Miyakogusa Predicted Gene
- Lj2g3v2103090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2103090.1 Non Chatacterized Hit- tr|I1M4S0|I1M4S0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26361
PE,85.11,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptid,CUFF.38583.1
(674 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 874 0.0
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 536 e-152
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 526 e-149
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 521 e-148
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 520 e-147
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 510 e-144
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 505 e-143
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 500 e-141
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 480 e-135
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 479 e-135
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 478 e-135
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 472 e-133
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 470 e-132
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 470 e-132
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 467 e-131
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 465 e-131
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 465 e-131
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 464 e-131
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 464 e-130
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 460 e-129
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 458 e-129
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 455 e-128
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 454 e-127
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 448 e-126
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 447 e-126
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 447 e-125
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 446 e-125
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 445 e-125
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-124
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 440 e-123
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 439 e-123
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 439 e-123
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 438 e-123
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 438 e-123
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 436 e-122
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 435 e-122
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-119
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 426 e-119
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-119
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 423 e-118
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 423 e-118
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 422 e-118
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-117
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 412 e-115
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 412 e-115
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 412 e-115
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 411 e-115
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 408 e-114
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 407 e-113
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 406 e-113
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 397 e-111
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 395 e-110
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-108
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 382 e-106
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 377 e-104
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 377 e-104
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 363 e-100
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 3e-97
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 5e-96
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 4e-95
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 5e-95
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 5e-95
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 339 3e-93
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 2e-92
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 7e-92
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 1e-89
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 5e-89
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 7e-89
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 8e-88
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 8e-86
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 314 1e-85
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 314 1e-85
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 5e-84
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 7e-83
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 305 9e-83
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 304 1e-82
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 301 8e-82
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 4e-81
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 1e-80
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 5e-80
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 294 2e-79
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 293 2e-79
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 7e-79
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 290 3e-78
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 288 8e-78
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 286 4e-77
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 5e-77
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 1e-76
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 2e-76
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 281 1e-75
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 9e-73
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 9e-73
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 5e-72
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 269 5e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 268 1e-71
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 265 8e-71
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 256 4e-68
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 9e-68
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 2e-64
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 8e-64
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 236 5e-62
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 5e-58
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 9e-57
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 2e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 1e-52
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 5e-52
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 8e-30
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 119 6e-27
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 112 8e-25
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 9e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-24
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 109 5e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 109 6e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 108 1e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 108 1e-23
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 104 2e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 3e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 103 3e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 6e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 93 7e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-18
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 4e-18
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 89 7e-18
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 87 3e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 3e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 3e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 4e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 83 7e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 82 9e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 79 1e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 77 4e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 74 3e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 73 6e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 71 2e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 70 6e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 68 2e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 67 3e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 9e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 5e-10
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 58 3e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 58 3e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 51 2e-06
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/637 (64%), Positives = 502/637 (78%)
Query: 38 NNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSS 97
N F EAI+ LC QK L+EAV LL +P Y LI C + RALE+G++VH ++S
Sbjct: 55 NRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTS 114
Query: 98 NFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
F+PGI I NRLL +YAKCGSL DA+++FDEM +RDLCSWN M+ GYA++G LE+ARKLF
Sbjct: 115 GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLF 174
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
DEM +D +SW A ++GYV +P EAL ++ +MQ+ +S N FT+S +AAAAA+ C+
Sbjct: 175 DEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
R GKEIHG++VRAGLD DEV+WS+L+D+YGKCG +DEAR IFD++V+KDVVSWT+MI R
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
F+ R EGFSLF +L+GS RPNEYTF GVL ACAD E LGK+VHGYM RVG+DP S
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
FA S+LVD+Y+KCGN + A V + P+PDLVSWTSLIGG AQNGQPD AL +F+LLLKS
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
GTKPD +TFV VLSACTHAGLV+KGLE+F+SI EKH L HT+DHY C++DLLARSGRF +
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ 474
Query: 458 AENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYAN 517
+++I M +KP KFLWAS+LGGC +GNI+LA+ AA LF+IEPENP TY+T+ANIYA
Sbjct: 475 LKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAA 534
Query: 518 AGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKK 577
AG+W EE K+RK M+ G+ K+PG SW EIKR+ HVF+ DTSHP I EFL EL KK
Sbjct: 535 AGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKK 594
Query: 578 MKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDC 637
MKEEGYVP T+ VLHDVE+EQKE+NL YHSEKLAVAF I+ST GT IKVFKNLR+CVDC
Sbjct: 595 MKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDC 654
Query: 638 HTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
H A+K+ S I +RKI +RDS RFHCFE+G CSC DYW
Sbjct: 655 HGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 536 bits (1381), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/659 (40%), Positives = 398/659 (60%), Gaps = 34/659 (5%)
Query: 50 QKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRL 109
K ++ D++ P+ + ++A+ R +E G++VH+ + +SN L
Sbjct: 128 HKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 110 LDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWN 169
L++YAKCG A+ +FD M RD+ SWN MIA + ++G ++ A F++M RD +WN
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247
Query: 170 AAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR 229
+ ISG+ G AL++F M + + ++FTL+S L+A A + L +GK+IH ++V
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 230 AGLDLDEVVWSALLDLYGKCGS---------------------------------LDEAR 256
G D+ +V +AL+ +Y +CG +++A+
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
IF + D+DVV+WT MI + G E +LFR ++G G RPN YT +L + A
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLI 375
+ GK++HG ++ G +AL+ +Y+K GN ASR F+ I D VSWTS+I
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
AQ+G + AL FE +L G +PD IT+VGV SACTHAGLV++G +YF +K+ +
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAAN 495
+ T HYAC++DL R+G EA+ I+ M I+PD W SLL CR+H NI+L K AA
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAE 607
Query: 496 ALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFL 555
L +EPEN Y LAN+Y+ G+W E AK+RK M+ + K+ G SWIE+K +VHVF
Sbjct: 608 RLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFG 667
Query: 556 VGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFG 615
V D +HP+ +I+ + ++ ++K+ GYVPDT VLHD+EEE KEQ L +HSEKLA+AFG
Sbjct: 668 VEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFG 727
Query: 616 IISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
+ISTP T +++ KNLR C DCHTA+K+ SK+V R+II+RD+ RFH F+DG CSC+DYW
Sbjct: 728 LISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 237/501 (47%), Gaps = 75/501 (14%)
Query: 63 VDRPSPRLYSTLIAACVR--HRALEQ------GRRVHALTKSSNFIPGIFISNRLLDLYA 114
+D P P STL+ C +++ + + VH S + +++ N L+++Y+
Sbjct: 1 MDAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYS 60
Query: 115 KCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISG 174
K G A++LFDEM R SWNT+++ Y+K G ++ + FD++P+RD SW I G
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 175 YVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL 234
Y + G+ +A+ + M K E +FTL++ LA+ AA C+ GK++H ++V+ GL
Sbjct: 121 YKNIGQYHKAIRVMGDMVK-EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRG 179
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLF---- 290
+ V ++LL++Y KCG A+ +FD+MV +D+ SW MI + G+ + + F
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 291 -RDL-----MGSG----------------------VRPNEYTFTGVLKACADHAAEHLGK 322
RD+ M SG + P+ +T VL ACA+ +GK
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR------------------------ 358
++H +++ G+D +AL+ +YS+CG + A R
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 359 ---------VFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGV 409
+F + D+V+WT++I G+ Q+G A++ F ++ G +P+ T +
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 410 LSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKP 469
LS + + G + H K G +++ +I + A++G A D + +
Sbjct: 420 LSVASSLASLSHG-KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 470 DKFLWASLLGGCRIHGNIELA 490
D W S++ HG+ E A
Sbjct: 479 DTVSWTSMIIALAQHGHAEEA 499
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 249/568 (43%), Positives = 367/568 (64%), Gaps = 9/568 (1%)
Query: 107 NRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHF 166
N LL + K + +A++ FD M RD+ SWNT+I GYA+ G +++AR+LFDE P +D F
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGY 226
+W A +SGY+ + EA E+F M + N+ + ++ LA + + KE+
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPER-----NEVSWNAMLAGYVQGERMEMAKELFDV 337
Query: 227 LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEG 286
+ + W+ ++ Y +CG + EA+ +FD+M +D VSW MI + G E
Sbjct: 338 MPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
LF + G R N +F+ L CAD A LGK++HG +++ GY+ G F G+AL+ +
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y KCG+ + A+ +F ++ D+VSW ++I G++++G + AL FFE + + G KPD T
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
V VLSAC+H GLVDKG +YF+++ + +G+M + HYAC++DLL R+G +A N++ NM
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAK 526
+PD +W +LLG R+HGN ELA+ AA+ +F +EPEN Y+ L+N+YA++G+W + K
Sbjct: 574 FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGK 633
Query: 527 VRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPD 586
+R M +G+ K PG SWIEI+ + H F VGD HP+ +I FL EL +MK+ GYV
Sbjct: 634 LRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSK 693
Query: 587 TNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSK 646
T+ VLHDVEEE+KE+ + YHSE+LAVA+GI+ G PI+V KNLR C DCH A+KY ++
Sbjct: 694 TSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAR 753
Query: 647 IVQRKIILRDSNRFHCFEDGSCSCKDYW 674
I R IILRD+NRFH F+DGSCSC DYW
Sbjct: 754 ITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 214/458 (46%), Gaps = 39/458 (8%)
Query: 43 AINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPG 102
AI++ + R EA+ + + R S Y+ +I+ +R+ E R++ + +
Sbjct: 70 AISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 103 IFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPR 162
N ++ Y + +L A+ LF+ M +RD+CSWNTM++GYA+ G ++ AR +FD MP
Sbjct: 130 ----NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
++ SWNA +S YV + + EA +F+ + + N L G I R +
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN--CLLGGFVKKKKIVEAR--QF 241
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
VR D V W+ ++ Y + G +DEAR +FD+ +DV +WT M+ ++
Sbjct: 242 FDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGS- 341
EE LF + NE ++ +L + KE+ M P +
Sbjct: 297 VEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVM------PCRNVSTW 346
Query: 342 -ALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTK 400
++ Y++CG A +F+++P+ D VSW ++I G++Q+G AL F + + G +
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 401 PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG-LMHTADHYACVID-----LLARSGR 454
++ +F LS C ++ G K+ HG L+ C + + + G
Sbjct: 407 LNRSSFSSALSTCADVVALELG-------KQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 455 FNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKR 492
EA ++ M+ K D W +++ G HG E+A R
Sbjct: 460 IEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALR 496
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 160/351 (45%), Gaps = 27/351 (7%)
Query: 130 GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFR 189
GD D+ WN I+ Y + G +A ++F MPR S+N ISGY+ +G A ++F
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
M + + +S + + LGK + + + D W+ +L Y +
Sbjct: 120 EMPERD-------LVSWNVMIKGYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQN 170
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
G +D+AR +FD+M +K+ VSW ++ ++ + EE LF+ + G +
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
K A ++ D S+ + ++ Y++ G A ++F++ P D+
Sbjct: 231 KKKKIVEARQFFDSMN------VRDVVSW--NTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
+WT+++ G+ QN + A F+ + + +++++ +L+ ++ E F +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
++ + +I A+ G+ +EA+N+ D M K D WA+++ G
Sbjct: 339 PCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 55 EAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
EA+ L ++R RL +S+ ++ C ALE G+++H + G F+ N LL
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 451
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHF 166
+Y KCGS+ +A LF EM +D+ SWNTMIAGY++ G+ E A + F+ M R D
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHES--SNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
+ A +S G + + F M + NS + L A L ++ H
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG-----LLEDAH 566
Query: 225 GYLVRAGLDLDEVVWSALL 243
+ + D +W LL
Sbjct: 567 NLMKNMPFEPDAAIWGTLL 585
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 521 bits (1341), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/619 (41%), Positives = 385/619 (62%), Gaps = 16/619 (2%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKC---GSLADA 122
P ++ +++ +C L G VH ++ N L+++YAK GS
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 123 QRLFDEM-------GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGY 175
+FDEM GD D+ + T I + ++ R++F+ MPR+D S+N I+GY
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKA-ETCIMPFG----IDSVRRVFEVMPRKDVVSYNTIIAGY 217
Query: 176 VSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLD 235
G +AL M R M + + FTLSS L + + GKEIHGY++R G+D D
Sbjct: 218 AQSGMYEDALRMVREMGTTDL-KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD 276
Query: 236 EVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG 295
+ S+L+D+Y K ++++ +F ++ +D +SW +++ ++GR E LFR ++
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT 336
Query: 296 SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKI 355
+ V+P F+ V+ ACA A HLGK++HGY++R G+ F SALVD+YSKCGN K
Sbjct: 337 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKA 396
Query: 356 ASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTH 415
A ++F+++ D VSWT++I G A +G A+ FE + + G KP+Q+ FV VL+AC+H
Sbjct: 397 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 456
Query: 416 AGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWA 475
GLVD+ YF+S+ + +GL +HYA V DLL R+G+ EA N I M ++P +W+
Sbjct: 457 VGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWS 516
Query: 476 SLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
+LL C +H N+ELA++ A +F ++ EN Y+ + N+YA+ G+W E AK+R M +G
Sbjct: 517 TLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKG 576
Query: 536 IVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVE 595
+ KKP SWIE+K + H F+ GD SHP + I+EFL + ++M++EGYV DT+ VLHDV+
Sbjct: 577 LRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVD 636
Query: 596 EEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILR 655
EE K + LF HSE+LAVAFGII+T PGT I+V KN+R C DCH A+K+ SKI +R+II+R
Sbjct: 637 EEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVR 696
Query: 656 DSNRFHCFEDGSCSCKDYW 674
D++RFH F G+CSC DYW
Sbjct: 697 DNSRFHHFNRGNCSCGDYW 715
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 134/310 (43%), Gaps = 41/310 (13%)
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
K++H +R L S ++ +Y L EA +F + V++W ++I RCF
Sbjct: 24 AKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVI-RCFT 81
Query: 280 DGRR-EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
D + + F ++ SG P+ F VLK+C G+ VHG+++R+G D +
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 339 AGSALVDLYSK---------CGNT---------------------------KIASRVFNQ 362
G+AL+++Y+K GN RVF
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 363 IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
+PR D+VS+ ++I G+AQ+G + AL + + KPD T VL + V KG
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 423 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCR 482
E H + G+ + ++D+ A+S R ++E + + + D W SL+ G
Sbjct: 262 KE-IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSLVAGYV 319
Query: 483 IHGNIELAKR 492
+G A R
Sbjct: 320 QNGRYNEALR 329
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 44/243 (18%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+ Q R EA+ L + +P +S++I AC L G+++H F
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
IFI++ L+D+Y+KCG++ A+++FD M D SW +I G+A G +A LF+E
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 160 MPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
M R+ + ++ A ++ G EA F M K
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK---------------------- 472
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMI 274
L +E+ Y +A+ DL G+ G L+EA +M V+ W+T++
Sbjct: 473 VYGLNQELEHY-------------AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
Query: 275 HRC 277
C
Sbjct: 520 SSC 522
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/682 (37%), Positives = 398/682 (58%), Gaps = 44/682 (6%)
Query: 36 TNNNFEEAINALCQQKRLKEAVD----LLHHVDRPSPRLYSTLIAACVRHRALEQGRRVH 91
T +F I AL + K +++ + H P + L C A + G+++H
Sbjct: 80 TIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIH 139
Query: 92 ALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLE 151
++ S F+ + +Y +CG + DA+++FD M D+D+ + + ++ YA+ G LE
Sbjct: 140 CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLE 199
Query: 152 QARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSG 207
+ ++ EM + SWN +SG+ G +EA+ MF+ + H ++ T+SS
Sbjct: 200 EVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSV 258
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ------ 261
L + L +G+ IHGY+++ GL D+ V SA++D+YGK G + +F+Q
Sbjct: 259 LPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA 318
Query: 262 --------------MVDK---------------DVVSWTTMIHRCFEDGRREEGFSLFRD 292
+VDK +VVSWT++I C ++G+ E LFR+
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
+ +GV+PN T +L AC + AA G+ HG+ +RV GSAL+D+Y+KCG
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 353 TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
++ VFN +P +LV W SL+ GF+ +G+ + FE L+++ KPD I+F +LSA
Sbjct: 439 INLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
Query: 413 CTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKF 472
C GL D+G +YF + E++G+ +HY+C+++LL R+G+ EA ++I M +PD
Sbjct: 499 CGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSC 558
Query: 473 LWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDME 532
+W +LL CR+ N++LA+ AA LF +EPENP TY+ L+NIYA G W E +R ME
Sbjct: 559 VWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKME 618
Query: 533 IRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLH 592
G+ K PG SWI++K +V+ L GD SHP+I I E + E+SK+M++ G+ P+ +F LH
Sbjct: 619 SLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALH 678
Query: 593 DVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKI 652
DVEE+++EQ L+ HSEKLAV FG+++TP GTP++V KNLR C DCH +K+ S R+I
Sbjct: 679 DVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREI 738
Query: 653 ILRDSNRFHCFEDGSCSCKDYW 674
+RD+NRFH F+DG CSC D+W
Sbjct: 739 FIRDTNRFHHFKDGICSCGDFW 760
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 148/355 (41%), Gaps = 46/355 (12%)
Query: 222 EIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDG 281
+ H ++++G D + + L+ Y ++A + + D + S++++I+ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 282 RREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGS 341
+ +F + G+ P+ + + K CA+ +A +GK++H G D +F
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 342 ALVDLYSKCGNTKIASRVFNQIPRPD---------------------------------- 367
++ +Y +CG A +VF+++ D
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 368 -LVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
+VSW ++ GF ++G A+ F+ + G PDQ+T VL + + +++ G
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG-RLI 274
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
H K GL+ + +ID+ +SG ++ + + A + G R +G
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR-NGL 333
Query: 487 IELAKRAANALFEIEPE-----NPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
++ A +FE+ E N ++ ++ A G+ E ++ ++M++ G+
Sbjct: 334 VDKALE----MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/685 (40%), Positives = 404/685 (58%), Gaps = 67/685 (9%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAA----------CVRHRALEQ 86
NN+ AIN C+ K H +P +++++A CV+ A
Sbjct: 126 NNDGYSAINLFCKMK---------HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA-- 174
Query: 87 GRRVHALTKSSNFIPGIFISNRLLDLYAKCGS----LADAQRLFDEMGDRDLCSWNTMIA 142
AL + +I + SN L+ +Y+KC S L A+++FDE+ ++D SW TM+
Sbjct: 175 -----ALKSGAGYITSV--SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 143 GYAKLGWLEQARKLFDEMPRRDHF-SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNK 201
GY K G+ + +L + M ++NA ISGYV+ G +EALEM R M ++
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-SGIELDE 286
Query: 202 FTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ 261
FT S + A A L+LGK++H Y++R D ++L+ LY KCG DEAR IF++
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEK 345
Query: 262 MVDKDVVSWTT-------------------------------MIHRCFEDGRREEGFSLF 290
M KD+VSW MI E+G EEG LF
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 291 RDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKC 350
+ G P +Y F+G +K+CA A G++ H ++++G+D AG+AL+ +Y+KC
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKC 465
Query: 351 GNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVL 410
G + A +VF +P D VSW +LI Q+G A+ +E +LK G +PD+IT + VL
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Query: 411 SACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPD 470
+AC+HAGLVD+G +YF S++ + + ADHYA +IDLL RSG+F++AE++I+++ KP
Sbjct: 526 TACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPT 585
Query: 471 KFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKD 530
+W +LL GCR+HGN+EL AA+ LF + PE+ TY+ L+N++A GQW E A+VRK
Sbjct: 586 AEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKL 645
Query: 531 MEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFV 590
M RG+ K+ SWIE++ QVH FLV DTSHP+ ++ +L +L K+M+ GYVPDT+FV
Sbjct: 646 MRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFV 705
Query: 591 LHDVEEE-QKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQ 649
LHDVE + KE L HSEK+AVAFG++ PPGT I++FKNLRTC DCH ++ S +VQ
Sbjct: 706 LHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQ 765
Query: 650 RKIILRDSNRFHCFEDGSCSCKDYW 674
R IILRD RFH F +G CSC ++W
Sbjct: 766 RDIILRDRKRFHHFRNGECSCGNFW 790
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 221/505 (43%), Gaps = 91/505 (18%)
Query: 65 RPSPRL-------YSTLIAACV--RHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAK 115
+P+P L Y+ + C+ R +L+ R VH + F P I NRL+D+Y K
Sbjct: 2 QPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCK 61
Query: 116 CGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP--RRDHFSWNAAIS 173
L A++LFDE+ + D + TM++GY G + AR +F++ P RD +NA I+
Sbjct: 62 SSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMIT 121
Query: 174 GYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP-----CLRLGKEIHGYLV 228
G+ + A+ +F M KHE + FT +S LA A + C+ + H +
Sbjct: 122 GFSHNNDGYSAINLFCKM-KHEGFKPDNFTFASVLAGLALVADDEKQCV----QFHAAAL 176
Query: 229 RAGLDLDEVVWSALLDLYGKCGS----LDEARGIFDQMVDKDVVSWTTMIHRCFEDGR-- 282
++G V +AL+ +Y KC S L AR +FD++++KD SWTTM+ ++G
Sbjct: 177 KSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFD 236
Query: 283 ------------------------------REEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
+E + R ++ SG+ +E+T+ V++AC
Sbjct: 237 LGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC 296
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
A LGK+VH Y++R D ++LV LY KCG A +F ++P DLVSW
Sbjct: 297 ATAGLLQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWN 355
Query: 373 SL-------------------------------IGGFAQNGQPDRALHFFELLLKSGTKP 401
+L I G A+NG + L F + + G +P
Sbjct: 356 ALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415
Query: 402 DQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
F G + +C G G +Y H+ K G + +I + A+ G EA +
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQY-HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 462 IDNMSIKPDKFLWASLLGGCRIHGN 486
M D W +L+ HG+
Sbjct: 475 FRTMPCL-DSVSWNALIAALGQHGH 498
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/611 (41%), Positives = 387/611 (63%), Gaps = 3/611 (0%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + ++ +C + +A ++G+++H +++ L+ +Y + G L DA ++
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FD+ RD+ S+ +I GYA G++E A+KLFDE+P +D SWNA ISGY G +EAL
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
E+F+ M K + ++ T+ + ++A A + LG+++H ++ G + + +AL+DL
Sbjct: 252 ELFKDMMK-TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 310
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KCG L+ A G+F+++ KDV+SW T+I +E LF++++ SG PN+ T
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 306 TGVLKACADHAAEHLGKEVHGYMMR--VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
+L ACA A +G+ +H Y+ + G S ++L+D+Y+KCG+ + A +VFN I
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
L SW ++I GFA +G+ D + F + K G +PD ITFVG+LSAC+H+G++D G
Sbjct: 431 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR 490
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
F ++ + + + +HY C+IDLL SG F EAE +I+ M ++PD +W SLL C++
Sbjct: 491 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKM 550
Query: 484 HGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
HGN+EL + A L +IEPENP +Y+ L+NIYA+AG+W E AK R + +G+ K PG S
Sbjct: 551 HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
Query: 544 WIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNL 603
IEI VH F++GD HP+ R+I+ L E+ +++ G+VPDT+ VL ++EEE KE L
Sbjct: 611 SIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGAL 670
Query: 604 FYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCF 663
+HSEKLA+AFG+IST PGT + + KNLR C +CH A K SKI +R+II RD RFH F
Sbjct: 671 RHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHF 730
Query: 664 EDGSCSCKDYW 674
DG CSC DYW
Sbjct: 731 RDGVCSCNDYW 741
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 160/361 (44%), Gaps = 40/361 (11%)
Query: 44 INALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ + KEA++L + RP T+++AC + ++E GR+VH F
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ I N L+DLY+KCG L A LF+ + +D+ SWNT+I GY + ++A LF E
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M R N T+ S L A A + + +
Sbjct: 358 MLR--------------------------------SGETPNDVTMLSILPACAHLGAIDI 385
Query: 220 GKEIHGYLVR--AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
G+ IH Y+ + G+ + ++L+D+Y KCG ++ A +F+ ++ K + SW MI
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR-VGYDPG 336
GR + F LF + G++P++ TF G+L AC+ LG+ + M + P
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 505
Query: 337 SFAGSALVDLYSKCGNTK-IASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
++DL G K + PD V W SL+ +G + F E L+
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 565
Query: 396 K 396
K
Sbjct: 566 K 566
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 43/335 (12%)
Query: 223 IHGYLVRAGLDLDEVVWSALLD---LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
IH +++ GL S L++ L L A +F + + +++ W TM
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
L+ ++ G+ PN YTF VLK+CA A G+++HG+++++G D +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 340 GSALVDLYSKCGNTKIASRV-------------------------------FNQIPRPDL 368
++L+ +Y + G + A +V F++IP D+
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
VSW ++I G+A+ G AL F+ ++K+ +PD+ T V V+SAC +G ++ G + H
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VHL 290
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
+ HG +IDL ++ G A + + + K D W +L+GG + ++
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG---YTHMN 346
Query: 489 LAKRAANALFEI----EPENPATYITLANIYANAG 519
L K A E+ E N T +++ A+ G
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 500 bits (1287), Expect = e-141, Method: Compositional matrix adjust.
Identities = 246/626 (39%), Positives = 381/626 (60%), Gaps = 17/626 (2%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP ++ C G+++H +S I +F+ N L+D+YAKCG + +A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISGYVSHGR 180
+F M +D+ SWN M+AGY+++G E A +LF++M + D +W+AAISGY G
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 181 PREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL------ 234
EAL + R M N+ TL S L+ A++ L GKEIH Y ++ +DL
Sbjct: 346 GYEALGVCRQMLS-SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 235 -DEVVWSALLDLYGKCGSLDEARGIFDQMV--DKDVVSWTTMIHRCFEDGRREEGFSLFR 291
+ +V + L+D+Y KC +D AR +FD + ++DVV+WT MI + G + L
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 292 DLM--GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS-FAGSALVDLYS 348
++ RPN +T + L ACA AA +GK++H Y +R + F + L+D+Y+
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524
Query: 349 KCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVG 408
KCG+ A VF+ + + V+WTSL+ G+ +G + AL F+ + + G K D +T +
Sbjct: 525 KCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV 584
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK 468
VL AC+H+G++D+G+EYF+ +K G+ +HYAC++DLL R+GR N A +I+ M ++
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME 644
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVR 528
P +W + L CRIHG +EL + AA + E+ + +Y L+N+YANAG+W + ++R
Sbjct: 645 PPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIR 704
Query: 529 KDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTN 588
M +G+ K+PG SW+E + F VGD +HP ++I++ L + +++K+ GYVP+T
Sbjct: 705 SLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETG 764
Query: 589 FVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIV 648
F LHDV++E+K+ LF HSEKLA+A+GI++TP G I++ KNLR C DCHTA Y S+I+
Sbjct: 765 FALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRII 824
Query: 649 QRKIILRDSNRFHCFEDGSCSCKDYW 674
IILRDS+RFH F++GSCSCK YW
Sbjct: 825 DHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 223/475 (46%), Gaps = 81/475 (17%)
Query: 59 LLHHVD-RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCG 117
L+H + P + + AC ++ G HAL+ + FI +F+ N L+ +Y++C
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 118 SLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVS 177
SL+DA+++FDEM D+ SWN++I YAKL
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKL------------------------------ 206
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
G+P+ ALEMF M + TL + L A++ LGK++H + V + + +
Sbjct: 207 -GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLF------- 290
V + L+D+Y KCG +DEA +F M KDVVSW M+ + GR E+ LF
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 291 ----------------------------RDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
R ++ SG++PNE T VL CA A GK
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 323 EVHGYMMRV-------GYDPGSFAGSALVDLYSKCGNTKIASRVFNQI-PRP-DLVSWTS 373
E+H Y ++ G+ + + L+D+Y+KC A +F+ + P+ D+V+WT
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 374 LIGGFAQNGQPDRALHFFELLLKSG--TKPDQITFVGVLSACTHAGLVDKGLE-YFHSIK 430
+IGG++Q+G ++AL + + T+P+ T L AC + G + + ++++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 431 EKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
+ + C+ID+ A+ G ++A + DNM K ++ W SL+ G +HG
Sbjct: 506 NQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMHG 558
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 203/448 (45%), Gaps = 53/448 (11%)
Query: 115 KCGSLADAQRLFDEMGDRDLCSWNT---MIAGYAKLGWLEQARKLFDEMPRRDH--FSWN 169
KC +++ + + ++ + + N +I+ Y +G L A L P D + WN
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 170 AAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR 229
+ I Y +G + L +F +M + N +T A I +R G+ H +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDN-YTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 230 AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSL 289
G + V +AL+ +Y +C SL +AR +FD+M DVVSW ++I + G+ + +
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 290 FRDLMGS-GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYS 348
F + G RP+ T VL CA LGK++H + + F G+ LVD+Y+
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 349 KCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFE---------------- 392
KCG A+ VF+ + D+VSW +++ G++Q G+ + A+ FE
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 393 -------------------LLLKSGTKPDQITFVGVLSACTHAGLVDKGLE-YFHSIK-- 430
+L SG KP+++T + VLS C G + G E + ++IK
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 431 ---EKHGLMHTADHYAC--VIDLLARSGRFNEAENIIDNMSIKP-DKFLWASLLGGCRIH 484
K+G H ++ +ID+ A+ + + A + D++S K D W ++GG H
Sbjct: 396 IDLRKNG--HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Query: 485 GNIELAKRAANALFEIEPENPATYITLA 512
G+ A + +FE + + T++
Sbjct: 454 GDANKALELLSEMFEEDCQTRPNAFTIS 481
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 358/588 (60%), Gaps = 2/588 (0%)
Query: 87 GRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAK 146
G+++H F + + + LL +YA G ++DA+++F + DR+ +N+++ G
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 147 LGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
G +E A +LF M +D SW A I G +G +EA+E FR M K + +++ S
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGS 275
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
L A + + GK+IH ++R V SAL+D+Y KC L A+ +FD+M K+
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
VVSWT M+ + GR EE +F D+ SG+ P+ YT + ACA+ ++ G + HG
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
+ G ++LV LY KCG+ ++R+FN++ D VSWT+++ +AQ G+
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
+ F+ +++ G KPD +T GV+SAC+ AGLV+KG YF + ++G++ + HY+C+I
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPA 506
DL +RSGR EA I+ M PD W +LL CR GN+E+ K AA +L E++P +PA
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 575
Query: 507 TYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRD 566
Y L++IYA+ G+W A++R+ M + + K+PG+SWI+ K ++H F D S P +
Sbjct: 576 GYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQ 635
Query: 567 IHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIK 626
I+ L EL+ K+ + GY PDT+FV HDVEE K + L YHSE+LA+AFG+I P G PI+
Sbjct: 636 IYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIR 695
Query: 627 VFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
V KNLR CVDCH A K+ S + R+I++RD+ RFH F+DG+CSC D+W
Sbjct: 696 VGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 217/443 (48%), Gaps = 39/443 (8%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFI-----PGIFISNRLLDLYAKCGSLADAQRL 125
YS I C+ A Q R V + N I P F+ N ++ YA S A+R+
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMI--HGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV 63
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FD + +L SWN ++ Y+K G + + F+++P RD +WN I GY G A+
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+ + M + S+N + TL + L +++ + LGK+IHG +++ G + +V S LL +
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 246 YGKCGSLDEARGIFDQMVD------------------------------KDVVSWTTMIH 275
Y G + +A+ +F + D KD VSW MI
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIK 243
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
++G +E FR++ G++ ++Y F VL AC A + GK++H ++R +
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD 303
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+ GSAL+D+Y KC A VF+++ + ++VSWT+++ G+ Q G+ + A+ F +
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+SG PD T +SAC + +++G + FH GL+H ++ L + G
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 456 NEAENIIDNMSIKPDKFLWASLL 478
+++ + + M+++ D W +++
Sbjct: 423 DDSTRLFNEMNVR-DAVSWTAMV 444
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 168/355 (47%), Gaps = 38/355 (10%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRV 90
K + ++ I L Q KEA++ + ++ + +++ AC A+ +G+++
Sbjct: 233 KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI 292
Query: 91 HALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWL 150
HA +NF I++ + L+D+Y KC L A+ +FD M +++ SW M+ GY + G
Sbjct: 293 HACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRA 352
Query: 151 EQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
E+A K+F +M R + + +TL ++A
Sbjct: 353 EEAVKIFLDMQR--------------------------------SGIDPDHYTLGQAISA 380
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSW 270
A + L G + HG + +GL V ++L+ LYGKCG +D++ +F++M +D VSW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 271 TTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM- 329
T M+ + GR E LF ++ G++P+ T TGV+ AC+ G+ M
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 330 RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQ 383
G P S ++DL+S+ G + A R N +P PD + WT+L+ G
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 44/247 (17%)
Query: 49 QQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIF 104
Q R +EAV + + R P I+AC +LE+G + H +S I +
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 105 ISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR- 163
+SN L+ LY KCG + D+ RLF+EM RD SW M++ YA+ G + +LFD+M +
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 164 ---DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLG 220
D + IS G + F++M + +P +
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMT----------------SEYGIVPSI--- 508
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMIHRCFE 279
G+ +S ++DL+ + G L+EA + M D + WTT++ C
Sbjct: 509 ----GH------------YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 280 DGRREEG 286
G E G
Sbjct: 553 KGNLEIG 559
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 35/313 (11%)
Query: 239 WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV 298
W+ LL Y K G + E F+++ D+D V+W +I EG+SL L+G+ V
Sbjct: 75 WNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLI----------EGYSL-SGLVGAAV 123
Query: 299 RP------------NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
+ T +LK + + LGK++HG ++++G++ GS L+ +
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y+ G A +VF + + V + SL+GG G + AL F G + D +++
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSW 238
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI---ID 463
++ GL + +E F +K + GL + V+ G NE + I I
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 464 NMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAE 523
+ + ++ ++L+ ++ + A ++ +N ++ + Y G+ E
Sbjct: 298 RTNFQDHIYVGSALI---DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 524 EAKVRKDMEIRGI 536
K+ DM+ GI
Sbjct: 355 AVKIFLDMQRSGI 367
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/611 (40%), Positives = 364/611 (59%), Gaps = 33/611 (5%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+PS +S ++ A V G+++HAL+ ++ F + N++LD Y+K
Sbjct: 247 QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK--------- 297
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
DR L + R LFDEMP D S+N IS Y + +
Sbjct: 298 -----HDRVL-----------------ETRMLFDEMPELDFVSYNVVISSYSQADQYEAS 335
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L FR MQ N F ++ L+ AA + L++G+++H + A D V ++L+D
Sbjct: 336 LHFFREMQCMGFDRRN-FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y KC +EA IF + + VSWT +I + G G LF + GS +R ++ T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
F VLKA A A+ LGK++H +++R G F+GS LVD+Y+KCG+ K A +VF ++P
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
+ VSW +LI A NG + A+ F +++SG +PD ++ +GVL+AC+H G V++G E
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
YF ++ +G+ HYAC++DLL R+GRF EAE ++D M +PD+ +W+S+L CRIH
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 485 GNIELAKRAANALFEIEP-ENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
N LA+RAA LF +E + A Y++++NIYA AG+W + V+K M RGI K P S
Sbjct: 635 KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Query: 544 WIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNL 603
W+E+ ++HVF D +HP +I + EL+ +++ EGY PDT+ V+ DV+E+ K ++L
Sbjct: 695 WVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESL 754
Query: 604 FYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCF 663
YHSE+LAVAF +ISTP G PI V KNLR C DCH A+K SKIV+R+I +RD++RFH F
Sbjct: 755 KYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHF 814
Query: 664 EDGSCSCKDYW 674
+G CSC DYW
Sbjct: 815 SEGVCSCGDYW 825
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 197/401 (49%), Gaps = 15/401 (3%)
Query: 88 RRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKL 147
RRV A + F SN +++ + G ++ A++++DEM ++ S NTMI+G+ K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 148 GWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSN-SNKFTLSS 206
G + AR LFD MP R +W + Y + EA ++FR M + S + T ++
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 207 GLAAAA-AIPCLRLGKEIHGYLVRAGLDLDE--VVWSALLDLYGKCGSLDEARGIFDQMV 263
L A+P +G ++H + V+ G D + V + LL Y + LD A +F+++
Sbjct: 153 LLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 264 DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE 323
+KD V++ T+I +DG E LF + SG +P+++TF+GVLKA LG++
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 324 VHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ 383
+H + G+ + G+ ++D YSK +F+++P D VS+ +I ++Q Q
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
+ +LHFF + G F +LS + + G + H L+ TAD
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ-LHC----QALLATADSIL 386
Query: 444 CV----IDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
V +D+ A+ F EAE I ++ + W +L+ G
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALISG 426
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/647 (38%), Positives = 373/647 (57%), Gaps = 40/647 (6%)
Query: 34 AKTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHAL 93
AK +NN + I +LC++ +LK+A+ +L PS + Y LI C +L RVH
Sbjct: 45 AKISNN--QLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVH-- 100
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQA 153
+ + D D+D +I Y+ LG ++ A
Sbjct: 101 -----------------------------RHILDNGSDQDPFLATKLIGMYSDLGSVDYA 131
Query: 154 RKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAA 213
RK+FD+ +R + WNA G E L ++ M + S++FT + L A A
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR-IGVESDRFTYTYVLKACVA 190
Query: 214 IPC----LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS 269
C L GKEIH +L R G + + L+D+Y + G +D A +F M ++VVS
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 270 WTTMIHRCFEDGRREEGFSLFRDLM--GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
W+ MI ++G+ E FR++M PN T VL+ACA AA GK +HGY
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRA 387
++R G D SALV +Y +CG ++ RVF+++ D+VSW SLI + +G +A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 388 LHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 447
+ FE +L +G P +TFV VL AC+H GLV++G F ++ HG+ +HYAC++D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 448 LLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPAT 507
LL R+ R +EA ++ +M +P +W SLLG CRIHGN+ELA+RA+ LF +EP+N
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGN 490
Query: 508 YITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDI 567
Y+ LA+IYA A W E +V+K +E RG+ K PG+ W+E++R+++ F+ D +P + I
Sbjct: 491 YVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQI 550
Query: 568 HEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKV 627
H FL +L++ MKE+GY+P T VL+++E E+KE+ + HSEKLA+AFG+I+T G PI++
Sbjct: 551 HAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRI 610
Query: 628 FKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
KNLR C DCH K+ SK ++++I++RD NRFH F++G CSC DYW
Sbjct: 611 TKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/653 (37%), Positives = 381/653 (58%), Gaps = 48/653 (7%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALT 94
+ +++LCQ ++L EA++ L + P S+++ AC L G+ +HA
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 95 -KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQA 153
K+ + F+ + L+D+Y C + +R+FD M DR K+G
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR-------------KIGL---- 371
Query: 154 RKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAA 213
WNA I+GY + +EAL +F M++ +N T++ + A
Sbjct: 372 --------------WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 214 IPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTM 273
+ IHG++V+ GLD D V + L+D+Y + G +D A IF +M D+D+V+W TM
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 274 IHRCFEDGRREEGFSLFRDLMG-----------SGVRPNEYTFTGVLKACADHAAEHLGK 322
I E+ L + ++PN T +L +CA +A GK
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNG 382
E+H Y ++ GSALVD+Y+KCG +++ +VF+QIP+ ++++W +I + +G
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 597
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
A+ +++ G KP+++TF+ V +AC+H+G+VD+GL F+ +K +G+ ++DHY
Sbjct: 598 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 657
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKF-LWASLLGGCRIHGNIELAKRAANALFEIE 501
ACV+DLL R+GR EA +++ M +K W+SLLG RIH N+E+ + AA L ++E
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 717
Query: 502 PENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSH 561
P + Y+ LANIY++AG W + +VR++M+ +G+ K+PG SWIE +VH F+ GD+SH
Sbjct: 718 PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH 777
Query: 562 PKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPP 621
P+ + +L L ++M++EGYVPDT+ VLH+VEE++KE L HSEKLA+AFGI++T P
Sbjct: 778 PQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP 837
Query: 622 GTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
GT I+V KNLR C DCH A K+ SKIV R+IILRD RFH F++G+CSC DYW
Sbjct: 838 GTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 206/440 (46%), Gaps = 49/440 (11%)
Query: 53 LKEAVDLLHHVD------RPSPRLYSTLIAACVRHRALEQGRRVHA-LTKSSNFIPGIFI 105
L+EAV L +VD +P + L+ A + +E G+++HA + K + + +
Sbjct: 78 LREAV--LTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTV 135
Query: 106 SNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDH 165
+N L++LY KCG K+FD + R+
Sbjct: 136 ANTLVNLYRKCGDFG-------------------------------AVYKVFDRISERNQ 164
Query: 166 FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC---LRLGKE 222
SWN+ IS S + ALE FR M E+ + FTL S + A + +P L +GK+
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLD-ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ 223
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
+H Y +R G +L+ + + L+ +YGK G L ++ + +D+V+W T++ ++ +
Sbjct: 224 VHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG-YDPGSFAGS 341
E R+++ GV P+E+T + VL AC+ GKE+H Y ++ G D SF GS
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 342 ALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS-GTK 400
ALVD+Y C RVF+ + + W ++I G++QN AL F + +S G
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 401 PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAEN 460
+ T GV+ AC +G + E H K GL ++D+ +R G+ + A
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRK-EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 461 IIDNMSIKPDKFLWASLLGG 480
I M + D W +++ G
Sbjct: 462 IFGKMEDR-DLVTWNTMITG 480
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 270 WTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM 329
W ++ E + D++ G++P+ Y F +LKA AD LGK++H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 330 RVGYDPGSF-AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
+ GY S + LV+LY KCG+ +VF++I + VSW SLI + + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTH 415
F +L +P T V V++AC++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSN 211
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 376/670 (56%), Gaps = 69/670 (10%)
Query: 74 LIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRD 133
++A V+ +L G++VH + + +SN L+++Y K A+ +FD M +RD
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380
Query: 134 LCSWNTMIAGYAKLGWLEQARKLFDEMPR------------------------------- 162
L SWN++IAG A+ G +A LF ++ R
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH 440
Query: 163 ---------RDHFSWNAAISGYVSHGRPREALEMFR-----------MMQKHESSN---- 198
D F A I Y + +EA +F MM + S+
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHK 500
Query: 199 --------------SNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
S+ FTL++ + + GK++H Y +++G DLD V S +LD
Sbjct: 501 TLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILD 560
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y KCG + A+ FD + D V+WTTMI C E+G E F +F + GV P+E+T
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
+ KA + A G+++H +++ F G++LVD+Y+KCG+ A +F +I
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
++ +W +++ G AQ+G+ L F+ + G KPD++TF+GVLSAC+H+GLV + +
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYK 740
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
+ S+ +G+ +HY+C+ D L R+G +AEN+I++MS++ ++ +LL CR+
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQ 800
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
G+ E KR A L E+EP + + Y+ L+N+YA A +W E R M+ + K PG SW
Sbjct: 801 GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860
Query: 545 IEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLF 604
IE+K ++H+F+V D S+ + I+ + ++ + +K+EGYVP+T+F L DVEEE+KE+ L+
Sbjct: 861 IEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALY 920
Query: 605 YHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFE 664
YHSEKLAVAFG++STPP TPI+V KNLR C DCH AMKY +K+ R+I+LRD+NRFH F+
Sbjct: 921 YHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFK 980
Query: 665 DGSCSCKDYW 674
DG CSC DYW
Sbjct: 981 DGICSCGDYW 990
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 241/558 (43%), Gaps = 95/558 (17%)
Query: 104 FISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM--- 160
F++ L+++Y K G + + + LF+EM RD+ WN M+ Y ++G+ E+A L
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 161 ---PRRDHFSWNAAISG--------------------------------YVSHGRPREAL 185
P A ISG Y+ G+ L
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALL 300
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+ F M + + ++ T LA A + L LG+++H ++ GLDL V ++L+++
Sbjct: 301 KCFADMVESDV-ECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y K AR +FD M ++D++SW ++I ++G E LF L+ G++P++YT
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 306 TGVLKACAD-HAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
T VLKA + L K+VH + +++ SF +AL+D YS+ K A +F +
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-H 478
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
DLV+W +++ G+ Q+ + L F L+ K G + D T V C +++G +
Sbjct: 479 NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG-K 537
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
H+ K G + ++D+ + G + A+ D++ + PD W +++ GC +
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIEN 596
Query: 485 GNIE-----------------------LAKRA-------------ANALFEIEPENPATY 508
G E LAK + ANAL +P
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 509 ITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIH 568
+L ++YA G + + K +E+ I +W + LVG H + ++
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNIT-----AW-------NAMLVGLAQHGEGKETL 704
Query: 569 EFLGELSKKMKEEGYVPD 586
+L K+MK G PD
Sbjct: 705 ----QLFKQMKSLGIKPD 718
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 163/365 (44%), Gaps = 42/365 (11%)
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGR----- 180
F+E +R L N +I+ Y+K G L AR++FD+MP RD SWN+ ++ Y
Sbjct: 68 FEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 181 PREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWS 240
++A +FR++ + + +++ TLS L + + HGY + GLD DE V
Sbjct: 126 IQQAFLLFRIL-RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 241 ALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRP 300
AL+++Y K G + E + +F++M +DVV W M+ E G +EE L SG+ P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVF 360
NE T + + D + D G A N AS V
Sbjct: 245 NEITLRLLARISGDDS-----------------DAGQVKSFA---------NGNDASSVS 278
Query: 361 NQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD 420
I R +S + +GQ L F +++S + DQ+TF+ +L+ +
Sbjct: 279 EIIFRNKGLS------EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 421 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
G + H + K GL +I++ + +F A + DNMS + D W S++ G
Sbjct: 333 LG-QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS-ERDLISWNSVIAG 390
Query: 481 CRIHG 485
+G
Sbjct: 391 IAQNG 395
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 41/305 (13%)
Query: 64 DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQ 123
+R +T+ C A+ QG++VHA S + +++S+ +LD+Y KCG ++ AQ
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
FD + D +W TMI+G + G E+A +F +M
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM----------------------- 609
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
R+M ++FT+++ A++ + L G++IH ++ D V ++L+
Sbjct: 610 -----RLM----GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
D+Y KCGS+D+A +F ++ ++ +W M+ + G +E LF+ + G++P++
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 304 TFTGVLKACA-----DHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR 358
TF GVL AC+ A +H+ + +HG G P S L D + G K A
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHM-RSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAEN 776
Query: 359 VFNQI 363
+ +
Sbjct: 777 LIESM 781
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI-- 274
L LGK H ++ + + + + L+ +Y KCGSL AR +FD+M D+D+VSW +++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 275 ----HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR 330
C + ++ F LFR L V + T + +LK C + HGY +
Sbjct: 115 YAQSSECVVENI-QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 331 VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHF 390
+G D F ALV++Y K G K +F ++P D+V W ++ + + G + A+
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 391 FELLLKSGTKPDQITF 406
SG P++IT
Sbjct: 234 SSAFHSSGLNPNEITL 249
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/599 (40%), Positives = 367/599 (61%), Gaps = 33/599 (5%)
Query: 69 RLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDE 128
R Y+TL+ C + L QGR VHA S F I + N LL++Y
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMY--------------- 105
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
AK G LE+ARK+F++MP+RD +W ISGY H RP +AL F
Sbjct: 106 ----------------AKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFF 149
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
M + S N+FTLSS + AAAA G ++HG+ V+ G D + V SALLDLY +
Sbjct: 150 NQMLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
G +D+A+ +FD + ++ VSW +I E+ LF+ ++ G RP+ +++ +
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
AC+ GK VH YM++ G +FAG+ L+D+Y+K G+ A ++F+++ + D+
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
VSW SL+ +AQ+G A+ +FE + + G +P++I+F+ VL+AC+H+GL+D+G Y+
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
+K K G++ A HY V+DLL R+G N A I+ M I+P +W +LL CR+H N E
Sbjct: 389 MK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Query: 489 LAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIK 548
L AA +FE++P++P ++ L NIYA+ G+W + A+VRK M+ G+ K+P SW+EI+
Sbjct: 448 LGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIE 507
Query: 549 RQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSE 608
+H+F+ D HP+ +I E+ K+KE GYVPDT+ V+ V+++++E NL YHSE
Sbjct: 508 NAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSE 567
Query: 609 KLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGS 667
K+A+AF +++TPPG+ I + KN+R C DCHTA+K SK+V R+II+RD+NRFH F+D S
Sbjct: 568 KIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 164/359 (45%), Gaps = 41/359 (11%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ Q R +A+ + + R P+ S++I A R G ++H F
Sbjct: 133 ISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGF 192
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ + + LLDLY + G + DAQ +FD + R+ SWN +IAG+A+ E+A +LF
Sbjct: 193 DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQG 252
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M RD F RP + F+ +S A ++ L
Sbjct: 253 M-LRDGF-------------RP------------------SHFSYASLFGACSSTGFLEQ 280
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
GK +H Y++++G L + LLD+Y K GS+ +AR IFD++ +DVVSW +++ +
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
G +E F ++ G+RPNE +F VL AC+ G + M + G P ++
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 340 GSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPD----RALHFFEL 393
+VDL + G+ A R ++P P W +L+ + + A H FEL
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFEL 459
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 147/356 (41%), Gaps = 67/356 (18%)
Query: 292 DLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCG 351
DL GS + + + +LK C G+ VH ++++ + G+ L+++Y+KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 352 NTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLS 411
+ + A +VF ++P+ D V+WT+LI G++Q+ +P AL FF +L+ G P++ T V+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 412 ACTHAGLVDKGL--EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS--- 466
A A +G H K G + ++DL R G ++A+ + D +
Sbjct: 170 A---AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN 226
Query: 467 -------------------------------IKPDKFLWASLLGGCRIHGNIELAKRAAN 495
+P F +ASL G C G +E K +
Sbjct: 227 DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK-WVH 285
Query: 496 ALFEIEPENPATYI--TLANIYANAGQWAEEAKVRKDMEIRGIVK--------------K 539
A E + TL ++YA +G + K+ + R +V K
Sbjct: 286 AYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGK 345
Query: 540 PGKSWIEIKRQVHV------FL--VGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
W E R+V + FL + SH + D EL MK++G VP+
Sbjct: 346 EAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL---MKKDGIVPEA 398
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/628 (38%), Positives = 378/628 (60%), Gaps = 18/628 (2%)
Query: 62 HVDRPSPRLYSTLIAACVRH-------RALEQGRRVHALTKSSNFIPGIFISNRLLDLYA 114
+VD+ ++++IA R A R++ S+F I + L D+++
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 115 KCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISG 174
Q+ F D+ + +I Y+ G LE ARK+FDE+P+R+ SW + I G
Sbjct: 95 ---GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 175 YVSHGRPREALEMFRMMQKHESSNSNKFTLSSG-----LAAAAAIPCLRLGKEIHGYLVR 229
Y +G +A+ +F+ + E+ + + L S ++A + +P L + IH ++++
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 230 AGLDLDEVVWSALLDLYGKCG--SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGF 287
G D V + LLD Y K G + AR IFDQ+VDKD VS+ +++ + G E F
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 288 SLFRDLMGSGVRP-NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
+FR L+ + V N T + VL A + A +GK +H ++R+G + G++++D+
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y KCG + A + F+++ ++ SWT++I G+ +G +AL F ++ SG +P+ ITF
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
V VL+AC+HAGL +G +F+++K + G+ +HY C++DLL R+G +A ++I M
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAK 526
+KPD +W+SLL CRIH N+ELA+ + LFE++ N Y+ L++IYA+AG+W + +
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 527 VRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPD 586
VR M+ RG+VK PG S +E+ +VHVFL+GD HP+ I+EFL EL++K+ E GYV +
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Query: 587 TNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSK 646
T+ V HDV+EE+KE L HSEKLA+AFGI++T PG+ + V KNLR C DCH +K SK
Sbjct: 572 TSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISK 631
Query: 647 IVQRKIILRDSNRFHCFEDGSCSCKDYW 674
IV R+ ++RD+ RFH F+DG CSC DYW
Sbjct: 632 IVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 13/231 (5%)
Query: 258 IFDQMVDK-DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+F++ VDK DV SW ++I G E F + + P +F +KAC+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
GK+ H GY F SAL+ +YS CG + A +VF++IP+ ++VSWTS+I
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITF------VGVLSACTHAGLVDKGL-EYFHSI 429
G+ NG A+ F+ LL D F V V+SAC+ + KGL E HS
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR--VPAKGLTESIHSF 208
Query: 430 KEKHGLMHTADHYACVIDLLARSGR--FNEAENIIDNMSIKPDKFLWASLL 478
K G ++D A+ G A I D + + D+ + S++
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSIM 258
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/637 (38%), Positives = 364/637 (57%), Gaps = 41/637 (6%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ LC RL+EA L + P + Y L+ AC+ RAL G+RVHA + +
Sbjct: 27 ISQLCSNGRLQEA---LLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+P ++ RLL Y KC L DA+++ DEM ++++ SW MI+ Y++ G +A +F E
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M R D G+P N+FT ++ L + L L
Sbjct: 144 MMRSD--------------GKP------------------NEFTFATVLTSCIRASGLGL 171
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
GK+IHG +V+ D V S+LLD+Y K G + EAR IF+ + ++DVVS T +I +
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
G EE +F L G+ PN T+ +L A + A GK+ H +++R +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL-KSG 398
++L+D+YSKCGN A R+F+ +P +SW +++ G++++G L F L+ +
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHS-IKEKHGLMHTADHYACVIDLLARSGRFNE 457
KPD +T + VLS C+H + D GL F + ++G +HY C++D+L R+GR +E
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 458 AENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYAN 517
A I M KP + SLLG CR+H ++++ + L EIEPEN Y+ L+N+YA+
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 518 AGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKK 577
AG+WA+ VR M + + K+PG+SWI+ ++ +H F D +HP+ ++ + E+S K
Sbjct: 472 AGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIK 531
Query: 578 MKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDC 637
MK+ GYVPD + VL+DV+EEQKE+ L HSEKLA+ FG+I+T G PI+VFKNLR CVDC
Sbjct: 532 MKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDC 591
Query: 638 HTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
H K SK+ +R++ LRD NRFH DG CSC DYW
Sbjct: 592 HNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/603 (39%), Positives = 360/603 (59%), Gaps = 33/603 (5%)
Query: 73 TLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR 132
++ A C R + GR VH++ + F N LLD+Y+KC
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC---------------- 344
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
G L+ A+ +F EM R S+ + I+GY G EA+++F M+
Sbjct: 345 ---------------GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
+ E + + +T+++ L A L GK +H ++ L D V +AL+D+Y KCGS+
Sbjct: 390 E-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKA 311
EA +F +M KD++SW T+I ++ E SLF L+ P+E T VL A
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 312 CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSW 371
CA +A G+E+HGY+MR GY ++LVD+Y+KCG +A +F+ I DLVSW
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 372 TSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKE 431
T +I G+ +G A+ F + ++G + D+I+FV +L AC+H+GLVD+G +F+ ++
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 432 KHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAK 491
+ + T +HYAC++D+LAR+G +A I+NM I PD +W +LL GCRIH +++LA+
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 492 RAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQV 551
+ A +FE+EPEN Y+ +ANIYA A +W + ++RK + RG+ K PG SWIEIK +V
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Query: 552 HVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLA 611
++F+ GD+S+P+ +I FL ++ +M EEGY P T + L D EE +KE+ L HSEKLA
Sbjct: 749 NIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLA 808
Query: 612 VAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCK 671
+A GIIS+ G I+V KNLR C DCH K+ SK+ +R+I+LRDSNRFH F+DG CSC+
Sbjct: 809 MALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCR 868
Query: 672 DYW 674
+W
Sbjct: 869 GFW 871
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 189/351 (53%), Gaps = 8/351 (2%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N+++A Y K ++ ARK+FDEM RD SWN+ I+GYVS+G + L +F M
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV-SGI 292
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
+ T+ S A A + LG+ +H V+A ++ + LLD+Y KCG LD A+
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+F +M D+ VVS+T+MI +G E LF ++ G+ P+ YT T VL CA +
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 318 EHLGKEVHGYMMR--VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
GK VH ++ +G+D F +AL+D+Y+KCG+ + A VF+++ D++SW ++I
Sbjct: 413 LDEGKRVHEWIKENDLGFDI--FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 470
Query: 376 GGFAQNGQPDRALHFFELLLKSGT-KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
GG+++N + AL F LLL+ PD+ T VL AC DKG E H ++G
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE-IHGYIMRNG 529
Query: 435 LMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
++D+ A+ G A + D+++ K D W ++ G +HG
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 203/436 (46%), Gaps = 36/436 (8%)
Query: 47 LCQQKRLKEAVDLLHHVDR--PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIF 104
C+ L+ AV LL + PR +++ C ++L+ G+ V + + F+
Sbjct: 71 FCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSN 130
Query: 105 ISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRD 164
+ ++L +Y CG L +A R+ FDE+
Sbjct: 131 LGSKLSLMYTNCGDLKEASRV-------------------------------FDEVKIEK 159
Query: 165 HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
WN ++ G ++ +F+ M + +T S + +++ + G+++H
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 225 GYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRRE 284
G+++++G V ++L+ Y K +D AR +FD+M ++DV+SW ++I+ +G E
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 285 EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV 344
+G S+F ++ SG+ + T V CAD LG+ VH ++ + + L+
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 345 DLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
D+YSKCG+ A VF ++ +VS+TS+I G+A+ G A+ FE + + G PD
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 405 TFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDN 464
T VL+ C L+D+G IKE + L ++D+ A+ G EAE +
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKE-NDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 465 MSIKPDKFLWASLLGG 480
M +K D W +++GG
Sbjct: 458 MRVK-DIISWNTIIGG 472
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 37/329 (11%)
Query: 55 EAVDLLHHVDRP--SPRLYST--LIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
EAV L ++ SP +Y+ ++ C R+R L++G+RVH K ++ IF+SN L+
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNA 170
D+YAKC G +++A +F EM +D SWN
Sbjct: 440 DMYAKC-------------------------------GSMQEAELVFSEMRVKDIISWNT 468
Query: 171 AISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA 230
I GY + EAL +F ++ + + + ++ T++ L A A++ G+EIHGY++R
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 231 GLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLF 290
G D V ++L+D+Y KCG+L A +FD + KD+VSWT MI G +E +LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 291 RDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSK 349
+ +G+ +E +F +L AC+ G M +P + +VD+ ++
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 350 CGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
G+ A R +P PD W +L+ G
Sbjct: 649 TGDLIKAYRFIENMPIPPDATIWGALLCG 677
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 203 TLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM 262
TL S L A L+ GKE+ ++ G +D + S L +Y CG L EA +FD++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 263 VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
+ + W +++ + G LF+ +M SGV + YTF+ V K+ + + H G+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNG 382
++HG++++ G+ + G++LV Y K A +VF+++ D++SW S+I G+ NG
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
++ L F +L SG + D T V V + C + L+ G HSI K
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-RAVHSIGVKACFSREDRFC 334
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP 502
++D+ ++ G + A+ + MS + + S++ G G LA A E+E
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAGYAREG---LAGEAVKLFEEMEE 390
Query: 503 E--NPATYITLA 512
E +P Y A
Sbjct: 391 EGISPDVYTVTA 402
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/660 (35%), Positives = 380/660 (57%), Gaps = 47/660 (7%)
Query: 51 KRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF-IPGIFISNRL 109
+R+ EA ++ + V P LY+ +I R R V AL + + N +
Sbjct: 49 RRIDEAREVFNQVPSPHVSLYTKMITGYTR-----SNRLVDALNLFDEMPVRDVVSWNSM 103
Query: 110 LDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWN 169
+ +CG + A +LFDEM +R + SW M+ G + G ++QA +LF +MP +D +WN
Sbjct: 104 ISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN 163
Query: 170 AAISGYVSHGRPREALEMFRMM----------------QKHES----------------S 197
+ + GY+ G+ +AL++F+ M Q S S
Sbjct: 164 SMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKS 223
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
S FT + A A P +G ++HG +++ G +E V ++L+ Y C + ++R
Sbjct: 224 TSRPFTCV--ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRK 281
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+FD+ V + V WT ++ + + E+ S+F ++ + + PN+ TF L +C+
Sbjct: 282 VFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGT 341
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
GKE+HG +++G + +F G++LV +YS GN A VF +I + +VSW S+I G
Sbjct: 342 LDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVG 401
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
AQ+G+ A F +++ +PD+ITF G+LSAC+H G ++KG + F+ + G+ H
Sbjct: 402 CAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS--GINH 459
Query: 438 T---ADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAA 494
HY C++D+L R G+ EAE +I+ M +KP++ +W +LL CR+H +++ ++AA
Sbjct: 460 IDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAA 519
Query: 495 NALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVF 554
A+F ++ ++ A Y+ L+NIYA+AG+W+ +K+R M+ GI+KKPG SW+ I+ + H F
Sbjct: 520 AAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEF 579
Query: 555 LVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAF 614
GD P I+E L L +K+KE GY PD LHDVE+EQKE+ L+YHSE+LA+AF
Sbjct: 580 FSGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAF 637
Query: 615 GIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
G+I+T G+ + V KNLR C DCHT +K S +V R+I+LRD RFH F++G+CSC DYW
Sbjct: 638 GLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 337/562 (59%), Gaps = 42/562 (7%)
Query: 115 KCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISG 174
K G + +A+ +FDEM +R + +W TM+ GY + ++ ARK+FD MP + SW + + G
Sbjct: 184 KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMG 243
Query: 175 YVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL 234
YV +GR +A E+F +M I C
Sbjct: 244 YVQNGRIEDAEELFEVM-----------------PVKPVIAC------------------ 268
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM 294
+A++ G+ G + +AR +FD M +++ SW T+I +G E LF +
Sbjct: 269 -----NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQ 323
Query: 295 GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK 354
GVRP T +L CA A+ H GK+VH ++R +D + S L+ +Y KCG
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383
Query: 355 IASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSAC 413
+ +F++ P D++ W S+I G+A +G + AL F E+ L TKP+++TFV LSAC
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
Query: 414 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL 473
++AG+V++GL+ + S++ G+ HYAC++D+L R+GRFNEA +ID+M+++PD +
Sbjct: 444 SYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAV 503
Query: 474 WASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEI 533
W SLLG CR H +++A+ A L EIEPEN TYI L+N+YA+ G+WA+ A++RK M+
Sbjct: 504 WGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKT 563
Query: 534 RGIVKKPGKSWIEIKRQVHVFLVGD-TSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLH 592
R + K PG SW E++ +VH F G SHP+ I + L EL ++E GY PD ++ LH
Sbjct: 564 RLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALH 623
Query: 593 DVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKI 652
DV+EE+K +L YHSE+LAVA+ ++ G PI+V KNLR C DCHTA+K SK+ +R+I
Sbjct: 624 DVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREI 683
Query: 653 ILRDSNRFHCFEDGSCSCKDYW 674
ILRD+NRFH F +G CSCKDYW
Sbjct: 684 ILRDANRFHHFRNGECSCKDYW 705
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 174/347 (50%), Gaps = 8/347 (2%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGI 103
I+ LC++ R+ EA ++ + S ++T++ ++ ++ R++ + +
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSW- 237
Query: 104 FISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR 163
+L Y + G + DA+ LF+ M + + + N MI+G + G + +AR++FD M R
Sbjct: 238 ---TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER 294
Query: 164 DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEI 223
+ SW I + +G EAL++F +MQK + TL S L+ A++ L GK++
Sbjct: 295 NDASWQTVIKIHERNGFELEALDLFILMQK-QGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRR 283
H LVR D+D V S L+ +Y KCG L +++ IFD+ KD++ W ++I G
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 284 EEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGS 341
EE +F ++ SG +PNE TF L AC+ G +++ M V G P + +
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 342 ALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRA 387
+VD+ + G A + + + PD W SL+G + Q D A
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 220/481 (45%), Gaps = 46/481 (9%)
Query: 69 RLYSTLI---AACVRHRALEQGRRVHALTKSSNFIPGIFIS--NRLLDLYAKCGSLADAQ 123
R YST I A VR L + ++H K + IS N ++ Y DA+
Sbjct: 9 RTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDAR 68
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
+LFDEM DR++ SWN +++GY K G +++ARK+FD MP R+ SW A + GYV +G+
Sbjct: 69 KLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDV 128
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGK-EIHGYLVRAGLDLDEVVWSAL 242
A +F M + NK + + L I L+ G+ + L D D + +++
Sbjct: 129 AESLFWKMPE-----KNKVSWTVML-----IGFLQDGRIDDACKLYEMIPDKDNIARTSM 178
Query: 243 LDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
+ K G +DEAR IFD+M ++ V++WTTM+ ++ R ++ +F D+M E
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF-DVMP---EKTE 234
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
++T +L + +E+ M P A +A++ + G A RVF+
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVM---PVKP-VIACNAMISGLGQKGEIAKARRVFDS 290
Query: 363 IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
+ + SW ++I +NG AL F L+ K G +P T + +LS C
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCA-------S 343
Query: 423 LEYFHSIKEKHGLM----HTADHY--ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWAS 476
L H K+ H + D Y + ++ + + G +++ I D K D +W S
Sbjct: 344 LASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNS 402
Query: 477 LLGGCRIHGNIELAKRAANALFEI-----EPENPATYITLANIYANAGQWAEEAKVRKDM 531
++ G HG L + A E+ N T++ + + AG E K+ + M
Sbjct: 403 IISGYASHG---LGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 532 E 532
E
Sbjct: 460 E 460
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/632 (37%), Positives = 368/632 (58%), Gaps = 41/632 (6%)
Query: 47 LCQQKRLKEAV----DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPG 102
LC Q+ L A+ L H YS LI C+ +RA+ +G + + P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 103 IFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPR 162
+F+ N L+++Y K F+ + D A +LFD+MP+
Sbjct: 96 MFLVNVLINMYVK----------FNLLND---------------------AHQLFDQMPQ 124
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
R+ SW IS Y ++ALE+ +M + ++ N +T SS L + + +R+
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCNGMSDVRM--- 180
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
+H +++ GL+ D V SAL+D++ K G ++A +FD+MV D + W ++I ++ R
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSA 342
+ LF+ + +G + T T VL+AC A LG + H ++ V YD +A
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNA 298
Query: 343 LVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
LVD+Y KCG+ + A RVFNQ+ D+++W+++I G AQNG AL FE + SGTKP+
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
IT VGVL AC+HAGL++ G YF S+K+ +G+ +HY C+IDLL ++G+ ++A ++
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 463 DNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWA 522
+ M +PD W +LLG CR+ N+ LA+ AA + ++PE+ TY L+NIYAN+ +W
Sbjct: 419 NEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 478
Query: 523 EEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEG 582
++R M RGI K+PG SWIE+ +Q+H F++GD SHP+I ++ + L +L ++ G
