + HL+ L + + ++ M
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ P T+ IL + F +
Sbjct: 229 RVGIHPNTY-----------------------------------TFNILTNVFCNDSNFR 253
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + +M+ +GF+P+ Y+ +V Y G K+A + + + R++ D Y S+I
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
K G + EA + F +M G++P+ +++N+LI +C+EG ++ L +M +
Sbjct: 314 KGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Query: 320 PDPKIFVTIISCLGEQGK-WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
PD I+ +G+ + E + + + ++V + + F
Sbjct: 374 PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHL 433
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM----LNMLI 434
+ ++ EG P + L + ++ E+A+ +++G+ N V+ LI
Sbjct: 434 LDRIIEEEGHEAKPETYNNLIESLSRCDAIEEAL----VLKGKLKNQNQVLDAKTYRALI 489
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
GR EA S+ + +S V PD L+ + + FD+
Sbjct: 490 GCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDK 535
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC---LGEQGKWDTIKKC 344
V ++ L+K + + G + +F ++ + G V++++C L K D ++ C
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFS------VSVVTCNHLLNGLLKLDLMEDC 220
Query: 345 ---FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANA 401
+ M G + +L ++F F+ ++ ++ ++ EG + L ++
Sbjct: 221 WQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 402 YAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPD 461
Y ++G ++A + +IM + P++V LI GR EA +H + + G+ PD
Sbjct: 281 YCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD 340
Query: 462 LVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
++Y TL+ A+ + + + M + PDR
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDR 376
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+M D G T E+ + + GR++ EM+ PN + + ++ Y +G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
K E+L+++ YN++I + G L ALKL M K G++PN+VT+N
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI CR +A +F +M+ + P+ + T+I+ +QG + + +E M
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G ++ Y L+ + K + A + V+ L E ++ + + F AL + ++
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAF 437
++ + M G PN NML++AF
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 128/329 (38%), Gaps = 39/329 (11%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
T ++ L F + + T +MK GF P + + G A
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
E+R KIS + + N ++ + + G+L + ++L M++ G R V++N+LI HC +
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
G + AL L + M + GL P+ F T+I K K F M
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM------------ 334
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIM 418
+ V V+PN + L N Y+QQG E A + + M
Sbjct: 335 -------------------------KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
GI+ +I+ N LI + +A + + + P+ T++ L+ K
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 479 DEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
D +YK M GC P+ + ML A
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 154/402 (38%)
Query: 20 GALRCSSHATAIQFSKIPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEF 79
G+ +HA + S+ +R+ +VN D +F + +
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ L A QM+ GF + S + +L GR A ++EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
C + P N+ +M G T +Y L+ G L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
N M G QPN ++ ++ + ++A++V E++ ++ +T YN++I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + + G+ A + + M G++ +I+T+N+LI C++ KA ++ ++ L
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ F +I + D + ++SM G + +LV F + F A +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
++ + + + + N QG + K+LQ MEG+
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+M D G T E+ + + GR++ EM+ PN + + ++ Y +G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
K E+L+++ YN++I + G L ALKL M K G++PN+VT+N
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI CR +A +F +M+ + P+ + T+I+ +QG + + +E M
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G ++ Y L+ + K + A + V+ L E ++ + + F AL + ++
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAF 437
++ + M G PN NML++AF
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 128/329 (38%), Gaps = 39/329 (11%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
T ++ L F + + T +MK GF P + + G A
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
E+R KIS + + N ++ + + G+L + ++L M++ G R V++N+LI HC +
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
G + AL L + M + GL P+ F T+I K K F M
Sbjct: 287 GLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM------------ 334
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIM 418
+ V V+PN + L N Y+QQG E A + + M
Sbjct: 335 -------------------------KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
GI+ +I+ N LI + +A + + + P+ T++ L+ K
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 479 DEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
D +YK M GC P+ + ML A
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 154/402 (38%)
Query: 20 GALRCSSHATAIQFSKIPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEF 79
G+ +HA + S+ +R+ +VN D +F + +
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ L A QM+ GF + S + +L GR A ++EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
C + P N+ +M G T +Y L+ G L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
N M G QPN ++ ++ + ++A++V E++ ++ +T YN++I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + + G+ A + + M G++ +I+T+N+LI C++ KA ++ ++ L
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ F +I + D + ++SM G + +LV F + F A +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
++ + + + + N QG + K+LQ MEG+
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 134/301 (44%), Gaps = 8/301 (2%)
Query: 211 KGF---QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
KGF + + F+ + +G R+ + + +E + L +NS+I ++G G
Sbjct: 94 KGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGL 153
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ-GLYPDPKIFV 326
E++KLF M++ G+ P+++T+NSL+ + G A +LF +M+ G+ PD F
Sbjct: 154 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFN 213
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
T+I+ + D + F+ M Y ++D + GK + A + + +
Sbjct: 214 TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK 273
Query: 387 GVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYM 444
V PN+ + L Y + ++A+ V M G++PN V N LI S A RY
Sbjct: 274 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYD 333
Query: 445 EAMSVYHHIKE--SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQM 502
E + + + +PD T+ L+KA D +++ M PD + +
Sbjct: 334 EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSV 393
Query: 503 L 503
L
Sbjct: 394 L 394
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 170/448 (37%), Gaps = 69/448 (15%)
Query: 92 NLDRAMSLLAQMEALG---FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
NL+ A + L +E +L + LI + GN G E+ LF+ M G+ P +
Sbjct: 115 NLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVL 174
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDS-GIWRTRETYEILLDYFVSAGRLEDTWSTINE 207
+N EM + G+ T+ L++ F +++ + +
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD 234
Query: 208 MKMKGFQPNSFVYSKIV-GLYRD----------NGMWKKATEVLEEIRERKISLDTHIYN 256
M++ P+ Y+ I+ GL R +GM KKAT+V + Y
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS---------YT 285
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL----------------------- 293
+++ + E+ EA+ +F M G++PN VT+N+L
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDA 345
Query: 294 --------------IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWD 339
IK HC G A+ +F +M L+PD + +I L + ++D
Sbjct: 346 FTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFD 405
Query: 340 TIKKCFESMTSR-------GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
+ F + + K A Y + + GK + AE+ + L GV P
Sbjct: 406 RAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP 465
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
+ + L + ++G + A ++L +M P++ +LI+ G + A
Sbjct: 466 S-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR 524
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+ S P T+ +++ + K +E
Sbjct: 525 MLRSSYLPVATTFHSVLAELAKRKFANE 552
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 184/471 (39%), Gaps = 66/471 (14%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQM--EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKE 137
Y+ +I C+ G + A ++L+ M +A + SYT L+ EA ++F +
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRE--TYEILLDYFVSA 195
M+ GLKP YN D+ + T+ IL+ A
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD---- 251
G L+ EM P+S YS ++ + +A + E+ E+++ L
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 252 ---THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN 308
YN + + G+ +A K+F ++ K GV+ + ++ +LI HCREG + A
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYE 485
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGK----WDTIKKCFESMTSRGNKKYGAVYAVLV 364
L M + PD + + +I L + G+ DT+++ S + +V A L
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELA 545
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNI-----FCALANAYAQQGLCEQAIKVLQIME 419
KF N C+ L E + NI L + AQ+ E+A +++++
Sbjct: 546 K-----RKFANESFCLVTLMLEKR-IRQNIDLSTQVVRLLFSSAQK---EKAFLIVRLLY 596
Query: 420 GEG------------------IEPNIVML--------------NMLINAFSNAGRYMEAM 447
G ++ + ++L N +I R+ EA
Sbjct: 597 DNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAF 656
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM----ETDGCT 494
S+Y+ + E G L + L A K++E+ + KRM E+D C+
Sbjct: 657 SLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRESDDCS 707
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 40/227 (17%)
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+NSLI+ + G + +++ LF M++ G+ P F +++S L ++G+ F+ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM- 199
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN--IFCALANAYAQQGL 407
+ YG V+P+ F L N + + +
Sbjct: 200 ---RRTYG--------------------------------VTPDSYTFNTLINGFCKNSM 224
Query: 408 CEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI--KESGVSPDLVTY 465
++A ++ + ME P++V N +I+ AG+ A +V + K + V P++V+Y
Sbjct: 225 VDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 466 TTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
TTL++ + ++ DE +++ M + G P+ L L+ R
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 165/408 (40%), Gaps = 26/408 (6%)
Query: 110 LSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGL-KPRLNLYN--IXXXXXXXXXXXXXX 166
+S ++ I LGN G EA +F + GL P YN +
Sbjct: 139 MSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELV 198
Query: 167 XXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGL 226
EM D G + T +L + + G+ E S NE+ +G+ + + + +V
Sbjct: 199 EARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVS 257
Query: 227 YRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
+ G KA E++E + ER I L+ Y +I F K + +A +LF KM++ G+ +
Sbjct: 258 FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 317
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI----- 341
I ++ LI C+ D AL+L+ +++ G+ PD I ++ E+ + I
Sbjct: 318 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVII 377
Query: 342 ------------KKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALK--SEG 387
K FE N Y+ + ++ G Y + E V+ LK ++
Sbjct: 378 GDIDKKSVMLLYKSLFEGFIR--NDLVHEAYSFIQNLMGNY-ESDGVSEIVKLLKDHNKA 434
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
+L + + N + + A+ +L + G+ P +M N +I GR E++
Sbjct: 435 ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESL 494
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
+ +K++GV P T + F + K+M G P
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEP 542
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 192/464 (41%), Gaps = 32/464 (6%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
L + L+ CK G +D+A L+ +E +L+ +Y LI R +A L
Sbjct: 246 LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQL 305
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
F++M G+ + LY++ E+ SGI R LL F
Sbjct: 306 FEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSE 365
Query: 195 AGRLED-TWSTINEMKMK-----------GFQPNSFVY------SKIVGLYRDNGMWKKA 236
L T I ++ K GF N V+ ++G Y +G+
Sbjct: 366 ESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGV---- 421
Query: 237 TEVLEEIRE--RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
+E+++ +++ + I D+ + +I+ K ++ A+ L + + G+ P + +N++I
Sbjct: 422 SEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNII 481
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ----GKWDTIKKCFESMTS 350
+ C+EG ++L L +M++ G+ P I CL E+ G D +KK M
Sbjct: 482 EGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKK----MRF 537
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
G + + LV + G+ +A + + + EG L A + + ++
Sbjct: 538 YGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDR 597
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
+++ + + G P+++ ++LI A A R MEA +++ + G+ P + TY +++
Sbjct: 598 GLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMID 657
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERRS 514
+ + + D RM D PD L L A R S
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPS 701
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/322 (17%), Positives = 132/322 (40%)
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
+ I ++ I+++ V A +++ + ++++ G P +Y+ I+ G +
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
++ ++L E+++ + N I + + AL L KM+ G P I L+
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLV 551
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
K C G A D+ +G I L + D + F + + G+
Sbjct: 552 KKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKV 414
Y VL+ + + A+ + S+G+ + + ++ + + ++G ++ +
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 415 LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
+ M + P+++ LI+ +GR EA+ ++ +K P+ +T+ L++ +
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 475 TKKFDEVPIIYKRMETDGCTPD 496
E + ++ ME PD
Sbjct: 732 CGWSGEALVYFREMEEKEMEPD 753
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 122/295 (41%), Gaps = 6/295 (2%)
Query: 46 WIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEA 105
+I+N + N ESD + + + S+ S +I+ K +D A++LL +
Sbjct: 408 FIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQ 467
Query: 106 LGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXX 165
G Y ++IE + GR+ E+ L EM G++P N
Sbjct: 468 NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVG 527
Query: 166 XXXXXXEMVDSGI--WRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKI 223
+M G W T+ L+ GR D ++++ +GF + +
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTF--LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAA 585
Query: 224 V-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG 282
+ GL ++ G+ + E+ +I D Y+ +I K EA LF +M +G
Sbjct: 586 IDGLIKNEGV-DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKG 644
Query: 283 VRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
++P + T+NS+I C+EG+ + L+ M E PD + ++I L G+
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGR 699
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 116/294 (39%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
++V +G+ Y +++ GR E++ + EMK G +P+ F + I G +
Sbjct: 464 DIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERC 523
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ A ++L+++R ++ + G +A K + EG ++V
Sbjct: 524 DFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAST 583
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+ I + + L LF D+ G PD + +I L + + F M S+
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G K A Y ++D + + G+ C+ + + + +L + G +A
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTY 465
I M+G+ PN + LI G EA+ + ++E + PD Y
Sbjct: 704 IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 111/281 (39%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I CKEG + ++ LL +M+ G + S ++ + L A L K+M
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ G +P + ++ G +D + ++
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
++ G P+ Y ++ +A + E+ + + YNS+I
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMI 656
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D + K GE+ L V+M ++ P+++T+ SLI C G ++A+ +++M+ + Y
Sbjct: 657 DGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCY 716
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
P+ F+ +I L + G F M + + AVY
Sbjct: 717 PNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
K +DR + L + A G +Y LI+AL RT EAD+LF EM+ GLKP +
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
YN M + TY L+ ++GR + NEM
Sbjct: 651 TYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEM 710
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
K K PN + ++ G +A E+ E+++ D+ +Y S++ +F +
Sbjct: 711 KGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENI 770
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLI 294
+F +M +G P V N ++
Sbjct: 771 NAGFGIFREMVHKGRFPVSVDRNYML 796
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 196/465 (42%), Gaps = 56/465 (12%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM-LFKEMIYC 141
LI K + G+ + + L + E + + YS+ ++I L N EA + L++ M +
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTE----EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS 126
Query: 142 GLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRT-------------------- 181
GLKP YN + G+ R
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 182 ---------RET--YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDN 230
R+T + ++ + AG +D +M+ +GF+P+ ++G
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 246
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
G + + E +KI L T + + +I +GK G+L A ++F +M ++ + V W
Sbjct: 247 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM----IKKDRVAW 302
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
++I + + G ++A LF +M++ G+ PD T++S G G + + K E+ S
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALE-LGKQIETHAS 361
Query: 351 RGNKKYGAVYAV-LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
+ ++ A LVD++G+ G+ + A +A+ + + + A+ AYA QG +
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAK 417
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES-GVSPDLVTYTTL 468
+A+ + M + P+ + +++A +AG + +H + G+ P + YT +
Sbjct: 418 EALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNI 474
Query: 469 MKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERR 513
+ R DE ++ ME PD + ML L A +R
Sbjct: 475 IDLLSRAGMLDEA---WEFMERFPGKPD---EIMLAAILGACHKR 513
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 123/307 (40%), Gaps = 20/307 (6%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ +IS + G AM L +ME GF+ + ++ A ++G +L +EM
Sbjct: 201 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL-EEM- 258
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ ++ L + + I + R + ++ + G+
Sbjct: 259 --AITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSS 316
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + EM+ G P++ S ++ G + ++ E + + ++ ++
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLV 376
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D +GK G + EAL++F M + N TWN++I + +G +AL LF M +
Sbjct: 377 DMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRMS---VP 429
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV-----YAVLVDIFGQYGKFQ 374
P F+ ++S G + F M+S +G V Y ++D+ + G
Sbjct: 430 PSDITFIGVLSACVHAGLVHQGCRYFHEMSS----MFGLVPKIEHYTNIIDLLSRAGMLD 485
Query: 375 NAEECVQ 381
A E ++
Sbjct: 486 EAWEFME 492
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 122/260 (46%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+YN++++ + K G++ +AL+ + +M KE +P++ T+N LI +CR + AL+LF +M
Sbjct: 195 VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM 254
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
+E+G P+ F T+I GK + K M G + A +LVD + G+
Sbjct: 255 KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+A V L ++ VL S + +L + +A+++++ + +G P + L
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
+ +GR +A + +G+ PD VT+ L++ + + + + G
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGY 434
Query: 494 TPDRKAKQMLQDALTALERR 513
PD +L T RR
Sbjct: 435 EPDETTYHVLVSGFTKEGRR 454
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 138/342 (40%), Gaps = 39/342 (11%)
Query: 176 SGIWRTRETYEIL---LDYFVSAGRLEDTWSTINEMK-MKGFQPNSFVYSKIVGLYRDNG 231
SGI+ E I +D + A +++ + MK + +PN VY+ +V Y +G
Sbjct: 148 SGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSG 207
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
KA + + + + D +N +I+ + + + AL LF +M+++G PN+V++N
Sbjct: 208 DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 292 SLIKWH-----------------------------------CREGDYTKALNLFSDMQEQ 316
+LI+ CREG A L D+ +
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
+ P + +++ L + K + E + +G LV+ + G+ + A
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
++ + + G+L F L A ++ + +G EP+ ++L++
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSG 447
Query: 437 FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
F+ GR E + + + + + PD+ TY LM T KF
Sbjct: 448 FTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 119/298 (39%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +++ K G++D+A+ +M + ++ LI + A LF+EM
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G +P + +N EM++ G + T EIL+D GR++
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + ++ K P+ F Y +V +A E++EE+ ++ + +++
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ K G +A KM G+ P+ VT+N L++ C T A L +G
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
PD + ++S ++G+ + M + Y L+D GKF +
Sbjct: 436 PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 75 LSSEF-YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
L SEF Y L+ K C E RAM ++ ++ G + T L+E L GRT +A
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
++M+ G+ P +N+ G TY +L+ F
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIV 224
GR ++ +NEM K P+ F Y++++
Sbjct: 450 KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 134/300 (44%), Gaps = 2/300 (0%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
+T+ I+ + + SAG+ + M G + ++ I+ + + +KA E+
Sbjct: 127 KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRA 186
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
+R R S+DT YN I++ + +AL++ +M + G+ PN+ T+N+++K R G
Sbjct: 187 LRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
A F +M+++ D + T++ G G+ + F+ M G A Y
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
++ + + +NA + + G + + L G + +++Q ME EG
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA-FIRTKKFDEV 481
EPN NM+I +S +A+ ++ + P+L TY L+ F+R + D V
Sbjct: 366 CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 140/329 (42%), Gaps = 1/329 (0%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++++ +D WS I+ M+ P+ ++ + Y G KA ++ +
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
E D +N+I+D K + +A +LF ++ + VT+N ++ C
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRT 211
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
KAL + +M E+G+ P+ + T++ G+ + F M R + Y +
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
V FG G+ + A + EGVL S + A+ ++ E A+ + + M G
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY 331
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
EPN+ N+LI +AG + + ++ G P+ TY +++ + + ++
Sbjct: 332 EPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALG 391
Query: 484 IYKRMETDGCTPDRKAKQMLQDALTALER 512
++++M + C P+ +L + +R
Sbjct: 392 LFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 117/279 (41%), Gaps = 9/279 (3%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLF 135
S + ++ + + G D+A+ L M G S+ +++ L R +A LF
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 136 KEMIYCGLKPRLNL----YNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+ L+ R ++ YN+ EMV+ GI TY +L
Sbjct: 185 R-----ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
F AG++ W EMK + + + Y+ +V + G K+A V +E+ +
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
YN++I K + A+ +F +M + G PN+ T+N LI+ G++++ L
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
M+ +G P+ + + +I E + + FE M S
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 2/216 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +++ C +A+ +L +M G + +Y +++ G+ A F EM
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ + Y EM+ G+ + TY ++ +E
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ EM +G++PN Y+ ++ GL+ G + + E+++ + + YN +
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA-GEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
I + + E+ +AL LF KM PN+ T+N LI
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 121/263 (46%), Gaps = 3/263 (1%)
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
I D +N +I F K + +A + M+ P++VT+ S ++ +C+EGD+ +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+ +M+E G P+ + ++ LG+ + +E M G Y+ L+ I
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM---EGEGIE 424
+ G+F++A E + + ++GV ++ + +A E A+++L+ M EGE
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
PN+ L+ + + + HH+ ++ VS D+ TY L++ + K +E +
Sbjct: 449 PNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLF 508
Query: 485 YKRMETDGCTPDRKAKQMLQDAL 507
++ G P +ML D L
Sbjct: 509 FEEAVRKGMVPRDSTCKMLVDEL 531
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ IL+ F A + +D + ++ MK+ F P+ Y+ V Y G +++ E+LEE+
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
RE + + Y ++ + GK ++ EAL ++ KM+++G P+ ++SLI + G +
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIIS 330
A +F DM QG+ D ++ T+IS
Sbjct: 395 KDAAEIFEDMTNQGVRRDVLVYNTMIS 421
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 112/247 (45%), Gaps = 4/247 (1%)
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQK--EGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
H YN+++D GK +L +M K E + T + +++ + G Y KA++ F
Sbjct: 167 HTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF 226
Query: 311 SDMQEQ-GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ 369
+M++ G+ D +++ L ++ + + F + K + +L+ F +
Sbjct: 227 LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCK 285
Query: 370 YGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
KF +A + +K + + AY ++G + ++L+ M G PN+V
Sbjct: 286 ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVT 345
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+++++ + + EA+ VY +KE G PD Y++L+ +T +F + I++ M
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMT 405
Query: 490 TDGCTPD 496
G D
Sbjct: 406 NQGVRRD 412
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 111/289 (38%), Gaps = 38/289 (13%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI CK D A +++ M+ F +YT +EA G + + +EM
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P + Y I V + ++++ E L Y
Sbjct: 336 ENGCNPNVVTYTI---------------------VMHSLGKSKQVAEALGVY-------- 366
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+MK G P++ YS ++ + G +K A E+ E++ + + D +YN++I
Sbjct: 367 ------EKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMI 420
Query: 260 DTFGKYGELGEALKLFVKMQK---EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
+ AL+L +M+ E PN+ T+ L+K C + L M +
Sbjct: 421 SAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKN 480
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
+ D ++ +I L GK + FE +G + +LVD
Sbjct: 481 DVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 154/335 (45%), Gaps = 31/335 (9%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
E SGI ++ LL V + +L+ ++ + GF N + I+ Y G
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ A +E+ + D HI+ ++I + K G++ A KLF +M ++ N V+W
Sbjct: 229 QMESAKRCFDEMTVK----DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWT 280
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIK--KCFESMT 349
+LI + R+G +AL+LF M G+ P+ T SCL +++ K
Sbjct: 281 ALIAGYVRQGSGNRALDLFRKMIALGVKPEQ---FTFSSCLCASASIASLRHGKEIHGYM 337
Query: 350 SRGNKKYGA-VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC 408
R N + A V + L+D++ + G + +E + + V N + +A AQ GL
Sbjct: 338 IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWN---TMISALAQHGLG 394
Query: 409 EQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAG------RYMEAMSVYHHIKESGVSPDL 462
+A+++L M ++PN L +++NA S++G R+ E+M+V H G+ PD
Sbjct: 395 HKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQH-----GIVPDQ 449
Query: 463 VTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
Y L+ R F E + +++E PD+
Sbjct: 450 EHYACLIDLLGRAGCFKE---LMRKIEEMPFEPDK 481
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 125/266 (46%), Gaps = 17/266 (6%)
Query: 207 EMKMKGFQ-PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKY 265
+K+ GF+ PN+ + + ++G+Y G A +V +++ R + + +N+++ + K
Sbjct: 71 HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNL----YSWNNMVSGYVKS 126
Query: 266 GELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIF 325
G L A +F M + ++V+WN+++ + ++G+ +AL + + + G+ + F
Sbjct: 127 GMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 326 VTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKS 385
+++ + + ++ + G + ++D + + G+ ++A+ C +
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 386 EGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYME 445
+ + +I+ L + YA+ G E A K+ M E N V LI + G
Sbjct: 243 KDI----HIWTTLISGYAKLGDMEAAEKLFCEMP----EKNPVSWTALIAGYVRQGSGNR 294
Query: 446 AMSVYHHIKESGVSPDLVTYTTLMKA 471
A+ ++ + GV P+ T+++ + A
Sbjct: 295 ALDLFRKMIALGVKPEQFTFSSCLCA 320
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/299 (16%), Positives = 132/299 (44%), Gaps = 16/299 (5%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
L+ ++ G+ D ++M ++ N + ++ +V Y +GM +A V + + ER
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLR----NLYSWNNMVSGYVKSGMLVRARVVFDSMPER- 142
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
D +N+++ + + G L EAL + + ++ G++ N ++ L+ +
Sbjct: 143 ---DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+ G + + +II + G+ ++ K+CF+ MT + ++ L+ +
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISGY 255
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G + AE+ + + +P + AL Y +QG +A+ + + M G++P
Sbjct: 256 AKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQ 311
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
+ + A ++ ++ ++ + V P+ + ++L+ + ++ + +++
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 146/382 (38%), Gaps = 24/382 (6%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E R G + + ++ L++ C K L Q+ GF + +I+A G
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ A F EM ++++ EM + + ++
Sbjct: 229 QMESAKRCFDEMTV----KDIHIWTTLISGYAKLGDMEAAEKLFCEMPE----KNPVSWT 280
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
L+ +V G +M G +P F +S + + E+ +
Sbjct: 281 ALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT 340
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ + + +S+ID + K G L + ++F + + V WN++I + G KA
Sbjct: 341 NVRPNAIVISSLIDMYSKSGSLEASERVFRICDD---KHDCVFWNTMISALAQHGLGHKA 397
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV-----YA 361
L + DM + + P+ V I++ G + + FESMT ++G V YA
Sbjct: 398 LRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV----QHGIVPDQEHYA 453
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
L+D+ G+ G F+ ++ + E N + + + L ++A L ++ E
Sbjct: 454 CLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPE 513
Query: 422 GIEPNIVMLNMLINAFSNAGRY 443
P I +L + +++ G++
Sbjct: 514 SSAPYI----LLSSIYADHGKW 531
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 130/347 (37%), Gaps = 55/347 (15%)
Query: 78 EFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKE 137
++ LIS K G+++ A L +M + + S+T LI G + A LF++
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMP----EKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 138 MIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
MI G+KP + T+ L S
Sbjct: 302 MIALGVKPE-----------------------------------QFTFSSCLCASASIAS 326
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
L M +PN+ V S ++ +Y +G + + V ++ D +N+
Sbjct: 327 LRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH---DCVFWNT 383
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ- 316
+I ++G +AL++ M K V+PN T ++ G + L F M Q
Sbjct: 384 MISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQH 443
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK-YGAVYAVLVDIFGQYGKFQN 375
G+ PD + + +I LG G + + + E M +K + A+ V +
Sbjct: 444 GIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVC--------RIHG 495
Query: 376 AEECVQALKSEGVLVSPNI---FCALANAYAQQGLCEQAIKVLQIME 419
EE + E + + P + L++ YA G E K+ +M+
Sbjct: 496 NEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMK 542
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 5/317 (1%)
Query: 115 YTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV 174
Y+ LI +G G+T A LF EM G +P ++YN +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 175 DS--GIWRTRE---TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRD 229
D GI R + TY ILL F +G+++ + ++ M P+ + ++ ++ Y
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
NGM K+ VL +R + D +N +ID++GK E + + F + + +P + T
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+NS+I + + KA +F M + P + +I G G ++ FE +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
+ +++++ + G + A++ + V + + L AY + + E
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 410 QAIKVLQIMEGEGIEPN 426
Q +++ ME +GI PN
Sbjct: 436 QVQILMKKMEKDGIVPN 452
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 137/330 (41%), Gaps = 40/330 (12%)
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII----DTFGK 264
K + + P++ VYSK++ + G + A + E++ D +YN++I T K
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 265 YGELGEALKLFVKMQK-EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
L + KM+ E +PN+VT+N L++ + G + LF D+ + PD
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 324 IFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
F ++ G+ G ++ M S K + VL+D +G+ +F+ E+ ++L
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 384 --------------------------KSEGVLVSPN------IFCALANAYAQQGLCEQA 411
K+E V N F G C
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 412 IKVLQIMEGEGIEPNIV---MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
+ +I E G ++ LN ++ + G Y+EA ++H+ V PD TY L
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 469 MKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
KA+ + ++V I+ K+ME DG P+++
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 101/256 (39%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ + G +D+ +L ++ Y++ +++A G G E + + M
Sbjct: 211 YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
KP + +N+ ++ S T T+ ++ + A ++
Sbjct: 271 SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+M + P+ Y ++ +Y G +A E+ EE+ E L N+++
Sbjct: 331 KAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + + G EA KLF V P+ T+ L K + + + L M++ G+
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Query: 320 PDPKIFVTIISCLGEQ 335
P+ + F+ + G +
Sbjct: 451 PNKRFFLEALEVFGSR 466
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 18/304 (5%)
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
VS G E+ M+ +G + ++ I+ R G + ++ + + +
Sbjct: 134 VSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENL 193
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
H+ N ++ + K G +G+A LFV+M VR N ++WN +IK +E D A+ +F
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMP---VR-NRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
MQ + PD + +++SC + GK++ + K F M GN G AV + +
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 373 FQNAEECVQALKSEGV---LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
AE+ + G L S N AL + Y +QG + A + + + +GIE
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRN---ALIHVYGKQGKVKDAEHLFRQIRNKGIES---- 362
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKE----SGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
N LI +F +AG+ EA+S++ ++E V ++VT+T+++K + D+ +
Sbjct: 363 WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYF 422
Query: 486 KRME 489
++M+
Sbjct: 423 RQMQ 426
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 13/282 (4%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
GF+ + ++ +Y G K A + +IR + I +NS+I +F G+L EA
Sbjct: 324 GFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE----SWNSLITSFVDAGKLDEA 379
Query: 272 LKLFVKMQKEG----VRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
L LF ++++ V+ N+VTW S+IK +G +L F MQ + +
Sbjct: 380 LSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICC 439
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
I+S E + ++ + + V LV+++ + G +A++ +
Sbjct: 440 ILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKD 499
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
L+S N ++ Y G E+A+ + M G P+ + L +++A S+AG +
Sbjct: 500 -LISWN---SIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGR 555
Query: 448 SVYHHI-KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
+++ + K G+ P Y ++ R E I K M
Sbjct: 556 EIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 11/256 (4%)
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
GR +D+ +M+ NS I+ + + E+ + +S + +
Sbjct: 413 GRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQ 472
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVR-PNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
N++++ + K G L E +F E +R ++++WNS+IK + G KAL++F M
Sbjct: 473 NALVNMYAKCGLLSEGSLVF-----EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMI 527
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR-GNKKYGAVYAVLVDIFGQYGKF 373
G +PD V ++S G + ++ F SM+ R G + YA +VD+ G+ G
Sbjct: 528 SSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFL 587
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+ A E V+ + E + + + E L ++E E + +L
Sbjct: 588 KEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYM----LL 643
Query: 434 INAFSNAGRYMEAMSV 449
N +S GR+ E+ +V
Sbjct: 644 SNIYSAGGRWEESANV 659
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 116/262 (44%), Gaps = 12/262 (4%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
G + N V ++++ LY G A + E+ R + +N +I F + + A
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR----NRMSWNVMIKGFSQEYDCESA 243
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+K+F MQ+E +P+ VTW S++ H + G + L F M+ G + S
Sbjct: 244 VKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSV 303
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
E +K + G ++Y L+ ++G+ GK ++AE + ++++G+
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI--- 360
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGE----GIEPNIVMLNMLINAFSNAGRYMEAM 447
+ +L ++ G ++A+ + +E ++ N+V +I + GR +++
Sbjct: 361 -ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 448 SVYHHIKESGVSPDLVTYTTLM 469
+ ++ S V + VT ++
Sbjct: 420 EYFRQMQFSKVLANSVTICCIL 441
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/436 (18%), Positives = 161/436 (36%), Gaps = 59/436 (13%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
++ ++ G + A+ L M G Y ++ A +GR ++
Sbjct: 125 LWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
I GLK L++ N EM R R ++ +++ F
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPV----RNRMSWNVMIKGFSQEYDC 240
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATE-------------------- 238
E M+ + F+P+ ++ ++ + G ++ +
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVF 300
Query: 239 --VLEEIRERKISLDTHIY-------------NSIIDTFGKYGELGEALKLFVKMQKEGV 283
V E+ I+ H Y N++I +GK G++ +A LF +++ +G+
Sbjct: 301 FSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI 360
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK----IFVTIISCLGEQGKWD 339
+WNSLI G +AL+LFS+++E + K + ++I QG+ D
Sbjct: 361 E----SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 340 TIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE----CVQALKSEGVLVSPNIF 395
+ F M ++ I + E ++ SE +LV
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQN--- 473
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
AL N YA+ GL + V + + + +++ N +I + G +A+S++ +
Sbjct: 474 -ALVNMYAKCGLLSEGSLVFEAIR----DKDLISWNSIIKGYGMHGFAEKALSMFDRMIS 528
Query: 456 SGVSPDLVTYTTLMKA 471
SG PD + ++ A
Sbjct: 529 SGFHPDGIALVAVLSA 544
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
++I + + G L +A +F + + ++ WNS++K + G Y AL L+ M+++
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLV-LLSDLRLWNSILKANVSHGLYENALELYRGMRQR 152
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
GL D I I+ G++ + + G K+ V L+ ++ + G+ +A
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+ + S N+ + ++Q+ CE A+K+ + M+ E +P+ V +++
Sbjct: 213 YNLFVEMPVRNRM-SWNV---MIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 437 FSNAGRYMEAMSVYHHIKESG 457
S G++ + + +H ++ SG
Sbjct: 269 HSQCGKFEDVLKYFHLMRMSG 289
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 5/317 (1%)
Query: 115 YTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV 174
Y+ LI +G G+T A LF EM G +P ++YN +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 175 DS--GIWRTRE---TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRD 229
D GI R + TY ILL F +G+++ + ++ M P+ + ++ ++ Y
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
NGM K+ VL +R + D +N +ID++GK E + + F + + +P + T
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
+NS+I + + KA +F M + P + +I G G ++ FE +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
+ +++++ + G + A++ + V + + L AY + + E
Sbjct: 376 ESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKE 435
Query: 410 QAIKVLQIMEGEGIEPN 426
Q +++ ME +GI PN
Sbjct: 436 QVQILMKKMEKDGIVPN 452
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 137/330 (41%), Gaps = 40/330 (12%)
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII----DTFGK 264
