Miyakogusa Predicted Gene

Lj2g3v2103100.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2103100.2 Non Chatacterized Hit- tr|I1LG46|I1LG46_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19073 PE,49.56,5e-18,no
description,NULL; seg,NULL,CUFF.38584.2
         (232 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G71480.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   245   2e-65
AT5G41470.1 | Symbols:  | Nuclear transport factor 2 (NTF2) fami...   121   5e-28

>AT1G71480.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein | chr1:26932079-26933086 FORWARD LENGTH=216
          Length = 216

 Score =  245 bits (625), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 113/147 (76%), Positives = 127/147 (86%)

Query: 86  SAESVVRNFYGGVNVHDVDSVEHLIAEDCVYEDLVFSQPFVGRKEIIEFFRKFTKSTSTD 145
           SA  VV +FY  VNVHD+ SV  LIA+DCVYEDLVFS PFVGRK I++FF KF +STSTD
Sbjct: 70  SASEVVSSFYAAVNVHDLSSVTDLIAQDCVYEDLVFSSPFVGRKAILDFFGKFIESTSTD 129

Query: 146 LQFVIDDLSTKDSSSVGVIWHLEWKGKPFPFSKGCSFYRLEVIDGKRQITYGRDCVEPAI 205
           LQFVIDD+ST+DSS+VGV WHLEWKGK FPFSKGCSFYRLEVIDGKRQI YGRDCVEPAI
Sbjct: 130 LQFVIDDISTEDSSAVGVSWHLEWKGKNFPFSKGCSFYRLEVIDGKRQIVYGRDCVEPAI 189

Query: 206 KPGDATLAVIRSVTWILQQFPQLADRL 232
           KPG+  LA I+ VTW+LQ+FPQLAD+ 
Sbjct: 190 KPGETVLAAIKGVTWLLQKFPQLADQF 216


>AT5G41470.1 | Symbols:  | Nuclear transport factor 2 (NTF2) family
           protein | chr5:16593953-16595419 FORWARD LENGTH=277
          Length = 277

 Score =  121 bits (303), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 6/170 (3%)

Query: 63  GEERSVTVASPDSASFGDDKVVDSAESVVRNFYGGVNVHDVDSVEHLIAEDCVYEDLVFS 122
              R++ V+  D  +   +++  S    V  FY  +N  + D +   I+ DC  +D  F 
Sbjct: 53  ASRRNIVVSCLDRPNSRPNQI--SGYDAVMKFYSSINEKNQDQLSSCISSDCFIDDFSFP 110

Query: 123 QPFVGRKEIIEFFRKFTKSTSTDLQFVIDDLSTKDSSSVGVIWHLEWKGKPFPFSKGCSF 182
           +PF G++E +EFF +  KS   +++F ++++   D  S  V WHLEWKG+  PF++GCSF
Sbjct: 111 KPFRGKQEAMEFFEELVKSMGQNVKFCVENVCEGDGHSAAVNWHLEWKGRKIPFTRGCSF 170

Query: 183 YRLEVID--GKRQITYGRDCVEPAIKPGDATLAVIRSVTWILQQFPQLAD 230
           Y  E ID  G+  I   R  +E  IKPG  TL++++++T++  +FP+ A+
Sbjct: 171 Y--EFIDEGGRLVIRNARILIESPIKPGGITLSLLKNITFLFDEFPKGAE 218