Sbjct: 479 SVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIG 538
Query: 583 YVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMK 642
YVP+TNFVL D+E EQ E +L +HSEKLA+AFG+++ P I++ KNLR C DCH K
Sbjct: 539 YVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCK 598
Query: 643 YTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
SK+ R I++RD R+H F+DG CSC DYW
Sbjct: 599 LASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 48/244 (19%)
Query: 44 INALCQQKRLKEAVDLLHHVDRP----SPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I Q R A++L + R ++++ AC LE G + H +
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH--VHIVKY 289
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ ++N L+D+Y KCGSL DA R+F++M +RD+ +W+TMI+G A+ G+ ++A KLF+
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M K + N T+ L A + L
Sbjct: 350 M--------------------------------KSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 220 GKEIHGYLVRA-----GLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTM 273
G Y R+ G+D + ++DL GK G LD+A + ++M + D V+W T+
Sbjct: 378 G----WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 433
Query: 274 IHRC 277
+ C
Sbjct: 434 LGAC 437
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/605 (40%), Positives = 365/605 (60%), Gaps = 15/605 (2%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
+ +IA CVR ++ RV ++ N I ++ L+ + + +A +LFDE+ +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITW---NSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF-RM 190
D S+N M++ Y + E+A+ FD MP +D SWN I+GY G +A E+F M
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M+K+E +S + I C L K H + V + V W+A++ Y K
Sbjct: 182 MEKNE--------VSWNAMISGYIECGDLEKASHFFKVAPVRGV--VAWTAMITGYMKAK 231
Query: 251 SLDEARGIF-DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
++ A +F D V+K++V+W MI E+ R E+G LFR ++ G+RPN + L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
C++ +A LG+++H + + A ++L+ +Y KCG A ++F + + D+V
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
+W ++I G+AQ+G D+AL F ++ + +PD ITFV VL AC HAGLV+ G+ YF S+
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
+ + DHY C++DLL R+G+ EA +I +M +P ++ +LLG CR+H N+EL
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVEL 471
Query: 490 AKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKR 549
A+ AA L ++ +N A Y+ LANIYA+ +W + A+VRK M+ +VK PG SWIEI+
Sbjct: 472 AEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRN 531
Query: 550 QVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEK 609
+VH F D HP++ IH+ L EL KKMK GY P+ F LH+VEEEQKE+ L +HSEK
Sbjct: 532 KVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEK 591
Query: 610 LAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCS 669
LAVAFG I P G+ I+VFKNLR C DCH A+K+ S+I +R+II+RD+ RFH F+DGSCS
Sbjct: 592 LAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCS 651
Query: 670 CKDYW 674
C DYW
Sbjct: 652 CGDYW 656
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP+ S+ + C AL+ GR++H + S + L+ +Y KCG L DA +
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM 160
LF+ M +D+ +WN MI+GYA+ G ++A LF EM
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/566 (39%), Positives = 346/566 (61%), Gaps = 2/566 (0%)
Query: 110 LDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWN 169
+ +Y+K G A ++ M ++ S N +I GY + G L ARK+FDEMP R +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 170 AAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR 229
A I+G + E L +FR M S +++TL S + +A + + +G++IHGY ++
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFS-PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 230 AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSL 289
GL+LD VV S+L +Y + G L + + M +++V+W T+I ++G E L
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 290 FRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSK 349
++ + SG RPN+ TF VL +C+D A G+++H +++G S+L+ +YSK
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 350 CGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL-KSGTKPDQITFVG 408
CG A++ F++ D V W+S+I + +GQ D A+ F + ++ + +++ F+
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK 468
+L AC+H+GL DKGLE F + EK+G HY CV+DLL R+G ++AE II +M IK
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVR 528
D +W +LL C IH N E+A+R + +I+P + A Y+ LAN++A+A +W + ++VR
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVR 419
Query: 529 KDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTN 588
K M + + K+ G SW E K +VH F +GD S K ++I+ +L EL+ +MK +GY PDT
Sbjct: 420 KSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTA 479
Query: 589 FVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIV 648
VLHD++EE+KE +L HSEKLAVAF ++ P G PI++ KNLR C DCH A KY S I
Sbjct: 480 SVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIK 539
Query: 649 QRKIILRDSNRFHCFEDGSCSCKDYW 674
R+I LRD +RFH F +G CSC DYW
Sbjct: 540 NREITLRDGSRFHHFINGKCSCGDYW 565
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 43/244 (17%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP+ + T++++C QG+++HA + + + L+ +Y+KCG L DA +
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 248
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAA----ISGYVSH-G 179
F E D D W++MI+ Y G ++A +LF+ M + + N + SH G
Sbjct: 249 AFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG 308
Query: 180 RPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVW 239
+ LE+F MM + K+ GL +
Sbjct: 309 LKDKGLELFDMMVE-------KYGFKPGLKH----------------------------Y 333
Query: 240 SALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV 298
+ ++DL G+ G LD+A I M + D+V W T++ C E +F++++ +
Sbjct: 334 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL--QI 391
Query: 299 RPNE 302
PN+
Sbjct: 392 DPND 395
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/609 (35%), Positives = 351/609 (57%), Gaps = 32/609 (5%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ Y +++ C+R LE G ++H+ +NF ++ + L+D+YAK
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK---------- 537
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
LG L+ A + +D SW I+GY + +AL
Sbjct: 538 ---------------------LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
FR M S++ L++ ++A A + L+ G++IH +G D +AL+ L
Sbjct: 577 TTFRQMLDR-GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y +CG ++E+ F+Q D ++W ++ + G EE +F + G+ N +TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+KA ++ A GK+VH + + GYD + +AL+ +Y+KCG+ A + F ++
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
+ VSW ++I ++++G AL F+ ++ S +P+ +T VGVLSAC+H GLVDKG+ Y
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
F S+ ++GL +HY CV+D+L R+G + A+ I M IKPD +W +LL C +H
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 486 NIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
N+E+ + AA+ L E+EPE+ ATY+ L+N+YA + +W R+ M+ +G+ K+PG+SWI
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 546 EIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFY 605
E+K +H F VGD +HP +IHE+ +L+K+ E GYV D +L++++ EQK+ +F
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 995
Query: 606 HSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFED 665
HSEKLA++FG++S P PI V KNLR C DCH +K+ SK+ R+II+RD+ RFH FE
Sbjct: 996 HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1055
Query: 666 GSCSCKDYW 674
G+CSCKDYW
Sbjct: 1056 GACSCKDYW 1064
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 211/448 (47%), Gaps = 38/448 (8%)
Query: 48 CQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISN 107
C+ + ++ D+ P+P +S++++AC + +LE G ++H L F ++ N
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 108 RLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFS 167
L+ LY G+L A+ +F M RD ++NT+I G ++ G+ E+A +LF +R H
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF----KRMHL- 382
Query: 168 WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
+ LE +SN TL+S + A +A L G+++H Y
Sbjct: 383 ---------------DGLE----------PDSN--TLASLVVACSADGTLFRGQQLHAYT 415
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI--HRCFEDGRREE 285
+ G + + ALL+LY KC ++ A F + ++VV W M+ + +D R
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN-- 473
Query: 286 GFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVD 345
F +FR + + PN+YT+ +LK C LG+++H +++ + ++ S L+D
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 346 LYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
+Y+K G A + + D+VSWT++I G+ Q D+AL F +L G + D++
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
+SAC + +G + H+ G ++ L +R G+ E+ +
Sbjct: 594 LTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Query: 466 SIKPDKFLWASLLGGCRIHGNIELAKRA 493
D W +L+ G + GN E A R
Sbjct: 653 E-AGDNIAWNALVSGFQQSGNNEEALRV 679
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 221/495 (44%), Gaps = 74/495 (14%)
Query: 65 RPSPRLYSTLIAACVR-HRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQ 123
RP+ + L+ C++ + +L++GR++H+ +S +L D Y
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY---------- 130
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
LF G L A K+FDEMP R F+WN I S E
Sbjct: 131 -LFK--------------------GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGE 169
Query: 184 ALEMF-RMMQKHESSNSNKFT--LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWS 240
+F RM+ ++ + N F+ L + + A + ++IH ++ GL VV +
Sbjct: 170 VFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV---EQIHARILYQGLRDSTVVCN 226
Query: 241 ALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRP 300
L+DLY + G +D AR +FD + KD SW MI ++ E LF D+ G+ P
Sbjct: 227 PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMP 286
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVF 360
Y F+ VL AC + +G+++HG ++++G+ ++ +ALV LY GN A +F
Sbjct: 287 TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 346
Query: 361 NQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD 420
+ + + D V++ +LI G +Q G ++A+ F+ + G +PD T ++ AC+ G +
Sbjct: 347 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF 406
Query: 421 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF---------NEAENII--------- 462
+G + H+ K G +++L A+ E EN++
Sbjct: 407 RG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 463 ---DNM-------------SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE-NP 505
D++ I P+++ + S+L C G++EL ++ + + + + N
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 506 ATYITLANIYANAGQ 520
L ++YA G+
Sbjct: 526 YVCSVLIDMYAKLGK 540
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 168/343 (48%), Gaps = 3/343 (0%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N +I Y++ G+++ AR++FD + +DH SW A ISG + EA+ +F M
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL-GI 284
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
+ SS L+A I L +G+++HG +++ G D V +AL+ LY G+L A
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
IF M +D V++ T+I+ + G E+ LF+ + G+ P+ T ++ AC+
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
G+++H Y ++G+ + AL++LY+KC + + A F + ++V W ++
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+ + F + P+Q T+ +L C G ++ G E HS K
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG-EQIHSQIIKTNFQL 523
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
A + +ID+ A+ G+ + A +I+ + K D W +++ G
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 297 GVRPNEYTFTGVLKAC-ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKI 355
G+RPN T +L+ C + + G+++H ++++G D L D Y G+
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 356 ASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTH 415
A +VF+++P + +W +I A F ++ P++ TF GVL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 416 AGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWA 475
+ +E H+ GL + +IDL +R+G + A + D + +K D W
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHSSWV 257
Query: 476 SLLGG 480
+++ G
Sbjct: 258 AMISG 262
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/610 (38%), Positives = 347/610 (56%), Gaps = 33/610 (5%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+PS +++ A R + G+ +H S F + IS L+D+YAKCGSL
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL----- 287
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
E AR+LFD M R+ SWN+ I YV + P+EA
Sbjct: 288 --------------------------ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
+ +F+ M E ++ L A A + L G+ IH V GLD + V ++L+
Sbjct: 322 MLIFQKMLD-EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y KC +D A +F ++ + +VSW MI ++GR + + F + V+P+ +T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
+ V+ A A+ + H K +HG +MR D F +ALVD+Y+KCG IA +F+ +
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
+ +W ++I G+ +G AL FE + K KP+ +TF+ V+SAC+H+GLV+ GL+
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
F+ +KE + + + DHY ++DLL R+GR NEA + I M +KP ++ ++LG C+IH
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
N+ A++AA LFE+ P++ ++ LANIY A W + +VR M +G+ K PG S
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 545 IEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLF 604
+EIK +VH F G T+HP + I+ FL +L +KE GYVPDTN VL VE + KEQ L
Sbjct: 681 VEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLS 739
Query: 605 YHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFE 664
HSEKLA++FG+++T GT I V KNLR C DCH A KY S + R+I++RD RFH F+
Sbjct: 740 THSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFK 799
Query: 665 DGSCSCKDYW 674
+G+CSC DYW
Sbjct: 800 NGACSCGDYW 809
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 247/489 (50%), Gaps = 24/489 (4%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGI 103
++ C+ + EA + +D LY T++ + L++ + + + P +
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV 135
Query: 104 FISNRLLDLYAKCGSLADAQ-------RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
+ LL + CG A+ + L DL + + YAK + +ARK+
Sbjct: 136 YNFTYLLKV---CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 157 FDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
FD MP RD SWN ++GY +G R ALEM + M + E+ + T+ S L A +A+
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRL 251
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
+ +GKEIHGY +R+G D + +AL+D+Y KCGSL+ AR +FD M++++VVSW +MI
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
++ +E +F+ ++ GV+P + + G L ACAD G+ +H + +G D
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
++L+ +Y KC A+ +F ++ LVSW ++I GFAQNG+P AL++F +
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
KPD T+V V++A + ++ H + + L ++D+ A+ G
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 457 EAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE------IEPENPATYIT 510
A I D MS + W +++ G HG +AA LFE I+P N T+++
Sbjct: 491 IARLIFDMMS-ERHVTTWNAMIDGYGTHG----FGKAALELFEEMQKGTIKP-NGVTFLS 544
Query: 511 LANIYANAG 519
+ + +++G
Sbjct: 545 VISACSHSG 553
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 2/258 (0%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
++I + + GL + + L+ L+ + GS+DEA +F+ + K V + TM+ +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
++ F + V P Y FT +LK C D A +GKE+HG +++ G+ FA
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 341 SALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTK 400
+ L ++Y+KC A +VF+++P DLVSW +++ G++QNG AL + + + K
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 401 PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAEN 460
P IT V VL A + L+ G E H + G + ++D+ A+ G A
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKE-IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 461 IIDNMSIKPDKFLWASLL 478
+ D M ++ + W S++
Sbjct: 293 LFDGM-LERNVVSWNSMI 309
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/632 (37%), Positives = 372/632 (58%), Gaps = 13/632 (2%)
Query: 51 KRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
+R +A + +D Y+T+I ++ +E+ R+ L F P + + +L
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVL 314
Query: 111 DLYAKCGSLAD---AQRLFDEMGDRDLC----SWNTMIAGYAKLGWLEQARKLFDEMPRR 163
CG L D A+ +++ M N +I YAK G + AR +F+ M +
Sbjct: 315 ---RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 164 DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEI 223
D SWN+ ISGY+ G EA+++F+MM E ++ T ++ + + L+ GK +
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGL 430
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRR 283
H +++G+ +D V +AL+D+Y KCG + ++ IF M D V+W T+I C G
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 284 EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSAL 343
G + + S V P+ TF L CA AA+ LGKE+H ++R GY+ G+AL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 344 VDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQ 403
+++YSKCG + +SRVF ++ R D+V+WT +I + G+ ++AL F + KSG PD
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 404 ITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIID 463
+ F+ ++ AC+H+GLVD+GL F +K + + +HYACV+DLL+RS + ++AE I
Sbjct: 611 VVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Query: 464 NMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAE 523
M IKPD +WAS+L CR G++E A+R + + E+ P++P I +N YA +W +
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730
Query: 524 EAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGY 583
+ +RK ++ + I K PG SWIE+ + VHVF GD S P+ I++ L L M +EGY
Sbjct: 731 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Query: 584 VPDTNFVLHDVEEEQKEQNLFY-HSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMK 642
+PD V ++EEE++++ L HSE+LA+AFG+++T PGTP++V KNLR C DCH K
Sbjct: 791 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 850
Query: 643 YTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
SKIV R+I++RD+NRFH F+DG+CSCKD W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 219/521 (42%), Gaps = 75/521 (14%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + ++I AC E G V+ F +F+ N L+D+Y++ G L A+++
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAA---------- 171
FDEM RDL SWN++I+GY+ G+ E+A +++ E+ D F+ ++
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 172 -------------------------ISGYVSHGRPREALEMFRMMQKHESSNSNK----- 201
++ Y+ RP +A +F M +S + N
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 202 ------------------------FTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
T+SS L A + L L K I+ Y+++AG L+
Sbjct: 284 LKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
V + L+D+Y KCG + AR +F+ M KD VSW ++I + G E LF+ +M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIAS 357
+ + T+ ++ A GK +H ++ G +AL+D+Y+KCG +
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 358 RVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAG 417
++F+ + D V+W ++I + G L + KS PD TF+ L C
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 418 LVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASL 477
G E H + G +I++ ++ G + + + MS + D W +
Sbjct: 524 AKRLGKE-IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGM 581
Query: 478 LGGCRIHGNIELAKRAANALFEIEPEN--PATYITLANIYA 516
+ ++G ++A ++E P + + +A IYA
Sbjct: 582 IYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 201/433 (46%), Gaps = 37/433 (8%)
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAG 143
L + RR+HAL S F S +L+D Y+ A + +F +
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS------------- 66
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
P ++ + WN+ I + +G EALE + +++ + S +K+T
Sbjct: 67 -----------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVS-PDKYT 108
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
S + A A + +G ++ ++ G + D V +AL+D+Y + G L AR +FD+M
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168
Query: 264 DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE 323
+D+VSW ++I G EE ++ +L S + P+ +T + VL A + G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 324 VHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ 383
+HG+ ++ G + + LV +Y K A RVF+++ D VS+ ++I G+ +
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL-EYFHSIKEKHGLMHTADHY 442
+ ++ F L KPD +T VL AC H L D L +Y ++ K G + +
Sbjct: 289 VEESVRMFLENLDQ-FKPDLLTVSSVLRACGH--LRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP 502
+ID+ A+ G A ++ ++M K D W S++ G G++ A + + +E
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 503 E-NPATYITLANI 514
+ + TY+ L ++
Sbjct: 405 QADHITYLMLISV 417
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 152/318 (47%), Gaps = 9/318 (2%)
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
+S L++++ + LR IH ++ GLD + L+D Y + +F ++
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 264 D-KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
K+V W ++I ++G E + L S V P++YTF V+KACA +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNG 382
V+ ++ +G++ F G+ALVD+YS+ G A +VF+++P DLVSW SLI G++ +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
+ AL + L S PD T VL A + +V +G + H K G+
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG-QGLHGFALKSGVNSVVVVN 245
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP 502
++ + + R +A + D M ++ D + +++ G + +E+ + + E
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVR-DSVSYNTMICG---YLKLEMVEESVRMFLENLD 301
Query: 503 ENPATYITLANIYANAGQ 520
+ +T++++ G
Sbjct: 302 QFKPDLLTVSSVLRACGH 319
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 232/612 (37%), Positives = 352/612 (57%), Gaps = 37/612 (6%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
R S ++++I C + L ++H F+ I L+ Y+KC ++ DA R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
LF E+G C N + SW A ISG++ + EA
Sbjct: 352 LFKEIG----CVGNVV--------------------------SWTAMISGFLQNDGKEEA 381
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
+++F M K + N+FT S L A I E+H +V+ + V +ALLD
Sbjct: 382 VDLFSEM-KRKGVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLD 436
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
Y K G ++EA +F + DKD+V+W+ M+ + G E +F +L G++PNE+T
Sbjct: 437 AYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFT 496
Query: 305 FTGVLKACA-DHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
F+ +L CA +A+ GK+ HG+ ++ D SAL+ +Y+K GN + A VF +
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
DLVSW S+I G+AQ+GQ +AL F+ + K K D +TF+GV +ACTHAGLV++G
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
+YF + + T +H +C++DL +R+G+ +A +I+NM +W ++L CR+
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRV 676
Query: 484 HGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
H EL + AA + ++PE+ A Y+ L+N+YA +G W E AKVRK M R + K+PG S
Sbjct: 677 HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Query: 544 WIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNL 603
WIE+K + + FL GD SHP I+ L +LS ++K+ GY PDT++VL D+++E KE L
Sbjct: 737 WIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVL 796
Query: 604 FYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCF 663
HSE+LA+AFG+I+TP G+P+ + KNLR C DCH +K +KI +R+I++RDSNRFH F
Sbjct: 797 AQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHF 856
Query: 664 -EDGSCSCKDYW 674
DG CSC D+W
Sbjct: 857 SSDGVCSCGDFW 868
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 223/462 (48%), Gaps = 46/462 (9%)
Query: 86 QGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYA 145
+G +VH + + I +SN L++LY KCG++ A+ LFD+ + + +WN+MI+GYA
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 146 KLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
++G EAL MF M+ + S + +
Sbjct: 272 -------------------------------ANGLDLEALGMFYSMRLNYVRLSES-SFA 299
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VD 264
S + A + LR +++H +V+ G D+ + +AL+ Y KC ++ +A +F ++
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 265 KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEV 324
+VVSWT MI ++ +EE LF ++ GVRPNE+T++ +L A + EV
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS----EV 415
Query: 325 HGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQP 384
H +++ Y+ S G+AL+D Y K G + A++VF+ I D+V+W++++ G+AQ G+
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 385 DRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC 444
+ A+ F L K G KP++ TF +L+ C + FH K L + +
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 445 VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE- 503
++ + A+ G AE + K D W S++ G HG A +A + E++
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQ---AMKALDVFKEMKKRK 591
Query: 504 ---NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGK 542
+ T+I + +AG EE + D+ +R P K
Sbjct: 592 VKMDGVTFIGVFAACTHAG-LVEEGEKYFDIMVRDCKIAPTK 632
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 207/433 (47%), Gaps = 42/433 (9%)
Query: 87 GRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAK 146
GR++H F+ + + L+D Y K + D +++FDEM +R++ +W T+I+GYA+
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 147 LGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
+ E L +F MQ +E + N FT ++
Sbjct: 172 -------------------------------NSMNDEVLTLFMRMQ-NEGTQPNSFTFAA 199
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
L A G ++H +V+ GLD V ++L++LY KCG++ +AR +FD+ K
Sbjct: 200 ALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
VV+W +MI +G E +F + + VR +E +F V+K CA+ +++H
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPD 385
+++ G+ +AL+ YSKC A R+F +I ++VSWT++I GF QN +
Sbjct: 320 SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE 379
Query: 386 RALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACV 445
A+ F + + G +P++ T+ +L+A + + + E+ + TA +
Sbjct: 380 EAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTA-----L 434
Query: 446 IDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPE 503
+D + G+ EA + + K D W+++L G G E A + L + I+P
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP- 492
Query: 504 NPATYITLANIYA 516
N T+ ++ N+ A
Sbjct: 493 NEFTFSSILNVCA 505
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 190/423 (44%), Gaps = 40/423 (9%)
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLA 209
L A LFD+ P RD S+ + + G+ GR +EA +F + H ++ S +
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF--LNIHRLGMEMDCSIFSSVL 100
Query: 210 AAAAIPCLRL-GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV 268
+A C L G+++H ++ G D V ++L+D Y K + + R +FD+M +++VV
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 269 SWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYM 328
+WTT+I + +E +LF + G +PN +TF L A+ G +VH +
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 329 MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
++ G D ++L++LY KCGN + A +F++ +V+W S+I G+A NG AL
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 389 HFFELLLKSGTKPDQITFVGVLSACT-----------HAGLVDKGLEYFHSIKEKHGLMH 437
F + + + + +F V+ C H +V G + +I+ + +
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 438 TA-----------DHYACVIDLLARSGRFN---------EAENIIDNM---SIKPDKFLW 474
+ CV ++++ + + EA ++ M ++P++F +
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 475 ASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIR 534
+ +L + E+ + +E + L + Y G+ E AKV ++ +
Sbjct: 401 SVILTALPVISPSEVHAQVVKTNYE---RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 457
Query: 535 GIV 537
IV
Sbjct: 458 DIV 460
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 42/329 (12%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ Q +EAVDL + R P+ YS ++ A + VHA +N+
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNY 424
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ LLD Y K G + +A ++F + D+D+ +W+ M+AGYA+ G E A K+F E
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAI-PCLR 218
+ + G + +P N+FT SS L AA +
Sbjct: 485 LTK-----------GGI---KP------------------NEFTFSSILNVCAATNASMG 512
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
GK+ HG+ +++ LD V SALL +Y K G+++ A +F + +KD+VSW +MI
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 572
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR-VGYDPGS 337
+ G+ + +F+++ V+ + TF GV AC G++ M+R P
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRP 366
S +VDLYS+ G + A +V +P P
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNP 661
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/632 (36%), Positives = 359/632 (56%), Gaps = 13/632 (2%)
Query: 51 KRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
++ K + L H P+ LY++LI V + + + + G+++
Sbjct: 59 RQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKH----GLYLHGFTF 114
Query: 111 DLYAKCGSLADAQRLFDEMG--------DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPR 162
L K + A +++L ++ + D+ + ++++ Y+ G L A KLFDE+P
Sbjct: 115 PLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD 174
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
R +W A SGY + GR REA+++F+ M + + F + L+A + L G+
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV-LSACVHVGDLDSGEW 233
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
I Y+ + + V + L++LY KCG +++AR +FD MV+KD+V+W+TMI +
Sbjct: 234 IVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSA 342
+EG LF ++ ++P++++ G L +CA A LG+ + R + F +A
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 343 LVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
L+D+Y+KCG VF ++ D+V + I G A+NG + F K G PD
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
TF+G+L C HAGL+ GL +F++I + L T +HY C++DL R+G ++A +I
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 463 DNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWA 522
+M ++P+ +W +LL GCR+ + +LA+ L +EP N Y+ L+NIY+ G+W
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWD 533
Query: 523 EEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEG 582
E A+VR M +G+ K PG SWIE++ +VH FL D SHP I+ L +L +M+ G
Sbjct: 534 EAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Query: 583 YVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMK 642
+VP T FV DVEEE+KE+ L YHSEKLAVA G+IST G I+V KNLR C DCH MK
Sbjct: 594 FVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMK 653
Query: 643 YTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
SKI +R+I++RD+NRFHCF +GSCSC DYW
Sbjct: 654 LISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/606 (37%), Positives = 352/606 (58%), Gaps = 35/606 (5%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+++ +AAC E+GR +H L + G+F N+++
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLV----VVSGLFY-NQIIG------------------- 400
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
N +++ Y K+G + ++R++ +MPRRD +WNA I GY P +AL F+
Sbjct: 401 -------NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 453
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIP--CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
M + E +SN T+ S L+A +P L GK +H Y+V AG + DE V ++L+ +Y K
Sbjct: 454 M-RVEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 511
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
CG L ++ +F+ + ++++++W M+ G EE L + GV ++++F+
Sbjct: 512 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 571
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
L A A A G+++HG +++G++ SF +A D+YSKCG ++ L
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 631
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
SW LI ++G + F +L+ G KP +TFV +L+AC+H GLVDKGL Y+
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 691
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
I GL +H CVIDLL RSGR EAE I M +KP+ +W SLL C+IHGN++
Sbjct: 692 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 751
Query: 489 LAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIK 548
++AA L ++EPE+ + Y+ +N++A G+W + VRK M + I KK SW+++K
Sbjct: 752 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 811
Query: 549 RQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSE 608
+V F +GD +HP+ +I+ L ++ K +KE GYV DT+ L D +EEQKE NL+ HSE
Sbjct: 812 DKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSE 871
Query: 609 KLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSC 668
+LA+A+ ++STP G+ +++FKNLR C DCH+ K+ S+++ R+I+LRD RFH FE G C
Sbjct: 872 RLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLC 931
Query: 669 SCKDYW 674
SCKDYW
Sbjct: 932 SCKDYW 937
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 182/353 (51%), Gaps = 6/353 (1%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQK-HES 196
N++I+ +G ++ A +FD+M RD SWN+ + Y +G E+ +F +M++ H+
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 197 SNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
NS T+S+ L+ + + G+ IHG +V+ G D V + LL +Y G EA
Sbjct: 259 VNST--TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 316
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+F QM KD++SW +++ DGR + L ++ SG N TFT L AC
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 376
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
G+ +HG ++ G G+ALV +Y K G + RV Q+PR D+V+W +LIG
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 436
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAG-LVDKGLEYFHSIKEKHGL 435
G+A++ PD+AL F+ + G + IT V VLSAC G L+++G + H+ G
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG-KPLHAYIVSAGF 495
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
+I + A+ G + ++++ + + + + W ++L HG+ E
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 547
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 218/454 (48%), Gaps = 39/454 (8%)
Query: 65 RPSPRLYSTLIAACVRHRAL-EQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQ 123
+PS + ++L+ AC R ++ +G +VH S + +++S +L LY G ++
Sbjct: 55 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVS--- 111
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
CS RK+F+EMP R+ SW + + GY G P E
Sbjct: 112 -----------CS-----------------RKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
+++++ M + E N+ ++S +++ + LG++I G +V++GL+ V ++L+
Sbjct: 144 VIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLI 202
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
+ G G++D A IFDQM ++D +SW ++ ++G EE F +F + N
Sbjct: 203 SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 262
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
T + +L + G+ +HG ++++G+D + L+ +Y+ G + A+ VF Q+
Sbjct: 263 TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 322
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
P DL+SW SL+ F +G+ AL ++ SG + +TF L+AC +KG
Sbjct: 323 PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG- 381
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
H + GL + ++ + + G +E+ ++ M + D W +L+GG
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG--- 437
Query: 484 HGNIELAKRAANALFEIEPENPAT-YITLANIYA 516
+ E +A A + E ++ YIT+ ++ +
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 10/339 (2%)
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
Y K G ++ AR LFD MP R+ SWN +SG V G E +E FR M S+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
S A + R G ++HG++ ++GL D V +A+L LYG G + +R +F++M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 264 DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE 323
D++VVSWT+++ + G EE +++ + G GV NE + + V+ +C E LG++
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 324 VHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ 383
+ G +++ G + ++L+ + GN A+ +F+Q+ D +SW S+ +AQNG
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
+ + F L+ + + + T +LS H G H + K G D
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGF----DSVV 296
Query: 444 CVIDLLAR----SGRFNEAENIIDNMSIKPDKFLWASLL 478
CV + L R +GR EA + M K D W SL+
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM 334
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y K G + AR +FD M ++ VSW TM+ G EG FR + G++P+ +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 305 FTGVLKACADHAAE-HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
++ AC + G +VHG++ + G + +A++ LY G + +VF ++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
P ++VSWTSL+ G++ G+P+ + ++ + G ++ + V+S+C G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
+ + K GL +I +L G + A I D MS + D W S+
Sbjct: 181 QIIGQVV-KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQ 238
Query: 484 HGNIELAKRAANALFEIEPE-NPATYITLANI 514
+G+IE + R + + E N T TL ++
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/576 (38%), Positives = 344/576 (59%), Gaps = 17/576 (2%)
Query: 109 LLDLYAKCGSLADAQRL------FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPR 162
+L L A+ G++ +A+ D GD L N +I Y+K G++E AR++FD M
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTL--LNVLINAYSKCGFVELARQVFDGMLE 124
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA----AIPCLR 218
R SWN I Y + EAL++F M ++E ++FT+SS L+A A+ C
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEM-RNEGFKFSEFTISSVLSACGVNCDALEC-- 181
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
K++H V+ +DL+ V +ALLDLY KCG + +A +F+ M DK V+W++M+
Sbjct: 182 --KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
++ EE L+R + N++T + V+ AC++ AA GK++H + + G+ F
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
S+ VD+Y+KCG+ + + +F+++ +L W ++I GFA++ +P + FE + + G
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
P+++TF +LS C H GLV++G +F ++ +GL HY+C++D+L R+G +EA
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANA 518
+I ++ P +W SLL CR++ N+ELA+ AA LFE+EPEN ++ L+NIYA
Sbjct: 420 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 479
Query: 519 GQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKM 578
QW E AK RK + + K GKSWI+IK +VH F VG++ HP+IR+I L L K
Sbjct: 480 KQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKF 539
Query: 579 KEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCH 638
++ GY P LHDVE +KE+ L HSEKLA+ FG++ P +P+++ KNLR CVDCH
Sbjct: 540 RKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCH 599
Query: 639 TAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
MK S +R II+RD NRFH F DG CSC D+W
Sbjct: 600 EFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 147/309 (47%), Gaps = 36/309 (11%)
Query: 72 STLIAAC-VRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
S++++AC V ALE +++H L+ + +++ LLDLYAKCG + DA ++F+ M
Sbjct: 166 SSVLSACGVNCDALE-CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D+ +W++M+A GYV + EAL ++R
Sbjct: 225 DKSSVTWSSMVA-------------------------------GYVQNKNYEEALLLYRR 253
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
Q+ S N+FTLSS + A + + L GK++H + ++G + V S+ +D+Y KCG
Sbjct: 254 AQRM-SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
SL E+ IF ++ +K++ W T+I + R +E LF + G+ PNE TF+ +L
Sbjct: 313 SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Query: 311 ACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDL 368
C G+ M G P S +VD+ + G A + IP P
Sbjct: 373 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 432
Query: 369 VSWTSLIGG 377
W SL+
Sbjct: 433 SIWGSLLAS 441
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 38/249 (15%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPR----LYSTLIAACVRHRALEQGRRV 90
K++ + + Q K +EA+ L R S S++I AC AL +G+++
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 91 HALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWL 150
HA+ S F +F+++ +D+YAKCGSL ++ +F E+ +++L WNT+I+G+AK
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK---- 341
Query: 151 EQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
H RP+E + +F MQ+ + + N+ T SS L+
Sbjct: 342 ---------------------------HARPKEVMILFEKMQQ-DGMHPNEVTFSSLLSV 373
Query: 211 AAAIPCLRLGKEIHGYL-VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVV 268
+ G+ + GL + V +S ++D+ G+ G L EA + + D
Sbjct: 374 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 433
Query: 269 SWTTMIHRC 277
W +++ C
Sbjct: 434 IWGSLLASC 442
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/590 (40%), Positives = 354/590 (60%), Gaps = 17/590 (2%)
Query: 98 NFIPGIFISNRLLDLYAKCGSLADA---QRLFDE---MG-DRDLCSWNTMIAGYAKLGWL 150
+ +PG F L+ + C SL A Q++ E +G D ++ N ++ YA+ G+L
Sbjct: 410 DILPGSFT---LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 151 EQARKLFDEMPRRDHFSWNAAISGYVSHGRPR-EALEMFRMMQKHESSNSNKFTLSSGLA 209
+ RK+F MP D SWN+ I R EA+ F Q+ N+ T SS L+
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR-AGQKLNRITFSSVLS 525
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK-DVV 268
A +++ LGK+IHG ++ + + +AL+ YGKCG +D IF +M ++ D V
Sbjct: 526 AVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 269 SWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYM 328
+W +MI + + L ++ +G R + + + VL A A A G EVH
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACS 645
Query: 329 MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
+R + GSALVD+YSKCG A R FN +P + SW S+I G+A++GQ + AL
Sbjct: 646 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 705
Query: 389 HFFELL-LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 447
FE + L T PD +TFVGVLSAC+HAGL+++G ++F S+ + +GL +H++C+ D
Sbjct: 706 KLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMAD 765
Query: 448 LLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC-RIHG-NIELAKRAANALFEIEPENP 505
+L R+G ++ E+ I+ M +KP+ +W ++LG C R +G EL K+AA LF++EPEN
Sbjct: 766 VLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENA 825
Query: 506 ATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIR 565
Y+ L N+YA G+W + K RK M+ + K+ G SW+ +K VH+F+ GD SHP
Sbjct: 826 VNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDAD 885
Query: 566 DIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGT-P 624
I++ L EL++KM++ GYVP T F L+D+E+E KE+ L YHSEKLAVAF + + T P
Sbjct: 886 VIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLP 945
Query: 625 IKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
I++ KNLR C DCH+A KY SKI R+IILRDSNRFH F+DG+CSC D+W
Sbjct: 946 IRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 239/483 (49%), Gaps = 52/483 (10%)
Query: 46 ALCQQKRLKEAVDLLHHVDR---PSPRLYSTLIAACVRHR-----ALEQGRRVHALTKSS 97
L +QK +EA L ++ SP Y L+++ + L++GR VH ++
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Query: 98 NFIPGIF-ISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
+ + I N L+++YAKCGS+ADA+R+F M D+D SWN+MI G L+Q
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG------LDQ---- 392
Query: 157 FDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
+G EA+E ++ M++H+ FTL S L++ A++
Sbjct: 393 ---------------------NGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKW 430
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
+LG++IHG ++ G+DL+ V +AL+ LY + G L+E R IF M + D VSW ++I
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 277 CFEDGRR-EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
R E F + +G + N TF+ VL A + + LGK++HG ++
Sbjct: 491 LARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIAD 550
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFELL 394
+ +AL+ Y KCG ++F+++ R D V+W S+I G+ N +AL +
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFM 610
Query: 395 LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 454
L++G + D + VLSA +++G+E H+ + L + ++D+ ++ GR
Sbjct: 611 LQTGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 455 FNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE---IEPENPATYITL 511
+ A + M ++ + + W S++ G HG E A + LFE ++ + P ++T
Sbjct: 670 LDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALK----LFETMKLDGQTPPDHVTF 724
Query: 512 ANI 514
+
Sbjct: 725 VGV 727
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 225/477 (47%), Gaps = 46/477 (9%)
Query: 65 RPSPRLYSTLIA-ACVRH----RALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSL 119
RP+ + +L+ AC R LEQ + + S + +F+ + L+ +AK GSL
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQ---IMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 120 ADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHG 179
+ A+++F++M R+ + N ++ G + W E+A KLF +M S
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVS------------ 307
Query: 180 RPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL-DLDEVV 238
P + + S+ +++L+ + L+ G+E+HG+++ GL D +
Sbjct: 308 -PESYVILL--------SSFPEYSLAEEVG-------LKKGREVHGHVITTGLVDFMVGI 351
Query: 239 WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV 298
+ L+++Y KCGS+ +AR +F M DKD VSW +MI ++G E ++ + +
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 299 RPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR 358
P +T L +CA LG+++HG +++G D +AL+ LY++ G +
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 359 VFNQIPRPDLVSWTSLIGGFAQNGQ--PDRALHFFELLLKSGTKPDQITFVGVLSACTHA 416
+F+ +P D VSW S+IG A++ + P+ + F ++G K ++ITF VLSA +
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN-AQRAGQKLNRITFSSVLSAVSSL 530
Query: 417 GLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWAS 476
+ G + H + K+ + A +I + G + E I M+ + D W S
Sbjct: 531 SFGELGKQ-IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 477 LLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEI 533
++ G IH + LAK F ++ A + + +A A + + ME+
Sbjct: 590 MISG-YIHNEL-LAKALDLVWFMLQTGQRLDSFMYATVLS---AFASVATLERGMEV 641
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 180/375 (48%), Gaps = 19/375 (5%)
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
RL+ D+D+ N +I Y + G ARK+FDEMP R+ SW +SGY +G +E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL--GKEIHGYLVRAGLDLDEVVWSA 241
AL R M K E SN++ S L A I + + G++IHG + + +D VV +
Sbjct: 86 ALVFLRDMVK-EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 242 LLDLYGKC-GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRP 300
L+ +Y KC GS+ A F + K+ VSW ++I + G + F +F + G RP
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 301 NEYTFTG-VLKACADHAAE-HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR 358
EYTF V AC+ + L +++ + + G F GS LV ++K G+ A +
Sbjct: 205 TEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 359 VFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGL 418
VFNQ+ + V+ L+ G + + A F + + S ++V +LS+ L
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-MDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 419 VDK-GLEYFHSIKEKHGLMHT---ADHYACV----IDLLARSGRFNEAENIIDNMSIKPD 470
++ GL+ +E HG + T D + +++ A+ G +A + M+ K D
Sbjct: 324 AEEVGLK---KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK-D 379
Query: 471 KFLWASLLGGCRIHG 485
W S++ G +G
Sbjct: 380 SVSWNSMITGLDQNG 394
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 151/324 (46%), Gaps = 10/324 (3%)
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRR 283
H L + LD D + + L++ Y + G AR +FD+M ++ VSW ++ +G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 284 EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHL--GKEVHGYMMRVGYDPGSFAGS 341
+E RD++ G+ N+Y F VL+AC + + + G+++HG M ++ Y + +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 342 ALVDLYSKC-GNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTK 400
L+ +Y KC G+ A F I + VSW S+I ++Q G A F + G++
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 401 PDQITFVG-VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
P + TF V +AC+ + LE +K GL+ + ++ A+SG + A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIHGNIELAK--RAANALFEIEPENPATYITLANIYAN 517
+ + M + L ++G R E K N++ ++ PE +Y+ L + +
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE---SYVILLSSFPE 320
Query: 518 AGQWAEEAKVRKDMEIRGIVKKPG 541
AEE ++K E+ G V G
Sbjct: 321 Y-SLAEEVGLKKGREVHGHVITTG 343
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 155/344 (45%), Gaps = 43/344 (12%)
Query: 44 INALCQQKR-LKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALTKSSN 98
I AL + +R L EAV + R +L +S++++A E G+++H L +N
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD-RDLCSWNTMIAGYAKLGWLEQARKLF 157
N L+ Y KCG + +++F M + RD +WN+MI+GY L +A L
Sbjct: 548 IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDL- 606
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
++ M+Q + +S F ++ L+A A++ L
Sbjct: 607 -----------------------------VWFMLQTGQRLDS--FMYATVLSAFASVATL 635
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
G E+H VRA L+ D VV SAL+D+Y KCG LD A F+ M ++ SW +MI
Sbjct: 636 ERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGY 695
Query: 278 FEDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAA--EHLGKEVHGYMMRVGYD 334
G+ EE LF + G P+ TF GVL AC+ HA E K G
Sbjct: 696 ARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS-HAGLLEEGFKHFESMSDSYGLA 754
Query: 335 PGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
P S + D+ + G ++P +P+++ W +++G
Sbjct: 755 PRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 46/262 (17%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRV 90
+ N + I+ + L +A+DL+ + + RL Y+T+++A LE+G V
Sbjct: 582 RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
Query: 91 HALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWL 150
HA + + + + + L+D+Y+KCG L A R F+ M R+ SWN+MI+GYA+ G
Sbjct: 642 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQG 701
Query: 151 EQARKLFDEMPRR-----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
E+A KLF+ M DH ++ +S G E KH S S+ + L+
Sbjct: 702 EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF-------KHFESMSDSYGLA 754
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK 265
+ +S + D+ G+ G LD+ ++M K
Sbjct: 755 PRIEH----------------------------FSCMADVLGRAGELDKLEDFIEKMPMK 786
Query: 266 -DVVSWTTMIHRCFE-DGRREE 285
+V+ W T++ C +GR+ E
Sbjct: 787 PNVLIWRTVLGACCRANGRKAE 808
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 35/227 (15%)
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
+++C H + H + + D + + L++ Y + G++ A +VF+++P +
Sbjct: 10 VQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
VSW ++ G+++NG+ AL F ++K G +Q FV VL AC G V G+ +
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--GILFGRQ 125
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
I HGLM + + ++ N+ I S+ C I
Sbjct: 126 I---HGLMFKLSY---------------AVDAVVSNVLI--------SMYWKC-----IG 154
Query: 489 LAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
A A +IE +N ++ ++ ++Y+ AG ++ M+ G
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 329/572 (57%), Gaps = 47/572 (8%)
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE--ALEMFRMMQKHESSNSNKFTLSSG 207
L+ A K+F++MP+R+ FSWN I G+ + A+ +F M E N+FT S
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDE------------------------------- 236
L A A ++ GK+IHG ++ G DE
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 237 --------------VVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
V+W+ ++D Y + G AR +FD+M + VVSW TMI +G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSA 342
++ +FR++ +RPN T VL A + + LG+ +H Y G GSA
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 343 LVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
L+D+YSKCG + A VF ++PR ++++W+++I GFA +GQ A+ F + ++G +P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
+ ++ +L+AC+H GLV++G YF + GL +HY C++DLL RSG +EAE I
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 463 DNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWA 522
NM IKPD +W +LLG CR+ GN+E+ KR AN L ++ P + Y+ L+N+YA+ G W+
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 523 EEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEG 582
E +++R M+ + I K PG S I+I +H F+V D SHPK ++I+ L E+S K++ G
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Query: 583 YVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMK 642
Y P T VL ++EEE KE L YHSEK+A AFG+IST PG PI++ KNLR C DCH+++K
Sbjct: 555 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 614
Query: 643 YTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
SK+ +RKI +RD RFH F+DGSCSC DYW
Sbjct: 615 LISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 181/346 (52%), Gaps = 17/346 (4%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + +++ AC + +++G+++H L F F+ + L+ +Y CG + DA+ L
Sbjct: 126 PNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVL 185
Query: 126 FDE---------MGDR-----DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAA 171
F + M DR ++ WN MI GY +LG + AR LFD+M +R SWN
Sbjct: 186 FYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 172 ISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAG 231
ISGY +G ++A+E+FR M+K + N TL S L A + + L LG+ +H Y +G
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGD-IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 232 LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFR 291
+ +D+V+ SAL+D+Y KCG +++A +F+++ ++V++W+ MI+ G+ + F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 292 DLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKC 350
+ +GVRP++ + +L AC+ G+ M+ V G +P +VDL +
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 424
Query: 351 GNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
G A +P +PD V W +L+G G + +L+
Sbjct: 425 GLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILM 470
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/608 (37%), Positives = 351/608 (57%), Gaps = 35/608 (5%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
S++ +AC L G+++H+ S + + S L+D+YAKC AD
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCS--AD---------- 318
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSH-GRPREALEMFRM 190
G ++ RK+FD M SW A I+GY+ + EA+ +F
Sbjct: 319 ----------------GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M N FT SS A + R+GK++ G + GL + V ++++ ++ K
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
+++A+ F+ + +K++VS+ T + + E+ F L ++ + + +TF +L
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLS 482
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
A+ + G+++H ++++G +AL+ +YSKCG+ ASRVFN + +++S
Sbjct: 483 GVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK 430
WTS+I GFA++G R L F +++ G KP+++T+V +LSAC+H GLV +G +F+S+
Sbjct: 543 WTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMY 602
Query: 431 EKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
E H + +HYAC++DLL R+G +A I+ M + D +W + LG CR+H N EL
Sbjct: 603 EDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELG 662
Query: 491 KRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQ 550
K AA + E++P PA YI L+NIYA AG+W E ++R+ M+ R +VK+ G SWIE+ +
Sbjct: 663 KLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDK 722
Query: 551 VHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQN----LFYH 606
+H F VGDT+HP I++ L L ++K GYVPDT+ VLH +EEE E L+ H
Sbjct: 723 IHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQH 782
Query: 607 SEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDG 666
SEK+AVAFG+IST P++VFKNLR C DCH AMKY S + R+I+LRD NRFH F+DG
Sbjct: 783 SEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDG 842
Query: 667 SCSCKDYW 674
CSC DYW
Sbjct: 843 KCSCNDYW 850
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 233/507 (45%), Gaps = 58/507 (11%)
Query: 53 LKEAVDLLHHVDRPSPR-----LYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISN 107
L+ AV L + R R +S+L+ +C+R R G+ VHA + P + N
Sbjct: 42 LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 108 RLLDLYAKCGSLADAQRLFDEM---GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRD 164
L+ LY+K G A A+ +F+ M G RD+ SW+ M+A Y G A K+F E
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF---- 157
Query: 165 HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
LE+ + N + ++ + A + + +G+
Sbjct: 158 --------------------LELGLV--------PNDYCYTAVIRACSNSDFVGVGRVTL 189
Query: 225 GYLVRAG-LDLDEVVWSALLDLYGKC-GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
G+L++ G + D V +L+D++ K S + A +FD+M + +VV+WT MI RC + G
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSA 342
E F D++ SG +++T + V ACA+ LGK++H + +R G +
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECS 307
Query: 343 LVDLYSKC---GNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ-PDRALHFF-ELLLKS 397
LVD+Y+KC G+ +VF+++ ++SWT+LI G+ +N A++ F E++ +
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG 367
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
+P+ TF AC + G + K GL + VI + +S R +
Sbjct: 368 HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ-AFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 458 AENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPA-TYITLANIYA 516
A+ +++S K L G CR + N E A + + + E E A T+ +L + A
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCR-NLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 517 NAGQWAEEAKVRKDMEIRGIVKKPGKS 543
N G +RK +I V K G S
Sbjct: 486 NVGS------IRKGEQIHSQVVKLGLS 506
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 167/335 (49%), Gaps = 16/335 (4%)
Query: 175 YVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL 234
+++ G R A+ +M + + T SS L + RLGK +H L+ ++
Sbjct: 36 HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP 95
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMV---DKDVVSWTTMIHRCFEDGRREEGFSLFR 291
D V++++L+ LY K G +A +F+ M +DVVSW+ M+ +GR + +F
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 292 DLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG-YDPGSFAGSALVDLYSKC 350
+ + G+ PN+Y +T V++AC++ +G+ G++M+ G ++ G +L+D++ K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 351 GNT-KIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGV 409
N+ + A +VF+++ ++V+WT +I Q G P A+ FF ++ SG + D+ T V
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 410 LSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC-VIDLLAR---SGRFNEAENIIDNM 465
SAC + G + HS + GL+ D C ++D+ A+ G ++ + D M
Sbjct: 276 FSACAELENLSLG-KQLHSWAIRSGLV---DDVECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 466 SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEI 500
W +L+ G N LA A N E+
Sbjct: 332 E-DHSVMSWTALITG--YMKNCNLATEAINLFSEM 363
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 156/341 (45%), Gaps = 61/341 (17%)
Query: 55 EAVDLLH------HVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNR 108
EA++L HV+ P+ +S+ AC G++V ++N
Sbjct: 355 EAINLFSEMITQGHVE-PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSW 168
++ ++ K + DAQR F+ + +++L S+NT + G + EQA KL E+ R+
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL--- 470
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV 228
+ FT +S L+ A + +R G++IH +V
Sbjct: 471 -----------------------------GVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 229 RAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFS 288
+ GL ++ V +AL+ +Y KCGS+D A +F+ M +++V+SWT+MI G + GF+
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI-----TGFAKHGFA 556
Query: 289 L-----FRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYM-MRVGYD-----PGS 337
+ F ++ GV+PNE T+ +L AC+ H+G G+ Y+ P
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACS-----HVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
+ +VDL + G A N +P + D++ W + +G
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALT 94
++ ++ C+ ++A LL + S +++L++ ++ +G ++H+
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGW----L 150
+ N L+ +Y+KCGS+ A R+F+ M +R++ SW +MI G+AK G+ L
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 151 EQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMM 191
E ++ +E + + ++ A +S G E F M
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/606 (36%), Positives = 360/606 (59%), Gaps = 44/606 (7%)
Query: 110 LDLYAKCGSLADAQRL---FDEMGDRDLCSW-NTMIAGYAKLGWLEQARKLFDEMPRRDH 165
L L A+ +L A+ L ++G C NT++ Y K G A ++FDEMP RDH
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 166 FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHG 225
+W + ++ + L +F + + F S+ + A A + + G+++H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 226 YLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREE 285
+ + + DEVV S+L+D+Y KCG L+ A+ +FD + K+ +SWT M+ + GR+EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 286 GFSLFRDL-----------------MGSGVRP---------------NEYTFTGVLKACA 313
LFR L G G+ + + ++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 314 DHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTS 373
+ AA G++VHG ++ +G+D F +AL+D+Y+KC + A +F+++ D+VSWTS
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 374 LIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH 433
LI G AQ+GQ ++AL ++ ++ G KP+++TFVG++ AC+H G V+KG E F S+ + +
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 434 GLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRA 493
G+ + HY C++DLL RSG +EAEN+I M PD+ WA+LL C+ G ++ R
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 494 ANALF-EIEPENPATYITLANIYANAGQWAEEAKVRK---DMEIRGIVKKPGKSWIEIKR 549
A+ L + ++P+TYI L+NIYA+A W + ++ R+ +ME+R K PG S +E+++
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVR---KDPGHSSVEVRK 486
Query: 550 QVHVFLVGDTSHPKIRDIHEFLGELSKKMK-EEGYVPDTNFVLHDVEEEQKEQNLFYHSE 608
+ VF G+TSHP DI L +L ++M+ GYVPDT+++LHD++E++KE+ LF+HSE
Sbjct: 487 ETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSE 546
Query: 609 KLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSC 668
+ AVA+G++ PGTPI++ KNLR C DCH +K+ S+I +R+II+RD+ R+H F+ G C
Sbjct: 547 RSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKC 606
Query: 669 SCKDYW 674
SC D+W
Sbjct: 607 SCNDFW 612
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 131/305 (42%), Gaps = 56/305 (18%)
Query: 42 EAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIP 101
EA + + +R E VD+L P + S+++ AC A GR+VH L + F
Sbjct: 220 EAFSVFTEMRR--ERVDIL------DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDS 271
Query: 102 GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP 161
+FISN L+D+YAKC + A+ +F M RD+ SW ++I G A+ G E+A L+D+M
Sbjct: 272 CVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM- 330
Query: 162 RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGK 221
VSHG N+ T + A + + + G+
Sbjct: 331 --------------VSHG-----------------VKPNEVTFVGLIYACSHVGFVEKGR 359
Query: 222 EIHGYLVR-AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMIHRCFE 279
E+ + + G+ ++ LLDL G+ G LDEA + M D +W ++ C
Sbjct: 360 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 419
Query: 280 DGRREEGFSLFRDLMGSG--VRPNEYTFTGVLKACA------DHAAEHLGKEVHGYMMRV 331
GR + G + L+ S P+ Y + A A A LG+ M V
Sbjct: 420 QGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGE------MEV 473
Query: 332 GYDPG 336
DPG
Sbjct: 474 RKDPG 478
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/633 (35%), Positives = 360/633 (56%), Gaps = 34/633 (5%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGI 103
I+ CQ KEA+ L + + +L++AC +G +H+ + +
Sbjct: 223 ISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 104 FISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR 163
F+SN+L+DLYA+ G L +K+FD M R
Sbjct: 283 FVSNKLIDLYAE-------------------------------FGRLRDCQKVFDRMYVR 311
Query: 164 DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEI 223
D SWN+ I Y + +P A+ +F+ M + + TL S + + + +R + +
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 224 HGYLVRAGLDLDEV-VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
G+ +R G L+++ + +A++ +Y K G +D AR +F+ + + DV+SW T+I ++G
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430
Query: 283 REEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGS 341
E ++ + G + N+ T+ VL AC+ A G ++HG +++ G F +
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 342 ALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
+L D+Y KCG + A +F QIPR + V W +LI +G ++A+ F+ +L G KP
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 402 DQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
D ITFV +LSAC+H+GLVD+G F ++ +G+ + HY C++D+ R+G+ A
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 462 IDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQW 521
I +MS++PD +W +LL CR+HGN++L K A+ LFE+EPE+ ++ L+N+YA+AG+W
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670
Query: 522 AEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEE 581
++R +G+ K PG S +E+ +V VF G+ +HP +++ L L K+K
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
Query: 582 GYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAM 641
GYVPD FVL DVE+++KE L HSE+LA+AF +I+TP T I++FKNLR C DCH+
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVT 790
Query: 642 KYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
K+ SKI +R+II+RDSNRFH F++G CSC DYW
Sbjct: 791 KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 237/524 (45%), Gaps = 78/524 (14%)
Query: 73 TLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR 132
TL C L+ + +HA S I + IS +L++LY G++A A+ FD + +R
Sbjct: 59 TLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 133 DLCSWNTMIAGYAKLG---------------------------WLEQARKLFDE-----M 160
D+ +WN MI+GY + G L+ R + D +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 161 PRRDHFSWNAAISGYVSHGRPR-----EALEMFRMMQKHESSNSN--------------K 201
+ F W+ ++ + H R A +F M + + N
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 202 FTLSSGLAAAAAIPCLRL------------GKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
TLS+GL A ++ + L G IH Y ++ GL+ + V + L+DLY +
Sbjct: 236 LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
G L + + +FD+M +D++SW ++I + + SLF+++ S ++P+ T +
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFA-GSALVDLYSKCGNTKIASRVFNQIPRPDL 368
+ + V G+ +R G+ G+A+V +Y+K G A VFN +P D+
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSG-TKPDQITFVGVLSACTHAGLVDKGLEYFH 427
+SW ++I G+AQNG A+ + ++ + G +Q T+V VL AC+ AG + +G++ H
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK-LH 474
Query: 428 SIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNI 487
K+GL + D+ + GR +A ++ + + + W +L+ HG+
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHG 533
Query: 488 ELAKRAANALFE--IEPENPATYITLANIYANA-----GQWAEE 524
E A + + ++P++ T++TL + +++ GQW E
Sbjct: 534 EKAVMLFKEMLDEGVKPDH-ITFVTLLSACSHSGLVDEGQWCFE 576
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 193/442 (43%), Gaps = 32/442 (7%)
Query: 112 LYAKCGSLADAQ----RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFS 167
L+ C +L A+ RL +++C ++ Y LG + AR FD + RD ++
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 168 WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
WN ISGY G E + F + + T S L A + G +IH
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLA 176
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGF 287
++ G D V ++L+ LY + ++ AR +FD+M +D+ SW MI + G +E
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 288 SLFRDLMGSGVRP-NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
+L +G+R + T +L AC + + G +H Y ++ G + F + L+DL
Sbjct: 237 TL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y++ G + +VF+++ DL+SW S+I + N QP RA+ F+ + S +PD +T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
+ + S + G + K + V+ + A+ G + A + + +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQW----- 521
D W +++ G +G A A +E E I AN G W
Sbjct: 412 -NTDVISWNTIISGYAQNG---FASEAIEMYNIMEEE--------GEIAANQGTWVSVLP 459
Query: 522 --AEEAKVRKDMEIRGIVKKPG 541
++ +R+ M++ G + K G
Sbjct: 460 ACSQAGALRQGMKLHGRLLKNG 481
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/633 (36%), Positives = 358/633 (56%), Gaps = 42/633 (6%)
Query: 53 LKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNR 108
LK ++ L + R P+ +ST + AC ALE+G ++H F + + N
Sbjct: 88 LKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNS 147
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSW 168
L+D+Y+KC G + +A K+F + R SW
Sbjct: 148 LVDMYSKC-------------------------------GRINEAEKVFRRIVDRSLISW 176
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHE-SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
NA I+G+V G +AL+ F MMQ+ ++FTL+S L A ++ + GK+IHG+L
Sbjct: 177 NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 228 VRAGLDL--DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREE 285
VR+G + +L+DLY KCG L AR FDQ+ +K ++SW+++I ++G E
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 286 GFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVD 345
LF+ L + + + + ++ AD A GK++ +++ + +++VD
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVD 356
Query: 346 LYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
+Y KCG A + F ++ D++SWT +I G+ ++G +++ F +L+ +PD++
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
++ VLSAC+H+G++ +G E F + E HG+ +HYACV+DLL R+GR EA+++ID M
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Query: 466 SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEA 525
IKP+ +W +LL CR+HG+IEL K L I+ +NPA Y+ ++N+Y AG W E+
Sbjct: 477 PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG 536
Query: 526 KVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEE-GYV 584
R+ I+G+ K+ G SW+EI+R+VH F G+ SHP I E L E ++++EE GYV
Sbjct: 537 NARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYV 596
Query: 585 PDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIIS---TPPGTPIKVFKNLRTCVDCHTAM 641
LHD+++E KE+NL HSEKLA+ + + G I+VFKNLR CVDCH +
Sbjct: 597 YGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFI 656
Query: 642 KYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
K SKI + ++RD+ RFH FEDG CSC DYW
Sbjct: 657 KGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 232/479 (48%), Gaps = 52/479 (10%)
Query: 73 TLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR 132
+++ C R +QG +VH S + SN L+D+Y KC A ++FD M +R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
++ SW+ +++G+ G L+ + LF EM R+ +
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-------------------------- 104
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
N+FT S+ L A + L G +IHG+ ++ G ++ V ++L+D+Y KCG +
Sbjct: 105 ------PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV--RPNEYTFTGVLK 310
+EA +F ++VD+ ++SW MI G + F + + + RP+E+T T +LK
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFA--GSALVDLYSKCGNTKIASRVFNQIPRPDL 368
AC+ + GK++HG+++R G+ S A +LVDLY KCG A + F+QI +
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY-FH 427
+SW+SLI G+AQ G+ A+ F+ L + ++ D ++ L+ +G +
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 428 SIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNI 487
++K GL + V+D+ + G +EAE M +K D W ++ G HG
Sbjct: 339 AVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHG-- 393
Query: 488 ELAKRAANALFE-----IEPENPATYITLANIYANAGQWAE-EAKVRKDMEIRGIVKKP 540
L K++ +E IEP+ Y+ + + +++G E E K +E GI KP
Sbjct: 394 -LGKKSVRIFYEMLRHNIEPDE-VCYLAVLSACSHSGMIKEGEELFSKLLETHGI--KP 448
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 41/260 (15%)
Query: 300 PNE-YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR 358
PN+ +L+ C G +VH Y+++ G + L+D+Y KC +A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 359 VFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGL 418
VF+ +P ++VSW++L+ G NG +L F + + G P++ TF L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 419 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAEN----IID----------- 463
++KGL+ H K G + ++D+ ++ GR NEAE I+D
Sbjct: 123 LEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 464 ---------------------NMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIE- 501
N+ +PD+F SLL C G I K+ L
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 502 --PENPATYITLANIYANAG 519
P + +L ++Y G
Sbjct: 242 HCPSSATITGSLVDLYVKCG 261
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/632 (34%), Positives = 354/632 (56%), Gaps = 45/632 (7%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGI 103
+ Q+ + EA L + + ++ + + +++ R+++ + + +
Sbjct: 117 VKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDV 172
Query: 104 FISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR 163
S ++ + G + +A+ +FDEM +R++ +W TMI GY + ++ ARKLF+ MP +
Sbjct: 173 VASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK 232
Query: 164 DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEI 223
SW + + GY GR +A E F +M I C
Sbjct: 233 TEVSWTSMLLGYTLSGRIEDAEEFFEVM-----------------PMKPVIAC------- 268
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRR 283
+A++ +G+ G + +AR +FD M D+D +W MI G
Sbjct: 269 ----------------NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 284 EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSAL 343
E LF + GVRP+ + +L CA A+ G++VH +++R +D + S L
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVL 372
Query: 344 VDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQ 403
+ +Y KCG A VF++ D++ W S+I G+A +G + AL F + SGT P++
Sbjct: 373 MTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNK 432
Query: 404 ITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIID 463
+T + +L+AC++AG +++GLE F S++ K + T +HY+C +D+L R+G+ ++A +I+
Sbjct: 433 VTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIE 492
Query: 464 NMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAE 523
+M+IKPD +W +LLG C+ H ++LA+ AA LFE EP+N TY+ L++I A+ +W +
Sbjct: 493 SMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGD 552
Query: 524 EAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDT-SHPKIRDIHEFLGELSKKMKEEG 582
A VRK+M + K PG SWIE+ ++VH+F G +HP+ I L + ++E G
Sbjct: 553 VAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAG 612
Query: 583 YVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMK 642
Y PD + VLHDV+EE+K +L HSE+LAVA+G++ P G PI+V KNLR C DCH A+K
Sbjct: 613 YSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIK 672
Query: 643 YTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
SK+ +R+IILRD+NRFH F +G CSC+DYW
Sbjct: 673 LISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 201/438 (45%), Gaps = 42/438 (9%)
Query: 107 NRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHF 166
N ++ Y G +A++LFDEM +R++ SWN +++GY K + +AR +F+ MP R+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 167 SWNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHG 225
SW A + GY+ G EA +F RM +++E S + F GL I R ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF---GGLIDDGRIDKARKLYDM-- 166
Query: 226 YLVRAGLDLDEVVWSALLDLYGKC--GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRR 283
+ + +VV S + + G C G +DEAR IFD+M +++VV+WTTMI ++ R
Sbjct: 167 ------MPVKDVVASTNM-IGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 284 EEGFSLFRDLMGSGVRP--NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGS 341
+ LF V P E ++T +L +E M P A +
Sbjct: 220 DVARKLFE------VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKP-VIACN 269
Query: 342 ALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
A++ + + G A RVF+ + D +W +I + + G AL F + K G +P
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 402 DQITFVGVLSACTHAGLVDKGLE-YFHSIKEKHGLMHTADHY--ACVIDLLARSGRFNEA 458
+ + +LS C + G + + H ++ D Y + ++ + + G +A
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVR----CQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE----NPATYITLANI 514
+ + D S K D +W S++ G HG L + A E+ N T I +
Sbjct: 386 KLVFDRFSSK-DIIMWNSIISGYASHG---LGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 515 YANAGQWAEEAKVRKDME 532
+ AG+ E ++ + ME
Sbjct: 442 CSYAGKLEEGLEIFESME 459
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/611 (37%), Positives = 346/611 (56%), Gaps = 34/611 (5%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + A R G+++HAL I +F+ D+Y K RL
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCK-------TRL 158
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
D+ ARKLFDE+P R+ +WNA IS V+ GRPREA+
Sbjct: 159 RDD------------------------ARKLFDEIPERNLETWNAFISNSVTDGRPREAI 194
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
E F ++ + + N T + L A + L LG ++HG ++R+G D D V + L+D
Sbjct: 195 EAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF 253
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
YGKC + + IF +M K+ VSW +++ ++ E+ L+ V +++
Sbjct: 254 YGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 313
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+ VL ACA A LG+ +H + ++ + F GSALVD+Y KCG + + + F+++P
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 373
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLK--SGTKPDQITFVGVLSACTHAGLVDKGL 423
+LV+ SLIGG+A GQ D AL FE + G P+ +TFV +LSAC+ AG V+ G+
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
+ F S++ +G+ A+HY+C++D+L R+G A I M I+P +W +L CR+
Sbjct: 434 KIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRM 493
Query: 484 HGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
HG +L AA LF+++P++ ++ L+N +A AG+WAE VR++++ GI K G S
Sbjct: 494 HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYS 553
Query: 544 WIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNL 603
WI +K QVH F D SH ++I L +L +M+ GY PD L+D+EEE+K +
Sbjct: 554 WITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEV 613
Query: 604 FYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCF 663
+HSEKLA+AFG++S P PI++ KNLR C DCH+ K+ S V+R+II+RD+NRFH F
Sbjct: 614 SHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRF 673
Query: 664 EDGSCSCKDYW 674
+DG CSCKDYW
Sbjct: 674 KDGICSCKDYW 684
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 187/407 (45%), Gaps = 26/407 (6%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL-EMFRMMQKHES 196
N +I Y+KL E AR + P R+ SW + ISG +G AL E F M + E
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEM--RREG 103
Query: 197 SNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
N FT A A++ GK+IH V+ G LD V + D+Y K D+AR
Sbjct: 104 VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 163
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+FD++ ++++ +W I DGR E F + PN TF L AC+D
Sbjct: 164 KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWL 223
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
+LG ++HG ++R G+D + L+D Y KC + + +F ++ + VSW SL+
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVA 283
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKE---KH 433
+ QN + ++A + K + VLSAC AG+ GLE SI K
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMA--GLELGRSIHAHAVKA 339
Query: 434 GLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWA--SLLGGCRIHGNIELAK 491
+ T + ++D+ + G ++E D M P+K L SL+GG G +++A
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEM---PEKNLVTRNSLIGGYAHQGQVDMAL 396
Query: 492 RAANALF-EIEPE------NPATYITLANIYANAGQWAEEAKVRKDM 531
ALF E+ P N T+++L + + AG K+ M
Sbjct: 397 ----ALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 45/365 (12%)
Query: 36 TNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
T+ EAI A + +R+ P+ + + AC L G ++H L
Sbjct: 186 TDGRPREAIEAFIEFRRID---------GHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARK 155
S F + + N L+D Y KC + ++ +F EMG ++ SW +++A Y + E+A
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
L+ + + + ++ F +SS L+A A +
Sbjct: 297 LY--------------------------------LRSRKDIVETSDFMISSVLSACAGMA 324
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
L LG+ IH + V+A ++ V SAL+D+YGKCG ++++ FD+M +K++V+ ++I
Sbjct: 325 GLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIG 384
Query: 276 RCFEDGRREEGFSLFRDLM--GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV-G 332
G+ + +LF ++ G G PN TF +L AC+ A G ++ M G
Sbjct: 385 GYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYG 444
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFF 391
+PG+ S +VD+ + G + A ++P +P + W +L +G+P L
Sbjct: 445 IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAA 504
Query: 392 ELLLK 396
E L K
Sbjct: 505 ENLFK 509
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 308 VLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
+LK ++ LG+ VH +++ + P F + L+++YSK + + A V P
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 367 DLVSWTSLIGGFAQNGQPDRAL-HFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
++VSWTSLI G AQNG AL FFE + + G P+ TF A L G +
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFE-MRREGVVPNDFTFPCAFKAVASLRLPVTG-KQ 129
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
H++ K G + D+ ++ ++A + D +
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 169
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/527 (39%), Positives = 330/527 (62%), Gaps = 2/527 (0%)
Query: 150 LEQARKLFDEMPRR-DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGL 208
+ A K+F ++ + + F WN I GY G A ++R M+ + T +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 209 AAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV 268
A + +RLG+ IH ++R+G V ++LL LY CG + A +FD+M +KD+V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 269 SWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYM 328
+W ++I+ E+G+ EE +L+ ++ G++P+ +T +L ACA A LGK VH YM
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 329 MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
++VG + + L+DLY++CG + A +F+++ + VSWTSLI G A NG A+
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 389 HFFELLLKS-GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 447
F+ + + G P +ITFVG+L AC+H G+V +G EYF ++E++ + +H+ C++D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 448 LLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPAT 507
LLAR+G+ +A I +M ++P+ +W +LLG C +HG+ +LA+ A + ++EP +
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 508 YITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDI 567
Y+ L+N+YA+ +W++ K+RK M G+ K PG S +E+ +VH FL+GD SHP+ I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 568 HEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKV 627
+ L E++ +++ EGYVP + V DVEEE+KE + YHSEK+A+AF +ISTP +PI V
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 628 FKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
KNLR C DCH A+K SK+ R+I++RD +RFH F++GSCSC+DYW
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 163/330 (49%), Gaps = 45/330 (13%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P Y LI A + G +H++ S F I++ N LL LYA CG +A A
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY-- 176
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
K+FD+MP +D +WN+ I+G+ +G+P EAL
Sbjct: 177 -----------------------------KVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
++ M + + FT+ S L+A A I L LGK +H Y+++ GL + + LLDL
Sbjct: 208 ALYTEMNS-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS-GVRPNEYT 304
Y +CG ++EA+ +FD+MVDK+ VSWT++I +G +E LF+ + + G+ P E T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 305 FTGVLKACADHAAEHLGKEVHGY----MMRVGY--DPGSFAGSALVDLYSKCGNTKIASR 358
F G+L AC+ H G G+ MR Y +P +VDL ++ G K A
Sbjct: 327 FVGILYACS-----HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 359 VFNQIP-RPDLVSWTSLIGGFAQNGQPDRA 387
+P +P++V W +L+G +G D A
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 43 AINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
IN + + +EA+ L ++ +P +L++AC + AL G+RVH
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD 158
+ SN LLDLYA+CG + +A+ LFDEM D++ SW ++I G A G+ ++A +LF
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Query: 159 EMPRRD-----HFSWNAAISGYVSHGRPREALEMFRMMQ---KHESSNSNKFTLSSGLAA 210
M + ++ + G +E E FR M+ K E + + LA
Sbjct: 313 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
A + K+ + Y+ + + V+W LL G C
Sbjct: 373 AGQV------KKAYEYIKSMPMQPNVVIWRTLL---GAC 402
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 250/651 (38%), Positives = 367/651 (56%), Gaps = 20/651 (3%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
++ + A + ++ A L + +P Y+TLI+ R + +