K + + P++ VYSK++ + G + A + E++ D +YN++I T K
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 265 YGELGEALKLFVKMQK-EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
L + KM+ E +PN+VT+N L++ + G + LF D+ + PD
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 324 IFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
F ++ G+ G ++ M S K + VL+D +G+ +F+ E+ ++L
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 384 --------------------------KSEGVLVSPN------IFCALANAYAQQGLCEQA 411
K+E V N F G C
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 412 IKVLQIMEGEGIEPNIV---MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
+ +I E G ++ LN ++ + G Y+EA ++H+ V PD TY L
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 469 MKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
KA+ + ++V I+ K+ME DG P+++
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 101/256 (39%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+ + G +D+ +L ++ Y++ +++A G G E + + M
Sbjct: 211 YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
KP + +N+ ++ S T T+ ++ + A ++
Sbjct: 271 SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+M + P+ Y ++ +Y G +A E+ EE+ E L N+++
Sbjct: 331 KAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAML 390
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + + G EA KLF V P+ T+ L K + + + L M++ G+
Sbjct: 391 EVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIV 450
Query: 320 PDPKIFVTIISCLGEQ 335
P+ + F+ + G +
Sbjct: 451 PNKRFFLEALEVFGSR 466
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 103/219 (47%)
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
M + ++ ++V +++ C++G++ A NLF++M E+G++P+ + +I G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
W + M + ++ L++ F + K AEE + + + + + +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
+ + + +Q + A ++L M +G P++V + LIN + A R M ++ + G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 458 VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ + VTYTTL+ F + D + M + G PD
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 10/240 (4%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ ++ + CK+GN A +L +M G + +Y +I++ + GR S+AD L + MI
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
+ P + ++ EM+ I+ T TY ++D F R++D
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLY-----RDNGMWKKATEVLEEIRERKISLDTHIY 255
++ M KG P+ +S ++ Y DNGM E+ E+ R I +T Y
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM-----EIFCEMHRRGIVANTVTY 188
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
++I F + G+L A L +M GV P+ +T++ ++ C + + KA + D+Q+
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 4/236 (1%)
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
+ I D I +I+D K G A LF +M ++G+ PN++T+N +I C G ++
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
A L M E+ + PD F +I+ ++ K ++ ++ M Y ++
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEG 422
D F + + +A+ + ++ S+G SP++ F L N Y + + +++ M G
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKG--CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
I N V LI+ F G A + + + GV+PD +T+ ++ K+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 2/233 (0%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
++D G + + EM KG PN Y+ ++ + +G W A ++L + E++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
I+ D ++++I+ F K ++ EA +++ +M + + P +T+NS+I C++ A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+ M +G PD F T+I+ + + D + F M RG Y L+ F
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIF-CALANAYAQQGLCEQAIKVLQIME 419
Q G A++ + + S GV F C LA +++ L +A +L+ ++
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL-RKAFAILEDLQ 247
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EM + GI+ TY ++D F +GR D + M K P+ +S ++ +
Sbjct: 35 EMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKER 94
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+A E+ +E+ I T YNS+ID F K + +A ++ M +G P++VT++
Sbjct: 95 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS 154
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+LI +C+ + +F +M +G+ + + T+I + G D + M S
Sbjct: 155 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 214
Query: 352 G 352
G
Sbjct: 215 G 215
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 114/249 (45%)
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
M + + + + IV +G A + E+ E+ I + YN +ID+F G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
+A +L M ++ + P+IVT+++LI +E ++A ++ +M ++P + +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+I +Q + D K+ +SM S+G ++ L++ + + + N E + G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
++ + + L + + Q G + A +L M G+ P+ + + ++ + +A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 448 SVYHHIKES 456
++ +++S
Sbjct: 241 AILEDLQKS 249
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 140/302 (46%), Gaps = 2/302 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EM G+ T ET+ I + F +A + MK F+ + ++
Sbjct: 220 EMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAK 278
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ K+A + ++++ER + + Y +++ + + L EA +++ M +G++P+IV N
Sbjct: 279 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHN 337
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+++ R + A+ LF M+ +G P+ + + +I +Q +T + F+ M
Sbjct: 338 VMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G + AVY L+ FG K E ++ ++ +G + AL A Q + E A
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHA 457
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
++ M IEP+I NM++ ++ A Y +V+ + + G+ PD +YT L++
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 472 FI 473
I
Sbjct: 518 LI 519
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 120/293 (40%)
Query: 108 FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXX 167
F + +YT L+ V EA ++ +MI GLKP + +N+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 168 XXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLY 227
M G +Y I++ F +E ++M G QP++ VY+ ++ +
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 228 RDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNI 287
E+L+E++E+ D YN++I A +++ KM + + P+I
Sbjct: 414 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSI 473
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES 347
T+N ++K + +Y ++ +M ++G+ PD + +I L +GK + E
Sbjct: 474 HTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEE 533
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALAN 400
M +G K Y F + G+ + EE Q K G + IF A
Sbjct: 534 MLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQ 586
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 2/156 (1%)
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
Y ++ I + +F+ ++ + ++G+L A+ A+A ++A+ + ++M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAM-KAFAAAKERKKAVGIFELM 255
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
+ + + +N L+++ A EA ++ +KE +P+++TYT L+ + R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNL 314
Query: 479 DEVPIIYKRMETDGCTPDRKAKQMLQDALTALERRS 514
E I+ M G PD A ++ + L ++S
Sbjct: 315 IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKS 350
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 7/265 (2%)
Query: 240 LEEIRERKISLDTH------IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
LE+++ER S+D YN +I + G +ALKLF +M K+ V+P VT+ +L
Sbjct: 134 LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTL 193
Query: 294 IKWHCREGDYTKALNLFSDM-QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
I C++ +AL + DM + G+ P I+ ++I L + G+ K +
Sbjct: 194 IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGK 253
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
K A+Y+ L+ + G+ ++ + +G + L N + + E A
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+VL M +G++P+++ NM++ F ++ EA ++ + G SPD ++Y +
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDR 497
+F+E +I M G P R
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRR 398
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
P ++ ++ + + +A + +E+ + + NS++ K GEL E +K
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGEL-EKMKE 139
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
+ E +P+ T+N LI + G + AL LF +M ++ + P F T+I L +
Sbjct: 140 RLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 335 QGKW-DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN 393
+ + +K + + G + +YA L+ Q G+ A + + V
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 394 IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI 453
I+ L ++ + G + +L+ M +G +P+ V N+LIN F A V +
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 454 KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
E G+ PD+++Y ++ F R KK++E +++ M GC+PD + +++ D L
Sbjct: 320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 144 KPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWS 203
KP YNI EMV + T T+ L+ R+++
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 204 TINEM-KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTF 262
++M K+ G +P +Y+ ++ G A ++ +E E KI +D IY+++I +
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 263 GKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDP 322
K G E + +M ++G +P+ VT+N LI C E D A + +M E+GL PD
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 323 KIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
+ I+ KW+ FE M RG Y ++ D + +F+ A
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 2/286 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI C + G D A+ L +M + + ++ LI L R EA + +M+
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 140 YC-GLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
G++P +++Y E + I Y L+ + AGR
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ + EM KG +P++ Y+ ++ + + A VL+E+ E+ + D YN I
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ F + + EA LF M + G P+ +++ + C + +A + +M +G
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
P + L E GK + + K S+ RG V++V++
Sbjct: 395 KPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVMI 439
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E + G ++ ++ LI C + G +A+ + + ++ +SY ++ +L V
Sbjct: 174 EMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ + ++K+M+ G P + YNI EM G TY
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER 246
ILL + +T+N MK G P+ Y+ ++ G + L+E+ +
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKA 306
D Y +I + GEL +A ++F +M +G PN+ T+NS+I+ C G++ +A
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 413
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN 353
L +M+ +G P+ ++ T++S L + GK +K M +G+
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 132/314 (42%), Gaps = 4/314 (1%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
T +Y +L+ F G + W ++EM GF + ++ ++ + G+ K+A
Sbjct: 148 TVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQF 207
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ + H YN+I+++ + ++ +M ++G P+++T+N L+ + R
Sbjct: 208 MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRL 267
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
G + LF +M G PD + ++ LG+ K M G Y
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIM 418
L+D + G + + + + G P++ C + Y G ++A ++ + M
Sbjct: 328 TTLIDGLSRAGNLEACKYFLDEMVKAGC--RPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
+G PN+ N +I AG + EA + ++ G +P+ V Y+TL+ + K
Sbjct: 386 TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 479 DEVPIIYKRMETDG 492
E + + M G
Sbjct: 446 SEARKVIREMVKKG 459
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 132/308 (42%), Gaps = 3/308 (0%)
Query: 82 QLISKCCKEGNLDRAM-SLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
L+ K E +AM L+ +M GF ++ ++ LI + G G +A + F +
Sbjct: 153 HLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKT 212
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
+P + YN +M++ G TY ILL G+++
Sbjct: 213 FNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDR 272
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
+EM GF P+S+ Y+ ++ + A L ++E I Y ++ID
Sbjct: 273 FDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLID 332
Query: 261 TFGKYGELGEALKLFV-KMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ G L EA K F+ +M K G RP++V + +I + G+ KA +F +M +G
Sbjct: 333 GLSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P+ + ++I L G++ + M SRG VY+ LV + GK A +
Sbjct: 392 PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKV 451
Query: 380 VQALKSEG 387
++ + +G
Sbjct: 452 IREMVKKG 459
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 4/294 (1%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EMV G T T+ +L+ AG + + K ++P Y+ I+
Sbjct: 174 EMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+K V +++ E S D YN ++ T + G++ +LF +M ++G P+ T+N
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
L+ + AL + M+E G+ P + T+I L G + K + M
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCE 409
G + Y V++ + G+ A+E + + +G L PN+F ++ G
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL--PNVFTYNSMIRGLCMAGEFR 411
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
+A +L+ ME G PN V+ + L++ AG+ EA V + + G LV
Sbjct: 412 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLV 465
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%)
Query: 102 QMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXX 161
QM GF +Y L+ +G+ D LF EM G P YNI
Sbjct: 244 QMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGN 303
Query: 162 XXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYS 221
M + GI + Y L+D AG LE ++EM G +P+ Y+
Sbjct: 304 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYT 363
Query: 222 KIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE 281
++ Y +G KA E+ E+ + + YNS+I GE EA L +M+
Sbjct: 364 VMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
G PN V +++L+ + + G ++A + +M ++G Y
Sbjct: 424 GCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHY 461
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 137/293 (46%), Gaps = 1/293 (0%)
Query: 207 EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG 266
EM G + ++ YS I+ + ++ KA E E + + + D Y++I+D + K G
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
++ E L L+ + G +P+ + ++ L K GDY + +M+ + P+ ++
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
T++ +G GK + F M G LV I+G+ ++A + + +K++
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 387 GVLVSPNIFCALANAYAQQGLCEQAIKVLQIM-EGEGIEPNIVMLNMLINAFSNAGRYME 445
+ ++ L N A GL E+A ++ M E P+ ++N + + G+ +
Sbjct: 391 KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 446 AMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
AM ++ + ++GV +++ T L++ + K+ D+V ++ G PD +
Sbjct: 451 AMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDR 503
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 133/296 (44%), Gaps = 2/296 (0%)
Query: 199 EDTWSTINEMKMKGFQP-NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+ T + N +K K P + Y+ + R ++ E+ E+ + + LD Y++
Sbjct: 167 QKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYST 226
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
II + +A++ F +M K G+ P+ VT+++++ + + G + L+L+ G
Sbjct: 227 IITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATG 286
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
PD F + GE G +D I+ + M S K VY L++ G+ GK A
Sbjct: 287 WKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLAR 346
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
+ G+ + AL Y + A+++ + M+ + + ++ N L+N
Sbjct: 347 SLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMC 406
Query: 438 SNAGRYMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
++ G EA +++ +KES PD +YT ++ + K ++ +++ M G
Sbjct: 407 ADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 139/298 (46%), Gaps = 3/298 (1%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
M +G+ TY +LD + +G++E+ S G++P++ +S + ++ + G
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
+ VL+E++ + + +YN++++ G+ G+ G A LF +M + G+ PN T +
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT-SR 351
L+K + + AL L+ +M+ + D ++ T+++ + G + ++ F M S
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESV 426
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
+ Y +++I+G GK + A E + + GV V+ L + +
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDV 486
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+ V + G++P+ + L++ + +A V ++ + + LVT+ L+
Sbjct: 487 VYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERA--NKKLVTFVNLI 542
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 129/307 (42%), Gaps = 38/307 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
YS ++ K G ++ +SL + A G++ + +++ L + G G + +EM
Sbjct: 259 YSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMK 318
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+KP + +YN LL+ AG+
Sbjct: 319 SMDVKPNVVVYN-----------------------------------TLLEAMGRAGKPG 343
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
S NEM G PN + +V +Y + A ++ EE++ +K +D +YN+++
Sbjct: 344 LARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL 403
Query: 260 DTFGKYGELGEALKLFVKMQKEGV--RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+ G EA +LF M KE V RP+ ++ +++ + G KA+ LF +M + G
Sbjct: 404 NMCADIGLEEEAERLFNDM-KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
+ + ++ CLG+ + D + F+ RG K + L+ + ++AE
Sbjct: 463 VQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAE 522
Query: 378 ECVQALK 384
+ + L+
Sbjct: 523 KVMACLE 529
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 9/236 (3%)
Query: 265 YGELGEALKLFVKMQKEGVRPN-IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
+ E E L L ++ R N ++ NSL +W K F+ ++ + L+P
Sbjct: 134 FTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQ-------KTHTFFNWVKSKSLFPMET 186
Query: 324 IFVTI-ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQA 382
IF + + L ++ I++ M G + Y+ ++ + + A E +
Sbjct: 187 IFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFER 246
Query: 383 LKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGR 442
+ G++ + A+ + Y++ G E+ + + + G +P+ + ++L F AG
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 443 YMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRK 498
Y V +K V P++V Y TL++A R K ++ M G TP+ K
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEK 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
FG+ +FQ EE + +GV + + + + L +AI+ + M G+ P+
Sbjct: 198 FGR--QFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPD 255
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
V + +++ +S +G+ E +S+Y +G PD + ++ L K F +D + + +
Sbjct: 256 EVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQ 315
Query: 487 RMETDGCTPDRKAKQMLQDAL 507
M++ P+ L +A+
Sbjct: 316 EMKSMDVKPNVVVYNTLLEAM 336
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 158/364 (43%), Gaps = 25/364 (6%)
Query: 101 AQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXX 160
Q+ GF S + T LI+ + G +A +F EM L +N++N
Sbjct: 140 GQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM----LVKDVNVWN-ALLAGYGK 194
Query: 161 XXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVY 220
EM+ + R ++ ++ + +GR + M M+ +P+
Sbjct: 195 VGEMDEARSLLEMMPCWV-RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 221 SKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQK 280
++ D G + + + R ++ + N++ID + K G + +AL +F + +
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE 313
Query: 281 EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDT 340
N+VTW ++I G +AL +F+ M + G+ P+ F+ I+S G D
Sbjct: 314 R----NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDL 369
Query: 341 IKKCFESMTSRGNKKYGA-----VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
K+ F SM S KYG Y ++D+ G+ GK + A+E ++++ +
Sbjct: 370 GKRLFNSMRS----KYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSL 425
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLI-NAFSNAGRYMEAMSVYHHIK 454
A +N + L E+A+ L +EPN ML+ N +SN GR+ E+ + + +K
Sbjct: 426 LAASNVHHDLELGERALSELI-----KLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMK 480
Query: 455 ESGV 458
GV
Sbjct: 481 GIGV 484
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 123/280 (43%), Gaps = 48/280 (17%)
Query: 195 AGRLEDTW---STINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
A R+ D W ++ + GF + V + ++ +Y G A ++ +E+ + D
Sbjct: 126 AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK----D 181
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+++N+++ +GK GE+ EA L +M VR N V+W +I + + G ++A+ +F
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLL-EMMPCWVR-NEVSWTCVISGYAKSGRASEAIEVFQ 239
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
M + + PD + ++S + G + ++ + RG + ++ ++D+
Sbjct: 240 RMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDM----- 294
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
YA+ G +A+ V + + E N+V
Sbjct: 295 ------------------------------YAKSGNITKALDVFECVN----ERNVVTWT 320
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+I + G EA+++++ + ++GV P+ VT+ ++ A
Sbjct: 321 TIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 120/252 (47%), Gaps = 1/252 (0%)
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
E K L YN+++ + ++G + E +L+ +M ++ V P+I T+N+L+ +C+ G
Sbjct: 113 EIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVV 172
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
+A + + + G PD + + I+ + + D K F+ MT G + Y L+
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI 232
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ K A + +K + + + L +A G +A+ + + M GI+
Sbjct: 233 YGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIK 292
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
P+ M +LI +F + EA + H+ E+G+ P+++TY L+K F + + ++
Sbjct: 293 PDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLL 352
Query: 485 YKRMETDGCTPD 496
K +E + PD
Sbjct: 353 SKMLEQN-LVPD 363
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 1/269 (0%)
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
G+ ++ + E+ E +S D + +N++++ + K G + EA + + + G P+ T+
Sbjct: 134 GLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTY 193
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
S I HCR + A +F +M + G + + + +I L E K D M
Sbjct: 194 TSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD 253
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
Y VL+D G+ A + + G+ ++ L ++ ++
Sbjct: 254 DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDE 313
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
A +L+ M G+ PN++ N LI F + +AM + + E + PDL+TY TL+
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKMLEQNLVPDLITYNTLIA 372
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
+ D + ME G P+++
Sbjct: 373 GQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 1/279 (0%)
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
+L+ + Y+ L+S + G ++ L +M Y++ L+ +G EA
Sbjct: 117 KLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQ 176
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
+I G P Y EM +G R +Y L+
Sbjct: 177 YVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF 236
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
A ++++ S + +MK PN Y+ ++ +G +A + +++ E I D
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+Y +I +F L EA L M + G+ PN++T+N+LIK C++ + KA+ L S M
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH-KAMGLLSKM 355
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
EQ L PD + T+I+ G D+ + M G
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESG 394
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 36/244 (14%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ I+ C+ +D A + +M G + SYT LI L + EA L
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLL---- 248
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+M D TY +L+D +G+
Sbjct: 249 -------------------------------VKMKDDNCCPNVRTYTVLIDALCGSGQKS 277
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ + +M G +P+ +Y+ ++ + +A+ +LE + E + + YN++I
Sbjct: 278 EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALI 337
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F K + +A+ L KM ++ + P+++T+N+LI C G+ A L S M+E GL
Sbjct: 338 KGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Query: 320 PDPK 323
P+ +
Sbjct: 397 PNQR 400
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 11/204 (5%)
Query: 319 YPDPKIFVTII-SCLGEQGKWDTIKKCFESMTSRGNK---KYGAVYAVLVDIFGQYGKFQ 374
Y PKI + +I SC + + C +G+ KY ++ +F
Sbjct: 77 YEVPKITILMIKSCNSVRDALFVVDFC--RTMRKGDSFEIKYKLTPKCYNNLLSSLARFG 134
Query: 375 NAEECVQALKSEGV--LVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
EE ++ L +E + LVSP+I F L N Y + G +A + + + G +P+
Sbjct: 135 LVEE-MKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTY 193
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
I A V+ + ++G + V+YT L+ KK DE + +M+
Sbjct: 194 TSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD 253
Query: 491 DGCTPDRKAKQMLQDALTALERRS 514
D C P+ + +L DAL ++S
Sbjct: 254 DNCCPNVRTYTVLIDALCGSGQKS 277
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 140/310 (45%), Gaps = 2/310 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EM G+ T ET+ I + F +A + MK F+ + ++
Sbjct: 220 EMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAK 278
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ K+A + ++++ER + + Y +++ + + L EA +++ M G++P+IV N
Sbjct: 279 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 337
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+++ R + A+ LF M+ +G P+ + + +I +Q +T + F+ M
Sbjct: 338 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G + AVY L+ FG K E ++ ++ +G + AL A Q + E
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
++ M IEP+I NM++ ++ A Y +V+ + + G+ PD +YT L++
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 472 FIRTKKFDEV 481
I K E
Sbjct: 518 LISEGKSREA 527
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 138/333 (41%), Gaps = 2/333 (0%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
G TY ++ + E S + EM KG ++ + + KKA
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKA 248
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
+ E +++ K + N ++D+ G+ EA LF K+ KE PN++T+ L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNG 307
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
CR + +A +++DM + GL PD ++ L K K F M S+G
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 367
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
Y +++ F + + A E + G+ ++ L + Q + ++L+
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M+ +G P+ N LI +N +Y+ + ++ + P + T+ +MK++ +
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 487
Query: 477 KFDEVPIIYKRMETDGCTPDRKAKQMLQDALTA 509
++ ++ M G PD + +L L +
Sbjct: 488 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 124/303 (40%), Gaps = 2/303 (0%)
Query: 108 FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXX 167
F + +YT L+ V EA ++ +MI GLKP + +N+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 353
Query: 168 XXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLY 227
M G +Y I++ F +E ++M G QP++ VY+ ++ +
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 228 RDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNI 287
E+L+E++E+ D YN++I +++ KM + + P+I
Sbjct: 414 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 473
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES 347
T+N ++K + +Y ++ +M ++G+ PD + +I L +GK + E
Sbjct: 474 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 533
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGL 407
M +G K Y F + G+ + EE Q K G + IF A ++
Sbjct: 534 MLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRR-- 591
Query: 408 CEQ 410
C+Q
Sbjct: 592 CKQ 594
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 3/224 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I CK+ +++ A+ M G Q + YT LI G + L KEM
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P YN +M+ + I + T+ +++ + A E
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 490
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +EM KG P+ Y+ ++ G ++A LEE+ ++ + YN
Sbjct: 491 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 260 DTFGKYG--ELGEALKLFVKMQKEGVRPNIVT-WNSLIKWHCRE 300
F + G E+ E L K + I W + + C++
Sbjct: 551 ADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQ 594
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 140/310 (45%), Gaps = 2/310 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EM G+ T ET+ I + F +A + MK F+ + ++
Sbjct: 219 EMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAK 277
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
+ K+A + ++++ER + + Y +++ + + L EA +++ M G++P+IV N
Sbjct: 278 LGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 336
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+++ R + A+ LF M+ +G P+ + + +I +Q +T + F+ M
Sbjct: 337 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G + AVY L+ FG K E ++ ++ +G + AL A Q + E
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
++ M IEP+I NM++ ++ A Y +V+ + + G+ PD +YT L++
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 472 FIRTKKFDEV 481
I K E
Sbjct: 517 LISEGKSREA 526
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 138/333 (41%), Gaps = 2/333 (0%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
G TY ++ + E S + EM KG ++ + + KKA
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKA 247
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
+ E +++ K + N ++D+ G+ EA LF K+ KE PN++T+ L+
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNG 306
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
CR + +A +++DM + GL PD ++ L K K F M S+G
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
Y +++ F + + A E + G+ ++ L + Q + ++L+
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M+ +G P+ N LI +N +Y+ + ++ + P + T+ +MK++ +
Sbjct: 427 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Query: 477 KFDEVPIIYKRMETDGCTPDRKAKQMLQDALTA 509
++ ++ M G PD + +L L +
Sbjct: 487 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 124/303 (40%), Gaps = 2/303 (0%)
Query: 108 FQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXX 167
F + +YT L+ V EA ++ +MI GLKP + +N+
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 168 XXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLY 227
M G +Y I++ F +E ++M G QP++ VY+ ++ +
Sbjct: 353 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Query: 228 RDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNI 287
E+L+E++E+ D YN++I +++ KM + + P+I
Sbjct: 413 GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 472
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES 347
T+N ++K + +Y ++ +M ++G+ PD + +I L +GK + E
Sbjct: 473 HTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 532
Query: 348 MTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGL 407
M +G K Y F + G+ + EE Q K G + IF A ++
Sbjct: 533 MLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRR-- 590
Query: 408 CEQ 410
C+Q
Sbjct: 591 CKQ 593
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 3/224 (1%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I CK+ +++ A+ M G Q + YT LI G + L KEM
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P YN +M+ + I + T+ +++ + A E
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +EM KG P+ Y+ ++ G ++A LEE+ ++ + YN
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549
Query: 260 DTFGKYG--ELGEALKLFVKMQKEGVRPNIVT-WNSLIKWHCRE 300
F + G E+ E L K + I W + + C++
Sbjct: 550 ADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCKQ 593
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 4/373 (1%)
Query: 104 EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGL----KPRLNLYNIXXXXXXX 159
+++G + S Y ++EA +G + LF+E L K ++Y I
Sbjct: 201 QSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAK 260
Query: 160 XXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFV 219
EM D GI + E Y +L+ F A + T E K + +
Sbjct: 261 SGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEM 320
Query: 220 YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ 279
K+V +Y G + EV+ +R+ ++ + I +I++ F K EA+K++
Sbjct: 321 CLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAM 380
Query: 280 KEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWD 339
KE VT+ I +CR Y KA LF +M ++G + I+ G+ +
Sbjct: 381 KEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLS 440
Query: 340 TIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALA 399
+ M RG K +Y L+D+ G+ + AE+ + +K VL + ++
Sbjct: 441 DAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMI 500
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+AY + E+ +++ Q + + M +++ FS R E M + +K G
Sbjct: 501 SAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTR 560
Query: 460 PDLVTYTTLMKAF 472
D Y++ + A
Sbjct: 561 LDARLYSSALNAL 573
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 132/337 (39%), Gaps = 36/337 (10%)
Query: 115 YTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV 174
YT + +L GR EA + +EM G+ LY++ E
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM--------------------KMKGF- 213
+ + E ++ +V G +E T + M K +GF
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 370
Query: 214 --------------QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ Y+ + Y + KA + +E+ ++ Y++I+
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D +GK L +A++L KM++ G +PNI +NSLI H R D +A ++ +M+ +
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 490
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD + ++IS + + + ++ K A+ ++V +F + +
Sbjct: 491 PDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRL 550
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
+Q +K EG + ++ + NA GL Q I+ LQ
Sbjct: 551 LQDMKVEGTRLDARLYSSALNALRDAGLNSQ-IRWLQ 586
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 119/290 (41%), Gaps = 4/290 (1%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL----DTHIYNSIIDTFGKYGE 267
G +P+ Y +I+ + G K E+ +E + +++S IY + + K G
Sbjct: 204 GVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGR 263
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
EAL++ +M+ +G+ + ++ LI+ + LF + + L DP++ +
Sbjct: 264 AFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLK 323
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
++ +G +T + +M K + +V+ F + F A + + E
Sbjct: 324 VVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 383
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
+ NAY + +A + M +G + +V + +++ + R +A+
Sbjct: 384 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR 497
+ +K+ G P++ Y +L+ R I+K M+ PD+
Sbjct: 444 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDK 493
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/426 (19%), Positives = 172/426 (40%), Gaps = 10/426 (2%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ ++I + L+ A +L M G + LIE+ G G E+ +F++M
Sbjct: 153 HMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK 212
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G++ + YN +MV G+ TR TY ++L F + RLE
Sbjct: 213 DLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLE 272
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+MK +G P+ ++ ++ + +A ++ E++ KI Y ++I
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + + L++F +M+ G+ PN T+++L+ C G +A N+ +M + +
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 320 P-DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P D IF+ ++ + G + ++M + Y VL++ + + A +
Sbjct: 393 PKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIK 452
Query: 379 CVQALKSEGVLV--------SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
+ L + +++ P+ + + G +A + + + G++ L
Sbjct: 453 LLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDA-L 511
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
N LI + G + + + GV + Y L+K+++ + + M
Sbjct: 512 NNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVE 571
Query: 491 DGCTPD 496
DG PD
Sbjct: 572 DGHVPD 577
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 128/300 (42%), Gaps = 8/300 (2%)
Query: 176 SGIWR-TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
SG+ R R+T+ ++ +L + +M KG + ++ ++ Y G+ +
Sbjct: 143 SGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQ 202
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
++ ++ +++++ + YNS+ + G A + F KM EGV P T+N ++
Sbjct: 203 ESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLML 262
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
AL F DM+ +G+ PD F T+I+ K D +K F M +GNK
Sbjct: 263 WGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM--KGNK 320
Query: 355 KYGAV--YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
+V Y ++ + + + + ++S G+ + + L G +A
Sbjct: 321 IGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAK 380
Query: 413 KVLQIMEGEGIEP--NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
+L+ M + I P N + L +L++ S AG A V + V + Y L++
Sbjct: 381 NILKNMMAKHIAPKDNSIFLKLLVSQ-SKAGDMAAATEVLKAMATLNVPAEAGHYGVLIE 439
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 163/410 (39%), Gaps = 27/410 (6%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I +D + + +M + G + ++ +Y+ L+ L + G+ EA + K M+
Sbjct: 328 YTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMM 387
Query: 140 YCGLKPRLN-LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD------YF 192
+ P+ N ++ M + Y +L++ +
Sbjct: 388 AKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAY 447
Query: 193 VSAGRLEDTWS----TINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKI 248
A +L DT + +P++ Y+ I+ +NG KA + ++ +R +
Sbjct: 448 NRAIKLLDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGV 505
Query: 249 SLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALN 308
D N++I K G + ++ M + GV + LIK + +G+ A
Sbjct: 506 Q-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKT 564
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR--GNKKYGAVYAVLVDI 366
M E G PD +F ++I L E G+ T + M + G + + A +++
Sbjct: 565 ALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEA 624
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
G + A + L G +L + +++G A+K+L G+E +
Sbjct: 625 LLMRGHVEEALGRIDLLNQNGHTAD---LDSLLSVLSEKGKTIAALKLLDF----GLERD 677
Query: 427 IVM----LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ + + +++A AG+ + A SV I E G S D + L+K+
Sbjct: 678 LSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSL 727
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 133/325 (40%), Gaps = 34/325 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQM--------EALGFQLSSYSYTHLIEALGNVGRTSEA 131
Y LI CK +RA+ LL + ++ +Y +IE L N G+T++A
Sbjct: 434 YGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKA 493
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
++LF++++ G++ + L N+ M G+ R YE+L+
Sbjct: 494 EVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKI-MSRRGVPRESNAYELLIKS 552
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
++S G D + ++ M G P+S ++ ++ ++G + A+ V+ + ++ + ++
Sbjct: 553 YMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIE 612
Query: 252 TH--IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
+ + I++ G + EAL + + G + +SL+ +G AL L
Sbjct: 613 DNMDLIAKILEALLMRGHVEEALGRIDLLNQNG---HTADLDSLLSVLSEKGKTIAALKL 669
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGK-------------------WDTIKKCFESMTS 350
E+ L + + ++ L GK W + + +S+
Sbjct: 670 LDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQ 729
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQN 375
GN K V + ++ GQ K QN
Sbjct: 730 EGNTKQADVLSRMIKK-GQGIKKQN 753
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 175/410 (42%), Gaps = 28/410 (6%)
Query: 118 LIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSG 177
+I+ G G ++ ++++++ +KP N+Y I M
Sbjct: 273 MIDVCGLCGDYVKSRYIYEDLLKENIKP--NIYVINSLMNVNSHDLGYTLKVYKNMQILD 330
Query: 178 IWRTRETYEILLDYFVSAGRLE---DTWSTINEMKMKGF-QPNSFVYSKIVGLYRDNGMW 233
+ +Y ILL AGR++ D + M+ G + ++F Y I+ ++ D MW
Sbjct: 331 VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMW 390
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
K A +V ++++ ++ +TH ++S+I G + +A LF +M G PN +N L
Sbjct: 391 KWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL 450
Query: 294 IKWHCREGDYTKALNLFSDMQ----EQGLYPD---PKIFVTIISCLGEQGKWDTIKKCFE 346
+ Y +A LF + + LY D K + + L G + +
Sbjct: 451 LHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSN 510
Query: 347 SMTSRGNKKY-----GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN--IFCALA 399
S + +K++ A Y +L+ G + +E + +KS G +SPN + L
Sbjct: 511 SPYIQASKRFCFKPTTATYNILLKACGT--DYYRGKELMDEMKSLG--LSPNQITWSTLI 566
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+ G E A+++L+ M G P++V I + A S++ ++ +
Sbjct: 567 DMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIK 626
Query: 460 PDLVTYTTLMKAFIRTKKFDEVP---IIYKRMETDGCTP-DRKAKQMLQD 505
P+ VTY TL+KA + EV IY+ M G P D K+++++
Sbjct: 627 PNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEE 676
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 132/288 (45%), Gaps = 1/288 (0%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
GF +Y+ ++ + + E++ E+ + D + +I +GK ++G+
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
L +F KM+K G + +N +I+ C G AL + +M E+G+ + + ++ C
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
+ + K D ++ + M + L+ F GK + A E ++ LK++ + +
Sbjct: 304 IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 363
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH 451
F L + A++++ IM+ ++ + V ++I+ + +A+ +
Sbjct: 364 AKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFE 422
Query: 452 HIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
IK+SG P + TYT +M+ + K+F++ ++ M +G PD A
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 149/328 (45%), Gaps = 3/328 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LIS K + + + + +M GF+L + +Y +I +L GR A +KEM+
Sbjct: 227 WTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMM 286
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+ L Y + +MV + + LL F +G+++
Sbjct: 287 EKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIK 346
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ I E+K K ++ + +V GL R N M A E+++ ++ RK+ D+++Y I
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD-ALEIVDIMKRRKLD-DSNVYGII 404
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
I + + ++ +AL+ F ++K G P + T+ +++ + + K NLF++M E G+
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
PD +++ Q + K F SM +G K Y++ V + ++ +
Sbjct: 465 EPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIK 524
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQG 406
+ + +++ +IF + ++ + G
Sbjct: 525 IFNQMHASKIVIRDDIFSWVISSMEKNG 552
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 136/326 (41%), Gaps = 42/326 (12%)
Query: 209 KMKGFQPNSFVYS---KIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKY 265
K G++ NS Y+ K+ G +D +K+ + E+R + + + +I +G+
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGKD---FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRT 726
Query: 266 GELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG--DYTKALNLFSDMQEQGLYPDPK 323
G A++ F +M+ G+ P+ T+ LI C + + +A F +M G PD +
Sbjct: 727 GLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRE 786
Query: 324 IFVTIISCLGEQGKWDTIKKCFESMTS-------------RGNKKYGAV----------- 359
+ + CL E G K C +S+ R + G +
Sbjct: 787 LVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFE 846
Query: 360 ----------YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
Y +V Q G Q A + V ++K G +++ +L + ++ E
Sbjct: 847 GERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLE 906
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+ ++ Q MEGE EP++V +I + + G+ EA + + +++E G SPD TY+ +
Sbjct: 907 KVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTP 495
+ K ++ + M G P
Sbjct: 967 NCLCQACKSEDALKLLSEMLDKGIAP 992
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 3/288 (1%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEAL-GNV 125
E R G ++ + ++ +I + + G + A+ +M+ +G SS ++ LI L
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 126 GR-TSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRET 184
GR EA F+EMI G P L + G T
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTV-A 821
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR 244
Y I + G+LE+ S + + + + + Y IV G +KA + + ++
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
Query: 245 ERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
E H+Y S+I F K +L + L+ KM+ E P++VT+ ++I + G
Sbjct: 882 EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVE 941
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
+A N F +M+E+G PD K + I+CL + K + K M +G
Sbjct: 942 EAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKG 989
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 139/351 (39%), Gaps = 9/351 (2%)
Query: 142 GLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDT 201
G R+ +YN EM +G + T+ IL+ + A ++
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 202 WSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDT 261
+M+ GF+ ++ Y+ ++ G A E +E+ E+ I+ Y ++D
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 262 FGKYGELGEALKLFVKMQKEGVRPNIVT----WNSLIKWHCREGDYTKALNLFSDMQEQG 317
K E + + + + VR ++ + L+K C G +AL L +++ +
Sbjct: 304 IAK----SEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKE 359
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
+ D K F ++ L + + + M R VY +++ + + A
Sbjct: 360 MCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDD-SNVYGIIISGYLRQNDVSKAL 418
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
E + +K G + + + + E+ + M GIEP+ V + ++
Sbjct: 419 EQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGH 478
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
R EA V+ ++E G+ P +Y+ +K R+ ++DE+ I+ +M
Sbjct: 479 LGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 126/323 (39%), Gaps = 3/323 (0%)
Query: 68 APRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGR 127
R G + +SE Y+ I + + SL +M G ++ ++ +I G G
Sbjct: 669 GKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGL 728
Query: 128 TSEADMLFKEMIYCGLKPRLNLYN--IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETY 185
T+ A FKEM GL P + + I EM+ SG RE
Sbjct: 729 TNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELV 788
Query: 186 EILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE 245
+ L G +D S ++ + GF P + YS + G ++A L
Sbjct: 789 QDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEG 847
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
+ LD + Y SI+ + G+L +AL M++ G +P + + SLI + +E K
Sbjct: 848 ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEK 907
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD 365
L M+ + P + +I GK + F +M RG Y+ ++
Sbjct: 908 VLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
Query: 366 IFGQYGKFQNAEECVQALKSEGV 388
Q K ++A + + + +G+
Sbjct: 968 CLCQACKSEDALKLLSEMLDKGI 990
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/380 (18%), Positives = 155/380 (40%), Gaps = 36/380 (9%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ ++S + NLD L+++ME G ++T LI G + + ++F++M
Sbjct: 191 IYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM 250
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
G + YNI EM++ GI TY++LLD + ++
Sbjct: 251 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV 310
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+ S ++M + ++ + +G K+A E++ E++ +++ LD + +
Sbjct: 311 DVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEIL 370
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ + + +AL++ M++ + + V + +I + R+ D +KAL F +++ G
Sbjct: 371 VKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGR 429
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P + I+ L + +++ F M G
Sbjct: 430 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENG-------------------------- 463
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
++ + V ++ A+ + Q +A KV ME +GI+P ++ +
Sbjct: 464 ----IEPDSVAIT-----AVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC 514
Query: 439 NAGRYMEAMSVYHHIKESGV 458
+ RY E + +++ + S +
Sbjct: 515 RSSRYDEIIKIFNQMHASKI 534
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 124/318 (38%), Gaps = 3/318 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLY--RD 229
EM G T++T+ I++ + G T EMK G P+S + ++ + +
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
++AT E+ D + + + G +A + K G P V
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVA 821
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
++ I+ CR G +AL+ + + + D + +I+ L ++G SM
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
G K VY L+ F + + + E Q ++ E S + A+ Y G E
Sbjct: 882 EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVE 941
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A + ME G P+ + IN A + +A+ + + + G++P + + T+
Sbjct: 942 EAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVF 1001
Query: 470 KAFIRTKKFDEVPIIYKR 487
R K D I ++
Sbjct: 1002 YGLNREGKHDLARIALQK 1019
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 40/269 (14%)
Query: 71 PGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSE 130
P EL ++ L C+ GN A S L + +GF ++ +Y+ I AL +G+ E
Sbjct: 783 PDRELVQDYLGCL----CEVGNTKDAKSCLDSLGKIGFPVT-VAYSIYIRALCRIGKLEE 837
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
A L + + G + L+ Y TY ++
Sbjct: 838 A--LSELASFEGERSLLDQY---------------------------------TYGSIVH 862
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
+ G L+ +N MK G +P VY+ ++ + +K E +++
Sbjct: 863 GLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEP 922
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
Y ++I + G++ EA F M++ G P+ T++ I C+ AL L
Sbjct: 923 SVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLL 982
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWD 339
S+M ++G+ P F T+ L +GK D
Sbjct: 983 SEMLDKGIAPSTINFRTVFYGLNREGKHD 1011
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 4/254 (1%)
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
A V+ ++ + I D ++Y++II+ K + +A+ +F KM K+ R N V +S+++
Sbjct: 310 AESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQ 369
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
+C+ G++++A +LF + +E + D + LG+ GK + + F MT +G
Sbjct: 370 CYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAP 429
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
Y L+ GK +A + + + G I+ LA A GL ++A + L
Sbjct: 430 DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETL 489
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
++ME G++P V NM+I +AG +A + Y ++ D +++K F
Sbjct: 490 KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAA 545
Query: 476 KKFDEVPIIYKRME 489
D + R+E
Sbjct: 546 GCLDHAFERFIRLE 559
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 172/414 (41%), Gaps = 16/414 (3%)
Query: 89 KEGNLDRAMSLLAQMEALG-----FQLSSYSYTHLIEALGNVGRTSEA-DMLFKEMIYCG 142
+ G+ R S++ ++A+G L T L++A N+ EA D+ F+ G
Sbjct: 118 RRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLG 177
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTW 202
P + N E+ G+ TY +++ E+
Sbjct: 178 RAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELE 237
Query: 203 STINEMKMKGFQ-PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH----IYNS 257
++ + + + P F + I GL N M A +L+ +R+ I +D Y
Sbjct: 238 KLLSRLLISETRNPCVFYLNFIEGLCL-NQMTDIAYFLLQPLRDANILVDKSDLGIAYRK 296
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
++ + +A + + M+K G+ P++ ++++I+ H + + KA+++F+ M ++
Sbjct: 297 VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKR 356
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
+ I +I+ C + G + F+ Y V D G+ GK + A
Sbjct: 357 KRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAI 416
Query: 378 ECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
E + + +G+ +P++ + L QG C A ++ M+G G P+IV+ N+L
Sbjct: 417 ELFREMTGKGI--APDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAG 474
Query: 436 AFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+ G EA ++ GV P VT+ +++ I + D+ Y+ +E
Sbjct: 475 GLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 168/417 (40%), Gaps = 20/417 (4%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI CC +G A L+ +M+ G Y L L G EA K M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G+KP +N+ +S ++RE ++ F +AG L+
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEA----FYESLEHKSRENDASMVKGFCAAGCLD 549
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ ++++ P S ++ L + KA ++L+ + + + + +Y +I
Sbjct: 550 HAFERF--IRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLI 607
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ + + +A + F + + + P++ T+ +I +CR + +A LF DM+ + +
Sbjct: 608 GAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVK 667
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
PD VT L + D +K+ E+ + Y Y ++++ + +
Sbjct: 668 PD---VVTYSVLLNSDPELD-MKREMEAFDVIPDVVY---YTIMINRYCHLNDLKKVYAL 720
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ +K ++ + L ++ L + M+ ++P++ +LI+
Sbjct: 721 FKDMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFDVKPDVFYYTVLIDWQCK 773
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G EA ++ + ESGV PD YT L+ + E +I+ RM G PD
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 175/450 (38%), Gaps = 44/450 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y +++ C E ++ A S++ ME G Y Y+ +IE +A +F +M+
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 140 YCGLKPRLNLYNIXXXXXX--XXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
+ R+N + E ++ I R Y + D G+
Sbjct: 354 --KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+E+ EM KG P+ Y+ ++G G A +++ E+ + D IYN
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+ G EA + M+ GV+P VT N +I+ G+ KA + ++ +
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 318 L---------------------------YPDPK-IFVTIISCL-GEQGKWDTIKKCFESM 348
+P PK ++ T+ + L E+ + + M
Sbjct: 532 RENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRM 591
Query: 349 TSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC 408
G + ++Y L+ + + + A E + L ++ ++ + + N Y +
Sbjct: 592 WKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEP 651
Query: 409 EQAIKVLQIMEGEGIEPNIVMLNMLINAFS--NAGRYMEAMSVYHHIKESGVSPDLVTYT 466
+QA + + M+ ++P++V ++L+N+ + R MEA V PD+V YT
Sbjct: 652 KQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVI---------PDVVYYT 702
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
++ + +V ++K M+ PD
Sbjct: 703 IMINRYCHLNDLKKVYALFKDMKRREIVPD 732
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 126/326 (38%), Gaps = 18/326 (5%)
Query: 63 FPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEAL 122
F E P P S +++ S C ++ + +A LL +M LG + Y LI A
Sbjct: 555 FIRLEFPLP----KSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAW 610
Query: 123 GNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTR 182
V +A F+ ++ + P L Y I +M +
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV 670
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
TY +LL+ + EM+ P+ Y+ ++ Y KK + ++
Sbjct: 671 VTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKD 723
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
++ R+I D Y ++ + L +K F V+P++ + LI W C+ GD
Sbjct: 724 MKRREIVPDVVTYTVLLKNKPERN-LSREMKAF------DVKPDVFYYTVLIDWQCKIGD 776
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
+A +F M E G+ PD + +I+C + G K F+ M G K Y
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTA 836
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGV 388
L+ + G A + V+ + +G+
Sbjct: 837 LIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 113/283 (39%), Gaps = 14/283 (4%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E Y +LI C+ N+ +A + ++YT +I + +A
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
LF++M +KP + Y++ EM + Y I+++
Sbjct: 655 YALFEDMKRRDVKPDVVTYSVLLNSDPELDMKR-------EMEAFDVIPDVVYYTIMINR 707
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+ L+ ++ +MK + P+ Y+ ++ K + E++ + D
Sbjct: 708 YCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-------NKPERNLSREMKAFDVKPD 760
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
Y +ID K G+LGEA ++F +M + GV P+ + +LI C+ G +A +F
Sbjct: 761 VFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFD 820
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
M E G+ PD + +I+ G K + M +G K
Sbjct: 821 RMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/313 (18%), Positives = 114/313 (36%), Gaps = 48/313 (15%)
Query: 229 DNGMWKKATEVLEEI--RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE-GVRP 285
D G ++L+ I E+ + L + +++ + EA+ +F + G P
Sbjct: 121 DEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAP 180
Query: 286 NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF 345
+I N LI G + F +++ GL D +V ++ L + ++K
Sbjct: 181 DIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLL 240
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ- 404
+ + Y ++ A +Q L+ +LV + L AY +
Sbjct: 241 SRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKS---DLGIAYRKV 297
Query: 405 -QGLC-----EQAIKVLQIMEGEGIEPNI------------------------------- 427
+GLC E A V+ ME GI+P++
Sbjct: 298 VRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK 357
Query: 428 ----VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
V+++ ++ + G + EA ++ +E+ +S D V Y A + K +E
Sbjct: 358 RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 484 IYKRMETDGCTPD 496
+++ M G PD
Sbjct: 418 LFREMTGKGIAPD 430
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 6/298 (2%)
Query: 220 YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ 279
++ ++ +Y DNG + + EV E ++ ++ +D + + ++ A F M
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 280 KEGVRPNIVTWNSL---IKWHCREGDYTKALNLFSDM-QEQGLYPDPKIFVTIISCLGEQ 335
+ G+ ++VT SL + C G+ T+A L +M +G+ + F ++I C ++
Sbjct: 202 ESGI--DVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKR 259
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
++ + + M Y VL+D F YGK + AE V + + + V ++
Sbjct: 260 WDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLY 319
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
+ N Y++ GL E+ I++ M G+ PN +L+N AG+ EAMS + ++
Sbjct: 320 NLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRV 379
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALERR 513
+ D Y+TL + R D+ + M DG P + L D+L + R+
Sbjct: 380 NEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRK 437
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Query: 173 MVDSGI-WRTRETYEILLDYFVSAGRLEDTWSTINEMKM-KGFQPNSFVYSKIVGLYRDN 230
MV+SGI T + +++ G + + EM + KG + N + ++G
Sbjct: 200 MVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKR 259
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
+++ VL+ + + + LD Y +ID F YG++ EA +L + M + +R +
Sbjct: 260 WDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLY 319
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
N ++ + R G K + L+S+M +G+ P+ + +++ L + GK
Sbjct: 320 NLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 1/206 (0%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+ +I C K + + +L ME L SY LI+ + G+ EA+ L M
Sbjct: 249 FKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMH 308
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
L+ LYN+ EM G+ ++TY +L++ AG++
Sbjct: 309 DKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVC 368
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ S +NE+++ F+ + +YS + GM K+ EV+ E+ I +
Sbjct: 369 EAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLA 428
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRP 285
D+ + EA L + K G++P
Sbjct: 429 DSLFEVNR-KEAQMLITIVVKCGIKP 453
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 129/312 (41%), Gaps = 25/312 (8%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ L+ + R D N+M G+ PN F S ++ ++
Sbjct: 128 TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 187
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ + H+ ++++D + +YG + +A +F ++ N V+WN+LI H R
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGT 243
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLG-----EQGKWDTIKKCFESMTSRGNKKYGA 358
KAL LF M G P + ++ EQGKW M G K
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW-----VHAYMIKSGEKLVAF 298
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
L+D++ + G +A + L V VS N +L AYAQ G ++A+ + M
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDV-VSWN---SLLTAYAQHGFGKEAVWWFEEM 354
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT--- 475
GI PN + ++ A S++G E Y +K+ G+ P+ Y T++ R
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 476 ----KKFDEVPI 483
+ +E+PI
Sbjct: 415 NRALRFIEEMPI 426
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 14/254 (5%)
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
M GF+P+ F Y+ + G G ++ V + + L N+++D + K G
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
+ +A K+F ++ K ++V+WNSL+ + + G +A+ F +M+ G+ P+ F++
Sbjct: 313 IHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLS 368
Query: 328 IISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+++ G D +E M G Y +VD+ G+ G A ++ + E
Sbjct: 369 VLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 388 VLVSPNIFCALANA---YAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYM 444
+ I+ AL NA + L A + + ++ + P++++ N+ +++ GR+
Sbjct: 429 ---TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI----YASGGRWN 481
Query: 445 EAMSVYHHIKESGV 458
+A V +KESGV
Sbjct: 482 DAARVRKKMKESGV 495
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N++++ + K G L EA K+F KM + + VTW +LI + + AL F+ M
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 316 QGLYPDPKIFVTII--------SCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
G P+ ++I C G Q +K F+S G + L+D++
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG--------SALLDLY 206
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+YG +A+ AL+S VS N AL +A++ E+A+++ Q M +G P+
Sbjct: 207 TRYGLMDDAQLVFDALESRND-VSWN---ALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
L A S+ G + V+ ++ +SG TL+ + ++ + I+ R
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 488 M 488
+
Sbjct: 323 L 323
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
M+ G + +Y L S G LE M G + +F + ++ +Y +G
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
A ++ + + +R D +NS++ + ++G EA+ F +M++ G+RPN +++ S
Sbjct: 313 IHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLS 368
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
++ G + + + M++ G+ P+ +VT++ LG G + + E M
Sbjct: 369 VLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI-- 426
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV----SPNIFCALANAYAQQGLC 408
+ A++ L++ + +N E + A +E V P L N YA G
Sbjct: 427 -EPTAAIWKALLNACRMH---KNTE--LGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480
Query: 409 EQAIKVLQIMEGEGIE 424
A +V + M+ G++
Sbjct: 481 NDAARVRKKMKESGVK 496
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 107/277 (38%), Gaps = 10/277 (3%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ LI+ + ++A+ L M GF+ S +SY L A + G + + MI
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G K L ++ D R ++ LL + G +
Sbjct: 290 KSGEK----LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGK 345
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ EM+ G +PN + ++ +G+ + E +++ I + Y +++
Sbjct: 346 EAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVV 405
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D G+ G+L AL+ +M + P W +L+ CR T+ L ++ L
Sbjct: 406 DLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLN-ACRMHKNTE-LGAYAAEHVFELD 460
Query: 320 P-DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
P DP V + + G+W+ + + M G KK
Sbjct: 461 PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 142/334 (42%), Gaps = 3/334 (0%)
Query: 182 RETYEILLDYFVSA--GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R T+ ILL + A + + +N M G +P+ V + G +A ++
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE-GVRPNIVTWNSLIKWHC 298
++E+ E+ DT+ YN ++ K +L + +M+ + V+P++V++ LI C
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 299 REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
+ +A+ L S + G PD ++ TI+ K ++ M G +
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
Y L+ + G+ + A ++ + G + +L N ++G A+ +L+ M
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM 361
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF 478
E G PN N L++ A + M +Y +K SGV + Y TL+++ +++ K
Sbjct: 362 EARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKV 421
Query: 479 DEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
E ++ D A L+ L L++
Sbjct: 422 AEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKK 455
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 152/363 (41%), Gaps = 25/363 (6%)
Query: 70 RPGEELSSEFYSQLISKCCKE-----GNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGN 124
RPG + L+S C+ N+ R ++L+ G + + + +L
Sbjct: 119 RPGRST----FLILLSHACRAPDSSISNVHRVLNLMVNN---GLEPDQVTTDIAVRSLCE 171
Query: 125 VGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS-GIWRTRE 183
GR EA L KE+ P YN EM D +
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV 231
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++ IL+D ++ L + ++++ GF+P+ F+Y+ I+ + +A V +++
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+E + D YN++I K G + EA M G P+ T+ SL+ CR+G+
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
AL+L +M+ +G P+ + T++ L + D + +E M S G K YA L
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 364 VDIFGQYGKFQNAEECVQ-ALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
V + GK A E A+ S+ +L++A A L E +K L+ + +G
Sbjct: 412 VRSLVKSGKVAEAYEVFDYAVDSK----------SLSDASAYSTL-ETTLKWLKKAKEQG 460
Query: 423 IEP 425
+ P
Sbjct: 461 LVP 463
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 142/303 (46%), Gaps = 3/303 (0%)
Query: 172 EMVDS-GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDN 230
E++DS G + + +EIL+ R + +MK GF+P F+Y++I+ N
Sbjct: 182 ELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKN 241
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
G + A V E+ +E + ++ + ++ K G + E L++ +M++ +P++ +
Sbjct: 242 GYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAY 301
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
++IK EG+ +L ++ +M+ + PD + T++ L + G+ + + F M
Sbjct: 302 TAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKG 361
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
+ +Y VL++ F GK ++A + L G + I+ A+ ++
Sbjct: 362 KQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDK 421
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG--VSPDLVTYTTL 468
A K+ Q+ E +EP+ L+ ++ A+ R + +V I E G VS L + L
Sbjct: 422 AYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKL 481
Query: 469 MKA 471
+ A
Sbjct: 482 LCA 484
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 172/425 (40%), Gaps = 7/425 (1%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
+ G+ A L M++ G S + LI + R ++++M G KPR+
Sbjct: 170 RNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVF 229
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
LYN + + G+ T+ IL+ AGR+E+ + M
Sbjct: 230 LYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRM 289
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+ +P+ F Y+ ++ G + V +E+R +I D Y +++ K G +
Sbjct: 290 RENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRV 349
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
+LF++M+ + + + + LI+ +G A NL+ D+ + G D I+ +
Sbjct: 350 ERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAV 409
Query: 329 ISCLGEQGKWDTIKKCFE-SMTSRGNKKYGAVYAVLVD--IFGQYGKFQNAEECVQALKS 385
I L + D K F+ ++ + + ++V + + F N E + L
Sbjct: 410 IKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL-- 467
Query: 386 EGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYME 445
G VS + A + A+ V I++ +G ++ + N+L+ A G +
Sbjct: 468 -GYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQK 525
Query: 446 AMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
++S+++ +++ G PD +Y+ + F+ ++++ C P A L
Sbjct: 526 SLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTK 585
Query: 506 ALTAL 510
L +
Sbjct: 586 GLCQI 590
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 159/416 (38%), Gaps = 52/416 (12%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y++++ K G D A+++ + G S ++ L++ L GR E + + M
Sbjct: 230 LYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRM 289
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
KP + Y ++ VS G L
Sbjct: 290 RENLCKPDVF-----------------------------------AYTAMIKTLVSEGNL 314
Query: 199 EDTWSTINEMKMKGFQPNSFVYSK-IVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+ + +EM+ +P+ Y +VGL +D G ++ E+ E++ ++I +D IY
Sbjct: 315 DASLRVWDEMRRDEIKPDVMAYGTLVVGLCKD-GRVERGYELFMEMKGKQILIDREIYRV 373
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+I+ F G++ A L+ + G +I +N++IK C KA LF E+
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
L PD + I+ + E + G Y V D Q+ K A+
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG-------YPV-SDYLTQFFKLLCAD 485
Query: 378 ECVQALKSEGVLV-------SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
E A+ + + S +++ L A + G ++++ + M G EP+
Sbjct: 486 EEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSY 545
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
++ I F G A S + I E P + Y +L K + + D V ++ +
Sbjct: 546 SIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVR 601
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 140/343 (40%), Gaps = 14/343 (4%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y L+ CK+G ++R L +M+ + Y LIE G+ A L+++++
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLV 395
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G + +YN ++ + ET ++ +V RL
Sbjct: 396 DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS 455
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + + + G+ + ++ L D A +V I + K +YN ++
Sbjct: 456 DFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFY-ILKTKGHGSVSVYNILM 514
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ K G++ ++L LF +M+K G P+ +++ I +GD A + + E
Sbjct: 515 EALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCV 574
Query: 320 PDPKIFVTIISCLGEQGKWDT----IKKCFESMTSRGNKKYGAV---YAVLVDIFGQYGK 372
P ++++ L + G+ D +++C GN + G + YA+ V +
Sbjct: 575 PSIAAYLSLTKGLCQIGEIDAVMLLVRECL------GNVESGPMEFKYALTVCHVCKGSN 628
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
+ + V + EGV ++ I+CA+ + ++ G + A +V
Sbjct: 629 AEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVF 671
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 175/443 (39%), Gaps = 51/443 (11%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG 142
L+ CK G ++ + +L +M + ++YT +I+ L + G + ++ EM
Sbjct: 269 LVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTW 202
+KP + Y EM I RE Y +L++ FV+ G++
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
Query: 203 STINEMKMKGFQPNSFVYSKIV-GLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII-- 259
+ ++ G+ + +Y+ ++ GL N + KA ++ + E ++ D + I+
Sbjct: 389 NLWEDLVDSGYIADIGIYNAVIKGLCSVNQV-DKAYKLFQVAIEEELEPDFETLSPIMVA 447
Query: 260 -----------DTFGKYGELG----------------------EALKLFVKMQKEGVRPN 286
+ + GELG AL +F ++ +G +
Sbjct: 448 YVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGS 506
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
+ +N L++ + GD K+L+LF +M++ G PD + I C E+G E
Sbjct: 507 VSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHE 566
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQN----AEECVQALKSEGVLVSPNIF-CALANA 401
+ A Y L Q G+ EC+ ++S P F AL
Sbjct: 567 KIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVES-----GPMEFKYALTVC 621
Query: 402 YAQQGL-CEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV-- 458
+ +G E+ +KV+ M EG+ N V+ +I+ S G A V+ +K+ V
Sbjct: 622 HVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMT 681
Query: 459 SPDLVTYTTLMKAFIRTKKFDEV 481
D+V Y ++ + K D V
Sbjct: 682 EADMVVYEEMLIEQTKKKTADLV 704
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 95/231 (41%)
Query: 279 QKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKW 338
+++G + + +N+ R G + A L M QG P K F +I + +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 339 DTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCAL 398
+ +E M G K +Y ++D + G F A + K +G++ F L
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 399 ANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
+ G E+ +++LQ M +P++ +I + G ++ V+ ++ +
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTA 509
PD++ Y TL+ + + + ++ M+ DR+ ++L + A
Sbjct: 330 KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVA 380
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/306 (16%), Positives = 121/306 (39%)
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
K KG++ + Y+ NG ++ A ++ E + + + +I
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
++ KM+K G +P + +N ++ + G + AL ++ D +E GL + F+ +
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
+ L + G+ + + + + M K Y ++ G + ++ + +
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMS 448
+ L + G E+ ++ M+G+ I + + +LI F G+ A +
Sbjct: 330 KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACN 389
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
++ + +SG D+ Y ++K + D+ +++ + PD + + A
Sbjct: 390 LWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYV 449
Query: 509 ALERRS 514
+ R S
Sbjct: 450 VMNRLS 455
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 127/308 (41%), Gaps = 36/308 (11%)
Query: 82 QLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYC 141
QL+ C + +++ A + + G S+ +Y+ L+ + S A +F EM+
Sbjct: 178 QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLER 237
Query: 142 GLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDT 201
L YN LLD +G ++
Sbjct: 238 NCVVDLLAYNA-----------------------------------LLDALCKSGDVDGG 262
Query: 202 WSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDT 261
+ EM G +P+++ ++ + Y D G A +VL+ ++ + + + +N II T
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 262 FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPD 321
K ++ +A L +M ++G P+ T+NS++ +HC + +A L S M PD
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 322 PKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVD-IFGQYGKFQNAEECV 380
+ ++ L G++D + +E M+ R A Y V++ + + GK + A
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYF 442
Query: 381 QALKSEGV 388
+ + EG+
Sbjct: 443 EMMIDEGI 450
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 170/461 (36%), Gaps = 48/461 (10%)
Query: 53 NSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSS 112
N + D + TL +PR +SS Q++ +C G L A+ F S
Sbjct: 50 NPKDDLEHTLVAY--SPR----VSSNLVEQVLKRCKNLGFPAHRFFLWAR-RIPDFAHSL 102
Query: 113 YSYTHLIEALGNVGRTSEA-DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXX 171
SY L+E LG+ + + D L + Y + ++ I
Sbjct: 103 ESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFN 162
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
MV+ GI + + LL + + K G P++ YS +V +
Sbjct: 163 RMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIR 222
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
A +V +E+ ER +D YN+++D K G++ K+F +M G++P+ ++
Sbjct: 223 DASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFA 282
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
I +C GD A + M+ L P+ F II L + K D + M +
Sbjct: 283 IFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQK 342
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE-- 409
G Y ++ A C CE
Sbjct: 343 GANPDTWTYNSIM-----------AYHCDH--------------------------CEVN 365
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A K+L M+ P+ NM++ GR+ A ++ + E P + TYT ++
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Query: 470 KAFIRTK-KFDEVPIIYKRMETDGCTPDRKAKQMLQDALTA 509
+R K K +E ++ M +G P +ML++ L
Sbjct: 426 HGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVG 466
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 105/276 (38%), Gaps = 1/276 (0%)
Query: 238 EVLEEIRERK-ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
+ L E RE + + ++ + + + EA + F +M + G++P + + L+
Sbjct: 123 DFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHS 182
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
C + A F + G+ P K + ++ +K F+ M R
Sbjct: 183 LCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVD 242
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
Y L+D + G + Q + + G+ F +AY G A KVL
Sbjct: 243 LLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLD 302
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M+ + PN+ N +I + +A + + + G +PD TY ++M
Sbjct: 303 RMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHC 362
Query: 477 KFDEVPIIYKRMETDGCTPDRKAKQMLQDALTALER 512
+ + + RM+ C PDR M+ L + R
Sbjct: 363 EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 174/412 (42%), Gaps = 29/412 (7%)
Query: 84 ISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGL 143
+ +C K+ L + + A+M G SY+ T + + TS + + ++++ G
Sbjct: 21 LQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFC--ISSTSSDFLPYAQIVFDGF 75
Query: 144 -KPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTW 202
+P L+N+ M+ S T+ LL + E+T
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 203 STINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTF 262
++ G++ + + + ++ Y G +K A + + I E D +NS+I +
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP----DDVSWNSVIKGY 191
Query: 263 GKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDP 322
K G++ AL LF KM ++ N ++W ++I + + +AL LF +MQ + PD
Sbjct: 192 VKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 323 KIFVTIISC---LG--EQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
+S LG EQGKW I R + G V L+D++ + G+ + A
Sbjct: 248 VSLANALSACAQLGALEQGKW--IHSYLNKTRIRMDSVLGCV---LIDMYAKCGEMEEAL 302
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
E + +K + V + AL + YA G +AI M+ GI+PN++ ++ A
Sbjct: 303 EVFKNIKKKSV----QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Query: 438 SNAGRYMEAMSVYHHI-KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
S G E +++ + ++ + P + Y ++ R DE + M
Sbjct: 359 SYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 153/327 (46%), Gaps = 57/327 (17%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
+++ +GI LLD + G + + N M K NS +S ++G Y NG
Sbjct: 290 KLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGYCQNG 345
Query: 232 MWKKATEVLEEIRER------------------KISLDTH-------------IYNSIID 260
+KA E+ E+ E+ ++ + H + +++ID
Sbjct: 346 EHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALID 405
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+GK G + A +++ KM +R N++TWN+++ + G +A++ F+DM ++G+ P
Sbjct: 406 LYGKSGCIDSASRVYSKMS---IR-NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKP 461
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMT-SRGNKKYGAVYAVLVDIFGQYGKFQNAE-- 377
D F+ I++ G G D + F M S G K Y+ ++D+ G+ G F+ AE
Sbjct: 462 DYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENL 521
Query: 378 ----ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
EC GVL+ P CA ANA A + + E+ K ++ME +EP M +L
Sbjct: 522 LERAECRNDASLWGVLLGP---CA-ANADASR-VAERIAK--RMME---LEPKYHMSYVL 571
Query: 434 I-NAFSNAGRYMEAMSVYHHIKESGVS 459
+ N + GR+ +A+++ + GV+
Sbjct: 572 LSNMYKAIGRHGDALNIRKLMVRRGVA 598
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 130/280 (46%), Gaps = 13/280 (4%)
Query: 211 KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE 270
KG P+ + ++ + K+ E+ ++ I + + +S++D +GK G + E
Sbjct: 259 KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVRE 318
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
A ++F M K+ N V+W++L+ +C+ G++ KA+ +F +M+E+ LY F T++
Sbjct: 319 ARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTVLK 370
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
K+ RG V + L+D++G+ G +A + ++
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 391 SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
+ A+ +A AQ G E+A+ M +GI+P+ + ++ A + G E + +
Sbjct: 431 ----WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYF 486
Query: 451 HHIKES-GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+ +S G+ P Y+ ++ R F+E + +R E
Sbjct: 487 VLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAE 526
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 120/293 (40%), Gaps = 33/293 (11%)
Query: 207 EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKI---SLDTH-------IYN 256
EM G N F S V KA L E+R + + TH I +
Sbjct: 153 EMVSFGLDANEFTLSSAV----------KACSELGEVRLGRCFHGVVITHGFEWNHFISS 202
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE- 315
++ +G E +A ++F +M + P+++ W +++ + Y +AL LF M
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
+GL PD F T+++ G + K+ + + G V + L+D++G+ G +
Sbjct: 259 KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVRE 318
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
A + + + + + AL Y Q G E+AI++ + ME E ++ ++
Sbjct: 319 ARQVFNGMSKKNSVS----WSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLK 370
Query: 436 AFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
A + ++ G +++ + L+ + ++ D +Y +M
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 144/307 (46%), Gaps = 11/307 (3%)
Query: 188 LLDYFVSAGRLEDTWSTINEM-----KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
L F+ R +STI+E+ K + FV +I+ LY +GM + A ++ +E
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVI-RIMLLYGYSGMAEHAHKLFDE 147
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM-QKEGVRPNIVTWNSLIKWHCREG 301
+ E +N+++ + +L EA+K F ++ +K G+ P++VT+N++IK CR+G
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
L++F ++++ G PD F T++ + + + ++ M S+ Y
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
V + KF +A + +K+EG+ + + AL AY E+ +K M+ +
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHH-IKESGVS-PDLVTYTTLMKAFIRTKKFD 479
G+ P+ V MLI G A+ V IK +S P++ Y +++ + K D
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKID 385
Query: 480 EVPIIYK 486
E + K
Sbjct: 386 EATQLVK 392
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 112/246 (45%), Gaps = 1/246 (0%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK-GFQPNSFVYSKIVGLYRDN 230
EM + RT +++ LL +V++ +L++ T E+ K G P+ Y+ ++
Sbjct: 147 EMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRK 206
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
G + EE+ + D +N++++ F + E +++ M+ + + PNI ++
Sbjct: 207 GSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
NS ++ R +T ALNL M+ +G+ PD + +I+ + + KC+ M
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE 326
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
+G Y +L+ + + G A E + +L PN++ + G ++
Sbjct: 327 KGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDE 386
Query: 411 AIKVLQ 416
A ++++
Sbjct: 387 ATQLVK 392
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 262 FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ-GLYP 320
+G G A KLF +M + + ++N+L+ + +A+ F ++ E+ G+ P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D + T+I L +G D I FE + G
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNG---------------------------- 223
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
E L+S F L + ++ L + ++ +M+ + + PNI N + +
Sbjct: 224 ----FEPDLIS---FNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
++ +A+++ +K G+SPD+ TY L+ A+ +EV Y M+ G TPD
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I C++G++D +S+ ++E GF+ S+ L+E E D ++ M
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
L P + YN M GI TY L+ + LE
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ NEMK KG P++ Y ++ L G +A EV EE + K+ ++Y ++
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 260 DTFGKYGELGEALKL 274
+ G++ EA +L
Sbjct: 376 ERLMGAGKIDEATQL 390
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 154/325 (47%), Gaps = 24/325 (7%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R + L+ +V G+ E+ ++M+ +G +P S + + G ++ +
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ LD + S+++ + K G + A +F +M ++VTWN +I + +