Sbjct: 76 SYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 99 F-IPGIFISNRLLDLYAKCGSLADAQR---LFDEMGDRDLCSW--NTMIAGYAKLGWLEQ 152
F + G +S L A C D + F G D S N + Y+K G L +
Sbjct: 136 FEVDGFTLSG----LIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 153 ARKLFDEMPR-RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
A +F M RD SWN+ I Y H +AL +++ M + + FTL+S L A
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI-FKGFKIDMFTLASVLNAL 250
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLD---EARGIFDQMVDKDVV 268
++ L G++ HG L++AG + V S L+D Y KCG D ++ +F +++ D+V
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 269 SWTTMIH-RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
W TMI + EE FR + G RP++ +F V AC++ ++ K++HG
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 328 MMRVGYDPGSFA-GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
++ + +AL+ LY K GN + A VF+++P + VS+ +I G+AQ+G
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
AL ++ +L SG P++ITFV VLSAC H G VD+G EYF+++KE + A+HY+C+I
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPA 506
DLL R+G+ EAE ID M KP WA+LLG CR H N+ LA+RAAN L ++P
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550
Query: 507 TYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRD 566
Y+ LAN+YA+A +W E A VRK M + I KKPG SWIE+K++ HVF+ D SHP IR+
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610
Query: 567 IHEFLGELSKKMKEEGYVPDTNFVL---HDVEEEQKEQNLFYHSEKLAVAFGIISTPPGT 623
++E+L E+ KKMK+ GYV D + + + E +E L +HSEKLAVAFG++ST G
Sbjct: 611 VNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGE 670
Query: 624 PIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
+ V KNLR C DCH A+K+ S + R+II+RD+ RFHCF+DG CSC DYW
Sbjct: 671 ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 245/526 (46%), Gaps = 73/526 (13%)
Query: 69 RLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDE 128
+ + L+ V R L G+ +HAL S ++SN ++LY+KCG L+ A+ F
Sbjct: 9 KTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYS 68
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
+ ++ S+N ++ YAK + AR+LFDE+P+ D S+N ISGY A+ +F
Sbjct: 69 TEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF 128
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLR--LGKEIHGYLVRAGLDLDEVVWSALLDLY 246
+ M+K + FTL SGL AA C R L K++H + V G D V +A + Y
Sbjct: 129 KRMRK-LGFEVDGFTL-SGLIAAC---CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 247 GKCGSLDEARGIFDQMVD-KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
K G L EA +F M + +D VSW +MI + + +L+++++ G + + +T
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTL 243
Query: 306 TGVLKACADHAAEHL--GKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK---IASRVF 360
VL A + +HL G++ HG +++ G+ S GS L+D YSKCG + +VF
Sbjct: 244 ASVLNALT--SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 361 NQIPRPDLVSWTSLIGGFAQNGQ-PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLV 419
+I PDLV W ++I G++ N + + A+ F + + G +PD +FV V SAC++
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN---- 357
Query: 420 DKGLEYFHSIKEKHGLM---HTADHYACV----IDLLARSGRFNEAENIIDNM------- 465
L K+ HGL H + V I L +SG +A + D M
Sbjct: 358 ---LSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 466 ---------------------------SIKPDKFLWASLLGGCRIHGNIELAKRAANAL- 497
I P+K + ++L C G ++ + N +
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 498 --FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPG 541
F+IEPE Y + ++ AG+ E + I + KPG
Sbjct: 475 ETFKIEPE-AEHYSCMIDLLGRAGKLEEAERF-----IDAMPYKPG 514
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/535 (40%), Positives = 322/535 (60%), Gaps = 6/535 (1%)
Query: 141 IAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSN 200
I+ Y+K G ++ LF E + D ++NA I GY S+G +L +F+ E S
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK-----ELMLSG 317
Query: 201 KFTLSSGLAAAAAIPC-LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
SS L + + L L IHGY +++ V +AL +Y K ++ AR +F
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEH 319
D+ +K + SW MI ++G E+ SLFR++ S PN T T +L ACA A
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437
Query: 320 LGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFA 379
LGK VH + ++ + +AL+ +Y+KCG+ A R+F+ + + + V+W ++I G+
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 380 QNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTA 439
+GQ AL+ F +L SG P +TF+ VL AC+HAGLV +G E F+S+ ++G +
Sbjct: 498 LHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557
Query: 440 DHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE 499
HYAC++D+L R+G A I+ MSI+P +W +LLG CRIH + LA+ + LFE
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE 617
Query: 500 IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDT 559
++P+N ++ L+NI++ + + A VR+ + R + K PG + IEI HVF GD
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 560 SHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIIST 619
SHP++++I+E L +L KM+E GY P+T LHDVEEE++E + HSE+LA+AFG+I+T
Sbjct: 678 SHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIAT 737
Query: 620 PPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
PGT I++ KNLR C+DCHT K SKI +R I++RD+NRFH F+DG CSC DYW
Sbjct: 738 EPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 222/489 (45%), Gaps = 25/489 (5%)
Query: 56 AVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHA-LTKSSNFIP-------GIFISN 107
A D+ V RP L++ L+ + + V A L KS++ P I ++
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 108 RLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFS 167
D + G + Q + D D +L + ++ Y K +E ARK+FD MP +D
Sbjct: 131 GFRD--DRAGRVIHGQAVVDGC-DSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL 187
Query: 168 WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
WN ISGY + E++++FR + + + TL L A A + LRLG +IH
Sbjct: 188 WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLA 247
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGF 287
+ G + V + + LY KCG + +F + D+V++ MIH +G E
Sbjct: 248 TKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSL 307
Query: 288 SLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLY 347
SLF++LM SG R T ++ L +HGY ++ + + +AL +Y
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVY 364
Query: 348 SKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFV 407
SK + A ++F++ P L SW ++I G+ QNG + A+ F + KS P+ +T
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
+LSAC G + G ++ H + + +I + A+ G EA + D M+
Sbjct: 425 CILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT- 482
Query: 468 KPDKFLWASLLGGCRIHGNIELAKRAANALFE-----IEPENPATYITLANIYANAGQWA 522
K ++ W +++ G +HG + A N +E I P P T++ + ++AG
Sbjct: 483 KKNEVTWNTMISGYGLHGQ---GQEALNIFYEMLNSGITP-TPVTFLCVLYACSHAGLVK 538
Query: 523 EEAKVRKDM 531
E ++ M
Sbjct: 539 EGDEIFNSM 547
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 200/444 (45%), Gaps = 30/444 (6%)
Query: 107 NRLLDLYAKCGSLADAQRLFDEM---GDR-DLCSWNTMIAGYAKLGWLEQARKLFDEMPR 162
N LD + + S++ + ++ G R D+ + + LG + AR +F + R
Sbjct: 21 NTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR 80
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
D F +N + G+ + P +L +F ++K N T + ++AA+ R G+
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRV 140
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
IHG V G D + ++ S ++ +Y K +++AR +FD+M +KD + W TMI ++
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 283 REEGFSLFRDLMG-SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGS 341
E +FRDL+ S R + T +L A A+ LG ++H + G + +
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT 260
Query: 342 ALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
+ LYSKCG K+ S +F + +PD+V++ ++I G+ NG+ + +L F+ L+ SG +
Sbjct: 261 GFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL 320
Query: 402 DQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
T V ++ H L+ H K + H + L + NE E+
Sbjct: 321 RSSTLVSLVPVSGHLMLIYA----IHGYCLKSNFL---SHASVSTALTTVYSKLNEIESA 373
Query: 462 IDNMSIKPDKFL--WASLLGGCRIHGNIELAKRAANALF------EIEPENPATYITLAN 513
P+K L W +++ G +G E A +LF E P NP T + +
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTE----DAISLFREMQKSEFSP-NPVTITCILS 428
Query: 514 IYA-----NAGQWAEEAKVRKDME 532
A + G+W + D E
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFE 452
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/532 (39%), Positives = 327/532 (61%), Gaps = 2/532 (0%)
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
Y +LG + A K+F+EMP+ D W+ I+ + +G EA+++F M + N+FT
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFVVPNEFT 350
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
LSS L A C LG+++HG +V+ G DLD V +AL+D+Y KC +D A +F ++
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 264 DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE 323
K+ VSW T+I G + FS+FR+ + + V E TF+ L ACA A+ LG +
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ 470
Query: 324 VHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ 383
VHG ++ ++L+D+Y+KCG+ K A VFN++ D+ SW +LI G++ +G
Sbjct: 471 VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGL 530
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
+AL +++ KP+ +TF+GVLS C++AGL+D+G E F S+ HG+ +HY
Sbjct: 531 GRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT 590
Query: 444 CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE 503
C++ LL RSG+ ++A +I+ + +P +W ++L N E A+R+A + +I P+
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK 650
Query: 504 NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPK 563
+ ATY+ ++N+YA A QWA A +RK M+ G+ K+PG SWIE + VH F VG + HP
Sbjct: 651 DEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPD 710
Query: 564 IRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPG- 622
++ I+ L L+ K GYVPD N VL D+++E+K++ L+ HSE+LA+A+G++ P
Sbjct: 711 MKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSR 770
Query: 623 TPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
I + KNLR C DCH+AMK S IVQR +++RD NRFH F G CSC D+W
Sbjct: 771 NRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 197/414 (47%), Gaps = 21/414 (5%)
Query: 124 RLFDEMGDRDLCSW-----------------NTMIAGYAKLGWLEQARKLFDEMPRRDHF 166
+LF + ++C W +I Y+ G ++ AR +F+ + +D
Sbjct: 154 KLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIV 213
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGY 226
W +S YV +G ++L++ M + N +T + L A+ + K +HG
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQ 272
Query: 227 LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEG 286
+++ LD V LL LY + G + +A +F++M DVV W+ MI R ++G E
Sbjct: 273 ILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEA 332
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
LF + + V PNE+T + +L CA LG+++HG +++VG+D + +AL+D+
Sbjct: 333 VDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDV 392
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y+KC A ++F ++ + VSW ++I G+ G+ +A F L++ ++TF
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTF 452
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
L AC +D G++ H + K +ID+ A+ G A+++ + M
Sbjct: 453 SSALGACASLASMDLGVQ-VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE-NPATYITLANIYANAG 519
D W +L+ G HG A R + + + + + N T++ + + +NAG
Sbjct: 512 -TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAG 564
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 170/348 (48%), Gaps = 7/348 (2%)
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
DL + N ++ Y K G+ + A LFDEMP R++ S+ GY ++ + ++ +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLH 138
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
+ E N +S L ++ + +H +V+ G D + V +AL++ Y CGS+
Sbjct: 139 R-EGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
D AR +F+ ++ KD+V W ++ E+G E+ L + +G PN YTF LKA
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
A K VHG +++ Y G L+ LY++ G+ A +VFN++P+ D+V W+
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWS 317
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
+I F QNG + A+ F + ++ P++ T +L+ C G E H + K
Sbjct: 318 FMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG-EQLHGLVVK 376
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
G +ID+ A+ + + A + +S K ++ W +++ G
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVG 423
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 163/372 (43%), Gaps = 39/372 (10%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I CQ EAVDL + P+ S+++ C + G ++H L F
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF 379
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
I++SN L+D+YAKC + A +LF E+ ++ SWNT+I GY L
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL------------ 427
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
G +A MFR +++ S + + T SS L A A++ + L
Sbjct: 428 -------------------GEGGKAFSMFREALRNQVSVT-EVTFSSALGACASLASMDL 467
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G ++HG ++ V ++L+D+Y KCG + A+ +F++M DV SW +I
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSF 338
G + + + +PN TF GVL C++ G+E M+R G +P
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
+ +V L + G A ++ IP P ++ W +++ + A E +LK
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647
Query: 398 GTKPDQITFVGV 409
K D+ T+V V
Sbjct: 648 NPK-DEATYVLV 658
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 41/299 (13%)
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI--HRC 277
K IH +++ G LD + LL+ Y K G +A +FD+M +++ VS+ T+ + C
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC 127
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
++ L+ L G N + FT LK + +H ++++GYD +
Sbjct: 128 ------QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNA 181
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
F G+AL++ YS CG+ A VF I D+V W ++ + +NG + +L + +
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 398 GTKPDQITFVGVLSACTHAGLVD--KGLE-------YFHSIKEKHGLMHTADH------- 441
G P+ TF L A G D KG+ Y + GL+
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 442 --------------YACVIDLLARSGRFNEAENIIDNMS---IKPDKFLWASLLGGCRI 483
++ +I ++G NEA ++ M + P++F +S+L GC I
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI 360
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 323/538 (60%), Gaps = 2/538 (0%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N +A YAK G L A+++F + + SWNA I G+ PR +L+ M K
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGL 492
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
+ FT+ S L+A + + LRLGKE+HG+++R L+ D V+ ++L LY CG L +
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 552
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+FD M DK +VSW T+I ++G + +FR ++ G++ + V AC+ +
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 612
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
LG+E H Y ++ + +F +L+D+Y+K G+ +S+VFN + SW ++I G
Sbjct: 613 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 672
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+ +G A+ FE + ++G PD +TF+GVL+AC H+GL+ +GL Y +K GL
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 438 TADHYACVIDLLARSGRFNEAENII-DNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
HYACVID+L R+G+ ++A ++ + MS + D +W SLL CRIH N+E+ ++ A
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 497 LFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLV 556
LFE+EPE P Y+ L+N+YA G+W + KVR+ M + K G SWIE+ R+V F+V
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 852
Query: 557 GDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGI 616
G+ +I L K+ + GY PDT V HD+ EE+K + L HSEKLA+ +G+
Sbjct: 853 GERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGL 912
Query: 617 ISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
I T GT I+V+KNLR CVDCH A K SK+++R+I++RD+ RFH F++G CSC DYW
Sbjct: 913 IKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 183/414 (44%), Gaps = 40/414 (9%)
Query: 74 LIAACVRHRALEQGRRVHALTKSSNFIPGI-FISNRLLDLYAKCGSLADAQRLFDEMGDR 132
L+ A + + +E GR++H L S + + R++ +YA CGS D+
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDS---------- 139
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
R +FD + ++ F WNA IS Y + E LE F M
Sbjct: 140 ---------------------RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
+ FT + A A + + +G +HG +V+ GL D V +AL+ YG G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM---GSGV-RPNEYTFTGV 308
+A +FD M ++++VSW +MI ++G EE F L ++M G G P+ T V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
L CA LGK VHG+ +++ D +AL+D+YSKCG A +F ++
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSG--TKPDQITFVGVLSACTHAGLVDKGLEYF 426
VSW +++GGF+ G +L G K D++T + + C H + L+
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL-PSLKEL 417
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
H K ++ + A+ G + A+ + + K W +L+GG
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS-WNALIGG 470
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 210/519 (40%), Gaps = 77/519 (14%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P Y +I AC + G VH L + + +F+ N L+ Y G + D
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD---- 240
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
A +LFD MP R+ SWN+ I + +G E+
Sbjct: 241 ---------------------------ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 186 EMFRMMQKHESSNS---NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSAL 242
+ M + + + TL + L A + LGK +HG+ V+ LD + V+ +AL
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 243 LDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG--VRP 300
+D+Y KCG + A+ IF +K+VVSW TM+ +G F + R ++ G V+
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVF 360
+E T + C + KE+H Y ++ + +A V Y+KCG+ A RVF
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
Query: 361 NQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD 420
+ I + SW +LIGG AQ+ P +L + SG PD T +LSAC+ +
Sbjct: 454 HGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 513
Query: 421 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK------------ 468
G E H ++ L Y V+ L G + + D M K
Sbjct: 514 LGKE-VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 469 -----PDKFL-----------------WASLLGGCRIHGNIELAKRA-ANALFEIEPENP 505
PD+ L + G C + ++ L + A A AL + ++
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA 632
Query: 506 ATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
+L ++YA G + +KV G+ +K SW
Sbjct: 633 FIACSLIDMYAKNGSITQSSKV-----FNGLKEKSTASW 666
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 133/313 (42%), Gaps = 35/313 (11%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P +L++AC + ++L G+ VH + +F+ +L LY CG L Q
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ-- 551
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
LFD M + SWN I+GY+ +G P AL
Sbjct: 552 -----------------------------ALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+FR M + ++ A + +P LRLG+E H Y ++ L+ D + +L+D+
Sbjct: 583 GVFRQMVLY-GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM 641
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y K GS+ ++ +F+ + +K SW MI G +E LF ++ +G P++ TF
Sbjct: 642 YAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 701
Query: 306 TGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ-- 362
GVL AC H G M G P + ++D+ + G A RV +
Sbjct: 702 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 363 IPRPDLVSWTSLI 375
D+ W SL+
Sbjct: 762 SEEADVGIWKSLL 774
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/606 (38%), Positives = 357/606 (58%), Gaps = 35/606 (5%)
Query: 72 STLIAACVRHRALEQGRRVHA-LTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
S+LIAA ++E R +H + KS ++ G FI ++L+ Y + G A++LFDEM
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHG-FIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
+RDL SWN++I+GY+ G+L G+ E L RM
Sbjct: 94 ERDLVSWNSLISGYSGRGYL----------------------------GKCFEVLS--RM 123
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV-VWSALLDLYGKC 249
M N+ T S ++A G+ IHG +++ G+ L+EV V +A ++ YGK
Sbjct: 124 MISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV-LEEVKVVNAFINWYGKT 182
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
G L + +F+ + K++VSW TMI ++G E+G + F G P++ TF VL
Sbjct: 183 GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVL 242
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
++C D L + +HG +M G+ +AL+DLYSK G + +S VF++I PD +
Sbjct: 243 RSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM 302
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
+WT+++ +A +G A+ FEL++ G PD +TF +L+AC+H+GLV++G YF ++
Sbjct: 303 AWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETM 362
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
+++ + DHY+C++DLL RSG +A +I M ++P +W +LLG CR++ + +L
Sbjct: 363 SKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQL 422
Query: 490 AKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKR 549
+AA LFE+EP + Y+ L+NIY+ +G W + +++R M+ +G+V+ G S+IE
Sbjct: 423 GTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGN 482
Query: 550 QVHVFLVGDTSHPKIRDIHEFLGELSKKMKEE-GYVPDTNFVLHDVEEEQKEQNLFYHSE 608
++H F+VGD SHP+ I + L E+ KKMK E GY T FVLHDV E+ KE+ + HSE
Sbjct: 483 KIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSE 542
Query: 609 KLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSC 668
K+A+AFG++ P PI + KNLR C DCH K S I +R+II+RDS RFH F DGSC
Sbjct: 543 KIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSC 602
Query: 669 SCKDYW 674
SC DYW
Sbjct: 603 SCSDYW 608
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 34/314 (10%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP+ + ++I+ACV + E+GR +H L + + + N ++ Y K G L + +
Sbjct: 131 RPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCK 190
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
LF+++ ++L SWNTMI + + G E+ F+ M RR V H P +A
Sbjct: 191 LFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRR------------VGH-EPDQA 236
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
T + L + + +RL + IHG ++ G ++ + +ALLD
Sbjct: 237 ------------------TFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLD 278
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
LY K G L+++ +F ++ D ++WT M+ G + F ++ G+ P+ T
Sbjct: 279 LYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338
Query: 305 FTGVLKACADHAAEHLGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
FT +L AC+ GK M R DP S +VDL + G + A + ++
Sbjct: 339 FTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEM 398
Query: 364 P-RPDLVSWTSLIG 376
P P W +L+G
Sbjct: 399 PMEPSSGVWGALLG 412
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/598 (36%), Positives = 345/598 (57%), Gaps = 35/598 (5%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+++ +AAC E+GR +H L + G+F N+++
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLV----VVSGLFY-NQIIG------------------- 383
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
N +++ Y K+G + ++R++ +MPRRD +WNA I GY P +AL F+
Sbjct: 384 -------NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 436
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIP--CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
M + E +SN T+ S L+A +P L GK +H Y+V AG + DE V ++L+ +Y K
Sbjct: 437 M-RVEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 494
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
CG L ++ +F+ + ++++++W M+ G EE L + GV ++++F+
Sbjct: 495 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 554
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
L A A A G+++HG +++G++ SF +A D+YSKCG ++ L
Sbjct: 555 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 614
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
SW LI ++G + F +L+ G KP +TFV +L+AC+H GLVDKGL Y+
Sbjct: 615 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 674
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
I GL +H CVIDLL RSGR EAE I M +KP+ +W SLL C+IHGN++
Sbjct: 675 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 734
Query: 489 LAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIK 548
++AA L ++EPE+ + Y+ +N++A G+W + VRK M + I KK SW+++K
Sbjct: 735 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 794
Query: 549 RQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSE 608
+V F +GD +HP+ +I+ L ++ K +KE GYV DT+ L D +EEQKE NL+ HSE
Sbjct: 795 DKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSE 854
Query: 609 KLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDG 666
+LA+A+ ++STP G+ +++FKNLR C DCH+ K+ S+++ R+I+LRD RFH FE G
Sbjct: 855 RLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 182/353 (51%), Gaps = 6/353 (1%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQK-HES 196
N++I+ +G ++ A +FD+M RD SWN+ + Y +G E+ +F +M++ H+
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 197 SNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
NS T+S+ L+ + + G+ IHG +V+ G D V + LL +Y G EA
Sbjct: 242 VNST--TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+F QM KD++SW +++ DGR + L ++ SG N TFT L AC
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
G+ +HG ++ G G+ALV +Y K G + RV Q+PR D+V+W +LIG
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIG 419
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAG-LVDKGLEYFHSIKEKHGL 435
G+A++ PD+AL F+ + G + IT V VLSAC G L+++G + H+ G
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG-KPLHAYIVSAGF 478
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
+I + A+ G + ++++ + + + + W ++L HG+ E
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 530
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 218/454 (48%), Gaps = 39/454 (8%)
Query: 65 RPSPRLYSTLIAACVRHRAL-EQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQ 123
+PS + ++L+ AC R ++ +G +VH S + +++S +L LY G ++
Sbjct: 38 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVS--- 94
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
CS RK+F+EMP R+ SW + + GY G P E
Sbjct: 95 -----------CS-----------------RKVFEEMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
+++++ M + E N+ ++S +++ + LG++I G +V++GL+ V ++L+
Sbjct: 127 VIDIYKGM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLI 185
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
+ G G++D A IFDQM ++D +SW ++ ++G EE F +F + N
Sbjct: 186 SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST 245
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
T + +L + G+ +HG ++++G+D + L+ +Y+ G + A+ VF Q+
Sbjct: 246 TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 305
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
P DL+SW SL+ F +G+ AL ++ SG + +TF L+AC +KG
Sbjct: 306 PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG- 364
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
H + GL + ++ + + G +E+ ++ M + D W +L+GG
Sbjct: 365 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGG--- 420
Query: 484 HGNIELAKRAANALFEIEPENPAT-YITLANIYA 516
+ E +A A + E ++ YIT+ ++ +
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 454
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 10/323 (3%)
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
MP R+ SWN +SG V G E +E FR M S+ S A + R
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G ++HG++ ++GL D V +A+L LYG G + +R +F++M D++VVSWT+++ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
G EE +++ + G GV NE + + V+ +C E LG+++ G +++ G +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
++L+ + GN A+ +F+Q+ D +SW S+ +AQNG + + F L+ +
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR----SGRF 455
+ + T +LS H G H + K G D CV + L R +GR
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGF----DSVVCVCNTLLRMYAGAGRS 295
Query: 456 NEAENIIDNMSIKPDKFLWASLL 478
EA + M K D W SL+
Sbjct: 296 VEANLVFKQMPTK-DLISWNSLM 317
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/565 (38%), Positives = 328/565 (58%), Gaps = 38/565 (6%)
Query: 143 GYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKF 202
YA G + + LF + D F + AAI+ +G +A ++ + E N N+F
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEI-NPNEF 131
Query: 203 TLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK-------------- 248
T SS L + + + GK IH ++++ GL +D V + L+D+Y K
Sbjct: 132 TFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 249 -------------C----GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFR 291
C G+++ AR +FD M ++D+VSW MI + G + LF+
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 292 DLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKC 350
L+ G +P+E T L AC+ A G+ +H ++ + L+D+YSKC
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 351 GNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGV 409
G+ + A VFN PR D+V+W ++I G+A +G AL F E+ +G +P ITF+G
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 410 LSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKP 469
L AC HAGLV++G+ F S+ +++G+ +HY C++ LL R+G+ A I NM++
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 470 DKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRK 529
D LW+S+LG C++HG+ L K A L + +N Y+ L+NIYA+ G + AKVR
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 487
Query: 530 DMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNF 589
M+ +GIVK+PG S IEI+ +VH F GD H K ++I+ L ++S+++K GYVP+TN
Sbjct: 488 LMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNT 547
Query: 590 VLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQ 649
VL D+EE +KEQ+L HSE+LA+A+G+IST PG+P+K+FKNLR C DCHT K SKI
Sbjct: 548 VLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITG 607
Query: 650 RKIILRDSNRFHCFEDGSCSCKDYW 674
RKI++RD NRFH F DGSCSC D+W
Sbjct: 608 RKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 189/385 (49%), Gaps = 20/385 (5%)
Query: 8 KIRRAFSSSSQFRHDXXXXXXXX-----XXXAKTNNNFEEAINALCQQKRLKEAVDLLHH 62
K+ RA++S + RH A N +IN L Q L V LL
Sbjct: 69 KLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINT---ASINGLKDQAFLL-YVQLLSS 124
Query: 63 VDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGI--FISNRLLDLYAKCGSLA 120
P+ +S+L+ +C + + G+ +H T F GI +++ L+D+YAK G +
Sbjct: 125 EINPNEFTFSSLLKSC----STKSGKLIH--THVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 121 DAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGR 180
AQ++FD M +R L S MI YAK G +E AR LFD M RD SWN I GY HG
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 181 PREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWS 240
P +AL +F+ + ++ T+ + L+A + I L G+ IH ++ + + L+ V +
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCT 298
Query: 241 ALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG-SGVR 299
L+D+Y KCGSL+EA +F+ KD+V+W MI G ++ LF ++ G +G++
Sbjct: 299 GLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQ 358
Query: 300 PNEYTFTGVLKACADHAAEHLGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIA-S 357
P + TF G L+ACA + G + M G P LV L + G K A
Sbjct: 359 PTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYE 418
Query: 358 RVFNQIPRPDLVSWTSLIGGFAQNG 382
+ N D V W+S++G +G
Sbjct: 419 TIKNMNMDADSVLWSSVLGSCKLHG 443
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/642 (34%), Positives = 348/642 (54%), Gaps = 65/642 (10%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + LI A +L G+ +H + S +F++N L+ Y CG L A ++
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F + ++D+ SWN+MI G+ + G P +AL
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKG-------------------------------SPDKAL 217
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
E+F+ M+ E ++ T+ L+A A I L G+++ Y+ ++++ + +A+LD+
Sbjct: 218 ELFKKMES-EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTM-------------------------------I 274
Y KCGS+++A+ +FD M +KD V+WTTM I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 275 HRCFEDGRREEGFSLFRDL-MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
++G+ E +F +L + ++ N+ T L ACA A LG+ +H Y+ + G
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL 393
SAL+ +YSKCG+ + + VFN + + D+ W+++IGG A +G + A+ F
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 394 LLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
+ ++ KP+ +TF V AC+H GLVD+ FH ++ +G++ HYAC++D+L RSG
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 454 RFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLAN 513
+A I+ M I P +W +LLG C+IH N+ LA+ A L E+EP N ++ L+N
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Query: 514 IYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGE 573
IYA G+W +++RK M + G+ K+PG S IEI +H FL GD +HP ++ L E
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636
Query: 574 LSKKMKEEGYVPDTNFVLHDVEEEQ-KEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLR 632
+ +K+K GY P+ + VL +EEE+ KEQ+L HSEKLA+ +G+IST I+V KNLR
Sbjct: 637 VMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLR 696
Query: 633 TCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
C DCH+ K S++ R+II+RD RFH F +G CSC D+W
Sbjct: 697 VCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 203/408 (49%), Gaps = 38/408 (9%)
Query: 141 IAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSN 200
+A + LE ARK+FDE+P+ + F+WN I Y S P ++ F M N
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 201 KFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFD 260
K+T + AAA + L LG+ +HG V++ + D V ++L+ Y CG LD A +F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 261 QMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHL 320
+ +KDVVSW +MI+ + G ++ LF+ + V+ + T GVL ACA
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 321 GKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVF-------------------- 360
G++V Y+ + +A++D+Y+KCG+ + A R+F
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 361 -----------NQIPRPDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVG 408
N +P+ D+V+W +LI + QNG+P+ AL F EL L+ K +QIT V
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK 468
LSAC G ++ G + HS +KHG+ + +I + ++ G ++ + +++ K
Sbjct: 371 TLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-K 428
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPEN-PATYITLANIY 515
D F+W++++GG +HG A + ++++ N +T N++
Sbjct: 429 RDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVF 473
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 184/343 (53%), Gaps = 12/343 (3%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
IN Q+ +A++L ++ + S +++AC + R LE GR+V + + +
Sbjct: 204 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRV 263
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ ++N +LD+Y KCGS+ DA+RLFD M ++D +W TM+ GYA E AR++ +
Sbjct: 264 NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNS 323
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
MP++D +WNA IS Y +G+P EAL +F +Q ++ N+ TL S L+A A + L L
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G+ IH Y+ + G+ ++ V SAL+ +Y KCG L+++R +F+ + +DV W+ MI
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA----AEHLGKEVHGYMMRVGYDP 335
G E +F + + V+PN TFT V AC+ AE L H G P
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL---FHQMESNYGIVP 500
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS-WTSLIGG 377
+ +VD+ + G + A + +P P S W +L+G
Sbjct: 501 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/622 (34%), Positives = 358/622 (57%), Gaps = 16/622 (2%)
Query: 64 DRPSPRLY--STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLAD 121
D P P+++ + +I R+ + +++ + + P F LL C L+
Sbjct: 78 DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK---ACSGLSH 134
Query: 122 AQ-------RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD--EMPRRDHFSWNAAI 172
Q ++F D D+ N +IA YAK L AR +F+ +P R SW A +
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 173 SGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL 232
S Y +G P EALE+F M+K + + L S L A + L+ G+ IH +V+ GL
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDV-KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 233 DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
+++ + +L +Y KCG + A+ +FD+M +++ W MI ++G E +F +
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
++ VRP+ + T + ACA + + ++ Y+ R Y F SAL+D+++KCG+
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 353 TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
+ A VF++ D+V W+++I G+ +G+ A+ + + + G P+ +TF+G+L A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 413 CTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKF 472
C H+G+V +G +F+ + + H + HYACVIDLL R+G ++A +I M ++P
Sbjct: 434 CNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 473 LWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDME 532
+W +LL C+ H ++EL + AA LF I+P N Y+ L+N+YA A W A+VR M+
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMK 552
Query: 533 IRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLH 592
+G+ K G SW+E++ ++ F VGD SHP+ +I + + ++KE G+V + + LH
Sbjct: 553 EKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLH 612
Query: 593 DVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKI 652
D+ +E+ E+ L HSE++A+A+G+ISTP GTP+++ KNLR CV+CH A K SK+V R+I
Sbjct: 613 DLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREI 672
Query: 653 ILRDSNRFHCFEDGSCSCKDYW 674
++RD+NRFH F+DG CSC DYW
Sbjct: 673 VVRDTNRFHHFKDGVCSCGDYW 694
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 173/351 (49%), Gaps = 11/351 (3%)
Query: 140 MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS 199
+I + G + AR++FD++PR F WNA I GY + ++AL M+ MQ S
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS-P 117
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
+ FT L A + + L++G+ +H + R G D D V + L+ LY KC L AR +F
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 260 D--QMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+ + ++ +VSWT ++ ++G E +F + V+P+ VL A
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
G+ +H ++++G + +L +Y+KCG A +F+++ P+L+ W ++I G
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+A+NG A+ F ++ +PD I+ +SAC G LE S+ E G
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG----SLEQARSMYEYVGRSD 353
Query: 438 TADHY---ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
D + +ID+ A+ G A + D ++ D +W++++ G +HG
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDR-TLDRDVVVWSAMIVGYGLHG 403
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 130/262 (49%), Gaps = 4/262 (1%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
K+IH L+ GL + + L+ G + AR +FD + + W +I +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
++ ++ ++ + V P+ +TF +LKAC+ + +G+ VH + R+G+D F
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 341 SALVDLYSKCGNTKIASRVFNQIPRPD--LVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
+ L+ LY+KC A VF +P P+ +VSWT+++ +AQNG+P AL F + K
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
KPD + V VL+A T + +G H+ K GL D + + A+ G+ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQG-RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 459 ENIIDNMSIKPDKFLWASLLGG 480
+ + D M P+ LW +++ G
Sbjct: 277 KILFDKMK-SPNLILWNAMISG 297
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/610 (35%), Positives = 354/610 (58%), Gaps = 10/610 (1%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR-----L 125
+++LIA ++HR ++ ++ L ++N +P + + + ++ +AQR +
Sbjct: 133 WNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAV 192
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
+ ++ + ++ Y K G +A+ + D + +D A I GY G EA+
Sbjct: 193 ILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAV 252
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+ F+ M E N++T +S L + + + GK IHG +V++G + ++LL +
Sbjct: 253 KAFQSMLV-EKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTM 311
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y +C +D++ +F + + VSWT++I ++GR E FR +M ++PN +T
Sbjct: 312 YLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTL 371
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+ L+ C++ A G+++HG + + G+D +AGS L+DLY KCG + +A VF+ +
Sbjct: 372 SSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSE 431
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
D++S ++I +AQNG AL FE ++ G +P+ +T + VL AC ++ LV++G E
Sbjct: 432 VDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCEL 491
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
F S + K +M T DHYAC++DLL R+GR EAE + + I PD LW +LL C++H
Sbjct: 492 FDSFR-KDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHR 549
Query: 486 NIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
+E+A+R + EIEP + T I ++N+YA+ G+W +++ M+ + K P SW+
Sbjct: 550 KVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWV 609
Query: 546 EIKRQVHVFLVGDT-SHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLF 604
EI ++ H F+ GD SHP I E L EL KK K+ GYV D + V D+EE KE++L
Sbjct: 610 EINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLH 669
Query: 605 YHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFE 664
HSEKLA+AF + G+ I++ KNLR CVDCH+ +K S++++R+II RDS RFH F
Sbjct: 670 QHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFR 728
Query: 665 DGSCSCKDYW 674
DGSCSC DYW
Sbjct: 729 DGSCSCGDYW 738
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 198/399 (49%), Gaps = 39/399 (9%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+S L+ C+ R++ + + A S F P ++L+D KCG +
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDI----------- 115
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
+ AR++FD M R +WN+ I+ + H R +EA+EM+R+
Sbjct: 116 --------------------DYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRL 155
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV-VWSALLDLYGKC 249
M + + +++TLSS A + + + + HG V GL++ V V SAL+D+Y K
Sbjct: 156 MITN-NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF 214
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
G EA+ + D++ +KDVV T +I + G E F+ ++ V+PNEYT+ VL
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
+C + GK +HG M++ G++ + ++L+ +Y +C + RVF I P+ V
Sbjct: 275 ISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV 334
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
SWTSLI G QNG+ + AL F +++ KP+ T L C++ + ++G + H I
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ-IHGI 393
Query: 430 KEKHGLMHTADHYA--CVIDLLARSGRFNEAENIIDNMS 466
K+G D YA +IDL + G + A + D +S
Sbjct: 394 VTKYGF--DRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 32/313 (10%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P+ Y++++ +C + + G+ +H L S F + LL +Y +C + D+ R
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+F + + SW ++I SG V +GR A
Sbjct: 324 VFKCIEYPNQVSWTSLI-------------------------------SGLVQNGREEMA 352
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L FR M + +S N FTLSS L + + G++IHG + + G D D+ S L+D
Sbjct: 353 LIEFRKMMR-DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLID 411
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
LYGKCG D AR +FD + + DV+S TMI+ ++G E LF ++ G++PN+ T
Sbjct: 412 LYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVT 471
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
VL AC + G E+ + + + +VDL + G + A + ++
Sbjct: 472 VLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVI 531
Query: 365 RPDLVSWTSLIGG 377
PDLV W +L+
Sbjct: 532 NPDLVLWRTLLSA 544
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 143/271 (52%), Gaps = 4/271 (1%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
K I +++++G E+ S L+D KCG +D AR +FD M ++ +V+W ++I +
Sbjct: 85 KTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS-FA 339
R +E ++R ++ + V P+EYT + V KA +D + E + HG + +G + + F
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
GSALVD+Y K G T+ A V +++ D+V T+LI G++Q G+ A+ F+ +L
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
+P++ T+ VL +C + + G + H + K G ++ + R +++
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 322
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
+ + P++ W SL+ G +G E+A
Sbjct: 323 RVFKCIEY-PNQVSWTSLISGLVQNGREEMA 352
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 36/238 (15%)
Query: 44 INALCQQKR----LKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ L Q R L E ++ +P+ S+ + C E+GR++H + F
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF 399
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ + L+DLY KCG A+ +FD + + D+ S NTMI YA+
Sbjct: 400 DRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQ------------- 446
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
+G REAL++F M + N T+ S L A +
Sbjct: 447 ------------------NGFGREALDLFERM-INLGLQPNDVTVLSVLLACNNSRLVEE 487
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
G E+ + + L ++ ++DL G+ G L+EA + ++++ D+V W T++ C
Sbjct: 488 GCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/597 (36%), Positives = 348/597 (58%), Gaps = 28/597 (4%)
Query: 90 VHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGW 149
VH L++S+N +N L L K G +D + N ++ Y KL
Sbjct: 36 VHKLSESTNAA----FTNLLHTLTLKLGFASDTFTV------------NHLVISYVKLKE 79
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLA 209
+ ARKLFDEM + SW + ISGY G+P+ AL MF+ M + N++T +S
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD--KDV 267
A +A+ R+GK IH L +GL + VV S+L+D+YGKC ++ AR +FD M+ ++V
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMG--SGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
VSWT+MI ++ R E LFR + R N++ V+ AC+ GK H
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPD 385
G + R GY+ + ++L+D+Y+KCG+ A ++F +I ++S+TS+I A++G +
Sbjct: 260 GLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGE 319
Query: 386 RALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACV 445
A+ F+ ++ P+ +T +GVL AC+H+GLV++GLEY + EK+G++ + HY CV
Sbjct: 320 AAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCV 379
Query: 446 IDLLARSGRFNEAENIIDNMSIKPDK--FLWASLLGGCRIHGNIELAKRAANALFEIEPE 503
+D+L R GR +EA + + + ++ LW +LL R+HG +E+ A+ L + +
Sbjct: 380 VDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ 439
Query: 504 NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPK 563
+ YI L+N YA +G W + +R +M+ G VK+ SWIE K V+VF GD S +
Sbjct: 440 VTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDE 499
Query: 564 IRDIHEFLGELSKKMKEEGY------VPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGII 617
+I FL +L K+MKE G+ + ++ V DV+EE K++ + H E+LA+A+G++
Sbjct: 500 SGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLL 559
Query: 618 STPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
P G+ I++ NLR C DCH A K S+IV+R+I++RD NRFHCF++GSC+C+DYW
Sbjct: 560 HLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 38/297 (12%)
Query: 62 HVDRPSP---RLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGS 118
H DRP P ++++ AC G+ +HA + S I +S+ L+D+Y KC
Sbjct: 122 HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND 181
Query: 119 LADAQRLFDEM--GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYV 176
+ A+R+FD M R++ SW +MI YA+
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQ------------------------------ 211
Query: 177 SHGRPREALEMFRMMQKHESSN-SNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLD 235
+ R EA+E+FR +S+ +N+F L+S ++A +++ L+ GK HG + R G + +
Sbjct: 212 -NARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESN 270
Query: 236 EVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG 295
VV ++LLD+Y KCGSL A IF ++ V+S+T+MI + G E LF +++
Sbjct: 271 TVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVA 330
Query: 296 SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCG 351
+ PN T GVL AC+ + G E M + G P S + +VD+ + G
Sbjct: 331 GRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFG 387
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 26/231 (11%)
Query: 44 INALCQQKRLKEAVDLLHHV------DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSS 97
I A Q R EA++L DR + + +++I+AC L+ G+ H L
Sbjct: 206 ITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRG 265
Query: 98 NFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
+ ++ LLD+YAKCGSL+ A+++F + + S+ +MI AK G E A KLF
Sbjct: 266 GYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLF 325
Query: 158 DEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHES--SNSNKFTLSSGLAAA 211
DEM ++ + + G E LE +M + +S +T +
Sbjct: 326 DEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLG- 384
Query: 212 AAIPCLRLGKEIHGY----LVRAGLDLDEVVWSALLD---LYGKCGSLDEA 255
R G+ Y + G + ++W ALL L+G+ + EA
Sbjct: 385 ------RFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEA 429
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/638 (34%), Positives = 358/638 (56%), Gaps = 40/638 (6%)
Query: 46 ALCQQKRLKEAVDLLHHVDRP-----SPRLYSTLIAACVRHRALEQGRRVHALTKSSNFI 100
L + +L EAV L+ + +P Y+ L+ AC+ ++L G ++ +L ++ +
Sbjct: 104 GLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSL 163
Query: 101 ---PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
P + ++L+ L++ C L A+++FD++ D L +
Sbjct: 164 RHNPKLL--SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKV------------------ 203
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
W A GY +G PR+AL ++ M N F++S L A + L
Sbjct: 204 ----------WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGN-FSISVALKACVDLKDL 252
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
R+G+ IH +V+ +D+VV++ LL LY + G D+AR +FD M +++VV+W ++I
Sbjct: 253 RVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVL 312
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
+ R E F+LFR + + + T T +L AC+ AA GKE+H +++ P
Sbjct: 313 SKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDV 372
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
++L+D+Y KCG + + RVF+ + DL SW ++ +A NG + ++ FE +++S
Sbjct: 373 PLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIES 432
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G PD ITFV +LS C+ GL + GL F +K + + +HYAC++D+L R+G+ E
Sbjct: 433 GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKE 492
Query: 458 AENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYAN 517
A +I+ M KP +W SLL CR+HGN+ + + AA LF +EP NP Y+ ++NIYA+
Sbjct: 493 AVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYAD 552
Query: 518 AGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIH-EFLGELSK 576
A W K+R+ M+ RG+ K+ G SW+++K ++ +F+ G + D + + EL +
Sbjct: 553 AKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQE 612
Query: 577 KMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVD 636
+++ GY P+T+ VLHDV+EE K + HSE+LA + +I T G PI++ KNLR C D
Sbjct: 613 AIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCAD 672
Query: 637 CHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
CH+ MK S++ +R I+LRD+ RFH F DG CSCKDYW
Sbjct: 673 CHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 44 INALCQQKRLKEAVDLLHHVDRP----SPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ L ++ R+ E +L + S +T++ AC R AL G+ +HA S
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
P + + N L+D+Y KCG + ++R+FD M +DL SWN M+ YA G +E+ LF+
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 160 MPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
M D ++ A +SG G L +F M+ +F +S L
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK-------TEFRVSPALEH----- 476
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS-WTTMI 274
++ L+D+ G+ G + EA + + M K S W +++
Sbjct: 477 -----------------------YACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLL 513
Query: 275 HRC 277
+ C
Sbjct: 514 NSC 516
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/540 (38%), Positives = 322/540 (59%), Gaps = 11/540 (2%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFS--WNAAISGYVSHGRPREALEMFRMMQKHE 195
+I+ Y K G + ARK+F+E P+ S +NA ISGY ++ + +A MFR M++
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 196 SSNSNKFTLSSGLAAAAAIP-CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDE 254
S + L GL +P L LG+ +HG V+ GLD + V ++ + +Y KCGS++
Sbjct: 152 VSVDSVTML--GLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEA 209
Query: 255 ARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACAD 314
R +FD+M K +++W +I ++G + L+ + SGV P+ +T VL +CA
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 315 HAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSL 374
A+ +G EV + G+ P F +A + +Y++CGN A VF+ +P LVSWT++
Sbjct: 270 LGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 375 IGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
IG + +G + L F+ ++K G +PD FV VLSAC+H+GL DKGLE F ++K ++
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Query: 435 LMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAA 494
L +HY+C++DLL R+GR +EA I++M ++PD +W +LLG C+IH N+++A+ A
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 495 NALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVF 554
+ E EP N Y+ ++NIY+++ ++R M R KKPG S++E K +VH+F
Sbjct: 450 AKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLF 509
Query: 555 LVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAF 614
L GD SH + ++H L EL + E D + E+ HSE+LA+AF
Sbjct: 510 LAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD------RGEEVSSTTREHSERLAIAF 563
Query: 615 GIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
GI+++ PGT I V KNLR C DCH +K SKIV R+ ++RD++RFH F+DG CSCKDYW
Sbjct: 564 GILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 157/325 (48%), Gaps = 5/325 (1%)
Query: 168 WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
WN + E++ ++R M + SS + F+ L + A++ G+++H ++
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSS-PDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ--MVDKDVVSWTTMIHRCFEDGRREE 285
+ G + + V +AL+ +Y KCG + +AR +F++ + V + +I + + +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 286 GFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVD 345
+FR + +GV + T G++ C LG+ +HG ++ G D ++ +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 346 LYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
+Y KCG+ + R+F+++P L++W ++I G++QNG L +E + SG PD T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
V VLS+C H G G E + E +G + I + AR G +A + D M
Sbjct: 260 LVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 466 SIKPDKFLWASLLGGCRIHGNIELA 490
+K W +++G +HG E+
Sbjct: 319 PVK-SLVSWTAMIGCYGMHGMGEIG 342
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 36/340 (10%)
Query: 74 LIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRD 133
L+ C L GR +H + + N + +Y KCGS+ +RLFDEM +
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG 221
Query: 134 LCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQK 193
L +WN +I+GY++ G +L+++M K
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQM--------------------------------K 249
Query: 194 HESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLD 253
+ FTL S L++ A + ++G E+ + G + V +A + +Y +CG+L
Sbjct: 250 SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLA 309
Query: 254 EARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACA 313
+AR +FD M K +VSWT MI G E G LF D++ G+RP+ F VL AC+
Sbjct: 310 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 314 DHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSW 371
G E+ M R +PG S LVDL + G A +P PD W
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 372 TSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLS 411
+L+G + D A F +++ +P+ I + ++S
Sbjct: 430 GALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMS 467
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 17/239 (7%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P P +++++C A + G V L +S+ F+P +F+SN + +YA+CG+LA A+ +
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRP 181
FD M + L SW MI Y G E LFD+M +R D + +S G
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 182 REALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL--RLGK--EIHGYLVRAGLDLDEV 237
+ LE+FR M++ ++ L G + + L R G+ E ++ ++ D
Sbjct: 375 DKGLELFRAMKR-------EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGA 427
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMV--DKDVVSWTTMIHRCFEDGRREEGFSLFRDLM 294
VW ALL ++D A F +++ + + + + ++ + D + +EG R +M
Sbjct: 428 VWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMM 486
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/459 (41%), Positives = 303/459 (66%), Gaps = 1/459 (0%)
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
+RLG+ IH ++R+G V ++LL LY CG + A +FD+M +KD+V+W ++I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
E+G+ EE +L+ ++ G++P+ +T +L ACA A LGK VH YM++VG
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
+ + L+DLY++CG + A +F+++ + VSWTSLI G A NG A+ F+ +
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 397 S-GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+ G P +ITFVG+L AC+H G+V +G EYF ++E++ + +H+ C++DLLAR+G+
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 456 NEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIY 515
+A I +M ++P+ +W +LLG C +HG+ +LA+ A + ++EP + Y+ L+N+Y
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 516 ANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELS 575
A+ +W++ K+RK M G+ K PG S +E+ +VH FL+GD SHP+ I+ L E++
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363
Query: 576 KKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCV 635
+++ EGYVP + V DVEEE+KE + YHSEK+A+AF +ISTP +PI V KNLR C
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423
Query: 636 DCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
DCH A+K SK+ R+I++RD +RFH F++GSCSC+DYW
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 45/309 (14%)
Query: 87 GRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAK 146
G +H++ S F I++ N LL LYA CG +A A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY----------------------- 43
Query: 147 LGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
K+FD+MP +D +WN+ I+G+ +G+P EAL ++ M + + FT+ S
Sbjct: 44 --------KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS-KGIKPDGFTIVS 94
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
L+A A I L LGK +H Y+++ GL + + LLDLY +CG ++EA+ +FD+MVDK+
Sbjct: 95 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 154
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGS-GVRPNEYTFTGVLKACADHAAEHLGKEVH 325
VSWT++I +G +E LF+ + + G+ P E TF G+L AC+ H G
Sbjct: 155 SVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS-----HCGMVKE 209
Query: 326 GY----MMRVGY--DPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGF 378
G+ MR Y +P +VDL ++ G K A +P +P++V W +L+G
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 269
Query: 379 AQNGQPDRA 387
+G D A
Sbjct: 270 TVHGDSDLA 278
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 43 AINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
IN + + +EA+ L ++ +P +L++AC + AL G+RVH
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD 158
+ SN LLDLYA+CG + +A+ LFDEM D++ SW ++I G A G+ ++A +LF
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 159 EMPRRD-----HFSWNAAISGYVSHGRPREALEMFRMMQ---KHESSNSNKFTLSSGLAA 210
M + ++ + G +E E FR M+ K E + + LA
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
A + K+ + Y+ + + V+W LL G C
Sbjct: 240 AGQV------KKAYEYIKSMPMQPNVVIWRTLL---GAC 269
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 361/640 (56%), Gaps = 41/640 (6%)
Query: 44 INALCQQKRLKEAVDLLHHVD-----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
I L R +EA +L ++ + Y L+ AC+R +++ +RV+ S+
Sbjct: 94 IEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNG 153
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD 158
F P ++ NR+L ++ KCG + DA R+LFD
Sbjct: 154 FEPEQYMMNRILLMHVKCGMIIDA-------------------------------RRLFD 182
Query: 159 EMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
E+P R+ +S+ + ISG+V+ G EA E+F+MM + E S+ T + L A+A + +
Sbjct: 183 EIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWE-ELSDCETHTFAVMLRASAGLGSIY 241
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
+GK++H ++ G+ + V L+D+Y KCG +++AR F+ M +K V+W +I
Sbjct: 242 VGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYA 301
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
G EE L D+ SGV +++T + +++ A L K+ H ++R G++
Sbjct: 302 LHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIV 361
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
A +ALVD YSK G A VF+++PR +++SW +L+GG+A +G+ A+ FE ++ +
Sbjct: 362 ANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN 421
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
P+ +TF+ VLSAC ++GL ++G E F S+ E HG+ A HYAC+I+LL R G +EA
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA 481
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANA 518
I +K +WA+LL CR+ N+EL + A L+ + PE Y+ + N+Y +
Sbjct: 482 IAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSM 541
Query: 519 GQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDT----SHPKIRDIHEFLGEL 574
G+ AE A V + +E +G+ P +W+E+ Q H FL GD + R I++ + EL
Sbjct: 542 GKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDEL 601
Query: 575 SKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTC 634
+++ E GY + +L DV+E+++E+ YHSEKLA+A+G+++TP P+++ +N R C
Sbjct: 602 MEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRIC 661
Query: 635 VDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
+CH +++ S + R++++RD++RFH F++G CSC YW
Sbjct: 662 KNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 7/234 (2%)
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL-MGSGVRPNEYTFTGVLKACADHAAE 318
D + K V+ + I + R E F LF L + + T+ +++AC +
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 319 HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGF 378
K V+G+MM G++P + + ++ ++ KCG A R+F++IP +L S+ S+I GF
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHT 438
G A F+++ + + + TF +L A G + G + H K G++
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ-LHVCALKLGVVDN 258
Query: 439 ADHYACVIDLLARSGRFNEAENIIDNMSIKPDK--FLWASLLGGCRIHGNIELA 490
+ID+ ++ G +A + M P+K W +++ G +HG E A
Sbjct: 259 TFVSCGLIDMYSKCGDIEDARCAFECM---PEKTTVAWNNVIAGYALHGYSEEA 309
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 335/537 (62%), Gaps = 2/537 (0%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N +I Y+K +R+ F++ P++ +W++ IS + + P +LE + M +
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG-NL 112
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
+ L S + A + +G+ +H ++ G D D V S+L+D+Y KCG + AR
Sbjct: 113 RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARK 172
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+FD+M ++VV+W+ M++ + G EE LF++ + + N+Y+F+ V+ CA+
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
LG+++HG ++ +D SF GS+LV LYSKCG + A +VFN++P +L W +++
Sbjct: 233 LELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKA 292
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+AQ+ + + F+ + SG KP+ ITF+ VL+AC+HAGLVD+G YF +KE +
Sbjct: 293 YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEP 351
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL 497
T HYA ++D+L R+GR EA +I NM I P + +W +LL C +H N ELA AA+ +
Sbjct: 352 TDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKV 411
Query: 498 FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVG 557
FE+ P + +I+L+N YA G++ + AK RK + RG K+ G SW+E + +VH F G
Sbjct: 412 FELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAG 471
Query: 558 DTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGII 617
+ H K ++I+E L EL ++M++ GY+ DT++VL +V+ ++K Q + YHSE+LA+AFG+I
Sbjct: 472 ERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLI 531
Query: 618 STPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
+ P PI+V KNLR C DCH A+K+ S +R II+RD+NRFH FEDG CSC DYW
Sbjct: 532 TFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 148/312 (47%), Gaps = 33/312 (10%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP + + +C + GR VH L+ + + +F+ + L+D+YAKCG + A++
Sbjct: 113 RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARK 172
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+FDEM R++ +W+ M+ GYA++G E+A LF +EA
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF------------------------KEA 208
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L E+ N ++ SS ++ A L LG++IHG +++ D V S+L+
Sbjct: 209 L--------FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
LY KCG + A +F+++ K++ W M+ + ++ LF+ + SG++PN T
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
F VL AC+ G+ M +P ++LVD+ + G + A V +P
Sbjct: 321 FLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
Query: 365 -RPDLVSWTSLI 375
P W +L+
Sbjct: 381 IDPTESVWGALL 392
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 157/305 (51%), Gaps = 11/305 (3%)
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G ++HGY+V++GL L +V + L++ Y K ++R F+ K + + I CF
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTT-WSSIISCFA 92
Query: 280 DGRRE-EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
+ +M +RP+++ K+CA + +G+ VH M+ GYD F
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
GS+LVD+Y+KCG A ++F+++P+ ++V+W+ ++ G+AQ G+ + AL F+ L
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
+ +F V+S C ++ L++ G + H + K ++ + ++ L ++ G A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGN----IELAKRAANALFEIEPENPATYITLANI 514
+ + + +K + +W ++L H + IEL KR L ++P N T++ + N
Sbjct: 272 YQVFNEVPVK-NLGIWNAMLKAYAQHSHTQKVIELFKRM--KLSGMKP-NFITFLNVLNA 327
Query: 515 YANAG 519
++AG
Sbjct: 328 CSHAG 332
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/610 (35%), Positives = 341/610 (55%), Gaps = 32/610 (5%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP+ + + + +C +E+G++ H I F+ N L+ +Y+
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYS---------- 182
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
LCS N +A ++ D++P D +++A+SGY+ G +E
Sbjct: 183 ---------LCSGNG------------EAIRVLDDLPYCDLSVFSSALSGYLECGAFKEG 221
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L++ R +E N T S L + + L L ++H +VR G + + AL++
Sbjct: 222 LDVLRK-TANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALIN 280
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+YGKCG + A+ +FD +++ TT++ F+D EE +LF + V PNEYT
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYT 340
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
F +L + A+ + G +HG +++ GY G+ALV++Y+K G+ + A + F+ +
Sbjct: 341 FAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
D+V+W ++I G + +G AL F+ ++ +G P++ITF+GVL AC+H G V++GL
Sbjct: 401 FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLH 460
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
YF+ + +K + HY C++ LL+++G F +AE+ + I+ D W +LL C +
Sbjct: 461 YFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVR 520
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
N L K+ A E P + Y+ L+NI+A + +W AKVR M RG+ K+PG SW
Sbjct: 521 RNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Query: 545 IEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLF 604
I I+ Q HVFL D HP+I I+ + E+ K+K GY PD HDV+EEQ+E NL
Sbjct: 581 IGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLS 640
Query: 605 YHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFE 664
YHSEKLAVA+G+I TP +P+ V KN+R C DCH+A+K SKI +R I++RDSNRFH F
Sbjct: 641 YHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFL 700
Query: 665 DGSCSCKDYW 674
DG CSC DYW
Sbjct: 701 DGQCSCCDYW 710
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 200/449 (44%), Gaps = 25/449 (5%)
Query: 113 YAKCGSLADAQRLFDEMGDR--DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNA 170
Y + G A + R D N++I Y K +ARKLFD MP R+ SW A
Sbjct: 46 YLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCA 105
Query: 171 AISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA 230
+ GY + G E L++F+ M S N+F + + + + GK+ HG ++
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 231 GLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLF 290
GL E V + L+ +Y C EA + D + D+ +++ + E G +EG +
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 291 RDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKC 350
R N T+ L+ ++ +L +VH M+R G++ A AL+++Y KC
Sbjct: 226 RKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKC 285
Query: 351 GNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVL 410
G A RVF+ ++ T+++ + Q+ + AL+ F + P++ TF +L
Sbjct: 286 GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345
Query: 411 SACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPD 470
++ L+ +G + H + K G + ++++ A+SG +A M+ + D
Sbjct: 346 NSIAELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-D 403
Query: 471 KFLWASLLGGCRIHGNIELAKRAANA----LFEIEPENPATYITLANIYANAG------- 519
W +++ GC HG L + A A +F E N T+I + ++ G
Sbjct: 404 IVTWNTMISGCSHHG---LGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLH 460
Query: 520 ---QWAEEAKVRKDME----IRGIVKKPG 541
Q ++ V+ D++ I G++ K G
Sbjct: 461 YFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
++A Q K +EA++L +D P+ ++ L+ + L+QG +H L S +
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGY 369
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD- 158
+ + N L+++YAK GS+ DA++ F M RD+ +WNTMI+G + G +A + FD
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 159 -----EMPRRDHFSWNAAISGYVSH-GRPREALEMF-RMMQKHE-SSNSNKFTLSSGLAA 210
E+P R F + SH G + L F ++M+K + + +T GL +
Sbjct: 430 MIFTGEIPNRITF---IGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLS 486
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
A + K+ ++ A ++ D V W LL+
Sbjct: 487 KAG-----MFKDAEDFMRTAPIEWDVVAWRTLLN 515
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/658 (34%), Positives = 358/658 (54%), Gaps = 69/658 (10%)
Query: 54 KEAVDLLHHVDR-----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNR 108
K+AVDL + R P+ +I+AC + LE G +V+A ++S + +
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSW 168
L+D+Y KC ++ + A++LFDE +
Sbjct: 277 LVDMYMKCNAI-------------------------------DVAKRLFDEYGASNLDLC 305
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV 228
NA S YV G REAL +F +M ++ ++ S +++ + + + GK HGY++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 229 RAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFS 288
R G + + + +AL+D+Y KC D A IFD+M +K VV+W +++ E+G + +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 289 LFRDL----------------MGS----------------GVRPNEYTFTGVLKACADHA 316
F + GS GV + T + AC
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
A L K ++ Y+ + G G+ LVD++S+CG+ + A +FN + D+ +WT+ IG
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
A G +RA+ F+ +++ G KPD + FVG L+AC+H GLV +G E F+S+ + HG+
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
HY C++DLL R+G EA +I++M ++P+ +W SLL CR+ GN+E+A AA
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 497 LFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLV 556
+ + PE +Y+ L+N+YA+AG+W + AKVR M+ +G+ K PG S I+I+ + H F
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 557 GDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGI 616
GD SHP++ +I L E+S++ G+VPD + VL DV+E++K L HSEKLA+A+G+
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGL 784
Query: 617 ISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
IS+ GT I++ KNLR C DCH+ K+ SK+ R+IILRD+NRFH G CSC D+W
Sbjct: 785 ISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 227/536 (42%), Gaps = 100/536 (18%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + ++AC + RA G ++H L + +F+ N L+ Y
Sbjct: 132 PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY------------ 179
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
A+ G L+ ARK+FDEM R+ SW + I GY ++A+
Sbjct: 180 -------------------AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
++F M + E N T+ ++A A + L G++++ ++ +G+++++++ SAL+D+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KC ++D A+ +FD+ ++ M G E +F +M SGVRP+ +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+ +C+ GK HGY++R G++ +AL+D+Y KC A R+F+++
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELL------------------------------- 394
+V+W S++ G+ +NG+ D A FE +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 395 -LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
+ G D +T + + SAC H G +D ++ I EK+G+ ++D+ +R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCG 519
Query: 454 R-------FNEAEN------------------------IIDNM---SIKPDKFLWASLLG 479
FN N + D+M +KPD + L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 480 GCRIHGNIELAKRAANALFEIEPENP--ATYITLANIYANAGQWAEEAKVRKDMEI 533
C G ++ K ++ ++ +P Y + ++ AG E ++ +DM +
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 205/427 (48%), Gaps = 21/427 (4%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQ---ARKLFDEMPRRDH-FSWNAAISGYVSHGRPREALE 186
D D+ + ++A +LG E A+++F+ F +N+ I GY S G EA+
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 187 MF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+F RMM S + K+T GL+A A G +IHG +V+ G D V ++L+
Sbjct: 121 LFLRMMNSGISPD--KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMI----HRCFEDGRREEGFSLFRDLMGSGVRPN 301
Y +CG LD AR +FD+M +++VVSWT+MI R F + F + RD V PN
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD---EEVTPN 235
Query: 302 EYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
T V+ ACA G++V+ ++ G + SALVD+Y KC +A R+F+
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 362 QIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
+ +L ++ + + G AL F L++ SG +PD+I+ + +S+C+ +
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC 481
G + H ++G + +ID+ + R + A I D MS K W S++ G
Sbjct: 356 G-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAGY 413
Query: 482 RIHGNIELAKRAANALFEIEPE-NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKP 540
+G ++ AA FE PE N ++ T+ + + E +V M+ + V
Sbjct: 414 VENGEVD----AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 541 GKSWIEI 547
G + + I
Sbjct: 470 GVTMMSI 476
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 14/252 (5%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCG---SLDEARGIFDQMVDKDVV-SWTTMIHR 276
K H L + GLD D + L+ + G SL A+ +F+ + ++I
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
G E LF +M SG+ P++YTF L ACA A+ G ++HG ++++GY
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALH-FFELLL 395
F ++LV Y++CG A +VF+++ ++VSWTS+I G+A+ A+ FF ++
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK----EKHGLMHTADHYACVIDLLAR 451
P+ +T V V+SAC ++ G + + I+ E + LM +A ++D+ +
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA-----LVDMYMK 283
Query: 452 SGRFNEAENIID 463
+ A+ + D
Sbjct: 284 CNAIDVAKRLFD 295
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/614 (33%), Positives = 343/614 (55%), Gaps = 15/614 (2%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+ ++ A + AL +G +H + + F+ +D+YA CG + A+ +FDEM
Sbjct: 114 FLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS 173
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVS----HGRPREALE 186
RD+ +WNTMI Y + G +++A KLF+EM + + VS G R
Sbjct: 174 HRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRA 233
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
++ + +++ L++ + A C+ + +E + L V +A++ Y
Sbjct: 234 IYEFLIENDVRMDTHL-LTALVTMYAGAGCMDMAREFFRKMSVRNL----FVSTAMVSGY 288
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
KCG LD+A+ IFDQ KD+V WTTMI E +E +F ++ SG++P+ +
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
V+ ACA+ K VH + G + +AL+++Y+KCG VF ++PR
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
++VSW+S+I + +G+ AL F + + +P+++TFVGVL C+H+GLV++G + F
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
S+ +++ + +HY C++DL R+ EA +I++M + + +W SL+ CRIHG
Sbjct: 469 ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
Query: 487 IELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
+EL K AA + E+EP++ + ++NIYA +W + +R+ ME + + K+ G S I+
Sbjct: 529 LELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588
Query: 547 IKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYH 606
+ H FL+GD H + +I+ L E+ K+K GYVPD VL DVEEE+K+ + +H
Sbjct: 589 QNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWH 648
Query: 607 SEKLAVAFGIISTPPGTP------IKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRF 660
SEKLA+ FG+++ I++ KNLR C DCH K SK+ +R+II+RD RF
Sbjct: 649 SEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRF 708
Query: 661 HCFEDGSCSCKDYW 674
HC+++G CSC+DYW
Sbjct: 709 HCYKNGLCSCRDYW 722
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 38/413 (9%)
Query: 153 ARKLFDEMPRR-DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
A +F +P + +N + PR + +F +H ++F+ L A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATI-LFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWT 271
+ + L G E+HG + D V + +D+Y CG ++ AR +FD+M +DVV+W
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 272 TMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR- 330
TMI R G +E F LF ++ S V P+E ++ AC + ++ +++
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 331 ------------VGYDPGS------------------FAGSALVDLYSKCGNTKIASRVF 360
V G+ F +A+V YSKCG A +F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 361 NQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD 420
+Q + DLV WT++I + ++ P AL FE + SG KPD ++ V+SAC + G++D
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 421 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
K ++ HS +GL +I++ A+ G + ++ + M + + W+S++
Sbjct: 362 KA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419
Query: 481 CRIHGNIE--LAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDM 531
+HG L+ A +EP N T++ + +++G E K+ M
Sbjct: 420 LSMHGEASDALSLFARMKQENVEP-NEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 3/320 (0%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + +++AC R + R ++ ++ + L+ +YA G + A+
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F +M R+L M++GY+K G L+ A+ +FD+ ++D W IS YV P+EAL
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+F M + ++ S ++A A + L K +H + GL+ + + +AL+++
Sbjct: 330 RVFEEMC-CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KCG LD R +F++M ++VVSW++MI+ G + SLF + V PNE TF
Sbjct: 389 YAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTF 448
Query: 306 TGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
GVL C+ GK++ M P +VDL+ + + A V +P
Sbjct: 449 VGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP 508
Query: 365 -RPDLVSWTSLIGGFAQNGQ 383
++V W SL+ +G+
Sbjct: 509 VASNVVIWGSLMSACRIHGE 528
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/615 (35%), Positives = 327/615 (53%), Gaps = 70/615 (11%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP + ++ AC + GR++H +F+ N L+ +Y KC
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKC-------- 188
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
G+L +AR + DEM RRD SWN+ + GY + R +A
Sbjct: 189 -----------------------GFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA 225
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
LE+ R M+ S K + +G A+ +P + + + V++
Sbjct: 226 LEVCREME------SVKISHDAG-TMASLLPAV------------SNTTTENVMY----- 261
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+ +F +M K +VSW MI ++ E L+ + G P+ +
Sbjct: 262 ----------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVS 311
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
T VL AC D +A LGK++HGY+ R P +AL+D+Y+KCG + A VF +
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
D+VSWT++I + +G+ A+ F L SG PD I FV L+AC+HAGL+++G
Sbjct: 372 SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS 431
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
F + + + + +H AC++DLL R+G+ EA I +MS++P++ +W +LLG CR+H
Sbjct: 432 CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
+ ++ AA+ LF++ PE Y+ L+NIYA AG+W E +R M+ +G+ K PG S
Sbjct: 492 SDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASN 551
Query: 545 IEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLF 604
+E+ R +H FLVGD SHP+ +I+ L L KKMKE GYVPD+ LHDVEEE KE +L
Sbjct: 552 VEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLA 611
Query: 605 YHSEKLAVAFGIISTP-----PGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNR 659
HSEKLA+ F +++T I++ KNLR C DCH A K S+I R+II+RD+NR
Sbjct: 612 VHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNR 671
Query: 660 FHCFEDGSCSCKDYW 674
FH F G CSC DYW
Sbjct: 672 FHVFRFGVCSCGDYW 686
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 150/336 (44%), Gaps = 25/336 (7%)
Query: 215 PCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI 274
P +R + +H ++ L + + L+ Y + AR +FD++ +++V+ MI
Sbjct: 53 PDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYD 334
+G EG +F + G VRP+ YTF VLKAC+ +G+++HG +VG
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 335 PGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELL 394
F G+ LV +Y KCG A V +++ R D+VSW SL+ G+AQN + D AL +
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 395 LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 454
D T +L A ++ + + Y + K G + + +I + ++
Sbjct: 233 ESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAM 289
Query: 455 FNEAENIIDNMS---IKPDKFLWASLLGGC----------RIHGNIELAKRAANALFEIE 501
EA + M +PD S+L C +IHG IE K N L E
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE-- 347
Query: 502 PENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
L ++YA G + V ++M+ R +V
Sbjct: 348 -------NALIDMYAKCGCLEKARDVFENMKSRDVV 376
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 55 EAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
EAV+L ++ P ++++ AC AL G+++H + IP + + N L+
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHF 166
D+YAKCG L A+ +F+ M RD+ SW MI+ Y G A LF ++ D
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL--RLG--KE 222
++ ++ G E F++M H + ++ L A + L R G KE
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDH-------YKITPRLEHLACMVDLLGRAGKVKE 464
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKC 249
+ ++ ++ +E VW ALL G C
Sbjct: 465 AYRFIQDMSMEPNERVWGALL---GAC 488
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/699 (31%), Positives = 363/699 (51%), Gaps = 79/699 (11%)
Query: 54 KEAVDLLHHVDRPSPRLYST----LIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRL 109
++AV+L + + Y + L+ C +GR++H + + N L
Sbjct: 71 EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 110 LDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP----RRDH 165
+ +Y++ G L ++++F+ M DR+L SWN++++ Y KLG+++ A L DEM + D
Sbjct: 131 IVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI 190
Query: 166 FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHG 225
+WN+ +SGY S G ++A+ + + MQ S ++SS L A A L+LGK IHG
Sbjct: 191 VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS-SISSLLQAVAEPGHLKLGKAIHG 249
Query: 226 YLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI----HRCFED- 280
Y++R L D V + L+D+Y K G L AR +FD M K++V+W +++ + C
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD 309
Query: 281 ------------------------------GRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
G+ E+ + + GV PN ++T +
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 311 ACADH-----------------------------------AAEHLGKEVHGYMMRVGYDP 335
C+ + + H GKEVHG+ +R
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
++ +ALVD+Y K G+ + A +F I L SW ++ G+A G+ + + F ++L
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
++G +PD ITF VLS C ++GLV +G +YF ++ ++G++ T +H +C++DLL RSG
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 456 NEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIY 515
+EA + I MS+KPD +W + L C+IH ++ELA+ A L +EP N A Y+ + N+Y
Sbjct: 550 DEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLY 609
Query: 516 ANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELS 575
+N +W + ++R M + + SWI+I + VH+F +HP DI+ L +L
Sbjct: 610 SNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLV 669
Query: 576 KKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCV 635
+MK+ GYVPDT+ + D+ + +KE+ L H+EKLA+ +G+I PI+V KN C
Sbjct: 670 SEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICS 729
Query: 636 DCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
D HT KY S + R+I+L++ R H F DG CSC D W
Sbjct: 730 DSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 169/369 (45%), Gaps = 42/369 (11%)
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
A KLFDEMP+RD +WN + + G +A+E+FR MQ + + T+ L +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ-FSGAKAYDSTMVKLLQVCS 100
Query: 213 AIPCLRLGKEIHGYLVRAGL-------------------------------DLDEVVWSA 241
G++IHGY++R GL D + W++
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNS 160
Query: 242 LLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
+L Y K G +D+A G+ D+M + D+V+W +++ G ++ ++ + + +G
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIAS 357
++P+ + + +L+A A+ LGK +HGY++R + + L+D+Y K G A
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR 280
Query: 358 RVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAG 417
VF+ + ++V+W SL+ G + A + K G KPD IT+ + S G
Sbjct: 281 MVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 418 LVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS---IKPDKFLW 474
+K L+ +KEK G+ + + +++G F A + M + P+
Sbjct: 341 KPEKALDVIGKMKEK-GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATM 399
Query: 475 ASLLG--GC 481
++LL GC
Sbjct: 400 STLLKILGC 408
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 181/409 (44%), Gaps = 59/409 (14%)
Query: 219 LGKEIHGYLVRAGLD-LDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
LG IHG L++ GLD D V SA + YG+C SL A +FD+M +D ++W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
G E+ LFR++ SG + + T +L+ C++ G+++HGY++R+G +
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIP--------------------------------- 364
++L+ +YS+ G +++ +VFN +
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 365 --RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
+PD+V+W SL+ G+A G A+ + + +G KP + +L A G + G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 423 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCR 482
+ H ++ L + +ID+ ++G A + D M K + W SL+ G
Sbjct: 245 -KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK-NIVAWNSLVSGLS 302
Query: 483 IHGNIELAKRAANALFEIEPE----NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVK 538
L K A + +E E + T+ +LA+ YA G+ + V M+ +G+
Sbjct: 303 YAC---LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 539 KPGKSWIEIKRQVHVFLVGDTSHPKIRD-IHEFLGELSKKMKEEGYVPD 586
SW I G + + R+ + F+ KM+EEG P+
Sbjct: 360 NV-VSWTAI-------FSGCSKNGNFRNALKVFI-----KMQEEGVGPN 395
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/657 (34%), Positives = 357/657 (54%), Gaps = 69/657 (10%)
Query: 54 KEAVDLLHHVDR-----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNR 108
K+AVDL + R P+ +I+AC + LE G +V+A ++S + +
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSW 168
L+D+Y KC ++ + A++LFDE +
Sbjct: 277 LVDMYMKCNAI-------------------------------DVAKRLFDEYGASNLDLC 305
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV 228
NA S YV G REAL +F +M ++ ++ S +++ + + + GK HGY++
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 229 RAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFS 288
R G + + + +AL+D+Y KC D A IFD+M +K VV+W +++ E+G + +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 289 LFRDL----------------MGS----------------GVRPNEYTFTGVLKACADHA 316
F + GS GV + T + AC
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
A L K ++ Y+ + G G+ LVD++S+CG+ + A +FN + D+ +WT+ IG
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
A G +RA+ F+ +++ G KPD + FVG L+AC+H GLV +G E F+S+ + HG+
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
HY C++DLL R+G EA +I++M ++P+ +W SLL CR+ GN+E+A AA
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 497 LFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLV 556
+ + PE +Y+ L+N+YA+AG+W + AKVR M+ +G+ K PG S I+I+ + H F
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 557 GDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGI 616
GD SHP++ +I L E+S++ G+VPD + VL DV+E++K L HSEKLA+A+G+
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGL 784
Query: 617 ISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDY 673
IS+ GT I++ KNLR C DCH+ K+ SK+ R+IILRD+NRFH G CSC D+
Sbjct: 785 ISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 227/536 (42%), Gaps = 100/536 (18%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + ++AC + RA G ++H L + +F+ N L+ Y
Sbjct: 132 PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY------------ 179
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
A+ G L+ ARK+FDEM R+ SW + I GY ++A+
Sbjct: 180 -------------------AECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
++F M + E N T+ ++A A + L G++++ ++ +G+++++++ SAL+D+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KC ++D A+ +FD+ ++ M G E +F +M SGVRP+ +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+ +C+ GK HGY++R G++ +AL+D+Y KC A R+F+++
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELL------------------------------- 394
+V+W S++ G+ +NG+ D A FE +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 395 -LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
+ G D +T + + SAC H G +D ++ I EK+G+ ++D+ +R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCG 519
Query: 454 R-------FNEAEN------------------------IIDNM---SIKPDKFLWASLLG 479
FN N + D+M +KPD + L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 480 GCRIHGNIELAKRAANALFEIEPENPAT--YITLANIYANAGQWAEEAKVRKDMEI 533
C G ++ K ++ ++ +P Y + ++ AG E ++ +DM +
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 205/427 (48%), Gaps = 21/427 (4%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQ---ARKLFDEMPRRDH-FSWNAAISGYVSHGRPREALE 186
D D+ + ++A +LG E A+++F+ F +N+ I GY S G EA+
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 187 MF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+F RMM S + K+T GL+A A G +IHG +V+ G D V ++L+
Sbjct: 121 LFLRMMNSGISPD--KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMI----HRCFEDGRREEGFSLFRDLMGSGVRPN 301
Y +CG LD AR +FD+M +++VVSWT+MI R F + F + RD V PN
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD---EEVTPN 235
Query: 302 EYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
T V+ ACA G++V+ ++ G + SALVD+Y KC +A R+F+
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 362 QIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
+ +L ++ + + G AL F L++ SG +PD+I+ + +S+C+ +
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC 481
G + H ++G + +ID+ + R + A I D MS K W S++ G
Sbjct: 356 G-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAGY 413
Query: 482 RIHGNIELAKRAANALFEIEPE-NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKP 540
+G ++ AA FE PE N ++ T+ + + E +V M+ + V
Sbjct: 414 VENGEVD----AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 541 GKSWIEI 547
G + + I
Sbjct: 470 GVTMMSI 476
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 14/252 (5%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCG---SLDEARGIFDQMVDKDVV-SWTTMIHR 276
K H L + GLD D + L+ + G SL A+ +F+ + ++I
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
G E LF +M SG+ P++YTF L ACA A+ G ++HG ++++GY
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALH-FFELLL 395
F ++LV Y++CG A +VF+++ ++VSWTS+I G+A+ A+ FF ++
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK----EKHGLMHTADHYACVIDLLAR 451
P+ +T V V+SAC ++ G + + I+ E + LM +A ++D+ +
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA-----LVDMYMK 283
Query: 452 SGRFNEAENIID 463
+ A+ + D
Sbjct: 284 CNAIDVAKRLFD 295
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/638 (35%), Positives = 342/638 (53%), Gaps = 48/638 (7%)
Query: 44 INALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+A +Q L +AV L + D+P +Y+TL+ + V RAL+ GR++HA +
Sbjct: 156 ISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGL 215
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
I ++++Y KCG WL A+++FD+
Sbjct: 216 CSNTSIETGIVNMYVKCG-------------------------------WLVGAKRVFDQ 244
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M + + + GY GR R+AL++F + E + F S L A A++ L L
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVT-EGVEWDSFVFSVVLKACASLEELNL 303
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
GK+IH + + GL+ + V + L+D Y KC S + A F ++ + + VSW+ +I +
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 280 DGRREEGFSLFRDLMGSGVRP-NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
+ EE F+ L N +T+T + +AC+ A ++G +VH ++ +
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
SAL+ +YSKCG A+ VF + PD+V+WT+ I G A G AL FE ++ G
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
KP+ +TF+ VL+AC+HAGLV++G ++ K+ + T DHY C+ID+ ARSG +EA
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANA 518
+ NM +PD W L GC H N+EL + A L +++PE+ A Y+ N+Y A
Sbjct: 544 LKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWA 603
Query: 519 GQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKM 578
G+W E A++ K M R + K+ SWI+ K ++H F+VGD HP+ ++I+E L E M
Sbjct: 604 GKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFM 663
Query: 579 KEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIIST--PPGTPIKVFKNLRTCVD 636
EG + N E++EQ L HSE+LA+AFG+IS PIKVFKNLR C D
Sbjct: 664 --EGDMFQCNMT------ERREQ-LLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPD 714
Query: 637 CHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
CH K+ S + +I++RDS RFH F++G CSC DYW
Sbjct: 715 CHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 231/486 (47%), Gaps = 52/486 (10%)
Query: 46 ALCQQKRLKEAVDLLHHVDRP----SPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIP 101
+L + ++L EA + L +D+ S Y L AC R+L GR +H + P
Sbjct: 57 SLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENP 116
Query: 102 GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP 161
+ + N +L +Y +C SL DA KLFDEM
Sbjct: 117 SVLLQNCVLQMYCECRSLEDAD-------------------------------KLFDEMS 145
Query: 162 RRDHFSWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKFTLSSGLAAAAAIPCLRLG 220
+ S IS Y G +A+ +F M+ + S+ +T + L + L G
Sbjct: 146 ELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYT--TLLKSLVNPRALDFG 203
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
++IH +++RAGL + + + ++++Y KCG L A+ +FDQM K V+ T ++ +
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
GR + LF DL+ GV + + F+ VLKACA +LGK++H + ++G + G
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 341 SALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFE-LLLKSGT 399
+ LVD Y KC + + A R F +I P+ VSW+++I G+ Q Q + A+ F+ L K+ +
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
+ T+ + AC+ + G + H+ K L+ + + +I + ++ G ++A
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQ-VHADAIKRSLIGSQYGESALITMYSKCGCLDDAN 442
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE------IEPENPATYITLAN 513
+ ++M PD W + + G +GN A R LFE ++P N T+I +
Sbjct: 443 EVFESMD-NPDIVAWTAFISGHAYYGNASEALR----LFEKMVSCGMKP-NSVTFIAVLT 496
Query: 514 IYANAG 519
++AG
Sbjct: 497 ACSHAG 502
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/526 (37%), Positives = 305/526 (57%), Gaps = 2/526 (0%)
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLA 209
+ AR LF+ M D +N+ GY P E +F + + + + +T S L
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLK 137
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS 269
A A L G+++H ++ GLD + V L+++Y +C +D AR +FD++V+ VV
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 270 WTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM 329
+ MI R E SLFR++ G ++PNE T VL +CA + LGK +H Y
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 330 RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALH 389
+ + +AL+D+++KCG+ A +F ++ D +W+++I +A +G+ ++++
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 390 FFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 449
FE + +PD+ITF+G+L+AC+H G V++G +YF + K G++ + HY ++DLL
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 450 ARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYI 509
+R+G +A ID + I P LW LL C H N++LA++ + +FE++ + Y+
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYV 437
Query: 510 TLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHE 569
L+N+YA +W +RK M+ R VK PG S IE+ VH F GD +H
Sbjct: 438 ILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHR 497
Query: 570 FLGELSKKMKEEGYVPDTNFVLH-DVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVF 628
L E+ K++K GYVPDT+ V+H ++ +++KE L YHSEKLA+ FG+++TPPGT I+V
Sbjct: 498 ALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVV 557
Query: 629 KNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
KNLR C DCH A K S I RK++LRD RFH FEDG CSC D+W
Sbjct: 558 KNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 157/333 (47%), Gaps = 34/333 (10%)
Query: 57 VDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKC 116
V++L P + +L+ AC +ALE+GR++H L+ +++ L+++Y +C
Sbjct: 118 VEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC 177
Query: 117 GSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYV 176
+ + AR +FD + +NA I+GY
Sbjct: 178 EDV-------------------------------DSARCVFDRIVEPCVVCYNAMITGYA 206
Query: 177 SHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDE 236
RP EAL +FR MQ + N+ TL S L++ A + L LGK IH Y +
Sbjct: 207 RRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYV 265
Query: 237 VVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS 296
V +AL+D++ KCGSLD+A IF++M KD +W+ MI G+ E+ +F +
Sbjct: 266 KVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 297 GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKI 355
V+P+E TF G+L AC+ G++ M+ + G P ++VDL S+ GN +
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 356 ASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRA 387
A +++P P + W L+ + + D A
Sbjct: 386 AYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I ++ R EA+ L + +P+ +++++C +L+ G+ +H K
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARK 155
+F + ++ L+D++AKCGSL DA +F++M +D +W+ MI YA G E++
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 156 LFDEM----PRRDHFSWNAAISGYVSHGRPREALEMFRMM 191
+F+ M + D ++ ++ GR E + F M
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 309/530 (58%), Gaps = 3/530 (0%)
Query: 147 LGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
+G + AR++FDEM + F WN GYV + P E+L +++ M + ++FT
Sbjct: 56 IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM-RDLGVRPDEFTYPF 114
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
+ A + + G +H ++V+ G +V + L+ +Y K G L A +F+ M KD
Sbjct: 115 VVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 174
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
+V+W + C + G F + V+ + +T +L AC + +G+E++
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 234
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
+ D +A +D++ KCGNT+ A +F ++ + ++VSW+++I G+A NG
Sbjct: 235 RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSRE 294
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH--GLMHTADHYAC 444
AL F + G +P+ +TF+GVLSAC+HAGLV++G YF + + + L +HYAC
Sbjct: 295 ALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYAC 354
Query: 445 VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPEN 504
++DLL RSG EA I M ++PD +W +LLG C +H ++ L ++ A+ L E P+
Sbjct: 355 MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDI 414
Query: 505 PATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKI 564
+ ++ L+NIYA AG+W KVR M G K S +E + ++H F GD SHP+
Sbjct: 415 GSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQS 474
Query: 565 RDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTP 624
+ I+E L E+ KK+++ GYVPDT V HDVE E+KE +L +HSEKLA+AFG+I PG P
Sbjct: 475 KAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHP 534
Query: 625 IKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
I+V KNLRTC DCH K+ S + +II+RD NRFH F +G CSCK++W
Sbjct: 535 IRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 126/244 (51%), Gaps = 5/244 (2%)
Query: 140 MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS 199
++ Y K G L A LF+ M +D +WNA ++ V G ALE F M ++
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA-DAVQF 208
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
+ FT+ S L+A + L +G+EI+ + +D + +V +A LD++ KCG+ + AR +F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEH 319
++M ++VVSW+TMI +G E +LF + G+RPN TF GVL AC+ +
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 320 LGKEVHGYMMRV---GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLI 375
GK M++ +P + +VDL + G + A ++P PD W +L+
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 376 GGFA 379
G A
Sbjct: 389 GACA 392
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 147/326 (45%), Gaps = 15/326 (4%)
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
K LS L A+++ P + K+IH ++R G + + LL+ G + AR +F
Sbjct: 9 TKQMLSELLRASSSKP--KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVF 66
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEH 319
D+M + W T+ + E L++ + GVRP+E+T+ V+KA +
Sbjct: 67 DEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFS 126
Query: 320 LGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFA 379
G +H ++++ G+ + LV +Y K G A +F + DLV+W + +
Sbjct: 127 CGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCV 186
Query: 380 QNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTA 439
Q G AL +F + + D T V +LSAC G ++ G E + +++ +
Sbjct: 187 QTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII 246
Query: 440 DHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE 499
A +D+ + G A + + M + + W++++ G ++G+ R A LF
Sbjct: 247 VENA-RLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMIVGYAMNGD----SREALTLFT 300
Query: 500 ------IEPENPATYITLANIYANAG 519
+ P N T++ + + ++AG
Sbjct: 301 TMQNEGLRP-NYVTFLGVLSACSHAG 325
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 36/209 (17%)
Query: 73 TLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR 132
++++AC + +LE G ++ + I + N LD++ KCG+ A+ LF+EM R
Sbjct: 215 SMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR 274
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
++ SW+TMI GYA +G REAL +F MQ
Sbjct: 275 NVVSWSTMIVGYAM-------------------------------NGDSREALTLFTTMQ 303
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA---GLDLDEVVWSALLDLYGKC 249
+E N T L+A + + GK +V++ L+ + ++ ++DL G+
Sbjct: 304 -NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRS 362
Query: 250 GSLDEARGIFDQM-VDKDVVSWTTMIHRC 277
G L+EA +M V+ D W ++ C
Sbjct: 363 GLLEEAYEFIKKMPVEPDTGIWGALLGAC 391
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 312/557 (56%), Gaps = 36/557 (6%)
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
AR++ + + R+ F W A I GY G+ EA+ M+ M+K E + + FT S+ L A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVS-FTFSALLKACG 160
Query: 213 AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTT 272
+ L LG++ H R V + ++D+Y KC S+D AR +FD+M ++DV+SWT
Sbjct: 161 TMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 273 MIH------------RCFE-------------------DGRREEGFSLFRDLMGSGVRPN 301
+I FE + + +E F + SG+R +
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 302 EYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS--FAGSALVDLYSKCGNTKIASRV 359
E T G + ACA A + GY P GSAL+D+YSKCGN + A V
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 360 FNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL-KSGTKPDQITFVGVLSACTHAGL 418
F + ++ +++S+I G A +G+ ALH F ++ ++ KP+ +TFVG L AC+H+GL
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 419 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLL 478
VD+G + F S+ + G+ T DHY C++DLL R+GR EA +I MS++P +W +LL
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 479 GGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVK 538
G CRIH N E+A+ AA LFE+EP+ YI L+N+YA+AG W +VRK ++ +G+ K
Sbjct: 461 GACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKK 520
Query: 539 KPGKSWIEIKR-QVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEE 597
P SW+ K Q+H F G+ +HP I + L EL +++ GY PD + V +DV +
Sbjct: 521 TPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDN 580
Query: 598 QKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDS 657
K L H+EKLA+AF +++T + I + KNLR C+DCH M+ S++ + II+RD+
Sbjct: 581 AKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDN 640
Query: 658 NRFHCFEDGSCSCKDYW 674
RFH F G CSC D+W
Sbjct: 641 MRFHHFRSGDCSCGDFW 657
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 183/348 (52%), Gaps = 16/348 (4%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P +S L+ AC + L GR+ HA T +++ N ++D+Y KC S+ A+++
Sbjct: 147 PVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKV 206
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FDEM +RD+ SW +IA YA++G +E A +LF+ +P +D +W A ++G+ + +P+EAL
Sbjct: 207 FDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEAL 266
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDE--VVWSALL 243
E F M+K +++ T++ ++A A + + ++G + V+ SAL+
Sbjct: 267 EYFDRMEK-SGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALI 325
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG-SGVRPNE 302
D+Y KCG+++EA +F M +K+V ++++MI GR +E LF ++ + ++PN
Sbjct: 326 DMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNT 385
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
TF G L AC+ G++V M + G P + +VDL + G + A +
Sbjct: 386 VTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIK 445
Query: 362 QIP-RPDLVSWTSLIGGFAQNGQPD----RALHFFELLLKSGTKPDQI 404
+ P W +L+G + P+ A H FEL +PD I
Sbjct: 446 TMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFEL------EPDII 487
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 43/354 (12%)
Query: 195 ESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG-SLD 253
E SN + +SS ++ L K+IHG+++R GLD + + L+ K G +D
Sbjct: 40 EISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD 99
Query: 254 E-ARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
AR + + + ++ WT +I +G+ +E +++ + + P +TF+ +LKAC
Sbjct: 100 PYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKAC 159
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKC---------------------- 350
+LG++ H R+ + G+ ++D+Y KC
Sbjct: 160 GTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWT 219
Query: 351 ---------GNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
GN + A+ +F +P D+V+WT+++ GFAQN +P AL +F+ + KSG +
Sbjct: 220 ELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA 279
Query: 402 DQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY---ACVIDLLARSGRFNEA 458
D++T G +SAC G K + I +K G +DH + +ID+ ++ G EA
Sbjct: 280 DEVTVAGYISACAQLG-ASKYADRAVQIAQKSGY-SPSDHVVIGSALIDMYSKCGNVEEA 337
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALF---EIEPENPATYI 509
N+ +M+ K + F ++S++ G HG + A + + EI+P N T++
Sbjct: 338 VNVFMSMNNK-NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKP-NTVTFV 389
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/554 (37%), Positives = 314/554 (56%), Gaps = 42/554 (7%)
Query: 162 RRDHFSWNA---AISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
+ + F WN AI VS + + ++ M+ H S + T L + L
Sbjct: 21 KLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVS-PDFHTFPFLLPSFHNPLHLP 79
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL-------------------------- 252
LG+ H ++ GLD D V ++LL++Y CG L
Sbjct: 80 LGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 253 -----DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM-----GSGVRPNE 302
D+AR +FD+M +++V+SW+ +I+ G+ +E LFR++ + VRPNE
Sbjct: 140 KAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNE 199
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
+T + VL AC A GK VH Y+ + + G+AL+D+Y+KCG+ + A RVFN
Sbjct: 200 FTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNA 259
Query: 363 I-PRPDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSACTHAGLVD 420
+ + D+ +++++I A G D F E+ P+ +TFVG+L AC H GL++
Sbjct: 260 LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 421 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+G YF + E+ G+ + HY C++DL RSG EAE+ I +M ++PD +W SLL G
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Query: 481 CRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKP 540
R+ G+I+ + A L E++P N Y+ L+N+YA G+W E +R +ME++GI K P
Sbjct: 380 SRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVP 439
Query: 541 GKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKE 600
G S++E++ VH F+VGD S + I+ L E+ ++++E GYV DT VL D+ E+ KE
Sbjct: 440 GCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKE 499
Query: 601 QNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRF 660
L YHSEKLA+AF ++ T PGTP+++ KNLR C DCH MK SK+ R+I++RD NRF
Sbjct: 500 IALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRF 559
Query: 661 HCFEDGSCSCKDYW 674
H F DGSCSC+D+W
Sbjct: 560 HHFRDGSCSCRDFW 573
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 172/302 (56%), Gaps = 8/302 (2%)
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAG 143
L G+R HA F+ LL++Y+ CG L AQR+FD+ G +DL +WN+++
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS---- 199
YAK G ++ ARKLFDEMP R+ SW+ I+GYV G+ +EAL++FR MQ + + +
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
N+FT+S+ L+A + L GK +H Y+ + +++D V+ +AL+D+Y KCGSL+ A+ +F
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 260 DQM-VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS-GVRPNEYTFTGVLKACADHAA 317
+ + KDV +++ MI G +E F LF ++ S + PN TF G+L AC
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 318 EHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLI 375
+ GK M+ G P +VDLY + G K A +P PD++ W SL+
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 376 GG 377
G
Sbjct: 378 SG 379
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 26/242 (10%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPR---------LYSTLIAACVRHRALEQGRRVHALT 94
IN + KEA+DL + P P ST+++AC R ALEQG+ VHA
Sbjct: 166 INGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI 225
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD-RDLCSWNTMIAGYAKLGWLEQA 153
+ I + L+D+YAKCGSL A+R+F+ +G +D+ +++ MI A G ++
Sbjct: 226 DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDEC 285
Query: 154 RKLFDEMPRRDHFSWNAA-----ISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGL 208
+LF EM D+ + N+ + V G E F+MM + +F ++ +
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE-------EFGITPSI 338
Query: 209 AAAAAIPCLR----LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD 264
+ L L KE ++ ++ D ++W +LL G + G ++++
Sbjct: 339 QHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIE 398
Query: 265 KD 266
D
Sbjct: 399 LD 400
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/540 (35%), Positives = 323/540 (59%), Gaps = 7/540 (1%)
Query: 140 MIAGYAKLGW---LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF-RMMQKHE 195
++A A GW + A +F + F +N I GYV+ EAL + MMQ+
Sbjct: 69 VLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQR-- 126
Query: 196 SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEA 255
+ + FT L A + +R GK+IHG + + GL+ D V ++L+++YG+CG ++ +
Sbjct: 127 GNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELS 186
Query: 256 RGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG-SGVRPNEYTFTGVLKACAD 314
+F+++ K SW++M+ G E LFR + + ++ E L ACA+
Sbjct: 187 SAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACAN 246
Query: 315 HAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSL 374
A +LG +HG+++R + ++LVD+Y KCG A +F ++ + + ++++++
Sbjct: 247 TGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAM 306
Query: 375 IGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
I G A +G+ + AL F ++K G +PD + +V VL+AC+H+GLV +G F + ++
Sbjct: 307 ISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGK 366
Query: 435 LMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAA 494
+ TA+HY C++DLL R+G EA I ++ I+ + +W + L CR+ NIEL + AA
Sbjct: 367 VEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAA 426
Query: 495 NALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVF 554
L ++ NP Y+ ++N+Y+ W + A+ R ++ I+G+ + PG S +E+K + H F
Sbjct: 427 QELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRF 486
Query: 555 LVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAF 614
+ D SHPK ++I++ L ++ ++K EGY PD +L +V+EE+K++ L HS+K+A+AF
Sbjct: 487 VSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAF 546
Query: 615 GIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
G++ TPPG+ IK+ +NLR C DCHT K S I +R+I++RD NRFH F+ G+CSCKDYW
Sbjct: 547 GLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 148/320 (46%), Gaps = 33/320 (10%)
Query: 58 DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCG 117
+++ + P Y L+ AC R +++ +G+++H +F+ N L+++Y +CG
Sbjct: 122 EMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCG 181
Query: 118 SLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVS 177
+ + +F+++ + SW++M++ A +G W+
Sbjct: 182 EMELSSAVFEKLESKTAASWSSMVSARAGMGM------------------WS-------- 215
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
E L +FR M + + + + S L A A L LG IHG+L+R +L+ +
Sbjct: 216 -----ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII 270
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
V ++L+D+Y KCG LD+A IF +M ++ ++++ MI G E +F ++ G
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEG 330
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG-YDPGSFAGSALVDLYSKCGNTKIA 356
+ P+ + VL AC+ G+ V M++ G +P + LVDL + G + A
Sbjct: 331 LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEA 390
Query: 357 SRVFNQIP-RPDLVSWTSLI 375
IP + V W + +
Sbjct: 391 LETIQSIPIEKNDVIWRTFL 410
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 310/538 (57%), Gaps = 16/538 (2%)
Query: 147 LGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS-----NK 201
G L A ++F +P+ WNA I G+ P A +R M + SS+S +
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 202 FTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ 261
T S L A A C ++H + R GL D ++ + LLD Y K G L A +FD+
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 262 MVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
M +DV SW +I R E L++ + G+R +E T L AC+ HLG
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS-----HLG 224
Query: 322 KEVHGYMMRVGY-DPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFA 379
G + GY + +A +D+YSKCG A +VF Q + +V+W ++I GFA
Sbjct: 225 DVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 380 QNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTA 439
+G+ RAL F+ L +G KPD ++++ L+AC HAGLV+ GL F+++ K G+
Sbjct: 285 VHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNM 343
Query: 440 DHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE 499
HY CV+DLL+R+GR EA +II +MS+ PD LW SLLG I+ ++E+A+ A+ + E
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 500 IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDT 559
+ N ++ L+N+YA G+W + +VR DME + + K PG S+IE K +H F D
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDK 463
Query: 560 SHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGII-- 617
SH + R+I+E + E+ K++E+GYV T VLHD+ EE+KE L YHSEKLAVA+G++
Sbjct: 464 SHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMM 523
Query: 618 -STPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
+P++V NLR C DCH K+ SKI +R+II+RD RFH F+DGSCSC+D+W
Sbjct: 524 DGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 130 GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFR 189
D LC+ T++ Y+K G L A KLFDEMP RD SWNA I+G VS R EA+E+++
Sbjct: 142 ADSLLCT--TLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEI-HGYLVRAGLDLDEVVWSALLDLYGK 248
M+ E ++ T+ + L A + + ++ G+ I HGY + + +V +A +D+Y K
Sbjct: 200 RMET-EGIRRSEVTVVAALGACSHLGDVKEGENIFHGY-----SNDNVIVSNAAIDMYSK 253
Query: 249 CGSLDEARGIFDQMV-DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG 307
CG +D+A +F+Q K VV+W TMI G +F L +G++P++ ++
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 308 VLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR-P 366
L AC G V M G + +VDL S+ G + A + + P
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIP 373
Query: 367 DLVSWTSLIGG 377
D V W SL+G
Sbjct: 374 DPVLWQSLLGA 384
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 322 KEVHGYMMRVGYDPGSFAGSALVD--LYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFA 379
K++ + + G+ SF S L++ S G+ A ++F IP+P W ++I GFA
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFA 79
Query: 380 QNGQPDRALHFFELLLKSGT------KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH 433
+ P A ++ +L+ + + D +T L AC A L ++ H +
Sbjct: 80 GSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA-LCSSAMDQLHCQINRR 138
Query: 434 GLMHTADHYAC--VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN----- 486
GL +AD C ++D +++G A + D M ++ D W +L+ G + GN
Sbjct: 139 GL--SADSLLCTTLLDAYSKNGDLISAYKLFDEMPVR-DVASWNALIAGL-VSGNRASEA 194
Query: 487 IELAKR 492
+EL KR
Sbjct: 195 MELYKR 200
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/558 (35%), Positives = 302/558 (54%), Gaps = 33/558 (5%)
Query: 149 WLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGL 208
+L A+ +FD R D F WN I G+ P +L +++ M S+ N +T S L
Sbjct: 64 FLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRML-CSSAPHNAYTFPSLL 122
Query: 209 AAAAAIPCLRLGKEIHGYLVRAGLD-------------------------------LDEV 237
A + + +IH + + G + D+V
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
W++++ Y K G +D A +F +M +K+ +SWTTMI + +E LF ++ S
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIAS 357
V P+ + L ACA A GK +H Y+ + S G L+D+Y+KCG + A
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 358 RVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAG 417
VF I + + +WT+LI G+A +G A+ F + K G KP+ ITF VL+AC++ G
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 418 LVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASL 477
LV++G F+S++ + L T +HY C++DLL R+G +EA+ I M +KP+ +W +L
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 478 LGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
L CRIH NIEL + L I+P + Y+ ANI+A +W + A+ R+ M+ +G+
Sbjct: 423 LKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA 482
Query: 538 KKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHD-VEE 596
K PG S I ++ H FL GD SHP+I I + +K++E GYVP+ +L D V++
Sbjct: 483 KVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDD 542
Query: 597 EQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRD 656
+++E + HSEKLA+ +G+I T PGT I++ KNLR C DCH K SKI +R I++RD
Sbjct: 543 DEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRD 602
Query: 657 SNRFHCFEDGSCSCKDYW 674
RFH F DG CSC DYW
Sbjct: 603 RTRFHHFRDGKCSCGDYW 620
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 5/308 (1%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+ +L+ AC A E+ ++HA + ++ N L++ YA G+ A LFD +
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
+ D SWN++I GY K G ++ A LF +M ++ SW ISGYV +EAL++F
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
MQ + N +L++ L+A A + L GK IH YL + + +D V+ L+D+Y KCG
Sbjct: 238 MQNSDVEPDN-VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
++EA +F + K V +WT +I G E S F ++ G++PN TFT VL
Sbjct: 297 EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 311 ACADHAAEHLGKEVHGYMMRVGYD--PGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPD 367
AC+ GK + Y M Y+ P +VDL + G A R ++P +P+
Sbjct: 357 ACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 368 LVSWTSLI 375
V W +L+
Sbjct: 416 AVIWGALL 423
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/539 (37%), Positives = 312/539 (57%), Gaps = 19/539 (3%)
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSH--GRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
A ++FD + F WN I +H R EA ++R M + S+ +K T L A
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKA 160
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSW 270
A I GK++H +V+ G D V + L+ LYG CG LD AR +FD+M ++ +VSW
Sbjct: 161 CAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSW 220
Query: 271 TTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR 330
+MI G + LFR++ S P+ YT VL ACA + LG H +++R
Sbjct: 221 NSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 331 ---VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRA 387
V ++L+++Y KCG+ ++A +VF + + DL SW ++I GFA +G+ + A
Sbjct: 280 KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEA 339
Query: 388 LHFFELLL--KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACV 445
++FF+ ++ + +P+ +TFVG+L AC H G V+KG +YF + + + +HY C+
Sbjct: 340 MNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCI 399
Query: 446 IDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG-NIELAKRAANALFEIEPEN 504
+DL+AR+G EA +++ +M +KPD +W SLL C G ++EL++ A + + +N
Sbjct: 400 VDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDN 459
Query: 505 PAT-------YITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVG 557
++ Y+ L+ +YA+A +W + VRK M GI K+PG S IEI H F G
Sbjct: 460 ESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAG 519
Query: 558 DTSHPKIRDIHEFLGELSKKMKEEGYVPDTNF--VLHDVEEEQKEQNLFYHSEKLAVAFG 615
DTSHP+ + I++ L + +++ GY+PD + ++ + KE +L HSE+LA+AFG
Sbjct: 520 DTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFG 579
Query: 616 IISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
+I+ PP TPI++FKNLR C DCH K SK+ +II+RD RFH F+DGSCSC DYW
Sbjct: 580 LINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 148/324 (45%), Gaps = 40/324 (12%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + ++ AC +G++VH F ++++N L+ LY CG L A+++
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV 208
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FDEM +R L SWN+MI + G + A +LF EM R
Sbjct: 209 FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR----------------------- 245
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR---AGLDLDEVVWSAL 242
S + +T+ S L+A A + L LG H +L+R + +D +V ++L
Sbjct: 246 ----------SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 295
Query: 243 LDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG--SGVRP 300
+++Y KCGSL A +F M +D+ SW MI GR EE + F ++ VRP
Sbjct: 296 IEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRP 355
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRV 359
N TF G+L AC + G++ M+R +P +VDL ++ G A +
Sbjct: 356 NSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDM 415
Query: 360 FNQIP-RPDLVSWTSLIGGFAQNG 382
+P +PD V W SL+ + G
Sbjct: 416 VMSMPMKPDAVIWRSLLDACCKKG 439
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 151/332 (45%), Gaps = 15/332 (4%)
Query: 221 KEIHGYLVRAGLDLDEV---VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
K++H + +R + ++ +L L ++ A +FD + + W T+I C
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 278 FED-GRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
D R+EE F L+R ++ G P+++TF VLKACA GK+VH +++ G+
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+ + L+ LY CG +A +VF+++P LVSW S+I + G+ D AL F +
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA--CVIDLLARSG 453
+S +PD T VLSAC G + G + K + D +I++ + G
Sbjct: 245 RS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 454 RFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA----KRAANALFEIEPENPATYI 509
AE + M K D W +++ G HG E A R + + P N T++
Sbjct: 304 SLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRP-NSVTFV 361
Query: 510 TLANIYANAGQWAEEAKVRKDMEIRGIVKKPG 541
L I N + + + DM +R +P
Sbjct: 362 GLL-IACNHRGFVNKGRQYFDMMVRDYCIEPA 392
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/523 (37%), Positives = 303/523 (57%), Gaps = 6/523 (1%)
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
LF +P D F +N+ I P + +R M S SN +T +S + + A +
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSN-YTFTSVIKSCADLS 121
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
LR+GK +H + V +G LD V +AL+ Y KCG ++ AR +FD+M +K +V+W +++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
++G +E +F + SG P+ TF +L ACA A LG VH Y++ G D
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
G+AL++LYS+CG+ A VF+++ ++ +WT++I + +G +A+ F +
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 396 KS-GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 454
G P+ +TFV VLSAC HAGLV++G + + + + L+ +H+ C++D+L R+G
Sbjct: 302 DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGF 361
Query: 455 FNEAENII---DNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITL 511
+EA I D LW ++LG C++H N +L A L +EP+NP ++ L
Sbjct: 362 LDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVML 421
Query: 512 ANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFL 571
+NIYA +G+ E + +R M + K+ G S IE++ + ++F +GD SH + +I+ +L
Sbjct: 422 SNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYL 481
Query: 572 GELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNL 631
L + KE GY P + V+H VEEE+KE L YHSEKLAVAFG++ T I + KNL
Sbjct: 482 ETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNL 540
Query: 632 RTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
R C DCH+A KY S + R+I +RD RFH F++GSCSC DYW
Sbjct: 541 RICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 44/346 (12%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
PS ++++I +C AL G+ VH S F ++ L+ Y+KCG + A+++
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FD M ++ + +WN++++G+ + G ++A ++F +M R F ++A
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM-RESGFEPDSA-------------- 209
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
T S L+A A + LG +H Y++ GLDL+ + +AL++L
Sbjct: 210 -----------------TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINL 252
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS-GVRPNEYT 304
Y +CG + +AR +FD+M + +V +WT MI G ++ LF + G PN T
Sbjct: 253 YSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVT 312
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
F VL ACA G+ V+ M + PG +VD+ + G A + +Q+
Sbjct: 313 FVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL 372
Query: 364 ------PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQ 403
P L WT+++G + D + + L+ +PD
Sbjct: 373 DATGKATAPAL--WTAMLGACKMHRNYDLGVEIAKRLI--ALEPDN 414
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQN 381
++VH +++ GY + L+ L +F +P PD + S+I ++
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 382 GQPDRALHFFELLLKSGTKPDQITFVGVLSACT--HAGLVDKGLEYFHSIKEKHGLMHTA 439
P + ++ +L S P TF V+ +C A + KG+ + H++ GL
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV-HCHAVVSGFGL---- 140
Query: 440 DHY--ACVIDLLARSGRFNEAENIIDNMSIKPDKFL--WASLLGGCRIHGNIELAKRAAN 495
D Y A ++ ++ G A + D M P+K + W SL+ G +G LA A
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRM---PEKSIVAWNSLVSGFEQNG---LADEAIQ 194
Query: 496 ALFEI-----EPENPATYITLANIYANAG 519
+++ EP++ AT+++L + A G
Sbjct: 195 VFYQMRESGFEPDS-ATFVSLLSACAQTG 222
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/639 (33%), Positives = 340/639 (53%), Gaps = 62/639 (9%)
Query: 68 PRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFD 127
P+L L+ +C L + +H ++ I +F+++RLL L
Sbjct: 14 PKL--ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCV------------- 55
Query: 128 EMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEM 187
D + T + GYA +F ++ + F +N I + + P +A
Sbjct: 56 ---DDSTFNKPTNLLGYA--------YGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGF 104
Query: 188 FRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYG 247
+ M K N T + A++ + C+ +G++ H +VR G D V ++L+ +Y
Sbjct: 105 YTQMLKSRIWPDN-ITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYA 163
Query: 248 KCGSLDEARGIFDQMVDKDVVSWTTMIH---RC--FEDGRR------------------- 283
CG + A IF QM +DVVSWT+M+ +C E+ R
Sbjct: 164 NCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMING 223
Query: 284 -------EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
E+ LF + GV NE V+ +CA A G+ + Y+++
Sbjct: 224 YAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVN 283
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
G+ALVD++ +CG+ + A VF +P D +SW+S+I G A +G +A+H+F ++
Sbjct: 284 LILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMIS 343
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
G P +TF VLSAC+H GLV+KGLE + ++K+ HG+ +HY C++D+L R+G+
Sbjct: 344 LGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLA 403
Query: 457 EAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYA 516
EAEN I M +KP+ + +LLG C+I+ N E+A+R N L +++PE+ Y+ L+NIYA
Sbjct: 404 EAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYA 463
Query: 517 NAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVG-DTSHPKIRDIHEFLGELS 575
AGQW + +R M+ + + K PG S IEI +++ F +G D HP++ I E+
Sbjct: 464 CAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEIL 523
Query: 576 KKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCV 635
K++ GY +T DV+EE+KE ++ HSEKLA+A+G++ T PGT I++ KNLR C
Sbjct: 524 GKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCE 583
Query: 636 DCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
DCHT K S++ R++I+RD NRFH F +G CSC+DYW
Sbjct: 584 DCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 222/451 (49%), Gaps = 17/451 (3%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + LI A + G + H+ F +++ N L+ +YA CG +A A R+
Sbjct: 115 PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F +MG RD+ SW +M+AGY K G +E AR++FDEMP R+ F+W+ I+GY + +A+
Sbjct: 175 FGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI 234
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
++F M K E +N+ + S +++ A + L G+ + Y+V++ + ++ ++ +AL+D+
Sbjct: 235 DLFEFM-KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDM 293
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
+ +CG +++A +F+ + + D +SW+++I G + F ++ G P + TF
Sbjct: 294 FWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTF 353
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASR-VFNQI 363
T VL AC+ G E++ M + G +P +VD+ + G A +
Sbjct: 354 TAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH 413
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLS---ACTHAGLVD 420
+P+ +L+G + A +L+K KP+ + +LS AC AG D
Sbjct: 414 VKPNAPILGALLGACKIYKNTEVAERVGNMLIK--VKPEHSGYYVLLSNIYAC--AGQWD 469
Query: 421 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
K +KEK L+ ++ +I++ + +F ++ + + + W +LG
Sbjct: 470 KIESLRDMMKEK--LVKKPPGWS-LIEIDGKINKFTMGDD-QKHPEMGKIRRKWEEILGK 525
Query: 481 CRIHGNIELAKRAANALFEIEPENPATYITL 511
R+ G +A F+++ E + I +
Sbjct: 526 IRLIG---YKGNTGDAFFDVDEEEKESSIHM 553
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 318/580 (54%), Gaps = 74/580 (12%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALTKSSNF 99
++ Q R +EA+ + + L ++++++AC + +G +VH+L S F
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPF 183
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ ++I + L+D+Y+KCG++ DAQR +FDE
Sbjct: 184 LSDVYIGSALVDMYSKCGNVNDAQR-------------------------------VFDE 212
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M R+ SWN+ I+ + +G EAL++F+MM + ++ TL+S ++A A++ +++
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV-EPDEVTLASVISACASLSAIKV 271
Query: 220 GKEIHGYLVRAG-LDLDEVVWSALLDLYGKCGSLDEARGIFD------------------ 260
G+E+HG +V+ L D ++ +A +D+Y KC + EAR IFD
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 331
Query: 261 -------------QMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG 307
+M +++VVSW +I ++G EE SLF L V P Y+F
Sbjct: 332 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 308 VLKACADHAAEHLGKEVHGYMMRVGYDPGS------FAGSALVDLYSKCGNTKIASRVFN 361
+LKACAD A HLG + H ++++ G+ S F G++L+D+Y KCG + VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 362 QIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
++ D VSW ++I GFAQNG + AL F +L+SG KPD IT +GVLSAC HAG V++
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC 481
G YF S+ G+ DHY C++DLL R+G EA+++I+ M ++PD +W SLL C
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 482 RIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPG 541
++H NI L K A L E+EP N Y+ L+N+YA G+W + VRK M G+ K+PG
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPG 631
Query: 542 KSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEE 581
SWI+I+ HVF+V D SHP+ + IH L L +M+ E
Sbjct: 632 CSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 249/469 (53%), Gaps = 49/469 (10%)
Query: 53 LKEAVDLLHHVDRPSPRLYSTLIAACVRHR-ALEQGRRVHALTKSSNFIPGIFISNRLLD 111
LK A DL D SP ++ L+ +C++ + + R VHA S F IFI NRL+D
Sbjct: 7 LKLAADLSSFTD-SSP--FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLID 63
Query: 112 LYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAA 171
Y+KCGSL D +++FD+M R++ +WN+++ G KLG+L++A LF MP RD +WN+
Sbjct: 64 AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 172 ISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAG 231
+SG+ H R EAL F MM K E N+++ +S L+A + + + G ++H + ++
Sbjct: 124 VSGFAQHDRCEEALCYFAMMHK-EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 182
Query: 232 LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE-DGRREEGFSLF 290
D + SAL+D+Y KCG++++A+ +FD+M D++VVSW ++I CFE +G E +F
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI-TCFEQNGPAVEALDVF 241
Query: 291 RDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG-YDPGSFAGSALVDLYSK 349
+ ++ S V P+E T V+ ACA +A +G+EVHG +++ +A VD+Y+K
Sbjct: 242 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Query: 350 CGNTKIASRVFNQIP-------------------------------RPDLVSWTSLIGGF 378
C K A +F+ +P ++VSW +LI G+
Sbjct: 302 CSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGY 361
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE-YFHSIKEKHGLMH 437
QNG+ + AL F LL + P +F +L AC + G++ + H + KHG
Sbjct: 362 TQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL--KHGFKF 419
Query: 438 TA----DHYA--CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+ D + +ID+ + G E + M ++ D W +++ G
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIG 467
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/511 (37%), Positives = 298/511 (58%), Gaps = 5/511 (0%)
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV 228
N I + P E +FR ++++ S +N + S L L G +IHG +
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 229 RAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFS 288
G D ++ + L+DLY C + +A +FD++ +D VSW + + R +
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 289 LFRDL---MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVD 345
LF + + V+P+ T L+ACA+ A GK+VH ++ G + LV
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVS 260
Query: 346 LYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
+YS+CG+ A +VF + ++VSWT+LI G A NG A+ F +LK G P++ T
Sbjct: 261 MYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKE-KHGLMHTADHYACVIDLLARSGRFNEAENIIDN 464
G+LSAC+H+GLV +G+ +F ++ + + HY CV+DLL R+ ++A ++I +
Sbjct: 321 LTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKS 380
Query: 465 MSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEE 524
M +KPD +W +LLG CR+HG++EL +R + L E++ E Y+ L N Y+ G+W +
Sbjct: 381 MEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKV 440
Query: 525 AKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYV 584
++R M+ + I KPG S IE++ VH F+V D SHP+ +I++ L E+++++K GYV
Sbjct: 441 TELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Query: 585 PDTNFVLHDVE-EEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKY 643
+ LH++E EE+K L YHSEKLA+AFGI+ TPPGT I+V KNLRTCVDCH K+
Sbjct: 501 AEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKF 560
Query: 644 TSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
S + R +I+RD +RFH F+ GSCSC D+W
Sbjct: 561 VSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 143/327 (43%), Gaps = 48/327 (14%)
Query: 67 SPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLF 126
+P S + C++ L G ++H S F+ + L+DLY+ C + DA ++F
Sbjct: 112 NPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVF 171
Query: 127 DEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALE 186
DE+ RD SWN + + Y + LFD+M + G V +P
Sbjct: 172 DEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKN--------DVDGCV---KP----- 215
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
+ T L A A + L GK++H ++ GL + + L+ +Y
Sbjct: 216 -------------DGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
+CGS+D+A +F M +++VVSWT +I +G +E F +++ G+ P E T T
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 307 GVLKACADHAAEHLGKEVHGYM----MRVG---YDPGSFAGSALVDLYSKCGNTKIASRV 359
G+L AC+ H G G M MR G P +VDL G ++ +
Sbjct: 323 GLLSACS-----HSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLL---GRARLLDKA 374
Query: 360 FNQIP----RPDLVSWTSLIGGFAQNG 382
++ I +PD W +L+G +G
Sbjct: 375 YSLIKSMEMKPDSTIWRTLLGACRVHG 401
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 75 IAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL 134
+ AC AL+ G++VH + + +SN L+ +Y++CGS+ A ++F M +R++
Sbjct: 224 LQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNV 283
Query: 135 CSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVS----HGRPREALEMFRM 190
SW +I+G A G+ ++A + F+EM + ++G +S G E + F
Sbjct: 284 VSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDR 343
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M+ E ++ +H Y ++DL G+
Sbjct: 344 MRSGE---------------------FKIKPNLHHY-------------GCVVDLLGRAR 369
Query: 251 SLDEARGIFDQM-VDKDVVSWTTMIHRCFEDGRREEG 286
LD+A + M + D W T++ C G E G
Sbjct: 370 LLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELG 406
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/569 (36%), Positives = 320/569 (56%), Gaps = 40/569 (7%)
Query: 53 LKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALTKSSNFI-PGIFISN 107
L +AV L + + RL ++L+ C ++L+QG+ +H K + F P +SN
Sbjct: 27 LSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSN 86
Query: 108 RLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFS 167
L+ +Y KCG DA ++FD+M R+L SWN M++GY K G L +AR +FD MP RD S
Sbjct: 87 HLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVS 146
Query: 168 WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
WN + GY G EAL ++ ++ N+F+ + L A L+L ++ HG +
Sbjct: 147 WNTMVIGYAQDGNLHEALWFYKEFRR-SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDV-------------------- 267
+ AG + V+ +++D Y KCG ++ A+ FD+M KD+
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 268 -----------VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
VSWT +I G LFR ++ GV+P ++TF+ L A A A
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLI 375
+ GKE+HGYM+R P + S+L+D+YSK G+ + + RVF + D V W ++I
Sbjct: 326 SLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMI 385
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
AQ+G +AL + ++K +P++ T V +L+AC+H+GLV++GL +F S+ +HG+
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI 445
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAAN 495
+ +HYAC+IDLL R+G F E I+ M +PDK +W ++LG CRIHGN EL K+AA+
Sbjct: 446 VPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAD 505
Query: 496 ALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFL 555
L +++PE+ A YI L++IYA+ G+W K+R M+ R + K+ SWIEI+++V F
Sbjct: 506 ELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFT 565
Query: 556 VGDTSHPKIR--DIHEFLGELSKKMKEEG 582
V D SH R +I+ L L+ ++EE
Sbjct: 566 VSDGSHAHARKEEIYFILHNLAAVIEEEA 594
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/613 (35%), Positives = 331/613 (53%), Gaps = 47/613 (7%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P +++I+AC GR +HA ++ F I + N L +Y GS
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS------- 347
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
W E A KLF M R+D SW ISGY + P +A+
Sbjct: 348 -----------------------WRE-AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+ +RMM + +S ++ T+++ L+A A + L G E+H ++A L +V + L+++
Sbjct: 384 DTYRMMDQ-DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMI------HRCFEDGRREEGFSLFRDLMGSGVR 299
Y KC +D+A IF + K+V+SWT++I +RCFE +F M ++
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA-------LIFLRQMKMTLQ 495
Query: 300 PNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRV 359
PN T T L ACA A GKE+H +++R G F +AL+D+Y +CG A
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 360 FNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLV 419
FN + D+ SW L+ G+++ GQ + F+ ++KS +PD+ITF+ +L C+ + +V
Sbjct: 556 FNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 420 DKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLG 479
+GL YF + E +G+ HYACV+DLL R+G EA I M + PD +W +LL
Sbjct: 615 RQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLN 673
Query: 480 GCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKK 539
CRIH I+L + +A +FE++ ++ YI L N+YA+ G+W E AKVR+ M+ G+
Sbjct: 674 ACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733
Query: 540 PGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQK 599
G SW+E+K +VH FL D HP+ ++I+ L +KM E G + D E +
Sbjct: 734 AGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISR 793
Query: 600 EQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNR 659
++ HSE+ A+AFG+I+T PG PI V KNL C +CH +K+ SK V+R+I +RD+
Sbjct: 794 DEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEH 853
Query: 660 FHCFEDGSCSCKD 672
FH F+DG CSC D
Sbjct: 854 FHHFKDGECSCGD 866
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 223/445 (50%), Gaps = 37/445 (8%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
++ LC +L+EA+ LL+ + ++ L+ C RA E+G +V+++ SS
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
G+ + N L ++ + G+L DA W +F +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDA--------------------------WY-----VFGK 154
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M R+ FSWN + GY G EA+ ++ M + +T L IP L
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
GKE+H ++VR G +LD V +AL+ +Y KCG + AR +FD+M +D++SW MI FE
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
+G EG LF + G V P+ T T V+ AC LG+++H Y++ G+
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
++L +Y G+ + A ++F+++ R D+VSWT++I G+ N PD+A+ + ++ +
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSV 394
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
KPD+IT VLSAC G +D G+E H + K L+ +I++ ++ ++A
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVE-LHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIH 484
+I N+ + + W S++ G R++
Sbjct: 454 DIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 37/300 (12%)
Query: 274 IHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
+H +G+ EE L + V +E F +++ C A+ G +V+ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF-E 392
G G+A + ++ + GN A VF ++ +L SW L+GG+A+ G D A+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 393 LLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARS 452
+L G KPD TF VL C + +G E H ++G D +I + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKE-VHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 453 GRFNEAENIIDNM----------------------------------SIKPDKFLWASLL 478
G A + D M S+ PD S++
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 479 GGCRIHGNIELAKRA-ANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
C + G+ L + A + + + +L +Y NAG W E K+ ME + IV
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 335/647 (51%), Gaps = 81/647 (12%)
Query: 74 LIAACVRHRALEQGRRVHALTKSSNF--IPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
L+ C L G+ +HA+ +S P ++SN L YA G + AQ
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQ-------- 63
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMP--RRDHFSWNAAISGYVSHGRPREALEMFR 189
KLFDE+P +D+ W +S + +G ++++F
Sbjct: 64 -----------------------KLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFV 100
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
M++ + + ++ A + L ++ HG V+ G+ V +AL+D+YGKC
Sbjct: 101 EMRR-KRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKC 159
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL---------------M 294
G + E + IF+++ +K VVSWT ++ + E G +F ++ +
Sbjct: 160 GLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYL 219
Query: 295 GSGVRP-----------------NEYTFTGVLKACADHAAEHLGKEVHGYMMR------- 330
G+G N T +L ACA +G+ VH Y ++
Sbjct: 220 GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 331 -VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALH 389
YD G+ALVD+Y+KCGN + VF + + ++V+W +L G A +G+ +
Sbjct: 280 EASYDD-VMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVID 338
Query: 390 FFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 449
F +++ KPD +TF VLSAC+H+G+VD+G FHS++ +GL DHYAC++DLL
Sbjct: 339 MFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLL 396
Query: 450 ARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYI 509
R+G EAE ++ M + P++ + SLLG C +HG +E+A+R L ++ P N I
Sbjct: 397 GRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQI 456
Query: 510 TLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHE 569
++N+Y G+ +R + RGI K PG S I + VH F GD SHP+ ++I+
Sbjct: 457 LMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYL 516
Query: 570 FLGELSKKMKEEGYVPDTNFVLHDVEE--EQKEQNLFYHSEKLAVAFGIISTPPGTPIKV 627
L E+ ++++ GYVPD + ++ E E+KEQ L HSEKLAV FG++ T P TP+ V
Sbjct: 517 KLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLV 576
Query: 628 FKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
FKNLR C DCH+AMK SK+ R+II+RD NRFH F+ GSCSC DYW
Sbjct: 577 FKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/539 (37%), Positives = 298/539 (55%), Gaps = 42/539 (7%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
T+I Y G +E ARK+FDEM + + +WNA I+ A E+F M
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKM------ 198
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
LVR + W+ +L Y K G L+ A+
Sbjct: 199 -----------------------------LVR-----NHTSWNVMLAGYIKAGELESAKR 224
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
IF +M +D VSW+TMI +G E F FR+L +G+ PNE + TGVL AC+ +
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPD-LVSWTSLIG 376
GK +HG++ + GY +AL+D+YS+CGN +A VF + +VSWTS+I
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G A +GQ + A+ F + G PD I+F+ +L AC+HAGL+++G +YF +K + +
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 404
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
+HY C++DL RSG+ +A + I M I P +W +LLG C HGNIELA++
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 464
Query: 497 LFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLV 556
L E++P N + L+N YA AG+W + A +RK M ++ I K S +E+ + ++ F
Sbjct: 465 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 524
Query: 557 GDTSHPKIRDIHEFLGELSKKMKEE-GYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFG 615
G+ + HE L E+ ++K+E GY P+ L+DVEEE+KE + HSEKLA+AF
Sbjct: 525 GEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFA 584
Query: 616 IISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
+ G I++ KNLR C DCH MK TSK+ +I++RD NRFH F+DGSCSC+DYW
Sbjct: 585 LARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 167/355 (47%), Gaps = 33/355 (9%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P ++ +I A R+L G ++H +F+ L+ +Y CG + A+++
Sbjct: 104 PDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKV 163
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FDEM +L +WN +I + + AR++FD+M R+H SWN ++GY+ G A
Sbjct: 164 FDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAK 223
Query: 186 EMFRMMQ--------------KHESS----------------NSNKFTLSSGLAAAAAIP 215
+F M H S + N+ +L+ L+A +
Sbjct: 224 RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD-VVSWTTMI 274
GK +HG++ +AG V +AL+D+Y +CG++ AR +F+ M +K +VSWT+MI
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY- 333
G+ EE LF ++ GV P+ +F +L AC+ G++ M RV +
Sbjct: 344 AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRA 387
+P +VDLY + G + A Q+P P + W +L+G + +G + A
Sbjct: 404 EPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELA 458
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 147/369 (39%), Gaps = 67/369 (18%)
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALL--DLYGKCGSLDEARGIFDQMVDKDVVSWTTMI 274
LR +IHG ++ G+D D L+ +L AR + + D + T++
Sbjct: 18 LRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 275 HRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
E ++F ++M G V P+ ++F V+KA + + G ++H ++ G
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL 393
+ F G+ L+ +Y CG + A +VF+++ +P+LV+W ++I + A F+
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 394 LL---------------KSG------------TKPDQITFVGVLSACTHAGLVDKGLEYF 426
+L K+G D +++ ++ H G ++ YF
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 427 HSIKEK----------------------------HGLMHTADHYACV------IDLLARS 452
++ HG + A + V ID+ +R
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 453 GRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL--FEIEPENPATYIT 510
G A + + M K W S++ G +HG E A R N + + + P+ ++I+
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDG-ISFIS 376
Query: 511 LANIYANAG 519
L + ++AG
Sbjct: 377 LLHACSHAG 385
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 296/540 (54%), Gaps = 44/540 (8%)
Query: 139 TMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKH 194
+++ YAK G L+ A ++F+E P R WN I+GY A +FR M +
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 195 ESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDE 254
S + WS L+ Y G L+
Sbjct: 226 NSGS----------------------------------------WSTLIKGYVDSGELNR 245
Query: 255 ARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACAD 314
A+ +F+ M +K+VVSWTT+I+ + G E S + +++ G++PNEYT VL AC+
Sbjct: 246 AKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSK 305
Query: 315 HAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSL 374
A G +HGY++ G G+ALVD+Y+KCG A+ VF+ + D++SWT++
Sbjct: 306 SGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAM 365
Query: 375 IGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
I G+A +G+ +A+ F ++ SG KPD++ F+ VL+AC ++ VD GL +F S++ +
Sbjct: 366 IQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYA 425
Query: 435 LMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAA 494
+ T HY V+DLL R+G+ NEA +++NM I PD WA+L C+ H A+ +
Sbjct: 426 IEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVS 485
Query: 495 NALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVF 554
L E++PE +YI L +A+ G + K R ++ R + G S+IE+ Q++ F
Sbjct: 486 QNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKF 545
Query: 555 LVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAF 614
GD SH ++I L E+ ++GY P ++ +HD+EEE+KE HSEKLA+
Sbjct: 546 SAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTL 605
Query: 615 GIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
G + T PGT I++ KNLR C DCH+ MKY SKI QR I+LRD+ +FH F+DG CSC DYW
Sbjct: 606 GFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 156/325 (48%), Gaps = 38/325 (11%)
Query: 87 GRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIA 142
GR +HA T + F+ L+D+YAK G L A ++F+E DR + WN +I
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 143 GYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQK--------- 193
GY + + A LF MP R+ SW+ I GYV G A ++F +M +
Sbjct: 205 GYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTL 264
Query: 194 ---------HESSNS------------NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL 232
+E++ S N++T+++ L+A + L G IHGY++ G+
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 233 DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
LD + +AL+D+Y KCG LD A +F M KD++SWT MI GR + FR
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQ 384
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY--DPGSFAGSALVDLYSKC 350
+M SG +P+E F VL AC + + LG MR+ Y +P +VDL +
Sbjct: 385 MMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFD-SMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 351 GNTKIASRVFNQIP-RPDLVSWTSL 374
G A + +P PDL +W +L
Sbjct: 444 GKLNEAHELVENMPINPDLTTWAAL 468
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 144/362 (39%), Gaps = 70/362 (19%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
+ +H ++R G+ L V + L+ S D + IF +++ +I E+
Sbjct: 46 RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTEN 104
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
R E F ++ GV+P+ TF VLK+ + LG+ +H ++ D SF
Sbjct: 105 ARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVR 164
Query: 341 SALVDLYSKCGNTK-----------------------------------IASRVFNQIPR 365
+LVD+Y+K G K +A+ +F +P
Sbjct: 165 LSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE 224
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFEL-------------------------------L 394
+ SW++LI G+ +G+ +RA FEL +
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 395 LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 454
L+ G KP++ T VLSAC+ +G + G+ H +G+ ++D+ A+ G
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIR-IHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 455 FNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANI 514
+ A + NM+ K D W +++ G +HG A + + E P + LA +
Sbjct: 344 LDCAATVFSNMNHK-DILSWTAMIQGWAVHGRFHQAIQCFRQMM-YSGEKPDEVVFLAVL 401
Query: 515 YA 516
A
Sbjct: 402 TA 403
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 52/259 (20%)
Query: 44 INALCQQKRLKEAV----DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
IN Q + A+ ++L +P+ + +++AC + AL G R+H +
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
I L+D+YAKCG L A +F M +D+ SW MI G+A
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWA-------------- 370
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
HGR +A++ FR MM E + F A CL
Sbjct: 371 -----------------VHGRFHQAIQCFRQMMYSGEKPDEVVFL-------AVLTACLN 406
Query: 219 LGKEIHGYLVRAGLDLDEVV------WSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWT 271
+ G + LD + + ++DL G+ G L+EA + + M ++ D+ +W
Sbjct: 407 SSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWA 466
Query: 272 TMIHRC--FEDGRREEGFS 288
+ C + RR E S
Sbjct: 467 ALYRACKAHKGYRRAESVS 485
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 295/558 (52%), Gaps = 32/558 (5%)
Query: 149 WLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKFTLSSG 207
+L+ A ++ D + F+ N+ I + P ++ + +R ++ + +T++
Sbjct: 55 YLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDE------------- 254
+ A + G ++HG +R G D D V + L+ LY + G LD
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 255 ------------------ARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS 296
AR +F+ M ++D ++W MI + G E ++F +
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 297 GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIA 356
GV+ N VL AC A G+ H Y+ R + LVDLY+KCG+ + A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 357 SRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHA 416
VF + ++ +W+S + G A NG ++ L F L+ + G P+ +TFV VL C+
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 417 GLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWAS 476
G VD+G +F S++ + G+ +HY C++DL AR+GR +A +II M +KP +W+S
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 477 LLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
LL R++ N+EL A+ + E+E N Y+ L+NIYA++ W + VR+ M+ +G+
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 537 VKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEE 596
K+PG S +E+ +VH F VGD SHPK I ++S++++ GY DT V+ D++E
Sbjct: 475 RKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDE 534
Query: 597 EQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRD 656
E+KE L HSEK A+AFGI+S PI++ KNLR C DCH SKI R+II+RD
Sbjct: 535 EEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRD 594
Query: 657 SNRFHCFEDGSCSCKDYW 674
NRFH F+DG CSC +W
Sbjct: 595 RNRFHHFKDGHCSCNGFW 612
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 156/314 (49%), Gaps = 5/314 (1%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P + L+ AC R E G +VH +T F + L+ LYA+ G L +
Sbjct: 105 KPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHK 164
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+F+ + D M+ A+ G + ARKLF+ MP RD +WNA ISGY G REA
Sbjct: 165 VFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREA 224
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L +F +MQ E N + S L+A + L G+ H Y+ R + + + + L+D
Sbjct: 225 LNVFHLMQL-EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
LY KCG +++A +F M +K+V +W++ ++ +G E+ LF + GV PN T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMR--VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
F VL+ C+ G+ H MR G +P LVDLY++ G + A + Q
Sbjct: 344 FVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQ 402
Query: 363 IP-RPDLVSWTSLI 375
+P +P W+SL+
Sbjct: 403 MPMKPHAAVWSSLL 416
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/645 (31%), Positives = 352/645 (54%), Gaps = 16/645 (2%)
Query: 43 AINALCQQKRLKEAVDLLHHVDRPS-----PRLYSTLIAACVRHRALEQGRRVHALTKSS 97
+++L ++ + +A DL + ++R STL+++C L +GR +H
Sbjct: 255 VVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI 314
Query: 98 NFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
+ + ++N L+ Y+K + + L++ M +D ++ MI Y G ++ A ++F
Sbjct: 315 GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF 374
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKFTLSSGLAAAAAIPC 216
+ ++ ++NA ++G+ +G +AL++F M+Q+ F+L+S + A +
Sbjct: 375 ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR--GVELTDFSLTSAVDACGLVSE 432
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM---VDKDVVSWTTM 273
++ ++IHG+ ++ G + + +ALLD+ +C + +A +FDQ +D + T++
Sbjct: 433 KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKAT-TSI 491
Query: 274 IHRCFEDGRREEGFSLF-RDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG 332
I +G ++ SLF R L + +E + T +L C +G ++H Y ++ G
Sbjct: 492 IGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAG 551
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFE 392
Y G++L+ +Y+KC ++ A ++FN + D++SW SLI + D AL +
Sbjct: 552 YFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWS 611
Query: 393 LLLKSGTKPDQITFVGVLSAC--THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLA 450
+ + KPD IT V+SA T + + + F S+K + + T +HY + +L
Sbjct: 612 RMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLG 671
Query: 451 RSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYIT 510
G EAE+ I++M ++P+ + +LL CRIH N +AKR A + +PE P+ YI
Sbjct: 672 HWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYIL 731
Query: 511 LANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEF 570
+NIY+ +G W +R++M RG K P KSWI + ++H F DTSHP+ +DI+
Sbjct: 732 KSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRG 791
Query: 571 LGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPP-GTPIKVFK 629
L L + + GY P+T +VL +V+E K+ LF+HS KLAV +GI+S+ G P++V K
Sbjct: 792 LEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMK 851
Query: 630 NLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
N+ C DCH KY S +V+R+I+LRDS+ FH F +G CSC+D W
Sbjct: 852 NVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 221/502 (44%), Gaps = 78/502 (15%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAK--CGSLADA 122
+P+ + ++ ACVR G ++H L S F+ +F+SN L+ LY K S D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 123 QRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPR 182
+LFDE+ RD+ SWNT+++ K G +A LF EM R + F ++
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDS------------ 285
Query: 183 EALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSAL 242
FTLS+ L++ L G+E+HG +R GL + V +AL
Sbjct: 286 -------------------FTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNAL 326
Query: 243 LDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI--HRCF---------------------- 278
+ Y K + + +++ M+ +D V++T MI + F
Sbjct: 327 IGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYN 386
Query: 279 -------EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV 331
+G + LF D++ GV +++ T + AC + + + +++HG+ ++
Sbjct: 387 ALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKF 446
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR--PDLVSWTSLIGGFAQNGQPDRALH 389
G +AL+D+ ++C A +F+Q P + TS+IGG+A+NG PD+A+
Sbjct: 447 GTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVS 506
Query: 390 FF-ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDL 448
F L + D+++ +L+ C G + G + H K G +I +
Sbjct: 507 LFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ-IHCYALKAGYFSDISLGNSLISM 565
Query: 449 LARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI---HGNIELAKRAANALFEIEPENP 505
A+ ++A I + M + D W SL+ C I +G+ LA + EI+P+
Sbjct: 566 YAKCCDSDDAIKIFNTMR-EHDVISWNSLI-SCYILQRNGDEALALWSRMNEKEIKPD-- 621
Query: 506 ATYITLANIYANAGQWAEEAKV 527
I + +A ++ E K+
Sbjct: 622 ---IITLTLVISAFRYTESNKL 640
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 43/365 (11%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N +I+ Y KLG+ +A +F + S+ A ISG+ EAL++F M+K
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK--CGSLDEA 255
N++T + L A + LG +IHG +V++G V ++L+ LY K S D+
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 256 RGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL---MGSGVRPNEYTFTGVLKAC 312
+FD++ +DV SW T++ ++G+ + F LF ++ G GV + +T + +L +C
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV--DSFTLSTLLSSC 295
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSK----------------------- 349
D + G+E+HG +R+G +AL+ YSK
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 350 --------CGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
G A +F + + +++ +L+ GF +NG +AL F +L+ G +
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 402 DQITFVGVLSACTHAGLVD--KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
+ + AC GLV K E H K G ++D+ R R +AE
Sbjct: 416 TDFSLTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAE 472
Query: 460 NIIDN 464
+ D
Sbjct: 473 EMFDQ 477
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
F +L+ A + + K VH +++ + G+AL+ Y K G + A VF +
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRL-GNALISTYLKLGFPREAILVFVSLS 141
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG-TKPDQITFVGVLSACTHAGLVDKGL 423
P +VS+T+LI GF++ AL F + K+G +P++ TFV +L+AC G+
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 424 EYFHSIKEKHGLMHTA 439
+ H + K G +++
Sbjct: 202 Q-IHGLIVKSGFLNSV 216
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 296/528 (56%), Gaps = 33/528 (6%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P +S+L+ + + LE +++H + IF+++ L+D Y KC ++ AQ +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F + D+ + M ISGY+ +G ++L
Sbjct: 398 FSQCNSVDVVVFTAM-------------------------------ISGYLHNGLYIDSL 426
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
EMFR + K + S N+ TL S L + L+LG+E+HG++++ G D + A++D+
Sbjct: 427 EMFRWLVKVKIS-PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KCG ++ A IF+++ +D+VSW +MI RC + +FR + SG+ + +
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+ L ACA+ +E GK +HG+M++ ++ S L+D+Y+KCGN K A VF +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
++VSW S+I +G+ +L F E++ KSG +PDQITF+ ++S+C H G VD+G+
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
+F S+ E +G+ +HYACV+DL R+GR EA + +M PD +W +LLG CR+H
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
N+ELA+ A++ L +++P N Y+ ++N +ANA +W KVR M+ R + K PG SW
Sbjct: 726 KNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785
Query: 545 IEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLH 592
IEI ++ H+F+ GD +HP+ I+ L L +++ EGY+P LH
Sbjct: 786 IEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 198/423 (46%), Gaps = 34/423 (8%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + +++ C ++ G ++H L S I N LL +Y+KCG DA +L
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F M D +WN MI+GY + G +E++ F EM +S G +A+
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM---------------ISSGVLPDAI 341
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
T SS L + + L K+IH Y++R + LD + SAL+D
Sbjct: 342 -----------------TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KC + A+ IF Q DVV +T MI +G + +FR L+ + PNE T
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+L A LG+E+HG++++ G+D G A++D+Y+KCG +A +F ++ +
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK 504
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
D+VSW S+I AQ+ P A+ F + SG D ++ LSAC + G +
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG-KA 563
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
H KH L + +ID+ A+ G A N+ M K + W S++ C HG
Sbjct: 564 IHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHG 622
Query: 486 NIE 488
++
Sbjct: 623 KLK 625
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 173/344 (50%), Gaps = 3/344 (0%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
+++I Y + G ++ KLFD + ++D WN ++GY G ++ F +M+ + S
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
N T L+ A+ + LG ++HG +V +G+D + + ++LL +Y KCG D+A
Sbjct: 237 -PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+F M D V+W MI + G EE + F +++ SGV P+ TF+ +L + +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
K++H Y+MR F SAL+D Y KC +A +F+Q D+V +T++I G
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+ NG +L F L+K P++IT V +L + G E H K G +
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE-LHGFIIKKGFDN 474
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC 481
+ VID+ A+ GR N A I + +S K D W S++ C
Sbjct: 475 RCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 189/420 (45%), Gaps = 46/420 (10%)
Query: 68 PRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFD 127
PR S L+ AC L QG++VHA ++ + R+L +YA CGS +D ++F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 128 EMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEM 187
+ R R WN+ IS +V +G +AL
Sbjct: 95 RLDLR-----------------------------RSSIRPWNSIISSFVRNGLLNQALAF 125
Query: 188 -FRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
F+M+ S + + F + A A+ + + + G+D +E V S+L+ Y
Sbjct: 126 YFKMLCFGVSPDVSTFPCL--VKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAY 183
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMIH---RCFEDGRREEGFSLFRDLMGSGVRPNEY 303
+ G +D +FD+++ KD V W M++ +C +GFS+ R + PN
Sbjct: 184 LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR---MDQISPNAV 240
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
TF VL CA LG ++HG ++ G D ++L+ +YSKCG AS++F +
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
R D V+W +I G+ Q+G + +L FF ++ SG PD ITF +L + + + L