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQ 352
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISC--------LGEQGKWDTIKKCFESMTSR 351
+G A+ + M+ + L D T++S LG++ + I+ FES
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI-- 410
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
+ + ++D++ + G +A++ + + ++ ++ L AYA+ GL +A
Sbjct: 411 ------VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI----LWNTLLAAYAESGLSGEA 460
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+++ M+ EG+ PN++ N++I + G+ EA ++ ++ SG+ P+L+++TT+M
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 472 FIRTKKFDEVPIIYKRMETDGCTPD 496
++ +E + ++M+ G P+
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPN 545
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 46/278 (16%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
F+ + + S ++ +Y G A +V + E+ D ++N+++ + + G GEAL
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEAL 461
Query: 273 KLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
+LF MQ EGV PN++TWN +I R G +A ++F MQ G+ P+ + T+++ +
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGM 521
Query: 333 GEQGKWDTIKKCFESMTSRG---------------------------------NKKYGAV 359
+ G + M G N ++ ++
Sbjct: 522 VQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSL 581
Query: 360 YAV---LVDIFGQYGKFQNAEECVQA-LKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
++ LVD++ + G AE+ + L SE L + A+ +AYA G ++AI +
Sbjct: 582 VSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSN-----AMISAYALYGNLKEAIALY 636
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI 453
+ +EG G++P+ + + +++A ++AG +A+ ++ I
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDI 674
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 131/300 (43%), Gaps = 20/300 (6%)
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKI-SLDTHI 254
G +++ S + EM + + +Y +I+ ++++ ++I R + + D +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEIYGEIL----QGCVYERDLSTGKQIHARILKNGDFYA 104
Query: 255 YNSIIDT-----FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
N I+T + K L A LF K++ VR N+ +W ++I CR G AL
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLR---VR-NVFSWAAIIGVKCRIGLCEGALMG 160
Query: 310 FSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFES-MTSRGNKKYGAVYAVLVDIFG 368
F +M E ++PD + + G KW + + G + V + L D++G
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGAL-KWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 369 QYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIV 428
+ G +A + + + + AL Y Q G E+AI++ M +G+EP V
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVA----WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
++ ++A +N G E + +G+ D + T+L+ + + + +++ RM
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM 335
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 153/352 (43%), Gaps = 18/352 (5%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
++ L++ + G A+ L M+ G + ++ +I +L G+ EA +F +M
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
G+ P L + +M +SG+ + + L L
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Query: 199 EDTWSTINEMKMKGFQPNSFVY--SKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
TI+ ++ Q +S V + +V +Y G KA E++ K+ + + N
Sbjct: 563 H-IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA----EKVFGSKLYSELPLSN 617
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM-QE 315
++I + YG L EA+ L+ ++ G++P+ +T +++ GD +A+ +F+D+ +
Sbjct: 618 AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
+ + P + + ++ L G+ + + E M + + + ++ + K Q
Sbjct: 678 RSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDAR------MIQSLVASCNK-QR 730
Query: 376 AEECVQALKSEGVLVSP---NIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
E V L + + P + ++NAYA +G ++ +K+ ++M+ +G++
Sbjct: 731 KTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/381 (18%), Positives = 141/381 (37%), Gaps = 47/381 (12%)
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
+ G + A+ L + M G + + + + + A N+G E I G++
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME---- 306
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
L NI + D + T+ +++ +V G +ED M
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
+++ + + + ++ K EV D + ++++D + K G +
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
+A K+F V +++ WN+L+ + G +AL LF MQ +G+ P+ + I
Sbjct: 427 VDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI 482
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
I L G+ D K F M S G
Sbjct: 483 ILSLLRNGQVDEAKDMFLQMQSSG------------------------------------ 506
Query: 389 LVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
+ PN+ + + N Q G E+AI L+ M+ G+ PN + + ++A ++
Sbjct: 507 -IIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIG 565
Query: 447 MSVYHHIKESGVSPDLVTYTT 467
+++ +I + LV+ T
Sbjct: 566 RTIHGYIIRNLQHSSLVSIET 586
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 130/275 (47%), Gaps = 12/275 (4%)
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF 275
N +S ++G+Y +N + A + E+I E+ + +++ ++ + + G++ EA +F
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEK----NAFVWSLMMSGYFRIGDVHEARAIF 231
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ 335
++ ++V WN+LI + + G A++ F +MQ +G PD +I+S +
Sbjct: 232 YRVFAR----DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQS 287
Query: 336 GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIF 395
G+ D ++ + RG + V L+D++ + G +NA +++ V ++
Sbjct: 288 GRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMI 347
Query: 396 CALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE 455
L A G ++A+++ ME ++P+ + ++ A + G ME + ++ +K
Sbjct: 348 SCL----AIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKT 403
Query: 456 SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
V P++ + L+ R+ K E + K M
Sbjct: 404 QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV 438
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 22/295 (7%)
Query: 175 DSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWK 234
D IW T L+ + G +D M+ +G++P++ S I+ +G
Sbjct: 238 DLVIWNT------LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLD 291
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
EV I R I L+ + N++ID + K G+L A +F + VR ++ NS+I
Sbjct: 292 VGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVF---ESISVR-SVACCNSMI 347
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
G +AL +FS M+ L PD F+ +++ G K F M ++ K
Sbjct: 348 SCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVK 407
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAI 412
+ L+ + G+ GK + A V+ + V PN + AL A E A
Sbjct: 408 PNVKHFGCLIHLLGRSGKLKEAYRLVKEMH-----VKPNDTVLGALLGACKVHMDTEMAE 462
Query: 413 KVLQIMEGEGIEPNIVMLNMLI---NAFSNAGRYMEAMSVYHHIKESGV--SPDL 462
+V++I+E G N N L N +++ R+ A ++ +++ G+ SP L
Sbjct: 463 QVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGL 517
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 36/265 (13%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D + +S+I +GK G + A K+F +M + N+ TWN++I + GD A LF
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPER----NVATWNAMIGGYMSNGDAVLASGLF 135
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+E + + ++ +I G++ + + ++ FE M K ++V++ ++
Sbjct: 136 ---EEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE--LKNVKAWSVMLGVYVNN 190
Query: 371 GKFQNAEECVQALKSEGVLV---------------------------SPNIFCALANAYA 403
K ++A + + + + V I+ L YA
Sbjct: 191 RKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYA 250
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLV 463
Q G + AI M+GEG EP+ V ++ +++A + +GR V+ I G+ +
Sbjct: 251 QNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQF 310
Query: 464 TYTTLMKAFIRTKKFDEVPIIYKRM 488
L+ + + + +++ +
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESI 335
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 143/306 (46%), Gaps = 16/306 (5%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++ +L + G ED N+M G +PN + ++ +++ I
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
E+++ L+ + +++D K ++ A ++F ++ G + N+VTWN++I + R GD
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDM 347
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+ A LF M ++ + + ++I+ G+ + FE M G+ K V +
Sbjct: 348 SSARQLFDTMPKRNVVS----WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV--TM 401
Query: 364 VDIFGQYGKFQNAE--EC-VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
+ + G + E +C V ++ + ++ + + +L YA+ G +A +V M+
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK- 460
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
E ++V N L AF+ G +E +++ +K+ G+ PD VTYT+++ A R E
Sbjct: 461 ---ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKE 517
Query: 481 VPIIYK 486
I+K
Sbjct: 518 GQRIFK 523
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 134/306 (43%), Gaps = 41/306 (13%)
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
SAGR + + E K+ GF + +V + I+ +Y + + A +V ++I +RK S
Sbjct: 115 SAGRFGILFQALVE-KL-GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGS---- 168
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGV---------------------------RPN 286
+N +I + K+G EA KLF M + V +
Sbjct: 169 DWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE 346
+V+WN+++ + + G AL LF+DM G+ P+ +V +IS + + +
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVK 288
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
+ + + V L+D+ + Q+A L ++ LV+ N A+ + Y + G
Sbjct: 289 LIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN---AMISGYTRIG 345
Query: 407 LCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS-PDLVTY 465
A ++ M + N+V N LI +++ G+ A+ + + + G S PD VT
Sbjct: 346 DMSSARQLFDTMP----KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTM 401
Query: 466 TTLMKA 471
+++ A
Sbjct: 402 ISVLSA 407
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 239 VLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHC 298
+++ IR+ +I L+ Y S+I + + G L EA ++F +M++ ++V++N+L
Sbjct: 420 IVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFA 475
Query: 299 REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESM 348
GD + LNL S M+++G+ PD + ++++ G ++ F+S+
Sbjct: 476 ANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 17/214 (7%)
Query: 106 LGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNL--YNIXXXXXXXXXXX 163
LG Q + ++ +I +G S A LF M P+ N+ +N
Sbjct: 325 LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM------PKRNVVSWNSLIAGYAHNGQA 378
Query: 164 XXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTW---STINEMKMKGFQPNSFVY 220
+M+D G + E ++ + G + D ++ ++ + N Y
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEV--TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY 436
Query: 221 SKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQK 280
++ +Y G +A V +E++ER D YN++ F G+ E L L KM+
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 281 EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
EG+ P+ VT+ S++ R G + +F ++
Sbjct: 493 EGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
G+ +Y +L+ F L + +M + P+ Y ++ + G A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
E+L+++ + D Y +++++ + +L EA KL +M+ +G P++V +N++I
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
CRE A + DM G P+ + T+I L +QG +D KK E M S+G +
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+V LV F +GK + A + V+ + G
Sbjct: 365 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 119/285 (41%), Gaps = 36/285 (12%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKY-GELGE 270
G+ +++ ++ +Y + + +K ++ E + N I+D + G L +
Sbjct: 114 GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQK 173
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
A +LF + GV PN ++N L++ C D + A LF M E+ + PD
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD--------- 224
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
D+ Y +L+ F + G+ A E + + ++G +
Sbjct: 225 -------VDS-------------------YKILIQGFCRKGQVNGAMELLDDMLNKGFVP 258
Query: 391 SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
+ L N+ ++ +A K+L M+ +G P++V N +I F R M+A V
Sbjct: 259 DRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVL 318
Query: 451 HHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
+ +G SP+ V+Y TL+ FDE + M + G +P
Sbjct: 319 DDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 120/320 (37%), Gaps = 40/320 (12%)
Query: 176 SGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVG-LYRDNGMWK 234
SG T E + L+ + A E ST +M F P ++I+ L G +
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
KA E+ + R + +T YN ++ F +L A +LF KM + V P++ ++ LI
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
+ CR+G A+ L DM +G PD + T+++ L + + K M +G
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKV 414
Y + I G FC ++ A KV
Sbjct: 293 PDLVHYNTM--ILG--------------------------FC-------REDRAMDARKV 317
Query: 415 LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
L M G PN V LI + G + E + G SP L+K F
Sbjct: 318 LDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCS 377
Query: 475 TKKFDE----VPIIYKRMET 490
K +E V ++ K ET
Sbjct: 378 FGKVEEACDVVEVVMKNGET 397
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 93/245 (37%), Gaps = 35/245 (14%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y LI C++G ++ AM LL M GF SYT L+ +L + EA L M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G P L YN ++ F R
Sbjct: 288 LKGCNPDLVHYNT-----------------------------------MILGFCREDRAM 312
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D +++M G PNS Y ++G D GM+ + + LEE+ + S + N ++
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
F +G++ EA + + K G + TW +I C E + K D ++ +
Sbjct: 373 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEIT 432
Query: 320 PDPKI 324
D +I
Sbjct: 433 GDTRI 437
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 1/208 (0%)
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL-GEQGKWDTIKKCFESM 348
+ LIK + K L+ F M E P PK I+ L +G + F+S
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 349 TSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC 408
G Y +L+ F A + + V+ + + L + ++G
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 409 EQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
A+++L M +G P+ + L+N+ + EA + +K G +PDLV Y T+
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 469 MKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ F R + + + M ++GC+P+
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPN 329
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 147/331 (44%), Gaps = 14/331 (4%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
T T ++ F AG E+ + + G + N+ + ++ ++A VL
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+++ I+ + H +N I + K + EAL +M+ G RP ++++ ++I+ +C++
Sbjct: 214 LQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
++ K + S+M+ G P+ + TI+S L Q +++ + M G K Y
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSE-GVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
L+ + G+ + AE + E GV ++ + + ++ Y ++AI++L+ ME
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 420 GEGI-EPNIVMLNMLINA------FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ P++ L+ + G+ ++ M HH+ S D TYT L++
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL-----SLDESTYTFLIQRL 447
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
R + +++ M + TP + +L
Sbjct: 448 CRANMCEWAYCLFEEMISQDITPRHRTCLLL 478
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 3/274 (1%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ I + + A R+E+ TI EMK GF+P Y+ I+ Y + K E+L E+
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
++ Y +I+ + E EAL++ +M++ G +P+ + +N LI R G
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 304 TKALNLFS-DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG--NKKYGAVY 360
+A +F +M E G+ + + ++I+ + D + + M S N
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
+L F + + + + + + + + + L + +CE A + + M
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
+ I P +L+ + A + H +K
Sbjct: 466 QDITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 10/260 (3%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK--WHCREGDYTKALNLFS 311
I+N I+ G+ G+ +F ++ + + + + L+ H D+ AL +
Sbjct: 53 IWNVIV---GRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILK 109
Query: 312 DMQE-QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA-VYAVLVDIFGQ 369
+ +G + + LG+ KWD +K+ E M RG+K A ++ F
Sbjct: 110 WAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM--RGDKLVTLNTVAKIMRRFAG 167
Query: 370 YGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
G+++ A L G+ + L + ++ EQA VL ++ I PN
Sbjct: 168 AGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHT 226
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
N+ I+ + A R EA+ +K G P +++YTT+++ + + +F +V + ME
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 490 TDGCTPDRKAKQMLQDALTA 509
+G P+ + +L A
Sbjct: 287 ANGSPPNSITYTTIMSSLNA 306
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 147/331 (44%), Gaps = 14/331 (4%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
T T ++ F AG E+ + + G + N+ + ++ ++A VL
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+++ I+ + H +N I + K + EAL +M+ G RP ++++ ++I+ +C++
Sbjct: 214 LQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
++ K + S+M+ G P+ + TI+S L Q +++ + M G K Y
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSE-GVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
L+ + G+ + AE + E GV ++ + + ++ Y ++AI++L+ ME
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 420 GEGI-EPNIVMLNMLINA------FSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+ P++ L+ + G+ ++ M HH+ S D TYT L++
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL-----SLDESTYTFLIQRL 447
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
R + +++ M + TP + +L
Sbjct: 448 CRANMCEWAYCLFEEMISQDITPRHRTCLLL 478
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 3/274 (1%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ I + + A R+E+ TI EMK GF+P Y+ I+ Y + K E+L E+
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
++ Y +I+ + E EAL++ +M++ G +P+ + +N LI R G
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 304 TKALNLFS-DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG--NKKYGAVY 360
+A +F +M E G+ + + ++I+ + D + + M S N
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
+L F + + + + + + + + + L + +CE A + + M
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
+ I P +L+ + A + H +K
Sbjct: 466 QDITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 10/260 (3%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK--WHCREGDYTKALNLFS 311
I+N I+ G+ G+ +F ++ + + + + L+ H D+ AL +
Sbjct: 53 IWNVIV---GRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGILK 109
Query: 312 DMQE-QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA-VYAVLVDIFGQ 369
+ +G + + LG+ KWD +K+ E M RG+K A ++ F
Sbjct: 110 WAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM--RGDKLVTLNTVAKIMRRFAG 167
Query: 370 YGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
G+++ A L G+ + L + ++ EQA VL ++ I PN
Sbjct: 168 AGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHT 226
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
N+ I+ + A R EA+ +K G P +++YTT+++ + + +F +V + ME
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 490 TDGCTPDRKAKQMLQDALTA 509
+G P+ + +L A
Sbjct: 287 ANGSPPNSITYTTIMSSLNA 306
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 176 SGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVG-LYRDNGMWK 234
SG T E + L+ + A E ST +M F P ++I+ L G +
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
KA E+ + R + +T YN ++ F +L A +LF KM + V P++ ++ LI
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
+ CR+G A+ L DM +G PD T+I L +QG +D KK E M S+G
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFS 288
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+ +V LV F +GK + A + V+ + G
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 7/255 (2%)
Query: 72 GEELSSEFYSQLISKCCKEGNL-DRAMSLLAQMEALGFQLSSYSYTHLIEAL-GNVGRTS 129
G L+ E ++ LI K E L ++ +S +M F +++ L + G
Sbjct: 114 GYPLTGEIFTYLI-KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILL 189
+A LFK G+ P YN+ +M++ + ++Y+IL+
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 190 DYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKIS 249
F G++ +++M KGF P+ ++G D GM+ + + LEE+ + S
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFS 288
Query: 250 LDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNL 309
+ N ++ F +G++ EA + + K G + TW +I C E + K
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLF 348
Query: 310 FSDMQEQGLYPDPKI 324
D ++ + D +I
Sbjct: 349 LEDAVKEEITGDTRI 363
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 116/227 (51%), Gaps = 10/227 (4%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
G ++ ++ I+++ ++ G+ E+ +T +MK++ FQPN+ + IV + +
Sbjct: 564 GFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVG 623
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
V + + T + NS++D + K G + + K F+++ + IV+WN+++
Sbjct: 624 MSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNK----YIVSWNTMLSA 679
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
+ G + A++LF MQE L PD F++++S G + K+ FE M R +K
Sbjct: 680 YAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGER-HKIE 738
Query: 357 GAV--YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANA 401
V YA +VD+ G+ G F A E ++ ++ V S ++ AL N+
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMR---VKTSVGVWGALLNS 782
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 129/311 (41%), Gaps = 14/311 (4%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM---WKKATEVL 240
+ L + G + MK+ G P+S +VG+ + + + + V
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDS---RTMVGMLQTCAFCSDYARGSCVY 525
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+I + + H+ +++I+ F K L A+ LF K G + V+WN ++ +
Sbjct: 526 GQIIKHGFDSECHVAHALINMFTKCDALAAAIVLF---DKCGFEKSTVSWNIMMNGYLLH 582
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
G +A+ F M+ + P+ FV I+ E S+ G V
Sbjct: 583 GQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVG 642
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
LVD++ + G +++E+C + S +VS N + +AYA GL A+ + M+
Sbjct: 643 NSLVDMYAKCGMIESSEKCFIEI-SNKYIVSWN---TMLSAYAAHGLASCAVSLFLSMQE 698
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE-SGVSPDLVTYTTLMKAFIRTKKFD 479
++P+ V +++A +AG E ++ + E + ++ Y ++ + F
Sbjct: 699 NELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFG 758
Query: 480 EVPIIYKRMET 490
E + +RM
Sbjct: 759 EAVEMMRRMRV 769
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 126/282 (44%), Gaps = 16/282 (5%)
Query: 211 KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE 270
KG P+ + ++ + + +KK + + I E + D +I ++++ + K +L
Sbjct: 94 KGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVS 153
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
A ++F KM + ++VTWN+++ + G + AL LF DM+ + D +I
Sbjct: 154 ARQVFDKMHVK----DVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIP 209
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV---LVDIFGQYGKFQNAEECVQALKSEG 387
+ + K D + +C + K G ++A L+D++ AE + + +
Sbjct: 210 AVSKLEKSD-VCRCLHGLV----IKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRK- 263
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
+ + + AYA G E+ +++ +M + N V + A + G ++ +
Sbjct: 264 ---DESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGI 320
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+++ + + G+ D+ T+LM + + + + ++ +E
Sbjct: 321 AIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 110/278 (39%), Gaps = 7/278 (2%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R ++ ++ + AG+ ++ S +M +PN+ + ++ + +
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ I + ++I + K G ALK F ++ + + V +N+L + + +
Sbjct: 424 HCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK----DAVAFNALAQGYTQ 479
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
GD KA +++ +M+ G+ PD + V ++ + + + G V
Sbjct: 480 IGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHV 539
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
L+++F + A E VS NI + N Y G E+A+ + M+
Sbjct: 540 AHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNI---MMNGYLLHGQAEEAVATFRQMK 596
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESG 457
E +PN V ++ A + MSV+ + + G
Sbjct: 597 VEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCG 634
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 15/215 (6%)
Query: 90 EGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNL 149
G + A++ QM+ FQ ++ ++ +++ A + + +I CG + +
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPV 641
Query: 150 YNIXXXXXXXXXXXXXXXXXXXEMVDSGI--WRTRETYEILLDYFVSAGRLEDTWSTINE 207
N E+ + I W T +L + + G S
Sbjct: 642 GNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT------MLSAYAAHGLASCAVSLFLS 695
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER-KISLDTHIYNSIIDTFGKYG 266
M+ +P+S + ++ R G+ ++ + EE+ ER KI + Y ++D GK G
Sbjct: 696 MQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAG 755
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLI---KWHC 298
GEA+++ +M+ V+ ++ W +L+ + HC
Sbjct: 756 LFGEAVEMMRRMR---VKTSVGVWGALLNSSRMHC 787
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 130/312 (41%), Gaps = 26/312 (8%)
Query: 211 KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIR---ERKISLDTHIYNSIIDTFGKYGE 267
K F P+S +Y+ ++ Y NG +LE +R +R D Y +++ F G
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ-GLYPDPKIFV 326
+ A ++ +M + GV N +T+N L+K +C++ +A +L +M E G+ PD +
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 327 TIIS-CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKS 385
II C+ + F M +RG Y L+ F G+ + A + +
Sbjct: 528 IIIDGCILIDDSAGAL-AFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Query: 386 EG-VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYM 444
+ V V + L Y + GL E A +V+ M+ G PN+ L N S A +
Sbjct: 587 DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPG 646
Query: 445 EAMSVYHHIKE-------------------SGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
+A+ ++ IKE + PD TL +R F + I
Sbjct: 647 DALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEII 706
Query: 486 KRMETDGCTPDR 497
ME +G P++
Sbjct: 707 ACMEENGIPPNK 718
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 19/264 (7%)
Query: 62 LFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLS---SYSYTHL 118
L P AP S Y+ L+ K G + +L M + S +YT +
Sbjct: 405 LLPKVFAP------DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTV 458
Query: 119 IEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV-DSG 177
+ A N G A + EM G+ YN+ EM D+G
Sbjct: 459 VSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAG 518
Query: 178 IWRTRETYEILLDYFV----SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
I +Y I++D + SAG L + NEM+ +G P Y+ ++ + +G
Sbjct: 519 IEPDVVSYNIIIDGCILIDDSAGAL----AFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 234 KKATEVLEE-IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
K A V +E + + ++ +D +N +++ + + G + +A ++ +M++ G PN+ T+ S
Sbjct: 575 KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGS 634
Query: 293 LIKWHCREGDYTKALNLFSDMQEQ 316
L + AL L+ +++E+
Sbjct: 635 LANGVSQARKPGDALLLWKEIKER 658
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 22/242 (9%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQM-EALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
Y+ L+ CK+ +DRA LL +M E G + SY +I+ + ++ A F EM
Sbjct: 490 YNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEM 549
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV-DSGIWRTRETYEILLDYFVSAGR 197
G+ P Y EM+ D + + +L++ + G
Sbjct: 550 RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL 609
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRER----------- 246
+ED ++ MK GF PN Y + A + +EI+ER
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSD 669
Query: 247 --------KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL-IKWH 297
+ D + +++ D + +AL++ M++ G+ PN + + ++ H
Sbjct: 670 SSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMH 729
Query: 298 CR 299
R
Sbjct: 730 SR 731
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 128/276 (46%), Gaps = 12/276 (4%)
Query: 214 QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALK 273
+P+ F Y + + D + +L + + ++ L +H++N+ I F G++ A K
Sbjct: 153 RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARK 212
Query: 274 LFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLG 333
+F E ++V+WN LI + + G+ KA+ ++ M+ +G+ PD + ++S
Sbjct: 213 VF----DESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 268
Query: 334 EQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN 393
G + K+ +E + G + + L+D+F + G A L+ ++
Sbjct: 269 MLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS--- 325
Query: 394 IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI 453
+ + + YA+ GL + + K+ ME E ++V+ N +I A R +A++++ +
Sbjct: 326 -WTTMISGYARCGLLDVSRKLFDDME----EKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 454 KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
+ S PD +T + A + D I++ +E
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 20/309 (6%)
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
V A R +D + EM+ +P+ + G + I + +SL+
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
+ S++D + K G + EAL +F +Q N +T+ ++I GD + A++ F++
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN-KKYGAVYAVLVDIFGQYG 371
M + G+ PD F+ ++S G T + F M SR N Y+++VD+ G+ G
Sbjct: 481 MIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAG 540
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG---LCEQAIKVLQIMEGEGIEPNIV 428
+ A+ ++++ E ++ AL G L E+A K +++E + + I
Sbjct: 541 LLEEADRLMESMPMEA---DAAVWGALLFGCRMHGNVELGEKAAK--KLLELDPSDSGIY 595
Query: 429 MLNMLINAFSNAGRYMEAMSVYHHIKESGVS-----PDLVTYTTLMKAFIRTKKFDEVPI 483
+L L + A + +A + E GV + + + +R K E
Sbjct: 596 VL--LDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEK 653
Query: 484 IYKRMETDG 492
IY R+ G
Sbjct: 654 IYDRLHCLG 662
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/407 (18%), Positives = 146/407 (35%), Gaps = 42/407 (10%)
Query: 113 YSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXE 172
++Y L + ++ +S M+ + LK RL L + +
Sbjct: 157 FTYPVLFKVCADLRLSSLGHMILGHV----LKLRLELVSHVHNASIHMFASCGDMENARK 212
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
+ D R ++ L++ + G E M+ +G +P+ +V G
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD 272
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV--------- 283
+ E E ++E + + + N+++D F K G++ EA ++F ++K +
Sbjct: 273 LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISG 332
Query: 284 ------------------RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIF 325
++V WN++I + AL LF +MQ PD
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 326 VTIISCLGEQGKWDT---IKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQA 382
+ +S + G D I + E + N G LVD++ + G A
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALG---TSLVDMYAKCGNISEALSVFHG 449
Query: 383 LKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGR 442
+++ L + A+ A G AI M GI P+ + L++A + G
Sbjct: 450 IQTRNSLT----YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505
Query: 443 YMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
+ +K ++P L Y+ ++ R +E + + M
Sbjct: 506 IQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 23/225 (10%)
Query: 276 VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL---YPD----PKIFVTI 328
VK+ K PNI +WN I+ + ++ L+ M G PD P +F
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 329 ----ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALK 384
+S LG +K E ++ V+ + +F G +NA +
Sbjct: 167 ADLRLSSLGHMILGHVLKLRLELVSH--------VHNASIHMFASCGDMENARKVFDESP 218
Query: 385 SEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYM 444
LVS N L N Y + G E+AI V ++ME EG++P+ V + L+++ S G
Sbjct: 219 VRD-LVSWN---CLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLN 274
Query: 445 EAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
Y ++KE+G+ + LM F + E I+ +E
Sbjct: 275 RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 133/307 (43%), Gaps = 13/307 (4%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
Y ++ +V+ G ++ + M G + + F Y ++ G+ + +V +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
R+ H NS++ + K G+ EA +F KM + ++V+WN+L+ + G
Sbjct: 313 LRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHI 367
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+A +F +M+E+ + ++ +IS L E G + K F M G + ++
Sbjct: 368 GEAKLIFKEMKEKNILS----WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ G + N ++ L G S + AL YA+ G+ E+A +V + M
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC--- 480
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
+ V N LI A G EA+ VY + + G+ PD +T T++ A D+
Sbjct: 481 -LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 484 IYKRMET 490
+ MET
Sbjct: 540 YFDSMET 546
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 178/426 (41%), Gaps = 92/426 (21%)
Query: 73 EELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEAD 132
E+ S F + L+S K G D A ++ +M A S+ L+ + G EA
Sbjct: 316 EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDL----VSWNALLSGYVSSGHIGEAK 371
Query: 133 MLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYF 192
++FKEM K + NI ++ I++
Sbjct: 372 LIFKEM-----KEK----NIL------------------------------SWMIMISGL 392
Query: 193 VSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDT 252
G E+ + MK +GF+P + +S + G + + ++ KI D+
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL--KIGFDS 450
Query: 253 HIY--NSIIDTFGKYGELGEALKLFVKMQKEGVRPNI--VTWNSLIKWHCREGDYTKALN 308
+ N++I + K G + EA ++F M P + V+WN+LI + G +A++
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTM------PCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 309 LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA-VYAVLVDIF 367
++ +M ++G+ PD +T+++ G D +K F+SM + GA YA L+D+
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLL 564
Query: 368 GQYGKFQNAEECVQALKSE---------------------GVLVSPNIF----------C 396
+ GKF +AE +++L + G++ + +F
Sbjct: 565 CRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYM 624
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNI----VMLNMLINAF-SNAGRYMEAMSVYH 451
L+N +A G E+ +V ++M G++ + + + ++ F + + EA +VY
Sbjct: 625 LLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYI 684
Query: 452 HIKESG 457
++++ G
Sbjct: 685 YLQDLG 690
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
GFQP + + ++++ +Y + A ++ +EI E D +++ + G++ A
Sbjct: 44 GFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP----DKIARTTMVSGYCASGDITLA 99
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+F K + V +N++I D A+NLF M+ +G PD F ++++
Sbjct: 100 RGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAG 157
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAV---LVDIFGQYGKFQNAEECVQALKSEGV 388
L D K+C + + G + +V LV ++ + + + + E +
Sbjct: 158 LALVA--DDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 389 LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN--IVMLNMLINAFSNAGRYMEA 446
+ + Y + G + ++L EG++ N +V N +I+ + N G Y EA
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELL-----EGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKA 471
+ + + SG+ D TY ++++A
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRA 295
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 177/431 (41%), Gaps = 42/431 (9%)
Query: 75 LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADML 134
L SEF ++ C + +L RAM + +++ G S +Y+ LI+ + E +++
Sbjct: 29 LLSEF-----TRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLI 83
Query: 135 FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVS 194
+ + + G +P + L N+ ++ D R ++ ++ +
Sbjct: 84 CRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAH----QLFDQMPQRNVISWTTMISAYSK 139
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHI 254
+ + M +PN + YS + L NGM I+E + D +
Sbjct: 140 CKIHQKALELLVLMLRDNVRPNVYTYSSV--LRSCNGMSDVRMLHCGIIKE-GLESDVFV 196
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
+++ID F K GE +AL +F +M V + + WNS+I + AL LF M+
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 315 EQGLYPDPKIFVTII-SC-------LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
G + +++ +C LG Q +K ++ N LVD+
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNN--------ALVDM 302
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
+ + G ++A +K V+ + LA Q G ++A+K+ + M+ G +PN
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLA----QNGYSQEALKLFERMKSSGTKPN 358
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKE-SGVSPDLVTYTTLMKAFIRTKKFDEVPIIY 485
+ + ++ A S+AG + + +K+ G+ P Y ++ + K D+ +
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 486 KRMETDGCTPD 496
ME C PD
Sbjct: 419 NEME---CEPD 426
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 174/420 (41%), Gaps = 43/420 (10%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+Q I+ C LD A+S + QM+ + + + Y L + + L+ M+
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQ----EPNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEI-----LLDYFVSA 195
+ P Y+ E + + IW+ + + L+D++ +
Sbjct: 865 DSVSPSSYTYS-------SLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSAT 917
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
GR+ + +EM + + ++ +V YR A + ++ E+ +
Sbjct: 918 GRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS---- 969
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N +I+ + G L +A LF +M + +I++W ++IK + + Y +A+ +F M E
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMME 1025
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
+G+ PD T+IS G + K+ G + + LVD++ + G +
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLE- 1084
Query: 376 AEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+AL L N+FC ++ A G ++A+K+ ME E ++PN V +
Sbjct: 1085 -----RALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV 1139
Query: 434 INAFSNAGRYMEAMSVYHH-IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
A ++AG E +Y I + + ++ Y ++ F + +IY+ +E G
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAG------LIYEALELIG 1193
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 99/243 (40%), Gaps = 49/243 (20%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+YN++ F +L+L+V+M ++ V P+ T++SL+K + ++L + +
Sbjct: 838 VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQ--AHI 895
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
+ G KI T+I G+ +K F+ M R + + +V + +
Sbjct: 896 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDD----IAWTTMVSAYRRVLDM 951
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+A +LAN + E N N L
Sbjct: 952 DSAN-------------------SLANQMS--------------------EKNEATSNCL 972
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGC 493
IN + G +A S+++ + D++++TT++K + + K++ E ++ +M +G
Sbjct: 973 INGYMGLGNLEQAESLFNQMP----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 494 TPD 496
PD
Sbjct: 1029 IPD 1031
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 166/386 (43%), Gaps = 49/386 (12%)
Query: 74 ELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
E+S + L+ CK G LD+A ++ M + +T ++ + GR EA +
Sbjct: 179 EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDEARV 234
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
LF+ + D +W +++ +V
Sbjct: 235 LFER---------------------------------SPVKDVVLWTA------MMNGYV 255
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
R ++ M+ G +P++FV ++ G ++ + I E ++++D
Sbjct: 256 QFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV 315
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+ +++D + K G + AL++F ++++ + +W SLI G +AL+L+ +M
Sbjct: 316 VGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIYGLAMNGMSGRALDLYYEM 371
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY-AVLVDIFGQYGK 372
+ G+ D FV +++ G +K F SMT R N + + + + L+D+ + G
Sbjct: 372 ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGL 431
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
AEE + ++ E ++C+L +A G + A +V + +E + + +
Sbjct: 432 LDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAH-TL 490
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGV 458
L + +++A R+ + +V +K+ G+
Sbjct: 491 LASVYASANRWEDVTNVRRKMKDLGI 516
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 121/282 (42%), Gaps = 23/282 (8%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
F+ + + + +V ++ G KA V + +R++ + + S++ + G + EA
Sbjct: 178 FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDEAR 233
Query: 273 KLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
LF ++ V+ ++V W +++ + + + +AL LF MQ G+ PD + V++++
Sbjct: 234 VLF---ERSPVK-DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGC 289
Query: 333 G-----EQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
EQGKW I +K G LVD++ + G + A E +K
Sbjct: 290 AQTGALEQGKW--IHGYINENRVTVDKVVG---TALVDMYAKCGCIETALEVFYEIKER- 343
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
+ +L A G+ +A+ + ME G+ + + ++ A ++ G E
Sbjct: 344 ---DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGR 400
Query: 448 SVYHHIKE-SGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
++H + E V P + L+ R DE + +M
Sbjct: 401 KIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 137/333 (41%), Gaps = 36/333 (10%)
Query: 185 YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATE---VLE 241
Y +L + E++ +G P++F ++ + G +K E V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVL---KSIGRLRKVIEGEKVHG 70
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
+ + D+++ NS++ + G++ K+F +M + ++V+WN LI + G
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR----DVVSWNGLISSYVGNG 126
Query: 302 DYTKALNLFSDM-QEQGLYPDPKIFVTIISC--------LGEQGKWDTIKKCFESMTSRG 352
+ A+ +F M QE L D V+ +S +GE+ + + FE G