Sbjct: 301 SRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF----ENL 356
Query: 424 EY---FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
EY H +H + + +ID + + A+NI + D ++ +++ G
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN-SVDVVVFTAMISG 415
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 308/586 (52%), Gaps = 68/586 (11%)
Query: 58 DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCG 117
DL ++ + + +++ AC A G +VH S F I++ + L+D+YAKC
Sbjct: 217 DLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCR 276
Query: 118 SLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVS 177
+ E AR L + M D SWN+ I G V
Sbjct: 277 EM-------------------------------ESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAA-AAAIPCLRLGKEIHGYLVRAGLDLDE 236
G EAL MF M + + + FT+ S L A + +++ H +V+ G +
Sbjct: 306 QGLIGEALSMFGRMHERDM-KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 237 VVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS 296
+V +AL+D+Y K G +D A +F+ M++KDV+SWT ++ +G +E LF ++
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 297 GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIA 356
G+ P++ VL A A+ G++VHG ++ G+ ++LV +Y+KCG+ + A
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 357 SRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHA 416
+ +FN + DL++WT LI G+A+NG
Sbjct: 485 NVIFNSMEIRDLITWTCLIVGYAKNG---------------------------------- 510
Query: 417 GLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWAS 476
L++ YF S++ +G+ +HYAC+IDL RSG F + E ++ M ++PD +W +
Sbjct: 511 -LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKA 569
Query: 477 LLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
+L R HGNIE +RAA L E+EP N Y+ L+N+Y+ AG+ E A VR+ M+ R I
Sbjct: 570 ILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
Query: 537 VKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEE 596
K+PG SW+E K +VH F+ D HP++ +I+ + E+ +KE GY D +F LHD+++
Sbjct: 630 SKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDK 689
Query: 597 EQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMK 642
E KE L YHSEKLAVAFG++ P G PI++ KNLR C DCH+AMK
Sbjct: 690 EGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMK 735
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 225/468 (48%), Gaps = 37/468 (7%)
Query: 106 SNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDH 165
SN LL +K G + +A+++FD+M +RD +WNTMI Y+ L A KLF P ++
Sbjct: 31 SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNT 90
Query: 166 FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHG 225
SWNA ISGY G EA +F MQ + N++TL S L ++ L G++IHG
Sbjct: 91 ISWNALISGYCKSGSKVEAFNLFWEMQS-DGIKPNEYTLGSVLRMCTSLVLLLRGEQIHG 149
Query: 226 YLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV-DKDVVSWTTMIHRCFEDGRRE 284
+ ++ G DLD V + LL +Y +C + EA +F+ M +K+ V+WT+M+ ++G
Sbjct: 150 HTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAF 209
Query: 285 EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV 344
+ FRDL G + N+YTF VL ACA +A +G +VH +++ G+ + SAL+
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 345 DLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
D+Y+KC + A + + D+VSW S+I G + G AL F + + K D
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 405 TFVGVL------------SACTHAGLVDKGLEYFHSIKE-------KHGLMHTA------ 439
T +L ++ H +V G + + K G+M +A
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 440 ------DHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELA 490
+ ++ +G ++EA + NM I PDK + AS+L +E
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 491 KRA-ANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
++ N + P + + +L +Y G + + MEIR ++
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI 497
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKS 96
N +++EA+ C + P + +++++A LE G++VH
Sbjct: 408 NGSYDEALKLFCNMRVGGIT---------PDKIVTASVLSASAELTLLEFGQQVHGNYIK 458
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
S F + ++N L+ +Y KCGSL DA +F+ M RDL +W +I GYAK G LE A++
Sbjct: 459 SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRY 518
Query: 157 FDEM 160
FD M
Sbjct: 519 FDSM 522
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/533 (36%), Positives = 299/533 (56%), Gaps = 40/533 (7%)
Query: 54 KEAVDLLHHVDR--PSPRLY--STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRL 109
KEA++L + + P +Y S+++ +C AL G +VHA T +N +++N L
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSL 391
Query: 110 LDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWN 169
+D+YAKC L D ARK+FD D +N
Sbjct: 392 IDMYAKCDCLTD-------------------------------ARKVFDIFAAADVVLFN 420
Query: 170 AAISGYVSHGRP---REALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGY 226
A I GY G EAL +FR M + + T S L A+A++ L L K+IHG
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 227 LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEG 286
+ + GL+LD SAL+D+Y C L ++R +FD+M KD+V W +M + EE
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
+LF +L S RP+E+TF ++ A + A+ LG+E H +++ G + + +AL+D+
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y+KCG+ + A + F+ D+V W S+I +A +G+ +AL E ++ G +P+ ITF
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
VGVLSAC+HAGLV+ GL+ F + + G+ +HY C++ LL R+GR N+A +I+ M
Sbjct: 660 VGVLSACSHAGLVEDGLKQFE-LMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAK 526
KP +W SLL GC GN+ELA+ AA +P++ ++ L+NIYA+ G W E K
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 527 VRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMK 579
VR+ M++ G+VK+PG+SWI I ++VH+FL D SH K I+E L +L +++
Sbjct: 779 VRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 221/459 (48%), Gaps = 40/459 (8%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + ST+++AC LE G+++HA + N L+D Y KCG + A +L
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F+ M ++++ SW T+++GY + + +EA+
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQ-------------------------------NALHKEAM 335
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
E+F M K + + SS L + A++ L G ++H Y ++A L D V ++L+D+
Sbjct: 336 ELFTSMSKF-GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIH---RCFEDGRREEGFSLFRDLMGSGVRPNE 302
Y KC L +AR +FD DVV + MI R E ++FRD+ +RP+
Sbjct: 395 YAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
TF +L+A A + L K++HG M + G + FAGSAL+D+YS C K + VF++
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 363 IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
+ DLV W S+ G+ Q + + AL+ F L S +PD+ TF +++A + V G
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 423 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCR 482
E FH K GL ++D+ A+ G +A D+ + + D W S++
Sbjct: 575 QE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-DVVCWNSVISSYA 632
Query: 483 IHGNIELAKRAANALFE--IEPENPATYITLANIYANAG 519
HG + A + + IEP N T++ + + ++AG
Sbjct: 633 NHGEGKKALQMLEKMMSEGIEP-NYITFVGVLSACSHAG 670
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 180/349 (51%), Gaps = 12/349 (3%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N +I Y++ G + ARK+F++MP R+ SW+ +S HG E+L +F +
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGK------EIHGYLVRAGLDLDEVVWSALLDLYGKCGS 251
+ N++ LSS + A + + G+ ++ +LV++G D D V + L+D Y K G+
Sbjct: 143 SPNEYILSSFIQACSGLD----GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 252 LDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA 311
+D AR +FD + +K V+WTTMI C + GR LF LM V P+ Y + VL A
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 312 CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSW 371
C+ GK++H +++R G + + + L+D Y KCG A ++FN +P +++SW
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISW 318
Query: 372 TSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKE 431
T+L+ G+ QN A+ F + K G KPD +L++C + G + H+
Sbjct: 319 TTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ-VHAYTI 377
Query: 432 KHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
K L + + +ID+ A+ +A + D + D L+ +++ G
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA-AADVVLFNAMIEG 425
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 205/398 (51%), Gaps = 14/398 (3%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
DRD+ +I Y K G ++ AR +FD +P + +W ISG V GR +L++F
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
+ + ++ + + LS+ L+A + +P L GK+IH +++R GL++D + + L+D Y KCG
Sbjct: 240 LME-DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
+ A +F+ M +K+++SWTT++ ++ +E LF + G++P+ Y + +L
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
+CA A G +VH Y ++ S+ ++L+D+Y+KC A +VF+ D+V
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418
Query: 371 WTSLIGGFAQNG---QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL-EYF 426
+ ++I G+++ G + AL+ F + +P +TFV +L A A L GL +
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLSKQI 476
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
H + K+GL + +ID+ + ++ + D M +K D +W S+ G
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQSE 535
Query: 487 IELAKRAANALFEIE--PENPATYITLANIYANAGQWA 522
E A N E++ E P + T AN+ AG A
Sbjct: 536 NE---EALNLFLELQLSRERPDEF-TFANMVTAAGNLA 569
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 172/368 (46%), Gaps = 37/368 (10%)
Query: 38 NNFEEAINALCQQKRLKEAV----DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHAL 93
N E + L Q L EA+ D+ + RPS + +L+ A +L +++H L
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQA 153
IF + L+D+Y+ C L D++ +FDEM +DL WN+M AGY + E+A
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 154 RKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAA 213
LF E+ +S RP E FT ++ + AA
Sbjct: 540 LNLFLELQ--------------LSRERPDE------------------FTFANMVTAAGN 567
Query: 214 IPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTM 273
+ ++LG+E H L++ GL+ + + +ALLD+Y KCGS ++A FD +DVV W ++
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 274 IHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
I G ++ + +M G+ PN TF GVL AC+ G + M+R G
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGI 687
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFE 392
+P + +V L + G A + ++P +P + W SL+ G A+ G + A H E
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE 747
Query: 393 LLLKSGTK 400
+ + S K
Sbjct: 748 MAILSDPK 755
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 9/263 (3%)
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
+HG ++ GL+LD + + L++LY + G + AR +F++M ++++VSW+TM+ C G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 283 REEGFSLFRDLMGSGV-RPNEYTFTGVLKACA--DHAAEHLGKEVHGYMMRVGYDPGSFA 339
EE +F + + PNEY + ++AC+ D + ++ ++++ G+D +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
G+ L+D Y K GN A VF+ +P V+WT++I G + G+ +L F L++
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
PD VLSAC+ ++ G + H+ ++GL A +ID + GR A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGG-KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 460 NIIDNMSIKPDKFL--WASLLGG 480
+ + M P+K + W +LL G
Sbjct: 305 KLFNGM---PNKNIISWTTLLSG 324
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 11/183 (6%)
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
F +L+ A H VHG ++ G + ++ + L++LYS+ G A +VF ++P
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 365 RPDLVSWTSLIGGFAQNGQPDRAL-HFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG- 422
+LVSW++++ +G + +L F E P++ + AC+ GL +G
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 423 --LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDK--FLWASLL 478
+ S K G +ID + G + A + D + P+K W +++
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDAL---PEKSTVTWTTMI 221
Query: 479 GGC 481
GC
Sbjct: 222 SGC 224
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 309/543 (56%), Gaps = 5/543 (0%)
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
D+ +++ Y+K G + A ++F+ M +R+ +WN I Y +GR +A F+ M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
+ + T + L A+A + G+ IHGY +R G V+ +AL+D+YG+CG L
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
A IFD+M +K+V+SW ++I ++G+ LF++L S + P+ T +L A
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAY 441
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
A+ + G+E+H Y+++ Y + ++LV +Y+ CG+ + A + FN I D+VSW
Sbjct: 442 AESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWN 501
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
S+I +A +G ++ F ++ S P++ TF +L+AC+ +G+VD+G EYF S+K +
Sbjct: 502 SIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKRE 561
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKR 492
+G+ +HY C++DL+ R+G F+ A+ ++ M P +W SLL R H +I +A+
Sbjct: 562 YGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEF 621
Query: 493 AANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVH 552
AA +F++E +N Y+ L N+YA AG+W + +++ ME +GI + +S +E K + H
Sbjct: 622 AAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSH 681
Query: 553 VFLVGDTSHPKIRDIHEFLGELSKKMKEEG-YVPDTNFVLHDVEEEQKEQNLFYHSEKLA 611
VF GD SH I+E L +S+ + EE YV + + + + + + HS +LA
Sbjct: 682 VFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLA 741
Query: 612 VAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCK 671
FG+IST G + V N R C CH ++ S++ +R+I++ DS FH F +G CSC
Sbjct: 742 TCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCG 801
Query: 672 DYW 674
+YW
Sbjct: 802 NYW 804
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 210/417 (50%), Gaps = 40/417 (9%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y +I + +LE+G+++HA+ F+ +++ N L+ LY K G DA+++F+EM
Sbjct: 133 YPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
+RD+ SWN+MI+GY LG D FS +L +F+
Sbjct: 193 ERDIVSWNSMISGYLALG---------------DGFS----------------SLMLFKE 221
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL-DEVVWSALLDLYGKC 249
M K ++F+ S L A + + ++GKEIH + VR+ ++ D +V +++LD+Y K
Sbjct: 222 MLKC-GFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM-GSGVRPNEYTFTGV 308
G + A IF+ M+ +++V+W MI +GR + F F+ + +G++P+ T +
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
L A A G+ +HGY MR G+ P +AL+D+Y +CG K A +F+++ ++
Sbjct: 341 LPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
+SW S+I + QNG+ AL F+ L S PD T +L A + + +G E H+
Sbjct: 397 ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE-IHA 455
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
K ++ + A G +A +++ +K D W S++ +HG
Sbjct: 456 YIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHG 511
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 175/340 (51%), Gaps = 9/340 (2%)
Query: 143 GYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKF 202
G+A +E A +LFDEM + D F WN I G+ S G EA++ + M ++ F
Sbjct: 73 GFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV-FAGVKADTF 131
Query: 203 TLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM 262
T + + A I L GK+IH +++ G D V ++L+ LY K G +A +F++M
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 263 VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
++D+VSW +MI G LF++++ G +P+ ++ L AC+ + +GK
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 323 EVHGYMMRVGYDPGS-FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQN 381
E+H + +R + G ++++D+YSK G A R+FN + + ++V+W +IG +A+N
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 382 GQ-PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTAD 440
G+ D L F ++ ++G +PD IT + +L A + +G H + G +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEG-RTIHGYAMRRGFLPHMV 366
Query: 441 HYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+ID+ G+ AE I D M+ K + W S++
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAA 405
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 33/198 (16%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P ++++ A +L +GR +HA S + I N L+ +YA CG L DA++
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F+ + +D+ SWN++I YA G+ + LF EM I+ V
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEM-----------IASRV--------- 528
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA-GLDLDEVVWSALLD 244
N NK T +S LAA + + G E + R G+D + +LD
Sbjct: 529 ------------NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLD 576
Query: 245 LYGKCGSLDEARGIFDQM 262
L G+ G+ A+ ++M
Sbjct: 577 LIGRTGNFSAAKRFLEEM 594
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 289/530 (54%), Gaps = 4/530 (0%)
Query: 148 GWLEQARKLFDEMPRRDHFS-WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
G L A+ LFD S WN I G+ + P ++ + M S + FT +
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
L + I + EIHG ++R+G D +V ++L+ Y GS++ A +FD+M +D
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 267 VVSWTTMIHRCFED-GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
+VSW MI CF G + S+++ + GV + YT +L +CA +A ++G +H
Sbjct: 173 LVSWNVMI-CCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH 231
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPD 385
+ + F +AL+D+Y+KCG+ + A VFN + + D+++W S+I G+ +G
Sbjct: 232 RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV 291
Query: 386 RALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACV 445
A+ FF ++ SG +P+ ITF+G+L C+H GLV +G+E+F + + L HY C+
Sbjct: 292 EAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCM 351
Query: 446 IDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENP 505
+DL R+G+ + +I S D LW +LLG C+IH N+EL + A L ++E N
Sbjct: 352 VDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNA 411
Query: 506 ATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIR 565
Y+ + +IY+ A A +RK + + PG SWIEI QVH F+V D HP+
Sbjct: 412 GDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESA 471
Query: 566 DIHEFLGELSKKMKEEGYVP-DTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTP 624
I+ LGE+ + GY P D+N + + HSEKLA+A+G++ T GT
Sbjct: 472 VIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTT 531
Query: 625 IKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
+++ KNLR C DCH+ KY SK R+II+RD RFH F DG CSC DYW
Sbjct: 532 LRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 36/321 (11%)
Query: 59 LLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGS 118
LL V RP ++ + +C R +++ + +H S F+ ++ L+ Y+ GS
Sbjct: 98 LLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGS 157
Query: 119 LADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSH 178
+ A ++FDEM RDL SWN MI ++ +G QA ++ M N + G
Sbjct: 158 VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG-------NEGVCG---- 206
Query: 179 GRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVV 238
+ +TL + L++ A + L +G +H + V
Sbjct: 207 ---------------------DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 245
Query: 239 WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV 298
+AL+D+Y KCGSL+ A G+F+ M +DV++W +MI G E S FR ++ SGV
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 305
Query: 299 RPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY--DPGSFAGSALVDLYSKCGNTKIA 356
RPN TF G+L C+ G E H +M + P +VDLY + G + +
Sbjct: 306 RPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 357 -SRVFNQIPRPDLVSWTSLIG 376
++ D V W +L+G
Sbjct: 365 LEMIYASSCHEDPVLWRTLLG 385
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 346 bits (887), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 252/428 (58%), Gaps = 4/428 (0%)
Query: 248 KCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG-SGVRPNEYTFT 306
K G A+ + D++V++W MI + + EE ++++ + ++PN+++F
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
L ACA H K VH M+ G + + SALVD+Y+KCG+ + VF + R
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
D+ W ++I GFA +G A+ F + PD ITF+G+L+ C+H GL+++G EYF
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
+ + + +HY ++DLL R+GR EA +I++M I+PD +W SLL R + N
Sbjct: 290 GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKN 349
Query: 487 IELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
EL + A L Y+ L+NIY++ +W KVR+ M GI K GKSW+E
Sbjct: 350 PELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Query: 547 IKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYH 606
+H F GDTSH + + I++ L L +K K +G+V DT+ VL DV EE+KE+NL YH
Sbjct: 407 FGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYH 466
Query: 607 SEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDG 666
SEKLA+A+ I+ + PGT I++ KN+R C DCH +K SK++ R II+RD RFH FEDG
Sbjct: 467 SEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDG 526
Query: 667 SCSCKDYW 674
CSC+DYW
Sbjct: 527 LCSCRDYW 534
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 8/290 (2%)
Query: 101 PGIFISNRLLDLYAKCGSLADAQRL---FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
P + +S + Y +C A+RL F + +C+ N +I K+G A+K+
Sbjct: 65 PSLLVST--VAAYRRCNRSYLARRLLLWFLSLSP-GVCNINLIIESLMKIGESGLAKKVL 121
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
++ +WN I GYV + + EAL+ + M NKF+ +S LAA A + L
Sbjct: 122 RNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDL 181
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
K +H ++ +G++L+ ++ SAL+D+Y KCG + +R +F + DV W MI
Sbjct: 182 HHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGF 241
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYM-MRVGYDPG 336
G E +F ++ V P+ TF G+L C+ GKE G M R P
Sbjct: 242 ATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPK 301
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPD 385
A+VDL + G K A + +P PD+V W SL+ P+
Sbjct: 302 LEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPE 351
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 42/240 (17%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKS 96
N +EEA+ AL K + D+ +P+ +++ +AAC R L + VH+L
Sbjct: 142 NVQYEEALKAL---KNMLSFTDI-----KPNKFSFASSLAACARLGDLHHAKWVHSLMID 193
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
S +S+ L+D+YAKCG + ++ +F + D+ WN MI G+A
Sbjct: 194 SGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFA----------- 242
Query: 157 FDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
+HG EA+ +F M+ E + + T L +
Sbjct: 243 --------------------THGLATEAIRVFSEMEA-EHVSPDSITFLGLLTTCSHCGL 281
Query: 217 LRLGKEIHGYLVRA-GLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMI 274
L GKE G + R + + A++DL G+ G + EA + + M ++ DVV W +++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 331 VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHF 390
+ PG + +++ K G + +A +V ++++W +IGG+ +N Q + AL
Sbjct: 92 LSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKA 151
Query: 391 FELLLK-SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 449
+ +L + KP++ +F L+AC G + ++ HS+ G+ A + ++D+
Sbjct: 152 LKNMLSFTDIKPNKFSFASSLAACARLGDLHHA-KWVHSLMIDSGIELNAILSSALVDVY 210
Query: 450 ARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPEN 504
A+ G + + ++ + D +W +++ G HG LA A E+E E+
Sbjct: 211 AKCGDIGTSREVFYSVK-RNDVSIWNAMITGFATHG---LATEAIRVFSEMEAEH 261
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 345 bits (886), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 310/566 (54%), Gaps = 44/566 (7%)
Query: 44 INALCQQKRLKEAVDLLHHVDRP------SPRLYSTLIAACVRHRALEQGRRVHALTKSS 97
++ + R++EA+ + + R S +++ ++++ + GR++H +T +
Sbjct: 191 VSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN 250
Query: 98 NFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
+ + +SN L+ +Y+KC SL +A K+F
Sbjct: 251 GLLGFVALSNALVTMYSKCESL-------------------------------NEACKMF 279
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
D R+ +W+A ++GY +G EA+++F M +++T+ L A + I L
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS-AGIKPSEYTIVGVLNACSDICYL 338
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
GK++H +L++ G + +AL+D+Y K G L +AR FD + ++DV WT++I
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
++ EE L+R + +G+ PN+ T VLKAC+ A LGK+VHG+ ++ G+
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
GSAL +YSKCG+ + + VF + P D+VSW ++I G + NGQ D AL FE +L
Sbjct: 459 PIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAE 518
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G +PD +TFV ++SAC+H G V++G YF+ + ++ GL DHYAC++DLL+R+G+ E
Sbjct: 519 GMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKE 578
Query: 458 AENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYAN 517
A+ I++ +I LW LL C+ HG EL A L + +TY+ L+ IY
Sbjct: 579 AKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTA 638
Query: 518 AGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKK 577
G+ + +V K M G+ K+ G SWIE+K Q HVF+VGDT HP I + + + +S++
Sbjct: 639 LGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQ 698
Query: 578 MKEEGYVP--DTNFVLHDVEEEQKEQ 601
M EEG+V D++F VEEE+ Q
Sbjct: 699 MIEEGFVTVLDSSF----VEEEEGTQ 720
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 218/423 (51%), Gaps = 38/423 (8%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMM--QKHE 195
+++ Y K G +E K+F MP R+ ++W+ +SGY + GR EA+++F + +K E
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 196 SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEA 255
S+S+ + ++ L++ AA + LG++IH ++ GL + +AL+ +Y KC SL+EA
Sbjct: 217 GSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEA 275
Query: 256 RGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH 315
+FD D++ ++W+ M+ ++G E LF + +G++P+EYT GVL AC+D
Sbjct: 276 CKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDI 335
Query: 316 AAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
GK++H +++++G++ FA +ALVD+Y+K G A + F+ + D+ WTSLI
Sbjct: 336 CYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLI 395
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE-YFHSIKEKHG 434
G+ QN + AL + + +G P+ T VL AC+ ++ G + + H+IK G
Sbjct: 396 SGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFG 455
Query: 435 L----------MHT-------------------ADHYACVIDLLARSGRFNEAENIIDNM 465
L M++ + +I L+ +G+ +EA + + M
Sbjct: 456 LEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Query: 466 ---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPAT--YITLANIYANAGQ 520
++PD + +++ C G +E N + + +P Y + ++ + AGQ
Sbjct: 516 LAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 575
Query: 521 WAE 523
E
Sbjct: 576 LKE 578
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 201/417 (48%), Gaps = 42/417 (10%)
Query: 72 STLIAACVRH---RALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDE 128
STL+ H R L GR VH + I +N L++ YAKCG LA A +F+
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNA 74
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
+ +D+ SWN++I GY++ G + + + +++F
Sbjct: 75 IICKDVVSWNSLITGYSQNGGISSSYTV----------------------------MQLF 106
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
R M+ + N +TL+ A +++ +G++ H +V+ D V ++L+ +Y K
Sbjct: 107 REMRAQDIL-PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCK 165
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM-----GSGVRPNEY 303
G +++ +F M +++ +W+TM+ GR EE +F + GS ++Y
Sbjct: 166 AGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGS---DSDY 222
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
FT VL + A LG+++H ++ G +ALV +YSKC + A ++F+
Sbjct: 223 VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS 282
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
+ ++W++++ G++QNG+ A+ F + +G KP + T VGVL+AC+ +++G
Sbjct: 283 GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG- 341
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+ HS K G ++D+ A++G +A D + + D LW SL+ G
Sbjct: 342 KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISG 397
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 139/275 (50%), Gaps = 9/275 (3%)
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
L G+ +HG ++R G + L++ Y KCG L +A IF+ ++ KDVVSW ++I
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 277 CFEDGRREEGFS---LFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
++G ++ LFR++ + PN YT G+ KA + + +G++ H ++++
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL 393
+ ++LV +Y K G + +VF +P + +W++++ G+A G+ + A+ F L
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 394 LLK---SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLA 450
L+ G+ D + F VLS+ V G + H I K+GL+ ++ + +
Sbjct: 210 FLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQ-IHCITIKNGLLGFVALSNALVTMYS 267
Query: 451 RSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
+ NEA + D+ S + W++++ G +G
Sbjct: 268 KCESLNEACKMFDS-SGDRNSITWSAMVTGYSQNG 301
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 109/270 (40%), Gaps = 49/270 (18%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKS 96
N++ EEA L +R+K A + P+ ++++ AC LE G++VH T
Sbjct: 401 NSDNEEA---LILYRRMKTAGII------PNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
F + I + L +Y+KCGSL D +F ++D+ SWN MI+G + G ++A +L
Sbjct: 452 HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 157 FDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
F+EM D ++ IS G F MM
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSD------------------- 552
Query: 213 AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWT 271
+ GLD ++ ++DL + G L EA+ + +D + W
Sbjct: 553 ----------------QIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWR 596
Query: 272 TMIHRCFEDGRREEGFSLFRDLMGSGVRPN 301
++ C G+ E G LM G R +
Sbjct: 597 ILLSACKNHGKCELGVYAGEKLMALGSRES 626
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 345 bits (885), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 274/508 (53%), Gaps = 44/508 (8%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLA--DAQRLFDE 128
Y L+ AC L + +H + I++ N L+D Y++CG L DA +LF++
Sbjct: 120 YPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK 179
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
M +RD SWN+M+ G K G L AR+LFDEMP+RD SWN + GY R RE + F
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGY---ARCREMSKAF 236
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
+ +K N+ V WS ++ Y K
Sbjct: 237 ELFEKMPERNT-------------------------------------VSWSTMVMGYSK 259
Query: 249 CGSLDEARGIFDQMV--DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
G ++ AR +FD+M K+VV+WT +I E G +E L ++ SG++ +
Sbjct: 260 AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
+L AC + LG +H + R ++ +AL+D+Y+KCGN K A VFN IP+
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
DLVSW +++ G +G A+ F + + G +PD++TF+ VL +C HAGL+D+G++YF
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
+S+++ + L+ +HY C++DLL R GR EA ++ M ++P+ +W +LLG CR+H
Sbjct: 440 YSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNE 499
Query: 487 IELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
+++AK + L +++P +P Y L+NIYA A W A +R M+ G+ K G S +E
Sbjct: 500 VDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
Query: 547 IKRQVHVFLVGDTSHPKIRDIHEFLGEL 574
++ +H F V D SHPK I++ LG L
Sbjct: 560 LEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 162/400 (40%), Gaps = 54/400 (13%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
K++H ++R L D + L+ C + A +F+Q+ + +V ++I ++
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
+ + F +F ++ G+ + +T+ +LKAC+ + + K +H ++ ++G +
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 341 SALVDLYSKCGNTKI--ASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
+AL+D YS+CG + A ++F ++ D VSW S++GG + G+ A F+ +
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM---- 211
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKE--------------KHGLMHTAD---- 440
+ D I++ +L + K E F + E K G M A
Sbjct: 212 PQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFD 271
Query: 441 ----------HYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNI 487
+ +I A G EA+ ++D M +K D S+L C G +
Sbjct: 272 KMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLL 331
Query: 488 ELAKRAANALFEIEPENPATYIT-LANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
L R + L + A + L ++YA G + V D+ P K +
Sbjct: 332 SLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI--------PKKDLVS 383
Query: 547 IKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPD 586
+H V I EL +M+ EG PD
Sbjct: 384 WNTMLHGLGVHGHGKEAI--------ELFSRMRREGIRPD 415
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 174/462 (37%), Positives = 272/462 (58%), Gaps = 32/462 (6%)
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAG 143
L G++VH T S + + + + L LY+KCGS
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS------------------------- 500
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
LE++ KLF +P +D+ W + ISG+ +G REA+ +F M + ++ ++ T
Sbjct: 501 ------LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD-DGTSPDEST 553
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
L++ L ++ P L GKEIHGY +RAG+D + SAL+++Y KCGSL AR ++D++
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 264 DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE 323
+ D VS +++I + G ++GF LFRD++ SG + + + +LKA A LG +
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQ 673
Query: 324 VHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ 383
VH Y+ ++G GS+L+ +YSK G+ + F+QI PDL++WT+LI +AQ+G+
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
+ AL + L+ + G KPD++TFVGVLSAC+H GLV++ + +S+ + +G+ HY
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 444 CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE 503
C++D L RSGR EAE+ I+NM IKPD +W +LL C+IHG +EL K AA E+EP
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPS 853
Query: 504 NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
+ YI+L+NI A G+W E + RK M+ G+ K+PG S +
Sbjct: 854 DAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 238/500 (47%), Gaps = 73/500 (14%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
+++I+AC R + + +VHA S F ++ L+ +Y+K G + ++++F+++
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL-- 412
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF-RM 190
D++ R++ N I+ + +P +A+ +F RM
Sbjct: 413 --------------------------DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRM 444
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
+Q E +++F++ S L+ + CL LGK++HGY +++GL LD V S+L LY KCG
Sbjct: 445 LQ--EGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG 499
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
SL+E+ +F + KD W +MI E G E LF +++ G P+E T VL
Sbjct: 500 SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
C+ H + GKE+HGY +R G D G GSALV++YSKCG+ K+A +V++++P D VS
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC-----------THAGLV 419
+SLI G++Q+G F ++ SG D +L A HA +
Sbjct: 620 CSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYIT 679
Query: 420 DKGLEYFHSIKEKHGLMHTA-------------------DHYACVIDLLARSGRFNEA-- 458
GL S+ M++ + +I A+ G+ NEA
Sbjct: 680 KIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQ 739
Query: 459 -ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL---FEIEPENPATYITLANI 514
N++ KPDK + +L C G +E + N++ + IEPEN Y+ + +
Sbjct: 740 VYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPEN-RHYVCMVDA 798
Query: 515 YANAGQWAEEAKVRKDMEIR 534
+G+ E +M I+
Sbjct: 799 LGRSGRLREAESFINNMHIK 818
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 206/438 (47%), Gaps = 47/438 (10%)
Query: 58 DLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLY 113
DL H + +P YS+++AAC L G+ V A +F+ ++DLY
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLY 295
Query: 114 AKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAIS 173
AKCG +A+A +F + + + SW M++GY K D FS
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTK---------------SNDAFS------ 334
Query: 174 GYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD 233
ALE+F+ M +H N T++S ++A + ++H ++ ++G
Sbjct: 335 ----------ALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 383
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQMVD---KDVVSWTTMIHRCFEDGRREEGFSLF 290
LD V +AL+ +Y K G +D + +F+ + D +++V+ MI + + + LF
Sbjct: 384 LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLF 441
Query: 291 RDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKC 350
++ G+R +E++ +L +LGK+VHGY ++ G GS+L LYSKC
Sbjct: 442 TRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKC 498
Query: 351 GNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVL 410
G+ + + ++F IP D W S+I GF + G A+ F +L GT PD+ T VL
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558
Query: 411 SACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPD 470
+ C+ + +G E H + G+ D + ++++ ++ G A + D + + D
Sbjct: 559 TVCSSHPSLPRGKE-IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELD 616
Query: 471 KFLWASLLGGCRIHGNIE 488
+SL+ G HG I+
Sbjct: 617 PVSCSSLISGYSQHGLIQ 634
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 168/340 (49%), Gaps = 9/340 (2%)
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FD + L SW Y+ G + A KLFD +P+ D S N ISGY H E+L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
F M +N+ + S ++A +A+ + + + ++ G EVV SAL+D+
Sbjct: 136 RFFSKMH-FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDV 194
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
+ K ++A +F + +V W T+I + F LF ++ +P+ YT+
Sbjct: 195 FSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTY 254
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+ VL ACA GK V +++ G + F +A+VDLY+KCG+ A VF++IP
Sbjct: 255 SSVLAACASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
P +VSWT ++ G+ ++ AL F+ + SG + + T V+SAC +V + +
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ- 372
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
H+ K G + A +I + ++SG + +E + +++
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 181/370 (48%), Gaps = 28/370 (7%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMM----QK 193
+ +I ++K E A K+F + + + WN I+G + + ++F M QK
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 194 HESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLD 253
+S +T SS LAA A++ LR GK + +++ G + D V +A++DLY KCG +
Sbjct: 249 PDS-----YTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMA 302
Query: 254 EARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACA 313
EA +F ++ + VVSWT M+ + +F+++ SGV N T T V+ AC
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 314 DHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVF---NQIPRPDLVS 370
+ +VH ++ + G+ S +AL+ +YSK G+ ++ +VF + I R ++V+
Sbjct: 363 RPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN 422
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA--CTHAGLVDKGLEYFHS 428
+I F+Q+ +P +A+ F +L+ G + D+ + +LS C + G + H
Sbjct: 423 --VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG------KQVHG 474
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
K GL+ + + L ++ G E+ + + K D WAS++ G +G +
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYGYL- 532
Query: 489 LAKRAANALF 498
R A LF
Sbjct: 533 ---REAIGLF 539
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 167/359 (46%), Gaps = 46/359 (12%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRV 90
K N + I+ + L+EA+ L + P + ++ C H +L +G+ +
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 91 HALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWL 150
H T + G+ + + L+++Y+KCGSL A++++D + + D S +++I+GY++ G +
Sbjct: 574 HGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLI 633
Query: 151 EQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
+ LF +M +SG+ + F +SS L A
Sbjct: 634 QDGFLLFRDM----------VMSGF----------------------TMDSFAISSILKA 661
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSW 270
AA LG ++H Y+ + GL + V S+LL +Y K GS+D+ F Q+ D+++W
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 271 TTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACA-----DHAAEHLGKEVH 325
T +I + G+ E ++ + G +P++ TF GVL AC+ + + HL V
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK 781
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI-PRPDLVSWTSLIGGFAQNGQ 383
Y G +P + +VD + G + A N + +PD + W +L+ +G+
Sbjct: 782 DY----GIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGE 836
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 117/272 (43%), Gaps = 18/272 (6%)
Query: 217 LRLGKEIHGYLVRAGL-DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI- 274
LR K + +L+R L D + +LL Y GS+ +A +FD + DVVS MI
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 275 ----HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR 330
HR FE+ R F + G NE ++ V+ AC+ A + V + ++
Sbjct: 124 GYKQHRLFEESLR-----FFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 331 VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHF 390
+GY SAL+D++SK + A +VF ++ W ++I G +N
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 391 FELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC--VIDL 448
F + KPD T+ VL+AC + L + ++ + D + C ++DL
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASL----EKLRFGKVVQARVIKCGAEDVFVCTAIVDL 294
Query: 449 LARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
A+ G EA + + P W +L G
Sbjct: 295 YAKCGHMAEAMEVFSRIP-NPSVVSWTVMLSG 325
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/634 (30%), Positives = 323/634 (50%), Gaps = 48/634 (7%)
Query: 43 AINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
++ + R KEAV + +P+ YS +++ C R+L+ G+++H+ T
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD 158
F + N L+D+Y KC + E+ +A ++F
Sbjct: 356 FEDSTDVGNALVDMYMKCSA--------SEV----------------------EASRVFG 385
Query: 159 EMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
M + SW I G V HG ++ + M K E N TLS L A + + +R
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV-EPNVVTLSGVLRACSKLRHVR 444
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
EIH YL+R +D + VV ++L+D Y +D A + M +D +++T+++ R
Sbjct: 445 RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFN 504
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
E G+ E S+ + G G+R ++ + G + A A+ A GK +H Y ++ G+ +
Sbjct: 505 ELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAAS 564
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
++LVD+YSKCG+ + A +VF +I PD+VSW L+ G A NG AL FE +
Sbjct: 565 VLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKE 624
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
T+PD +TF+ +LSAC++ L D GLEYF +K+ + + +HY ++ +L R+GR EA
Sbjct: 625 TEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEA 684
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANA 518
+++ M +KP+ ++ +LL CR GN+ L + AN + P +PA YI LA++Y +
Sbjct: 685 TGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDES 744
Query: 519 GQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSH-PKIRDIHEFLGELSKK 577
G+ K R M + + KK GKS +E++ +VH F+ D + K I+ + + ++
Sbjct: 745 GKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEE 804
Query: 578 MKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDC 637
+K G N +N +HS K AV +G I P P+ V KN C DC
Sbjct: 805 IKRFGSPYRGN------------ENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDC 852
Query: 638 HTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCK 671
H + +++V +KI +RD N+ H F++G CSCK
Sbjct: 853 HEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 186/386 (48%), Gaps = 21/386 (5%)
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F + + DLC N +++ Y K + ARKLFDEM R F+W IS + AL
Sbjct: 52 FGLLENLDLC--NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASAL 109
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+F M ++ N+FT SS + + A + + G +HG +++ G + + VV S+L DL
Sbjct: 110 SLFEEMMA-SGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL 168
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KCG EA +F + + D +SWT MI + E + +++ +GV PNE+TF
Sbjct: 169 YSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+L A + E GK +H ++ G ++LVD YS+ + A RV N
Sbjct: 229 VKLLGASSFLGLE-FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGE 287
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
D+ WTS++ GF +N + A+ F + G +P+ T+ +LS C+ +D G +
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG-KQ 346
Query: 426 FHSIKEKHGLMHTADHYACVIDLLAR-SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
HS K G + D ++D+ + S EA + M + P+ W +L+ G H
Sbjct: 347 IHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDH 405
Query: 485 GNI--------ELAKRAANALFEIEP 502
G + E+ KR E+EP
Sbjct: 406 GFVQDCFGLLMEMVKR------EVEP 425
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 217/462 (46%), Gaps = 44/462 (9%)
Query: 44 INALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+A + + A+ L + P+ +S+++ +C R + G RVH + F
Sbjct: 96 ISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ + L DLY+KCG +A C +LF
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEA------------C-------------------ELFSS 184
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
+ D SW IS V + REAL+ + M K N+FT L A++ + L
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVK-AGVPPNEFTFVKLLGASSFLG-LEF 242
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
GK IH ++ G+ L+ V+ ++L+D Y + +++A + + ++DV WT+++
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVR 302
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
+ R +E F ++ G++PN +T++ +L C+ + GK++H ++VG++ +
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 340 GSALVDLYSKCGNTKI-ASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
G+ALVD+Y KC +++ ASRVF + P++VSWT+LI G +G ++K
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH--GLMHTADHYACVIDLLARSGRFN 456
+P+ +T GVL AC+ V + LE + +H G M + ++D A S + +
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS---LVDAYASSRKVD 479
Query: 457 EAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALF 498
A N+I +M + D + SL+ G E+A N ++
Sbjct: 480 YAWNVIRSMK-RRDNITYTSLVTRFNELGKHEMALSVINYMY 520
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 140/263 (53%), Gaps = 3/263 (1%)
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
R+G IH +++ GL + + + LL LY K + AR +FD+M + V +WT MI
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
+ SLF ++M SG PNE+TF+ V+++CA G VHG +++ G++ S
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
GS+L DLYSKCG K A +F+ + D +SWT +I + AL F+ ++K+
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G P++ TFV +L A + GL + G + HS G+ ++D ++ + +
Sbjct: 220 GVPPNEFTFVKLLGASSFLGL-EFG-KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 458 AENIIDNMSIKPDKFLWASLLGG 480
A ++ N S + D FLW S++ G
Sbjct: 278 AVRVL-NSSGEQDVFLWTSVVSG 299
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 299/540 (55%), Gaps = 34/540 (6%)
Query: 58 DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCG 117
+++ P+ S+++ +C + L G VH + +++ N ++++YA C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 118 SLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVS 177
+A L +F ++ ++ +W I+G+
Sbjct: 161 VTMEAACL------------------------------IFRDIKVKNDVTWTTLITGFTH 190
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
G L+M++ M E++ + ++ + A+A+I + GK+IH +++ G +
Sbjct: 191 LGDGIGGLKMYKQMLL-ENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLP 249
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
V +++LDLY +CG L EA+ F +M DKD+++W T+I E E +F+ G
Sbjct: 250 VMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQG 308
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIAS 357
PN YTFT ++ ACA+ AA + G+++HG + R G++ +AL+D+Y+KCGN +
Sbjct: 309 FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQ 368
Query: 358 RVFNQI-PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHA 416
RVF +I R +LVSWTS++ G+ +G A+ F+ ++ SG +PD+I F+ VLSAC HA
Sbjct: 369 RVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHA 428
Query: 417 GLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWAS 476
GLV+KGL+YF+ ++ ++G+ D Y CV+DLL R+G+ EA +++ M KPD+ W +
Sbjct: 429 GLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGA 488
Query: 477 LLGGCRIHGNIELAKR-AANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
+LG C+ H + L R AA + E++P+ TY+ L+ IYA G+W + A+VRK M + G
Sbjct: 489 ILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMG 548
Query: 536 IVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVE 595
K+ G SWI ++ QV F V D P ++ LG L ++ +E GYVP+ + +++D E
Sbjct: 549 NKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 173/347 (49%), Gaps = 4/347 (1%)
Query: 140 MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS 199
+I Y + G +E+AR LFDEMP RD +W A I+GY S A E F M K +S
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS-P 109
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG-SLDEARGI 258
N+FTLSS L + + L G +HG +V+ G++ V +A++++Y C +++ A I
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 259 FDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAE 318
F + K+ V+WTT+I G G +++ ++ Y T ++A A +
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSV 229
Query: 319 HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGF 378
GK++H +++ G+ ++++DLY +CG A F+++ DL++W +LI
Sbjct: 230 TTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL 289
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHT 438
++ + AL F+ G P+ TF +++AC + ++ G + H + G
Sbjct: 290 ERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCG-QQLHGRIFRRGFNKN 347
Query: 439 ADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
+ +ID+ A+ G +++ + + + + W S++ G HG
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 284/520 (54%), Gaps = 33/520 (6%)
Query: 63 VDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADA 122
V P+ ++ + + AC + G ++H L S L D+YA+CG
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG----- 319
Query: 123 QRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPR 182
+L AR++FD++ R D SWN I+G ++G
Sbjct: 320 --------------------------FLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 183 EALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSAL 242
EA+ +F M + + +L S L A L G +IH Y+++ G D V ++L
Sbjct: 354 EAVSVFSQM-RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSL 412
Query: 243 LDLYGKCGSLDEARGIFDQMVDK-DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPN 301
L +Y C L +F+ + D VSW T++ C + + E LF+ ++ S P+
Sbjct: 413 LTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPD 472
Query: 302 EYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
T +L+ C + ++ LG +VH Y ++ G P F + L+D+Y+KCG+ A R+F+
Sbjct: 473 HITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD 532
Query: 362 QIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
+ D+VSW++LI G+AQ+G + AL F+ + +G +P+ +TFVGVL+AC+H GLV++
Sbjct: 533 SMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEE 592
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC 481
GL+ + +++ +HG+ T +H +CV+DLLAR+GR NEAE ID M ++PD +W +LL C
Sbjct: 593 GLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Query: 482 RIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPG 541
+ GN+ LA++AA + +I+P N ++ L +++A++G W A +R M+ + K PG
Sbjct: 653 KTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPG 712
Query: 542 KSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEE 581
+SWIEI+ ++H+F D HP+ DI+ L + +M +E
Sbjct: 713 QSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDE 752
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/578 (24%), Positives = 242/578 (41%), Gaps = 85/578 (14%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSP-----RLYSTLIAACVRHRALEQGRR 89
KT + IN+LC+ +EA++ + S R Y +LI AC R+L QGR+
Sbjct: 29 KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRK 88
Query: 90 VHALTKSSNFIPGIFISNRLLDLYAKC-------------------------------GS 118
+H +SN ++N +L +Y KC G
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 119 LADAQRLFDEMGDRDLC---------------------------------------SWNT 139
A+A RL+ +M DL + N
Sbjct: 149 GAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNA 208
Query: 140 MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS 199
+IA Y + + A ++F +P +D SW++ I+G+ G EAL + M +
Sbjct: 209 LIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHP 268
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
N++ S L A +++ G +IHG +++ L + + +L D+Y +CG L+ AR +F
Sbjct: 269 NEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVF 328
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEH 319
DQ+ D SW +I +G +E S+F + SG P+ + +L A A
Sbjct: 329 DQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALS 388
Query: 320 LGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI-PRPDLVSWTSLIGGF 378
G ++H Y+++ G+ ++L+ +Y+ C + +F D VSW +++
Sbjct: 389 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHT 438
Q+ QP L F+L+L S +PD IT +L C + G + H K GL
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPE 507
Query: 439 ADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE----LAKRAA 494
+ID+ A+ G +A I D+M + D W++L+ G G E L K
Sbjct: 508 QFIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 495 NALFEIEPENPATYITLANIYANAGQWAEEAKVRKDME 532
+A IEP N T++ + ++ G E K+ M+
Sbjct: 567 SA--GIEP-NHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/569 (33%), Positives = 306/569 (53%), Gaps = 20/569 (3%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKS 96
N FEE I A ++ + + + RP Y +++ AC + GR VH +
Sbjct: 122 NELFEEVIAA--YKRMVSKGI-------RPDAFTYPSVLKACGETLDVAFGRVVHGSIEV 172
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
S++ +++ N L+ +Y + ++ A+RLFD M +RD SWN +I YA G +A +L
Sbjct: 173 SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 157 FDEM----PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
FD+M +WN G + G AL + M+ +S + + GL A +
Sbjct: 233 FDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTS-LDPVAMIIGLKACS 291
Query: 213 AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTT 272
I +RLGKEIHG + + D + V + L+ +Y KC L A +F Q + + +W +
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNS 351
Query: 273 MIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG 332
+I + + EE L R+++ +G +PN T +L CA A GKE H Y++R
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 333 -YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF 391
+ + ++LVD+Y+K G A +V + + + D V++TSLI G+ G+ AL F
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 392 ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 451
+ + +SG KPD +T V VLSAC+H+ LV +G F ++ ++G+ H++C++DL R
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR 531
Query: 452 SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITL 511
+G +A++II NM KP WA+LL C IHGN ++ K AA L E++PENP Y+ +
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLI 591
Query: 512 ANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFL 571
AN+YA AG W++ A+VR M G+ K PG +WI+ +F VGDTS P+ + + L
Sbjct: 592 ANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLL 651
Query: 572 GELSKKMKEEGYVPDTNFVLHDVEEEQKE 600
L++ MK+ + + ++ V+ +E
Sbjct: 652 DGLNQLMKD-----NAGYAINKVQSSDEE 675
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 189/445 (42%), Gaps = 70/445 (15%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
++L++ACV RA G +VHA SS + +L+ Y+ +AQ + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHG-RPREALEMFRM 190
WN +IA YAK +LF+E+ AA VS G RP
Sbjct: 107 LHPLPWNVLIASYAK-------NELFEEVI--------AAYKRMVSKGIRP--------- 142
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
+ FT S L A + G+ +HG + + V +AL+ +Y +
Sbjct: 143 ---------DAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFR 193
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV-- 308
++ AR +FD+M ++D VSW +I+ +G E F LF + SGV + T+ +
Sbjct: 194 NMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISG 253
Query: 309 ---------------------------------LKACADHAAEHLGKEVHGYMMRVGYDP 335
LKAC+ A LGKE+HG + YD
Sbjct: 254 GCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDG 313
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+ L+ +YSKC + + A VF Q L +W S+I G+AQ + + A H +L
Sbjct: 314 IDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREML 373
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+G +P+ IT +L C + G E+ I + + ++D+ A+SG+
Sbjct: 374 VAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKI 433
Query: 456 NEAENIIDNMSIKPDKFLWASLLGG 480
A+ + D MS K D+ + SL+ G
Sbjct: 434 VAAKQVSDLMS-KRDEVTYTSLIDG 457
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 4/245 (1%)
Query: 177 SHGRPREALEMFRMMQKHESSN-SNKFTLSSG---LAAAAAIPCLRLGKEIHGYLVRAGL 232
SHG +A + F +++ SS S+ L S L+A + G ++H + + +G+
Sbjct: 15 SHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGV 74
Query: 233 DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
+ V+ L+ Y +EA+ I + + W +I ++ EE + ++
Sbjct: 75 EYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKR 134
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
++ G+RP+ +T+ VLKAC + G+ VHG + Y + +AL+ +Y + N
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 353 TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
IA R+F+++ D VSW ++I +A G A F+ + SG + IT+ +
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 413 CTHAG 417
C G
Sbjct: 255 CLQTG 259
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 328 bits (842), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 208/628 (33%), Positives = 326/628 (51%), Gaps = 60/628 (9%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ S+++ +C E G++VH L I+++N ++ +Y +C A A
Sbjct: 159 PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAY-- 212
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
+A +F+ + ++ +WN+ I+ + ++A+
Sbjct: 213 --------------------------EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAI 246
Query: 186 EMFRMMQKHESSNSNKFTL----SSGLAAAAAIP------CLRLGKEIHGYLVRAGLDLD 235
+F M + ++ TL SS ++ +P CL+L H V++GL
Sbjct: 247 GVFMRMHS-DGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQL----HSLTVKSGLVTQ 301
Query: 236 EVVWSALLDLYGK-CGSLDEARGIFDQMVD-KDVVSWTTMIHRCFEDGRREEGFSLFRDL 293
V +AL+ +Y + + +F +M +D+V+W +I F E LF L
Sbjct: 302 TEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGII-TAFAVYDPERAIHLFGQL 360
Query: 294 MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT 353
+ P+ YTF+ VLKACA +H +++ G+ + ++L+ Y+KCG+
Sbjct: 361 RQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSL 420
Query: 354 KIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC 413
+ RVF+ + D+VSW S++ ++ +GQ D L F+ K PD TF+ +LSAC
Sbjct: 421 DLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQ---KMDINPDSATFIALLSAC 477
Query: 414 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL 473
+HAG V++GL F S+ EK + +HYACVID+L+R+ RF EAE +I M + PD +
Sbjct: 478 SHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVV 537
Query: 474 WASLLGGCRIHGNIELAKRAANALFE-IEPENPATYITLANIYANAGQWAEEAKVRKDME 532
W +LLG CR HGN L K AA+ L E +EP N +YI ++NIY G + E K+ME
Sbjct: 538 WIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEME 597
Query: 533 IRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFV-L 591
+ K+P SW EI +VH F G P ++ L L +KE GYVP+
Sbjct: 598 TWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQ 657
Query: 592 HDVEEEQKEQNLFYHSEKLAVAFGII----STPPGTP-IKVFKNLRTCVDCHTAMKYTSK 646
+EEQ+E NL +HSEKLA+AF ++ S+ G I++ KN R C+DCH MK SK
Sbjct: 658 DIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASK 717
Query: 647 IVQRKIILRDSNRFHCFEDGSCSCKDYW 674
++ ++I++RDSNRFH F+D SCSC DYW
Sbjct: 718 LLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 236/510 (46%), Gaps = 63/510 (12%)
Query: 40 FEEAINALCQQKRLKEAVDLLHH--VDRPSPRLYSTLIAACVRHRALEQGRRVH--ALTK 95
F E + L + ++ AV L + V+ S + Y+ L AC R L G +H L+
Sbjct: 29 FVEGLRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSH 88
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARK 155
+ + ++N L+++YAKCG++ A+++FD M +R++ SW +I GY + G ++
Sbjct: 89 PYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFC 148
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
LF M +SH P N+FTLSS L + P
Sbjct: 149 LFSSM---------------LSHCFP------------------NEFTLSSVLTSCRYEP 175
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC---GSLDEARGIFDQMVDKDVVSWTT 272
GK++HG ++ GL V +A++ +YG+C + EA +F+ + K++V+W +
Sbjct: 176 ----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNS 231
Query: 273 MI--HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV---LKACADHAAEHLGK---EV 324
MI +C G++ G +F + GV + T + L +D + K ++
Sbjct: 232 MIAAFQCCNLGKKAIG--VFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQL 289
Query: 325 HGYMMRVGYDPGSFAGSALVDLYSK-CGNTKIASRVFNQIPR-PDLVSWTSLIGGFAQNG 382
H ++ G + +AL+ +YS+ + ++F ++ D+V+W +I FA
Sbjct: 290 HSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY- 348
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD-KGLEYFHSIKEKHGLMHTADH 441
P+RA+H F L + PD TF VL AC AGLV + H+ K G +
Sbjct: 349 DPERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVIKGGFLADTVL 406
Query: 442 YACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIE 501
+I A+ G + + D+M + D W S+L +HG ++ + +I
Sbjct: 407 NNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQVDSILPVFQKM-DIN 464
Query: 502 PENPATYITLANIYANAGQWAEEAKVRKDM 531
P++ AT+I L + ++AG+ E ++ + M
Sbjct: 465 PDS-ATFIALLSACSHAGRVEEGLRIFRSM 493
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/474 (36%), Positives = 275/474 (58%), Gaps = 20/474 (4%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D D N++I+GY+ G + A +LFD +D +W A I G+V +G EA+ F
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHG-YLVRAGLDLDEVVWSALLDLYGKC 249
M+K +N+ T+ S L AA + +R G+ +HG YL + D + S+L+D+YGKC
Sbjct: 195 MKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMI-----HRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
D+A+ +FD+M ++VV+WT +I RCF+ +G +F +++ S V PNE T
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD-----KGMLVFEEMLKSDVAPNEKT 308
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
+ VL ACA A H G+ VH YM++ + + AG+ L+DLY KCG + A VF ++
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
++ +WT++I GFA +G A F +L S P+++TF+ VLSAC H GLV++G
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRR 428
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
F S+K + + ADHYAC++DL R G EA+ +I+ M ++P +W +L G C +H
Sbjct: 429 LFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH 488
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
+ EL K AA+ + +++P + Y LAN+Y+ + W E A+VRK M+ + +VK PG SW
Sbjct: 489 KDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSW 548
Query: 545 IEIKRQVHVFLVGDTSHP-KIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEE 597
IE+K ++ F+ D P + D+++ L + +M+ +PD L DV E
Sbjct: 549 IEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR----LPDE---LEDVTAE 595
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 14/320 (4%)
Query: 222 EIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDG 281
+ H ++V+ GLD D V ++L+ Y G D A +FD DKDVV+WT MI +G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 282 RREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG-YDPGSFAG 340
E F ++ +GV NE T VLKA G+ VHG + G F G
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 341 SALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTK 400
S+LVD+Y KC A +VF+++P ++V+WT+LI G+ Q+ D+ + FE +LKS
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 401 PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAEN 460
P++ T VLSAC H G + +G H K+ + +IDL + G EA
Sbjct: 304 PNEKTLSSVLSACAHVGALHRG-RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 461 IIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALF------EIEPENPATYITLANI 514
+ + + K + + W +++ G HG R A LF + P N T++ + +
Sbjct: 363 VFERLHEK-NVYTWTAMINGFAAHGY----ARDAFDLFYTMLSSHVSP-NEVTFMAVLSA 416
Query: 515 YANAGQWAEEAKVRKDMEIR 534
A+ G E ++ M+ R
Sbjct: 417 CAHGGLVEEGRRLFLSMKGR 436
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 146/293 (49%), Gaps = 35/293 (11%)
Query: 87 GRRVHALTKSSNFIP-GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYA 145
GR VH L + + +FI + L+D+Y KC DAQ++FDEM R++ +W +IAGY
Sbjct: 223 GRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYV 282
Query: 146 KLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
+ ++ +F+EM + D N+ TLS
Sbjct: 283 QSRCFDKGMLVFEEMLKSD--------------------------------VAPNEKTLS 310
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK 265
S L+A A + L G+ +H Y+++ ++++ + L+DLY KCG L+EA +F+++ +K
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
+V +WT MI+ G + F LF ++ S V PNE TF VL ACA G+ +
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 326 GYMM-RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIG 376
M R +P + + +VDL+ + G + A + ++P P V W +L G
Sbjct: 431 LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 255 ARGIFDQMVDKDVVSWTTMIHRCFEDG---RREEGFSLFRDLMGSGVRPNEYTFTGVLKA 311
AR + Q+ + W ++I F G R F +R + +GV P+ +TF +LKA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGH-FSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 312 CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSW 371
+ + H ++++ G D F ++L+ YS G ASR+F+ D+V+W
Sbjct: 114 VFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTW 172
Query: 372 TSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKE 431
T++I GF +NG A+ +F + K+G +++T V VL A AG V+ + + S+
Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA---AGKVED-VRFGRSV-- 226
Query: 432 KHGLMHTADHYAC-------VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
HGL C ++D+ + +++A+ + D M + + W +L+ G
Sbjct: 227 -HGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIAG 280
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 41/225 (18%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + S++++AC AL +GRRVH ++ L+DLY KCG L +A +
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F+ + ++++ +W MI G+A +HG R+A
Sbjct: 364 FERLHEKNVYTWTAMINGFA-------------------------------AHGYARDAF 392
Query: 186 EMF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV-RAGLDLDEVVWSALL 243
++F M+ H S N+ T + L+A A + G+ + + R ++ ++ ++
Sbjct: 393 DLFYTMLSSHVS--PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 244 DLYGKCGSLDEARGIFDQM-VDKDVVSW-----TTMIHRCFEDGR 282
DL+G+ G L+EA+ + ++M ++ V W + ++H+ +E G+
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGK 495
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 285/532 (53%), Gaps = 36/532 (6%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPS----PRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I L R KE + + R ++ + AC R ++ G+ +H F
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ + ++N L +Y +CG + D LC LF+
Sbjct: 241 VTTLCVANSLATMYTECGEMQDG-----------LC--------------------LFEN 269
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M RD SW + I Y G+ +A+E F M+ + N+ T +S +A A++ L
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP-PNEQTFASMFSACASLSRLVW 328
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G+++H ++ GL+ V ++++ +Y CG+L A +F M +D++SW+T+I +
Sbjct: 329 GEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQ 388
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
G EEGF F + SG +P ++ +L + A G++VH + G + S
Sbjct: 389 AGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTV 448
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
S+L+++YSKCG+ K AS +F + R D+VS T++I G+A++G+ A+ FE LK G
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGF 508
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
+PD +TF+ VL+ACTH+G +D G YF+ ++E + + +HY C++DLL R+GR ++AE
Sbjct: 509 RPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAE 568
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAG 519
+I+ MS K D +W +LL C+ G+IE +RAA + E++P +TLANIY++ G
Sbjct: 569 KMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTG 628
Query: 520 QWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFL 571
E A VRK+M+ +G++K+PG S I+IK V F+ GD HP+ DI+ L
Sbjct: 629 NLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/532 (23%), Positives = 238/532 (44%), Gaps = 76/532 (14%)
Query: 36 TNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
T NN +EA+ L A+ ++ H P + S ++ AC + + G +HA
Sbjct: 83 TANNSDEAL-------ILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAV 135
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARK 155
++ + +++ + LLD+Y + G + +++ +
Sbjct: 136 KTSLLSSVYVGSSLLDMYKRVGKI-------------------------------DKSCR 164
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
+F EMP R+ +W A I+G V GR +E L F M + E S+ +T + L A A +
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAGLR 223
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
++ GK IH +++ G V ++L +Y +CG + + +F+ M ++DVVSWT++I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
G+ + F + S V PNE TF + ACA + G+++H ++ +G +
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
++++ +YS CGN AS +F + D++SW+++IGG+ Q G + +F +
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+SGTKP +LS + +++ G + H++ GL + + +I++ ++ G
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 456 NEAENI----------------------------ID------NMSIKPDKFLWASLLGGC 481
EA I ID + +PD + S+L C
Sbjct: 463 KEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 482 RIHGNIELAKRAANALFEIEPENPAT--YITLANIYANAGQWAEEAKVRKDM 531
G ++L N + E PA Y + ++ AG+ ++ K+ +M
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 165/344 (47%), Gaps = 3/344 (0%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N+ + G L AR++FD+MP D SW + I YV+ EAL +F M+ + +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 198 NS-NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
S + LS L A + G+ +H Y V+ L V S+LLD+Y + G +D++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+F +M ++ V+WT +I GR +EG + F ++ S + YTF LKACA
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
GK +H +++ G+ ++L +Y++CG + +F + D+VSWTSLI
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
+ + GQ +A+ F + S P++ TF + SAC + G E H GL
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG-EQLHCNVLSLGLN 342
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+ ++ + + G A + M + D W++++GG
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGG 385
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/577 (30%), Positives = 302/577 (52%), Gaps = 48/577 (8%)
Query: 41 EEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFI 100
+EAI AL Q R +A +P ++ +++ C ++ GR++ +L S F
Sbjct: 52 QEAI-ALFTQLRFSDA--------KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFC 102
Query: 101 PGIFISNRLLDLYAKCGSLADAQRLFDEM--GDRDLCSWNTMIAGYAKLGWLEQARKLFD 158
+ ++N L+D+Y KC A ++F +M R+ +W +++ Y E A +F
Sbjct: 103 ASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFV 162
Query: 159 EMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC-L 217
EMP+R F+WN ISG+ G+ L +F+ M + E + +T SS + A +A +
Sbjct: 163 EMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEF-KPDCYTFSSLMNACSADSSNV 221
Query: 218 RLGKEIHGYLVRAGLD-------------------------------LDEVVWSALLDLY 246
G+ +H +++ G L +V W++++D
Sbjct: 222 VYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDAC 281
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
K G ++A +F +K++V+WTTMI +G E+ F ++M SGV + + +
Sbjct: 282 MKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYG 341
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
VL AC+ A GK +HG ++ G+ ++ G+ALV+LY+KCG+ K A R F I
Sbjct: 342 AVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK 401
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
DLVSW +++ F +G D+AL ++ ++ SG KPD +TF+G+L+ C+H+GLV++G F
Sbjct: 402 DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIF 461
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI----KPDKFLWASLLGGCR 482
S+ + + + DH C+ID+ R G EA+++ S + W +LLG C
Sbjct: 462 ESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACS 521
Query: 483 IHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGK 542
H + EL + + L EP +++ L+N+Y + G+W E VR++M RG+ K PG
Sbjct: 522 THWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGC 581
Query: 543 SWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMK 579
SWIE+ QV F+VGD+SHP++ ++ E L L +M+
Sbjct: 582 SWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 208/458 (45%), Gaps = 71/458 (15%)
Query: 141 IAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSN 200
IA AK G + AR++FD MP D +WN ++ Y G +EA+ +F + + + +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL-RFSDAKPD 69
Query: 201 KFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG---------- 250
++ ++ L+ A++ ++ G++I ++R+G V ++L+D+YGKC
Sbjct: 70 DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 251 -----------------------SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGF 287
+ A +F +M + +W MI G+ E
Sbjct: 130 DMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCL 189
Query: 288 SLFRDLMGSGVRPNEYTFTGVLKAC-ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
SLF++++ S +P+ YTF+ ++ AC AD + G+ VH M++ G+ A ++++
Sbjct: 190 SLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSF 249
Query: 347 YSKCGN-------------------------------TKIASRVFNQIPRPDLVSWTSLI 375
Y+K G+ T+ A VF+ P ++V+WT++I
Sbjct: 250 YTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMI 309
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
G+ +NG ++AL FF ++KSG D + VL AC+ L+ G + H G
Sbjct: 310 TGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-KMIHGCLIHCGF 368
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAAN 495
A +++L A+ G EA+ +++ K D W ++L +HG + A + +
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHGLADQALKLYD 427
Query: 496 ALFE--IEPENPATYITLANIYANAGQWAEEAKVRKDM 531
+ I+P+N T+I L +++G E + + M
Sbjct: 428 NMIASGIKPDN-VTFIGLLTTCSHSGLVEEGCMIFESM 464
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/614 (29%), Positives = 300/614 (48%), Gaps = 81/614 (13%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALT 94
+F I+ Q ++A++L + +L Y+ + C L+ G +H L
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV 174
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQAR 154
+ +F+ N L+D+Y+KCG L A LFD +RD SWN++I+GY ++G E+
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPL 234
Query: 155 KLFDEMPRR------------------------------------------DHFSWNAAI 172
L +M R D A +
Sbjct: 235 NLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALL 294
Query: 173 SGYVSHGRPREALEMFRMM-------------------QKHESSNSNKF----------- 202
Y +G +EA+++F +M + + ++S F
Sbjct: 295 DMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGL 354
Query: 203 -----TLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
T S L A +A L G++IH + + DE + SAL++LY GS ++
Sbjct: 355 EPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQ 414
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
F +D+ SWT+MI ++ + E F LFR L S +RP EYT + ++ ACAD AA
Sbjct: 415 CFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAA 474
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
G+++ GY ++ G D + ++ + +Y+K GN +A++VF ++ PD+ +++++I
Sbjct: 475 LSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISS 534
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
AQ+G + AL+ FE + G KP+Q F+GVL AC H GLV +GL+YF +K + +
Sbjct: 535 LAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINP 594
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL 497
H+ C++DLL R+GR ++AEN+I + + W +LL CR++ + + KR A L
Sbjct: 595 NEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERL 654
Query: 498 FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVG 557
E+EPE +Y+ L NIY ++G + +VR+ M RG+ K+P SWI I Q H F V
Sbjct: 655 MELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVA 714
Query: 558 DTSHPKIRDIHEFL 571
D SHP + I+ L
Sbjct: 715 DLSHPSSQMIYTML 728
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 193/409 (47%), Gaps = 22/409 (5%)
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
Y K L AR+LFD MP R+ S+N+ ISGY G +A+E+F + + + +KFT
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF-LEAREANLKLDKFT 150
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
+ L L LG+ +HG +V GL + + L+D+Y KCG LD+A +FD+
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 264 DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHL--- 320
++D VSW ++I G EE +L + G+ Y VLKAC + E
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 321 GKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQ 380
G +H Y ++G + +AL+D+Y+K G+ K A ++F+ +P ++V++ ++I GF Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 381 NGQ-----PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
+ A F + + G +P TF VL AC+ A ++ G + H++ K+
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ-IHALICKNNF 389
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG-NIELAKRAA 494
+ +I+L A G + + S K D W S++ C + +E A
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTS-KQDIASWTSMI-DCHVQNEQLESAFDLF 447
Query: 495 NALFE--IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPG 541
LF I PE + ++ A+ A + +I+G K G
Sbjct: 448 RQLFSSHIRPEEYTVSLMMS-------ACADFAALSSGEQIQGYAIKSG 489
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 133/265 (50%), Gaps = 7/265 (2%)
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS 269
AA + LGK HG+++++ L+ + + LL++Y KC L AR +FD+M +++++S
Sbjct: 56 TAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIIS 115
Query: 270 WTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM 329
+ ++I + G E+ LF + + ++ +++T+ G L C + LG+ +HG ++
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVV 175
Query: 330 RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALH 389
G F + L+D+YSKCG A +F++ D VSW SLI G+ + G + L+
Sbjct: 176 VNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLN 235
Query: 390 FFELLLKSGTKPDQITFVGVLSACT---HAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
+ + G VL AC + G ++KG+ H K G+ ++
Sbjct: 236 LLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGMEFDIVVRTALL 294
Query: 447 DLLARSGRFNEAENIIDNMSIKPDK 471
D+ A++G EA I S+ P K
Sbjct: 295 DMYAKNGSLKEA---IKLFSLMPSK 316
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 283/490 (57%), Gaps = 27/490 (5%)
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
D+C N I Y K L +A ++FDEM RRD SWNA I+ + +G+ E L +F M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
+ ++FT S L A L G EIH +V++G+ + V +L+D+Y KCG +
Sbjct: 476 RSRI-EPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 253 DEARGI----------------FDQMVDKDV----VSWTTMIHRCFEDGRREEGFSLFRD 292
+EA I ++M +K + VSW ++I + E+ LF
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
+M G+ P+++T+ VL CA+ A+ LGK++H +++ + S LVD+YSKCG+
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 353 TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
+ +F + R D V+W ++I G+A +G+ + A+ FE ++ KP+ +TF+ +L A
Sbjct: 654 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 413 CTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKF 472
C H GL+DKGLEYF+ +K +GL HY+ ++D+L +SG+ A +I M + D
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773
Query: 473 LWASLLGGCRIH-GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDM 531
+W +LLG C IH N+E+A+ A AL ++P++ + Y L+N+YA+AG W + + +R++M
Sbjct: 774 IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 833
Query: 532 EIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVL 591
+ K+PG SW+E+K ++HVFLVGD +HP+ +I+E LG + +MK D++FV
Sbjct: 834 RGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKP---FDDSSFV- 889
Query: 592 HDVEEEQKEQ 601
VE E+++Q
Sbjct: 890 RGVEVEEEDQ 899
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/514 (27%), Positives = 236/514 (45%), Gaps = 56/514 (10%)
Query: 58 DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCG 117
D L+ V+ S +S + C + ALE G++ HA S F P F+ N LL +Y
Sbjct: 38 DFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSR 97
Query: 118 SLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVS 177
A +FD+M RD+ SWN MI GY+K + +A F+ MP RD SWN+ +SGY+
Sbjct: 98 DFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQ 157
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
+G +++E+F M + E + T + L + + LG +IHG +VR G D D V
Sbjct: 158 NGESLKSIEVFVDMGR-EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVV 216
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
SALLD+Y K E+ +F + +K+ VSW+ +I C ++ F+++
Sbjct: 217 AASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 276
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIAS 357
++ + VL++CA + LG ++H + ++ + +A +D+Y+KC N + A
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336
Query: 358 RVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAG 417
+F+ + S+ ++I G++Q +AL F L+ SG D+I+ GV AC
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 418 LVDKGLE-YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM----------- 465
+ +GL+ Y +IK L + A ID+ + EA + D M
Sbjct: 397 GLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 466 -----------------------SIKPDKFLWASLLGGC---------RIHGNIELAKRA 493
I+PD+F + S+L C IH +I + A
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMA 514
Query: 494 ANALFEIEPENPATYITLANIYANAGQWAEEAKV 527
+N+ + +L ++Y+ G E K+
Sbjct: 515 SNS---------SVGCSLIDMYSKCGMIEEAEKI 539
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 265 KDVVSWTTMIHRCFEDG---RREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
+ VVS+ +RC + RR FS F D + + F+ V K CA A LG
Sbjct: 12 RSVVSF----NRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELG 67
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFA-- 379
K+ H +M+ G+ P +F + L+ +Y+ + AS VF+++P D+VSW +I G++
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 380 -----------------------------QNGQPDRALHFFELLLKSGTKPDQITFVGVL 410
QNG+ +++ F + + G + D TF +L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 411 SACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPD 470
C+ G++ H I + G + ++D+ A+ RF E+ + + K +
Sbjct: 188 KVCSFLEDTSLGMQ-IHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-N 245
Query: 471 KFLWASLLGGCRIHGNIELA 490
W++++ GC + + LA
Sbjct: 246 SVSWSAIIAGCVQNNLLSLA 265
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P Y+T++ C + G+++HA ++I + L+D+Y+KCG L D++ +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM----PRRDHFSWNAAISGYVSHGRP 181
F++ RD +WN MI GYA G E+A +LF+ M + +H ++ + + G
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 182 REALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSA 241
+ LE F MM++ GLD +S
Sbjct: 721 DKGLEYFYMMKRD-----------------------------------YGLDPQLPHYSN 745
Query: 242 LLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMIHRC 277
++D+ GK G + A + +M + D V W T++ C
Sbjct: 746 MVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 782
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 304/561 (54%), Gaps = 43/561 (7%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVD-----RPSPRLYSTLIAACVRHRALEQGRR 89
+ N + I + Q + EA DL ++ L STL AC L QG++
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL-KACTHVHGLYQGKQ 550
Query: 90 VHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGW 149
VH L+ KCG DRDL + +++I Y+K G
Sbjct: 551 VHCLS-------------------VKCGL------------DRDLHTGSSLIDMYSKCGI 579
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLA 209
++ ARK+F +P S NA I+GY S EA+ +F+ M N ++ T ++ +
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTR-GVNPSEITFATIVE 637
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLD-EVVWSALLDLYGKCGSLDEARGIFDQMVD-KDV 267
A L LG + HG + + G + E + +LL +Y + EA +F ++ K +
Sbjct: 638 ACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
V WT M+ ++G EE ++++ GV P++ TF VL+ C+ ++ G+ +H
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL 757
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR-PDLVSWTSLIGGFAQNGQPDR 386