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGER-IYRFVVTEFEMSVRIG 185
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
N LVD+F + G A +++ + V + ++ Y G ++A
Sbjct: 186 N--------ALVDMFCKCGCLDKARAVFDSMRDKNV----KCWTSMVFGYVSTGRIDEA- 232
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF 472
+++ ++V+ ++N + R+ EA+ ++ ++ +G+ PD +L+
Sbjct: 233 ---RVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGC 289
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQD 505
+T ++ I+ + + T D+ L D
Sbjct: 290 AQTGALEQGKWIHGYINENRVTVDKVVGTALVD 322
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 135/299 (45%), Gaps = 11/299 (3%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
+Y ++ + +G ED + EM +P+SF S ++ ++ + K E+ +
Sbjct: 209 SYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV 268
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ-KEGVRPNIVTWNSLIKWHCREGD 302
+ I D +I +S++D + K + ++ ++F ++ ++G ++WNSL+ + + G
Sbjct: 269 IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG-----ISWNSLVAGYVQNGR 323
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
Y +AL LF M + P F ++I K+ + G + +
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
LVD++ + G + A + + ++ + A+ +A G +A+ + + M+ +G
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMN----VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHI-KESGVSPDLVTYTTLMKAFIRTKKFDE 480
++PN V ++ A S+ G EA ++ + K G++ +L Y + R K +E
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 120/280 (42%), Gaps = 17/280 (6%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++ L+ +V GR + +M +P + +S ++ ++ +
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ I ++++D + K G + A K+F +M + V+W ++I H G
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV----LDEVSWTAIIMGHALHGHG 425
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYG-----A 358
+A++LF +M+ QG+ P+ FV +++ G D F SMT K YG
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMT----KVYGLNQELE 481
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
YA + D+ G+ GK + A + + E + + + + L E+ + + +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 419 EGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
+ E + ++M NM +++ GR+ E + +++ G+
Sbjct: 542 DSENMGAYVLMCNM----YASNGRWKEMAKLRLRMRKKGL 577
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 129/262 (49%), Gaps = 8/262 (3%)
Query: 210 MKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELG 269
+ G ++FV + +Y G A +V + + ++ D ++++ + + G L
Sbjct: 144 VSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLE 199
Query: 270 EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTII 329
E +++ +M+ G+ NIV+WN ++ R G + +A+ +F + G PD +++
Sbjct: 200 EVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL 259
Query: 330 SCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
+G+ + + + +G K V + ++D++G+ G + +L ++ +
Sbjct: 260 PSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG----IISLFNQFEM 315
Query: 390 VSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSV 449
+ + A ++ GL ++A+++ ++ + + +E N+V +I + G+ +EA+ +
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 450 YHHIKESGVSPDLVTYTTLMKA 471
+ ++ +GV P+ VT +++ A
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPA 397
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 8/263 (3%)
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
K T+ I + D +I +I ++ Y +A + + P I +++SLI
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD----PTIYSFSSLI 88
Query: 295 KWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNK 354
+ +T+++ +FS M GL PD + + E + K+ G
Sbjct: 89 YALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD 148
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKV 414
V + ++ + G+ +A + + + V+ + CA YA++G E+ +++
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA----YARKGCLEEVVRI 204
Query: 415 LQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR 474
L ME GIE NIV N +++ F+ +G + EA+ ++ I G PD VT ++++ +
Sbjct: 205 LSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD 264
Query: 475 TKKFDEVPIIYKRMETDGCTPDR 497
++ + +I+ + G D+
Sbjct: 265 SEMLNMGRLIHGYVIKQGLLKDK 287
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 170/416 (40%), Gaps = 79/416 (18%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
S L+ ++G L+ + +L++ME+ G + + S+ ++ G EA ++F+++ +
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G P EM++ G ++ Y + G L+D
Sbjct: 246 LGFCP-----------DQVTVSSVLPSVGDSEMLNMG--------RLIHGYVIKQGLLKD 286
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
V S ++ +Y +G + + ++ + N+ I
Sbjct: 287 KC----------------VISAMIDMYGKSGHVYGIISLFNQFE----MMEAGVCNAYIT 326
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+ G + +AL++F +++ + N+V+W S+I + G +AL LF +MQ G+ P
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
+ VTI S L G ++ + G+ + +AV V +
Sbjct: 387 N---HVTIPSMLPACG----------NIAALGHGRSTHGFAVRVHL-------------- 419
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
L + ++ AL + YA+ G + V +M + N+V N L+N FS
Sbjct: 420 --------LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK----NLVCWNSLMNGFSMH 467
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM-ETDGCTP 495
G+ E MS++ + + + PD +++T+L+ A + DE +K M E G P
Sbjct: 468 GKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 13/216 (6%)
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW 290
G ++ ++ + + + LD + S+ D +GK G L +AL LF ++ R N V W
Sbjct: 465 GALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP----RVNSVPW 520
Query: 291 NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESM-T 349
N+LI H G KA+ LF +M ++G+ PD FVT++S G D + CFE M T
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 580
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
G Y +VD++G+ G+ + A ++ +KS + +I+ AL +A G +
Sbjct: 581 DYGITPSLKHYGCMVDMYGRAGQLETA---LKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Query: 410 QA-IKVLQIMEGEGIEPNIVMLNMLI-NAFSNAGRY 443
I + E +EP V ++L+ N +++AG++
Sbjct: 638 LGKIASEHLFE---VEPEHVGYHVLLSNMYASAGKW 670
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 131/320 (40%), Gaps = 75/320 (23%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+ N +ID + ++G L + K+F +M VR ++++WNS+IK + +A++LF +M
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMY---VR-DLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKC--FESMTSR----------GNK------K 355
+ + PD +++ S L + G I+ C + T R GN K
Sbjct: 340 RLSRIQPDCLTLISLASILSQLGD---IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 356 YGAV-----------------YAVLVDIFGQYGKFQNAEECVQALKSEG-VLVSPNIFCA 397
G V + ++ + Q G A E ++ EG + + + +
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK--- 454
+ A +Q G Q +K+ + G+ ++ ++ L + + GR +A+S+++ I
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 455 ----------------------------ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
+ GV PD +T+ TL+ A + DE ++
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 487 RMETD-GCTPDRKAKQMLQD 505
M+TD G TP K + D
Sbjct: 577 MMQTDYGITPSLKHYGCMVD 596
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D ++ S+I + +Y +G A LF +M VR ++ +WN++I +C+ G+ +AL L
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMP---VR-DMGSWNAMISGYCQSGNAKEALTLS 239
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWD--------TIKKCFESMTSRGNKKYGAVYAV 362
+ ++ D V+++S E G ++ +IK ES NK
Sbjct: 240 NGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK-------- 287
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
L+D++ ++G+ ++ ++ + L+S N ++ AY +AI + Q M
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRD-LISWN---SIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSV 449
I+P+ + L L + S G SV
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSV 370
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 12/308 (3%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ +I G + ++SL ++ G +L S + L+ G++ +++
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM------LIYAIHG 343
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
YC LK + ++ D ++ ++ ++ + G E
Sbjct: 344 YC-LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D S EM+ F PN + I+ G V + +R ++ ++I
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ K G + EA +LF M K+ N VTWN++I + G +ALN+F +M G+
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKK----NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGIT 518
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSR-GNKKYGAVYAVLVDIFGQYGKFQNAEE 378
P P F+ ++ G + F SM R G + YA +VDI G+ G Q A +
Sbjct: 519 PTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQ 578
Query: 379 CVQALKSE 386
++A+ E
Sbjct: 579 FIEAMSIE 586
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 127/329 (38%), Gaps = 53/329 (16%)
Query: 197 RLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLE--------------- 241
R+ED + M K ++ +++ ++ YR N M+ ++ +V
Sbjct: 169 RVEDARKVFDRMPEK----DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTL 224
Query: 242 --------EIRERKISLDTH-------------IYNSIIDTFGKYGELGEALKLFVKMQK 280
E++E ++ + H + I + K G++ LF + +K
Sbjct: 225 LDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK 284
Query: 281 EGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDT 340
P+IV +N++I + G+ +L+LF ++ G V+++ G
Sbjct: 285 ----PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA 340
Query: 341 IKK-CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALA 399
I C +S + +V L ++ + + ++A + E L S N A+
Sbjct: 341 IHGYCLKS----NFLSHASVSTALTTVYSKLNEIESARKLFDE-SPEKSLPSWN---AMI 392
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+ Y Q GL E AI + + M+ PN V + +++A + G V+ ++ +
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
+ T L+ + + E ++ M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLM 481
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 180/429 (41%), Gaps = 52/429 (12%)
Query: 73 EELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEAD 132
EE + E S+ + K + + A+ L M LG Q ++++ + L G +A
Sbjct: 103 EERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAF 162
Query: 133 MLFKEMIYCGLKPRLNL----YNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEIL 188
+F+ M + + N+ Y++ E+ + R ++++
Sbjct: 163 TVFEFM-----RKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREP--KRRSCFDVV 215
Query: 189 L-DYFVS-AGRLEDTWST---INEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
L + +S GR+ + + T MK G YS +V ++ G + A +V +E+
Sbjct: 216 LYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEM 275
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
KISL ++I K + ALK+F M K+G++PN+V N+L
Sbjct: 276 VNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTL---------- 325
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
I+ LG+ GK + K + + S G+K + L
Sbjct: 326 -------------------------INSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNAL 360
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQ-GLCEQAIKVLQIMEGEG 422
+ + ++++ + ++SE + A Q+ G E+A+K+L MEG G
Sbjct: 361 LTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSG 420
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVP 482
+ + N++I+A + + A+ VY H+ + P+ TY +L+++ I +DEV
Sbjct: 421 LTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVE 480
Query: 483 IIYKRMETD 491
I K++E D
Sbjct: 481 DILKKVEPD 489
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/417 (18%), Positives = 167/417 (40%), Gaps = 24/417 (5%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
+P + F S L+ + G++ +A ++ M ++ ++Y+ +++A+ V
Sbjct: 139 QPNAHACNSFLSCLL----RNGDIQKAFTVFEFMRK-KENVTGHTYSLMLKAVAEVKGCE 193
Query: 130 EADMLFKEMIYCGLKPR------LNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRE 183
A +F+E+ +P+ + LYN M G T
Sbjct: 194 SALRMFREL---EREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEI 250
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY +L+ FV GR E +EM ++ W A ++ + +
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSM 310
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
++ + + N++I++ GK G++G K++ ++ G +P+ TWN+L+ + Y
Sbjct: 311 LKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRY 370
Query: 304 TKALNLFSDMQEQGLYP-DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
L LF ++ + L + ++ T + + G W+ K M G + Y +
Sbjct: 371 EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNL 430
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEG 420
++ + K + A + + PN F +L + L ++ +L+
Sbjct: 431 VISACEKSRKSKVALLVYEHMAQRDC--KPNTFTYLSLVRSCIWGSLWDEVEDILK---- 484
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
+EP++ + N I+ + A +Y ++E G+ PD T +++ + +K
Sbjct: 485 -KVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKKHQK 540
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 103/245 (42%), Gaps = 4/245 (1%)
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
AL+LF M+ G++PN NS + R GD KA +F M+++ + ++
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYSLMLK 184
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYG---AVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
+ E ++ + F + ++ +Y + + G+ E + +K +G
Sbjct: 185 AVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDG 244
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
+ + + L + + + G E A+ V M I + +I+A + ++ A+
Sbjct: 245 HIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLAL 304
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
++ + + G+ P+LV TL+ + + K V +Y +++ G PD L AL
Sbjct: 305 KIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTAL 364
Query: 508 TALER 512
R
Sbjct: 365 YKANR 369
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 145/356 (40%), Gaps = 35/356 (9%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYR--D 229
+M + GI TY L+ ++ G ++ K KGF+PN YS + +YR +
Sbjct: 209 DMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRME 268
Query: 230 NGMWKKATEVLEEIRERK-----------------ISLDTHIYNSIIDTFGKY-----GE 267
+GM A E E+RE+ + L+ I ++
Sbjct: 269 DGM--GALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNW 326
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHC-REGDYTKALNLFSDMQEQGLYPDPKIFV 326
LKL M GVRP+ LI W C RE Y L+ ++E+ +
Sbjct: 327 TTRVLKLLNAMDSAGVRPSREEHERLI-WACTREEHYIVGKELYKRIRERFSEISLSVCN 385
Query: 327 TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF-------GQYGKFQNAEEC 379
+I +G+ KW + +E + G + Y ++V F + G ++
Sbjct: 386 HLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRL 445
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+ ++ +G+ + A+ A ++ AI++ + M G +P ++ L++A
Sbjct: 446 LNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEK 505
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
Y EA V++H+ + G+ P+L YTT+ +KF+ + + K M + G P
Sbjct: 506 GKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEP 561
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 132/310 (42%), Gaps = 20/310 (6%)
Query: 182 RETYEILLDYFVSAGRLEDTWST-----INEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
R Y+++ + V +D W+T +N M G +P+ + +++ +
Sbjct: 310 RICYQVMRRWLVK----DDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVG 365
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW------ 290
E+ + IRER + + N +I GK + AL+++ + EG PN +++
Sbjct: 366 KELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSH 425
Query: 291 -NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
N L+ + G + + L + M+++GL P + + ++ + + + F++M
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV 485
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGL 407
G K Y L+ + + A + G+ PN++ +A+ Q
Sbjct: 486 DNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGI--EPNLYAYTTMASVLTGQQK 543
Query: 408 CEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTT 467
+L+ M +GIEP++V N +I+ + G A +H +K V P+ +TY
Sbjct: 544 FNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 468 LMKAFIRTKK 477
L++A K
Sbjct: 604 LIEALANDAK 613
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 35/301 (11%)
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK------ISLDTHIYNSIIDT 261
+K KG P + I G +D + K A V++ ++ +K I + IYNS++
Sbjct: 138 LKDKGELPLQVFCAMIKGFGKDKRL-KPAVAVVDWLKRKKSESGGVIGPNLFIYNSLL-- 194
Query: 262 FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPD 321
G GEA K+ M++EG+ PNIVT+N+L+ + EG++ KAL + +E+G P+
Sbjct: 195 -GAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPN 253
Query: 322 PKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQ 381
P + T + + R GA+ V++ +Y K + +
Sbjct: 254 PITYSTAL-----------------LVYRRMEDGMGAL-EFFVELREKYAKREIGNDVGY 295
Query: 382 ALKSEGVLVSPNIFCALANAYAQQGLCE------QAIKVLQIMEGEGIEPNIVMLNMLIN 435
+ E V + N + ++ L + + +K+L M+ G+ P+ LI
Sbjct: 296 DWEFEFVKLE-NFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIW 354
Query: 436 AFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTP 495
A + Y+ +Y I+E L L+ + KK+ IY+ + +G P
Sbjct: 355 ACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEP 414
Query: 496 D 496
+
Sbjct: 415 N 415
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 111/301 (36%), Gaps = 38/301 (12%)
Query: 32 QFSKIPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGE---ELSSEFYSQLISKCC 88
+FS+I S+ + +W+ K + + E P P EL ++ L+S
Sbjct: 375 RFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAAS 434
Query: 89 KEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLN 148
K G + LL +ME G + + ++ A T+ A +FK M+ G KP
Sbjct: 435 KRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKP--- 491
Query: 149 LYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEM 208
T +Y LL ++ + N M
Sbjct: 492 --------------------------------TVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 209 KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGEL 268
G +PN + Y+ + + + +L+E+ + I +N++I + G
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 269 GEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTI 328
G A + F +M+ E V PN +T+ LI+ + A L Q +GL K + +
Sbjct: 580 GVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAV 639
Query: 329 I 329
+
Sbjct: 640 V 640
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 13/259 (5%)
Query: 247 KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE--GVRPNIVTWNSLIKWHCREGDYT 304
+I LD +NS++ ++G + + +KLF + K RP T+ L+ CR D +
Sbjct: 80 RIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSS 139
Query: 305 -----KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
+ LNL M GL PD + L E G+ D K + +T + +
Sbjct: 140 ISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYT 196
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQI 417
Y L+ + E V ++ + V P++ F L + +A+ ++
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDD-FDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 418 MEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKK 477
+ G +P+ + N ++ F + EA+ VY +KE GV PD +TY TL+ + +
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 478 FDEVPIIYKRMETDGCTPD 496
+E + K M G PD
Sbjct: 316 VEEARMYLKTMVDAGYEPD 334
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 13/238 (5%)
Query: 70 RPGEELSSEFYSQLISKCCKE-----GNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGN 124
RPG + L+S C+ N+ R ++L+ G + + + +L
Sbjct: 119 RPGRST----FLILLSHACRAPDSSISNVHRVLNLMVNN---GLEPDQVTTDIAVRSLCE 171
Query: 125 VGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS-GIWRTRE 183
GR EA L KE+ P YN EM D +
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV 231
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++ IL+D ++ L + ++++ GF+P+ F+Y+ I+ + +A V +++
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
+E + D YN++I K G + EA M G P+ T+ SL+ CR+G
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 182 RETYEILLDYFVSA--GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R T+ ILL + A + + +N M G +P+ V + G +A ++
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE-GVRPNIVTWNSLIKWHC 298
++E+ E+ DT+ YN ++ K +L + +M+ + V+P++V++ LI C
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 299 REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
+ +A+ L S + G PD ++ TI+ K ++ M G +
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG 406
Y L+ + G+ + A ++ + G + +L N ++G
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 48/300 (16%)
Query: 206 NEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKY 265
+ M+ GF+P++ + ++ D ++ I +K+ + + N++ID + K
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 266 GELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIF 325
G L +A +F M+ ++V+W ++I + G A+ LFS +Q+ GL PD F
Sbjct: 358 GCLEKARDVFENMKSR----DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 326 VTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY-AVLVDIFGQYGKFQNAEECVQALK 384
VT ++ G + + CF+ MT + A +VD+ G+ GK + A +Q +
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMS 473
Query: 385 SE---------------------GVLVSPNIF----------CALANAYAQQGLCEQAIK 413
E G+L + +F L+N YA+ G E+
Sbjct: 474 MEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTN 533
Query: 414 VLQIMEGEGIEPNI----VMLNMLINAFSNAGR--------YMEAMSVYHHIKESGVSPD 461
+ IM+ +G++ N V +N +I+ F R Y E + +KE G PD
Sbjct: 534 IRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPD 593
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/255 (18%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 247 KISLDTHIY--NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYT 304
K+ L + ++ N ++ +GK G L EA + +M R ++V+WNSL+ + + +
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS----RRDVVSWNSLVVGYAQNQRFD 223
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
AL + +M+ + D +++ + + + + M + KK + V++
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY--VKDMFFKMGKKSLVSWNVMI 281
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
++ + A E ++++G ++ A K+ +E + +
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
PN+++ N LI+ ++ G +A V+ ++K S D+V++T ++ A+ + + + +
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMK----SRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 485 YKRMETDGCTPDRKA 499
+ +++ G PD A
Sbjct: 398 FSKLQDSGLVPDSIA 412
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 119/292 (40%), Gaps = 17/292 (5%)
Query: 207 EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATE--VLEEIRERKISLDTHIYNSIIDTFGK 264
E+ K Q F+ +++ Y D + +LE++R ++ + ++ +
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLR-----CNSSLGVKLMRAYAS 86
Query: 265 YGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKI 324
++ A K+F ++ + N++ N +I+ + G Y + + +F M + PD
Sbjct: 87 LKDVASARKVFDEIPER----NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYT 142
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALK 384
F ++ G +K S T G V LV ++G+ G A + +
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202
Query: 385 SEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYM 444
V VS N +L YAQ + A++V + ME I + + L+ A SN
Sbjct: 203 RRDV-VSWN---SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTE- 257
Query: 445 EAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
M V + G LV++ ++ +++ E +Y RME DG PD
Sbjct: 258 NVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPD 308
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 149/367 (40%), Gaps = 59/367 (16%)
Query: 179 WRTR-ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKAT 237
WR E +L+D E W + M G Q KIV WK+A+
Sbjct: 178 WRNEGEAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQAS 237
Query: 238 EVL---------------------------------------EEIRERKISLDTHIYNSI 258
V+ + + +R++ D Y+ I
Sbjct: 238 AVVHWVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCI 297
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVR---------------PNIVTWNSLIKWHCREGDY 303
T G+ G L E LK+ +M+++ + P++V +N+++ C
Sbjct: 298 AVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILN-ACVPTLQ 356
Query: 304 TKALN-LFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
KA++ +F ++++ GL P+ + + + E GK+D + F M S G Y V
Sbjct: 357 WKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKV 416
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQG-LCEQAIKVLQIMEGE 421
LV + GK + A E V+ ++ +GV+ + +++ LA G C+ ++V ++ E
Sbjct: 417 LVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLE 476
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
P + LI A N G + M+++ ++K+ P++ T ++K + R F E
Sbjct: 477 NCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDK-CDPNIGTANMMLKVYGRNDMFSEA 535
Query: 482 PIIYKRM 488
+++ +
Sbjct: 536 KELFEEI 542
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 155/352 (44%), Gaps = 65/352 (18%)
Query: 218 FVYSKIVGLYRDNGMWKKATEVLE----EIRERKISLDTHIYNSIIDTFGKYGELGEALK 273
FVY+K++ + G ++ E L+ + +R++ D Y+ I T G+ G L E LK
Sbjct: 256 FVYTKLLSVL---GFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLK 312
Query: 274 LFVKMQKEGVR---------------PNIVTWNSLIKWHCREGDYTKALN-LFSDMQEQG 317
+ +M+++ + P++V +N+++ C KA++ +F ++++ G
Sbjct: 313 VIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILN-ACVPTLQWKAVSWVFVELRKNG 371
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
L P+ + + + E GK+D + F M S G Y VLV + GK + A
Sbjct: 372 LRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAV 431
Query: 378 ECVQALKSEGVLVSPNIF----CALAN--------------------------------A 401
E V+ ++ +GV+ + +++ C L N A
Sbjct: 432 EAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAA 491
Query: 402 YAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI---KESGV 458
G + + + Q M+ + +PNI NM++ + + EA ++ I KE+ +
Sbjct: 492 SLNGGHVDDCMAIFQYMK-DKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHL 550
Query: 459 SPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDR-KAKQMLQDALTA 509
P+ TY+ +++A R+ +++ +Y+ M G D+ K ML +A A
Sbjct: 551 VPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRA 602
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 121/291 (41%), Gaps = 15/291 (5%)
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
+F E+ GL+P Y + +M SG TY++L+
Sbjct: 363 VFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALW 422
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKAT-EV-----LEEIRERK 247
G++E+ + +M+ KG VY ++ +NG W A EV LE R +
Sbjct: 423 REGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLE 482
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
I+ I S+ G + + + +F M K+ PNI T N ++K + R +++A
Sbjct: 483 ITFTGLIAASL-----NGGHVDDCMAIFQYM-KDKCDPNIGTANMMLKVYGRNDMFSEAK 536
Query: 308 NLFSDM---QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
LF ++ +E L P+ + ++ +W+ + +++M G + +A ++
Sbjct: 537 ELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASML 596
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
+ GK+ E A+ +G + P F L +G ++AI ++
Sbjct: 597 IEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLI 647
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY---GAVYAVLVDIFGQ 369
M + GL + I+ LG + W + S +K+ VY L+ + G
Sbjct: 208 MNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGF 267
Query: 370 YGKFQNAEECV-QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG------ 422
+ Q A + Q L + + +A Q GL ++ +KV++ M +
Sbjct: 268 ARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKN 327
Query: 423 ---------IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
+EP++V+ N ++NA ++ V+ ++++G+ P+ TY M+ +
Sbjct: 328 LRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVML 387
Query: 474 RTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
+ KFD V +++M++ G P ++L AL
Sbjct: 388 ESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRAL 421
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIV---GLYRD--NGMWKKA---TEV 239
L+ FV+ R D EM+ G + N + ++ G +D G W
Sbjct: 179 LISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG 238
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ + K+ + + S+ID + K G+L A LF M + +V+WNS+I + +
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER----TLVSWNSIITGYSQ 294
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
GD +AL +F DM + G+ PD F+++I QG + ++ G K A+
Sbjct: 295 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 354
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
LV+++ + G ++A++ + L+ + + + LA+ G +A+ + Q M+
Sbjct: 355 VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLAS----HGHGNEALSIFQRMQ 410
Query: 420 GEG-IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKE-SGVSPDLVTYTTLMKAFIRTKK 477
+G P+ + ++ A S+ G E + +++ G+ P + Y ++ R +
Sbjct: 411 EKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGR 470
Query: 478 FDEVPIIYKRM 488
F+E + K M
Sbjct: 471 FEEAERLVKTM 481
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 119/291 (40%), Gaps = 16/291 (5%)
Query: 207 EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG 266
EM KG+ P+ F + ++ + + V + + ++ ++ ++ + G
Sbjct: 97 EMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
E+ L++F + + N+V W SLI ++ A+ F +MQ G+ + I V
Sbjct: 157 EVNYGLRVFEDIPQW----NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMV 212
Query: 327 TIISCLGE-----QGKW--DTIKKCFESMTSRGNKKYGAVYAV-LVDIFGQYGKFQNAEE 378
++ G GKW ++ + + + A L+D++ + G + A
Sbjct: 213 DLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARY 272
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
+ E LVS N ++ Y+Q G E+A+ + M GI P+ V +I A
Sbjct: 273 LFDGMP-ERTLVSWN---SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASM 328
Query: 439 NAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
G S++ ++ ++G D L+ + +T + ++ +E
Sbjct: 329 IQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE 379
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 109/230 (47%), Gaps = 6/230 (2%)
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
G+ ++ W +M +G + F YS + + +G KA ++ +E++ R++ LD Y
Sbjct: 206 GKCKEYW---KKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAY 262
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N++I G + +++F +M++ G PN+ T N++IK C +G A + +M +
Sbjct: 263 NTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 322
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
+G PD ++ + S L + + I F M G + Y +L+ F ++G Q
Sbjct: 323 RGCQPDSITYMCLFSRLEKPSE---ILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQP 379
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEP 425
+ +K G + A+ +A Q+G+ + A + + M G+ P
Sbjct: 380 VLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
+T I+N I+ + K G G+ + + KM EGV ++ +++ + C+ G KA+ L+
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+M+ + + D + T+I +G + + F M RG + A + ++ + +
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
G+ ++A + + G + L + + + + + M G+ P +
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTY 364
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
ML+ F G + V+ +KESG +PD Y ++ A I+ D + M
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIE 424
Query: 491 DGCTPDRKAK 500
G +P R+ +
Sbjct: 425 RGLSPRRRPE 434
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 127/348 (36%), Gaps = 75/348 (21%)
Query: 233 WKKATEVLEEI-RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM--QKEGVRPNIVT 289
W+KA E + RE T +N +ID GKY E + L +M E V PN VT
Sbjct: 61 WQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESV-PNHVT 119
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQ-------------- 335
+ + K + +A++ + + + L D F ++ L E
Sbjct: 120 FRIVFKRYVTAHLVQEAIDAYDKLDDFNL-RDETSFYNLVDALCEHKHVVEAEELCFGKN 178
Query: 336 ------------------------GKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
G W K+ ++ M + G K Y++ +DI + G
Sbjct: 179 VIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSG 238
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
K A + + +KS + + + + A E I+V + M G EPN+ N
Sbjct: 239 KPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHN 298
Query: 432 MLINAFSNAGR----------------------YM----------EAMSVYHHIKESGVS 459
+I GR YM E +S++ + SGV
Sbjct: 299 TIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVR 358
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
P + TY LM+ F R V ++K M+ G TPD A + DAL
Sbjct: 359 PKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDAL 406
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 38/251 (15%)
Query: 102 QMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXX 161
+M+ G +SY+ ++ + G+ +A L+KEM +K + YN
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 162 XXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYS 221
EM + G T+ ++ GR+ D + ++EM +G QP+S Y
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYM 333
Query: 222 KIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE 281
+ F + + E L LF +M +
Sbjct: 334 CL--------------------------------------FSRLEKPSEILSLFGRMIRS 355
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI 341
GVRP + T+ L++ R G L ++ M+E G PD + +I L ++G D
Sbjct: 356 GVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMA 415
Query: 342 KKCFESMTSRG 352
++ E M RG
Sbjct: 416 REYEEEMIERG 426
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 141/311 (45%), Gaps = 30/311 (9%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
T+ LL F + L T ++ + G + FV + ++ +Y G + A V ++
Sbjct: 63 HTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDD 122
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
S D +NS+++ + K G + +A KLF +M + N+++W+ LI + G
Sbjct: 123 ----SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER----NVISWSCLINGYVMCGK 174
Query: 303 YTKALNLFSDMQ-----EQGLYPDPKIFVTIISCLG-----EQGKWDTIKKCFESMTSRG 352
Y +AL+LF +MQ E + P+ T++S G EQGKW + +
Sbjct: 175 YKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW------VHAYIDKY 228
Query: 353 NKKYGAVYA-VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
+ + V L+D++ + G + A+ AL S+ + + + A+ A GL ++
Sbjct: 229 HVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKA---YSAMICCLAMYGLTDEC 285
Query: 412 IKVL-QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH-HIKESGVSPDLVTYTTLM 469
++ ++ + I PN V ++ A + G E S + I+E G++P + Y ++
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMV 345
Query: 470 KAFIRTKKFDE 480
+ R+ E
Sbjct: 346 DLYGRSGLIKE 356
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 126/287 (43%), Gaps = 14/287 (4%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKG-----FQPNSFVYSKIVGLYRDNGMWK 234
R ++ L++ +V G+ ++ EM++ +PN F S ++ G +
Sbjct: 157 RNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALE 216
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLI 294
+ V I + + +D + ++ID + K G L A ++F + G + ++ ++++I
Sbjct: 217 QGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL---GSKKDVKAYSAMI 273
Query: 295 KWHCREGDYTKALNLFSDMQ-EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR-G 352
G + LFS+M + P+ FV I+ +G + K F+ M G
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAI 412
Y +VD++G+ G + AE + ++ E ++ + + CE A+
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 413 KVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
K +++E + + +L L N ++ GR+ME + H ++ G++
Sbjct: 394 K--RLIELDPMNSGAYVL--LSNVYAKTGRWMEVKCIRHEMEVKGIN 436
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 125/313 (39%), Gaps = 18/313 (5%)
Query: 116 THLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVD 175
H I G++ + A+ +F + P + ++N M
Sbjct: 40 AHFISICGSLSNSDYANRVFSHI----QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKS 95
Query: 176 SGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK 235
GIW TY LL S L E+ GF + +V LY G
Sbjct: 96 RGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGD 155
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
A +V +E+ ER + ++N +I F G++ L LF +M + +IV+WNS+I
Sbjct: 156 AQKVFDEMSERNVV----VWNLMIRGFCDSGDVERGLHLFKQMSER----SIVSWNSMIS 207
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG-NK 354
+ G +AL LF +M +QG PD VT++ G DT K + S G K
Sbjct: 208 SLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFK 267
Query: 355 KYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKV 414
+ V LVD + + G + A + ++ V VS N L + A G E I +
Sbjct: 268 DFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV-VSWN---TLISGSAVNGKGEFGIDL 323
Query: 415 LQIMEGEG-IEPN 426
M EG + PN
Sbjct: 324 FDAMIEEGKVAPN 336
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 92/212 (43%), Gaps = 8/212 (3%)
Query: 285 PNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKC 344
PN++ +N++IK + G ++L+ FS M+ +G++ D + ++ K
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 124
Query: 345 FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ 404
+ G + G + +V+++ G+ +A++ + V+V + + +
Sbjct: 125 HGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVV----WNLMIRGFCD 180
Query: 405 QGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVT 464
G E+ + + + M E +IV N +I++ S GR EA+ ++ + + G PD T
Sbjct: 181 SGDVERGLHLFKQMS----ERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT 236
Query: 465 YTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
T++ D I+ E+ G D
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESSGLFKD 268
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 10/290 (3%)
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
+DS + + ILL+ + + +L+ EMK +P Y ++ Y
Sbjct: 242 MDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRV 301
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
+ A EVLEE++ ++ ++ ++N IID G+ G L EAL + + P IVT+NSL
Sbjct: 302 QIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSL 361
Query: 294 IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN 353
+K C+ GD A + M +G+ P + + K + + + G+
Sbjct: 362 VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 354 KKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA--LANAYAQQGLCEQA 411
Y +++ + + GK A + + +K+ G + P++ L + + + E+A
Sbjct: 422 SPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRG--IDPDLLTTTMLIHLLCRLEMLEEA 479
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAG------RYMEAMSVYHHIKE 455
+ GI P + M+ N + G R MS H K+
Sbjct: 480 FEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKK 529
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 35/260 (13%)
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
I+N +++ + + +L +A KL+ +M+ V+P +VT+ +LI+ +CR A+ +
Sbjct: 250 VRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLE 309
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
+M+ + + +F II LGE G+ L + G
Sbjct: 310 EMKMAEMEINFMVFNPIIDGLGEAGR-------------------------LSEALGMME 344
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
+F E S +V+ N +L + + G A K+L++M G++P N
Sbjct: 345 RFFVCE-------SGPTIVTYN---SLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
FS + E M++Y + E+G SPD +TY ++K K + K M+
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 492 GCTPDRKAKQMLQDALTALE 511
G PD ML L LE
Sbjct: 455 GIDPDLLTTTMLIHLLCRLE 474
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 110/287 (38%), Gaps = 36/287 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y LI C+ + AM +L +M+ +++ + +I+ LG GR SEA + +
Sbjct: 288 YGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFF 347
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
C P T TY L+ F AG L
Sbjct: 348 VCESGP-----------------------------------TIVTYNSLVKNFCKAGDLP 372
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M +G P + Y+ + + ++ + ++ E S D Y+ I+
Sbjct: 373 GASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+ G+L A+++ +M+ G+ P+++T LI CR +A F + +G+
Sbjct: 433 KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGII 492
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN-KKYGAVYAVLVD 365
P F I + L +G D K+ M+S + KK Y VD
Sbjct: 493 PQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTYREAVD 539
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 122/279 (43%), Gaps = 6/279 (2%)
Query: 211 KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE 270
K FQ + V + ++ +Y WK A V E+++ + + +NS+I G+
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLIS---WNSVISGMMINGQHET 316
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
A++LF K+ EG++P+ TWNSLI + G +A F M + P K +++S
Sbjct: 317 AVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLS 376
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
+ K+ + ++ V L+D++ + G A + +
Sbjct: 377 ACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP--K 434
Query: 391 SPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
P + + + Y + G CE AI++ +++ E +EP++ +++A S+ G + ++
Sbjct: 435 DPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIF 494
Query: 451 HHIKES-GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
++E G P ++ R+ + E + +M
Sbjct: 495 RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 107/270 (39%), Gaps = 38/270 (14%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ +IS G + A+ L ++++ G + S ++ LI +G+ EA F+ M+
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P L S IW + EI + + A
Sbjct: 361 SVVMVPSLKCLTSLLSAC------------------SDIWTLKNGKEIH-GHVIKAAAER 401
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D FV + ++ +Y G+ A + + + D +N +I
Sbjct: 402 DI----------------FVLTSLIDMYMKCGLSSWARRIFDRFEPKP--KDPVFWNVMI 443
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ-GL 318
+GK+GE A+++F +++E V P++ T+ +++ G+ K +F MQE+ G
Sbjct: 444 SGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGY 503
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESM 348
P + +I LG G+ K+ + M
Sbjct: 504 KPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 134/317 (42%), Gaps = 21/317 (6%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMK--GFQPNSFVYSKIVGLYRDNGMWKKAT 237
R ++ L+ + G L + ++ M + GF+PN + ++ G ++
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 238 EVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWH 297
+ + + + + + N+ I+ +GK G+L + KLF + + N+V+WN++I H
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK----NLVSWNTMIVIH 210
Query: 298 CREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYG 357
+ G K L F+ + G PD F+ ++ + G + + G
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNK 270
Query: 358 AVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQI 417
+ L+D++ + G+ +++ + S + + A+ AYA G AIK ++
Sbjct: 271 CITTALLDLYSKLGRLEDSSTVFHEITSPDSMA----WTAMLAAYATHGFGRDAIKHFEL 326
Query: 418 MEGEGIEPNIVMLNMLINAFSNAG------RYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
M GI P+ V L+NA S++G Y E MS K + P L Y+ ++
Sbjct: 327 MVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMS-----KRYRIDPRLDHYSCMVDL 381
Query: 472 FIRTKKFDEVPIIYKRM 488
R+ + + K M
Sbjct: 382 LGRSGLLQDAYGLIKEM 398
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 2/209 (0%)
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
GI ETY ++ F +G ++S + EM+ KG +PNS + ++ + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
+VL +++R +++ YN I + K + EA L M G++PN VT++ LI
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 297 HCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDT-IKKCFESMTSRGNKK 355
C E D+ +A LF M +G PD + + T+I L + G ++T + C ESM
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALK 384
+ ++ LV+ + K + A+E + +K
Sbjct: 362 F-SIMKSLVNGLAKDSKVEEAKELIGQVK 389
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 113/259 (43%), Gaps = 1/259 (0%)
Query: 224 VGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE-G 282
+ LY M + V ++ + +IS N+++ + EA +++++M K G
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 283 VRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIK 342
+ P++ T+N +IK C G + + ++ ++M+ +G+ P+ F +IS + K D +
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 343 KCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAY 402
K M RG + Y + + + K + A+ + + S G+ + + L + +
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 403 AQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDL 462
+ E+A K+ +IM G +P+ LI G + A+S+ E P
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 463 VTYTTLMKAFIRTKKFDEV 481
+L+ + K +E
Sbjct: 363 SIMKSLVNGLAKDSKVEEA 381
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 96/239 (40%), Gaps = 36/239 (15%)
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ-G 317
I + + L +L++F ++K + + + N+L+ DY +A ++ +M + G
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
+ PD + + +I E G + M +G K + + +++ F
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGF---------- 232
Query: 378 ECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAF 437
YA+ ++ KVL +M+ G+ + N+ I +
Sbjct: 233 ------------------------YAEDK-SDEVGKVLAMMKDRGVNIGVSTYNIRIQSL 267
Query: 438 SNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+ EA ++ + +G+ P+ VTY+ L+ F F+E ++K M GC PD
Sbjct: 268 CKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 23/316 (7%)
Query: 182 RETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLE 241
R TY + + G+ D + +G + +SF+ + ++ +Y G +A +
Sbjct: 126 RLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFL 185
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
+ I D +NS+I F K G + +A LF +M + N V+WNS+I R G
Sbjct: 186 GM----IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNG 237
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISC---LG--EQGKWDTIKKCFESMTSRGNKKY 356
+ AL++F +MQE+ + PD V++++ LG EQG+W E + +
Sbjct: 238 RFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW-----IHEYIVRNRFELN 292
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
V L+D++ + G + + + + ++ LAN G E+A+ +
Sbjct: 293 SIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN----NGFEERAMDLFS 348
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIRT 475
+E G+EP+ V ++ A +++G A + +KE + P + YT ++
Sbjct: 349 ELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGA 408
Query: 476 KKFDEVPIIYKRMETD 491
+E + K M +
Sbjct: 409 GLLEEAEALIKNMPVE 424
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 131/281 (46%), Gaps = 17/281 (6%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R ++ ++ FV GR +D EM+ K +P+ F ++ G ++ +
Sbjct: 221 RNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWI 280
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
E I + L++ + ++ID + K G + E L +F K+ + WNS+I
Sbjct: 281 HEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK----QLSCWNSMILGLAN 336
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR----GNKK 355
G +A++LFS+++ GL PD F+ +++ G+ + F M + + K
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
+ Y ++V++ G G + AE ++ + E V I+ +L +A + G E A +
Sbjct: 397 H---YTLMVNVLGGAGLLEEAEALIKNMPVEEDTV---IWSSLLSACRKIGNVEMAKRAA 450
Query: 416 QIMEGEGIEPNIVMLNMLI-NAFSNAGRYMEAMSVYHHIKE 455
+ + + ++P+ +L+ NA+++ G + EA+ +KE
Sbjct: 451 KCL--KKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE 489
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%)
Query: 351 RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQ 410
+G K Y ++DIFG+ G+ Q+ +K +GVL+ + +L + + G +
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 411 AIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMK 470
A+++ + M G EP +V + GR EA VY + S VSP+ TYT LM+
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 471 AFIRTKKFDEVPIIYKRMETDGCTPDRKAKQML 503
+ T K +E I+ +M+ G PD+ A +L
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNIL 268
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGM 232
M + G+ TY L+ + S+G ++ EM+ G +P Y+ + + +G
Sbjct: 148 MKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGR 207
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
++ATEV +E+ ++S + H Y +++ G+ EAL +F KMQ+ GV+P+ N
Sbjct: 208 VEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNI 267
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
LI + G+ + + M+E G+ IFV + L G+ D + + S S
Sbjct: 268 LIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHIS 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY +LD F AGR++ +S + MK KG ++ Y+ ++ +G A + EE+
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
R+ Y + + G + EA +++ +M + V PN T+ L+++ G
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 304 TKALNLFSDMQEQGLYPD 321
+AL++F MQE G+ PD
Sbjct: 244 EEALDIFFKMQEIGVQPD 261
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 198 LEDTWSTIN-EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
++ W N ++KGF+ + F Y+ ++ ++ + G + V ++E+ + +DT Y
Sbjct: 102 MQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYT 161
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
S+I G++ A++L+ +M+ G P +V++ + +K +G +A ++ +M
Sbjct: 162 SLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRS 221
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
+ P+ + ++ L GK + F M G + A +L+ ++G+
Sbjct: 222 RVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFM 281
Query: 377 EECVQALKSEGVLVSPNIFC 396
+ +K GV++ IF
Sbjct: 282 TRVLVYMKENGVVLRYPIFV 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 41/211 (19%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D Y +++D FG+ G + +F M+++GV + VT+ SLI W GD A+ L+
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+M++ G P T++S Y + +
Sbjct: 181 EEMRDNGCEP------TVVS-----------------------------YTAYMKMLFAD 205
Query: 371 GKFQNAEECV-QALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
G+ + A E + L+S VSPN + L G CE+A+ + M+ G++P+
Sbjct: 206 GRVEEATEVYKEMLRSR---VSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDK 262
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
N+LI G V ++KE+GV
Sbjct: 263 AACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/467 (19%), Positives = 175/467 (37%), Gaps = 38/467 (8%)
Query: 47 IRNKVVNSESDT-KTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEA 105
I N+V+ + K LF N A G + Y+ ++ + G + S+ M+
Sbjct: 91 IINRVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKE 150
Query: 106 LGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXX 165
G + + +YT LI + + G A L++EM G +P + Y
Sbjct: 151 KGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEE 210
Query: 166 XXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVG 225
EM+ S + TY +L++Y V+ G+ E+ +M+ G QP+ + ++
Sbjct: 211 ATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIA 270
Query: 226 LYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLF---------- 275
G T VL ++E + L I+ ++T GE + L+
Sbjct: 271 KALKFGETSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLREVNSHISVESLC 330
Query: 276 -----------VKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKI 324
V K +++ L+K + D L + M+++ + D +
Sbjct: 331 SSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDI-----LLNQMRDRNIKLDSFV 385
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALK 384
II ++ + + F+ G + Y L+ F + + E V+
Sbjct: 386 VSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVK--- 442
Query: 385 SEGVLVSPNIFCALANAYAQQ-GLCEQ---AIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
E V ++ C + G + A V ++ + + + L++ + +A
Sbjct: 443 -EMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLLPDD--QKGVAAYTALMDVYISA 499
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD-EVPIIYK 486
G +AM + ++E + P L TY L+ +T F EV ++ K
Sbjct: 500 GSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTSDFQKEVALLRK 546
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 55/115 (47%)
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
+ + + + + G + V +M+ +G+ + V LI+ S++G AM ++ ++
Sbjct: 125 YTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMR 184
Query: 455 ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALTA 509
++G P +V+YT MK + +E +YK M +P+ +L + L A
Sbjct: 185 DNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVA 239
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 170/410 (41%), Gaps = 32/410 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ +IS K A+SL +M A G + ++++ ++ + + S + +I
Sbjct: 92 WTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVI 151
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G + ++ E+ S ++ +++ V A +
Sbjct: 152 KTGFEGN----SVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ +EM G PN F + K++G G+ T + I R I L+ + S++
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKT-IHSNIIVRGIPLNVVLKTSLV 266
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
D + ++ ++ +A+++ ++ ++ W S++ R +A+ F +M+ GL
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQ----DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQ 322
Query: 320 PDPKIFVTIISC--------LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYG 371
P+ + I+S G+Q TIK FE T GN LVD+ Y
Sbjct: 323 PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN--------ALVDM---YM 371
Query: 372 KFQNAEECVQALKSEGVLVSPNI--FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVM 429
K +E V+A + G +VSPN+ + L G + +L M +EPN+V
Sbjct: 372 KCSASE--VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429
Query: 430 LNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
L+ ++ A S + ++ ++ V ++V +L+ A+ ++K D
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD 479
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 136/331 (41%), Gaps = 23/331 (6%)
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
FV R ++ T EM+ G QPN+F YS I+ L ++ + +
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 252 THIYNSIIDTFGK-YGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
T + N+++D + K EA ++F M V PN+V+W +LI G L
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLL 415
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFE---SMTSRGNKKYGAVYAVLVDIF 367
+M ++ + P+ VT+ L K +++ E + R V LVD +
Sbjct: 416 MEMVKREVEPN---VVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY 472
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNI-FCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
K A ++++K NI + +L + + G E A+ V+ M G+GI +
Sbjct: 473 ASSRKVDYAWNVIRSMKRR-----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMD 527
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
+ L I+A +N G ++ + +SG S +L+ + + ++ +++
Sbjct: 528 QLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Query: 487 RMET------DGCTPDRKAKQMLQDALTALE 511
+ T +G + + AL+A E
Sbjct: 588 EIATPDVVSWNGLVSGLASNGFISSALSAFE 618
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/416 (19%), Positives = 163/416 (39%), Gaps = 20/416 (4%)
Query: 79 FYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEM 138
++ ++S + A+ +M +LG Q ++++Y+ ++ V + +
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQT 351
Query: 139 IYCGLKPRLNLYN-IXXXXXXXXXXXXXXXXXXXEMVDSGI--WRTRETYEILLDYFVSA 195
I G + ++ N + MV + W T L+ V
Sbjct: 352 IKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTT------LILGLVDH 405
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
G ++D + + EM + +PN S ++ ++ E+ + R + + +
Sbjct: 406 GFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVG 465
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
NS++D + ++ A + M++ R NI T+ SL+ G + AL++ + M
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKR---RDNI-TYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
G+ D IS G +T K G +V LVD++ + G ++
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED 581
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
A++ + + + V VS N L + A G A+ + M + EP+ V +L++
Sbjct: 582 AKKVFEEIATPDV-VSWN---GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Query: 436 AFSNAGRYMEAMSVYHHI--KESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
A SN GR + Y + K + P + Y L+ R + +E + + M
Sbjct: 638 ACSN-GRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMH 692
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 12/230 (5%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R TY L+ F G+ E S IN M G + + + + G + +
Sbjct: 491 RDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL 550
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ S + NS++D + K G L +A K+F +E P++V+WN L+
Sbjct: 551 HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF----EEIATPDVVSWNGLVSGLAS 606
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN-KKYGA 358
G + AL+ F +M+ + PD F+ ++S D + F+ M N +
Sbjct: 607 NGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVE 666
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPN--IFCALANAYAQQG 406
Y LV I G+ G+ + A V+ + + PN IF L A +G
Sbjct: 667 HYVHLVGILGRAGRLEEATGVVETMH-----LKPNAMIFKTLLRACRYRG 711
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 126/314 (40%), Gaps = 20/314 (6%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ L+++ + G + A+S++ M G ++ S I A N+G L +
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
G ++ N E+ + ++ L+ S G +
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVV----SWNGLVSGLASNGFIS 611
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE-RKISLDTHIYNSI 258
S EM+MK +P+S + ++ + + E + +++ I Y +
Sbjct: 612 SALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHL 671
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+ G+ G L EA + M ++PN + + +L++ CR Y L+L DM +GL
Sbjct: 672 VGILGRAGRLEEATGVVETMH---LKPNAMIFKTLLR-ACR---YRGNLSLGEDMANKGL 724
Query: 319 Y---PDPKIFVTIISCLGEQGKWDTIKKCFESMT-SRGNKKYGAVYAVLVDIFGQYGKFQ 374
DP +++ + E GK + +K MT R +KK G V++ G+ F
Sbjct: 725 ALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLG---KSTVEVQGKVHSFV 781
Query: 375 NAEECVQALKSEGV 388
+E+ + K+ G+
Sbjct: 782 -SEDVTRVDKTNGI 794
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 26/245 (10%)
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N+++ + K + A KLF +M + W +I + ++ AL+LF +M
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHR----TVFAWTVMISAFTKSQEFASALSLFEEMMA 117
Query: 316 QGLYPDPKIFVTII-SCLGEQG-------KWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
G +P+ F +++ SC G + IK FE GN G + L D++
Sbjct: 118 SGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE-----GNSVVG---SSLSDLY 169
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G+F+ A E +L++ + + +L A + +A++ M G+ PN
Sbjct: 170 SKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR----EALQFYSEMVKAGVPPNE 225
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKF-DEVPIIYK 486
L+ A S G +++ +I G+ ++V T+L+ + + K D V ++
Sbjct: 226 FTFVKLLGASSFLGLEF-GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Query: 487 RMETD 491
E D
Sbjct: 285 SGEQD 289
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 133/282 (47%), Gaps = 16/282 (5%)
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
G +P++ +V + G + A V +I + LD + NS++ + K G+L +
Sbjct: 197 GVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSS 256
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
++F K+ K+ N V+W ++I + R KAL FS+M + G+ P+ VT+ S
Sbjct: 257 ERIFEKIAKK----NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN---LVTLYSV 309
Query: 332 LGEQGKWDTIK--KCFESMTSRG--NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEG 387
L G I+ K R + Y ++ LV+++ + GK + E ++ +
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN 369
Query: 388 VLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
++ + +L + YA +G+ QA+ + + M + I+P+ L I+A NAG
Sbjct: 370 IVA----WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK 425
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
++ H+ + VS + V +L+ + ++ D ++ +++
Sbjct: 426 QIHGHVIRTDVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIK 466
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 10/301 (3%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
L+ + G + +M + +P++F + + + G+ ++ +
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD 435
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
+S D + NS+ID + K G + A +F +++ V VTWNS++ + G+ +A+
Sbjct: 436 VS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV----VTWNSMLCGFSQNGNSVEAI 490
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+LF M L + F+ +I G + K + G K A L+D++
Sbjct: 491 SLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTA-LIDMY 549
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G AE +A+ S ++ ++ NAY G AI M G +PN
Sbjct: 550 AKCGDLNAAETVFRAMSSRSIVSWS----SMINAYGMHGRIGSAISTFNQMVESGTKPNE 605
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
V+ +++A ++G E ++ +K GVSP+ + + R+ E K
Sbjct: 606 VVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKE 665
Query: 488 M 488
M
Sbjct: 666 M 666
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D I S++ +G+ G L +A K+F M VR ++V W++L+ G+ KAL +F
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMP---VR-DLVAWSTLVSSCLENGEVVKALRMF 190
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
M + G+ PD ++++ E G + +T + + L+ ++ +
Sbjct: 191 KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKC 250
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
G ++E + + + + + A+ ++Y + E+A++ M GIEPN+V L
Sbjct: 251 GDLLSSERIFEKIAKKNAVS----WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTL 306
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
++++ G E SV+ + P+ Y +L A +
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRELDPN---YESLSLALV 346
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/493 (20%), Positives = 196/493 (39%), Gaps = 93/493 (18%)
Query: 33 FSKIP--NSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKE 90
F K+P N+++ S + I N E D+ LF R S L++ K
Sbjct: 159 FEKMPERNAVSWSAM-ITGFCQNGEVDSAVVLF------RKMPVKDSSPLCALVAGLIKN 211
Query: 91 GNLDRAMSLLAQMEAL--GFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI-YCG----- 142
L A +L Q +L G + Y+Y LI G G+ A LF ++ CG
Sbjct: 212 ERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGG 271
Query: 143 -LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDT 201
+ R + + D R ++ ++D +V R+ED
Sbjct: 272 EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDA 331
Query: 202 WSTINEMK----------MKGF-----------------QPNSFVYSKIVGLYRDNGMWK 234
++ +EM + G+ + ++ ++ I+ Y N +K
Sbjct: 332 FALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 235 KATEV----------------------------------LEEIRERKISLDTHIYNSIID 260
+A ++ + +I + + D ++N++I
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALIT 451
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
+ + GE+ E+ ++F +M+ ++ ++TWN++I + G+ ++ALNLF M+ G+YP
Sbjct: 452 MYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYP 508
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN-KKYGAVYAVLVDIFGQYGKFQNAEEC 379
FV++++ G D K F SM S + Y+ LV++ G+F+ A
Sbjct: 509 SHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYI 568
Query: 380 VQALKSEGVLVSPNIFCALANA---YAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+ ++ E ++ AL +A Y GL A + + +E E P +++ NM
Sbjct: 569 ITSMPFEP---DKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNM---- 621
Query: 437 FSNAGRYMEAMSV 449
+++ G + EA V
Sbjct: 622 YADMGLWDEASQV 634
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 109/254 (42%), Gaps = 17/254 (6%)
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
E RER + +NS+I + K G++ A LF +M+ + ++WN++I +
Sbjct: 272 EFRER-FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVS 326
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
A LFS+M + D + ++S G + + FE + + ++ A
Sbjct: 327 RMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIA 382
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
+ + ++ A + + EG P+ +L +A +++ QI+
Sbjct: 383 A----YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT 438
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
I P++ + N LI +S G ME+ ++ +K + +++T+ ++ + E
Sbjct: 439 VI-PDVPVHNALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEA 494
Query: 482 PIIYKRMETDGCTP 495
++ M+++G P
Sbjct: 495 LNLFGSMKSNGIYP 508
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 35/261 (13%)
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIY 255
G E+ EM+ G P+ + ++ + ++ + I LD
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N++ID + K G++ + ++F +M++ R N+V+WNSLI + + G AL +F M++
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR-GNKKYGAVYAVLVDIFGQYGKFQ 374
+ PD F+ +++ GK +K FE M + G + A +VD+ G++G Q
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQ 887
Query: 375 NAEECVQA--LKSEGVLVS-----------------------------PNIFCALANAYA 403
A++ ++A LK + L S + + L+N YA
Sbjct: 888 EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYA 947
Query: 404 QQGLCEQAIKVLQIMEGEGIE 424
QG E+A + ++M G++
Sbjct: 948 SQGCWEKANALRKVMRDRGVK 968
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N+I+D + K ++ A K F ++K+ + WNS++ + G K L F + E
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLEKD-----VTAWNSMLSMYSSIGKPGKVLRSFVSLFE 153
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
++P+ F ++S + + ++ SM G ++ LVD++ + + +
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 376 AEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
A + +V PN C L + Y + GL E+A+ V + M EG P+ + +
Sbjct: 214 ARRVFEW------IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV 267
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
IN + G+ +A ++ + SPD+V + ++
Sbjct: 268 INTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISG 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD-T 252
S LE+ EM +G P+ ++ IV T+ +I +R S +
Sbjct: 606 SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 253 HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
++ S++ + + EA LF ++ +IV W ++ H + G Y +AL + +
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSP---KSIVLWTGMMSGHSQNGFYEEALKFYKE 722
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
M+ G+ PD FVT++ + + + L+D++ + G
Sbjct: 723 MRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGD 782
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
+ + + ++ +VS N +L N YA+ G E A+K+ M I P+ +
Sbjct: 783 MKGSSQVFDEMRRRSNVVSWN---SLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 839
Query: 433 LINAFSNAGRYMEAMSVY 450
++ A S+AG+ + ++
Sbjct: 840 VLTACSHAGKVSDGRKIF 857
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 143/325 (44%), Gaps = 44/325 (13%)
Query: 207 EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG 266
+MK G+ + F ++ ++ + + ++ I ++K++ + + N+++D + K G
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 267 ELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFV 326
L +A ++F +M R N VTWN++I + ++ + ++A +LF M G+ D
Sbjct: 478 ALEDARQIFERMCD---RDN-VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533
Query: 327 -TIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKS 385
T+ +C G + K+ G + + L+D++ + G ++A + +L
Sbjct: 534 STLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP- 591
Query: 386 EGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA--------- 436
E +VS N AL Y+Q L E+A+ + Q M G+ P+ + ++ A
Sbjct: 592 EWSVVSMN---ALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 437 ------------FSNAGRYMEAMSVYHHIKESGV-----------SP-DLVTYTTLMKAF 472
FS+ G Y+ + ++ G+ SP +V +T +M
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 473 IRTKKFDEVPIIYKRMETDGCTPDR 497
+ ++E YK M DG PD+
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQ 732
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/417 (18%), Positives = 164/417 (39%), Gaps = 51/417 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
+S ++S C +E N++ + M +G + +SY L++ R S+A +F+ ++
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
P ++ W L +V AG E
Sbjct: 223 ----DP-----------------------------NTVCWTC------LFSGYVKAGLPE 243
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
+ M+ +G +P+ + ++ Y G K A + E+ S D +N +I
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMI 299
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
GK G A++ F M+K V+ T S++ + L + ++ + GL
Sbjct: 300 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 359
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
+ + +++S + K + K FE++ + + + A ++ + G+ E
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA----MIRGYAHNGESHKVMEL 415
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
+KS G + F +L + A E + I+ + + N+ + N L++ ++
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G +A ++ E D VT+ T++ ++++ + E ++KRM G D
Sbjct: 476 CGALEDARQIF----ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 122/286 (42%), Gaps = 39/286 (13%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
PN F +S ++ + ++ + + + +++ +++D + K + +A ++
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
F + V PN V W L + + G +A+ +F M+++G PD FVT+I+
Sbjct: 218 FEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Query: 335 QGKWDTIKKCFESMTS----------RGNKKYG------------------AVYAVLVDI 366
GK + F M+S G+ K G + + L +
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 367 FGQYGKFQNAE-ECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGI 423
G N + V ++ + ++ NI+ +L + Y++ E A KV + +E
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE---- 389
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
E N V N +I +++ G + M ++ +K SG + D T+T+L+
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/467 (19%), Positives = 182/467 (38%), Gaps = 35/467 (7%)
Query: 27 HATAIQFSKIPNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISK 86
HA AI+ +SN+++ + +V+ S + + + EE + F++ +I
Sbjct: 350 HAEAIKLGL------ASNIYVGSSLVSMYSKCEK-MEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 87 CCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPR 146
G + M L M++ G+ + +++T L+ +I L
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 147 LNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTIN 206
L + N M D R T+ ++ +V + +
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCD----RDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 207 EMKMKGFQPN-SFVYSKIVGLYRDNGMWK-KATEVLEEIRERKISLDTHIYNSIIDTFGK 264
M + G + + + S + +G+++ K L + + D H +S+ID + K
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV--KCGLDRDLHTGSSLIDMYSK 576
Query: 265 YGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKI 324
G + +A K+F + + V V+ N+LI + + + +A+ LF +M +G+ P
Sbjct: 577 CGIIKDARKVFSSLPEWSV----VSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEIT 631
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALK 384
F TI+ + + +T RG G + + G Y + E AL
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI--SLLGMYMNSRGMTEAC-ALF 688
Query: 385 SEGVLVSPN---IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAG 441
SE L SP ++ + + ++Q G E+A+K + M +G+ P+ ++ S
Sbjct: 689 SE--LSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 442 RYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIR-------TKKFDEV 481
E +++ I D +T TL+ + + ++ FDE+
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 171/413 (41%), Gaps = 22/413 (5%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y LI C + L+ + + GF + L+ G +A +F EM
Sbjct: 88 YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM- 146
Query: 140 YCGLKPRLNL--YNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGR 197
P +L +N+ EM + + ++ ++ +V +
Sbjct: 147 -----PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY----SWTAMVTGYVKKDQ 197
Query: 198 LEDTWSTINEM-KMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYN 256
E+ + M ++ +PN F S V ++ E+ I + D +++
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
S++D +GK G + EA +F K+ V ++V+W S+I + + + + +LFS++
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKI----VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
P+ F +++ + + K+ MT G Y + LVD++ + G ++A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
+ V LVS + +L AQ G ++A+K ++ G +P+ V +++A
Sbjct: 374 KHVVDGCPKPD-LVS---WTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
Query: 437 FSNAGRYMEAMSVYHHIKESG-VSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
++AG + + ++ I E +S YT L+ R+ +F+++ + M
Sbjct: 430 CTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 126/284 (44%), Gaps = 23/284 (8%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++ ++D + + R + +S +E+ +PN + ++ ++ D + +V +
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 244 RERKISLDTHIY--NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
++ D + + +S++D + K G + A + K P++V+W SLI + G
Sbjct: 346 T--RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK----PDLVSWTSLIGGCAQNG 399
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA-VY 360
+AL F + + G PD FV ++S G + + F S+T + + + Y
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY 459
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALA-----NAYAQQGLCEQAIKVL 415
LVD+ + G+F+ + + + + P+ F + + Y L E+A + L
Sbjct: 460 TCLVDLLARSGRFEQLKSVISEMP-----MKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+E E N V + N ++ AG++ E + ++E GV+
Sbjct: 515 FKIEPE----NPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 138/357 (38%), Gaps = 68/357 (19%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
TY L+ LE+ ++ GF P ++++++ +Y G A +V +E+
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
R D +N +++ + + G L EA KLF +M ++ + +W +++ + ++
Sbjct: 147 PNR----DLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQP 198
Query: 304 TKALNLFSDMQEQGLYPD--PKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV-- 359
+AL L+S MQ P+ P IF I+ KC RG + +G +
Sbjct: 199 EEALVLYSLMQR---VPNSRPNIFTVSIAVAAA-----AAVKCIR----RGKEIHGHIVR 246
Query: 360 ---------YAVLVDIFGQYGKFQNAEECVQALKSEGVLV-------------------- 390
++ L+D++G+ G A + + V+
Sbjct: 247 AGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSL 306
Query: 391 ---------SPN--IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSN 439
PN F + NA A E +V M G +P + L++ ++
Sbjct: 307 FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 440 AGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G A H+ + PDLV++T+L+ + + DE + + G PD
Sbjct: 367 CGNIESA----KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 128/283 (45%), Gaps = 16/283 (5%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
P+++ ++ ++ D + V LDT++ +++ + K G++ A ++
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
F +M ++ +IV WNSL+ + G +A+ +F M+E G PD FV+++S +
Sbjct: 165 FDRMPEK----SIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 335 QGKWDTIKKCFESMTSRG---NKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
G + + S G N K G L++++ + G A E +K V
Sbjct: 221 TGAVSLGSWVHQYIISEGLDLNVKLGTA---LINLYSRCGDVGKAREVFDKMKETNVAA- 276
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGE-GIEPNIVMLNMLINAFSNAGRYMEAMSVY 450
+ A+ +AY G +QA+++ ME + G PN V +++A ++AG E SVY
Sbjct: 277 ---WTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVY 333
Query: 451 HHIKES-GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
+ +S + P + + ++ R DE +++ G
Sbjct: 334 KRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATG 376
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 175/426 (41%), Gaps = 39/426 (9%)
Query: 95 RAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXX 154
R+ SLL ++ L + +YTHL+ + D LF +I K RL L+ +
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLL----FLSVPLPDDFLFNSVIKSTSKLRLPLHCV-- 92
Query: 155 XXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQ 214
M+ S + + T+ ++ L + GF
Sbjct: 93 -------------AYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG 139
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
+++V + +V Y G + A +V + + E+ I +NS++ F + G EA+++
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIV----AWNSLVSGFEQNGLADEAIQV 195
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
F +M++ G P+ T+ SL+ + G + + + +GL + K+ +I+
Sbjct: 196 FYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSR 255
Query: 335 QGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNI 394
G ++ F+ M + A + ++ +G +G Q A E ++ + + N+
Sbjct: 256 CGDVGKAREVFDKM----KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 395 -FCALANAYAQQGLCEQAIKVLQIMEGE-----GIEPNIVMLNMLINAFSNAGRYMEAMS 448
F A+ +A A GL E+ V + M G+E ++ M++ML AG EA
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML----GRAGFLDEAYK 367
Query: 449 VYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDALT 508
H + +G + +T ++ A + +D I KR+ PD ++ +
Sbjct: 368 FIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL--IALEPDNPGHHVMLSNIY 425
Query: 509 ALERRS 514
AL ++
Sbjct: 426 ALSGKT 431
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 133/302 (44%), Gaps = 6/302 (1%)
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
+D I+ T I++ GRL++ ++ + K P+ V + +V +
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 285
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSL 293
+++ +L+ + + + +DT Y+ ++ K G+L A K+F +M + G N +
Sbjct: 286 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF 345
Query: 294 IKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDT--IKKCFESMTSR 351
++ C +GD +A L S+M+E G+ P + F +I G W+ ++ C E M +R
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFG-WEEKGLEYC-EVMVTR 403
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G + + +V + A E + +G + + + L + + +QA
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHI-KESGVSPDLVTYTTLMK 470
+K+ ME + P + LI G+ +EA Y I K+ + P+ Y L+K
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGK-VEAGEKYLKIMKKRLIEPNADIYDALIK 522
Query: 471 AF 472
AF
Sbjct: 523 AF 524
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 6/253 (2%)
Query: 249 SLDTHIYNS------IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
++D IY + +I K G L E + L ++ + P+++ SL+ E
Sbjct: 225 AIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMR 284
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
++++L + + + D + ++ ++G + +K F+ M RG VY V
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
V + + G + AE + ++ GV F L +A+ G E+ ++ ++M G
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRG 404
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVP 482
+ P+ N ++ + S A + + G PD TY+ L++ FI D+
Sbjct: 405 LMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQAL 464
Query: 483 IIYKRMETDGCTP 495
++ ME +P
Sbjct: 465 KLFYEMEYRKMSP 477
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 109/270 (40%)
Query: 81 SQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIY 140
+ L+ + +E ++ +MSLL ++ + + Y+ ++ A G A +F EM+
Sbjct: 273 TSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQ 332
Query: 141 CGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLED 200
G +Y + EM +SG+ ET+ L+ F G E
Sbjct: 333 RGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEK 392
Query: 201 TWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIID 260
M +G P+ ++++V +A E+L + ++ D H Y+ +I
Sbjct: 393 GLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIR 452
Query: 261 TFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYP 320
F + ++ +ALKLF +M+ + P + SLI C G M+++ + P
Sbjct: 453 GFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEP 512
Query: 321 DPKIFVTIISCLGEQGKWDTIKKCFESMTS 350
+ I+ +I + G + + M S
Sbjct: 513 NADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 119/295 (40%)
Query: 83 LISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG 142
+I CKEG L + LL ++ S T L+ + R E+ L K ++
Sbjct: 240 MIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKN 299
Query: 143 LKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTW 202
+ Y+I EM+ G Y + + G +++
Sbjct: 300 MVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAE 359
Query: 203 STINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTF 262
++EM+ G P ++ ++G + G +K E E + R + +N ++ +
Sbjct: 360 RLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSV 419
Query: 263 GKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDP 322
K + A ++ K +G P+ T++ LI+ D +AL LF +M+ + + P
Sbjct: 420 SKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGF 479
Query: 323 KIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
++F ++I L GK + +K + M R + +Y L+ F + G NA+
Sbjct: 480 EVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNAD 534
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 2/213 (0%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
E + G +S Y+ + CC++G++ A LL++ME G ++ LI G
Sbjct: 329 EMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFG 388
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYE 186
+ + M+ GL P + +N + +D G TY
Sbjct: 389 WEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYS 448
Query: 187 ILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVY-SKIVGLYRDNGMWKKATEVLEEIRE 245
L+ F+ ++ EM+ + P V+ S IVGL G + + L+ +++
Sbjct: 449 HLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLC-TCGKVEAGEKYLKIMKK 507
Query: 246 RKISLDTHIYNSIIDTFGKYGELGEALKLFVKM 278
R I + IY+++I F K G+ A +++ +M
Sbjct: 508 RLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 75 LSSEFYSQLISKCCK-EGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADM 133
L F + LI+ CK +G + A +L + + ++ +I +L + +A
Sbjct: 334 LPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKA 393
Query: 134 LFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFV 193
L +MI G P ++N+ ++
Sbjct: 394 LLLDMISKGPAPGNAVFNL-----------------------------------VVHACS 418
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
G L++ + M+ +G +P+ + Y+ I+ Y GM +A E+L E +++ L
Sbjct: 419 KTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV 478
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG-DYTKALNLFSD 312
Y+++I + K E EALKL +M + GV+PN +N LI+ C + D+ KA LF +
Sbjct: 479 TYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEE 538
Query: 313 MQEQGLY 319
M+++GL+
Sbjct: 539 MKQKGLH 545
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 142/350 (40%), Gaps = 37/350 (10%)
Query: 117 HLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDS 176
LI G +G++ A +F + G P Y + +M+ S
Sbjct: 236 ELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKS 295
Query: 177 GIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQ-PNSFVYSKIVGLYRDNGMWKK 235
G+ E ++ +F G+ E+ +S K K P FV + I L +++G
Sbjct: 296 GVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITF 355
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
A E+L ++ GEA ++ G++P ++ +I
Sbjct: 356 AQEMLGDLS------------------------GEA-------RRRGIKP----FSDVIH 380
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
CR + A L DM +G P +F ++ + G D K+ + M SRG K
Sbjct: 381 SLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKP 440
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
Y V++ + + G A+E + K + +SP + AL Y + ++A+K+L
Sbjct: 441 DVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLL 500
Query: 416 QIMEGEGIEPNIVMLNMLINAFS-NAGRYMEAMSVYHHIKESGVSPDLVT 464
M+ G++PN N LI +F A + +A ++ +K+ G+ + ++
Sbjct: 501 NEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 142/337 (42%), Gaps = 47/337 (13%)
Query: 202 WSTINEMKMKGFQPNSFVYSKIVGLYRDN------GMWKKATEVLEEIRERKISLDTHIY 255
W+T NE + S V S +V + D G+W E+ E +E L+ I
Sbjct: 180 WATQNE---EITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGE--KESCGVLNLEIL 234
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTW------------------------- 290
N +I FGK G+ A +F K ++ G PN T+
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 291 ----------NSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE-QGKWD 339
++I W C+EG +A +++ + + P+ T+I+ L + G
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 340 TIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALA 399
++ ++ ++ ++ ++ + ++A+ + + S+G +F +
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
+A ++ G ++A +VL++ME G++P++ ++I+ ++ G EA + K+
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
VTY L++ + + +++DE + M+ G P+
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPN 511
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 136/309 (44%), Gaps = 6/309 (1%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
L+ F G+ + + ++ + GF PN+ Y + A V E++ +
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLF--VKMQKEGVRPNIVTWNSLIKWHCR-EGDYT 304
+ + +II F K G+ EA ++ K +++ + P V +LI C+ +G T
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTIT 354
Query: 305 KALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV 364
A + D+ + K F +I L K M S+G AV+ ++V
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ G A+E ++ ++S G+ + + + YA+ G+ ++A ++L + + +
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAF-IRTKKFDEVPI 483
+ V + LI + Y EA+ + + + GV P+ Y L+++F ++ +++ +
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEV 534
Query: 484 IYKRMETDG 492
+++ M+ G
Sbjct: 535 LFEEMKQKG 543
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ ++ FVS G E+ ++M K PNS+ +S ++ + ++ +
Sbjct: 405 TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ I D + NS++ + K G +A K+F + + PNIV++N++I + G
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGFG 520
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA-VYAV 362