+ + +D + L+D+Y+KCG+ K +S+VF+++ R ++VSW SLI G+A+NG +
Sbjct: 758 IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAED 817
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
AL F+ + +S PD+ITF+GVL+AC+HAG V G + F + ++G+ DH AC++
Sbjct: 818 ALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPA 506
DLL R G EA++ I+ ++KPD LW+SLLG CRIHG+ + +A L E+EP+N +
Sbjct: 878 DLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSS 937
Query: 507 TYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRD 566
Y+ L+NIYA+ G W + +RK M RG+ K PG SWI+++++ H+F GD SH +I
Sbjct: 938 AYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGK 997
Query: 567 IHEFLGELSKKMKEEGYV-PD 586
I FL +L MK++ V PD
Sbjct: 998 IEMFLEDLYDLMKDDAVVNPD 1018
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 228/467 (48%), Gaps = 43/467 (9%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+++L++ C LE G + H++ +F+ N L+D+YAKCG+L DA+++F+ M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
DRD +WNT+I Y + +A LF M + G VS G
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMN----------LCGIVSDGA---------- 530
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
L+S L A + L GK++H V+ GLD D S+L+D+Y KCG
Sbjct: 531 ------------CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
+ +AR +F + + VVS +I + EE LF++++ GV P+E TF +++
Sbjct: 579 IIKDARKVFSSLPEWSVVSMNALIAG-YSQNNLEEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDP-GSFAGSALVDLYSKCGNTKIASRVFNQIPRP-DL 368
AC + LG + HG + + G+ G + G +L+ +Y A +F+++ P +
Sbjct: 638 ACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
V WT ++ G +QNG + AL F++ + G PDQ TFV VL C+ + +G HS
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-RAIHS 756
Query: 429 IKEKHGLMHTADHYA--CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
+ L H D +ID+ A+ G + + D M + + W SL+ G +G
Sbjct: 757 L--IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 487 IELAKRAANALFE--IEPENPATYITLANIYANAGQWAEEAKVRKDM 531
E A + +++ + I P+ T++ + ++AG+ ++ K+ + M
Sbjct: 815 AEDALKIFDSMRQSHIMPDE-ITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 208/450 (46%), Gaps = 37/450 (8%)
Query: 51 KRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
K L+ V L + P+ +S +++ C R +E GR++H + L+
Sbjct: 143 KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALV 202
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAK------------------------ 146
D+YAKC ++DA+R+F+ + D + W + +GY K
Sbjct: 203 DMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHL 262
Query: 147 -----------LGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHE 195
LG L+ AR LF EM D +WN ISG+ G A+E F M+K
Sbjct: 263 AFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-S 321
Query: 196 SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEA 255
S S + TL S L+A + L LG +H ++ GL + V S+L+ +Y KC ++ A
Sbjct: 322 SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 256 RGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH 315
+F+ + +K+ V W MI +G + LF D+ SG +++TFT +L CA
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 316 AAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
+G + H +++ F G+ALVD+Y+KCG + A ++F ++ D V+W ++I
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII 501
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
G + Q+ A F+ + G D L ACTH + +G + H + K GL
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCGL 560
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNM 465
+ +ID+ ++ G +A + ++
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 196/380 (51%), Gaps = 7/380 (1%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
+++++ Y+K +E A K+F+ + ++ WNA I GY +G + +E+F M K
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF-MDMKSSGY 424
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
N + FT +S L+ AA L +G + H +++ L + V +AL+D+Y KCG+L++AR
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
IF++M D+D V+W T+I +D E F LF+ + G+ + LKAC
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
+ GK+VH ++ G D GS+L+D+YSKCG K A +VF+ +P +VS +LI G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
++QN + A+ F+ +L G P +ITF ++ AC + G + FH K G
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSS 662
Query: 438 TADHYAC-VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
++ ++ + S EA + +S LW ++ G +G E A +
Sbjct: 663 EGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKE 722
Query: 497 LFE--IEPENPATYITLANI 514
+ + P+ AT++T+ +
Sbjct: 723 MRHDGVLPDQ-ATFVTVLRV 741
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 14/322 (4%)
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
LR+GK +H + G+D + + +A++DLY KC + A FD ++KDV +W +M+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSM 134
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
G+ + F L + + PN++TF+ VL CA G+++H M+++G +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
S+ G ALVD+Y+KC A RVF I P+ V WT L G+ + G P+ A+ FE +
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
G +PD + FV V++ G + F G M + D A + + R
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLF-------GEMSSPDVVAWNVMISGHGKRGC 307
Query: 457 EAENI-----IDNMSIKPDKFLWASLLGGCRIHGNIELAKRA-ANALFEIEPENPATYIT 510
E I + S+K + S+L I N++L A A+ N +
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 511 LANIYANAGQWAEEAKVRKDME 532
L ++Y+ + AKV + +E
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALE 389
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 174/402 (43%), Gaps = 78/402 (19%)
Query: 83 ALEQGRRVHALTKSSNFIPGI----FISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWN 138
AL G+ VH S + I GI + N ++DLYAKC ++ A++ FD + ++D+ +WN
Sbjct: 75 ALRIGKAVH----SKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWN 129
Query: 139 TMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSN 198
+M++ Y+ + G+P + L F + +++
Sbjct: 130 SMLSMYSSI-------------------------------GKPGKVLRSFVSLFENQIF- 157
Query: 199 SNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGI 258
NKFT S L+ A + G++IH +++ GL+ + AL+D+Y KC + +AR +
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 259 FDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAE 318
F+ +VD + V WT + + G EE +F + G RP+ F V
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV---------- 267
Query: 319 HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGF 378
++ Y + G K A +F ++ PD+V+W +I G
Sbjct: 268 -------------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH 302
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHT 438
+ G A+ +F + KS K + T VLSA +D GL H+ K GL
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL-VVHAEAIKLGLASN 361
Query: 439 ADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+ ++ + ++ + A + + + K D F W +++ G
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF-WNAMIRG 402
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
A +GK VH + +G D G+A+VDLY+KC A + F+ + + D+ +W S++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLS 133
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
++ G+P + L F L ++ P++ TF VLS C V+ G + H K GL
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ-IHCSMIKMGLE 192
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
+ ++D+ A+ R ++A + + + + P+ W L G G E A
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 497 LFEIEPENP--ATYITLANIYANAGQ 520
+ + E P ++T+ N Y G+
Sbjct: 252 MRD-EGHRPDHLAFVTVINTYIRLGK 276
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 290/547 (53%), Gaps = 39/547 (7%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALT 94
++ I+ Q ++A++L ++ P+ + I+AC R LE+G+ +H
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQAR 154
F ++++ L+D+Y KC L E AR
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCL-------------------------------EVAR 263
Query: 155 KLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAI 214
++F +MPR+ +WN+ I GYV+ G + +E+ M E + ++ TL+S L A +
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII-EGTRPSQTTLTSILMACSRS 322
Query: 215 PCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV-SWTTM 273
L GK IHGY++R+ ++ D V +L+DLY KCG + A +F + KDV SW M
Sbjct: 323 RNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVM 381
Query: 274 IHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
I G + ++ ++ GV+P+ TFT VL AC+ AA GK++H +
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL 441
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL 393
+ SAL+D+YSKCGN K A R+FN IP+ D+VSWT +I + +GQP AL+ F+
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDE 501
Query: 394 LLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
+ K G KPD +T + VLSAC HAGL+D+GL++F ++ K+G+ +HY+C+ID+L R+G
Sbjct: 502 MQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAG 561
Query: 454 RFNEAENIIDNMSIKPDKF-LWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLA 512
R EA II D L ++L C +H L R A L E P++ +TY+ L
Sbjct: 562 RLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLF 621
Query: 513 NIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLG 572
N+YA+ W +VR M+ G+ KKPG SWIE+ +V F D SH + +++E L
Sbjct: 622 NLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLA 681
Query: 573 ELSKKMK 579
LS M+
Sbjct: 682 LLSGHME 688
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 183/354 (51%), Gaps = 3/354 (0%)
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
D+ ++++ YAK E + ++FDEMP RD SWN IS + G +ALE+F M+
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
N +L+ ++A + + L GKEIH V+ G +LDE V SAL+D+YGKC L
Sbjct: 201 S-SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCL 259
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
+ AR +F +M K +V+W +MI G + + ++ G RP++ T T +L AC
Sbjct: 260 EVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
+ GK +HGY++R + + +L+DLY KCG +A VF++ + SW
Sbjct: 320 SRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN 379
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
+I + G +A+ ++ ++ G KPD +TF VL AC+ ++KG + SI E
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
L + ++D+ ++ G EA I +++ K D W ++ HG
Sbjct: 440 R-LETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQ 491
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 232/528 (43%), Gaps = 67/528 (12%)
Query: 106 SNRLLDLYAKCGSLADA--------QRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
S++LL L +C + + QR+ RD+ ++I Y AR +F
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 158 DEMP-RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
+ R D + WN+ +SGY + + LE+F+ + + FT + + A A+
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
LG+ IH +V++G D VV S+L+ +Y K + + +FD+M ++DV SW T+I
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
++ G E+ LF + SG PN + T + AC+ GKE+H ++ G++
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
+ SALVD+Y KC ++A VF ++PR LV+W S+I G+ G + ++
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA--CVIDLLARSGR 454
GT+P Q T +L AC+ + + G ++ H + + AD Y +IDL + G
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVV--NADIYVNCSLIDLYFKCGE 359
Query: 455 FNEAENIID----------------------------------NMSIKPDKFLWASLLGG 480
N AE + ++ +KPD + S+L
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 481 CRIHGNIELAKRAANALFEIEPENPATYIT-LANIYANAGQWAEEAKVRKDMEIRGIVKK 539
C +E K+ ++ E E ++ L ++Y+ G E ++ I KK
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI-----FNSIPKK 474
Query: 540 PGKSWIEIKRQVHVFLVGDTSHPKIRD-IHEFLGELSKKMKEEGYVPD 586
SW V + SH + R+ +++F +M++ G PD
Sbjct: 475 DVVSWT-------VMISAYGSHGQPREALYQF-----DEMQKFGLKPD 510
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 322 bits (824), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/477 (36%), Positives = 268/477 (56%), Gaps = 37/477 (7%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N+++ YA LG +E K+FDEMP+RD SWN IS YV +GR +A+ +F+ M + +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
++ T+ S L+A +A+ L +G+ I+ ++V ++ + +AL+D++ KCG LD+AR
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARA 203
Query: 258 IFDQMVDK-------------------------------DVVSWTTMIHRCFEDGRREEG 286
+FD M DK DVV WT M++ + R +E
Sbjct: 204 VFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
LFR + +G+RP+ + +L CA A GK +HGY+ G+ALVD+
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDM 323
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y+KCG + A VF +I D SWTSLI G A NG RAL + + G + D ITF
Sbjct: 324 YAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITF 383
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
V VL+AC H G V +G + FHS+ E+H + ++H +C+IDLL R+G +EAE +ID M
Sbjct: 384 VAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
Query: 467 IKPDKFL---WASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAE 523
+ D+ L + SLL R +GN+++A+R A L ++E + + + LA++YA+A +W +
Sbjct: 444 GESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWED 503
Query: 524 EAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGD--TSHPKIRDIHEFLGELSKKM 578
VR+ M+ GI K PG S IEI H F+VGD SHPK+ +I+ L + + M
Sbjct: 504 VTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLM 560
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 165/316 (52%), Gaps = 11/316 (3%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKS 96
N FE+AI KR+ + +L D + + STL +AC + LE G R++
Sbjct: 125 NGRFEDAIGVF---KRMSQESNL--KFDEGT--IVSTL-SACSALKNLEIGERIYRFV-V 175
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
+ F + I N L+D++ KCG L A+ +FD M D+++ W +M+ GY G +++AR L
Sbjct: 176 TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVL 235
Query: 157 FDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
F+ P +D W A ++GYV R EALE+FR MQ N F L S L A
Sbjct: 236 FERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDN-FVLVSLLTGCAQTGA 294
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
L GK IHGY+ + +D+VV +AL+D+Y KCG ++ A +F ++ ++D SWT++I+
Sbjct: 295 LEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYG 354
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEV-HGYMMRVGYDP 335
+G L+ ++ GVR + TF VL AC G+++ H R P
Sbjct: 355 LAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQP 414
Query: 336 GSFAGSALVDLYSKCG 351
S S L+DL + G
Sbjct: 415 KSEHCSCLIDLLCRAG 430
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 171/371 (46%), Gaps = 42/371 (11%)
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
+ FTL L + + + G+++HGY V+AGL+ D V ++L+ +Y G ++ +F
Sbjct: 45 DNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVF 104
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL-MGSGVRPNEYTFTGVLKACADHAAE 318
D+M +DVVSW +I +GR E+ +F+ + S ++ +E T L AC+
Sbjct: 105 DEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNL 164
Query: 319 HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI--------------- 363
+G+ ++ +++ ++ G+ALVD++ KCG A VF+ +
Sbjct: 165 EIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGY 223
Query: 364 ----------------PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFV 407
P D+V WT+++ G+ Q + D AL F + +G +PD V
Sbjct: 224 VSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLV 283
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
+L+ C G +++G ++ H ++ + ++D+ A+ G A + +
Sbjct: 284 SLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK- 341
Query: 468 KPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE----NPATYITLANIYANAGQWAE 523
+ D W SL+ G ++G ++ RA + +E+E + T++ + + G AE
Sbjct: 342 ERDTASWTSLIYGLAMNG---MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAE 398
Query: 524 EAKVRKDMEIR 534
K+ M R
Sbjct: 399 GRKIFHSMTER 409
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 129/252 (51%), Gaps = 9/252 (3%)
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
+LF +L G G+ P+ +T VLK+ G++VHGY ++ G + S+ ++L+ +
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK-SGTKPDQIT 405
Y+ G +I +VF+++P+ D+VSW LI + NG+ + A+ F+ + + S K D+ T
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
V LSAC+ ++ G + + + + + ++D+ + G ++A + D+M
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAVFDSM 208
Query: 466 SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP-ENPATYITLANIYANAGQWAEE 524
K K W S++ G G I+ A+ LFE P ++ + + N Y ++ E
Sbjct: 209 RDKNVK-CWTSMVFGYVSTGRIDEAR----VLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 525 AKVRKDMEIRGI 536
++ + M+ GI
Sbjct: 264 LELFRCMQTAGI 275
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 265/461 (57%), Gaps = 1/461 (0%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D+++ N +I Y K G R +FD M R+ + A ISG + + + L +F +
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSL 246
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M++ + N T S LAA + + G++IH L + G++ + + SAL+D+Y KCG
Sbjct: 247 MRRG-LVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCG 305
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
S+++A IF+ + D VS T ++ ++G EE F ++ +GV + + VL
Sbjct: 306 SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG 365
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
+ LGK++H +++ + +F + L+++YSKCG+ + VF ++P+ + VS
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS 425
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK 430
W S+I FA++G AL +E + KP +TF+ +L AC+H GL+DKG E + +K
Sbjct: 426 WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMK 485
Query: 431 EKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
E HG+ +HY C+ID+L R+G EA++ ID++ +KPD +W +LLG C HG+ E+
Sbjct: 486 EVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVG 545
Query: 491 KRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQ 550
+ AA LF+ P++ + +I +ANIY++ G+W E AK K M+ G+ K+ G S IEI+ +
Sbjct: 546 EYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHK 605
Query: 551 VHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVL 591
H F+V D HP+ I++ L L M +EGY PD F+L
Sbjct: 606 THSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 197/410 (48%), Gaps = 16/410 (3%)
Query: 134 LCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQK 193
L WN++++ YAK G L A KLFDEMP RD S N G++ R RE F ++++
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFL---RNRETESGFVLLKR 146
Query: 194 HESSNS-NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
S + TL+ L+ + K IH + +G D + V + L+ Y KCG
Sbjct: 147 MLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS 206
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
RG+FD M ++V++ T +I E+ E+G LF + V PN T+ L AC
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
+ G+++H + + G + SAL+D+YSKCG+ + A +F D VS T
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMT 326
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL---EYFHSI 429
++ G AQNG + A+ FF +L++G + D V+SA +D L + HS+
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEID----ANVVSAVLGVSFIDNSLGLGKQLHSL 382
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
K +I++ ++ G +++ + M K + W S++ HG+
Sbjct: 383 VIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLA 441
Query: 490 AKRAANAL--FEIEPENPATYITLANIYANAGQWAEEAKVRKDM-EIRGI 536
A + + E++P + T+++L + ++ G + ++ +M E+ GI
Sbjct: 442 ALKLYEEMTTLEVKPTD-VTFLSLLHACSHVGLIDKGRELLNEMKEVHGI 490
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 157/339 (46%), Gaps = 36/339 (10%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ Y + +AAC + + +G+++HAL + I + L+D+Y+KCGS+ DA +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F+ + D S ++ G A+ G E+A + F
Sbjct: 314 FESTTEVDEVSMTVILVGLAQNGSEEEAIQFF---------------------------- 345
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
RM+Q ++N +S+ L + L LGK++H +++ + V + L+++
Sbjct: 346 --IRMLQAGVEIDAN--VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINM 401
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KCG L +++ +F +M ++ VSW +MI G L+ ++ V+P + TF
Sbjct: 402 YSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTF 461
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
+L AC+ G+E+ M V G +P + + ++D+ + G K A + +P
Sbjct: 462 LSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLP 521
Query: 365 -RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
+PD W +L+G + +G + + E L + T PD
Sbjct: 522 LKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQ--TAPD 558
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 43/252 (17%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKS 96
N + EEAI + + +D + S ++ +L G+++H+L
Sbjct: 335 NGSEEEAIQFFIRMLQAGVEID---------ANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
F F++N L+++Y+KCG L D+Q +F M R+ SWN+MIA +A+ G A KL
Sbjct: 386 RKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKL 445
Query: 157 FDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
++EM + +P + T S L A + +
Sbjct: 446 YEEMTTLE--------------VKPTDV------------------TFLSLLHACSHVGL 473
Query: 217 LRLGKEIHGYLVRA-GLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMI 274
+ G+E+ + G++ ++ ++D+ G+ G L EA+ D + + D W ++
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
Query: 275 HRCFEDGRREEG 286
C G E G
Sbjct: 534 GACSFHGDTEVG 545
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 273/521 (52%), Gaps = 37/521 (7%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P Y+ + AC + + GR VH SS F G+
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVH----SSLFKVGL--------------------- 163
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+RD+ +++I YAK G + ARKLFDE+ RD SWN+ ISGY G ++A
Sbjct: 164 ------ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
+++FR M++ E ++ TL S L A + + LR G+ + + + L + S L+
Sbjct: 218 MDLFRKMEE-EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+YGKCG LD AR +F+QM+ KD V+WT MI ++G+ E F LF ++ +GV P+ T
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
+ VL AC A LGK++ + + + + LVD+Y KCG + A RVF +P
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
+ +W ++I +A G AL F+ + P ITF+GVLSAC HAGLV +G
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCR 453
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
YFH + GL+ +HY +IDLL+R+G +EA ++ KPD+ + A++LG C
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKR 513
Query: 485 GNIELAKRAANALFEI-EPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
++ + ++A L E+ E +N Y+ +N+ A+ W E AK+R M RG+VK PG S
Sbjct: 514 KDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCS 573
Query: 544 WIEIKRQVHVFLVG-DTSHPKIRDIHEFLGELSKKMKEEGY 583
WIEI+ ++ FL G D D L ++MK E Y
Sbjct: 574 WIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 614
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 200/414 (48%), Gaps = 10/414 (2%)
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSW 168
L L KC S+ +++ +M + N +I +LG + LF +H+S+
Sbjct: 40 FLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF 99
Query: 169 NAAISGYVSHGRPREA-LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
N I G + EA L ++R M K +KFT + A A + + +G+ +H L
Sbjct: 100 NYMIRGLTNTWNDHEAALSLYRRM-KFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSL 158
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGF 287
+ GL+ D + +L+ +Y KCG + AR +FD++ ++D VSW +MI E G ++
Sbjct: 159 FKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAM 218
Query: 288 SLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLY 347
LFR + G P+E T +L AC+ G+ + + +F GS L+ +Y
Sbjct: 219 DLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMY 278
Query: 348 SKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFV 407
KCG+ A RVFNQ+ + D V+WT++I ++QNG+ A F + K+G PD T
Sbjct: 279 GKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLS 338
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
VLSAC G ++ G + + + L H ++D+ + GR EA + + M +
Sbjct: 339 TVLSACGSVGALELG-KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV 397
Query: 468 KPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYANAG 519
K ++ W +++ G+ + A LF+ P + T+I + + +AG
Sbjct: 398 K-NEATWNAMITAYAHQGH----AKEALLLFDRMSVPPSDITFIGVLSACVHAG 446
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 282/544 (51%), Gaps = 44/544 (8%)
Query: 88 RRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKL 147
R H + + N LL LY K G + DA LF EM R+ SWN MI G+++
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 148 GWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
E A K+F+ M R D +W + +S + G+ + L+ F +M+ ++ S +
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE-A 296
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK--------------- 248
L+ + A + L + +++HGY+++ G + +AL+ +YGK
Sbjct: 297 LAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR 356
Query: 249 ----------------CGSLDEARGIFDQM--------VDKDVVSWTTMIHRCFEDGRRE 284
G LDEA +F ++ V +VV+WT++I C GR +
Sbjct: 357 NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 285 EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV 344
+ FR + S V N T +L CA+ A +LG+E+HG+++R +ALV
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 345 DLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
++Y+KCG S VF I DL+SW S+I G+ +G ++AL F+ ++ SG PD I
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Query: 405 TFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDN 464
V VLSAC+HAGLV+KG E F+S+ ++ GL +HYAC++DLL R G EA I+ N
Sbjct: 537 ALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKN 596
Query: 465 MSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEE 524
M ++P + +LL CR+H N+++A+ A+ L +EPE +Y+ L+NIY+ G+W E
Sbjct: 597 MPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEES 656
Query: 525 AKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYV 584
A VR + + + K G SWIE+K++ + F G + I+ L +L M ++G
Sbjct: 657 ANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPT 716
Query: 585 PDTN 588
D N
Sbjct: 717 HDGN 720
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
+ + C AL +VH F + N L+ +Y K G + DA+ LF ++ +
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHF--------SWNAAISGYVSHGRPRE 183
+ + SWN++I + G L++A LF E+ +H +W + I G GR +
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
+LE FR MQ +N T+ L+ A +P L LG+EIHG+++R + + +V +AL+
Sbjct: 418 SLEYFRQMQ-FSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
++Y KCG L E +F+ + DKD++SW ++I G E+ S+F ++ SG P+
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Query: 304 TFTGVLKACADHAAEHLGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
VL AC+ G+E+ M R G +P + +VDL + G K AS +
Sbjct: 537 ALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKN 596
Query: 363 IP 364
+P
Sbjct: 597 MP 598
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 173/419 (41%), Gaps = 74/419 (17%)
Query: 85 EQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGY 144
+Q R+VHA S+FI + GSLA +I+ Y
Sbjct: 70 QQCRQVHAQVLLSDFI-------------FRSGSLAA-----------------NLISVY 99
Query: 145 AKLGWLEQARKLFDEMPR---RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNK 201
A+LG L AR +F+ + D WN+ + VSHG ALE++R M + +
Sbjct: 100 ARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGM-RQRGLTGDG 158
Query: 202 FTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ 261
+ L L A + L + H +++ GL + V + LL LY K G + +A +F +
Sbjct: 159 YILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVE 218
Query: 262 MVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL------------ 309
M ++ +SW MI ++ E +F + +P+E T+T VL
Sbjct: 219 MPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDV 278
Query: 310 -----------------------KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
CA+ A + ++VHGY+++ G++ + +AL+ +
Sbjct: 279 LKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHV 338
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF----ELLLKSGTKPD 402
Y K G K A +F QI + SW SLI F G+ D AL F E+ K +
Sbjct: 339 YGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKAN 398
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
+T+ V+ C G D LEYF ++ L ++ C++ + A N I
Sbjct: 399 VVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT-ICCILSICAELPALNLGREI 456
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 192/620 (30%), Positives = 299/620 (48%), Gaps = 86/620 (13%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + ++AC + + QG VH++ FI + + N L+D+Y+KC
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC--------- 400
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
G LE ARK+FD + +D ++WN+ I+GY G +A
Sbjct: 401 ----------------------GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAY 438
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
E+F MQ A L + + W+ ++
Sbjct: 439 ELFTRMQD------------------------------------ANLRPNIITWNTMISG 462
Query: 246 YGKCGSLDEARGIFDQM-----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRP 300
Y K G EA +F +M V ++ +W +I ++G+++E LFR + S P
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVF 360
N T +L ACA+ + +E+HG ++R D +AL D Y+K G+ + + +F
Sbjct: 523 NSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF 582
Query: 361 NQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD 420
+ D+++W SLIGG+ +G AL F + G P++ T ++ A G VD
Sbjct: 583 LGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVD 642
Query: 421 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+G + F+SI + ++ +H + ++ L R+ R EA I M+I+ + +W S L G
Sbjct: 643 EGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTG 702
Query: 481 CRIHGNIELAKRAANALFEIEPENPATYITLANIY---ANAGQWAEEAKVRKDMEIRGIV 537
CRIHG+I++A AA LF +EPEN AT ++ IY A G+ E K R+D ++
Sbjct: 703 CRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRD----NLL 758
Query: 538 KKP-GKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEE 596
KKP G+SWIE++ +H F GD S + + L L +KM D +EE
Sbjct: 759 KKPLGQSWIEVRNLIHTFTTGDQS----KLCTDVLYPLVEKMSRLDNRSDQYNGELWIEE 814
Query: 597 EQKEQNLFYHSEKLAVAFGIISTPPG--TPIKVFKNLRTCVDCHTAMKYTSKIVQRKIIL 654
E +E+ HSEK A+AFG+IS+ T I++ KNLR C DCH KY SK I+L
Sbjct: 815 EGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILL 874
Query: 655 RDSNRFHCFEDGSCSCKDYW 674
D+ H F++G CSCKDYW
Sbjct: 875 EDTRCLHHFKNGDCSCKDYW 894
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/560 (25%), Positives = 254/560 (45%), Gaps = 90/560 (16%)
Query: 41 EEAINALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALTKS 96
+E + LC+ L EA L + + ++ Y L+ +C+ ++ GR +HA +
Sbjct: 50 DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA--RF 107
Query: 97 SNFI-PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARK 155
F P +F+ +LL +YAKCG +ADA+++FD M +R+L +W+ MI Y++
Sbjct: 108 GLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSR--------- 158
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
R RE ++FR+M K + + F L A
Sbjct: 159 ----------------------ENRWREVAKLFRLMMK-DGVLPDDFLFPKILQGCANCG 195
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
+ GK IH +++ G+ V +++L +Y KCG LD A F +M ++DV++W +++
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
++G+ EE L +++ G+ P T+ ++ LGK
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG-----GYNQLGK------------- 297
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
A +DL K I + VF +WT++I G NG +AL F +
Sbjct: 298 ----CDAAMDLMQKMETFGITADVF---------TWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+G P+ +T + +SAC+ ++++G E HSI K G + ++D+ ++ G+
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSE-VHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 456 NEAENIIDNMSIKPDKFLWASLLGGCRIHG----NIELAKRAANALFEIEPENPATYITL 511
+A + D++ K D + W S++ G G EL R +A + P N T+ T+
Sbjct: 404 EDARKVFDSVKNK-DVYTWNSMITGYCQAGYCGKAYELFTRMQDA--NLRP-NIITWNTM 459
Query: 512 ANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFL 571
+ Y G E + + ME G V++ +W ++ + G + K +D E L
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW-------NLIIAGYIQNGK-KD--EAL 509
Query: 572 GELSKKMKEEGYVPDTNFVL 591
EL +KM+ ++P++ +L
Sbjct: 510 -ELFRKMQFSRFMPNSVTIL 528
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 208/488 (42%), Gaps = 66/488 (13%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+S +I A R + ++ L +P F+ ++L A CG + + + +
Sbjct: 149 WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI 208
Query: 131 DRDLCSW----NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALE 186
+ S N+++A YAK G L+ A K F M RD +WN+ + Y +G+ EA+E
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVE 268
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
+ + M+K +S GL V W+ L+ Y
Sbjct: 269 LVKEMEKE--------GISPGL----------------------------VTWNILIGGY 292
Query: 247 GKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
+ G D A + +M + DV +WT MI +G R + +FR + +GV PN
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
T + AC+ + G EVH +++G+ G++LVD+YSKCG + A +VF+
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 363 IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
+ D+ +W S+I G+ Q G +A F + + +P+ IT+ ++S G +
Sbjct: 413 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 423 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK---PDKFLWASLLG 479
++ F +++ + + +I ++G+ +EA + M P+ SLL
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 480 GC----------RIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRK 529
C IHG + +R +A+ ++ L + YA +G +
Sbjct: 533 ACANLLGAKMVREIHGCV--LRRNLDAIHAVKN-------ALTDTYAKSGDIEYSRTIFL 583
Query: 530 DMEIRGIV 537
ME + I+
Sbjct: 584 GMETKDII 591
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 26/241 (10%)
Query: 55 EAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHAL-----TKSSNFIPGIFISNRL 109
EA+DL +++ +T + ++ G++ AL + S F+P S +
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN---SVTI 527
Query: 110 LDLYAKCGSLADAQRLFDEMG---DRDLCSW----NTMIAGYAKLGWLEQARKLFDEMPR 162
L L C +L A+ + + G R+L + N + YAK G +E +R +F M
Sbjct: 528 LSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
+D +WN+ I GYV HG AL +F M K + N+ TLSS + A + + GK+
Sbjct: 588 KDIITWNSLIGGYVLHGSYGPALALFNQM-KTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 223 I-----HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMIHR 276
+ + Y + L+ SA++ LYG+ L+EA +M + + W + +
Sbjct: 647 VFYSIANDYHIIPALEH----CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTG 702
Query: 277 C 277
C
Sbjct: 703 C 703
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 284/525 (54%), Gaps = 34/525 (6%)
Query: 54 KEAVDLLHHVDRPSPRL-YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDL 112
+EA+ L ++ + + +T++ AC AL+ G+++HA +++ L+++
Sbjct: 172 EEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV 231
Query: 113 YAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAI 172
YAKCG L A + +++ + D S + +I+GYA G + ++R LFD R WN+ I
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMI 291
Query: 173 SGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL 232
SGY+++ EAL +F M+ +S TL++ + A + L GK++H + + GL
Sbjct: 292 SGYIANNMKMEALVLFNEMRNETREDSR--TLAAVINACIGLGFLETGKQMHCHACKFGL 349
Query: 233 DLDEVVWSALLDLYGKCGS-------------------------------LDEARGIFDQ 261
D VV S LLD+Y KCGS +D+A+ +F++
Sbjct: 350 IDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFER 409
Query: 262 MVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
+ +K ++SW +M + ++G E F + + +E + + V+ ACA ++ LG
Sbjct: 410 IENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELG 469
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQN 381
++V VG D S+L+DLY KCG + RVF+ + + D V W S+I G+A N
Sbjct: 470 EQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATN 529
Query: 382 GQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADH 441
GQ A+ F+ + +G +P QITF+ VL+AC + GLV++G + F S+K HG + +H
Sbjct: 530 GQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEH 589
Query: 442 YACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIE 501
++C++DLLAR+G EA N+++ M D +W+S+L GC +G + K+AA + E+E
Sbjct: 590 FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELE 649
Query: 502 PENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
PEN Y+ L+ I+A +G W A VRK M + K PG SW +
Sbjct: 650 PENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 230/543 (42%), Gaps = 105/543 (19%)
Query: 52 RLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFI-SNRLL 110
R + L ++ R Y L+ +C R+ + L F+ I I +N LL
Sbjct: 10 RFYLSSSFLQAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLL 69
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNA 170
+Y++ G + A+ LFDEM DR+ SWNTMI GY G + + FD MP RD +SWN
Sbjct: 70 QMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNV 129
Query: 171 AIS-------------------------------GYVSHGRPREALEMFRMMQKHESSNS 199
+S GY+ +G EAL +F K + ++
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF----KELNFSA 185
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL------- 252
+ TL++ L A A + L+ GK+IH ++ G++ D + S+L+++Y KCG L
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 253 ------------------------DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFS 288
+E+RG+FD+ ++ V+ W +MI + + E
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 289 LFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYS 348
LF + M + R + T V+ AC GK++H + + G S L+D+YS
Sbjct: 306 LFNE-MRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 349 KCG--------------------NTKI-----------ASRVFNQIPRPDLVSWTSLIGG 377
KCG N+ I A RVF +I L+SW S+ G
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
F+QNG L +F + K D+++ V+SAC ++ G + F GL
Sbjct: 425 FSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR-ATIVGLDS 483
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN----IELAKRA 493
+ +IDL + G + D M +K D+ W S++ G +G I+L K+
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
Query: 494 ANA 496
+ A
Sbjct: 543 SVA 545
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 99/217 (45%), Gaps = 11/217 (5%)
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPG-SFAGSALVDLYSKCGNTKIASRVFNQI 363
+ +L++C+ E L ++ +G +++ G+ + L+ +YS+ G IA +F+++
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
P + SW ++I G+ +G+ +L FF+++ + D ++ V+S AG +
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSGFAKAGELSVAR 144
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
F+++ EK + + + +++ G EA + ++ D ++L C
Sbjct: 145 RLFNAMPEKDVVTLNSLLHGYILN-----GYAEEALRLFKELNFSADAITLTTVLKACAE 199
Query: 484 HGNIELAKRA-ANALFEIEPENPATYITLANIYANAG 519
++ K+ A L + +L N+YA G
Sbjct: 200 LEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG 236
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 302/542 (55%), Gaps = 18/542 (3%)
Query: 51 KRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTK--------SSNFIPG 102
+R+++A + + P+ ++ LIA V+ R ++ + L + + F P
Sbjct: 150 ERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPL 209
Query: 103 IFISNRLLDLYAKCGSLADAQRLFDEMG-DRDLCSWNTMIAGYAKLGWLEQARKLFDEMP 161
+ LLD C L ++G ++ N MI+ YA G + A+++FD +
Sbjct: 210 L----TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLG 265
Query: 162 -RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLG 220
+D SWN+ I+G+ H A E+F MQ+H ++ +T + L+A + G
Sbjct: 266 GSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV-ETDIYTYTGLLSACSGEEHQIFG 324
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGK--CGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
K +HG +++ GL+ +AL+ +Y + G++++A +F+ + KD++SW ++I
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA 384
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
+ G E+ F L S ++ ++Y F+ +L++C+D A LG+++H + G+ F
Sbjct: 385 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF 444
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
S+L+ +YSKCG + A + F QI + V+W ++I G+AQ+G +L F +
Sbjct: 445 VISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQ 504
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
K D +TF +L+AC+H GL+ +GLE + ++ + + +HYA +DLL R+G N+
Sbjct: 505 NVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNK 564
Query: 458 AENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYAN 517
A+ +I++M + PD + + LG CR G IE+A + AN L EIEPE+ TY++L+++Y++
Sbjct: 565 AKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSD 624
Query: 518 AGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKK 577
+W E+A V+K M+ RG+ K PG SWIEI+ QV F D S+P +DI+ + +L+++
Sbjct: 625 LKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQE 684
Query: 578 MK 579
M+
Sbjct: 685 MQ 686
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 205/459 (44%), Gaps = 74/459 (16%)
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
I I++SNR+LD Y K G L A LFDEM RD SWNTMI+GY G LE A LF
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 160 MPRR----DHFSWNAAISGYVS----------HG-------------------------R 180
M R D +S++ + G S HG R
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 181 PREALEMFRMMQKHESSNSN--------------KFTLSSGLAAAAAI--------PCL- 217
+A E F+ + + S + N F L + AA+ P L
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 218 --------RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVV 268
L K++H +++ GL + + +A++ Y CGS+ +A+ +FD + KD++
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 269 SWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYM 328
SW +MI + +E F LF + V + YT+TG+L AC+ + GK +HG +
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 329 MRVGYDPGSFAGSALVDLYSK--CGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
++ G + + A +AL+ +Y + G + A +F + DL+SW S+I GFAQ G +
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
A+ FF L S K D F +L +C+ + G + H++ K G + + +I
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKSGFVSNEFVISSLI 450
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
+ ++ G A +S K W +++ G HG
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 186/372 (50%), Gaps = 23/372 (6%)
Query: 115 KCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISG 174
KCGS++D + N ++ Y K G+L A LFDEMP+RD SWN ISG
Sbjct: 28 KCGSISD------------IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 175 YVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL 234
Y S G+ +A +F M K S+ + ++ S L A++ LG+++HG +++ G +
Sbjct: 76 YTSCGKLEDAWCLFTCM-KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL- 293
+ V S+L+D+Y KC +++A F ++ + + VSW +I + + F L +
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 294 MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT 353
M + V + TF +L D +L K+VH ++++G +A++ Y+ CG+
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 354 KIASRVFNQI-PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
A RVF+ + DL+SW S+I GF+++ + A F + + + D T+ G+LSA
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 413 CT--HAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR--SGRFNEAENIIDNMSIK 468
C+ + K L H + K GL +I + + +G +A ++ +++ K
Sbjct: 315 CSGEEHQIFGKSL---HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Query: 469 PDKFLWASLLGG 480
D W S++ G
Sbjct: 372 -DLISWNSIITG 382
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 5/279 (1%)
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRR 283
H Y ++ G D V + +LD Y K G L A +FD+M +D VSW TMI G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 284 EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSAL 343
E+ + LF + SG + Y+F+ +LK A LG++VHG +++ GY+ + GS+L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 344 VDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELL-LKSGTKPD 402
VD+Y+KC + A F +I P+ VSW +LI GF Q A L+ +K+ D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
TF +L+ + L+ H+ K GL H +I A G ++A+ +
Sbjct: 203 AGTFAPLLTLLDDPMFCNL-LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 463 DNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIE 501
D + D W S++ G H EL + A +++
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKH---ELKESAFELFIQMQ 297
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 263/461 (57%), Gaps = 10/461 (2%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRD-HFSWNAAISGYVSHGRPREALEMFR 189
D D + ++ Y+K +E A+K+FDE+P RD WNA ++GY R +AL +F
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
M + E ++ T++S L+A + G+ IHG V+ G D VV +AL+D+YGK
Sbjct: 252 KM-REEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKS 310
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFED--GRREEGFSLFRDLMGSGVRPNEYTFTG 307
L+EA IF+ M ++D+ +W +++ C D G + +LF ++ SG+RP+ T T
Sbjct: 311 KWLEEANSIFEAMDERDLFTWNSVL--CVHDYCGDHDGTLALFERMLCSGIRPDIVTLTT 368
Query: 308 VLKACADHAAEHLGKEVHGYMMRVGY----DPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
VL C A+ G+E+HGYM+ G F ++L+D+Y KCG+ + A VF+ +
Sbjct: 369 VLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSM 428
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
D SW +I G+ + AL F + ++G KPD+ITFVG+L AC+H+G +++G
Sbjct: 429 RVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGR 488
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
+ ++ + ++ T+DHYACVID+L R+ + EA + + I + +W S+L CR+
Sbjct: 489 NFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRL 548
Query: 484 HGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
HGN +LA A L E+EPE+ Y+ ++N+Y AG++ E VR M + + K PG S
Sbjct: 549 HGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCS 608
Query: 544 WIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYV 584
WI +K VH F G+ +HP+ + IH++L + M Y+
Sbjct: 609 WIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 191/402 (47%), Gaps = 13/402 (3%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
+++ YAK G + +A +F RD F +NA ISG+V +G P +A+E +R M+ +
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRAN-GI 157
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
+K+T S L + A+ L K++HG + G D D V S L+ Y K S+++A+
Sbjct: 158 LPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQK 216
Query: 258 IFDQMVDK-DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+FD++ D+ D V W +++ + R E+ +F + GV + +T T VL A
Sbjct: 217 VFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSG 276
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
G+ +HG ++ G +AL+D+Y K + A+ +F + DL +W S++
Sbjct: 277 DIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC 336
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G D L FE +L SG +PD +T VL C + +G E H GL+
Sbjct: 337 VHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGRE-IHGYMIVSGLL 395
Query: 437 HTADH----YACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKR 492
+ + ++D+ + G +A + D+M +K D W ++ G + ELA
Sbjct: 396 NRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK-DSASWNIMINGYGVQSCGELALD 454
Query: 493 AANALFE--IEPENPATYITLANIYANAGQWAEEAKVRKDME 532
+ + ++P+ T++ L +++G E ME
Sbjct: 455 MFSCMCRAGVKPDE-ITFVGLLQACSHSGFLNEGRNFLAQME 495
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 163/328 (49%), Gaps = 19/328 (5%)
Query: 220 GKEIHGYLVRAG-LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
G++IHG++VR G LD ++L+++Y KCG + A +F ++DV + +I
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFV 137
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
+G + +R++ +G+ P++YTF +LK +D K+VHG ++G+D +
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCY 196
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
GS LV YSK + + A +VF+++P R D V W +L+ G++Q + + AL F + +
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G + T VLSA T +G +D G H + K G +ID+ +S E
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNG-RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 458 AENIIDNMSIKPDKFLWASLL---GGCRIH-GNIELAKRAANALFEIEPENPATYITLAN 513
A +I + M + D F W S+L C H G + L +R + I P+ +TL
Sbjct: 316 ANSIFEAMD-ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS--GIRPD----IVTLTT 368
Query: 514 IYANAGQWAEEAKVRKDMEIRGIVKKPG 541
+ G+ A +R+ EI G + G
Sbjct: 369 VLPTCGRL---ASLRQGREIHGYMIVSG 393
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 162/356 (45%), Gaps = 49/356 (13%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
FE+A+ L K +E V + H +++++A ++ GR +H L +
Sbjct: 243 FEDAL--LVFSKMREEGVGVSRHT-------ITSVLSAFTVSGDIDNGRSIHGLAVKTGS 293
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
I +SN L+D+Y K L +A +F+ M +RDL +WN+++ + G + LF+
Sbjct: 294 GSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFER 353
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M S RP + TL++ L + LR
Sbjct: 354 M--------------LCSGIRP------------------DIVTLTTVLPTCGRLASLRQ 381
Query: 220 GKEIHGYLVRAGL----DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
G+EIHGY++ +GL +E + ++L+D+Y KCG L +AR +FD M KD SW MI+
Sbjct: 382 GREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMIN 441
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYD- 334
E +F + +GV+P+E TF G+L+AC+ + G+ M V Y+
Sbjct: 442 GYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV-YNI 500
Query: 335 -PGSFAGSALVDLYSKCGNTKIASRVFNQIPRPD-LVSWTSLIGGFAQNGQPDRAL 388
P S + ++D+ + + A + P D V W S++ +G D AL
Sbjct: 501 LPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY-DPGSFAGSALVDLYSKCGNTKIASRV 359
N T L+ CA G+++HG+M+R G+ D AG++LV++Y+KCG + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 360 FNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLV 419
F R D+ + +LI GF NG P A+ + + +G PD+ TF +L L
Sbjct: 119 FGGSER-DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 420 DKGLEYFHSIKEKHGLMHT----ADHY--ACVIDLLARSGRFNEAENIIDNMSIKPDKFL 473
D +K+ HGL +D Y + ++ ++ +A+ + D + + D L
Sbjct: 178 D--------VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVL 229
Query: 474 WASLLGG 480
W +L+ G
Sbjct: 230 WNALVNG 236
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 290/536 (54%), Gaps = 17/536 (3%)
Query: 53 LKEAVDLLHHVD-RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLD 111
++EA +L VD R + ++ +++ +R + L + N + N ++D
Sbjct: 93 MREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSW----NTMID 148
Query: 112 LYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAA 171
YA+ G + A LFDEM +R++ SWN+M+ + G +++A LF+ MPRRD SW A
Sbjct: 149 GYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAM 208
Query: 172 ISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAG 231
+ G +G+ EA +F M + + N + +G A I + L +
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPERNIISWN--AMITGYAQNNRI-------DEADQLFQVM 259
Query: 232 LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFR 291
+ D W+ ++ + + +++A G+FD+M +K+V+SWTTMI E+ EE ++F
Sbjct: 260 PERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFS 319
Query: 292 DLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKC 350
++ G V+PN T+ +L AC+D A G+++H + + + SAL+++YSK
Sbjct: 320 KMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKS 379
Query: 351 GNTKIASRVFNQ--IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVG 408
G A ++F+ + + DL+SW S+I +A +G A+ + + K G KP +T++
Sbjct: 380 GELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLN 439
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK 468
+L AC+HAGLV+KG+E+F + L +HY C++DL R+GR + N I+ +
Sbjct: 440 LLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDAR 499
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVR 528
+ + ++L C +H + +AK + E ++ TY+ ++NIYA G+ E A++R
Sbjct: 500 LSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMR 559
Query: 529 KDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYV 584
M+ +G+ K+PG SW+++ +Q H+F+VGD SHP+ + L +L KM++ V
Sbjct: 560 MKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNV 615
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 246/418 (58%), Gaps = 2/418 (0%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D+D +++ YA+LG +E A+K+FDE+P R+ W + GY+ + + E +F +
Sbjct: 141 DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCL 200
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR-AGLDLDEVVWSALLDLYGKC 249
M + + TL + A + ++GK +HG +R + +D + + ++++D+Y KC
Sbjct: 201 M-RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
LD AR +F+ VD++VV WTT+I + R E F LFR ++ + PN+ T +L
Sbjct: 260 RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
+C+ + GK VHGYM+R G + + ++ +D+Y++CGN ++A VF+ +P +++
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVI 379
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
SW+S+I F NG + AL F + P+ +TFV +LSAC+H+G V +G + F S+
Sbjct: 380 SWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
+G++ +HYAC++DLL R+G EA++ IDNM +KP W +LL CRIH ++L
Sbjct: 440 TRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDL 499
Query: 490 AKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEI 547
A A L +EPE + Y+ L+NIYA+AG W VR+ M I+G K G+S E+
Sbjct: 500 AGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 200/405 (49%), Gaps = 19/405 (4%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMP--RRDHFSWNAAISGYVSHGRP--REALEMFRMMQK 193
+++ Y + L+ A F+ +P +R+ SWN +SGY + L ++ M++
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR 102
Query: 194 HESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLD 253
H + F L + A + L G IHG ++ GLD D+ V +L+++Y + G+++
Sbjct: 103 H-CDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTME 161
Query: 254 EARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACA 313
A+ +FD++ ++ V W ++ + + E F LF + +G+ + T ++KAC
Sbjct: 162 SAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACG 221
Query: 314 DHAAEHLGKEVHGYMMRVGY-DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
+ A +GK VHG +R + D + ++++D+Y KC A ++F ++V WT
Sbjct: 222 NVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWT 281
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
+LI GFA+ + A F +L+ P+Q T +L +C+ G + G + H +
Sbjct: 282 TLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHG-KSVHGYMIR 340
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL--WASLLGGCRIHGNIELA 490
+G+ A ++ ID+ AR G A + D M P++ + W+S++ I+G L
Sbjct: 341 NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMM---PERNVISWSSMINAFGING---LF 394
Query: 491 KRAANALFEIEPE----NPATYITLANIYANAGQWAEEAKVRKDM 531
+ A + +++ + N T+++L + +++G E K + M
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 182/366 (49%), Gaps = 42/366 (11%)
Query: 74 LIAACVRHRALEQGRRVHALTKSSNFI-PGIFISNRLLDLYAKCGSLADAQRLFDEMGDR 132
L+ AC A + G+ VH ++ +FI ++ ++D+Y KC L +A++LF+ DR
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
++ W T+I+G+AK R EA ++FR M
Sbjct: 276 NVVMWTTLISGFAKC-------------------------------ERAVEAFDLFRQML 304
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
+ ES N+ TL++ L + +++ LR GK +HGY++R G+++D V +++ +D+Y +CG++
Sbjct: 305 R-ESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
AR +FD M +++V+SW++MI+ +G EE F + V PN TF +L AC
Sbjct: 364 QMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Query: 313 ADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVS 370
+ G + M R G P + +VDL + G A + +P +P +
Sbjct: 424 SHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASA 483
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL-EYFHSI 429
W +L+ + + D A E LL +P++ + V VL + +A D G+ E + +
Sbjct: 484 WGALLSACRIHKEVDLAGEIAEKLLS--MEPEK-SSVYVLLSNIYA---DAGMWEMVNCV 537
Query: 430 KEKHGL 435
+ K G+
Sbjct: 538 RRKMGI 543
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ + +R EA DL + R P+ + ++ +C +L G+ VH +
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI 343
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+D+YA+CG++ A+ +FD M +R++ SW++MI + G E+A F +
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M K ++ N T S L+A + ++
Sbjct: 404 M--------------------------------KSQNVVPNSVTFVSLLSACSHSGNVKE 431
Query: 220 G-KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS-WTTMIHRC 277
G K+ G+ +E ++ ++DL G+ G + EA+ D M K + S W ++ C
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP--RPDLVSWTSLIGGFA 379
++VH ++ G++ GS+L + Y + A+ FN+IP + + SW +++ G++
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 380 QNGQP--DRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
++ L + + + D V + AC GL++ G+ H + K+GL
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI-LIHGLAMKNGL-- 140
Query: 438 TADHYAC--VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
D Y ++++ A+ G A+ + D + ++ + LW L+ G
Sbjct: 141 DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLMKG 184
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 298/609 (48%), Gaps = 65/609 (10%)
Query: 34 AKTNNNFEEAINALCQQK-RLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHA 92
+ ++ I A+ + K L +A +L + + Y+T+I VR ++ ++A
Sbjct: 109 VRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 93 LTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQ 152
T F + SN LL Y + G +A R+F M +++ S ++M+ GY K+G +
Sbjct: 169 ETPV-KFRDSV-ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
AR LFD M R+ +W A I GY G + +F M++ N TL+ A
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 213 AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG---------------------- 250
R G +IHG + R L+ D + ++L+ +Y K G
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 251 ---------SLDEARGIFDQMVDKDVVSWTTMIH---------RCFE------------- 279
+ EA +F++M KD+VSWT MI +C E
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 280 ---------DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR 330
+G EE F ++ V PN YTF+ VL A A A G ++HG +++
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 331 VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHF 390
+ ++LV +Y KCGNT A ++F+ I P++VS+ ++I G++ NG +AL
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 391 FELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLA 450
F +L SG +P+ +TF+ +LSAC H G VD G +YF S+K + + DHYAC++DLL
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLG 586
Query: 451 RSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYIT 510
RSG ++A N+I M KP +W SLL + H ++LA+ AA L E+EP++ Y+
Sbjct: 587 RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVV 646
Query: 511 LANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEF 570
L+ +Y+ G+ + ++ + + I K PG SWI +K +VH FL GD S + +I
Sbjct: 647 LSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFT 706
Query: 571 LGELSKKMK 579
L + K+M+
Sbjct: 707 LKMIRKEME 715
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 216/461 (46%), Gaps = 58/461 (12%)
Query: 69 RLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDE 128
R STL A H + Q R T +++ IF N + +A+ G+L +A+ +F +
Sbjct: 20 RCNSTL--AVSNHEPITQKTRNFLETTTTS--TAIFQCNSQISKHARNGNLQEAEAIFRQ 75
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHG-RPREALEM 187
M +R + SW MI+ YA+ G + +A ++FDEMP R S+NA I+ + + +A E+
Sbjct: 76 MSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYEL 135
Query: 188 F-RMMQKHESSNSNKFTLSSGLAAA----------AAIPC---------------LRLGK 221
F + +K+ S + T+ +G A A P LR GK
Sbjct: 136 FCDIPEKNAVSYA---TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGK 192
Query: 222 EIHGYLVRAGLDLDEVV-WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
V G+ + EVV S+++ Y K G + +AR +FD+M +++V++WT MI F+
Sbjct: 193 WNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKA 252
Query: 281 GRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
G E+GF LF + G V+ N T + KAC D G ++HG + R+ + F
Sbjct: 253 GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFL 312
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
G++L+ +YSK G A VF + D VSW SLI G Q Q A FE +
Sbjct: 313 GNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----P 368
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
D +++ ++ + G + K +E F + EK + TA +I +G + EA
Sbjct: 369 GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTA-----MISAFVSNGYYEEAL 423
Query: 460 NIIDNM---SIKPDKFLWASLLG----------GCRIHGNI 487
M + P+ + ++S+L G +IHG +
Sbjct: 424 CWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 266/497 (53%), Gaps = 38/497 (7%)
Query: 85 EQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGY 144
E G+++H L F + ++N LL++YAK + A+ +F EM + ++ SWN MI G+
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 325
Query: 145 A-----------------------------------KLGWLEQARKLFDEMPRRDHFSWN 169
+ G +E R++F +P+ +WN
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWN 385
Query: 170 AAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR 229
A +SGY ++ EA+ FR MQ ++ +K TLS L++ A + L GK+IHG ++R
Sbjct: 386 AMLSGYSNYEHYEEAISNFRQMQ-FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 230 AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK-DVVSWTTMIHRCFEDGRREEGFS 288
+ + + S L+ +Y +C ++ + IFD +++ D+ W +MI + +
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 289 LFRDLMGSGVR-PNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLY 347
LFR + + V PNE +F VL +C+ + G++ HG +++ GY SF +AL D+Y
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMY 564
Query: 348 SKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFV 407
KCG A + F+ + R + V W +I G+ NG+ D A+ + ++ SG KPD ITFV
Sbjct: 565 CKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFV 624
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
VL+AC+H+GLV+ GLE S++ HG+ DHY C++D L R+GR +AE + +
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPY 684
Query: 468 KPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKV 527
K LW LL CR+HG++ LA+R A L ++P++ A Y+ L+N Y++ QW + A +
Sbjct: 685 KSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAAL 744
Query: 528 RKDMEIRGIVKKPGKSW 544
+ M + K PG+SW
Sbjct: 745 QGLMNKNRVHKTPGQSW 761
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 212/434 (48%), Gaps = 26/434 (5%)
Query: 65 RPSPRLYSTLIAACVR-HRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQ 123
R Y + C R R G+ +H ++ NRLLDLY +CG A+
Sbjct: 2 RSGGNKYLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYAR 61
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
++FDEM RD+ SWN + K+G L +A ++FD MP RD SWN IS V G +
Sbjct: 62 KVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEK 121
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
AL +++ M + ++FTL+S L+A + + G HG V+ GLD + V +ALL
Sbjct: 122 ALVVYKRMV-CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALL 180
Query: 244 DLYGKCGSL-DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
+Y KCG + D +F+ + + VS+T +I + + E +FR + GV+ +
Sbjct: 181 SMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDS 240
Query: 303 YTFTGVLKACA-----DHAAE----HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT 353
+ +L A D +E LGK++H +R+G+ ++L+++Y+K +
Sbjct: 241 VCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDM 300
Query: 354 KIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC 413
A +F ++P ++VSW +I GF Q + D+++ F + SG +P+++T + VL AC
Sbjct: 301 NGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC 360
Query: 414 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM------SI 467
+G V+ G F SI + A +L+ + E I N ++
Sbjct: 361 FRSGDVETGRRIFSSIPQPSVSAWNA--------MLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 468 KPDKFLWASLLGGC 481
KPDK + +L C
Sbjct: 413 KPDKTTLSVILSSC 426
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 34/335 (10%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P S ++++C R R LE G+++H + + I + L+ +Y++C + ++
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 125 LFDE-MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
+FD+ + + D+ WN+MI+G+ + D +
Sbjct: 473 IFDDCINELDIACWNSMISGF--------RHNMLDT-----------------------K 501
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
AL +FR M + N+ + ++ L++ + + L G++ HG +V++G D V +AL
Sbjct: 502 ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALT 561
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
D+Y KCG +D AR FD ++ K+ V W MIH +GR +E L+R ++ SG +P+
Sbjct: 562 DMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGI 621
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
TF VL AC+ G E+ M R+ G +P +VD + G + A ++
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEA 681
Query: 363 IP-RPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
P + V W L+ +G A E L++
Sbjct: 682 TPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMR 716
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 262/473 (55%), Gaps = 32/473 (6%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N I +A G +E ARK+FDE P RD SWN I+GY G +A+ ++++M+ E
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES-EGV 253
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
+ T+ +++ + + L GKE + Y+ GL + + +AL+D++ KCG + EAR
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARR 313
Query: 258 IFDQMVDKDVVSWTTMIH---RC---------FED-------------------GRREEG 286
IFD + + +VSWTTMI RC F+D R ++
Sbjct: 314 IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 373
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
+LF+++ S +P+E T L AC+ A +G +H Y+ + G++LVD+
Sbjct: 374 LALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 433
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y+KCGN A VF+ I + +++T++IGG A +G A+ +F ++ +G PD+ITF
Sbjct: 434 YAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITF 493
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
+G+LSAC H G++ G +YF +K + L HY+ ++DLL R+G EA+ ++++M
Sbjct: 494 IGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP 553
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAK 526
++ D +W +LL GCR+HGN+EL ++AA L E++P + Y+ L +Y A W + +
Sbjct: 554 MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKR 613
Query: 527 VRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMK 579
R+ M RG+ K PG S IE+ V F+V D S P+ I++ L L + M+
Sbjct: 614 ARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 171/321 (53%), Gaps = 3/321 (0%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P L+++C L +G+ + K + I + N L+D+++KCG + +A+R
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARR 313
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+FD + R + SW TMI+GYA+ G L+ +RKLFD+M +D WNA I G V R ++A
Sbjct: 314 IFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDA 373
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L +F+ MQ ++ ++ T+ L+A + + L +G IH Y+ + L L+ + ++L+D
Sbjct: 374 LALFQEMQT-SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVD 432
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y KCG++ EA +F + ++ +++T +I G S F +++ +G+ P+E T
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 492
Query: 305 FTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
F G+L AC G++ M R +P S +VDL + G + A R+ +
Sbjct: 493 FIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Query: 364 P-RPDLVSWTSLIGGFAQNGQ 383
P D W +L+ G +G
Sbjct: 553 PMEADAAVWGALLFGCRMHGN 573
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 219/456 (48%), Gaps = 44/456 (9%)
Query: 105 ISNRLLDLYAKCGSLADAQRLFDEMGDRDLC----SWNTMIA--GYAKLGWLEQARKLFD 158
+ N LL L KC L +++ +M L + + +IA ++ +L+ + K+
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 159 EMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHE--SSNSNKFTLSSGLAAAAAIPC 216
+ + FSWN I G+ P+E+ +++ M +H S + FT A +
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
LG I G++++ L+L V +A + ++ CG ++ AR +FD+ +D+VSW +I+
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
+ G E+ +++ + GV+P++ T G++ +C+ + GKE + Y+ G
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPD----------- 385
+AL+D++SKCG+ A R+F+ + + +VSWT++I G+A+ G D
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 386 --------------------RALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
AL F+ + S TKPD+IT + LSAC+ G +D G+ +
Sbjct: 352 KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI-W 410
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
H EK+ L ++D+ A+ G +EA ++ + + + + +++GG +HG
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHG 469
Query: 486 NIELAKRAANALFE--IEPENPATYITLANIYANAG 519
+ A N + + I P+ T+I L + + G
Sbjct: 470 DASTAISYFNEMIDAGIAPDE-ITFIGLLSACCHGG 504
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/520 (32%), Positives = 271/520 (52%), Gaps = 44/520 (8%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P ++TL +C + QG ++H+ F +++S ++D+YAK G + A+
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPR-RDHFSWNAAISGYVSHGRPREA 184
FDEM R SW +I+GY + G L+ A KLFD+MP +D +NA + G+V G A
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSA 195
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
+F M H++ + W+ ++
Sbjct: 196 RRLFDEMT-HKTV---------------------------------------ITWTTMIH 215
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS-GVRPNEY 303
Y +D AR +FD M ++++VSW TMI ++ + +EG LF+++ + + P++
Sbjct: 216 GYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDV 275
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
T VL A +D A LG+ H ++ R D +A++D+YSKCG + A R+F+++
Sbjct: 276 TILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM 335
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
P + SW ++I G+A NG AL F ++ KPD+IT + V++AC H GLV++G
Sbjct: 336 PEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGR 394
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
++FH ++E GL +HY C++DLL R+G EAE++I NM +P+ + +S L C
Sbjct: 395 KWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQ 453
Query: 484 HGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
+ +IE A+R E+EP+N Y+ L N+YA +W + V+ M K+ G S
Sbjct: 454 YKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCS 513
Query: 544 WIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGY 583
IEI V F+ GDT+HP R IH LG+L M EE Y
Sbjct: 514 LIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 167/335 (49%), Gaps = 8/335 (2%)
Query: 54 KEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLY 113
+ A D + H S ++ LI+ +R L+ + L + + I N ++D +
Sbjct: 133 RNAFDEMPHRSEVS---WTALISGYIRCGELDLASK---LFDQMPHVKDVVIYNAMMDGF 186
Query: 114 AKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAIS 173
K G + A+RLFDEM + + +W TMI GY + ++ ARKLFD MP R+ SWN I
Sbjct: 187 VKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIG 246
Query: 174 GYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD 233
GY + +P+E + +F+ MQ S + + T+ S L A + L LG+ H ++ R LD
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLD 306
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL 293
V +A+LD+Y KCG +++A+ IFD+M +K V SW MIH +G LF +
Sbjct: 307 KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 294 MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT 353
M +P+E T V+ AC G++ M +G + +VDL + G+
Sbjct: 367 MIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSL 425
Query: 354 KIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRA 387
K A + +P P+ + +S + Q +RA
Sbjct: 426 KEAEDLITNMPFEPNGIILSSFLSACGQYKDIERA 460
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 175/382 (45%), Gaps = 24/382 (6%)
Query: 153 ARKLFDEMPRRD-HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
ARKLFD+ P+RD F N+ I Y+ + ++ ++R ++K + FT ++ +
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWT 271
+ C+ G ++H + R G D V + ++D+Y K G + AR FD+M + VSWT
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 272 TMIHRCFEDGRREEGFSLFRDL-MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR 330
+I G + LF + V G +K+ +A L E+ +
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV- 207
Query: 331 VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHF 390
+ ++ Y + A ++F+ +P +LVSW ++IGG+ QN QP +
Sbjct: 208 -------ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRL 260
Query: 391 F-ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 449
F E+ + PD +T + VL A + G + G E+ H ++ L ++D+
Sbjct: 261 FQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 450 ARSGRFNEAENIIDNMSIKPDKFL--WASLLGGCRIHGNIELAKRAANALF--EIEPENP 505
++ G +A+ I D M P+K + W +++ G ++GN RAA LF + E P
Sbjct: 320 SKCGEIEKAKRIFDEM---PEKQVASWNAMIHGYALNGN----ARAALDLFVTMMIEEKP 372
Query: 506 ATYITLANIYA-NAGQWAEEAK 526
LA I A N G EE +
Sbjct: 373 DEITMLAVITACNHGGLVEEGR 394
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 49/310 (15%)
Query: 227 LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWT-TMIHRCFEDGRREE 285
++R ++ + +++ L + + AR +FDQ +D + +MI E + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 286 GFSLFRDLMG-SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV 344
F+L+RDL + P+ +TFT + K+C+ + G ++H + R G+ + + +V
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 345 DLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
D+Y+K G A F+++P VSWT+LI G+ + G+ D A F DQ+
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF----------DQM 170
Query: 405 TFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDN 464
V + Y ++D +SG A + D
Sbjct: 171 PHVKDVVI-----------------------------YNAMMDGFVKSGDMTSARRLFDE 201
Query: 465 MSIKPDKFLWASLLGG-CRIHGNIELAKRAANALFEIEPE-NPATYITLANIYANAGQWA 522
M+ K W +++ G C I +I+ AA LF+ PE N ++ T+ Y Q
Sbjct: 202 MTHKT-VITWTTMIHGYCNIK-DID----AARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 523 EEAKVRKDME 532
E ++ ++M+
Sbjct: 256 EGIRLFQEMQ 265
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 261/480 (54%), Gaps = 36/480 (7%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D+D +I + L ++ A +F + + + + A I G+VS GR + + ++
Sbjct: 58 DQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHR 117
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M H S + + ++S L A L++ +EIH +++ G V ++++YGK G
Sbjct: 118 M-IHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSG 172
Query: 251 SLDEARGIFDQMVD-------------------------------KDVVSWTTMIHRCFE 279
L A+ +FD+M D KD V WT MI
Sbjct: 173 ELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVR 232
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
+ + LFR++ V NE+T VL AC+D A LG+ VH ++ + +F
Sbjct: 233 NKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFV 292
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
G+AL+++YS+CG+ A RVF + D++S+ ++I G A +G A++ F ++ G
Sbjct: 293 GNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF 352
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
+P+Q+T V +L+AC+H GL+D GLE F+S+K + +HY C++DLL R GR EA
Sbjct: 353 RPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY 412
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAG 519
I+N+ I+PD + +LL C+IHGN+EL ++ A LFE E + TY+ L+N+YA++G
Sbjct: 413 RFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSG 472
Query: 520 QWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMK 579
+W E ++R+ M GI K+PG S IE+ Q+H FLVGD +HP I++ L EL++ ++
Sbjct: 473 KWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 189/370 (51%), Gaps = 4/370 (1%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+ I+ R + V L H + S + +I + ++ L+ R +HA F
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGF 154
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ +++++Y K G L +A+++FDEM DRD + MI Y++ G++++A +LF +
Sbjct: 155 GSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQD 214
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
+ +D W A I G V + +ALE+FR MQ E+ ++N+FT L+A + + L L
Sbjct: 215 VKIKDTVCWTAMIDGLVRNKEMNKALELFREMQM-ENVSANEFTAVCVLSACSDLGALEL 273
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G+ +H ++ ++L V +AL+++Y +CG ++EAR +F M DKDV+S+ TMI
Sbjct: 274 GRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAM 333
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSF 338
G E + FRD++ G RPN+ T +L AC+ +G EV M RV +P
Sbjct: 334 HGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIE 393
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
+VDL + G + A R IP PD + +L+ +G + + L +S
Sbjct: 394 HYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFES 453
Query: 398 GTKPDQITFV 407
PD T+V
Sbjct: 454 -ENPDSGTYV 462
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 294/545 (53%), Gaps = 24/545 (4%)
Query: 52 RLKEAVDLLHHVDRPSPRLYSTLIAACVR----HRALEQGRRVHALTKSSNFIPGIFISN 107
R+ EA+ + +++P +S++++ + ++A+E RR + +S+ P
Sbjct: 111 RMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRR---MVMASDVTPD---RV 164
Query: 108 RLLDLYAKCGSLADAQR-------LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM 160
L+ L + C L++++ + DL N+++ YAK ++A LF +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 161 PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLG 220
+D SW+ I+ YV +G EAL +F M + + N T+ L A AA L G
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
++ H +R GL+ + V +AL+D+Y KC S +EA +F ++ KDVVSW +I +
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 281 G---RREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
G R E FS+ L+ + RP+ VL +C++ K H Y+++ G+D
Sbjct: 344 GMAHRSIEEFSIM--LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
F G++LV+LYS+CG+ AS+VFN I D V WTSLI G+ +G+ +AL F ++KS
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461
Query: 398 G-TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
KP+++TF+ +LSAC+HAGL+ +GL F + + L +HYA ++DLL R G +
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
Query: 457 EAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYA 516
A I M P + +LLG CRIH N E+A+ A LFE+E + Y+ ++N+Y
Sbjct: 522 TAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYG 581
Query: 517 NAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSK 576
G+W K+R ++ RGI K +S IEI+R+VH F+ D HP+ ++ L EL
Sbjct: 582 VKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDL 641
Query: 577 KMKEE 581
MKE+
Sbjct: 642 HMKED 646
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 253/497 (50%), Gaps = 43/497 (8%)
Query: 44 INALCQQKRLKEAVDLLHHV--DRPSPRLYSTLIA--ACVRHRALEQGRRVHALTKSSNF 99
+ +L ++K+ +E + H+ D P ++ +A AC R + G +H K
Sbjct: 32 LKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVT 91
Query: 100 I-PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD 158
+ +++ + L+ +Y KCG + +A R+FDE+ D+ +W++M++G+ K
Sbjct: 92 LGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK------------ 139
Query: 159 EMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
+G P +A+E FR M ++ TL + ++A + R
Sbjct: 140 -------------------NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
LG+ +HG+++R G D + ++LL+ Y K + EA +F + +KDV+SW+T+I
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
++G E +F D+M G PN T VL+ACA G++ H +R G +
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFE-LLLKS 397
+ALVD+Y KC + + A VF++IPR D+VSW +LI GF NG R++ F +LL++
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
T+PD I V VL +C+ G +++ + FHS K+G A +++L +R G
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 458 AENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALF---EIEPENPATYITLANI 514
A + + +++K D +W SL+ G IHG A N + E++P N T++++ +
Sbjct: 420 ASKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP-NEVTFLSILSA 477
Query: 515 YANAGQWAEEAKVRKDM 531
++AG E ++ K M
Sbjct: 478 CSHAGLIHEGLRIFKLM 494
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 5/335 (1%)
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
AR++F EM +R + WN + + E L F M + E N FTL L A
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN-FTLPVALKACG 71
Query: 213 AIPCLRLGKEIHGYLVR-AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWT 271
+ + G+ IHG++ + L D V S+L+ +Y KCG + EA +FD++ D+V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 272 TMIHRCFEDGRREEGFSLFRDL-MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR 330
+M+ ++G + FR + M S V P+ T ++ AC + LG+ VHG+++R
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 331 VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHF 390
G+ ++L++ Y+K K A +F I D++SW+++I + QNG AL
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 391 FELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLA 450
F ++ GT+P+ T + VL AC A +++G + H + + GL ++D+
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTALVDMYM 310
Query: 451 RSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
+ EA + + + D W +L+ G ++G
Sbjct: 311 KCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNG 344
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 144/294 (48%), Gaps = 12/294 (4%)
Query: 248 KCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG 307
K S +AR +F +M + + W T++ + + EE F + +P+ +T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 308 VLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
LKAC + + G+ +HG++ + V + GS+L+ +Y KCG A R+F+++ +P
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
D+V+W+S++ GF +NG P +A+ FF +++ S PD++T + ++SACT G
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG-RC 184
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
H + G + +++ A+S F EA N+ M + D W++++ +G
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF-KMIAEKDVISWSTVIACYVQNG 243
Query: 486 NIELAKRAANALFE--IEPENPATYITLANIYANA-----GQWAEEAKVRKDME 532
A N + + EP N AT + + A A G+ E +RK +E
Sbjct: 244 AAAEALLVFNDMMDDGTEP-NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 296
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 155/382 (40%), Gaps = 75/382 (19%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIA--------------------------- 76
+N + + KEAV+L + +ST+IA
Sbjct: 205 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 264
Query: 77 --------ACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDE 128
AC LEQGR+ H L + +S L+D+Y KC S +A +F
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSR 324
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
+ +D+ SW A ISG+ +G ++E F
Sbjct: 325 IPRKDVVSW-------------------------------VALISGFTLNGMAHRSIEEF 353
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
+M ++ + + L + + + L K H Y+++ G D + + ++L++LY +
Sbjct: 354 SIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSR 413
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTG 307
CGSL A +F+ + KD V WT++I G+ + F ++ S V+PNE TF
Sbjct: 414 CGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLS 473
Query: 308 VLKACADHAAEHLGKEVHGYMM---RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
+L AC+ H G + M+ R+ + +A LVDL + G+ A + ++P
Sbjct: 474 ILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYA--VLVDLLGRVGDLDTAIEITKRMP 531
Query: 365 -RPDLVSWTSLIGG--FAQNGQ 383
P +L+G QNG+
Sbjct: 532 FSPTPQILGTLLGACRIHQNGE 553
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 292/524 (55%), Gaps = 42/524 (8%)
Query: 82 RALEQGRRVHALTKSSNF--IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNT 139
+ +E GR+ H S NF +P I I N L+ +Y++CGS+ + +F M +RD+ SWNT
Sbjct: 332 QQVELGRQFHGFV-SKNFRELP-IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 140 MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS 199
M IS +V +G E L + MQK +
Sbjct: 390 M-------------------------------ISAFVQNGLDDEGLMLVYEMQK-QGFKI 417
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
+ T+++ L+AA+ + +GK+ H +L+R G+ E + S L+D+Y K G + ++ +F
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-EGMNSYLIDMYSKSGLIRISQKLF 476
Query: 260 D--QMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+ ++D +W +MI ++G E+ F +FR ++ +RPN T +L AC+ +
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
LGK++HG+ +R D F SALVD+YSK G K A +F+Q + V++T++I G
Sbjct: 537 VDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG 596
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+ Q+G +RA+ F + +SG KPD ITFV VLSAC+++GL+D+GL+ F ++E + +
Sbjct: 597 YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQP 656
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPD-KFLWASLLGGCRIHGNIELAKRAANA 496
+++HY C+ D+L R GR NEA + + + + LW SLLG C++HG +ELA+ +
Sbjct: 657 SSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSER 716
Query: 497 LFEIEP-ENPATY-ITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVF 554
L + + +N + Y + L+N+YA +W KVR+ M +G+ K+ G+S IEI V+ F
Sbjct: 717 LAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCF 776
Query: 555 LVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQ 598
+ D HP +I++ + L+K M+ + ++ V +E ++
Sbjct: 777 VSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 217/418 (51%), Gaps = 19/418 (4%)
Query: 125 LFDEMGD---RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRP 181
L ++GD +DL ++ I+ YA+LG +E +R++FD R+ WN I YV +
Sbjct: 239 LMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCL 298
Query: 182 REALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSA 241
E++E+F + S++ T +A +A+ + LG++ HG++ + +L V+ ++
Sbjct: 299 VESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNS 358
Query: 242 LLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPN 301
L+ +Y +CGS+ ++ G+F M ++DVVSW TMI ++G +EG L ++ G + +
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKID 418
Query: 302 EYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG--SALVDLYSKCGNTKIASRV 359
T T +L A ++ + +GK+ H +++R G F G S L+D+YSK G +I+ ++
Sbjct: 419 YITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLIDMYSKSGLIRISQKL 475
Query: 360 F--NQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAG 417
F + D +W S+I G+ QNG ++ F +L+ +P+ +T +L AC+ G
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 418 LVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASL 477
VD G + H + L + ++D+ +++G AE++ + + + ++
Sbjct: 536 SVDLGKQ-LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK-ERNSVTYTTM 593
Query: 478 LGGCRIHGNIELAKRAANALFEIEPE----NPATYITLANIYANAGQWAEEAKVRKDM 531
+ G HG + +RA + ++ + T++ + + + +G E K+ ++M
Sbjct: 594 ILGYGQHG---MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 219/505 (43%), Gaps = 88/505 (17%)
Query: 71 YSTLIAACVRHRALEQGRRVHA-----LTKSSNFIPGIFISNRLLDLYAKCGSLAD---- 121
YS+ + AC + L+ G+ VH L SS + N L+++Y C + D
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVV-----HNSLMNMYVSCLNAPDCFEY 164
Query: 122 --AQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHG 179
+++FD M +++ +WNT+I SW YV G
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLI-------------------------SW------YVKTG 193
Query: 180 RPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL--DEV 237
R EA F +M + E S + + A + ++ +G +++ G + D
Sbjct: 194 RNAEACRQFGIMMRMEVKPS-PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLF 252
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
V S+ + +Y + G ++ +R +FD V++++ W TMI ++ E LF + +GS
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK 312
Query: 298 -VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIA 356
+ +E T+ A + LG++ HG++ + + ++L+ +YS+CG+ +
Sbjct: 313 EIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS 372
Query: 357 SRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC--- 413
VF + D+VSW ++I F QNG D L + K G K D IT +LSA
Sbjct: 373 FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNL 432
Query: 414 --------THAGLVDKGLE------YFHSIKEKHGLMHTADH------YA--------CV 445
THA L+ +G++ Y + K GL+ + YA +
Sbjct: 433 RNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSM 492
Query: 446 IDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAAN-ALFEIE 501
I ++G + + M +I+P+ AS+L C G+++L K+ ++ +
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYL 552
Query: 502 PENPATYITLANIYANAG--QWAEE 524
+N L ++Y+ AG ++AE+
Sbjct: 553 DQNVFVASALVDMYSKAGAIKYAED 577
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 149/294 (50%), Gaps = 17/294 (5%)
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHES-SNSNKFTLSSGLAAA 211
AR+LFD +P+ WN I G++ + P EAL + M+K +N + +T SS L A
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGS------LDEARGIFDQMVDK 265
A L+ GK +H +L+R + VV ++L+++Y C + D R +FD M K
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
+VV+W T+I + GR E F +M V+P+ +F V A + + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 326 GYMMRVG--YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ 383
G M+++G Y F S+ + +Y++ G+ + + RVF+ ++ W ++IG + QN
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN-- 295
Query: 384 PDRALHFFELLLKS-GTK---PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH 433
D + EL L++ G+K D++T++ SA + V+ G + FH K+
Sbjct: 296 -DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ-FHGFVSKN 347
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 59 LLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGS 118
+L RP+ ++++ AC + +++ G+++H + +F+++ L+D+Y+K G+
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA 571
Query: 119 LADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISG 174
+ A+ +F + +R+ ++ TMI GY + G E+A LF M + D ++ A +S
Sbjct: 572 IKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Query: 175 YVSHGRPREALEMFRMMQK 193
G E L++F M++
Sbjct: 632 CSYSGLIDEGLKIFEEMRE 650
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 186/581 (32%), Positives = 297/581 (51%), Gaps = 84/581 (14%)
Query: 44 INALCQQKRLKEAVDLL---HHVDRP-SPRLYSTLIAACVRHRALEQGRRVHA-LTKS-- 96
I LC+ +L EA+ +L H + P +P+LY++L+ C + + G + HA + KS
Sbjct: 33 ILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGL 92
Query: 97 -------------------------------------------SNFIPG--------IFI 105
S ++ G +F+
Sbjct: 93 ETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFV 152
Query: 106 SNRLLDLYAKCGSLADAQRLFDEMGDRDL--C----------SWNTMIAGYAKLGWLE-- 151
L A +L+ A + E+G+ L C WN I+ + L +L
Sbjct: 153 EMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFIS--STLAYLYGV 210
Query: 152 -----QARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
AR++FDEMP D W A +S + + EAL +F M + + + T +
Sbjct: 211 NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
L A + L+ GKEIHG L+ G+ + VV S+LLD+YGKCGS+ EAR +F+ M K+
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
VSW+ ++ ++G E+ +FR++ + Y F VLKACA AA LGKE+HG
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHG 386
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
+R G SAL+DLY K G ASRV++++ ++++W +++ AQNG+ +
Sbjct: 387 QYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEE 446
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
A+ FF ++K G KPD I+F+ +L+AC H G+VD+G YF + + +G+ +HY+C+I
Sbjct: 447 AVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMI 506
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE-LAKRAANALFEIEPENP 505
DLL R+G F EAEN+++ + D LW LLG C + + +A+R A + E+EP+
Sbjct: 507 DLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYH 566
Query: 506 ATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
+Y+ L+N+Y G+ + +RK M RG+ K G+SWI+
Sbjct: 567 MSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 194/391 (49%), Gaps = 29/391 (7%)
Query: 163 RDHFSWNAAI--SGYVSHGRPREA---LEMFRMMQKHE------SSNSNKFTLSSGLAAA 211
+ HFS +A++ + +S P + LE+ ++ Q E S++S++ + L A+
Sbjct: 7 KRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYAS 66
Query: 212 AAIPCLRL-----GKEIHGYLVRAGLDLDEVVWSALLDLYGKCG-SLDEARGIFDQMVDK 265
C ++ G + H ++V++GL+ D V ++LL LY K G + E R +FD K
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
D +SWT+M+ + +F +++ G+ NE+T + +KAC++ LG+ H
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPD 385
G ++ G++ F S L LY A RVF+++P PD++ WT+++ F++N +
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 246
Query: 386 RALHFFELLLKS-GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC 444
AL F + + G PD TF VL+AC + + +G E H +G+ +
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE-IHGKLITNGIGSNVVVESS 305
Query: 445 VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPEN 504
++D+ + G EA + + MS K + W++LLGG +G E +A E+E ++
Sbjct: 306 LLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHE---KAIEIFREMEEKD 361
Query: 505 PATYITLANIYANAGQWAEEAKVRKDMEIRG 535
+ T+ + A AG A VR EI G
Sbjct: 362 LYCFGTV--LKACAGL----AAVRLGKEIHG 386
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 103/248 (41%), Gaps = 40/248 (16%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALT 94
K + ++ + CQ ++A+++ ++ + T++ AC A+ G+ +H
Sbjct: 329 KNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQY 388
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQAR 154
+ + + L+DLY K G + A R++ +M R++ +WN M++ A+ G E+A
Sbjct: 389 VRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAV 448
Query: 155 KLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
F++M ++ D+ S+ A ++ G E F +M K
Sbjct: 449 SFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK----------------- 491
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVS 269
Y ++ G + +S ++DL G+ G +EA + ++ D
Sbjct: 492 --------------SYGIKPGTEH----YSCMIDLLGRAGLFEEAENLLERAECRNDASL 533
Query: 270 WTTMIHRC 277
W ++ C
Sbjct: 534 WGVLLGPC 541
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 253/482 (52%), Gaps = 41/482 (8%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP + ++ C + + G VH L F + + +D Y KC L A++
Sbjct: 107 RPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARK 166
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+F EM +R+ SW ++ Y K G LE+A+ +FD MP R+ SWNA + G V G A
Sbjct: 167 VFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNA 226
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
++F M K D + +++++D
Sbjct: 227 KKLFDEMPKR----------------------------------------DIISYTSMID 246
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
Y K G + AR +F++ DV +W+ +I ++G+ E F +F ++ V+P+E+
Sbjct: 247 GYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFI 306
Query: 305 FTGVLKACADHAAEHLGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
G++ AC+ L ++V Y+ R+ + AL+D+ +KCG+ A+++F ++
Sbjct: 307 MVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEM 366
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
P+ DLVS+ S++ G A +G A+ FE ++ G PD++ F +L C + LV++GL
Sbjct: 367 PQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGL 426
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
YF +++K+ ++ + DHY+C+++LL+R+G+ EA +I +M + W SLLGGC +
Sbjct: 427 RYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSL 486
Query: 484 HGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
HGN E+A+ A LFE+EP++ +Y+ L+NIYA +W + A +R M GI K G+S
Sbjct: 487 HGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
Query: 544 WI 545
WI
Sbjct: 547 WI 548
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 163/335 (48%), Gaps = 19/335 (5%)
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
+F+ +P + WN I GY + E + + M + + +++T + +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
+R+G +HG ++R G D D VV ++ +D YGKC L AR +F +M +++ VSWT ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
+ G EE S+F + + G++K+ A+ L E+ D
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMP------KRDI 238
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
S+ ++++D Y+K G+ A +F + D+ +W++LI G+AQNGQP+ A F +
Sbjct: 239 ISY--TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 396 KSGTKPDQITFVGVLSACTHAG---LVDKGLEYFHSIKEKHGLMHTADHYAC--VIDLLA 450
KPD+ VG++SAC+ G L +K Y H K + HY +ID+ A
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF-----SSHYVVPALIDMNA 351
Query: 451 RSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
+ G + A + + M + D + S++ G IHG
Sbjct: 352 KCGHMDRAAKLFEEMP-QRDLVSYCSMMEGMAIHG 385
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 184/399 (46%), Gaps = 55/399 (13%)
Query: 222 EIHGYLVRAGLDLDE-VVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
+IH ++R GL+ D+ ++ + SL + +F+++ W +I
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 281 GRREEGFSLFRDLMGSGV-RPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
E S+ +M +G+ RP+EYTF V+K C+++ +G VHG ++R+G+D
Sbjct: 88 FLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVV 147
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL------ 393
G++ VD Y KC + A +VF ++P + VSWT+L+ + ++G+ + A F+L
Sbjct: 148 GTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNL 207
Query: 394 ---------LLKSG------------TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
L+KSG K D I++ ++ G + + F +E
Sbjct: 208 GSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLF---EEA 264
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIEL 489
G+ A ++ +I A++G+ NEA + M ++KPD+F+ L+ C G EL
Sbjct: 265 RGVDVRA--WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFEL 322
Query: 490 AKRAANALFEIEPENPATYITLANIYANA--GQWAEEAKVRKDMEIRGIVKKPGKSWIEI 547
++ + L + + + Y+ A I NA G AK+ ++M R +V S+ +
Sbjct: 323 CEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLV-----SYCSM 377
Query: 548 KRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPD 586
+ + G + IR L +KM +EG VPD
Sbjct: 378 MEGMAIHGCGSEA---IR--------LFEKMVDEGIVPD 405
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 254/500 (50%), Gaps = 43/500 (8%)
Query: 53 LKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDL 112
+ E+VDL H +++ C + LE GR VH L + I + N L+++
Sbjct: 210 VNESVDLDHAT-------IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 113 YAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAI 172
Y KCG + ++AR +FD M RRD +W I
Sbjct: 263 YLKCGRM-------------------------------DEARFVFDRMERRDVITWTCMI 291
Query: 173 SGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL 232
+GY G ALE+ R+MQ E N T++S ++ + GK +HG+ VR +
Sbjct: 292 NGYTEDGDVENALELCRLMQ-FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV 350
Query: 233 DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
D ++ ++L+ +Y KC +D +F W+ +I C ++ + LF+
Sbjct: 351 YSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
+ V PN T +L A A A +H Y+ + G+ A + LV +YSKCG
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 353 TKIASRVFNQIPRP----DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVG 408
+ A ++FN I D+V W +LI G+ +G AL F +++SG P++ITF
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTS 530
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK 468
L+AC+H+GLV++GL F + E + + ++HY C++DLL R+GR +EA N+I + +
Sbjct: 531 ALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFE 590
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVR 528
P +W +LL C H N++L + AAN LFE+EPEN Y+ LANIYA G+W + KVR
Sbjct: 591 PTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVR 650
Query: 529 KDMEIRGIVKKPGKSWIEIK 548
ME G+ KKPG S IEI+
Sbjct: 651 SMMENVGLRKKPGHSTIEIR 670
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 177/359 (49%), Gaps = 7/359 (1%)
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMM 191
RD N ++A Y G +E AR +FD M RD SWN ISGY +G +AL MF M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 192 QKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGS 251
+ES + + T+ S L + L +G+ +H + L V +AL+++Y KCG
Sbjct: 210 V-NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 252 LDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA 311
+DEAR +FD+M +DV++WT MI+ EDG E L R + GVRPN T ++
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSV 328
Query: 312 CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSW 371
C D + GK +HG+ +R ++L+ +Y+KC + RVF+ + W
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 372 TSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD-KGLEYFHSIK 430
+++I G QN AL F+ + + +P+ T +L A +A L D + H
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYL 446
Query: 431 EKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK---PDKFLWASLLGGCRIHGN 486
K G M + D ++ + ++ G A I + + K D LW +L+ G +HG+
Sbjct: 447 TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 193/409 (47%), Gaps = 16/409 (3%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF-RMMQKHES 196
+T+ YA G + ARKLF+EMP+ S+N I YV G +A+ +F RM+ +
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 197 SNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
+ +T AA + ++LG +HG ++R+ D+ V +ALL +Y G ++ AR
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+FD M ++DV+SW TMI + +G + +F ++ V + T +L C
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
+G+ VH + +ALV++Y KCG A VF+++ R D+++WT +I
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G+ ++G + AL L+ G +P+ +T ++S C A V+ G + H + +
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG-KCLHGWAVRQQVY 351
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC----RIHGNIELAKR 492
+I + A+ R + + S K W++++ GC + + L KR
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 493 AANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPG 541
++EP N AT +L YA A +R+ M I + K G
Sbjct: 411 MRRE--DVEP-NIATLNSLLPAYAAL------ADLRQAMNIHCYLTKTG 450
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 166/359 (46%), Gaps = 15/359 (4%)
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
M ++++ ++ S+ S L AA + K +H +++ G + + S L Y
Sbjct: 1 MSEVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTY 59
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVR--PNEYT 304
CG + AR +F++M ++S+ +I +G + S+F ++ GV+ P+ YT
Sbjct: 60 ALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYT 119
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
+ V KA + + LG VHG ++R + + +AL+ +Y G ++A VF+ +
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
D++SW ++I G+ +NG + AL F+ ++ D T V +L C H ++ G
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG-R 238
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
H + E+ L + ++++ + GR +EA + D M + D W ++ G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTED 297
Query: 485 GNIELAKRAANAL-FEIEPENPATYITLANIYANAGQ---------WAEEAKVRKDMEI 533
G++E A + FE N T +L ++ +A + WA +V D+ I
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 251/485 (51%), Gaps = 31/485 (6%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D D+ N MI Y K +E ARK+FDEM RD SWN+ ISGY G + +M++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M N T+ S A L G E+H ++ + +D + +A++ Y KCG
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 251 SLDEARGIFDQMVDKDVVS-------------------------------WTTMIHRCFE 279
SLD AR +FD+M +KD V+ W MI +
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQ 343
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
+ EE + FR+++ G RPN T + +L + + GKE+H + +R G D +
Sbjct: 344 NNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYV 403
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
++++D Y+K G A RVF+ L++WT++I +A +G D A F+ + GT
Sbjct: 404 TTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT 463
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
KPD +T VLSA H+G D F S+ K+ + +HYAC++ +L+R+G+ ++A
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAG 519
I M I P +W +LL G + G++E+A+ A + LFE+EPEN Y +AN+Y AG
Sbjct: 524 EFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAG 583
Query: 520 QWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMK 579
+W E VR M+ G+ K PG SWIE ++ + F+ D+S + ++++E + L + M
Sbjct: 584 RWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMS 643
Query: 580 EEGYV 584
++ Y+
Sbjct: 644 DKEYI 648
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 3/315 (0%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P+ ++ AC + L G VH ++ + + N ++ YAKCGSL A+
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
LFDEM ++D ++ +I+GY G +++A LF EM +WNA ISG + + E
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
+ FR M + S N TLSS L + L+ GKEIH + +R G D + V ++++D
Sbjct: 351 INSFREMIRC-GSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
Y K G L A+ +FD D+ +++WT +I G + SLF + G +P++ T
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVT 469
Query: 305 FTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
T VL A A + + + M+ + +PG + +V + S+ G A +++
Sbjct: 470 LTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
Query: 364 P-RPDLVSWTSLIGG 377
P P W +L+ G
Sbjct: 530 PIDPIAKVWGALLNG 544
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 197/454 (43%), Gaps = 61/454 (13%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y LI RHR ++HA + P F++++L+ Y + A +FDE+
Sbjct: 25 YGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEIT 84
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
R+ S+N ++ Y A LF +S +AA +S +AL
Sbjct: 85 VRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKAL----- 139
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
S + F L S L +++HG+++R G D D V + ++ Y KC
Sbjct: 140 ------SGCDDFWLGS------------LARQVHGFVIRGGFDSDVFVGNGMITYYTKCD 181
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG-SGVRPNEYTFTGVL 309
+++ AR +FD+M ++DVVSW +MI + G E+ +++ ++ S +PN T V
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPD-- 367
+AC + G EVH M+ +A++ Y+KCG+ A +F+++ D
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 368 -----------------------------LVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
L +W ++I G QN + ++ F +++ G
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
++P+ +T +L + T++ + G E H+ ++G + +ID A+ G A
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKE-IHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGA 420
Query: 459 ENIIDNMSIKPDKFL--WASLLGGCRIHGNIELA 490
+ + DN D+ L W +++ +HG+ + A
Sbjct: 421 QRVFDNC---KDRSLIAWTAIITAYAVHGDSDSA 451
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 19/299 (6%)
Query: 222 EIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDG 281
++H +V + D + S L+ Y + +A +FD++ ++ S+ ++
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 282 RREEGFSLFRDLMGS------GVRPNEYTFTGVLKA---CADHAAEHLGKEVHGYMMRVG 332
+ FSLF +GS RP+ + + VLKA C D L ++VHG+++R G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFE 392
+D F G+ ++ Y+KC N + A +VF+++ D+VSW S+I G++Q+G + ++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 393 LLLK-SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC--VIDLL 449
+L S KP+ +T + V AC + + GLE + E H M D C VI
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQM---DLSLCNAVIGFY 279
Query: 450 ARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATY 508
A+ G + A + D MS K D + +++ G HG L K A E+E +T+
Sbjct: 280 AKCGSLDYARALFDEMSEK-DSVTYGAIISGYMAHG---LVKEAMALFSEMESIGLSTW 334
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 296 bits (757), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 161/518 (31%), Positives = 275/518 (53%), Gaps = 5/518 (0%)
Query: 69 RLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDE 128
+++ ++AA + + + + +P F + ++ + G + + E
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 129 MGDRDLCSWNT----MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+ R + S +T ++ Y+K G A +F M +D +W + ISG +G+ +EA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 185 LEMFRMMQKHESS-NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
L++F M+ + S + ++S A A + LR G ++HG +++ GL L+ V S+L+
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
DLY KCG + A +F M +++V+W +MI + E LF ++ G+ P+
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSV 578
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
+ T VL A + A+ GK +HGY +R+G + +AL+D+Y KCG +K A +F ++
Sbjct: 579 SITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
L++W +I G+ +G AL F+ + K+G PD +TF+ ++SAC H+G V++G
Sbjct: 639 QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGK 698
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
F +K+ +G+ +HYA ++DLL R+G EA + I M I+ D +W LL R
Sbjct: 699 NIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRT 758
Query: 484 HGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
H N+EL +A L +EPE +TY+ L N+Y AG E AK+ M+ +G+ K+PG S
Sbjct: 759 HHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818
Query: 544 WIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEE 581
WIE+ + +VF G +S P +I L L M +E
Sbjct: 819 WIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 138/525 (26%), Positives = 227/525 (43%), Gaps = 77/525 (14%)
Query: 54 KEAVDLLHHVDRPSPRLYST----LIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRL 109
+ ++DL S +L ST + AC + GR++H ++ L
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 110 LDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWN 169
L +Y+KCG + +A+ +F + D+ L WN M+A YA+ D+
Sbjct: 314 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE----------------NDY---- 353
Query: 170 AAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR 229
GY AL++F M + +S + FTLS+ ++ + + GK +H L +
Sbjct: 354 ----GY-------SALDLFGFM-RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 230 AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSL 289
+ + SALL LY KCG +A +F M +KD+V+W ++I ++G+ +E +
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 290 FRDLM--GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLY 347
F D+ ++P+ T V ACA A G +VHG M++ G F GS+L+DLY
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 348 SKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFV 407
SKCG ++A +VF + ++V+W S+I +++N P+ ++ F L+L G PD ++
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
VL A + + KG + H + G+ +ID+ + G AENI M
Sbjct: 582 SVLVAISSTASLLKG-KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH 640
Query: 468 K----------------------------------PDKFLWASLLGGCRIHGNIELAKRA 493
K PD + SL+ C G +E K
Sbjct: 641 KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNI 700
Query: 494 ANAL---FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
+ + IEP N Y + ++ AG E K M I
Sbjct: 701 FEFMKQDYGIEP-NMEHYANMVDLLGRAGLLEEAYSFIKAMPIEA 744
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 202/472 (42%), Gaps = 53/472 (11%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDRPSPR-----LYSTLIAACVRHRALEQGRRVHAL 93
+ I AL Q+ +A+ L D SP + +L+ AC L G+ +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFD-------EMGDRDLCSWNTMIAGYAK 146
+ FI+ L+++Y KCG L A ++FD + RD+ WN+MI GY K
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 147 LGWLEQARKLFDEM----PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKF 202
++ F M R D FS + +S G R
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR------------------- 186
Query: 203 TLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM 262
GK+IHG+++R LD D + +AL+D+Y K G +A +F ++
Sbjct: 187 ---------------EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEI 231
Query: 263 VDK-DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
DK +VV W MI G E L+ + V+ +FTG L AC+ G
Sbjct: 232 EDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFG 291
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQN 381
+++H ++++G + ++L+ +YSKCG A VF+ + L W +++ +A+N
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 382 GQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADH 441
AL F + + PD T V+S C+ GL + G + H+ K + T+
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG-KSVHAELFKRPIQSTSTI 410
Query: 442 YACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRA 493
+ ++ L ++ G +A + +M K D W SL+ G +G + A +
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCKNGKFKEALKV 461
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 208/486 (42%), Gaps = 45/486 (9%)
Query: 44 INALCQQKRLKEAVD----LLHHVDRPSPRLYSTLIAACVRHRAL--EQGRRVHALTKSS 97
I+ + +R KE V +L RP S +++ + E+G+++H +
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
Query: 98 NFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
+ F+ L+D+Y K G DA R+F E+ D+ N ++
Sbjct: 200 SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS----NVVL---------------- 239
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
WN I G+ G +L+++ M+ K+ S + + L A +
Sbjct: 240 ----------WNVMIVGFGGSGICESSLDLY-MLAKNNSVKLVSTSFTGALGACSQSENS 288
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
G++IH +V+ GL D V ++LL +Y KCG + EA +F +VDK + W M+
Sbjct: 289 GFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAY 348
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
E+ LF + V P+ +T + V+ C+ + GK VH + + S
Sbjct: 349 AENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS 408
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL-- 395
SAL+ LYSKCG A VF + D+V+W SLI G +NG+ AL F +
Sbjct: 409 TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD 468
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
KPD V +AC + GL+ H K GL+ + +IDL ++ G
Sbjct: 469 DDSLKPDSDIMTSVTNACAGLEALRFGLQ-VHGSMIKTGLVLNVFVGSSLIDLYSKCGLP 527
Query: 456 NEAENIIDNMSIKPDKFLWASLLGGCRIHGNI-ELAKRAANALFE--IEPENPATYITLA 512
A + +MS + + W S++ C N+ EL+ N + I P++ + L
Sbjct: 528 EMALKVFTSMSTE-NMVAWNSMI-SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLV 585
Query: 513 NIYANA 518
I + A
Sbjct: 586 AISSTA 591
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 195/418 (46%), Gaps = 50/418 (11%)
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSN---SNKFTLSSGLAAAAAIPCLRLGKEI 223
S N+ I + G +AL ++ KH+ S+ ++ FT S L A +A+ L GK I
Sbjct: 26 SINSGIRALIQKGEYLQALHLY---SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTI 82
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFD-------QMVDKDVVSWTTMIHR 276
HG +V G D + ++L+++Y KCG LD A +FD + +DV W +MI
Sbjct: 83 HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA--EHLGKEVHGYMMRVGYD 334
F+ R +EG FR ++ GVRP+ ++ + V+ GK++HG+M+R D
Sbjct: 143 YFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD 202
Query: 335 PGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFEL 393
SF +AL+D+Y K G + A RVF +I + ++V W +I GF +G + +L + L
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 394 LLKSGTKPDQITFVGVLSACT-----------HAGLVDKGL-------EYFHSIKEKHGL 435
+ K +F G L AC+ H +V GL S+ K G+
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 436 MHTADH-YACVID--------LLARSGRFNEAENIID------NMSIKPDKFLWASLLGG 480
+ A+ ++CV+D ++A + + +D S+ PD F ++++
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382
Query: 481 CRIHGNIELAKRAANALFEIEPENPATYIT-LANIYANAGQWAEEAKVRKDMEIRGIV 537
C + G K LF+ ++ +T + L +Y+ G + V K ME + +V
Sbjct: 383 CSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMV 440
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 181/398 (45%), Gaps = 43/398 (10%)
Query: 44 INALCQQKRLKEAVDLLHHVD------RPSPRLYSTLIAACVRHRALEQGRRVHALTKSS 97
I+ LC+ + KEA+ + + +P + +++ AC AL G +VH +
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 98 NFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
+ +F+ + L+DLY+KCG A ++F M ++ +WN+MI+ Y++
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSR----------- 554
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
+ P ++++F +M + + +++S L A ++ L
Sbjct: 555 --------------------NNLPELSIDLFNLMLS-QGIFPDSVSITSVLVAISSTASL 593
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
GK +HGY +R G+ D + +AL+D+Y KCG A IF +M K +++W MI+
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGY 653
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR-VGYDPG 336
G SLF ++ +G P++ TF ++ AC GK + +M + G +P
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+ +VDL + G + A +P D W L+ + + + E LL
Sbjct: 714 MEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL 773
Query: 396 KSGTKPDQ-ITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
+ +P++ T+V +++ AGL ++ + +KEK
Sbjct: 774 R--MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 254/484 (52%), Gaps = 38/484 (7%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + + AC + + +G+++H + F I++ N L+ Y CG
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGE------- 156
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
R+ C K+F EMP RD SW I+G+ G +EAL
Sbjct: 157 -----SRNAC-------------------KVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+ F M N T L ++ + CL LGK IHG +++ + +AL+D+
Sbjct: 193 DTFSKMD----VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM-GSGVRPNEYT 304
Y KC L +A +F ++ KD VSW +MI R +E LF + SG++P+ +
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
T VL ACA A G+ VH Y++ G + G+A+VD+Y+KCG + A +FN I
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
++ +W +L+GG A +G +L +FE ++K G KP+ +TF+ L+AC H GLVD+G
Sbjct: 369 SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 425 YFHSIKEK-HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
YFH +K + + L +HY C+IDLL R+G +EA ++ M +KPD + ++L C+
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKN 488
Query: 484 HGNI-ELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGK 542
G + EL K ++ +IE E+ Y+ L+NI+A +W + A++R+ M+++GI K PG
Sbjct: 489 RGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGS 548
Query: 543 SWIE 546
S+IE
Sbjct: 549 SYIE 552
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 176/392 (44%), Gaps = 27/392 (6%)
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMI-------------AGYAKLGWLEQARK 155
LL+L ++C SL +++ ++ RDL + +I A Y+ + L R
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSV-ILHSIRS 67
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
+ FS+N +S Y +PR + ++ + S + FT A
Sbjct: 68 VLSS------FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS-PDMFTFPPVFKACGKFS 120
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
+R GK+IHG + + G D V ++L+ YG CG A +F +M +DVVSWT +I
Sbjct: 121 GIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIIT 180
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
G +E F + V PN T+ VL + LGK +HG +++
Sbjct: 181 GFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI 237
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELL- 394
G+AL+D+Y KC A RVF ++ + D VSW S+I G + A+ F L+
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQ 297
Query: 395 LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 454
SG KPD VLSAC G VD G + H G+ ++D+ A+ G
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDHG-RWVHEYILTAGIKWDTHIGTAIVDMYAKCGY 356
Query: 455 FNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
A I + + K + F W +LLGG IHG+
Sbjct: 357 IETALEIFNGIRSK-NVFTWNALLGGLAIHGH 387
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVD-----RPSPRLYSTLIAACVRHRALEQGRR 89
K ++ I+ L +R KEA+DL + +P + +++++AC A++ GR
Sbjct: 268 KDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRW 327
Query: 90 VHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGW 149
VH ++ I ++D+YAKCG + A +F+ + +++ +WN ++ G A G
Sbjct: 328 VHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGH 387
Query: 150 LEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHE 195
++ + F+EM + + ++ AA++ G E F M+ E
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSRE 437
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 281/538 (52%), Gaps = 78/538 (14%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
++ +++L K + A L H++ P+P+ G+++HA + F
Sbjct: 24 LKQNVSSLSPAKYIAGA--LQEHINSPAPK----------------AGKKIHADIIKTGF 65
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
P + IS +LL L+ KCG L+ A+++FDE+ L ++N MI+GY K G +++ L
Sbjct: 66 QPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQR 125
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M +S A GY M+ K +S + L L
Sbjct: 126 M----SYSGEKA-DGYT-----------LSMVLKASNSRGSTMILPRSLC---------- 159
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
+ +H +++ ++LD+V+ +AL+D Y K G L+ AR +F+ M D++VV T+MI
Sbjct: 160 -RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMN 218
Query: 280 DGRRE---------------------EGFS-----------LFRDLMGSGVRPNEYTFTG 307
G E EGFS ++ + +G PN TF
Sbjct: 219 QGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFAS 278
Query: 308 VLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPD 367
V+ AC+ + +G++VH +M+ G GS+L+D+Y+KCG A RVF+Q+ +
Sbjct: 279 VIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKN 338
Query: 368 LVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFH 427
+ SWTS+I G+ +NG P+ AL F + + +P+ +TF+G LSAC+H+GLVDKG E F
Sbjct: 339 VFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFE 398
Query: 428 SIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNI 487
S++ + + +HYAC++DL+ R+G N+A M +PD +WA+LL C +HGN+
Sbjct: 399 SMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNV 458
Query: 488 ELAKRAANALFEIEPEN-PATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
ELA AA+ LF++ + P Y+ L+N+YA+ +W +K+R+ M+ R I K G+SW
Sbjct: 459 ELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 159/368 (43%), Gaps = 43/368 (11%)
Query: 181 PREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWS 240
P F + Q S + K+ ++ L P + GK+IH +++ G D +
Sbjct: 15 PSNHYSTFPLKQNVSSLSPAKY-IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISI 73
Query: 241 ALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRP 300
LL L+ KCG L AR +FD++ + ++ MI + G +E L + + SG +
Sbjct: 74 KLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKA 133
Query: 301 NEYTFTGVLKACADHAA-----EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN--- 352
+ YT + VLKA + L + VH +++ + +ALVD Y K G
Sbjct: 134 DGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLES 193
Query: 353 ----------------------------TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ- 383
+ A +FN D+V + +++ GF+++G+
Sbjct: 194 ARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGET 253
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
R++ + + ++G P+ TF V+ AC+ + G + H+ K G+ +
Sbjct: 254 AKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG-QQVHAQIMKSGVYTHIKMGS 312
Query: 444 CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL--FEIE 501
++D+ A+ G N+A + D M K + F W S++ G +GN E A + F IE
Sbjct: 313 SLLDMYAKCGGINDARRVFDQMQEK-NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Query: 502 PENPATYI 509
P N T++
Sbjct: 372 P-NYVTFL 378
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 283/545 (51%), Gaps = 43/545 (7%)
Query: 44 INALCQQKRLKEAVDLL-------HHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKS 96
I Q KEA++ H D S +++IAA R L G +HA
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVS---MTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
+ + + N L+D+Y+KC R F M D+
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK------------------------ 450
Query: 157 FDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
D SW I+GY + EALE+FR + K + ++ L S L A++ +
Sbjct: 451 -------DLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKS 502
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
+ + KEIH +++R GL LD V+ + L+D+YGKC ++ A +F+ + KDVVSWT+MI
Sbjct: 503 MLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
+G E LFR ++ +G+ + +L A A +A + G+E+H Y++R G+
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 621
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
A+VD+Y+ CG+ + A VF++I R L+ +TS+I + +G A+ F+ +
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 681
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
PD I+F+ +L AC+HAGL+D+G + ++ ++ L +HY C++D+L R+
Sbjct: 682 ENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVV 741
Query: 457 EAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYA 516
EA + M +P +W +LL CR H E+ + AA L E+EP+NP + ++N++A
Sbjct: 742 EAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFA 801
Query: 517 NAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSK 576
G+W + KVR M+ G+ K PG SWIE+ +VH F D SHP+ ++I+E L E+++
Sbjct: 802 EQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTR 861
Query: 577 KMKEE 581
K++ E
Sbjct: 862 KLERE 866
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 190/391 (48%), Gaps = 37/391 (9%)
Query: 48 CQQKRLKEAVDLLHHVDRPSP-RLYSTLIAACVRHRALEQGRRVHA-LTKSSNFIPGIFI 105
C L EA L + SP ++ ++ C + RA+ QGR++H+ + K+ F+
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFL 118
Query: 106 SNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDH 165
+ +L+ +Y KCGSL DA+++FDEM DR +WNTMI
Sbjct: 119 AGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIG----------------------- 155
Query: 166 FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHG 225
YVS+G P AL ++ M + E + + L A A + +R G E+H
Sbjct: 156 --------AYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHS 206
Query: 226 YLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK-DVVSWTTMIHRCFEDGRRE 284
LV+ G + +AL+ +Y K L AR +FD +K D V W +++ G+
Sbjct: 207 LLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL 266
Query: 285 EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG-YDPGSFAGSAL 343
E LFR++ +G PN YT L AC + LGKE+H +++ + + +AL
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 326
Query: 344 VDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQ 403
+ +Y++CG A R+ Q+ D+V+W SLI G+ QN AL FF ++ +G K D+
Sbjct: 327 IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDE 386
Query: 404 ITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
++ +++A + G+E H+ KHG
Sbjct: 387 VSMTSIIAASGRLSNLLAGME-LHAYVIKHG 416
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 203/430 (47%), Gaps = 45/430 (10%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+ L+ AC + R + G +H+L + FI N L+ +YAK L+
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS---------- 234
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR-DHFSWNAAISGYVSHGRPREALEMFR 189
AR+LFD + D WN+ +S Y + G+ E LE+FR
Sbjct: 235 ---------------------AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFR 273
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV-VWSALLDLYGK 248
M + N +T+ S L A +LGKEIH ++++ E+ V +AL+ +Y +
Sbjct: 274 EMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
CG + +A I QM + DVV+W ++I ++ +E F D++ +G + +E + T +
Sbjct: 333 CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
+ A + G E+H Y+++ G+D G+ L+D+YSKC T R F ++ DL
Sbjct: 393 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 452
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVL--SACTHAGLVDKGLEYF 426
+SWT++I G+AQN AL F + K + D++ +L S+ + L+ K +
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI--- 509
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
H + GL+ T ++D+ + A + +++ K D W S++ ++GN
Sbjct: 510 HCHILRKGLLDTVIQNE-LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGN 567
Query: 487 ----IELAKR 492
+EL +R
Sbjct: 568 ESEAVELFRR 577
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 9/266 (3%)
Query: 220 GKEIHGYLVRA--GLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
G+++H + + +LD + L+ +YGKCGSLD+A +FD+M D+ +W TMI
Sbjct: 99 GRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
+G +L+ ++ GV +F +LKACA G E+H ++++GY
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG 217
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQI-PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
F +ALV +Y+K + A R+F+ + D V W S++ ++ +G+ L F +
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC--VIDLLARSGR 454
+G P+ T V L+AC G E S+ + H+++ Y C +I + R G+
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSSELYVCNALIAMYTRCGK 335
Query: 455 FNEAENIIDNMSIKPDKFLWASLLGG 480
+AE I+ M+ D W SL+ G
Sbjct: 336 MPQAERILRQMN-NADVVTWNSLIKG 360
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 262/490 (53%), Gaps = 41/490 (8%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + ++ AC R ++ G VH + F +++S LL +Y CG + R+
Sbjct: 105 PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRV 164
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F+ D+ WN + +W + ISG+V++ R +A+
Sbjct: 165 FE-----DIPQWNVV--------------------------AWGSLISGFVNNNRFSDAI 193
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD--------LDEV 237
E FR MQ + +N+ + L A + GK HG+L G D + +
Sbjct: 194 EAFREMQSN-GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVI 252
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
+ ++L+D+Y KCG L AR +FD M ++ +VSW ++I ++G EE +F D++ G
Sbjct: 253 LATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLG 312
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIAS 357
+ P++ TF V++A LG+ +H Y+ + G+ + ALV++Y+K G+ + A
Sbjct: 313 IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAK 372
Query: 358 RVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT-KPDQITFVGVLSACTHA 416
+ F + + D ++WT +I G A +G + AL F+ + + G PD IT++GVL AC+H
Sbjct: 373 KAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHI 432
Query: 417 GLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWAS 476
GLV++G YF +++ HGL T +HY C++D+L+R+GRF EAE ++ M +KP+ +W +
Sbjct: 433 GLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGA 492
Query: 477 LLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
LL GC IH N+EL R + + E E Y+ L+NIYA AG+WA+ +R+ M+ + +
Sbjct: 493 LLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRV 552
Query: 537 VKKPGKSWIE 546
K G S +E
Sbjct: 553 DKVLGHSSVE 562
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 206/454 (45%), Gaps = 39/454 (8%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y +++ R+L + ++H L S+ I + +RL+D C +
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMN--------- 56
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
L AR +F+ + + WN+ I GY + P +AL ++
Sbjct: 57 -------------------LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQE 97
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M + S + FT L A + + ++ G +HG++V+ G +++ V + LL +Y CG
Sbjct: 98 MLRKGYS-PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
++ +F+ + +VV+W ++I + R + FR++ +GV+ NE +L
Sbjct: 157 EVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLV 216
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDP--------GSFAGSALVDLYSKCGNTKIASRVFNQ 362
AC GK HG++ +G+DP ++L+D+Y+KCG+ + A +F+
Sbjct: 217 ACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 363 IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
+P LVSW S+I G++QNG + AL F +L G PD++TF+ V+ A G G
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
Query: 423 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCR 482
+ H+ K G + A ++++ A++G A+ +++ K D W ++ G
Sbjct: 337 -QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLA 394
Query: 483 IHGNIELAKRAANALFEIEPENPATYITLANIYA 516
HG+ A + E P L +YA
Sbjct: 395 SHGHGNEALSIFQRMQEKGNATPDGITYLGVLYA 428
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 52/352 (14%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKS 96
NN F +AI A + + + VD L+ AC R + + G+ H +
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVD---------LLVACGRCKDIVTGKWFHGFLQG 236
Query: 97 SNFIP--------GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLG 148
F P + ++ L+D+YAKCG L A+ LFD M +R L SWN++I GY++ G
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 149 WLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGL 208
E+A +F L+M + +K T S +
Sbjct: 297 DAEEALCMF---------------------------LDMLDL-----GIAPDKVTFLSVI 324
Query: 209 AAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV 268
A+ C +LG+ IH Y+ + G D + AL+++Y K G + A+ F+ + KD +
Sbjct: 325 RASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTI 384
Query: 269 SWTTMIHRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
+WT +I G E S+F+ + G P+ T+ GVL AC+ G+
Sbjct: 385 AWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAE 444
Query: 328 MMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
M + G +P +VD+ S+ G + A R+ +P +P++ W +L+ G
Sbjct: 445 MRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 292/560 (52%), Gaps = 6/560 (1%)
Query: 48 CQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHR-ALEQGRRVHALTKSSNFIPGIFIS 106
C + ++ +++L P + L+ R AL G+++H +++
Sbjct: 114 CDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQ 173
Query: 107 NRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHF 166
N L+ +Y+ CG + A+ +FD D+ SWN MI+GY ++ E++ +L EM R
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKH--ESSNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
+ + +S + ++ + + ++ E L + L A A C + +I
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYA-ACGEM--DIA 290
Query: 225 GYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRRE 284
+ R+ D + W++++ Y + G+L AR FDQM +D +SWT MI G
Sbjct: 291 VRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFN 350
Query: 285 EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV 344
E +FR++ +G+ P+E+T VL ACA + +G+ + Y+ + G+AL+
Sbjct: 351 ESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALI 410
Query: 345 DLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
D+Y KCG ++ A +VF+ + + D +WT+++ G A NGQ A+ F + +PD I
Sbjct: 411 DMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI 470
Query: 405 TFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDN 464
T++GVLSAC H+G+VD+ ++F ++ H + + HY C++D+L R+G EA I+
Sbjct: 471 TYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRK 530
Query: 465 MSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEE 524
M + P+ +W +LLG R+H + +A+ AA + E+EP+N A Y L NIYA +W +
Sbjct: 531 MPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
Query: 525 AKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYV 584
+VR+ + I K PG S IE+ H F+ GD SH + +I+ L EL+++ Y+
Sbjct: 591 REVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYL 650
Query: 585 PDTNFVLHDVEEEQKEQNLF 604
PDT+ +L + + N F
Sbjct: 651 PDTSELLFEAGDAYSVANRF 670
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 179/346 (51%), Gaps = 19/346 (5%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ + K +E+++LL ++R P+ +++AC + + + +RVH
Sbjct: 208 ISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT 267
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
P + + N L++ YA CG + A R+F M RD+ SW +++ GY + G L+ AR FD+
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
MP RD SW I GY+ G E+LE+FR MQ ++FT+ S L A A + L +
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS-AGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G+ I Y+ + + D VV +AL+D+Y KCG ++A+ +F M +D +WT M+
Sbjct: 387 GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLAN 446
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC-----ADHAAEHLGKEVHGYMMRVGY- 333
+G+ +E +F + ++P++ T+ GVL AC D A + K MR +
Sbjct: 447 NGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAK------MRSDHR 500
Query: 334 -DPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
+P +VD+ + G K A + ++P P+ + W +L+G
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGA 546
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 201/429 (46%), Gaps = 52/429 (12%)
Query: 148 GWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKFT-LS 205
G + A KLF ++P D WN I G+ E + ++ M+++ + +S+ F L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 206 SGLAA-AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD 264
+GL A+ C GK++H ++V+ GL + V +AL+ +Y CG +D ARG+FD+
Sbjct: 142 NGLKRDGGALAC---GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK 198
Query: 265 KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEV 324
+DV SW MI EE L ++ + V P T VL AC+ + L K V
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 325 HGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ- 383
H Y+ +P +ALV+ Y+ CG IA R+F + D++SWTS++ G+ + G
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 384 ----------PDR--------------------ALHFFELLLKSGTKPDQITFVGVLSAC 413
P R +L F + +G PD+ T V VL+AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 414 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL 473
H G ++ G E+ + +K+ + + +ID+ + G +A+ + +M + DKF
Sbjct: 379 AHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFT 436
Query: 474 WASLLGGCRIHGNIELAKRAANALFE-----IEPENPATYITLANIYANAGQWAEE---- 524
W +++ G +G + A F+ I+P++ TY+ + + ++G +
Sbjct: 437 WTAMVVGLANNGQ---GQEAIKVFFQMQDMSIQPDD-ITYLGVLSACNHSGMVDQARKFF 492
Query: 525 AKVRKDMEI 533
AK+R D I
Sbjct: 493 AKMRSDHRI 501
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 240/468 (51%), Gaps = 42/468 (8%)
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSW 168
L + G +A A ++F EM ++++ W +MI GY L AR+ FD P RD W
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV 228
N ISGY+ G EA +F M PC
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQM-----------------------PCR----------- 119
Query: 229 RAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFS 288
D + W+ +L+ Y G ++ +FD M +++V SW +I ++GR E
Sbjct: 120 ------DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLG 173
Query: 289 LFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF-AGSALVDL 346
F+ ++ G V PN+ T T VL ACA A GK VH Y +GY+ +AL+D+
Sbjct: 174 SFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDM 233
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y KCG +IA VF I R DL+SW ++I G A +G AL+ F + SG PD++TF
Sbjct: 234 YGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTF 293
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
VGVL AC H GLV+ GL YF+S+ +M +H CV+DLL+R+G +A I+ M
Sbjct: 294 VGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMP 353
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAK 526
+K D +WA+LLG +++ +++ + A L ++EP NPA ++ L+NIY +AG++ + A+
Sbjct: 354 VKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAAR 413
Query: 527 VRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGEL 574
++ M G K+ G SWIE + F HP+ ++ L EL
Sbjct: 414 LKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 177/339 (52%), Gaps = 17/339 (5%)
Query: 47 LCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFIS 106
LC + A + + + L++++I + ++ L RR L+ + I +
Sbjct: 38 LCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERD----IVLW 93
Query: 107 NRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHF 166
N ++ Y + G++ +A+ LFD+M RD+ SWNT++ GYA +G +E ++FD+MP R+ F
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGY 226
SWN I GY +GR E L F+ M S N T++ L+A A + GK +H Y
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 227 LVRAGLD-LDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREE 285
G + +D V +AL+D+YGKCG+++ A +F + +D++SW TMI+ G E
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTE 273
Query: 286 GFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG--YMMRVGYD----PGSFA 339
+LF ++ SG+ P++ TF GVL AC +H+G G Y + D P
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCAC-----KHMGLVEDGLAYFNSMFTDFSIMPEIEH 328
Query: 340 GSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
+VDL S+ G A N++P + D V W +L+G
Sbjct: 329 CGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA 367
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 270/537 (50%), Gaps = 40/537 (7%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALT 94
++ I Q + EA++L + L +T+I+AC + R + +L
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQAR 154
+F+S LL +Y C L DA++LFDEM +R+L +WN M+ GY+K G +EQA
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAE 259
Query: 155 KLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAI 214
+LFD++ +D SW I G + + EAL + M + S + A+A ++
Sbjct: 260 ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSV 319
Query: 215 PCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYG--------------------------- 247
+ G ++HG +V+ G D + + + ++ Y
Sbjct: 320 GSSK-GLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALI 378
Query: 248 ----KCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG-VRPNE 302
K G +++AR +FDQ DKD+ SW MI + + LFR+++ S V+P+
Sbjct: 379 AGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDA 438
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
T V A + + GK H Y+ P +A++D+Y+KCG+ + A +F+Q
Sbjct: 439 ITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQ 498
Query: 363 ---IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLV 419
I + W ++I G A +G AL + L KP+ ITFVGVLSAC HAGLV
Sbjct: 499 TKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLV 558
Query: 420 DKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLG 479
+ G YF S+K HG+ HY C++DLL ++GR EA+ +I M +K D +W LL
Sbjct: 559 ELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLS 618
Query: 480 GCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
R HGN+E+A+ AA L I+P + + L+N+YA+AG+W + A VR++M R +
Sbjct: 619 ASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 241/524 (45%), Gaps = 78/524 (14%)
Query: 67 SPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLF 126
+ R + + +C + GR++H S +I N +L++YAKC LADA+ +F
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 127 DEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALE 186
+ D S+N M+ GY + L A KLFD MP R S+ I GY + + EA+E
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD------------- 233
+FR M ++ N+ TL++ ++A + + + + + ++ L+
Sbjct: 160 LFREM-RNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 234 ------------LDE------VVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
DE V W+ +L+ Y K G +++A +FDQ+ +KD+VSW TMI
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
C + +E + +++ G++P+E +L A A G ++HG +++ G+D
Sbjct: 279 GCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDC 338
Query: 336 GSFAGSALVDLYSKCGNTK-------------IASR------------------VFNQIP 364
F + ++ Y+ + K IASR VF+Q
Sbjct: 339 YDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH 398
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
D+ SW ++I G+AQ+ P ALH F E++ S KPD IT V V SA + G +++G
Sbjct: 399 DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG- 457
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI------IDNMSIKPDKFLWASL 477
+ H + + A +ID+ A+ G A NI I + +I P W ++
Sbjct: 458 KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP----WNAI 513
Query: 478 LGGCRIHGNIELAKRAANAL--FEIEPENPATYITLANIYANAG 519
+ G HG+ +LA + L I+P N T++ + + +AG
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKP-NSITFVGVLSACCHAG 556
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 278/563 (49%), Gaps = 47/563 (8%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
++ CQ +A L + P TLI + ++L+ +HA+
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV 184
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEM--GDRDLCSWNTMIAGYAKLGWLEQARKLF 157
+ ++N + Y KCG L A+ +F+ + GDR + SWN+M Y+ G A L+
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP-C 216
M R + + +S +++ LAA+ P
Sbjct: 245 CLMLREE---FKPDLSTFIN------------------------------LAASCQNPET 271
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
L G+ IH + + G D D + + +Y K AR +FD M + VSWT MI
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
E G +E +LF ++ SG +P+ T ++ C + GK + G
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD 391
Query: 337 S-FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+ +AL+D+YSKCG+ A +F+ P +V+WT++I G+A NG AL F ++
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
KP+ ITF+ VL AC H+G ++KG EYFH +K+ + + DHY+C++DLL R G+
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 456 NEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIY 515
EA +I NMS KPD +W +LL C+IH N+++A++AA +LF +EP+ A Y+ +ANIY
Sbjct: 512 EEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIY 571
Query: 516 ANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELS 575
A AG W A++R M+ R I K PG+S I++ + H F VG+ H + I+ L LS
Sbjct: 572 AAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Query: 576 KKMKEEGYVPDTNFVLHDVEEEQ 598
+ D + + DV +EQ
Sbjct: 632 L------FAKDKHVLYKDVYKEQ 648
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 218/469 (46%), Gaps = 60/469 (12%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + + AC R + VHA S F +F+ +D++ KC S+
Sbjct: 50 PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSV------ 103
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
+ A K+F+ MP RD +WNA +SG+ G +A
Sbjct: 104 -------------------------DYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+FR M+ +E + + T+ + + +A+ L+L + +H +R G+D+ V + +
Sbjct: 139 SLFREMRLNEIT-PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 246 YGKCGSLDEARGIFDQM--VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
YGKCG LD A+ +F+ + D+ VVSW +M G + F L+ ++ +P+
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
TF + +C + G+ +H + + +G D A + + +YSK +T A +F+ +
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
VSWT +I G+A+ G D AL F ++KSG KPD +T + ++S C G ++ G
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG- 376
Query: 424 EYFHSIKEKHGLMHTADHYAC----------VIDLLARSGRFNEAENIIDNMSIKPDKFL 473
+ AD Y C +ID+ ++ G +EA +I DN P+K +
Sbjct: 377 ---------KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN---TPEKTV 424
Query: 474 --WASLLGGCRIHGNIELAKRAANALFEIEPE-NPATYITLANIYANAG 519
W +++ G ++G A + + + +++ + N T++ + A++G
Sbjct: 425 VTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSG 473
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 182/408 (44%), Gaps = 38/408 (9%)
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGY 226
+WN I V+ P E+L +FR M K N FT A A + + + +H +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 227 LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEG 286
L+++ D V +A +D++ KC S+D A +F++M ++D +W M+ + G ++
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
FSLFR++ + + P+ T ++++ + + L + +H +R+G D + +
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 347 YSKCGNTKIASRVFNQIPRPD--LVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
Y KCG+ A VF I R D +VSW S+ ++ G+ A + L+L+ KPD
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 405 TFVGVLSACTHAGLVDKG-LEYFHSI-----KEKHGL-----MHTADHYACVIDLL---- 449
TF+ + ++C + + +G L + H+I ++ + M++ C LL
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM 317
Query: 450 ---------------ARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAK 491
A G +EA + M KPD SL+ GC G++E K
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK 377
Query: 492 --RAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
A ++ + +N L ++Y+ G E + + + +V
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV 425
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
V +W I E LFR++ G PN +TF V KACA A + VH
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
++++ + F G+A VD++ KC + A++VF ++P D +W +++ GF Q+G D+
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
A F + + PD +T + ++ + + + K LE H++ + G+
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSASFEKSL-KLLEAMHAVGIRLGV 184
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 53/258 (20%)
Query: 34 AKTNNNFEEAINALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRR 89
++T ++ I+ ++ + EA+ L H + ++P +LI+ C + +LE G+
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 90 VHALT-----KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGY 144
+ A K N + I N L+D+Y+KCGS+ +A+ +FD ++ + +W TMIAGY
Sbjct: 379 IDARADIYGCKRDN----VMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 145 AKLGWLEQARKLFDEMPRRD----HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSN 200
A G +A KLF +M D H ++ A + G + E F +M++
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ------- 487
Query: 201 KFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFD 260
Y + GLD +S ++DL G+ G L+EA +
Sbjct: 488 ------------------------VYNISPGLDH----YSCMVDLLGRKGKLEEALELIR 519
Query: 261 QMVDK-DVVSWTTMIHRC 277
M K D W +++ C
Sbjct: 520 NMSAKPDAGIWGALLNAC 537
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 255/520 (49%), Gaps = 75/520 (14%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
S ++ AC R ++ G ++H K + +F+ N L+ LY KCG L ++++FD M
Sbjct: 125 SLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPK 184
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFD--------------------------------- 158
RD S+N+MI GY K G + AR+LFD
Sbjct: 185 RDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLF 244
Query: 159 -EMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
+MP +D SWN+ I GYV HGR +A +F +M +
Sbjct: 245 ADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----------------------- 281
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
D V W+ ++D Y K G + A+ +FDQM +DVV++ +M+
Sbjct: 282 -----------------DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 324
Query: 278 FEDGRREEGFSLFRDL-MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
++ E +F D+ S + P++ T VL A A ++H Y++ + G
Sbjct: 325 VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLG 384
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
G AL+D+YSKCG+ + A VF I + W ++IGG A +G + A + +
Sbjct: 385 GKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 444
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
KPD ITFVGVL+AC+H+GLV +GL F ++ KH + HY C++D+L+RSG
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 457 EAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYA 516
A+N+I+ M ++P+ +W + L C H E + A L NP++Y+ L+N+YA
Sbjct: 505 LAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
Query: 517 NAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLV 556
+ G W + +VR M+ R I K PG SWIE+ +VH F V
Sbjct: 565 SFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 186/392 (47%), Gaps = 47/392 (11%)
Query: 164 DHFSWNAAISGYVSHGR-PREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
D F WNA I + SHG+ PR+AL + +M ++ S +KF+LS L A + + ++ G +
Sbjct: 85 DPFLWNAVIKSH-SHGKDPRQALLLLCLMLENGVS-VDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
IHG+L + GL D + + L+ LY KCG L +R +FD+M +D VS+ +MI + G
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 283 REEGFSLFRDLM----------GSGVRPNEYTFTGV---LKACADHAAEHL---GKEVHG 326
LF DLM S + T GV K AD + L + G
Sbjct: 203 IVSARELF-DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDG 261
Query: 327 YMM--RVGYDPGSF---------AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
Y+ R+ G F + ++D Y+K G A +F+Q+P D+V++ S++
Sbjct: 262 YVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMM 321
Query: 376 GGFAQNGQPDRALHFFELLLK-SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
G+ QN AL F + K S PD T V VL A G + K ++ I EK
Sbjct: 322 AGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF 381
Query: 435 LMHTADHYACVIDLLARSGRFNEAENI---IDNMSIKPDKFLWASLLGGCRIHGNIELAK 491
+ A +ID+ ++ G A + I+N SI W +++GG IHG L +
Sbjct: 382 YLGGKLGVA-LIDMYSKCGSIQHAMLVFEGIENKSIDH----WNAMIGGLAIHG---LGE 433
Query: 492 RAANALFEIE----PENPATYITLANIYANAG 519
A + L +IE + T++ + N +++G
Sbjct: 434 SAFDMLLQIERLSLKPDDITFVGVLNACSHSG 465
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 136/299 (45%), Gaps = 33/299 (11%)
Query: 296 SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKI 355
+GV ++++ + VLKAC+ G ++HG++ + G F + L+ LY KCG +
Sbjct: 115 NGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 174
Query: 356 ASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLS--AC 413
+ ++F+++P+ D VS+ S+I G+ + G A F+L+ + I++ ++S A
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM--PMEMKNLISWNSMISGYAQ 232
Query: 414 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL 473
T G VD + F + EK + + +ID + GR +A+ + D M + D
Sbjct: 233 TSDG-VDIASKLFADMPEKDLI-----SWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVT 285
Query: 474 WASLLGGCRIHGNIELAKRAANALFEIEP-ENPATYITLANIYANAGQWAEEAKVRKDME 532
WA+++ G G + AK LF+ P + Y ++ Y E ++ DME
Sbjct: 286 WATMIDGYAKLGFVHHAK----TLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 533 IRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVL 591
++ H+ L DT+ + LG LSK + Y+ + F L
Sbjct: 342 ----------------KESHL-LPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYL 383
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 245/454 (53%), Gaps = 41/454 (9%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
T+I Y+ G + +ARK+FDEMP RD +W +S Y R L+M +S+
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY------RRVLDM-------DSA 954
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
NS +S A + CL I+GY+ GL G+L++A
Sbjct: 955 NSLANQMSEKNEATSN--CL-----INGYM---GL-----------------GNLEQAES 987
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+F+QM KD++SWTTMI ++ R E ++F +M G+ P+E T + V+ ACA
Sbjct: 988 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 1047
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
+GKEVH Y ++ G+ + GSALVD+YSKCG+ + A VF +P+ +L W S+I G
Sbjct: 1048 LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 1107
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
A +G AL F + KP+ +TFV V +ACTHAGLVD+G + S+ + + ++
Sbjct: 1108 LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVS 1167
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL 497
+HY ++ L +++G EA +I NM +P+ +W +LL GCRIH N+ +A+ A N L
Sbjct: 1168 NVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
Query: 498 FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKK-PGKSWIEIKRQVHVFLV 556
+EP N Y L ++YA +W + A++R M GI K PG S I I ++ H+F
Sbjct: 1228 MVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAA 1287
Query: 557 GDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFV 590
D SH ++ L E+ +M GYV +T V
Sbjct: 1288 ADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I Q KR +EA+ + + + P ST+I+AC LE G+ VH T + F
Sbjct: 1004 IKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF 1063
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ ++I + L+D+Y+KCGSL A +F + ++L WN++I G A G+ ++A K+F +
Sbjct: 1064 VLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAK 1123
Query: 160 MP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
M + + ++ + + G E ++R M S SN + +
Sbjct: 1124 MEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAG 1183
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
+ E+ G + + + V+W ALLD
Sbjct: 1184 LIYEALELIGNM---EFEPNAVIWGALLD 1209
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 286 bits (731), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 234/435 (53%), Gaps = 3/435 (0%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP S+++ AC R ALE G+ +HA+ + + +S + D+Y KC L A+R
Sbjct: 260 RPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARR 319
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+FD+ +DL SW + ++GYA G +AR+LFD MP R+ SWNA + GYV EA
Sbjct: 320 VFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEA 379
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L+ +M + E N + TL L + I +++GK+ HG++ R G D + +V +ALLD
Sbjct: 380 LDFLTLM-RQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLD 438
Query: 245 LYGKCGSLDEARGIFDQMVD-KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
+YGKCG+L A F QM + +D VSW ++ GR E+ S F M +P++Y
Sbjct: 439 MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEG-MQVEAKPSKY 497
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
T +L CA+ A +LGK +HG+++R GY A+VD+YSKC A VF +
Sbjct: 498 TLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA 557
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
DL+ W S+I G +NG+ F LL G KPD +TF+G+L AC G V+ G
Sbjct: 558 ATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGF 617
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
+YF S+ K+ + +HY C+I+L + G ++ E + M P + + C+
Sbjct: 618 QYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQR 677
Query: 484 HGNIELAKRAANALF 498
+ +L AA L
Sbjct: 678 YRWSKLGAWAAKRLM 692
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 220/497 (44%), Gaps = 70/497 (14%)
Query: 53 LKEAVDLLHHVDRP-SPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLD 111
+ +AV +L P S LY L +C + Q R+V + + + +P IF+ NR ++
Sbjct: 45 VSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIE 104
Query: 112 LYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAA 171
Y KCG + + AR+LF+EMP RD SWNA
Sbjct: 105 AYGKCGCV-------------------------------DDARELFEEMPERDGGSWNAV 133
Query: 172 ISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAG 231
I+ +G E MFR M + + + + + + L + I LRL +++H +V+ G
Sbjct: 134 ITACAQNGVSDEVFRMFRRMNR-DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYG 192
Query: 232 LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFR 291
+ + ++++D+YGKC + +AR +FD++V+ VSW ++ R E G +E +F
Sbjct: 193 YSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFF 252
Query: 292 DLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCG 351
++ VRP +T + V+ AC+ A +GK +H +++ + +++ D+Y KC
Sbjct: 253 KMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCD 312
Query: 352 NTKIASRVFNQIPRPDLVSWTSLIGGFAQNG----------------------------- 382
+ A RVF+Q DL SWTS + G+A +G
Sbjct: 313 RLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVH 372
Query: 383 --QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTAD 440
+ D AL F L+ + D +T V +L+ C+ V G + H +HG
Sbjct: 373 AHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA-HGFIYRHGYDTNVI 431
Query: 441 HYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE- 499
++D+ + G A MS D+ W +LL G G E A + FE
Sbjct: 432 VANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSE----QALSFFEG 487
Query: 500 IEPENPATYITLANIYA 516
++ E + TLA + A
Sbjct: 488 MQVEAKPSKYTLATLLA 504
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 213/484 (44%), Gaps = 73/484 (15%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYST----LIAACVRHRALEQGRRV 90
+ ++ I A Q E + ++R R T ++ +C L R++
Sbjct: 125 RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQL 184
Query: 91 HALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWL 150
H + + + ++D+Y KC ++DA+R+FDE+ + SWN ++ Y ++G+
Sbjct: 185 HCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFN 244
Query: 151 EQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
++A +F F+M++ + ++ T+SS + A
Sbjct: 245 DEAVVMF------------------------------FKMLELNVRPLNH--TVSSVMLA 272
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSW 270
+ L +GK IH V+ + D VV +++ D+Y KC L+ AR +FDQ KD+ SW
Sbjct: 273 CSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSW 332
Query: 271 TTMIHRCFEDGRREEGFSLFRDLM------------GSGVRPNEY--------------- 303
T+ + G E LF DLM G V +E+
Sbjct: 333 TSAMSGYAMSGLTREARELF-DLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE 391
Query: 304 -----TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR 358
T +L C+ + +GK+ HG++ R GYD +AL+D+Y KCG + A+
Sbjct: 392 NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 359 VFNQIPR-PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAG 417
F Q+ D VSW +L+ G A+ G+ ++AL FFE ++ KP + T +L+ C +
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE-GMQVEAKPSKYTLATLLAGCANIP 510
Query: 418 LVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASL 477
++ G + H + G ++D+ ++ F+ A + + + D LW S+
Sbjct: 511 ALNLG-KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSI 568
Query: 478 LGGC 481
+ GC
Sbjct: 569 IRGC 572
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 7/282 (2%)
Query: 243 LDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
++ YGKCG +D+AR +F++M ++D SW +I C ++G +E F +FR + GVR E
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
+F GVLK+C L +++H +++ GY +++VD+Y KC A RVF++
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 363 IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
I P VSW ++ + + G D A+ F +L+ +P T V+ AC+ + ++ G
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 423 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCR 482
+ H+I K ++ V D+ + R A + D K D W S + G
Sbjct: 283 -KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK-DLKSWTSAMSGYA 340
Query: 483 IHGNIELAKRAANALFEIEPE-NPATYITLANIYANAGQWAE 523
+ G R A LF++ PE N ++ + Y +A +W E
Sbjct: 341 MSG----LTREARELFDLMPERNIVSWNAMLGGYVHAHEWDE 378
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/469 (34%), Positives = 250/469 (53%), Gaps = 41/469 (8%)
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ---KHESSNSNKFTLSS 206
L ARKLFD F +N I Y H +P E++ ++ ++ S ++ F ++
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
+ ++A P LRL +H R+G + D + L+ Y K G+L AR +FD+M +D
Sbjct: 92 SASFSSARP-LRL---LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRD 147
Query: 267 V-------------------------------VSWTTMIHRCFEDGRREEGFSLFRDL-M 294
V SWTT+I ++G E +F +
Sbjct: 148 VPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEK 207
Query: 295 GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK 354
V+PN T VL ACA+ +G+ + GY G+ + +A +++YSKCG
Sbjct: 208 DKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMID 267
Query: 355 IASRVFNQI-PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC 413
+A R+F ++ + +L SW S+IG A +G+ D AL F +L+ G KPD +TFVG+L AC
Sbjct: 268 VAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC 327
Query: 414 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL 473
H G+V KG E F S++E H + +HY C+IDLL R G+ EA ++I M +KPD +
Sbjct: 328 VHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVV 387
Query: 474 WASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEI 533
W +LLG C HGN+E+A+ A+ ALF++EP NP + ++NIYA +W ++RK M+
Sbjct: 388 WGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKK 447
Query: 534 RGIVKKPGKSW-IEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEE 581
+ K G S+ +E+ VH F V D SHP+ +I++ L E+ ++MK E
Sbjct: 448 ETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 171/326 (52%), Gaps = 3/326 (0%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RPS ++ + AA + R +H+ S F F L+ YAK G+L A+R
Sbjct: 79 RPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARR 138
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+FDEM RD+ WN MI GY + G ++ A +LFD MPR++ SW ISG+ +G EA
Sbjct: 139 VFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEA 198
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L+MF M+K +S N T+ S L A A + L +G+ + GY G + V +A ++
Sbjct: 199 LKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIE 258
Query: 245 LYGKCGSLDEARGIFDQMVD-KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
+Y KCG +D A+ +F+++ + +++ SW +MI G+ +E +LF ++ G +P+
Sbjct: 259 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAV 318
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
TF G+L AC G+E+ M V P ++DL + G + A +
Sbjct: 319 TFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKT 378
Query: 363 IP-RPDLVSWTSLIGGFAQNGQPDRA 387
+P +PD V W +L+G + +G + A
Sbjct: 379 MPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/478 (31%), Positives = 252/478 (52%), Gaps = 35/478 (7%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y TLI AC + AL QG+ H S + LLD+Y KCG +++A
Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA-------- 296
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
R++F+E D W A I GY +G EAL +F+
Sbjct: 297 -----------------------RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M+ E N T++S L+ I L LG+ +HG ++ G+ D V +AL+ +Y KC
Sbjct: 334 MKGVEI-KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCY 391
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
+A+ +F+ +KD+V+W ++I ++G E LF + V PN T +
Sbjct: 392 QNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFS 451
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGS--FAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
ACA + +G +H Y +++G+ S G+AL+D Y+KCG+ + A +F+ I +
Sbjct: 452 ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
++W+++IGG+ + G +L FE +LK KP++ TF +LSAC H G+V++G +YF S
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
+ + + + HY C++D+LAR+G +A +II+ M I+PD + + L GC +H +
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFD 631
Query: 489 LAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
L + + ++ P++ + Y+ ++N+YA+ G+W + +VR M+ RG+ K G S +E
Sbjct: 632 LGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 226/492 (45%), Gaps = 45/492 (9%)
Query: 48 CQQKRLKEAVDL----LHHVDRPSPRLYSTLIAACVRHRALEQGRRVHA-LTKSSNFIPG 102
C K E V L + H R ++S + AC + L+ G+++H L K +F
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV 177
Query: 103 IFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPR 162
+ LLD+YAKCG + A ++F+++ R++ W +MIAGY K E+ LF+ M
Sbjct: 178 VLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM-- 233
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
R L N++T + + A + L GK
Sbjct: 234 -----------------RENNVL-------------GNEYTYGTLIMACTKLSALHQGKW 263
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
HG LV++G++L + ++LLD+Y KCG + AR +F++ D+V WT MI +G
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSA 342
E SLF+ + G ++PN T VL C LG+ VHG ++VG + A +A
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA-NA 382
Query: 343 LVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
LV +Y+KC + A VF D+V+W S+I GF+QNG AL F + P+
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA--CVIDLLARSGRFNEAEN 460
+T + SAC G + G H+ K G + ++ + ++D A+ G A
Sbjct: 443 GVTVASLFSACASLGSLAVG-SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 461 IIDNMSIKPDKFLWASLLGGCRIHGN-IELAKRAANALFEIEPENPATYITLANIYANAG 519
I D + K + W++++GG G+ I + L + + N +T+ ++ + + G
Sbjct: 502 IFDTIEEK-NTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Query: 520 QWAEEAKVRKDM 531
E K M
Sbjct: 561 MVNEGKKYFSSM 572
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 189/365 (51%), Gaps = 13/365 (3%)
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
MGD + + +++ Y G+ + AR +FD++P D + W + Y + E ++++
Sbjct: 73 MGDISIAT--KLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY 130
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
++ KH + S L A + L GK+IH LV+ D VV + LLD+Y K
Sbjct: 131 DLLMKH-GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAK 188
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
CG + A +F+ + ++VV WT+MI ++ EEG LF + + V NEYT+ +
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
+ AC +A H GK HG +++ G + S ++L+D+Y KCG+ A RVFN+ DL
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY--- 425
V WT++I G+ NG + AL F+ + KP+ +T VLS C GL++ LE
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN-LELGRS 364
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
H + K G+ T A ++ + A+ + +A+ + + M + D W S++ G +G
Sbjct: 365 VHGLSIKVGIWDTNVANA-LVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNG 422
Query: 486 NIELA 490
+I A
Sbjct: 423 SIHEA 427
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 160/327 (48%), Gaps = 22/327 (6%)
Query: 206 SGLAAAAAIPCLRLG---------KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
S L AA+ PC L ++ HG L GL D + + L+ LYG G +AR
Sbjct: 37 SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRRE-EGFSLFRDLMGSGVRPNEYTFTGVLKACADH 315
+FDQ+ + D W M+ RC+ + E L+ LM G R ++ F+ LKAC +
Sbjct: 97 LVFDQIPEPDFYLWKVML-RCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTEL 155
Query: 316 AAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSL 374
GK++H +++V +D G L+D+Y+KCG K A +VFN I ++V WTS+
Sbjct: 156 QDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 375 IGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
I G+ +N + L F + ++ ++ T+ ++ ACT + +G ++FH K G
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG-KWFHGCLVKSG 272
Query: 435 LMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAA 494
+ ++ ++D+ + G + A + + S D +W +++ G +G++ A
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 495 NAL--FEIEPENPATYITLANIYANAG 519
+ EI+P +T+A++ + G
Sbjct: 332 QKMKGVEIKPN----CVTIASVLSGCG 354
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 269/516 (52%), Gaps = 33/516 (6%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P ++ I AC+ LE+G V + +F+ + +L+LY KCG + +A+
Sbjct: 113 QPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEV 172
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
LF +M RD+ W TM+ G+A+ G+ +A
Sbjct: 173 LFGKMAKRDVICWTTMVTGFAQ-------------------------------AGKSLKA 201
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
+E +R MQ +E ++ + L A+ + ++G+ +HGYL R GL ++ VV ++L+D
Sbjct: 202 VEFYREMQ-NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVD 260
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y K G ++ A +F +M+ K VSW ++I ++G + F ++ G +P+ T
Sbjct: 261 MYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVT 320
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
GVL AC+ + G+ VH Y+++ + +AL+D+YSKCG + +F +
Sbjct: 321 LVGVLVACSQVGSLKTGRLVHCYILK-RHVLDRVTATALMDMYSKCGALSSSREIFEHVG 379