KAL LFS ++ G P+ F+ ++S G D K F+SM S N + G YA
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYAC 580
Query: 363 LVDIFGQYGKFQNAEECVQALKSE---GVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
+VD+ G+ G +A + + + GV S + + + + L E A K L +E
Sbjct: 581 MVDLLGRSGLLDDASNLISTMPCKPHSGVWGS---LLSASKTHLRVDLAELAAKKLIELE 637
Query: 420 GEGIEPNIVM 429
+ P +V+
Sbjct: 638 PDSATPYVVL 647
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 142/343 (41%), Gaps = 44/343 (12%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKG-FQPNSFVYSKIVGLYRDNGMWKKATE 238
R T+ ++D + AG ED + M+ +G + NS + + RD +++ ++
Sbjct: 237 RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ 296
Query: 239 VLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHC 298
+ + + D + NS++ + K G +GEA +F M+ + + V+WNSLI
Sbjct: 297 IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLV 352
Query: 299 REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
+ ++A LF M + D + +I +G+ + F M + N + A
Sbjct: 353 QRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTA 408
Query: 359 VYAVLV------DIFGQYGKFQNAEEC-------------------VQALKSEGVLVSPN 393
+ + V + + K E C ++ L+ G +V N
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMN 468
Query: 394 IFC------ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAM 447
I +L + Y + G A K+ + EPNIV N +I+ +S G +A+
Sbjct: 469 IVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISGYSYNGFGKKAL 524
Query: 448 SVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
++ ++ SG P+ VT+ L+ A + D +K M++
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 175/425 (41%), Gaps = 56/425 (13%)
Query: 84 ISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGL 143
ISK + GNL A ++ QM S S+ +I A G+ S+A +F EM
Sbjct: 57 ISKHARNGNLQEAEAIFRQMS----NRSIVSWIAMISAYAENGKMSKAWQVFDEM----- 107
Query: 144 KPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWS 203
+ + E+ + +Y ++ FV AGR ++
Sbjct: 108 --PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEF 165
Query: 204 TINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFG 263
E +K F+ +S + ++ Y G W +A V + + +++ + S++ +
Sbjct: 166 LYAETPVK-FR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCS----SMVHGYC 219
Query: 264 KYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
K G + +A LF +M + N++TW ++I + + G + LF M+++G D K
Sbjct: 220 KMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG---DVK 272
Query: 324 IFVTIISCLGEQGKWDTIKKCFESMTSR-GNKKYGAVYAV-----------LVDIFGQYG 371
+ ++ + K C + + R G++ +G V + L+ ++ + G
Sbjct: 273 VNSNTLAVM--------FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
Query: 372 KFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
A+ +K++ VS N +L Q+ +A ++ + M G+ ++V
Sbjct: 325 YMGEAKAVFGVMKNKDS-VSWN---SLITGLVQRKQISEAYELFEKMPGK----DMVSWT 376
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
+I FS G + + ++ + E D +T+T ++ AF+ ++E + +M
Sbjct: 377 DMIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQK 432
Query: 492 GCTPD 496
P+
Sbjct: 433 EVCPN 437
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 168/432 (38%), Gaps = 45/432 (10%)
Query: 88 CKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRL 147
CK ++ A L QME Q S+ +I +VG SE L M GL+P
Sbjct: 190 CKCDHVGDAKDLFDQME----QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQ 245
Query: 148 NLYNIXXXXXXXXXXXXXXXXXXXEMVDSGI-----------------------WRTRET 184
+ ++V +G +R ET
Sbjct: 246 QTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLET 305
Query: 185 --------YEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKA 236
+ +++ + GR E +EM G +S + +V G +
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 237 TEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKW 296
V + +LDT NS+I + K G L ++L +F +M + ++V+WN++I
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER----DLVSWNAIISG 421
Query: 297 HCREGDYTKALNLFSDMQEQGLYP-DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
+ + D KAL LF +M+ + + D V+++ G K + +
Sbjct: 422 YAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRP 481
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
V LVD++ + G + A+ C ++ + V VS I A Y G + A+++
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWKDV-VSWGILIA---GYGFHGKGDIALEIY 537
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH-IKESGVSPDLVTYTTLMKAFIR 474
G+EPN V+ ++++ S+ G + + ++ +++ GV P+ ++ R
Sbjct: 538 SEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCR 597
Query: 475 TKKFDEVPIIYK 486
K+ ++ YK
Sbjct: 598 AKRIEDAFKFYK 609
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 137/348 (39%), Gaps = 44/348 (12%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ LL S RL S ++ + GF + ++ S +V LY G+ A +V EE+
Sbjct: 48 TFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM 107
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRP------------------ 285
RER D + ++I + + G +GEA L +M+ +G++P
Sbjct: 108 RER----DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL 163
Query: 286 --------------NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+I NS++ +C+ A +LF M+++ D + T+IS
Sbjct: 164 QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISG 219
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
G I K M G + + + + G + + G V
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 392 PNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYH 451
++ AL Y + G E + +VL+ + + ++V ++I+ GR +A+ V+
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNK----DVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 452 HIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
+ +SG +++ + + FD ++ + G T D A
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 105/258 (40%), Gaps = 15/258 (5%)
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
IR + T +NS I+ +G+ + L F M + P+ T+ SL+K
Sbjct: 2 IRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR 61
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
+ L++ + G D I ++++ + G +K FE M R + A
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTA---- 117
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQ--QGLCEQAIKVLQIMEG 420
++ + + G A V ++ +G+ P + + + Q C V+
Sbjct: 118 MIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIY---- 173
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
G + +I ++N ++N + +A ++ +++ D+V++ T++ + E
Sbjct: 174 -GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMSE 228
Query: 481 VPIIYKRMETDGCTPDRK 498
+ + RM DG PD++
Sbjct: 229 ILKLLYRMRGDGLRPDQQ 246
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 184/452 (40%), Gaps = 58/452 (12%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ ++S C GN+ + + + GF S LI+ G T A+ +F++M
Sbjct: 73 FTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
C + + ++ EM R + I++ G+LE
Sbjct: 133 -CDSRNEVTWCSLLFAYMNAEQFEAALDVFV-EMPK----RVAFAWNIMISGHAHCGKLE 186
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIV-----------------GLYRDNGMWKKATE---- 238
S EM F+P+ + +S ++ + NG W A E
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG-WSSAVEAKNS 245
Query: 239 VL----------EEIRE-RKISLDTHI-YNSIIDTFGKYGELGEALKLFVKMQKEGVRPN 286
VL + +RE I + T + +NSIID K GE +AL++F ++ N
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK----N 301
Query: 287 IVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTII---SCLGEQGKWDTIKK 343
IVTW ++I + R GD +AL F +M + G+ D + ++ S L G I
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 344 CFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYA 403
C + G + Y V LV+++ + G + A+ + ++ LVS N + A+
Sbjct: 362 C---LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD-LVSWN---TMLFAFG 414
Query: 404 QQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH-IKESGVSPDL 462
GL +QA+K+ M GI+P+ V L+ S++G E ++ +K+ + ++
Sbjct: 415 VHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEV 474
Query: 463 VTYTTLMKAFIRTKKFDE---VPIIYKRMETD 491
T ++ F R E + Y + TD
Sbjct: 475 DHVTCMIDMFGRGGHLAEAKDLATTYSSLVTD 506
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 18/234 (7%)
Query: 257 SIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ 316
S I + K G + A ++F M + + V WN+++ + R G + +A+ LF+ ++
Sbjct: 9 SKIASLAKSGRIASARQVFDGMPE----LDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 317 GLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNA 376
PD F I+S G +K + G V L+D++G+ +A
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML--NMLI 434
+ + + + + +C+L AY E A+ V M P V N++I
Sbjct: 125 NKVFRDMCCDS--RNEVTWCSLLFAYMNAEQFEAALDVFVEM------PKRVAFAWNIMI 176
Query: 435 NAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
+ ++ G+ +S++ + ES PD T+++LM A D ++Y RM
Sbjct: 177 SGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC----SADSSNVVYGRM 226
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 125/331 (37%), Gaps = 50/331 (15%)
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMW 233
+D+ W T +L + G ++ + +++ +P+ + ++ I+ G
Sbjct: 33 LDTVAWNT------MLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNV 86
Query: 234 KKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKM--------------- 278
K ++ + + NS+ID +GK + A K+F M
Sbjct: 87 KFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLF 146
Query: 279 ------QKEGVRPNIV--------TWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKI 324
Q E V WN +I H G L+LF +M E PD
Sbjct: 147 AYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYT 206
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLV--DIFGQYGKFQNAEECVQA 382
F ++++ D+ + M K G AV + Y K + ++ ++
Sbjct: 207 FSSLMNACSA----DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 383 LKSEGVL--VSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
L+S VL VS N ++ +A + G E+A++V + E NIV +I +
Sbjct: 263 LESIEVLTQVSWN---SIIDACMKIGETEKALEVFHLAP----EKNIVTWTTMITGYGRN 315
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
G +A+ + + +SGV D Y ++ A
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHA 346
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 111/226 (49%), Gaps = 9/226 (3%)
Query: 256 NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQE 315
N++I FG+ GE+ +A ++F M+ R N TW +IK + R+G +AL+LF+ MQ+
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMED---RDN-ATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 316 QGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQN 375
QG+ P ++I+S ++ + V +VL+ ++ + G+
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 376 AEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLIN 435
A+ S+ ++ ++ ++ + YA GL E+A+K+ M G PN V L ++
Sbjct: 385 AKLVFDRFSSKDII----MWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 436 AFSNAGRYMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIRTKKFDE 480
A S AG+ E + ++ ++ V+P + Y+ + R + D+
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDK 486
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
F + +V S ++ +Y G KA V + R S D ++NSII + +G EAL
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFD----RFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 273 KLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ-GLYPDPKIFVTIISC 331
K+F +M G PN VT +++ G + L +F M+ + + P + + +
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
LG G+ D + ESMT + + V+ L+ + + AE + L
Sbjct: 478 LGRAGQVDKAMELIESMTIKPD---ATVWGALLGACKTHSRLDLAEVAAKKL 526
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 131/304 (43%), Gaps = 53/304 (17%)
Query: 220 YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ 279
++ IV Y NG+ K+A ++ +E+ ER + +N ++ + K + EA +F M
Sbjct: 51 WNSIVSGYFSNGLPKEARQLFDEMSERNVV----SWNGLVSGYIKNRMIVEARNVFELMP 106
Query: 280 KEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ----------GLYPDPKI----- 324
+ N+V+W +++K + +EG +A +LF M E+ GL D +I
Sbjct: 107 ER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARK 162
Query: 325 ------------FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
+I L +G+ D + F+ M R + ++ + Q +
Sbjct: 163 LYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNR 218
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
A + + + E VS + ++ Y G E A + ++M ++P ++ N
Sbjct: 219 VDVARKLFEVM-PEKTEVS---WTSMLLGYTLSGRIEDAEEFFEVMP---MKP-VIACNA 270
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD-EVPIIYKRMETD 491
+I F G +A V+ +++ D T+ ++KA+ R K F+ E ++ +M+
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYER-KGFELEALDLFAQMQKQ 325
Query: 492 GCTP 495
G P
Sbjct: 326 GVRP 329
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/309 (18%), Positives = 131/309 (42%), Gaps = 8/309 (2%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
RT ++ ++ + G + ++M+ +P+ ++ + K+ +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+ + + ++ + S+ + K G++ A LF KM+ PN++ WN++I + +
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAK 300
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
G +A+++F +M + + PD + IS + G + + +E + + +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 360 YAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIME 419
+ L+D+F + G + A V+V + A+ Y G +AI + + ME
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVV----WSAMIVGYGLHGRAREAISLYRAME 416
Query: 420 GEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
G+ PN V L+ A +++G E ++ + + ++P Y ++ R D
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLD 476
Query: 480 EVPIIYKRM 488
+ + K M
Sbjct: 477 QAYEVIKCM 485
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/416 (19%), Positives = 161/416 (38%), Gaps = 56/416 (13%)
Query: 76 SSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLF 135
S FY+ LI + L + + A++ LG Q S + T LI A + G + A +F
Sbjct: 20 SDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 136 KEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSA 195
++ +P++ +N M + + T+ LL
Sbjct: 77 DDLP----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 196 GRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLE--EIRERKISLDTH 253
L+ ++ GF + FV + ++ LY A V E + ER I
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV---- 188
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+ +I+ + + GE EAL++F +M+K V+P+ V S++ D + ++ + +
Sbjct: 189 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
+ GL +P + +++ + + G+ T K F+ M
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK------------------------ 284
Query: 374 QNAEECVQALKSEGVLVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN 431
SPN+ A+ + YA+ G +AI + M + + P+ + +
Sbjct: 285 -----------------SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 432 MLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
I+A + G +A S+Y ++ S D+ + L+ F + + +++ R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 135/339 (39%), Gaps = 18/339 (5%)
Query: 92 NLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYN 151
+L + S+ A + +G ++ L G+ + A +LF +M P L L+N
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM----KSPNLILWN 292
Query: 152 IXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK 211
EM++ + + + G LE S +
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 212 GFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEA 271
++ + F+ S ++ ++ G + A V + +R D +++++I +G +G EA
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYGLHGRAREA 408
Query: 272 LKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISC 331
+ L+ M++ GV PN VT+ L+ G + F+ M + + P + + +I
Sbjct: 409 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDL 468
Query: 332 LGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVS 391
LG G D + + M + V+ L+ ++ + E Q L S +
Sbjct: 469 LGRAGHLDQAYEVIKCMPVQPGV---TVWGALLSACKKHRHVELGEYAAQQLFS----ID 521
Query: 392 PN---IFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
P+ + L+N YA L ++ +V M+ +G+ ++
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 109/242 (45%), Gaps = 12/242 (4%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D + +D + G + A +F +M ++VTWN++I+ +CR G +A LF
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHR----DVVTWNTMIERYCRFGLVDEAFKLF 200
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
+M++ + PD I I+S G G + +E + + + LV ++
Sbjct: 201 EEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGA 260
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
G A E + + + VS A+ + Y++ G + A Q++ + + ++V
Sbjct: 261 GCMDMAREFFRKMSVRNLFVST----AMVSGYSKCGRLDDA----QVIFDQTEKKDLVCW 312
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMET 490
+I+A+ + EA+ V+ + SG+ PD+V+ +++ A D+ ++ +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 491 DG 492
+G
Sbjct: 373 NG 374
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 13/278 (4%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
++ +V + ++ EM G +P+ ++ + G+ KA V I
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
+ + I N++I+ + K G L +F KM R N+V+W+S+I G+ + AL
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMP----RRNVVSWSSMINALSMHGEASDAL 430
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGN-KKYGAVYAVLVDI 366
+LF+ M+++ + P+ FV ++ G + KK F SMT N Y +VD+
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 490
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
FG+ + A E ++++ +V + + + L + A K + +E +
Sbjct: 491 FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGAL 550
Query: 427 IVMLNMLINA-----FSNAGRYMEAMSVYHHIKESGVS 459
++M N+ N R ME +V+ KE G+S
Sbjct: 551 VLMSNIYAREQRWEDVRNIRRVMEEKNVF---KEKGLS 585
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 23/339 (6%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
T+ +++ + G +++ + EMK P+ + IV G + + E +
Sbjct: 179 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
E + +DTH+ +++ + G + A + F KM VR N+ +++ + + G
Sbjct: 239 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM---SVR-NLFVSTAMVSGYSKCGRL 294
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
A +F +++ L + T+IS E + FE M G K +
Sbjct: 295 DDAQVIFDQTEKKDLV----CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGI 423
+ G A+ + G+ +I AL N YA+ G + V + M
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP---- 406
Query: 424 EPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPI 483
N+V + +INA S G +A+S++ +K+ V P+ VT+ ++ + +E
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 484 IYKRM----------ETDGCTPDRKAK-QMLQDALTALE 511
I+ M E GC D + +L++AL +E
Sbjct: 467 IFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE 505
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 146/344 (42%), Gaps = 19/344 (5%)
Query: 101 AQMEALGFQLSSYSYTHLIEAL---GNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXX 157
AQM +G ++Y+ + LIE + A +FK + +P L ++N
Sbjct: 54 AQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI----QEPNLLIWNTMFRGH 109
Query: 158 XXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNS 217
M+ G+ T+ +L + ++ + G +
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 218 FVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVK 277
+V++ ++ +Y NG + A +V ++ R D Y ++I + G + A KLF +
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 278 MQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGK 337
+ + ++V+WN++I + G+Y +AL LF DM + + PD VT++S + G
Sbjct: 226 IPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 338 WDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA 397
+ ++ + G + L+D++ + G+ + A + L + V +S N
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV-ISWN---T 337
Query: 398 LANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAG 441
L Y L ++A+ + Q M G PN V + ++ A ++ G
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 11/240 (4%)
Query: 235 KATEVLEEIRERKISLDTHIYNSIIDTFGKYGELG---EALKLFVKMQKEGVRPNIVTWN 291
K + L I + I + H N + ++ L E L + + K PN++ WN
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
++ + H D AL L+ M GL P+ F ++ + + ++ +
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G V+ L+ ++ Q G+ ++A + V+ + AL YA +G E A
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS----YTALIKGYASRGYIENA 219
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
K+ E ++V N +I+ ++ G Y EA+ ++ + ++ V PD T T++ A
Sbjct: 220 QKLFD----EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/431 (19%), Positives = 168/431 (38%), Gaps = 84/431 (19%)
Query: 96 AMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXX 155
A+ L M +LG +SY++ ++++ E + ++ G L+LY
Sbjct: 118 ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCD--LDLY--VHT 173
Query: 156 XXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQP 215
++ D R +Y L+ + S G +E+ +E+ +K
Sbjct: 174 SLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK---- 229
Query: 216 NSFVYSKIVGLYRDNGMWKKATEVLEEI----------------------------RERK 247
+ ++ ++ Y + G +K+A E+ +++ R+
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 248 ISLDTH-------IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ +D H I N++ID + K GEL A LF ++ + ++++WN+LI +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHM 345
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
Y +AL LF +M G P+ ++I+ G D G
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI----------------GRWI 389
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
V +D + LK GV + ++ +L + YA+ G E A +V +
Sbjct: 390 HVYID---------------KRLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-- 430
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
+ ++ N +I F+ GR + ++ +++ G+ PD +T+ L+ A + D
Sbjct: 431 --LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 481 VPIIYKRMETD 491
I++ M D
Sbjct: 489 GRHIFRTMTQD 499
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 155/418 (37%), Gaps = 80/418 (19%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y+ LI G ++ A L ++ S+ +I G EA LFK+M+
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDV----VSWNAMISGYAETGNYKEALELFKDMM 258
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
++P + + D G + L+D + G LE
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 200 D--------------TWSTI-----------------NEMKMKGFQPNSFVYSKIVGLYR 228
+W+T+ EM G PN I+
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 229 -----DNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGV 283
D G W V + R + ++ + + S+ID + K G++ A ++F + +
Sbjct: 379 HLGAIDIGRW---IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI----L 431
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKK 343
++ +WN++I G + +LFS M++ G+ PD FV ++S G D +
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 344 CFESMTSRGNKKYGAV-----YAVLVDIFGQYGKFQNAEECVQALKS--EGVLVSPNIFC 396
F +MT + Y Y ++D+ G G F+ AEE + ++ +GV I+C
Sbjct: 492 IFRTMT----QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV-----IWC 542
Query: 397 ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLN--------MLINAFSNAGRYMEA 446
+L A G E GE N++ + +L N +++AGR+ E
Sbjct: 543 SLLKACKMHGNVEL---------GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 166/400 (41%), Gaps = 35/400 (8%)
Query: 70 RPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
R EE + E ++ ++ K + + L +++ LG ++ S S T +I + ++G
Sbjct: 391 RISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGA-- 448
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGI-WR-------T 181
+L + ++C Y + +M D + WR
Sbjct: 449 ---VLLGKSLHC--------YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTN 497
Query: 182 RETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLE 241
T+ ++ +V + E + + M + F+P+S ++ + G ++ +
Sbjct: 498 VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR 557
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
I E + ++ + ++ID + K G L ++ +LF G + + V WN +I + G
Sbjct: 558 YITETEHEMNLSLSAALIDMYAKCGHLEKSRELF----DAGNQKDAVCWNVMISGYGMHG 613
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
D A+ LF M+E + P F+ ++S G + KK F M K Y+
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYS 673
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPN--IFCALANAYAQQGLCEQAIKVLQIME 419
LVD+ + G + AE V ++ SP+ I+ L ++ G E I++ +
Sbjct: 674 CLVDLLSRSGNLEEAESTVMSMP-----FSPDGVIWGTLLSSCMTHGEFEMGIRMAE--R 726
Query: 420 GEGIEP-NIVMLNMLINAFSNAGRYMEAMSVYHHIKESGV 458
+P N ML N +S AG++ EA ++ESGV
Sbjct: 727 AVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 15/238 (6%)
Query: 247 KISLDTHI--YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK--WHCREGD 302
K SLD I NS+ID +GK G+L A ++F + N++TWN++I HC + +
Sbjct: 461 KTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-----TNVITWNAMIASYVHCEQSE 515
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
KA+ LF M + P VT++ G + + +T ++ ++ A
Sbjct: 516 --KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAA 573
Query: 363 LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG 422
L+D++ + G + + E A + V N+ + + Y G E AI + ME
Sbjct: 574 LIDMYAKCGHLEKSRELFDAGNQKDA-VCWNV---MISGYGMHGDVESAIALFDQMEESD 629
Query: 423 IEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
++P L++A ++AG + ++ + + V P+L Y+ L+ R+ +E
Sbjct: 630 VKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEE 687
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 125/288 (43%), Gaps = 12/288 (4%)
Query: 195 AGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHI 254
+G +E+++ EM+ KG P+ V S ++ + + + SLD+ +
Sbjct: 309 SGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTV 368
Query: 255 YNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQ 314
NS++ + K+ L A KLF ++ +EG N WN+++K + + + K + LF +Q
Sbjct: 369 CNSLLSMYCKFELLSVAEKLFCRISEEG---NKEAWNTMLKGYGKMKCHVKCIELFRKIQ 425
Query: 315 EQGLYPDPKIFVTIISCLGEQGKWDTIK--KCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
G+ D ++IS G K C+ TS +V L+D++G+ G
Sbjct: 426 NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI--SVVNSLIDLYGKMGD 483
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
A +++ +++ N A+ +Y E+AI + M E +P+ + L
Sbjct: 484 LTVAWR--MFCEADTNVITWN---AMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
L+ A N G ++ +I E+ +L L+ + + ++
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEK 586
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 109/285 (38%), Gaps = 45/285 (15%)
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
+S + + + +I ++ YG+ + ++F + R +I WNS+IK H GDY ++L
Sbjct: 55 LSENIFVASKLISSYASYGKPNLSSRVFHLV----TRRDIFLWNSIIKAHFSNGDYARSL 110
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR--GNKKYGAVYAVLVD 365
F M G PD ++S E W + + + G + AV A V
Sbjct: 111 CFFFSMLLSGQSPDHFTAPMVVSACAEL-LWFHVGTFVHGLVLKHGGFDRNTAVGASFVY 169
Query: 366 IFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE- 424
+ + G Q+A + V+ + A+ + + Q G E + L M G +
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVA----WTAIISGHVQNGESEGGLGYLCKMHSAGSDV 225
Query: 425 --PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSP---------------------- 460
PN L A SN G E ++ ++G++
Sbjct: 226 DKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Query: 461 ---------DLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
D+ ++T+++ + R+ +E ++ M+ G PD
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD 330
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 8/235 (3%)
Query: 207 EMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG 266
EM G + + YS ++ Y G K ++ + +++ I D +YN+++ K
Sbjct: 292 EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKAS 351
Query: 267 ELGEALKLFVKMQKE-GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIF 325
+ EA L M++E G+ PN+VT+NSLIK C+ +A +F +M E+GL+P + +
Sbjct: 352 FVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Query: 326 VTIISCL--GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQAL 383
+ L GE+ + + M G + Y +L+ ++ F N +
Sbjct: 412 HAFMRILRTGEE-----VFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEM 466
Query: 384 KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
K + V + + + + G E+A + M+ +G+ PN + +M+ + FS
Sbjct: 467 KEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS 521
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 115/260 (44%), Gaps = 5/260 (1%)
Query: 247 KISLDTHIYNSIIDTFGKY-GELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTK 305
K D +N +++ + G EA +++++M GV+ ++V+++S+I + + G K
Sbjct: 261 KYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNK 320
Query: 306 ALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTS-RGNKKYGAVYAVLV 364
L LF M+++ + PD K++ ++ L + + ++M +G + Y L+
Sbjct: 321 VLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLI 380
Query: 365 DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIE 424
+ K + A++ + +G+ + + A E+ ++L M G E
Sbjct: 381 KPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCE 437
Query: 425 PNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPII 484
P + MLI + + ++ +KE V PDL +Y ++ K +E
Sbjct: 438 PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGY 497
Query: 485 YKRMETDGCTPDRKAKQMLQ 504
YK M+ G P+ + M+Q
Sbjct: 498 YKEMKDKGMRPNENVEDMIQ 517
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 133/318 (41%), Gaps = 6/318 (1%)
Query: 37 PNSLNSSNLWIRNKVVNSESDTKTTLFPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRA 96
P+ +NS L I + + D + R E+ + + L+S C+ N+ A
Sbjct: 192 PSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA 251
Query: 97 MSLLAQMEALGFQLSSYSYTHLIEALGNV-GRTSEADMLFKEMIYCGLKPRLNLYNIXXX 155
L+ + + + S+ ++ NV G EA+ ++ EM G+K + Y+
Sbjct: 252 GHLIFCNKD-KYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMIS 310
Query: 156 XXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKM-KGFQ 214
M I R+ Y ++ A + + + + M+ KG +
Sbjct: 311 CYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIE 370
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
PN Y+ ++ ++A +V +E+ E+ + Y++ + + GE E +L
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE--EVFEL 427
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE 334
KM+K G P + T+ LI+ CR D+ L L+ +M+E+ + PD ++ +I L
Sbjct: 428 LAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Query: 335 QGKWDTIKKCFESMTSRG 352
GK + ++ M +G
Sbjct: 488 NGKIEEAYGYYKEMKDKG 505
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 133/333 (39%), Gaps = 40/333 (12%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
Y+ + V+A RL + E K ++I+ LY GM++ A +V EE+
Sbjct: 76 VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEM 135
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ-KEGVRPNIVTWNSLIKWHCREGD 302
R +N+++ + + +LF ++ K ++P+IV++N+LIK C +
Sbjct: 136 PNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDS 195
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
+A+ L +++ +GL PD F T++
Sbjct: 196 LPEAVALLDEIENKGLKPDIVTFNTLL--------------------------------- 222
Query: 363 LVDIFGQY--GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
Y G+F+ EE + + V + + A A + ++ + + ++
Sbjct: 223 ----LSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKA 278
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDE 480
G++P++ N +I N G+ EA + Y I + G PD T+ L+ A + F+
Sbjct: 279 SGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFES 338
Query: 481 VPIIYKRMETDGCTPDRKAKQMLQDALTALERR 513
++K + + Q L D L +R
Sbjct: 339 AIELFKETFSKRYLVGQTTLQQLVDELVKGSKR 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 5/249 (2%)
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMK-GFQPNSFVYSKIVGLYRDN 230
EM + R+ ++ LL + + + + NE+ K +P+ Y+ ++ +
Sbjct: 134 EMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEK 193
Query: 231 GMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG--ELGEALKLFVKMQKEGVRPNIV 288
+A +L+EI + + D +N+++ + G ELGE +++ KM ++ V +I
Sbjct: 194 DSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE--EIWAKMVEKNVAIDIR 251
Query: 289 TWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESM 348
T+N+ + E + +NLF +++ GL PD F +I +GK D + ++ +
Sbjct: 252 TYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEI 311
Query: 349 TSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLC 408
G + A +A+L+ + G F++A E + S+ LV L + +
Sbjct: 312 VKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKR 371
Query: 409 EQAIKVLQI 417
E+A ++++I
Sbjct: 372 EEAEEIVKI 380
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 147/374 (39%), Gaps = 40/374 (10%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
Y L++ CKE ++A LL +M+ L SS SY L+ G T + + +E+
Sbjct: 126 YGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELK 185
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
+ P YN+ SG+ R +++ GR+
Sbjct: 186 AENVMPDSYTYNVWMRALAATNDI------------SGVER-------VIEEMNRDGRVA 226
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
W+T YS + +Y D G+ +KA + L+E+ + D Y +I
Sbjct: 227 PDWTT---------------YSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLI 271
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
+G+ G+L E +++ ++ + + V + ++I+ + D A LF + Q
Sbjct: 272 TLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCST 331
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
D +I +I ++G + E RG K + + +D + + G A EC
Sbjct: 332 YDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALEC 391
Query: 380 VQALKSEGV------LVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+ S G L SP AL + + Q+ A +L+I++ + L
Sbjct: 392 MSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPL 451
Query: 434 INAFSNAGRYMEAM 447
I ++ AG+ AM
Sbjct: 452 IRTYAAAGKSHPAM 465
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 117/273 (42%), Gaps = 4/273 (1%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
+T TY LL+ + E +N+MK P+S Y+ ++ LY G +K +
Sbjct: 121 KTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAM 180
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG-VRPNIVTWNSLIKWHC 298
++E++ + D++ YN + ++ ++ +M ++G V P+ T++++ +
Sbjct: 181 IQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYV 240
Query: 299 REGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
G KA +++ + D + +I+ G GK + + + S+ K
Sbjct: 241 DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNV 300
Query: 359 VYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIM 418
Y ++ + + AE + ++ I L AYAQ+GL ++A ++ +
Sbjct: 301 AYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKA 360
Query: 419 EGEGIEPNIVMLNMLINAFSNAG---RYMEAMS 448
G + N + ++ + +G R +E MS
Sbjct: 361 PRRGGKLNAKTWEIFMDYYVKSGDMARALECMS 393
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 129/312 (41%), Gaps = 36/312 (11%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKE-M 138
Y+ L+ K ++GNL A LL ++ L + +L+ A G + + +F+E +
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVL 132
Query: 139 IYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRL 198
I G +P + + Y L F++
Sbjct: 133 ILPGKEPL----------------------------------SSDCYLNLARAFINTDDC 158
Query: 199 EDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
S + E+ V ++I+ + + K +L+E++E + D YNS+
Sbjct: 159 TYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSV 218
Query: 259 IDTFGKYGELGEALKLFVKMQKE-GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
+D G+ G + E L + M+++ V NI+T+N+++ + + L ++++M + G
Sbjct: 219 LDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCG 278
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAE 377
+ PD + +I LG G + F+ M R + VY L+D + G FQ+A
Sbjct: 279 IEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSAL 338
Query: 378 ECVQALKSEGVL 389
+ LK+ L
Sbjct: 339 QLSDELKNTSSL 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 288 VTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF-E 346
+ + +L++ R+G+ + A +L +QE+ + +F +++ GE + F E
Sbjct: 71 IDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFRE 130
Query: 347 SMTSRGNKKYGAVYAVLVDIFGQYGK-FQNAEECV-----------QALKSEGVLVSPNI 394
+ G + + D + + F N ++C +L ++++ I
Sbjct: 131 VLILPGKEPLSS------DCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRII 184
Query: 395 FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK 454
F A+A+ ++ + +L+ M+ +P+++ N +++ AG E + V +K
Sbjct: 185 F-----AFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMK 239
Query: 455 ES-GVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKAKQMLQDAL 507
E VS +++TY T++ + +FD +IY M G PD + + D+L
Sbjct: 240 EDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSL 293
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 81/206 (39%), Gaps = 2/206 (0%)
Query: 71 PGEE-LSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTS 129
PG+E LSS+ Y L + SLL ++ +I A +
Sbjct: 135 PGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQID 194
Query: 130 EADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMV-DSGIWRTRETYEIL 188
+ M+ KEM KP + YN M D + TY +
Sbjct: 195 KVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTV 254
Query: 189 LDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKI 248
L+ A R + NEM G +P+ Y+ ++ +G K++ + +E+++R+I
Sbjct: 255 LNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
Query: 249 SLDTHIYNSIIDTFGKYGELGEALKL 274
++Y ++ID K G+ AL+L
Sbjct: 315 RPSVYVYRALIDCLKKSGDFQSALQL 340
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 8/267 (2%)
Query: 237 TEVLEEIRERKISLDT----HIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
T V + + ++I + T + +N ++D K G + E L +M + V+P+ T+N
Sbjct: 215 THVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNV 273
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRG 352
L CR D KA+ L +M E G P+ + I + G D F+ M ++G
Sbjct: 274 LFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKG 333
Query: 353 NKKYGAVYAVLVDIFGQYGKFQNAEECVQALK---SEGVLVSPNIFCALANAYAQQGLCE 409
+ + K AEEC + + S G L + + + +
Sbjct: 334 SAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVD 393
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+A K L M +G P+IV N + + EA+ +Y + ES +P + TY L+
Sbjct: 394 EAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Query: 470 KAFIRTKKFDEVPIIYKRMETDGCTPD 496
F D + M+ C D
Sbjct: 454 SMFFEMDDPDGAFNTWTEMDKRDCVQD 480
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 16/274 (5%)
Query: 114 SYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEM 173
++ L++AL G E + L + M + +KP N +N+ EM
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 174 VDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQ---PNSFVYS-KIVGLYRD 229
+++G TY +D F AG +++ + M KG P + ++ IV L ++
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 230 NGMWKKATEVLEEIRERKISL----DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRP 285
+ KA E E I R IS D Y +I+ ++ EA K +M +G P
Sbjct: 355 D----KAEECFELI-GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 286 NIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCF 345
+IVT+N ++ C +AL L+ M E P + + +IS E D +
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 346 ESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
M R + Y +++ G + + E C
Sbjct: 470 TEMDKRDCVQDVETYCAMIN--GLFDCHRAKEAC 501
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 113/280 (40%), Gaps = 7/280 (2%)
Query: 88 CKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYCG---LK 144
C+ + +AM LL +M G + +++Y I+ G EA LF MI G
Sbjct: 279 CRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSA 338
Query: 145 PRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDTWST 204
P + + M+ +G TY+ +++ A ++++ +
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 205 INEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGK 264
++EM KG+ P+ Y+ + + +N +A ++ + E + + YN +I F +
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 458
Query: 265 YGELGEALKLFVKMQKEGVRPNIVTWNSLIK--WHCREGDYTKALNLFSDMQEQGLYPDP 322
+ A + +M K ++ T+ ++I + C +A L ++ +GL
Sbjct: 459 MDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA--KEACFLLEEVVNKGLKLPY 516
Query: 323 KIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAV 362
++F + + L E G I K E M N +A+
Sbjct: 517 RVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRFAL 556
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 5/200 (2%)
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEE 242
E++ +++ ++S G ++M G +P+ ++ ++ +K ++
Sbjct: 376 ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS 435
Query: 243 IRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGD 302
I E ++ D + ++++D + K G EA ++F + K+ ++V+W +I + G
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQ 491
Query: 303 YTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR-GNKKYGAVYA 361
+AL F +MQ+ GL PD + ++S G G D K F M S+ G + Y+
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551
Query: 362 VLVDIFGQYGKFQNAEECVQ 381
++DI G+ G+ A E +Q
Sbjct: 552 CMIDILGRAGRLLEAYEIIQ 571
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/416 (19%), Positives = 167/416 (40%), Gaps = 43/416 (10%)
Query: 112 SYSYTHLIEALGNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXX 171
S+++ ++I+A G +GR M+ ++ G + + +
Sbjct: 107 SFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFD 166
Query: 172 EMVDSGIWRTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNG 231
EM + R ++ ++ F +G E M+ GF+PNS + +
Sbjct: 167 EMPE----RDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 232 MWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWN 291
++ E+ + ++ LD ++ ++++D +GK L A ++F KM R ++V WN
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP----RKSLVAWN 278
Query: 292 SLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGE-----QGKW-------- 338
S+IK + +GD + + + M +G P +I+ GK+
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 339 -------------DTIKKC-----FESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECV 380
D KC E++ S+ K + V++ + G + A E
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 381 QALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNA 440
+ S GV F ++ A +Q E+ ++ + +E + ++L+ L++ +S
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 441 GRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
G EA +++ I + D+V++T ++ A+ + E + M+ G PD
Sbjct: 459 GNEKEAFRIFNSIPK----KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPD 510
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/422 (18%), Positives = 177/422 (41%), Gaps = 16/422 (3%)
Query: 71 PGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSE 130
P +++S ++ +IS + G ++A+ L +ME+ GF+ +S S T I A +
Sbjct: 169 PERDVAS--WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLER 226
Query: 131 ADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLD 190
+ ++ + K L E+ ++ + ++
Sbjct: 227 GKEIHRKCV----KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 191 YFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISL 250
+V+ G + +N M ++G +P+ + I+ + + + ++
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLF 310
D ++ S+ID + K GE A +F K QK+ +WN +I + G++ KA+ ++
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE----SWNVMISSYISVGNWFKAVEVY 398
Query: 311 SDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
M G+ PD F +++ + + K+ S++ + + + L+D++ +
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVML 430
G + A ++ + V+ + + +AY G +A+ M+ G++P+ V L
Sbjct: 459 GNEKEAFRIFNSIPKKDVVS----WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTL 514
Query: 431 NMLINAFSNAGRYMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIRTKKFDEV-PIIYKRM 488
+++A +AG E + + ++ G+ P + Y+ ++ R + E II +
Sbjct: 515 LAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTP 574
Query: 489 ET 490
ET
Sbjct: 575 ET 576
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 126/282 (44%), Gaps = 18/282 (6%)
Query: 215 PNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKL 274
P+SF + ++ Y G + + + D + +S++ + K+ +L++
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 275 FVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLG- 333
F +M + ++ +WN++I + G+ KAL LF M+ G P+ IS
Sbjct: 165 FDEMPER----DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSR 220
Query: 334 ----EQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVL 389
E+GK + +KC + +G + V + LVD++G+ + A E Q + + L
Sbjct: 221 LLWLERGK-EIHRKCVK----KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKS-L 274
Query: 390 VSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSV 449
V+ N ++ Y +G + +++L M EG P+ L ++ A S + + +
Sbjct: 275 VAWN---SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Query: 450 YHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETD 491
+ ++ S V+ D+ +L+ + + + + ++ + + D
Sbjct: 332 HGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 30/403 (7%)
Query: 80 YSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMI 139
++ L+ G +D A SL +M + + S+T ++ GR +A L+ EMI
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWTVMLIGFLQDGRIDDACKLY-EMI 167
Query: 140 YCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLE 199
P + NI E+ D R+ T+ ++ + R++
Sbjct: 168 -----PDKD--NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVD 220
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSII 259
D + M K ++ ++ Y NG + A E+ E + + + N++I
Sbjct: 221 DARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI----ACNAMI 272
Query: 260 DTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLY 319
G+ GE+ +A ++F M++ N +W ++IK H R G +AL+LF MQ+QG+
Sbjct: 273 SGLGQKGEIAKARRVFDSMKER----NDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 320 PDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEEC 379
P ++I+S K+ + V +VL+ ++ + G+ ++
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 380 VQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEG-IEPNIVMLNMLINAFS 438
S+ ++ ++ ++ + YA GL E+A+KV M G +PN V ++A S
Sbjct: 389 FDRFPSKDII----MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 439 NAGRYMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIRTKKFDE 480
AG E + +Y ++ GV P Y ++ R +F+E
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
M+ +G +P I+ + +V ++ + +D ++ + ++ + K GE
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG-LYPDPKIFV 326
L ++ +F + + +I+ WNS+I + G +AL +F +M G P+ FV
Sbjct: 382 LVKSKLIFDRFPSK----DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 327 TIISCLGEQGKWDTIKKCFESMTSR-GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKS 385
+S G + K +ESM S G K A YA +VD+ G+ G+F A E + ++
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Query: 386 EGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYME 445
E ++Q + E K L +E E I++ NM +++ GR+ +
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNM----YASQGRWAD 553
Query: 446 A 446
Sbjct: 554 V 554
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 130/303 (42%), Gaps = 51/303 (16%)
Query: 220 YSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQ 279
++ +V Y N M + A ++ +E+ +R I +N ++ + K GE+ EA K+F M
Sbjct: 51 WNSMVAGYFANLMPRDARKLFDEMPDRNIIS----WNGLVSGYMKNGEIDEARKVFDLMP 106
Query: 280 KEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQ----------GLYPDPKI----- 324
+ N+V+W +L+K + G A +LF M E+ G D +I
Sbjct: 107 ER----NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACK 162
Query: 325 ------------FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
++I L ++G+ D ++ F+ M+ R + +V +GQ +
Sbjct: 163 LYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNR 218
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
+A + + E VS + ++ Y Q G E A ++ ++M ++P ++ N
Sbjct: 219 VDDARKIFDVM-PEKTEVS---WTSMLMGYVQNGRIEDAEELFEVMP---VKP-VIACNA 270
Query: 433 LINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDG 492
+I+ G +A V+ +KE + ++ T++K R E ++ M+ G
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDA----SWQTVIKIHERNGFELEALDLFILMQKQG 326
Query: 493 CTP 495
P
Sbjct: 327 VRP 329
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 146/356 (41%), Gaps = 13/356 (3%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G ++ E Y+ L+ +C + + + AQM +GF L+ Y L+ G A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 132 DMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDY 191
+LF+ + L P +N +M + I + T+ +
Sbjct: 163 GILFRSLKIRDLIP----WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 192 FVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLD 251
+ RLE M + + N V S +V +Y + V +++ R +
Sbjct: 219 CSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI-- 276
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
+ S+I +G +G++ E LK F KM++EG RPN VT+ ++ G K F
Sbjct: 277 --TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFY 334
Query: 312 DMQ-EQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQY 370
M+ + G+ P+ + + ++ LG G+ +++ +E + K++ V+ L+ +
Sbjct: 335 SMKRDYGIEPEGQHYAAMVDTLGRAGR---LQEAYEFVMKSPCKEHPPVWGSLLGACRIH 391
Query: 371 GKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
G + E N + AN YA GL E A KV + ME G++ +
Sbjct: 392 GNVKLLELAATKFLELDPTNGGN-YVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 129/307 (42%), Gaps = 20/307 (6%)
Query: 180 RTRETYEILLDYFVSAGRLEDT----WSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKK 235
R E + L GRL++ WS+ G Q Y+ ++ + + K
Sbjct: 74 RKTEKLDKTLKGLCVTGRLKEAVGLLWSS-------GLQVEPETYAVLLQECKQRKEYTK 126
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
+ ++ +L+ ++ ++ + G+L A LF ++ +R +++ WN++I
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLK---IR-DLIPWNAMIS 182
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
+ ++G + L ++ DM++ + PD F ++ + + K+ M R K
Sbjct: 183 GYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS 242
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
V + LVD++ + F + L + V+ + +L + Y G + +K
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT----WTSLISGYGYHGKVSEVLKCF 298
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIK-ESGVSPDLVTYTTLMKAFIR 474
+ M+ EG PN V +++ A ++ G + ++ +K + G+ P+ Y ++ R
Sbjct: 299 EKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGR 358
Query: 475 TKKFDEV 481
+ E
Sbjct: 359 AGRLQEA 365
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 15/277 (5%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
F PN F I+ + + +V + +R I D + S++D + K GE+ +
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 273 KLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
K+F M N VTW S+I H REG +A++LF M+ + L + V+I+
Sbjct: 340 KVFDGMSNR----NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRAC 395
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
G G K+ + +K + + LV ++ + G+ ++A +Q L S V+
Sbjct: 396 GSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS-- 453
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
+ A+ + + G +A+ L+ M EG+EPN + + A +N+ + S++
Sbjct: 454 --WTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSI 511
Query: 453 IKESGVSPDLVTYTTLMKAFIRT-------KKFDEVP 482
K++ ++ + L+ + + + FD +P
Sbjct: 512 AKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/216 (18%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+ +S++ + + GEL AL+ F M+++ ++++W ++I R+G KA+ +F M
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMMEEK----DVISWTAVISACSRKGHGIKAIGMFIGM 275
Query: 314 QEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKF 373
P+ +I+ E+ ++ + R K V L+D++ + G+
Sbjct: 276 LNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEI 335
Query: 374 QNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML 433
+ + + + + +I A+A++G E+AI + +IM+ + N + + +
Sbjct: 336 SDCRKVFDGMSNRNTVTWTSIIA----AHAREGFGEEAISLFRIMKRRHLIANNLTVVSI 391
Query: 434 INAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
+ A + G + ++ I ++ + ++ +TL+
Sbjct: 392 LRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLV 427
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 194 SAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTH 253
S G + + EM +G +PN F YS + ++ + ++ +
Sbjct: 463 SLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF 522
Query: 254 IYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDM 313
+ +++I + K G + EA ++F M ++ N+V+W ++I + R G +AL L M
Sbjct: 523 VGSALIHMYAKCGFVSEAFRVFDSMPEK----NLVSWKAMIMGYARNGFCREALKLMYRM 578
Query: 314 QEQGLYPDPKIFVTIISCLGE 334
+ +G D IF TI+S G+
Sbjct: 579 EAEGFEVDDYIFATILSTCGD 599
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 14/250 (5%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R T+ ++ G E+ S MK + N+ I+ G E+
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+I + I + +I ++++ + K GE +A + ++ ++V+W ++I
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR----DVVSWTAMISGCSS 463
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTII-SCLGEQGKWDTIKKCFESMTSRGNKKYGA 358
G ++AL+ +M ++G+ P+P + + + +C + I + S+ + N
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL--LIGRSIHSIAKK-NHALSN 520
Query: 359 VY--AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
V+ + L+ ++ + G A ++ E LVS A+ YA+ G C +A+K++
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWK---AMIMGYARNGFCREALKLMY 576
Query: 417 IMEGEGIEPN 426
ME EG E +
Sbjct: 577 RMEAEGFEVD 586
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 16/220 (7%)
Query: 211 KGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGE 270
+G + N ++ + ++ +Y G + A + + R D +NS+I ++ +GE +
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR----DVVCWNSVISSYANHGEGKK 639
Query: 271 ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIIS 330
AL++ KM EG+ PN +T+ ++ G L F M G+ P+ + +V ++S
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVS 699
Query: 331 CLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLV 390
LG G+ + ++ E M + K V+ L+ + G + AE + +L
Sbjct: 700 LLGRAGRLNKARELIEKMPT---KPAAIVWRSLLSGCAKAGNVELAEHAAEM----AILS 752
Query: 391 SP---NIFCALANAYAQQGLCEQAIKVLQIMEGEGI--EP 425
P F L+N YA +G+ +A KV + M+ EG+ EP
Sbjct: 753 DPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEP 792
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
++LD +++ID + L ++ +F +M+ + ++V WNS+ + ++ + +AL
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK----DLVIWNSMFAGYVQQSENEEAL 540
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
NLF ++Q PD F +++ G ++ + RG + + L+D++
Sbjct: 541 NLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMY 600
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G ++A + + S V+ ++ ++YA G ++A+++L+ M EGIEPN
Sbjct: 601 AKCGSPEDAHKAFDSAASRDVVCWNSVI----SSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
+ +++A S+AG + + + + G+ P+ Y ++ R + ++ + ++
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 488 MET 490
M T
Sbjct: 717 MPT 719
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/322 (18%), Positives = 136/322 (42%), Gaps = 27/322 (8%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
++ T+ ++ V GR + ++ P+ ++ S ++ + ++
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
I + +D + N +ID++ K G + A KLF M + NI++W +L+ + +
Sbjct: 272 HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK----NIISWTTLLSGYKQ 327
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTII-SC-------LGEQGKWDTIKKCFESMTSR 351
+ +A+ LF+ M + GL PD +I+ SC G Q TIK +
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIK------ANL 381
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGL---C 408
GN Y V L+D++ + +A + + V+ +F A+ Y++ G
Sbjct: 382 GNDSY--VTNSLIDMYAKCDCLTDARKVFDIFAAADVV----LFNAMIEGYSRLGTQWEL 435
Query: 409 EQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTL 468
+A+ + + M I P+++ L+ A ++ + ++ + + G++ D+ + L
Sbjct: 436 HEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSAL 495
Query: 469 MKAFIRTKKFDEVPIIYKRMET 490
+ + + +++ M+
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKV 517
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
+ LDT++ N +I+ + + G + A K+F KM + N+V+W++++ G Y ++L
Sbjct: 75 LELDTYLSNILINLYSRAGGMVYARKVFEKMPER----NLVSWSTMVSACNHHGIYEESL 130
Query: 308 NLFSDM-QEQGLYPDPKI---FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVL 363
+F + + + P+ I F+ S L +G+W + + + G + V +L
Sbjct: 131 VVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW-MVFQLQSFLVKSGFDRDVYVGTLL 189
Query: 364 VDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCA---LANAYAQQGLCEQ---------- 410
+D + + G A AL + + + + +Y L Q
Sbjct: 190 IDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 411 --------AIKVLQIMEGE----------GIEPNIVMLNMLINAFSNAGRYMEAMSVYHH 452
A +L +EG G+E + ++N+LI+++ GR + A +++
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 453 IKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
+ + +++++TTL+ + + E ++ M G PD A
Sbjct: 310 MP----NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 143/317 (45%), Gaps = 30/317 (9%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R ++ L+ +V +G LE+ S + M + N ++ +V +G A ++
Sbjct: 174 RNAVSWTALVVAYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKL 229
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCR 299
+E+ +R D Y S+ID + K G++ A LF + + VR W++LI + +
Sbjct: 230 FDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR----AWSALILGYAQ 281
Query: 300 EGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV 359
G +A +FS+M + + PD I V ++S + G ++ +K + R N K+ +
Sbjct: 282 NGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMN-KFSSH 340
Query: 360 YAV--LVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQI 417
Y V L+D+ + G A + + + LVS +C++ A G +AI++ +
Sbjct: 341 YVVPALIDMNAKCGHMDRAAKLFEEMPQRD-LVS---YCSMMEGMAIHGCGSEAIRLFEK 396
Query: 418 MEGEGIEPNIVMLNMLINAFSNAG------RYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
M EGI P+ V +++ + RY E M + I SPD Y+ ++
Sbjct: 397 MVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSIL---ASPD--HYSCIVNL 451
Query: 472 FIRTKKFDEVPIIYKRM 488
RT K E + K M
Sbjct: 452 LSRTGKLKEAYELIKSM 468
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 137/333 (41%), Gaps = 49/333 (14%)
Query: 200 DTWSTINEMKMKGF-QPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSI 258
+T S + M G +P+ + + ++ + +NG + + V + D + S
Sbjct: 92 ETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSF 151
Query: 259 IDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGL 318
+D +GK +L A K+F +M + N V+W +L+ + + G+ +A ++F M E+ L
Sbjct: 152 VDFYGKCKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGELEEAKSMFDLMPERNL 207
Query: 319 YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEE 378
+ ++ L + G KK F+ M R Y + ++D + + G +A +
Sbjct: 208 GS----WNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTS----MIDGYAKGGDMVSARD 259
Query: 379 CVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFS 438
L E V + AL YAQ G +A KV M + ++P+ ++ L++A S
Sbjct: 260 ----LFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACS 315
Query: 439 NAGRY--MEAMSVYHHIKESGVSP------------------------------DLVTYT 466
G + E + Y H + + S DLV+Y
Sbjct: 316 QMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYC 375
Query: 467 TLMKAFIRTKKFDEVPIIYKRMETDGCTPDRKA 499
++M+ E ++++M +G PD A
Sbjct: 376 SMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 133/293 (45%), Gaps = 17/293 (5%)
Query: 181 TRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVL 240
TR T +L S G + ++ GF+ V S ++ +Y + G A +V
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 241 EEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCRE 300
+ +R +T +YNS++ G + +AL+LF M+K+ V +W ++IK +
Sbjct: 198 YGLDDR----NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-----SWAAMIKGLAQN 248
Query: 301 GDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVY 360
G +A+ F +M+ QGL D F +++ G G + K+ + + + V
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 361 AVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG 420
+ L+D++ + A+ +K + V+ + A+ Y Q G E+A+K+ M+
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVS----WTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 421 EGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFI 473
GI+P+ L I+A +N +E S +H ++ L+ Y T+ + +
Sbjct: 365 SGIDPDHYTLGQAISACANVSS-LEEGSQFH---GKAITSGLIHYVTVSNSLV 413
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 142/364 (39%), Gaps = 89/364 (24%)
Query: 180 RTRETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEV 239
R Y L+ ++ G +ED +G + +S ++ ++ NG+ K+A E
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 240 LEEIRERKISLDTHIYNSIIDTFGKYGELGE----------------------------- 270
E++ + + +D + + S++ G G + E
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 271 ------ALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKI 324
A +F +M+++ N+V+W +++ + + G +A+ +F DMQ G+ PD
Sbjct: 318 CKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 325 FVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQ--------------- 369
IS + + + G Y V LV ++G+
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 370 -------------YGKFQNAEECVQ--------ALKSEGVLVSPNIFCALANAYAQQGLC 408
Y +F A E +Q LK +GV ++ + +A ++ GL
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT-----GVISACSRAGLV 488
Query: 409 EQAIKVLQIMEGE-GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTT 467
E+ + ++M E GI P+I + +I+ FS +GR EAM I PD + +TT
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF---INGMPFPPDAIGWTT 545
Query: 468 LMKA 471
L+ A
Sbjct: 546 LLSA 549
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/325 (18%), Positives = 136/325 (41%), Gaps = 33/325 (10%)
Query: 72 GEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEA 131
G E S ++ +I + G A+ +M+ G ++ Y + ++ A G +G +E
Sbjct: 230 GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Query: 132 DML--------FKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRE 183
+ F++ IY G +++Y + D +
Sbjct: 290 KQIHACIIRTNFQDHIYVG-SALIDMY-----------CKCKCLHYAKTVFDRMKQKNVV 337
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
++ ++ + GR E+ +M+ G P+ + + + + ++ ++ +
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
+ + NS++ +GK G++ ++ +LF +M VR + V+W +++ + + G
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN---VR-DAVSWTAMVSAYAQFGRA 453
Query: 304 TKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV---- 359
+ + LF M + GL PD +IS G + ++ F+ MTS +YG V
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS----EYGIVPSIG 509
Query: 360 -YAVLVDIFGQYGKFQNAEECVQAL 383
Y+ ++D+F + G+ + A + +
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGM 534
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/438 (20%), Positives = 170/438 (38%), Gaps = 46/438 (10%)
Query: 67 EAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVG 126
EA G+E+ + ++L++ +G D A L +M G L++ + I G
Sbjct: 142 EAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYI---GWFC 198
Query: 127 RTSEADMLFKEMIYCGLKPRLNLYN-----IXXXXXXXXXXXXXXXXXXXEMVDSGIWRT 181
R+SE + L + ++ K LN+ + E+ +
Sbjct: 199 RSSETNQLLR-LVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPD 257
Query: 182 RETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLE 241
Y ++ + FV G L + + + + G P S Y + +A EV E
Sbjct: 258 FMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAE 317
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
I K +D I +++I + + A++ V M G P I T + L K CR
Sbjct: 318 VIVSGKFPMDNDILDALIGSVSAV-DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCR-- 374
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
K D + K +E ++S+G Y+
Sbjct: 375 ---------------------------------HDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
+++ + G+ + + +Q +K EG+ +++ AL A + + A K+ M E
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEV 481
G + N+ N+LI S G E++ ++ + E G+ PD Y +L++ + K +
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 482 PIIYKR-METDGCTPDRK 498
++++ ME D T R+
Sbjct: 522 MEVFRKCMERDHKTVTRR 539
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/440 (19%), Positives = 158/440 (35%), Gaps = 12/440 (2%)
Query: 63 FPNPEAPRPGEELSSEFYSQLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEAL 122
F N A +PG S Y + +L Q+++ L S Y LI+ L
Sbjct: 68 FFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTL 127
Query: 123 GNVGRTSEADMLFKEMIYCGLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTR 182
+ A + +E G + ++ N +M G+
Sbjct: 128 VLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNT 187
Query: 183 ETYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATE---- 238
+ + + +F + ++E+K N I+ L + + K + E
Sbjct: 188 LGFGVYIGWFCRSSETNQLLRLVDEVKKANLNING----SIIALLILHSLCKCSREMDAF 243
Query: 239 -VLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWH 297
+LEE+R D Y I + F G L E + K +K GV P + + I
Sbjct: 244 YILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDL 303
Query: 298 CREGDYTKALNLFSDMQEQGLYP-DPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY 356
T+A + +++ G +P D I +I + D+ + M S G
Sbjct: 304 ISAKRLTEAKEV-AEVIVSGKFPMDNDILDALIGSVSAVDP-DSAVEFLVYMVSTGKLPA 361
Query: 357 GAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
+ L ++ K + + + L S+G + + + + G ++ LQ
Sbjct: 362 IRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQ 421
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTK 476
M+ EG+ P++ + N LI A A A ++ + G +L TY L++
Sbjct: 422 EMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEG 481
Query: 477 KFDEVPIIYKRMETDGCTPD 496
+ +E ++ +M G PD
Sbjct: 482 EAEESLRLFDKMLERGIEPD 501
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 48/318 (15%)
Query: 213 FQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEAL 272
++ ++F+ S ++ +Y G A +V ++ E+ D ++N++I + + EAL
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEAL 203
Query: 273 KLFVKMQKEGVRPNIVTWNSLI----------------KWHCREG--------------- 301
L M+ G++P+++TWN+LI + C +G
Sbjct: 204 NLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL 263
Query: 302 ----DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYG 357
KA + F M GLYP+ +T++ K+ G + +G
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG 323
Query: 358 AVYAVLVDIFGQYGKFQNAEECVQAL-KSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQ 416
V + L+D++G+ G A + K V + IFC YA GL ++A+++
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFC-----YANHGLADKAVELFD 378
Query: 417 IMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIRT 475
ME G + + + ++ A S+AG +++ ++ + P L Y ++ R
Sbjct: 379 QMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRA 438
Query: 476 KKFDEVPIIYK--RMETD 491
K E + K RME D
Sbjct: 439 GKLVEAYEMIKAMRMEPD 456
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 126/264 (47%), Gaps = 18/264 (6%)
Query: 252 THIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFS 311
T I ++ + + G++ +A K+F +M K + +V +I R G Y ++L+ F
Sbjct: 51 TRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVV----MIGACARNGYYQESLDFFR 106
Query: 312 DMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKY-----GAVYAVLVDI 366
+M + GL D I +++ + + + + F M K+ + + L+D+
Sbjct: 107 EMYKDGLKLDAFIVPSLL-----KASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDM 161
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPN 426
+ ++G+ NA + L + ++V F A+ + YA ++A+ +++ M+ GI+P+
Sbjct: 162 YSKFGEVGNARKVFSDLGEQDLVV----FNAMISGYANNSQADEALNLVKDMKLLGIKPD 217
Query: 427 IVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
++ N LI+ FS+ + + + G PD+V++T+++ + + ++ +K
Sbjct: 218 VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 487 RMETDGCTPDRKAKQMLQDALTAL 510
+M T G P+ L A T L
Sbjct: 278 QMLTHGLYPNSATIITLLPACTTL 301
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 137/362 (37%), Gaps = 20/362 (5%)
Query: 82 QLISKCCKEGNLDRAMSLLAQMEALGFQLSSYSYTHLIEALGNVGRTSEADMLFKEMIYC 141
+ SK + GN + S L + + + F +I N + EA L K+M
Sbjct: 160 DMYSKFGEVGNARKVFSDLGEQDLVVFN-------AMISGYANNSQADEALNLVKDMKLL 212
Query: 142 GLKPRLNLYNIXXXXXXXXXXXXXXXXXXXEMVDSGIWRTRETYEILLDYFVSAGRLEDT 201
G+KP + +N M G ++ ++ V + E
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 202 WSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDT 261
+ +M G PNS ++ K E+ + + ++++D
Sbjct: 273 FDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDM 332
Query: 262 FGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPD 321
+GK G + EA+ LF K K+ VT+NS+I + G KA+ LF M+ G D
Sbjct: 333 YGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLD 388
Query: 322 PKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAV-----YAVLVDIFGQYGKFQNA 376
F I++ G D + F M KY V YA +VD+ G+ GK A
Sbjct: 389 HLTFTAILTACSHAGLTDLGQNLFLLM----QNKYRIVPRLEHYACMVDLLGRAGKLVEA 444
Query: 377 EECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINA 436
E ++A++ E L A + L A K L +E E +++ ++ NA
Sbjct: 445 YEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANA 504
Query: 437 FS 438
S
Sbjct: 505 GS 506
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 251 DTHIYNSIIDTFGKYGELGEALKLFVKMQKEG---------------VRPNIVTWNSLIK 295
D Y SI T G+ G + E + M+ + P++V +N+++
Sbjct: 542 DMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLN 601
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
+ + A + ++++G P P + I+ + K++ + + F M + +
Sbjct: 602 ACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKM-QKSSIP 660
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
Y VLV+ + GK A V+ ++S G++ S ++ LA G C + + +L
Sbjct: 661 NALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNML 720
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRT 475
+ + +P +V LI A ++G A ++ +K+ SP+LVT ++KA+++
Sbjct: 721 KKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQG 779
Query: 476 KKFDEVPIIYKRMETDG 492
F+E ++++M DG
Sbjct: 780 GLFEEARELFQKMSEDG 796
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 123/290 (42%), Gaps = 31/290 (10%)
Query: 231 GMWKKATEVLEEIRER------KISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE-GV 283
G W++ +V+E ++ + KI + IY + ++ GK EAL +F M +
Sbjct: 483 GNWRRVLQVIEWLQRQDRYKSNKIRI---IYTTALNVLGKSRRPVEALNVFHAMLLQISS 539
Query: 284 RPNIVTWNSLIKWHCREGDYTKALNLFSDMQ---------------EQGLYPDPKIFVTI 328
P++V + S+ + G + + M+ + L PD ++ +
Sbjct: 540 YPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAV 599
Query: 329 ISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGV 388
++ ++ +W+ + + RG K Y +++++ K+ E + ++ +
Sbjct: 600 LNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI 659
Query: 389 LVSPNIFC--ALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEA 446
PN L N ++G ++A+ ++ ME GI + + L +AGR E
Sbjct: 660 ---PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEG 716
Query: 447 MSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRMETDGCTPD 496
+++ I P +VTYT L++A + + I+ +M+ C+P+
Sbjct: 717 LNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKK-VCSPN 765
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 13/181 (7%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEI 243
Y +L++ G+ ++ T+ +M+ +G ++ +Y + G + +L++I
Sbjct: 664 AYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKI 723
Query: 244 RERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDY 303
Y +I G + A +F +M+K PN+VT N ++K + + G +
Sbjct: 724 CRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKK-VCSPNLVTCNIMLKAYLQGGLF 782
Query: 304 TKALNLFSDMQEQG------------LYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+A LF M E G + PD F T++ EQ KWD + M
Sbjct: 783 EEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRH 842
Query: 352 G 352
G
Sbjct: 843 G 843
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 130/287 (45%), Gaps = 23/287 (8%)
Query: 210 MKGFQP---NSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYG 266
+K +P + FV + +VG Y + G ++A + E IRE D +N+++ +
Sbjct: 140 LKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREP----DLATWNTLLAAYANSE 195
Query: 267 ELG---EALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPK 323
E+ E L LF++MQ VRPN ++ +LIK G++ + + + + L +
Sbjct: 196 EIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 324 IFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGA-VYAVLVDIFGQYGKFQNAEECVQA 382
+ ++I + G +K F+ M+ R Y A + + V FGQ G E ++
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGI-----ELYKS 307
Query: 383 LKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEG-EGIEPNIVMLNMLINAFSNAG 441
L S+G++ F +A + GL ++ +++ M+ GIEP + L++ +G
Sbjct: 308 LISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 442 RYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKRM 488
R EA IK+ V P+ + + + + F+ I K +
Sbjct: 368 RLEEAEEC---IKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHL 411
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 18/260 (6%)
Query: 208 MKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGE 267
M+M+ +PN ++ + G + + + + ++L+ + S+ID + K G
Sbjct: 208 MRMQ-VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGC 266
Query: 268 LGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVT 327
L A K+F +M + ++ +N++I+ G + + L+ + QGL PD FV
Sbjct: 267 LSFARKVFDEMSQR----DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVV 322
Query: 328 IISCLGEQGKWDTIKKCFESMTS-RGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSE 386
IS G D + F SM + G + Y LVD+ G+ G+ + AEEC++ +
Sbjct: 323 TISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMP-- 380
Query: 387 GVLVSPNI-----FCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNML--INAFSN 439
V PN F + + E A+K L +E E +++ N+ +N +++
Sbjct: 381 ---VKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTD 437
Query: 440 AGRYMEAMSVYHHIKESGVS 459
+ E M + K G+S
Sbjct: 438 VEKTRELMKDHRVNKSPGIS 457
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 122/270 (45%), Gaps = 17/270 (6%)
Query: 223 IVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEG 282
+ G +D M + +++EE +++ + N++++ + K G + EA +F +M+
Sbjct: 227 VCGHLKDLEMGRNVHKLVEE---KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME--- 280
Query: 283 VRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIK 342
R +++TW +I + +GD AL L MQ +G+ P+ +++S G+ K +
Sbjct: 281 -RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND-G 338
Query: 343 KCFESMTSRGNKKYGAVYAVLV---DIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALA 399
KC R VY+ ++ + Y K + + C + S + A+
Sbjct: 339 KCLHGWAVRQQ-----VYSDIIIETSLISMYAKCKRVDLCFRVF-SGASKYHTGPWSAII 392
Query: 400 NAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVS 459
Q L A+ + + M E +EPNI LN L+ A++ +AM+++ ++ ++G
Sbjct: 393 AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452
Query: 460 PDLVTYTTLMKAFIRTKKFDEVPIIYKRME 489
L T L+ + + + I+ ++
Sbjct: 453 SSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 128/298 (42%), Gaps = 10/298 (3%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQ--PNSFVYSKIVGLYRDNGMWKKATEVLE 241
+Y I++ +V G D S M +G + P+ + Y + + K V
Sbjct: 82 SYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHG 141
Query: 242 EIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREG 301
I D ++ N+++ + +G++ A +F M+ ++++WN++I + R G
Sbjct: 142 RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR----DVISWNTMISGYYRNG 197
Query: 302 DYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYA 361
AL +F M + + D V+++ G + + + + + V
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 362 VLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGE 421
LV+++ + G+ A ++ V+ + + N Y + G E A+++ ++M+ E
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERRDVIT----WTCMINGYTEDGDVENALELCRLMQFE 313
Query: 422 GIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFD 479
G+ PN V + L++ +A + + ++ V D++ T+L+ + + K+ D
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 111/266 (41%), Gaps = 31/266 (11%)
Query: 184 TYEILLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRD-----NGM----WK 234
T+ +++ + G +E+ M+ +G +PN+ + +V + D +G W
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
Query: 235 KATEVLEEI-----------RERKISL-----------DTHIYNSIIDTFGKYGELGEAL 272
+V +I + +++ L T +++II + + +AL
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDAL 405
Query: 273 KLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCL 332
LF +M++E V PNI T NSL+ + D +A+N+ + + G ++
Sbjct: 406 GLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 333 GEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSP 392
+ G ++ K F + + K ++ L+ +G +G NA + + GV +
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNE 525
Query: 393 NIFCALANAYAQQGLCEQAIKVLQIM 418
F + NA + GL E+ + + + M
Sbjct: 526 ITFTSALNACSHSGLVEEGLTLFRFM 551
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 96/264 (36%), Gaps = 42/264 (15%)
Query: 198 LEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNS 257
+ D M+ + +PN + ++ Y ++A + + +
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG 460
Query: 258 IIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQG 317
++ + K G L A K+F +Q++ ++V W +LI + GD AL +F +M G
Sbjct: 461 LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
Query: 318 LYPDPKIFVTIISCLGEQGKWDTIKKCFESM------TSRGNKKYGAVYAVLVDIFGQYG 371
+ P+ F + ++ G + F M +R N Y +VD+ G+ G
Sbjct: 521 VTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNH-----YTCIVDLLGRAG 575
Query: 372 KFQNAEECVQALKSE------GVLVSPNI-------------------------FCALAN 400
+ A + + E G L++ + + LAN
Sbjct: 576 RLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLAN 635
Query: 401 AYAQQGLCEQAIKVLQIMEGEGIE 424
YA G + KV +ME G+
Sbjct: 636 IYAALGRWKDMEKVRSMMENVGLR 659
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 17/221 (7%)
Query: 174 VDSG-IWRTRETYEI-----------LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYS 221
VDSG + R ++ +E+ L++ F G E ST EM KG +PN + +
Sbjct: 238 VDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297
Query: 222 KIVGLYRDNGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKE 281
++ +G + I + I LD I +++D + K GEL A +F M +
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 282 GVRPNIVTWNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTI 341
+I++W ++I+ G + +A+ F M G PD +F+ +++ + D
Sbjct: 358 ----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Query: 342 KKCFESMT-SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQ 381
F+SM + Y ++VD+ G+ GK A E V+
Sbjct: 414 LNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVE 454
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 137/322 (42%), Gaps = 18/322 (5%)
Query: 173 MVDSGIWRTRETYEILLDYFVSAGRLEDTW--STINEMKMKGF-QPNSFVYSKIVGLYRD 229
M+ G+ R T+ +L S +L W ++ +K F +SFV +V +Y
Sbjct: 117 MLRLGVKPDRLTFPFVLK---SNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAK 173
Query: 230 NGMWKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVT 289
G K A +V EE +R I+N +I+ + + ++ A LF M + N +
Sbjct: 174 TGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGS 229
Query: 290 WNSLIKWHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMT 349
W++LIK + G+ +A LF M E+ + + T+I+ + G ++T + M
Sbjct: 230 WSTLIKGYVDSGELNRAKQLFELMPEKNVVS----WTTLINGFSQTGDYETAISTYFEML 285
Query: 350 SRGNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCE 409
+G K A ++ + G + + G+ + I AL + YA+ G +
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELD 345
Query: 410 QAIKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLM 469
A V M +I+ +I ++ GR+ +A+ + + SG PD V + ++
Sbjct: 346 CAATVFSNMN----HKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 470 KAFIRTKKFDEVPIIYKRMETD 491
A + + + D + M D
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLD 423
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 137/310 (44%), Gaps = 16/310 (5%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
L+D + G+L+ + E + + + +++ ++ Y AT + + ER
Sbjct: 167 LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER- 225
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
++ ++++I + GEL A +LF M ++ N+V+W +LI + GDY A+
Sbjct: 226 ---NSGSWSTLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETAI 278
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
+ + +M E+GL P+ ++S + G + + + G K A+ LVD++
Sbjct: 279 STYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
+ G+ A + + +L + A+ +A G QAI+ + M G +P+
Sbjct: 339 AKCGELDCAATVFSNMNHKDILS----WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE 394
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIK-ESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYK 486
V+ ++ A N+ ++ + ++ + + P L Y ++ R K +E + +
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVE 454
Query: 487 RMETDGCTPD 496
M + PD
Sbjct: 455 NMPIN---PD 461
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 115/249 (46%), Gaps = 12/249 (4%)
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKAL 307
+ D+ + S++D + K G+L A ++F + + +I+ WN LI +CR D A
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMAT 216
Query: 308 NLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIF 367
LF M E+ + + T+I + G+ + K+ FE M +K + L++ F
Sbjct: 217 TLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTLINGF 268
Query: 368 GQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNI 427
Q G ++ A + +G+ + A+ +A ++ G I++ + GI+ +
Sbjct: 269 SQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDR 328
Query: 428 VMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKAFIRTKKFDEVPIIYKR 487
+ L++ ++ G A +V+ ++ D++++T +++ + +F + +++
Sbjct: 329 AIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQ 384
Query: 488 METDGCTPD 496
M G PD
Sbjct: 385 MMYSGEKPD 393
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
Query: 236 ATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIK 295
A +V +E+ ER D +NS++ + + G++ +A LF M + IV+W ++I
Sbjct: 163 AHKVFDEMYER----DVISWNSLLSGYARLGQMKKAKGLFHLM----LDKTIVSWTAMIS 214
Query: 296 WHCREGDYTKALNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKK 355
+ G Y +A++ F +MQ G+ PD ++++ + G + K RG K
Sbjct: 215 GYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLK 274
Query: 356 YGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVL 415
V L++++ + G A + ++ + V+ + + + YA G AI+
Sbjct: 275 QTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS----WSTMISGYAYHGNAHGAIETF 330
Query: 416 QIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKES-GVSPDLVTYTTLMKAFIR 474
M+ ++PN + L++A S+ G + E + + +++ + P + Y L+ R
Sbjct: 331 NEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLAR 390
Query: 475 TKKFDEVPIIYKRMETDGCTPDRK 498
K + I K M PD K
Sbjct: 391 AGKLERAVEITKTMPM---KPDSK 411
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 104/240 (43%), Gaps = 16/240 (6%)
Query: 233 WKKATEVLEEIRERKISLDTHIYNSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNS 292
WKK I +S + + ++D K ++ A +LF ++ PN+ +NS
Sbjct: 26 WKKINA---SIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSN----PNVFLYNS 78
Query: 293 LIKWHCREGDYTKALNLFSDMQEQGL-YPDPKIFVTIISCLGEQGKWDTIKKCFESMTSR 351
+I+ + Y + ++ + + PD F + G K+ +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 352 GNKKYGAVYAVLVDIFGQYGKFQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQA 411
G + + L+D++ ++ +A + + V +S N +L + YA+ G ++A
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV-ISWN---SLLSGYARLGQMKKA 194
Query: 412 IKVLQIMEGEGIEPNIVMLNMLINAFSNAGRYMEAMSVYHHIKESGVSPDLVTYTTLMKA 471
+ +M ++ IV +I+ ++ G Y+EAM + ++ +G+ PD ++ +++ +
Sbjct: 195 KGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 131/289 (45%), Gaps = 23/289 (7%)
Query: 200 DTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRE-----RKISLDTHI 254
+ +S E+ G P+++ + ++ + LEE R+ K+ LD ++
Sbjct: 112 EVFSLFVEILEDGILPDNYTFPSLLKAC-------AVAKALEEGRQLHCLSMKLGLDDNV 164
Query: 255 Y--NSIIDTFGKYGELGEALKLFVKMQKEGVRPNIVTWNSLIKWHCREGDYTKALNLFSD 312
Y ++I+ + + ++ A +F ++ V P +V +N++I + R +AL+LF +
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRI----VEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 313 MQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDIFGQYGK 372
MQ + L P+ ++++S G D K + KY V L+D+F + G
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 373 FQNAEECVQALKSEGVLVSPNIFCALANAYAQQGLCEQAIKVLQIMEGEGIEPNIVMLNM 432
+A + ++ + + A+ AYA G E+++ + + M E ++P+ +
Sbjct: 281 LDDAVSIFEKMRYKDT----QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 433 LINAFSNAGRYMEAMSVYHH-IKESGVSPDLVTYTTLMKAFIRTKKFDE 480
L+NA S+ GR E + + + G+ P + Y +++ R ++
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 9/206 (4%)
Query: 188 LLDYFVSAGRLEDTWSTINEMKMKGFQPNSFVYSKIVGLYRDNGMWKKATEVLEEIRERK 247
L+D F G L+D S +M+ K Q +S ++ Y ++G +K+ + E +R
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQ----AWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 248 ISLDTHIYNSIIDTFGKYGELGEALKLFVKM-QKEGVRPNIVTWNSLIKWHCREGDYTKA 306
+ D + +++ G + E K F +M K G+ P+I + S++ R G+ A
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDA 386
Query: 307 LNLFSDMQEQGLYPDPKIFVTIISCLGEQGKWDTIKKCFESMTSRGNKKYGAVYAVLVDI 366
+ + P P ++ +++ D +K E + + +G Y +L ++
Sbjct: 387 YEFIDKLP---ISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDD-SHGGDYVILSNL 442
Query: 367 FGQYGKFQNAEECVQALKSEGVLVSP 392
+ + K++ + + +K + P
Sbjct: 443 YARNKKWEYVDSLRKVMKDRKAVKVP 468