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
R DLV W ++I + +G + F + +S +PD TF +LSA +H+GLV++G
Sbjct: 380 RKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQH 439
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
+F + K+ + + HY C+IDLLAR+GR EA ++I++ + +W +LL GC H
Sbjct: 440 WFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
N+ + AAN + ++ P++ ++N +A A +W E AKVRK M + K PG S
Sbjct: 500 RNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSA 559
Query: 545 IEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKE 580
IE+ ++ FL+ D SH + + + L L ++++
Sbjct: 560 IEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRD 595
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 222/447 (49%), Gaps = 27/447 (6%)
Query: 78 CVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSW 137
C+ HR L +R+ L S I ++ G+L + + RDL
Sbjct: 8 CMLHRTLLCPKRIKFLQSISKLKRHI---TQIHAFVISTGNLLNGSSI-----SRDL--- 56
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF-RMMQKHES 196
IA ++G + ARK+FDE+P+R +N+ I Y P E L ++ +M+ +
Sbjct: 57 ---IASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQ 113
Query: 197 SNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
+S+ FT++ + A + L G+ + V G D V S++L+LY KCG +DEA
Sbjct: 114 PDSSTFTMT--IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAE 171
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+F +M +DV+ WTTM+ + G+ + +R++ G + G+L+A D
Sbjct: 172 VLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLG 231
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
+G+ VHGY+ R G ++LVD+Y+K G ++ASRVF+++ VSW SLI
Sbjct: 232 DTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLIS 291
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
GFAQNG ++A + G +PD +T VGVL AC+ G + G I ++H L
Sbjct: 292 GFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD 351
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN----IELAKR 492
++D+ ++ G + + I +++ + D W +++ IHGN + L +
Sbjct: 352 RVTA--TALMDMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 493 AANALFEIEPENPATYITLANIYANAG 519
+ IEP++ AT+ +L + +++G
Sbjct: 409 MTES--NIEPDH-ATFASLLSALSHSG 432
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/380 (38%), Positives = 225/380 (59%), Gaps = 2/380 (0%)
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
K + + + + LSS + + R G H ++ G D + S+L+ LY G +
Sbjct: 112 KRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEV 171
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
+ A +F++M +++VVSWT MI ++ R + L+ + S PN+YTFT +L AC
Sbjct: 172 ENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSAC 231
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
A G+ VH + +G ++L+ +Y KCG+ K A R+F+Q D+VSW
Sbjct: 232 TGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWN 291
Query: 373 SLIGGFAQNGQPDRALHFFELLL-KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKE 431
S+I G+AQ+G +A+ FEL++ KSGTKPD IT++GVLS+C HAGLV +G ++F+ + E
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 432 KHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAK 491
HGL +HY+C++DLL R G EA +I+NM +KP+ +W SLL CR+HG++
Sbjct: 352 -HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 492 RAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQV 551
RAA +EP+ AT++ LAN+YA+ G W E A VRK M+ +G+ PG SWIEI V
Sbjct: 411 RAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYV 470
Query: 552 HVFLVGDTSHPKIRDIHEFL 571
+F D S+ ++ +I L
Sbjct: 471 FMFKAEDGSNCRMLEIVHVL 490
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 139/306 (45%), Gaps = 34/306 (11%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
S+ + +C +R G H L FI +++ + L+ LY G +
Sbjct: 124 SSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEV------------ 171
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMM 191
E A K+F+EMP R+ SW A ISG+ R L+++ M
Sbjct: 172 -------------------ENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM 212
Query: 192 QKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGS 251
+K +S+ N +T ++ L+A L G+ +H + GL + ++L+ +Y KCG
Sbjct: 213 RK-STSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 252 LDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM-GSGVRPNEYTFTGVLK 310
L +A IFDQ +KDVVSW +MI + G + LF +M SG +P+ T+ GVL
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLS 331
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLV 369
+C G++ M G P S LVDL + G + A + +P +P+ V
Sbjct: 332 SCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSV 391
Query: 370 SWTSLI 375
W SL+
Sbjct: 392 IWGSLL 397
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ Q+ R+ + L + + P+ ++ L++AC AL QGR VH T
Sbjct: 193 ISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGL 252
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ ISN L+ +Y KCG L DA R+FD+ ++D+ SWN+MIAGYA+
Sbjct: 253 KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQ------------- 299
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
HG +A+E+F +M + + T L++ ++
Sbjct: 300 ------------------HGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKE 341
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK-DVVSWTTMIHRC 277
G++ + GL + +S L+DL G+ G L EA + + M K + V W +++ C
Sbjct: 342 GRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSC 400
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/545 (29%), Positives = 279/545 (51%), Gaps = 66/545 (12%)
Query: 36 TNNNFEEAINALCQQKRLKEAVDLLHH----------------VDRPSPRLYSTLI---- 75
++ ++ I+ C+ + EAV L H VD+ SPR L+
Sbjct: 172 SSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQR 231
Query: 76 --------------AACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLAD 121
AC L G+++H S F + L+D+Y+ CGSL
Sbjct: 232 EGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIY 291
Query: 122 AQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRP 181
A +F + + + N+ +A WN+ +SG++ +
Sbjct: 292 AADVFHQ----EKLAVNSSVA------------------------VWNSMLSGFLINEEN 323
Query: 182 REALEMFRMMQKHESSNS-NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWS 240
AL + ++Q ++S + +TLS L LRLG ++H +V +G +LD +V S
Sbjct: 324 EAAL--WLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGS 381
Query: 241 ALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRP 300
L+DL+ G++ +A +F ++ +KD+++++ +I C + G F LFR+L+ G+
Sbjct: 382 ILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDA 441
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVF 360
+++ + +LK C+ A+ GK++HG ++ GY+ +ALVD+Y KCG +F
Sbjct: 442 DQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLF 501
Query: 361 NQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD 420
+ + D+VSWT +I GF QNG+ + A +F ++ G +P+++TF+G+LSAC H+GL++
Sbjct: 502 DGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLE 561
Query: 421 KGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+ ++K ++GL +HY CV+DLL ++G F EA +I+ M ++PDK +W SLL
Sbjct: 562 EARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTA 621
Query: 481 CRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKP 540
C H N L A L + P++P+ Y +L+N YA G W + +KVR+ + G K+
Sbjct: 622 CGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKES 680
Query: 541 GKSWI 545
G SWI
Sbjct: 681 GMSWI 685
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 228/467 (48%), Gaps = 8/467 (1%)
Query: 70 LYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEM 129
+YS ++ AC ++ G V+ N + + N ++D+Y K G L +A F E+
Sbjct: 109 MYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI 168
Query: 130 GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFR 189
SWNT+I+GY K G +++A LF MP+ + SWN ISG+V G PR ALE
Sbjct: 169 LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLV 227
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
MQ+ E + F L GL A + L +GK++H +V++GL+ SAL+D+Y C
Sbjct: 228 RMQR-EGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNC 286
Query: 250 GSLDEARGIFDQ---MVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
GSL A +F Q V+ V W +M+ + E L + S + + YT +
Sbjct: 287 GSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLS 346
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
G LK C ++ LG +VH ++ GY+ GS LVDL++ GN + A ++F+++P
Sbjct: 347 GALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK 406
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
D+++++ LI G ++G A + F L+K G DQ +L C+ + G +
Sbjct: 407 DIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG-KQI 465
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
H + K G ++D+ + G + + D M ++ D W ++ G +G
Sbjct: 466 HGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGR 524
Query: 487 IELAKRAANALFEIEPE-NPATYITLANIYANAGQWAEEAKVRKDME 532
+E A R + + I E N T++ L + ++G E + M+
Sbjct: 525 VEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMK 571
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 191/455 (41%), Gaps = 72/455 (15%)
Query: 74 LIAACVRH----RALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEM 129
LIAA +RH +A ++G + A +FI+N ++ +Y L+DA
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH------ 60
Query: 130 GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFR 189
K+FDEM R+ +W +SGY S G+P +A+E++R
Sbjct: 61 -------------------------KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYR 95
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIH------------------------- 224
M E +N+F S+ L A + ++LG ++
Sbjct: 96 RMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKN 155
Query: 225 GYLVRAGLDLDEVV------WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
G L+ A E++ W+ L+ Y K G +DEA +F +M +VVSW +I F
Sbjct: 156 GRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISG-F 214
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
D + G+ + + LKAC+ +GK++H +++ G + F
Sbjct: 215 VDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPF 274
Query: 339 AGSALVDLYSKCGNTKIASRVFNQ---IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
A SAL+D+YS CG+ A+ VF+Q + W S++ GF N + + AL +
Sbjct: 275 AISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIY 334
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+S D T G L C + + GL+ HS+ G + ++DL A G
Sbjct: 335 QSDLCFDSYTLSGALKICINYVNLRLGLQ-VHSLVVVSGYELDYIVGSILVDLHANVGNI 393
Query: 456 NEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
+A + + K D ++ L+ GC G LA
Sbjct: 394 QDAHKLFHRLPNK-DIIAFSGLIRGCVKSGFNSLA 427
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 244/444 (54%), Gaps = 31/444 (6%)
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLA 209
++ A +LF+++ + F +N+ I Y + + + +++ + + ++FT
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 210 AAAAIPCLRLGKEIHGYLVRAG-----------LDL--------------------DEVV 238
+ A++ LGK++HG+L + G +D+ D +
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 239 WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV 298
W++LL Y + G + +A+G+F M+DK +VSWT MI G E FR++ +G+
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 299 RPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR 358
P+E + VL +CA + LGK +H Y R G+ + +AL+++YSKCG A +
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 359 VFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGL 418
+F Q+ D++SW+++I G+A +G A+ F + ++ KP+ ITF+G+LSAC+H G+
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 419 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLL 478
+GL YF +++ + + +HY C+ID+LAR+G+ A I M +KPD +W SLL
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Query: 479 GGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVK 538
CR GN+++A A + L E+EPE+ Y+ LANIYA+ G+W + +++RK + + K
Sbjct: 418 SSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK 477
Query: 539 KPGKSWIEIKRQVHVFLVGDTSHP 562
PG S IE+ V F+ GD S P
Sbjct: 478 TPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/341 (33%), Positives = 171/341 (50%), Gaps = 21/341 (6%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIP--GIFISNRLLDLYAKCGSLADAQ 123
P + + +C + G++VH F P + N L+D+Y K L DA
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHG--HLCKFGPRFHVVTENALIDMYMKFDDLVDAH 164
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
++FDEM +RD+ SWN++++GYA+LG +++A+ LF M + SW A ISGY G E
Sbjct: 165 KVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
A++ FR MQ ++ +L S L + A + L LGK IH Y R G V +AL+
Sbjct: 225 AMDFFREMQL-AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
++Y KCG + +A +F QM KDV+SW+TMI G F ++ + V+PN
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 304 TFTGVLKACADHAAEHLGKEVHGY----MMRVGY--DPGSFAGSALVDLYSKCGNTKIAS 357
TF G+L AC+ H+G G MMR Y +P L+D+ ++ G + A
Sbjct: 344 TFLGLLSACS-----HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAV 398
Query: 358 RVFNQIP-RPDLVSWTSLIGGFAQNGQPDRAL----HFFEL 393
+ +P +PD W SL+ G D AL H EL
Sbjct: 399 EITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 439
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 9/241 (3%)
Query: 297 GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIA 356
G+R E F L+ + + K+++ ++ G SF + +VD K + A
Sbjct: 5 GIREVENYFIPFLQRVK---SRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYA 61
Query: 357 SRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSACTH 415
+R+FNQ+ P++ + S+I + N + + +LL KS PD+ TF + +C
Sbjct: 62 TRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCAS 121
Query: 416 AGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWA 475
G G + + + H A +ID+ + +A + D M + D W
Sbjct: 122 LGSCYLGKQVHGHLCKFGPRFHVVTENA-LIDMYMKFDDLVDAHKVFDEM-YERDVISWN 179
Query: 476 SLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
SLL G G ++ AK + + + + ++ + + Y G + E ++M++ G
Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMLD---KTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 536 I 536
I
Sbjct: 237 I 237
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 283/536 (52%), Gaps = 36/536 (6%)
Query: 50 QKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGI-FISNR 108
+K L+ +++ P+ +++++C + +G+ VH P +S
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLA 344
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSW 168
L++LYA+CG L+D + + + DR++ +W
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNI-------------------------------VAW 373
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV 228
N+ IS Y G +AL +FR M + + FTL+S ++A + LGK+IHG+++
Sbjct: 374 NSLISLYAHRGMVIQALGLFRQMVT-QRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 229 RAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFS 288
R + DE V ++L+D+Y K GS+D A +F+Q+ + VV+W +M+ ++G E S
Sbjct: 433 RTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 289 LFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYS 348
LF + S + NE TF V++AC+ + GK VH ++ G F +AL+D+Y+
Sbjct: 492 LFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYA 550
Query: 349 KCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVG 408
KCG+ A VF + +VSW+S+I + +G+ A+ F +++SGTKP+++ F+
Sbjct: 551 KCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMN 610
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK 468
VLSAC H+G V++G YF+ +K G+ ++H+AC IDLL+RSG EA I M
Sbjct: 611 VLSACGHSGSVEEGKYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFL 669
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVR 528
D +W SL+ GCRIH +++ K N L +I ++ Y L+NIYA G+W E ++R
Sbjct: 670 ADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLR 729
Query: 529 KDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYV 584
M+ + K PG S IEI ++V F G+ + + +I+ FLG L EE V
Sbjct: 730 SAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHVV 785
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 149/591 (25%), Positives = 258/591 (43%), Gaps = 117/591 (19%)
Query: 53 LKEAVDLLHHV----DRPSPRLYSTLIAACVRHRA-LEQGRRVHALTKSSNFIPGIFISN 107
L A+DL H + + S ++ +++ AC R L G +VH I
Sbjct: 81 LDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIET 140
Query: 108 RLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIA------------------------- 142
LL +Y + G+L+DA+++FD M RDL +W+T+++
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP 200
Query: 143 ----------GYAKLGWLEQAR-----------------------------------KLF 157
G A+LG L AR ++F
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
+++ +++ SW A IS Y +AL F M K N TL S L++ I +
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK-SGIEPNLVTLYSVLSSCGLIGLI 319
Query: 218 RLGKEIHGYLVRAGLDLD-EVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
R GK +HG+ VR LD + E + AL++LY +CG L + + + D+++V+W ++I
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
G + LFR ++ ++P+ +T + AC + LGK++HG+++R
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD- 438
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
F ++L+D+YSK G+ AS VFNQI +V+W S++ GF+QNG A+ F+ +
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
S + +++TF+ V+ AC+ G ++KG ++ H GL A +ID+ A+ G N
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKG-KWVHHKLIISGLKDLFTDTA-LIDMYAKCGDLN 556
Query: 457 EAENIIDNM----------------------------------SIKPDKFLWASLLGGCR 482
AE + M KP++ ++ ++L C
Sbjct: 557 AAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACG 616
Query: 483 IHGNIELAKRAANAL--FEIEPENPATYITLANIYANAGQWAEEAKVRKDM 531
G++E K N + F + P N + ++ + +G E + K+M
Sbjct: 617 HSGSVEEGKYYFNLMKSFGVSP-NSEHFACFIDLLSRSGDLKEAYRTIKEM 666
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 215/442 (48%), Gaps = 38/442 (8%)
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMM 191
RD +I YA +G + +R +F+ P D F + I V A++++ +
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 192 QKHESSNSNKFTLSSGL-AAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
E++ +KF S L A A + L +G ++HG +++ G+D D V+ ++LL +YG+ G
Sbjct: 92 VS-ETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
+L +A +FD M +D+V+W+T++ C E+G + +F+ ++ GV P+ T V++
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
CA+ + + VHG + R +D ++L+ +YSKCG+ + R+F +I + + VS
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK 430
WT++I + + ++AL F ++KSG +P+ +T VLS+C GL+ +G + H
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG-KSVHGFA 329
Query: 431 EKHGLMHTADHYA-CVIDLLARSGRFNEAENIIDNMS----------------------- 466
+ L + + +++L A G+ ++ E ++ +S
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQA 389
Query: 467 -----------IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIY 515
IKPD F AS + C G + L K+ + + + +L ++Y
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMY 449
Query: 516 ANAGQWAEEAKVRKDMEIRGIV 537
+ +G + V ++ R +V
Sbjct: 450 SKSGSVDSASTVFNQIKHRSVV 471
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/510 (31%), Positives = 275/510 (53%), Gaps = 25/510 (4%)
Query: 78 CVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLAD---AQRLFDEMGDRDL 134
C R L+Q +HA + I ++R+L C S +D A +F + ++
Sbjct: 35 CSTMRELKQ---IHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRINHKNP 89
Query: 135 CSWNTMIAGYAKLGWLEQARKLFDEM--------PRRDHFSWNAAISGYVSHGRPREALE 186
WNT+I G+++ + E A +F +M P+R ++ + Y G+ R+ +
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFKAYGRLGQARDGRQ 147
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL-DLDEVVWSALLDL 245
+ M+ K E + F ++ L CL I + + G+ D V W++++
Sbjct: 148 LHGMVIK-EGLEDDSFIRNTMLHMYVTCGCL-----IEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
+ KCG +D+A+ +FD+M ++ VSW +MI +GR ++ +FR++ V+P+ +T
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+L ACA A G+ +H Y++R ++ S +AL+D+Y KCG + VF P+
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
L W S+I G A NG +RA+ F L +SG +PD ++F+GVL+AC H+G V + E+
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
F +KEK+ + + HY ++++L +G EAE +I NM ++ D +W+SLL CR G
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Query: 486 NIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
N+E+AKRAA L +++P+ Y+ L+N YA+ G + E + R M+ R + K+ G S I
Sbjct: 442 NVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Query: 546 EIKRQVHVFLVGDTSHPKIRDIHEFLGELS 575
E+ +VH F+ +HPK +I+ L L+
Sbjct: 502 EVDFEVHEFISCGGTHPKSAEIYSLLDILN 531
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 193/372 (51%), Gaps = 6/372 (1%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P Y ++ A R GR++H + FI N +L +Y CG L +A R
Sbjct: 123 KPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWR 182
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+F M D+ +WN+MI G+AK G ++QA+ LFDEMP+R+ SWN+ ISG+V +GR ++A
Sbjct: 183 IFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDA 242
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L+MFR MQ+ + + FT+ S L A A + G+ IH Y+VR +L+ +V +AL+D
Sbjct: 243 LDMFREMQEKD-VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALID 301
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y KCG ++E +F+ K + W +MI +G E LF +L SG+ P+ +
Sbjct: 302 MYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 305 FTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
F GVL ACA H E M + +P + +V++ G + A + +
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Query: 364 P-RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT-FVGVLSACTHAGLVDK 421
P D V W+SL+ + G + A + L K PD+ +V + +A GL ++
Sbjct: 422 PVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKK--LDPDETCGYVLLSNAYASYGLFEE 479
Query: 422 GLEYFHSIKEKH 433
+E +KE+
Sbjct: 480 AVEQRLLMKERQ 491
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/487 (31%), Positives = 252/487 (51%), Gaps = 37/487 (7%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE---ALEM 187
+RD + I + G L A +F P + + N I P A+ +
Sbjct: 44 NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITV 103
Query: 188 FRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYG 247
+R + + + FT L A + + G++IHG +V G D V + L+ +Y
Sbjct: 104 YRKLWA-LCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYF 162
Query: 248 KCGSLDEARGIFDQMVDKDV---------------------------------VSWTTMI 274
CG L +AR +FD+M+ KDV VSWT +I
Sbjct: 163 SCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVI 222
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYD 334
+ GR E +F+ ++ V P+E T VL ACAD + LG+ + Y+ G +
Sbjct: 223 SGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN 282
Query: 335 PGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELL 394
+A++D+Y+K GN A VF + ++V+WT++I G A +G AL F +
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
Query: 395 LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 454
+K+G +P+ +TF+ +LSAC+H G VD G F+S++ K+G+ +HY C+IDLL R+G+
Sbjct: 343 VKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGK 402
Query: 455 FNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANI 514
EA+ +I +M K + +W SLL +H ++EL +RA + L ++EP N Y+ LAN+
Sbjct: 403 LREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANL 462
Query: 515 YANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGEL 574
Y+N G+W E +R M+ G+ K G+S IE++ +V+ F+ GD +HP++ IHE L E+
Sbjct: 463 YSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Query: 575 SKKMKEE 581
+++ +
Sbjct: 523 DLQIQSK 529
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 169/317 (53%), Gaps = 5/317 (1%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P + ++ VR + GR++H F + + L+ +Y CG L DA++
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP--RRDHFSWNAAISGYVSHGRPR 182
+FDEM +D+ WN ++AGY K+G +++AR L + MP R+ SW ISGY GR
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 183 EALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSAL 242
EA+E+F+ M E+ ++ TL + L+A A + L LG+ I Y+ G++ + +A+
Sbjct: 233 EAIEVFQRMLM-ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAV 291
Query: 243 LDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
+D+Y K G++ +A +F+ + +++VV+WTT+I G E ++F ++ +GVRPN+
Sbjct: 292 IDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
TF +L AC+ LGK + M + G P ++DL + G + A V
Sbjct: 352 VTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 362 QIP-RPDLVSWTSLIGG 377
+P + + W SL+
Sbjct: 412 SMPFKANAAIWGSLLAA 428
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 160/370 (43%), Gaps = 47/370 (12%)
Query: 200 NKFTLSSGL---AAAAAI--PCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDE 254
N +LSSGL + I L+ K+ H Y++ GL+ D + + ++ G L
Sbjct: 6 NALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRY 65
Query: 255 ARGIFDQMVDKDVVSWTTMIHRCF---EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA 311
A +F + TMI E +++R L +P+ +TF VLK
Sbjct: 66 AYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKI 125
Query: 312 CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL--- 368
+ G+++HG ++ G+D + L+ +Y CG A ++F+++ D+
Sbjct: 126 AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVW 185
Query: 369 ------------------------------VSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
VSWT +I G+A++G+ A+ F+ +L
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
+PD++T + VLSAC G ++ G E S + G+ VID+ A+SG +A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELG-ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYA 516
++ + ++ + + W +++ G HG+ A N + + + P N T+I + + +
Sbjct: 305 LDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRP-NDVTFIAILSACS 362
Query: 517 NAGQWAEEAK 526
+ G W + K
Sbjct: 363 HVG-WVDLGK 371
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/654 (27%), Positives = 299/654 (45%), Gaps = 120/654 (18%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACV---RHRALEQGRRVHAL 93
NN +A + C LKE + P+ + ++ C ++ A GR++H+
Sbjct: 202 NNMMADAFRSFCLM--LKEPTE-------PNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 94 TKSSNFIPG-IFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQ 152
+++ +F+ N L+ Y + G + +A LF MG +DL SWN +IAGYA +
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFK 312
Query: 153 ARKLFDEMPRRDHFS-----------------------------------------WNAA 171
A +LF + + S NA
Sbjct: 313 AFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNAL 372
Query: 172 ISGYVSHGRPREALEMFRMMQKHESSNSN-------------------------KFTLSS 206
IS Y G A F +M + + N TL S
Sbjct: 373 ISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDS 432
Query: 207 GLAAAAAIPCLR---LGK--EIHGYLVRAGLDLDE---VVWSALLDLYGKCGSL------ 252
+ C+ +GK E+HGY V+AGL DE + +ALLD Y KCG++
Sbjct: 433 VTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKI 492
Query: 253 --------------------------DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEG 286
D+A+ +F +M D+ +W+ M+ E E
Sbjct: 493 FLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEA 552
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
+FR++ G+RPN T +L CA A+ HL ++ HGY++R G G+ L+D+
Sbjct: 553 IGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGT-LLDV 611
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
Y+KCG+ K A VF R DLV +T+++ G+A +G+ AL + + +S KPD +
Sbjct: 612 YAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFI 671
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS 466
+L+AC HAGL+ GL+ + SI+ HG+ T + YAC +DL+AR GR ++A + + M
Sbjct: 672 TTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMP 731
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAK 526
++P+ +W +LL C + ++L AN L + E ++ ++ ++N+YA +W +
Sbjct: 732 VEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVME 791
Query: 527 VRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKE 580
+R M+ + + K G SW+E+ Q +VF+ GD SHP+ I + + L +MKE
Sbjct: 792 LRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 232/512 (45%), Gaps = 23/512 (4%)
Query: 41 EEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFI 100
+ +N + +R+ + + +D P +++ ++ E R A+ +
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPK 119
Query: 101 PGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYAKLGWL-EQARK 155
P +L L + G + + + + ++D N +++ YAK G++ A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAA-- 213
FD + +D SWNA I+G+ + +A F +M K E + N T+++ L A+
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK-EPTEPNYATIANVLPVCASMD 238
Query: 214 --IPCLRLGKEIHGYLV-RAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSW 270
I C R G++IH Y+V R+ L V ++L+ Y + G ++EA +F +M KD+VSW
Sbjct: 239 KNIAC-RSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 271 TTMIHRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMM 329
+I + + F LF +L+ G V P+ T +L CA GKE+H Y++
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 330 RVGYD-PGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
R Y + G+AL+ Y++ G+T A F+ + D++SW +++ FA + + + L
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA---CV 445
+ LL D +T + +L C + + K E H K GL+H + +
Sbjct: 418 NLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE-VHGYSVKAGLLHDEEEPKLGNAL 476
Query: 446 IDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALF-EIEPEN 504
+D A+ G A I +S + + SLL G G + A LF E+ +
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSG----SHDDAQMLFTEMSTTD 532
Query: 505 PATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
T+ + IYA + E V ++++ RG+
Sbjct: 533 LTTWSLMVRIYAESCCPNEAIGVFREIQARGM 564
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 18/311 (5%)
Query: 179 GRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVV 238
G R+ ++ FR++ ++ + A A++ L G+ +HG + + G V
Sbjct: 2 GPLRQFVQNFRLLSGF---GTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEV 58
Query: 239 WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL-MGSG 297
++L++Y KC +D+ + +F QM D V W ++ RE F+ +
Sbjct: 59 SKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRET-MRFFKAMHFADE 117
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT-KIA 356
+P+ TF VL C + GK +H Y+++ G + + G+ALV +Y+K G A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 357 SRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHA 416
F+ I D+VSW ++I GF++N A F L+LK T+P+ T VL C
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS- 236
Query: 417 GLVDKGL-----EYFHSIKEKHGLMHTADHYAC--VIDLLARSGRFNEAENIIDNMSIKP 469
+DK + HS + + T + C ++ R GR EA ++ M K
Sbjct: 237 --MDKNIACRSGRQIHSYVVQRSWLQT-HVFVCNSLVSFYLRVGRIEEAASLFTRMGSK- 292
Query: 470 DKFLWASLLGG 480
D W ++ G
Sbjct: 293 DLVSWNVVIAG 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 13/267 (4%)
Query: 290 FRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSK 349
FR L G G + F V+KACA + G+ +HG + ++G+ S +++++Y+K
Sbjct: 11 FRLLSGFGT--DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAK 68
Query: 350 CGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGV 409
C ++F Q+ D V W ++ G + + + F + KP +TF V
Sbjct: 69 CRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 410 LSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG-RFNEAENIIDNMSIK 468
L C G G + HS K GL ++ + A+ G F +A D ++ K
Sbjct: 129 LPLCVRLGDSYNG-KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADK 187
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVR 528
D W +++ G + + A R+ + + EP P Y T+AN+ + R
Sbjct: 188 -DVVSWNAIIAGFSENNMMADAFRSFCLMLK-EPTEP-NYATIANVLPVCASMDKNIACR 244
Query: 529 KDMEIRGIVKKPGKSWIEIKRQVHVFL 555
+I V + +SW+ Q HVF+
Sbjct: 245 SGRQIHSYVVQ--RSWL----QTHVFV 265
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 163/570 (28%), Positives = 269/570 (47%), Gaps = 71/570 (12%)
Query: 37 NNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYS--TLIAACVRHRALEQGRRVHALT 94
N FEEA L Q + VD+ P + + ++ + C +GR VH T
Sbjct: 370 NGMFEEAFGILNQ----------MQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYT 419
Query: 95 KSSNFIP-GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLG----- 148
+ + N ++D+Y KCG A+ LF RDL SWN+MI+ +++ G
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 149 ------------------------------------------WLEQARKLFDEMPR---- 162
WL++ L R
Sbjct: 480 KNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETM 539
Query: 163 ---RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
RD SWN+ ISG S G E+L F+ M + + TL ++A+ + +
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G+ HG +++ +LD + + L+ +YG+C ++ A +F + D ++ SW +I +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
+ E F LFR+L + PNE TF G+L A + G + H +++R G+ F
Sbjct: 660 NKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSG 398
+ALVD+YS CG + +VF + +W S+I +G ++A+ F EL S
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
+P++ +F+ +LSAC+H+G +D+GL Y+ ++EK G+ +H ++D+L R+G+ EA
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANA 518
I + +W +LL C HG+ +L K A LFE+EP+N + YI+LAN Y
Sbjct: 837 YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGL 896
Query: 519 GQWAEEAKVRKDMEIRGIVKKPGKSWIEIK 548
G W E ++RK +E + K PG S I+++
Sbjct: 897 GGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 188/389 (48%), Gaps = 10/389 (2%)
Query: 132 RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMM 191
+DL + + ++ Y + G L + LFDE+ +D WN+ I+ +GR A+ +F M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 192 QKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGS 251
H+ + + TL +A +++ R +H + GL D + +AL++LY K +
Sbjct: 180 -IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGEN 238
Query: 252 LDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA 311
L A +F M +D+VSW T++ +C +G + F+ + GSG + TF+ V+ A
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 312 CADHAAEHLGKEVHGYMMRVGYDPGSF--AGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
C+ LG+ +HG +++ GY P + G++++ +YSKCG+T+ A VF ++ D++
Sbjct: 299 CSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVI 358
Query: 370 SWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
S +++ GFA NG + A ++ +PD T V + S C +G H
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG-RAVHG 417
Query: 429 IKEKHGLMHTA-DHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNI 487
+ + A + VID+ + G +AE ++ + D W S++ +G
Sbjct: 418 YTVRMEMQSRALEVINSVIDMYGKCGLTTQAE-LLFKTTTHRDLVSWNSMISAFSQNG-- 474
Query: 488 ELAKRAANALFEIEPENPATYITLANIYA 516
+A N E+ E + +L+ + A
Sbjct: 475 -FTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 210/504 (41%), Gaps = 88/504 (17%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFIS--NRLLDLYAKCGSLADAQRLFDE 128
+S +I+AC L G +H L S + P +S N ++ +Y+KCG A+ +F+E
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE 351
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
+ RD+ S N ++ G+A G E+A + ++M D + A
Sbjct: 352 LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIA----------------- 394
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV-VWSALLDLYG 247
T+ S + + R G+ +HGY VR + + V ++++D+YG
Sbjct: 395 --------------TVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYG 440
Query: 248 KCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG--SGVRPNEYTF 305
KCG +A +F +D+VSW +MI ++G + +LF++++ S + + T
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+L +C + GK VH ++ ++G +F R+
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL------------------RLETMSET 542
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG-TKPDQITFVGVLSACTHAGLVDKGLE 424
DL SW S+I G A +G +L F+ + + G + D IT +G +SA + GLV +G
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG-R 601
Query: 425 YFHSIKEKH-----------------------------GLMHTAD--HYACVIDLLARSG 453
FH + K GL+ + + CVI L+++
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNK 661
Query: 454 RFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE-NPATYITLA 512
E + N+ ++P++ + LL G+ +A L + NP L
Sbjct: 662 AGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 721
Query: 513 NIYANAGQWAEEAKVRKDMEIRGI 536
++Y++ G KV ++ + I
Sbjct: 722 DMYSSCGMLETGMKVFRNSGVNSI 745
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 170/391 (43%), Gaps = 42/391 (10%)
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
LFDE+P R++ + + S R+ L F M + E+ S
Sbjct: 71 LFDELPERENRTMES------SFMFLRDVLRSFMMRTETETPRS---------------- 108
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
+H + ++ GL D S LL YG+ G L + +FD++ +KDV+ W +MI
Sbjct: 109 -------VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
++GR LF +++ G + T A + +H + G
Sbjct: 162 ALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
S +AL++LY+K N A VF + D+VSW +++ NG P ++L +F+ +
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC---VIDLLARS 452
SG + D +TF V+SAC+ + G E H + K G A H + +I + ++
Sbjct: 282 GSGQEADTVTFSCVISACSSIEELTLG-ESLHGLVIKSGYSPEA-HVSVGNSIISMYSKC 339
Query: 453 GRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENP--ATYIT 510
G AE + + + + D ++L G +G E A N + ++ P AT ++
Sbjct: 340 GDTEAAETVFEELVCR-DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVS 398
Query: 511 LANI-----YANAGQWAEEAKVRKDMEIRGI 536
+ +I ++ G+ VR +M+ R +
Sbjct: 399 ITSICGDLSFSREGRAVHGYTVRMEMQSRAL 429
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 229/467 (49%), Gaps = 38/467 (8%)
Query: 146 KLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHG--RPREALEMFRMMQKHESSNSNKFT 203
+L L AR +FD + + A ++ Y S A FR+M N F
Sbjct: 69 RLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFI 128
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVV------------------------- 238
L + + +H +L ++G L VV
Sbjct: 129 YPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEM 188
Query: 239 -------WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFR 291
W+A+L Y + G + A +F+ M ++DV SW ++ C ++G E SLFR
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 292 DLMGS-GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKC 350
++ +RPNE T VL ACA L K +H + R F ++LVDLY KC
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC 308
Query: 351 GNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK---SGTKPDQITFV 407
GN + AS VF + L +W S+I FA +G+ + A+ FE ++K + KPD ITF+
Sbjct: 309 GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
G+L+ACTH GLV KG YF + + G+ +HY C+IDLL R+GRF+EA ++ M +
Sbjct: 369 GLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKM 428
Query: 468 KPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKV 527
K D+ +W SLL C+IHG+++LA+ A L + P N +AN+Y G W E +
Sbjct: 429 KADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRA 488
Query: 528 RKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGEL 574
RK ++ + K PG S IEI +VH F D SHP+ +I+ L L
Sbjct: 489 RKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 166/332 (50%), Gaps = 8/332 (2%)
Query: 63 VDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGS-LAD 121
V RP+ +Y ++ + + VH S F + + LL YA S +
Sbjct: 121 VPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITL 180
Query: 122 AQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRP 181
A++LFDEM +R++ SW M++GYA+ G + A LF++MP RD SWNA ++ +G
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 182 REALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSA 241
EA+ +FR M S N+ T+ L+A A L+L K IH + R L D V ++
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNS 300
Query: 242 LLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE-DGRREEGFSLFRDLMG---SG 297
L+DLYGKCG+L+EA +F K + +W +MI+ CF GR EE ++F ++M +
Sbjct: 301 LVDLYGKCGNLEEASSVFKMASKKSLTAWNSMIN-CFALHGRSEEAIAVFEEMMKLNIND 359
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIA 356
++P+ TF G+L AC G+ M R G +P L+DL + G A
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEA 419
Query: 357 SRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRA 387
V + + + D W SL+ +G D A
Sbjct: 420 LEVMSTMKMKADEAIWGSLLNACKIHGHLDLA 451
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 149/323 (46%), Gaps = 23/323 (7%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYG-KCGSLDEARGIFDQMVDKDVVSWTTMI--HRC 277
K++ +++ +GL + LL + +L AR IFD+ + + ++ +
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSS 100
Query: 278 FEDGRREEGFSLFRDLMGSGV-RPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
FS FR ++ V RPN + + VLK+ ++ VH ++ + G+
Sbjct: 101 SLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLY 160
Query: 337 SFAGSALVDLY-SKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+AL+ Y S + +A ++F+++ ++VSWT+++ G+A++G A+ FE +
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM- 219
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+ D ++ +L+ACT GL + + F + + + CV+ A++G
Sbjct: 220 ---PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 456 NEAENI---IDNMSIKPDKFLWASLL---GGCRIHGNIELAKRAANALFEIEPENPAT-Y 508
A+ I + D F+ SL+ G C GN+E A+++F++ + T +
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC---GNLE----EASSVFKMASKKSLTAW 329
Query: 509 ITLANIYANAGQWAEEAKVRKDM 531
++ N +A G+ E V ++M
Sbjct: 330 NSMINCFALHGRSEEAIAVFEEM 352
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 273/541 (50%), Gaps = 49/541 (9%)
Query: 55 EAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
EAV + + R L ++++I C L+ R++H L + + + N L+
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNA 170
Y+KCG L + +F +M +R++ SW TMI+
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS---------------------------- 350
Query: 171 AISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA 230
+A+ +F M + + N+ T + A ++ G +IHG ++
Sbjct: 351 --------SNKDDAVSIFLNM-RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT 401
Query: 231 GLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLF 290
G + V ++ + LY K +L++A+ F+ + ++++SW MI ++G E +F
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 291 RDLMGSGVRPNEYTFTGVLKAC--ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYS 348
+ PNEYTF VL A A+ + G+ H +++++G + SAL+D+Y+
Sbjct: 462 LS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYA 520
Query: 349 KCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVG 408
K GN + +VFN++ + + WTS+I ++ +G + ++ F ++K PD +TF+
Sbjct: 521 KRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLS 580
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK 468
VL+AC G+VDKG E F+ + E + L + +HY+C++D+L R+GR EAE ++ +
Sbjct: 581 VLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGG 640
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVR 528
P + + S+LG CR+HGN+++ + A E++PE +Y+ + NIYA +W + A++R
Sbjct: 641 PGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIR 700
Query: 529 KDMEIRGIVKKPGKSWIEI-----KRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGY 583
K M + + K+ G SWI++ + F GD SHPK +I+ + + +M EG
Sbjct: 701 KAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGK 760
Query: 584 V 584
V
Sbjct: 761 V 761
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 210/426 (49%), Gaps = 53/426 (12%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
YST ++ CV G ++ + + + + N + +Y++ GS A+R+FDEM
Sbjct: 177 YSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS 236
Query: 131 DRDLCSWNTMIAGYAKLGWLE-QARKLFDEMPRR----DHFSWNAAISGYVSHGRPREAL 185
+D+ SWN++++G ++ G +A +F +M R DH S+ + I+
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC--------- 287
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
HE+ L+L ++IHG ++ G + V + L+
Sbjct: 288 --------HETD-------------------LKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KCG L+ + +F QM +++VVSWTTMI +++ S+F ++ GV PNE TF
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 306 TGVLKA--CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
G++ A C + E G ++HG ++ G+ G++ + LY+K + A + F I
Sbjct: 376 VGLINAVKCNEQIKE--GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD-KG 422
+++SW ++I GFAQNG AL F L + T P++ TF VL+A A + K
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIAFAEDISVKQ 492
Query: 423 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCR 482
+ H+ K GL + ++D+ A+ G +E+E + + MS K ++F+W S++
Sbjct: 493 GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSIISAYS 551
Query: 483 IHGNIE 488
HG+ E
Sbjct: 552 SHGDFE 557
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 211/448 (47%), Gaps = 49/448 (10%)
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAG 143
L++G ++H + +S F + +SN ++ +Y K G D LC
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRF-----------DNALC-------- 132
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
+F+ + D SWN +SG+ + + AL F + K + FT
Sbjct: 133 ------------IFENLVDPDVVSWNTILSGFDDN---QIALN-FVVRMKSAGVVFDAFT 176
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
S+ L+ LG ++ +V+ GL+ D VV ++ + +Y + GS AR +FD+M
Sbjct: 177 YSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS 236
Query: 264 DKDVVSWTTMIHRCFEDGRRE-EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
KD++SW +++ ++G E +FRD+M GV + +FT V+ C L +
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLAR 296
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNG 382
++HG ++ GY+ G+ L+ YSKCG + VF+Q+ ++VSWT++I +
Sbjct: 297 QIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SS 351
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
D A+ F + G P+++TFVG+++A + +GL+ H + K G +
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK-IHGLCIKTGFVSEPSVG 410
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG-NIELAKRAANALFEIE 501
I L A+ +A+ ++++ + + W +++ G +G + E K +A E
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFR-EIISWNAMISGFAQNGFSHEALKMFLSAAAETM 469
Query: 502 PENPATYITLANIYANAGQWAEEAKVRK 529
P N T+ ++ N A +AE+ V++
Sbjct: 470 P-NEYTFGSVLNAIA----FAEDISVKQ 492
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 185/401 (46%), Gaps = 17/401 (4%)
Query: 153 ARKLFDEMPRRD-HFSWNAAISGYVSHGRPREALEMFR--MMQKHESSNSNKFTLSSGLA 209
A KLFD +R+ S N +IS + P AL +F+ + + + ++ TL LA
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLC--LA 84
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS 269
A L+ G +IHG+ +G V +A++ +Y K G D A IF+ +VD DVVS
Sbjct: 85 LKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 270 WTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM 329
W T++ F+D + F + + +GV + +T++ L C LG ++ ++
Sbjct: 145 WNTILSG-FDDNQIALNFVV--RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 330 RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPD-RAL 388
+ G + G++ + +YS+ G+ + A RVF+++ D++SW SL+ G +Q G A+
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDL 448
F +++ G + D ++F V++ C H + K H + K G + ++
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDL-KLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 449 LARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATY 508
++ G +++ MS + + W +++ + + N F+ N T+
Sbjct: 321 YSKCGVLEAVKSVFHQMS-ERNVVSWTTMISSNK----DDAVSIFLNMRFDGVYPNEVTF 375
Query: 509 ITLANIYANAGQWAEEAKVRKDMEIRGIVKKP--GKSWIEI 547
+ L N Q E K+ G V +P G S+I +
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 416
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 263/507 (51%), Gaps = 13/507 (2%)
Query: 53 LKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDL 112
+++ D + H D S Y ++I +C + L + ++ FIP + LL L
Sbjct: 101 VRKVFDEMLHRDTVS---YCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLAL 157
Query: 113 YAKCGSLADAQRLF------DEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHF 166
+ GS + R+F DE + ++ Y K A +FD+M ++
Sbjct: 158 CTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEV 217
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC-LRLGKEIHG 225
SW A ISG V++ +++FR MQ+ E+ N+ TL S L A + L KEIHG
Sbjct: 218 SWTAMISGCVANQNYEMGVDLFRAMQR-ENLRPNRVTLLSVLPACVELNYGSSLVKEIHG 276
Query: 226 YLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREE 285
+ R G DE + +A + +Y +CG++ +R +F+ +DVV W++MI E G E
Sbjct: 277 FSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSE 336
Query: 286 GFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVD 345
+L + G+ N T ++ AC + VH +++ G+ G+AL+D
Sbjct: 337 VMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALID 396
Query: 346 LYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
+Y+KCG+ A VF ++ DLVSW+S+I + +G AL F+ ++K G + D +
Sbjct: 397 MYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMA 456
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
F+ +LSAC HAGLV++ F + H + T +HYAC I+LL R G+ ++A + NM
Sbjct: 457 FLAILSACNHAGLVEEAQTIFTQAGKYH-MPVTLEHYACYINLLGRFGKIDDAFEVTINM 515
Query: 466 SIKPDKFLWASLLGGCRIHGNIELA-KRAANALFEIEPENPATYITLANIYANAGQWAEE 524
+KP +W+SLL C HG +++A K AN L + EP+NPA Y+ L+ I+ +G +
Sbjct: 516 PMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAA 575
Query: 525 AKVRKDMEIRGIVKKPGKSWIEIKRQV 551
+VR+ M+ R + K G S IE + Q+
Sbjct: 576 EEVRRVMQRRKLNKCYGFSKIEPELQI 602
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 173/365 (47%), Gaps = 16/365 (4%)
Query: 130 GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFR 189
D D N++I+ YAK RK+FDEM RD S+ + I+ G EA+++ +
Sbjct: 78 ADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIK 137
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLG------KEIHGY-LVRAGLDLDEVVWSAL 242
M + F S L A+ C R+G + H LV + ++ +AL
Sbjct: 138 EMYFY------GFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTAL 191
Query: 243 LDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
+D+Y K A +FDQM K+ VSWT MI C + E G LFR + +RPN
Sbjct: 192 VDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNR 251
Query: 303 YTFTGVLKACAD-HAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
T VL AC + + L KE+HG+ R G +A + +Y +CGN ++ +F
Sbjct: 252 VTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFE 311
Query: 362 QIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
D+V W+S+I G+A+ G ++ + K G + + +T + ++SACT++ L+
Sbjct: 312 TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSF 371
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC 481
HS K G M +ID+ A+ G + A + ++ K D W+S++
Sbjct: 372 A-STVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAY 429
Query: 482 RIHGN 486
+HG+
Sbjct: 430 GLHGH 434
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 150/327 (45%), Gaps = 10/327 (3%)
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT--LSSGLAAAA--AIP 215
+ R + + G VS EAL ++++ K S +N FT L S + A A P
Sbjct: 5 LSSRLNLELGNKLKGLVSDQFYDEALRLYKL--KIHSLGTNGFTAILPSVIKACAFQQEP 62
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIH 275
L LG ++H ++AG D D VV ++L+ +Y K R +FD+M+ +D VS+ ++I+
Sbjct: 63 FL-LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIIN 121
Query: 276 RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH-AAEHLGKEVHGY-MMRVGY 333
C +DG E L +++ G P +L C ++ + + H ++
Sbjct: 122 SCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERM 181
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL 393
+ALVD+Y K + A VF+Q+ + VSWT++I G N + + F
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 394 LLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
+ + +P+++T + VL AC ++ H +HG A + + R G
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Query: 454 RFNEAENIIDNMSIKPDKFLWASLLGG 480
+ + + + ++ D +W+S++ G
Sbjct: 302 NVSLSRVLFETSKVR-DVVMWSSMISG 327
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 258/493 (52%), Gaps = 38/493 (7%)
Query: 60 LHHVDRPSPRLYSTLIA---ACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKC 116
+ +D SP L ST++ A R AL +G+ VH F + + +LD+YAK
Sbjct: 195 MRRIDGLSPNL-STIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 117 GSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYV 176
+ AR++FD +++ +W+A I GYV
Sbjct: 254 KCII-------------------------------YARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 177 SHGRPREALEMF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLD 235
+ +EA E+F +M+ + + L A L G+ +H Y V+AG LD
Sbjct: 283 ENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILD 342
Query: 236 EVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG 295
V + ++ Y K GSL +A F ++ KDV+S+ ++I C + R EE F LF ++
Sbjct: 343 LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT 402
Query: 296 SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKI 355
SG+RP+ T GVL AC+ AA G HGY + GY + +AL+D+Y+KCG +
Sbjct: 403 SGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDV 462
Query: 356 ASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTH 415
A RVF+ + + D+VSW +++ GF +G AL F + ++G PD++T + +LSAC+H
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSH 522
Query: 416 AGLVDKGLEYFHSI-KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLW 474
+GLVD+G + F+S+ + ++ DHY C+ DLLAR+G +EA + ++ M +PD +
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVL 582
Query: 475 ASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIR 534
+LL C + N EL + + + E + + L+N Y+ A +W + A++R + R
Sbjct: 583 GTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKR 641
Query: 535 GIVKKPGKSWIEI 547
G++K PG SW+++
Sbjct: 642 GLLKTPGYSWVDV 654
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 221/488 (45%), Gaps = 50/488 (10%)
Query: 34 AKTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHAL 93
A +N+F E K L +L+ RP+ Y ++ AC RA++ G+ +H+
Sbjct: 77 AYASNDFAE--------KALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQA 153
S+F +++ L+D YAKCG LE A
Sbjct: 129 VNCSDFATDMYVCTALVDFYAKCGE-------------------------------LEMA 157
Query: 154 RKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAA 213
K+FDEMP+RD +WNA ISG+ H + + +F M++ + + N T+ A
Sbjct: 158 IKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGR 217
Query: 214 IPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTM 273
LR GK +HGY R G D VV + +LD+Y K + AR +FD K+ V+W+ M
Sbjct: 218 AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 274 IHRCFEDGR-REEGFSLFRDLMGSGVRPNEYTFTG-VLKACADHAAEHLGKEVHGYMMRV 331
I E+ +E G F+ L+ V G +L CA G+ VH Y ++
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF 391
G+ + ++ Y+K G+ A R F++I D++S+ SLI G N +P+ + F
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 392 ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 451
+ SG +PD T +GVL+AC+H + G H HG ++D+ +
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHG-SSCHGYCVVHGYAVNTSICNALMDMYTK 456
Query: 452 SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE---NPATY 508
G+ + A+ + D M K D W ++L G IHG L K A +LF E NP
Sbjct: 457 CGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIHG---LGKEAL-SLFNSMQETGVNPDEV 511
Query: 509 ITLANIYA 516
LA + A
Sbjct: 512 TLLAILSA 519
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 184/426 (43%), Gaps = 50/426 (11%)
Query: 70 LYSTLIAACVRHRALEQGRRVHA-LTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDE 128
++ +L+ C+R R L G+ +H L K S + + L LYA C +
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEV--------- 51
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP--RRDHFSWNAAISGYVSHGRPREALE 186
E AR +FDE+P R + +W+ I Y S+ +AL+
Sbjct: 52 ----------------------ELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALD 89
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
++ M + K+T L A A + + GK IH ++ + D V +AL+D Y
Sbjct: 90 LYYKML-NSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFY 148
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMI-----HRCFEDGRREEGFSLFRDLMG-SGVRP 300
KCG L+ A +FD+M +D+V+W MI H C D LF D+ G+ P
Sbjct: 149 AKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTD-----VIGLFLDMRRIDGLSP 203
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVF 360
N T G+ A A GK VHGY R+G+ + ++D+Y+K A RVF
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 361 NQIPRPDLVSWTSLIGGFAQNGQPDRALH-FFELLLKSGTKPDQITFVG-VLSACTHAGL 418
+ + + V+W+++IGG+ +N A FF++L+ +G +L C G
Sbjct: 264 DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGD 323
Query: 419 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLL 478
+ G H K G + +I A+ G +A + +K D + SL+
Sbjct: 324 LSGG-RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLI 381
Query: 479 GGCRIH 484
GC ++
Sbjct: 382 TGCVVN 387
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 150/298 (50%), Gaps = 9/298 (3%)
Query: 217 LRLGKEIHGYLVRAGLDLDE-VVWSALLDLYGKCGSLDEARGIFDQMVDKDV--VSWTTM 273
L LG+ IH +L++ L L V L LY C ++ AR +FD++ + ++W M
Sbjct: 15 LVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLM 74
Query: 274 IHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
I + E+ L+ ++ SGVRP +YT+ VLKACA A GK +H ++ +
Sbjct: 75 IRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDF 134
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQN-GQPDRALHFFE 392
+ +ALVD Y+KCG ++A +VF+++P+ D+V+W ++I GF+ + D F +
Sbjct: 135 ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLD 194
Query: 393 LLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARS 452
+ G P+ T VG+ A AG + +G + H + G + ++D+ A+S
Sbjct: 195 MRRIDGLSPNLSTIVGMFPALGRAGALREG-KAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 453 GRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYIT 510
A + D + K ++ W++++GG + E+ K A F++ + +T
Sbjct: 254 KCIIYARRVFD-LDFKKNEVTWSAMIGG---YVENEMIKEAGEVFFQMLVNDNVAMVT 307
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 174/586 (29%), Positives = 293/586 (50%), Gaps = 69/586 (11%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIP-- 101
+ ALC R ++AV+L + + ++TL+ +R+ +E+ ++V S + +
Sbjct: 145 LTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWN 204
Query: 102 -------------------------GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCS 136
+ ++ Y + G + +A RLF EM +R++ S
Sbjct: 205 AMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS 264
Query: 137 WNTMIAGYAKLGWLEQARKLFDEMPRR-DHFSWNAAISGYVSHGRPREALEMFRM-MQKH 194
W MI+G+A +A LF EM + D S N +++ +E R+ Q H
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH 324
Query: 195 ESSNSNKFTL----------------SSGLAAAA------AIPCLRLGKEIHGYLVRAGL 232
SN + SSGL A+A + I+ YL L
Sbjct: 325 AQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDL 384
Query: 233 DL------------DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
+ D+V W++++D Y + G + A G+F ++ DKD V+WT MI ++
Sbjct: 385 ERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG--YDPGSF 338
E SL D++ G++P T++ +L + + GK +H + + YDP
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
++LV +Y+KCG + A +F ++ + D VSW S+I G + +G D+AL+ F+ +L SG
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
KP+ +TF+GVLSAC+H+GL+ +GLE F ++KE + + DHY +IDLL R+G+ EA
Sbjct: 565 KKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEA 624
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIE----LAKRAANALFEIEPENPATYITLANI 514
E I + PD ++ +LLG C ++ + +A+RAA L E++P N ++ L N+
Sbjct: 625 EEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNV 684
Query: 515 YANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTS 560
YA G+ E ++RK+M I+G+ K PG SW+ + + +VFL GD S
Sbjct: 685 YAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKS 730
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 195/442 (44%), Gaps = 56/442 (12%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+++L++ + L++ R + + N I N +L Y KC + +A LF EM
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPERN----IVTCNAMLTGYVKCRRMNEAWTLFREM- 134
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
+++ SW M+ G E A +LFDEMP R+ SWN ++G + +G +A ++F
Sbjct: 135 PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDA 194
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL--------DLDE---VVW 239
M + + N I GY+ G+ D+ E V W
Sbjct: 195 MPSRDVVSWNAM--------------------IKGYIENDGMEEAKLLFGDMSEKNVVTW 234
Query: 240 SALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG--SG 297
++++ Y + G + EA +F +M ++++VSWT MI + E LF ++
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 298 VRPNEYTFTGVLKACADHAAE--HLGKEVHGYMMRVGYDPGSFAG---SALVDLYSKCGN 352
V PN T + AC E LG+++H ++ G++ G +LV +Y+ G
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 353 TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
A + N+ DL S +I + +NG +RA FE + + D++++ ++
Sbjct: 355 IASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFE---RVKSLHDKVSWTSMIDG 409
Query: 413 CTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM---SIKP 469
AG V + F + +K G+ T +I L ++ F EA +++ +M +KP
Sbjct: 410 YLEAGDVSRAFGLFQKLHDKDGVTWTV-----MISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 470 DKFLWASLLGGCRIHGNIELAK 491
++ LL N++ K
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGK 486
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 191/454 (42%), Gaps = 91/454 (20%)
Query: 117 GSLADAQRLFDEMGDRD----LCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAI 172
G L A+ L D++ R + W ++++ YAK G+L++AR LF+ MP R+ + NA +
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 173 SGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL 232
+GYV R EA +FR M K+ S + L++ + + L E+
Sbjct: 116 TGYVKCRRMNEAWTLFREMPKNVVSWT--VMLTALCDDGRSEDAVELFDEMP-------- 165
Query: 233 DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
+ + V W+ L+ + G +++A+ +FD M +DVVSW MI E+ EE LF D
Sbjct: 166 ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGD 225
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
+ N T+T + V+G Y + G+
Sbjct: 226 M----SEKNVVTWTSM---------------VYG--------------------YCRYGD 246
Query: 353 TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK--SGTKPDQITFVGVL 410
+ A R+F ++P ++VSWT++I GFA N AL F + K P+ T + +
Sbjct: 247 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLA 306
Query: 411 SAC-------------THAGLVDKGLEYF-HSIKEKHGLMH-----------------TA 439
AC HA ++ G E H + L+H +
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF 366
Query: 440 DHYAC--VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL 497
D +C +I+ ++G AE + + + DK W S++ G G++ RA
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDV---SRAFGLF 423
Query: 498 FEIEPENPATYITLANIYANAGQWAEEAKVRKDM 531
++ ++ T+ + + +AE A + DM
Sbjct: 424 QKLHDKDGVTWTVMISGLVQNELFAEAASLLSDM 457
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 239/475 (50%), Gaps = 40/475 (8%)
Query: 74 LIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRD 133
LI C ++ G ++H L F S L+ Y KCG + +A+R+F+ + DRD
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 134 LCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQK 193
L WN ++ S YV +G EA + ++M
Sbjct: 208 LVLWNALV-------------------------------SSYVLNGMIDEAFGLLKLMGS 236
Query: 194 HESS-NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
++ + FT SS L+A + GK+IH L + D V +ALL++Y K L
Sbjct: 237 DKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHL 292
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
+AR F+ MV ++VVSW MI ++G E LF ++ ++P+E TF VL +C
Sbjct: 293 SDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSC 352
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
A +A K+V + + G ++L+ YS+ GN A F+ I PDLVSWT
Sbjct: 353 AKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWT 412
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
S+IG A +G + +L FE +L+ +PD+ITF+ VLSAC+H GLV +GL F + E
Sbjct: 413 SVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF 471
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKR 492
+ + +HY C+IDLL R+G +EA +++++M +P A+ GGC IH E K
Sbjct: 472 YKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKW 531
Query: 493 AANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV--KKPGKSWI 545
A L EIEP P Y L+N Y + G W + A +RK E R K PG SW+
Sbjct: 532 GAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKR-ERRNCYNPKTPGCSWL 585
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 213/461 (46%), Gaps = 57/461 (12%)
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAG 143
L ++ H +F+ N+LL Y K DA +LFDEM R++ +WN +I G
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 144 Y----------AKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQK 193
A LG+ +R LF ++ DH S+ + + R+
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVS-LDHVSF----------------MGLIRLCT- 153
Query: 194 HESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLD 253
+S+N ++ G ++H +V+ GL+ ++L+ YGKCG +
Sbjct: 154 -DSTN------------------MKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIV 194
Query: 254 EARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG---VRPNEYTFTGVLK 310
EAR +F+ ++D+D+V W ++ +G +E F L + LMGS R + +TF+ +L
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK-LMGSDKNRFRGDYFTFSSLLS 253
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
AC GK++H + +V Y +AL+++Y+K + A F + ++VS
Sbjct: 254 ACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVS 309
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK 430
W ++I GFAQNG+ A+ F +L +PD++TF VLS+C + + ++ ++
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWE-IKQVQAMV 368
Query: 431 EKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
K G +I +R+G +EA ++ +PD W S++G HG E +
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEES 427
Query: 491 KRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDM 531
+ ++ + + T++ + + ++ G E + K M
Sbjct: 428 LQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRM 468
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 161/332 (48%), Gaps = 22/332 (6%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE- 279
K+ HG++V+ G+ + + LL Y K D+A +FD+M +++V+W +IH +
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 280 DG----RREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDP 335
DG R GF ++ + V + +F G+++ C D G ++H M++ G +
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
F ++LV Y KCG A RVF + DLV W +L+ + NG D A +L+
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 396 --KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
K+ + D TF +LSAC +++G + H+I K ++++ A+S
Sbjct: 236 SDKNRFRGDYFTFSSLLSACR----IEQG-KQIHAILFKVSYQFDIPVATALLNMYAKSN 290
Query: 454 RFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALF--EIEPENPATYITL 511
++A ++M ++ + W +++ G +G A R + ++P+ +T
Sbjct: 291 HLSDARECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE----LTF 345
Query: 512 ANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
A++ ++ +++ +++ +++ +V K G +
Sbjct: 346 ASVLSSCAKFSAIWEIK---QVQAMVTKKGSA 374
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 39/309 (12%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+S+L++AC +EQG+++HA+ ++ I ++ LL++YAK L+DA+ F+ M
Sbjct: 248 FSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMV 303
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
R++ SWN MI G+A+ +G REA+ +F
Sbjct: 304 VRNVVSWNAMIVGFAQ-------------------------------NGEGREAMRLFGQ 332
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M E+ ++ T +S L++ A + K++ + + G V ++L+ Y + G
Sbjct: 333 MLL-ENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNG 391
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
+L EA F + + D+VSWT++I G EE +F ++ ++P++ TF VL
Sbjct: 392 NLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLS 450
Query: 311 ACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDL 368
AC+ G M + + L+DL + G AS V N +P P
Sbjct: 451 ACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPST 510
Query: 369 VSWTSLIGG 377
+ + GG
Sbjct: 511 HALAAFTGG 519
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 91/201 (45%), Gaps = 38/201 (18%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P +++++++C + A+ + ++V A+ + ++N L+ Y++ G+L++A
Sbjct: 339 QPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALL 398
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR---DHFSWNAAISGYVSHGRP 181
F + + DL SW ++I A G+ E++ ++F+ M ++ D ++ +S G
Sbjct: 399 CFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLV 458
Query: 182 REALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSA 241
+E L F+ M + Y + A ++ ++
Sbjct: 459 QEGLRCFKRMTEF-------------------------------YKIEA----EDEHYTC 483
Query: 242 LLDLYGKCGSLDEARGIFDQM 262
L+DL G+ G +DEA + + M
Sbjct: 484 LIDLLGRAGFIDEASDVLNSM 504
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/607 (28%), Positives = 282/607 (46%), Gaps = 109/607 (17%)
Query: 49 QQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIF 104
Q + +EA+ L + + P+ ST ++A +E+G++ HA+ + G+
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA----IVNGME 306
Query: 105 ISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRD 164
+ N L +++ Y K+G +E A +FD M +D
Sbjct: 307 LDNIL---------------------------GTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 165 HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
+WN ISGYV G +A+ M ++M + E + TL++ ++AAA L+LGKE+
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLM-RLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 225 GY-----------LVRAGLDL--------------------DEVVWSALLDLYGKCG--- 250
Y L +D+ D ++W+ LL Y + G
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 251 --------------------------------SLDEARGIFDQM----VDKDVVSWTTMI 274
+DEA+ +F QM + +++SWTTM+
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR-VGY 333
+ ++G EE R + SG+RPN ++ T L ACA A+ H+G+ +HGY++R + +
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL 393
++LVD+Y+KCG+ A +VF +L ++I +A G A+ +
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 394 LLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
L G KPD IT VLSAC HAG +++ +E F I K + +HY ++DLLA +G
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 454 RFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLAN 513
+A +I+ M KPD + SL+ C EL + L E EPEN Y+T++N
Sbjct: 699 ETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 514 IYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQ--VHVFLVGDTSHPKIRDIHEFL 571
YA G W E K+R+ M+ +G+ KKPG SWI+I + VHVF+ D +H +I +I L
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Query: 572 GELSKKM 578
L M
Sbjct: 819 ALLLYDM 825
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 237/504 (47%), Gaps = 47/504 (9%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHA-LTKSSN 98
+++LC+ +KEA+ L+ +D R P +Y ++ CV R L G+++HA + K+ +
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 99 FIP-GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
F +I +L+ YAKC +L A+ LF ++ R++ SW +I ++G E A F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
EM + F N F + + A A+
Sbjct: 162 VEMLENEIFPDN--------------------------------FVVPNVCKACGALKWS 189
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
R G+ +HGY+V++GL+ V S+L D+YGKCG LD+A +FD++ D++ V+W ++
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY 249
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
++G+ EE LF D+ GV P T + L A A+ GK+ H + G + +
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
G++L++ Y K G + A VF+++ D+V+W +I G+ Q G + A++ +L+
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
K D +T ++SA + G E +H + V+D+ A+ G +
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKE-VQCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 458 AENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIE----PENPATYITLAN 513
A+ + D+ +++ D LW +LL G L+ A + ++ P N T+ +
Sbjct: 429 AKKVFDS-TVEKDLILWNTLLAAYAESG---LSGEALRLFYGMQLEGVPPNVITWNLIIL 484
Query: 514 IYANAGQWAEEAKVRKDMEIRGIV 537
GQ E + M+ GI+
Sbjct: 485 SLLRNGQVDEAKDMFLQMQSSGII 508
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 15/267 (5%)
Query: 269 SWTTMIHRC---FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
S T+ HR ++G +E SL ++ +R + +L+ C GK++H
Sbjct: 34 SSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIH 93
Query: 326 GYMMRVG--YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ 383
+++ G Y + + LV Y+KC +IA +F+++ ++ SW ++IG + G
Sbjct: 94 ARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGL 153
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
+ AL F +L++ PD V AC G H K GL +
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG-RGVHGYVVKSGLEDCVFVAS 212
Query: 444 CVIDLLARSGRFNEAENIIDNMSIKPDK--FLWASLLGGCRIHGNIELAKRAANALFE-- 499
+ D+ + G ++A + D + PD+ W +L+ G +G E A R + + +
Sbjct: 213 SLADMYGKCGVLDDASKVFDEI---PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 500 IEPENPATYITLANIYANAGQWAEEAK 526
+EP T T + AN G EE K
Sbjct: 270 VEPTR-VTVSTCLSASANMGG-VEEGK 294
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHA-LTKSSN 98
+N + Q +EA+ L + RP+ + ++AC +L GR +H + ++
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQ 577
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD 158
+ I L+D+YAKCG + A+++F +L N MI+ YA G L++A L+
Sbjct: 578 HSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYR 637
Query: 159 EMP----RRDHFSWNAAISGYVSHGRPREALEMF 188
+ + D+ + +S G +A+E+F
Sbjct: 638 SLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 244/462 (52%), Gaps = 30/462 (6%)
Query: 88 RRVHALTKSSNFIPGIFISNR---LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGY 144
R H +T SS+ + + +R L L + C SLA +R+ ++
Sbjct: 26 RLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRS------------ 73
Query: 145 AKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTL 204
++ D+ P F WN + Y+ H P +A++++ M + + ++++L
Sbjct: 74 ----------RILDQYPIA--FLWNNIMRSYIRHESPLDAIQVYLGMVR-STVLPDRYSL 120
Query: 205 SSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD 264
+ AA I LGKE+H VR G DE S + LY K G + AR +FD+ +
Sbjct: 121 PIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPE 180
Query: 265 KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEV 324
+ + SW +I GR E +F D+ SG+ P+++T V +C L ++
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQL 240
Query: 325 HGYMMRVGYDPGS--FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNG 382
H +++ + S ++L+D+Y KCG +AS +F ++ + ++VSW+S+I G+A NG
Sbjct: 241 HKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANG 300
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
AL F + + G +P++ITFVGVLSAC H GLV++G YF +K + L HY
Sbjct: 301 NTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHY 360
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP 502
C++DLL+R G+ EA+ +++ M +KP+ +W L+GGC G++E+A+ A + E+EP
Sbjct: 361 GCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEP 420
Query: 503 ENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
N Y+ LAN+YA G W + +VRK M+ + + K P S+
Sbjct: 421 WNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 158/327 (48%), Gaps = 40/327 (12%)
Query: 68 PRLYS--TLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P YS +I A V+ G+ +H++ F+ F + + LY K G +A+++
Sbjct: 115 PDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKV 174
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FDE +R L SWN +I G L A GR EA+
Sbjct: 175 FDENPERKLGSWNAIIGG------LNHA-------------------------GRANEAV 203
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD--LDEVVWSALL 243
EMF M K + FT+ S A+ + L L ++H +++A + D ++ ++L+
Sbjct: 204 EMFVDM-KRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLI 262
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
D+YGKCG +D A IF++M ++VVSW++MI +G E FR + GVRPN+
Sbjct: 263 DMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKI 322
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGY--DPGSFAGSALVDLYSKCGNTKIASRVFN 361
TF GVL AC GK MM+ + +PG +VDL S+ G K A +V
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 362 QIP-RPDLVSWTSLIGGFAQNGQPDRA 387
++P +P+++ W L+GG + G + A
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 169/572 (29%), Positives = 284/572 (49%), Gaps = 66/572 (11%)
Query: 59 LLHHVDRPSPRLYSTLIAAC--------------VRHRALEQGRRVHALTKSSNFIPGIF 104
L+ P+ +Y+T+I+A +RHR + L K+S+F+ +
Sbjct: 91 FLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK 150
Query: 105 ISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRD 164
+ + + + C SL + WN+++ Y +LG A K+F MP D
Sbjct: 151 QIHCHI-IVSGCLSLGNYL-------------WNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 165 HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
S+N I GY G EAL+++ M + +++T+ S L + +RLGK +H
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKMVS-DGIEPDEYTVLSLLVCCGHLSDIRLGKGVH 255
Query: 225 GYLVRAG--LDLDEVVWSALLDLYGKC-------------------------------GS 251
G++ R G + ++ +ALLD+Y KC G
Sbjct: 256 GWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGD 315
Query: 252 LDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGF-SLFRDL-MGSGVRPNEYTFTGVL 309
++ A+ +FDQM +D+VSW +++ + G + LF ++ + V+P+ T ++
Sbjct: 316 MEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLI 375
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
A++ G+ VHG ++R+ +F SAL+D+Y KCG + A VF D+
Sbjct: 376 SGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVA 435
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
WTS+I G A +G +AL F + + G P+ +T + VL+AC+H+GLV++GL F+ +
Sbjct: 436 LWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM 495
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIID-NMSIKPDKFLWASLLGGCRIHGNIE 488
K+K G +HY ++DLL R+GR EA++I+ M ++P + +W S+L CR +IE
Sbjct: 496 KDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIE 555
Query: 489 LAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIK 548
A+ A L ++EPE Y+ L+NIYA G+W K R+ ME RG+ K G S +
Sbjct: 556 TAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGV 615
Query: 549 RQVHVFLVGD-TSHPKIRDIHEFLGELSKKMK 579
+H F+ + +HP+ +I L L +MK
Sbjct: 616 EGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 180/404 (44%), Gaps = 46/404 (11%)
Query: 150 LEQARKLF-DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGL 208
L+ A+ LF + P + F +N IS S E ++ M +H S + + L
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQ----TFL 137
Query: 209 AAAAAIPCLRLGKEIHGYLVRAG-LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDV 267
A L K+IH +++ +G L L +W++L+ Y + G+ A +F +M DV
Sbjct: 138 YLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDV 197
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
S+ MI + G E L+ ++ G+ P+EYT +L C + LGK VHG+
Sbjct: 198 SSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW 257
Query: 328 MMRVG--YDPGSFAGSALVDLYSKCGNTKIASR--------------------------- 358
+ R G Y +AL+D+Y KC + +A R
Sbjct: 258 IERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDME 317
Query: 359 ----VFNQIPRPDLVSWTSLIGGFAQNGQPDRALH--FFELLLKSGTKPDQITFVGVLSA 412
VF+Q+P+ DLVSW SL+ G+++ G R + F+E+ + KPD++T V ++S
Sbjct: 318 AAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISG 377
Query: 413 CTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKF 472
+ G + G + H + + L A + +ID+ + G A + + K D
Sbjct: 378 AANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK-DVA 435
Query: 473 LWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYA 516
LW S++ G HGN + A + + E E P LA + A
Sbjct: 436 LWTSMITGLAFHGNGQQALQLFGRMQE-EGVTPNNVTLLAVLTA 478
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 240/456 (52%), Gaps = 36/456 (7%)
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLR--LGKEIH 224
SW + I+ +GR EA + F M N T + L+ LG +H
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTL-AGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 225 GYLVRAGLDLDEVV--------------------------------WSALLDLYGKCGSL 252
GY + GLD + V+ W+ ++D Y + G +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
D A +FD+M ++D++SWT MI+ + G +EE FR++ SGV+P+ L AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
+ A G VH Y++ + ++L+DLY +CG + A +VF + + +VSW
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
S+I GFA NG +L +F + + G KPD +TF G L+AC+H GLV++GL YF +K
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG-NIELAK 491
+ + +HY C++DL +R+GR +A ++ +M +KP++ + SLL C HG NI LA+
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 492 RAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQV 551
R L ++ ++ + Y+ L+N+YA G+W +K+R+ M+ G+ K+PG S IEI +
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 552 HVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
HVF+ GD +H + I E L +S ++ +G V +T
Sbjct: 457 HVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 13/288 (4%)
Query: 103 IFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPR 162
+ + ++ +Y+K G A+ +FD M D++ +WNTMI GY + G ++ A K+FD+MP
Sbjct: 109 VMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPE 168
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
RD SW A I+G+V G EAL FR MQ + + + L A + L G
Sbjct: 169 RDLISWTAMINGFVKKGYQEEALLWFREMQI-SGVKPDYVAIIAALNACTNLGALSFGLW 227
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
+H Y++ + V ++L+DLY +CG ++ AR +F M + VVSW ++I +G
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY----MMRVGY--DPG 336
E FR + G +P+ TFTG L AC+ H+G G +M+ Y P
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACS-----HVGLVEEGLRYFQIMKCDYRISPR 342
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQ 383
LVDLYS+ G + A ++ +P +P+ V SL+ + +G
Sbjct: 343 IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 120/261 (45%), Gaps = 36/261 (13%)
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACAD--HAA 317
+Q + VSWT+ I+ +GR E F D+ +GV PN TF +L C D +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 318 EHLGKEVHGYMMRVGYDPG-SFAGSALVDLYSKCG--------------------NTKI- 355
E LG +HGY ++G D G+A++ +YSK G NT I
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 356 ----------ASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
A+++F+++P DL+SWT++I GF + G + AL +F + SG KPD +
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
+ L+ACT+ G + GL + H + +IDL R G A + NM
Sbjct: 209 IIAALNACTNLGALSFGL-WVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 466 SIKPDKFLWASLLGGCRIHGN 486
K W S++ G +GN
Sbjct: 268 E-KRTVVSWNSVIVGFAANGN 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 71 YSTLIAA---CVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFD 127
Y +IAA C AL G VH S +F + +SN L+DLY +CG + A+++F
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 128 EMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPRE 183
M R + SWN++I G+A G ++ F +M + D ++ A++ G E
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 184 ALEMFRMMQ 192
L F++M+
Sbjct: 326 GLRYFQIMK 334
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 203/367 (55%)
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
GK IH + G L+E + LL LY G L A +F + +D++ W MI +
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
G +EG ++ D+ + + P++YTF V +AC+ GK H M++
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
SALVD+Y KC + RVF+Q+ ++++WTSLI G+ +G+ L FE + + G
Sbjct: 247 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC 306
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
+P+ +TF+ VL+AC H GLVDKG E+F+S+K +G+ HYA ++D L R+GR EA
Sbjct: 307 RPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAY 366
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAG 519
+ K +W SLLG CRIHGN++L + AA E++P N Y+ AN YA+ G
Sbjct: 367 EFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCG 426
Query: 520 QWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMK 579
+KVR+ ME G+ K PG S IE++ +VH F+ DTSH I++ + E++
Sbjct: 427 LREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFM 486
Query: 580 EEGYVPD 586
+ Y PD
Sbjct: 487 DIDYYPD 493
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 37/347 (10%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVD-RPSPRLYSTLIAACVRHRALEQGRRVHAL 93
+ ++ + LC RLKEAV LL + P Y+ L+ C + + +G+R+HA
Sbjct: 74 RKTEKLDKTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQ 133
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQA 153
F ++ +LL LYA G L + A
Sbjct: 134 MFVVGFALNEYLKVKLLILYALSGDL-------------------------------QTA 162
Query: 154 RKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAA 213
LF + RD WNA ISGYV G +E L ++ M+++ +++T +S A +A
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV-PDQYTFASVFRACSA 221
Query: 214 IPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTM 273
+ L GK H +++ + + +V SAL+D+Y KC S + +FDQ+ ++V++WT++
Sbjct: 222 LDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSL 281
Query: 274 IHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR--V 331
I G+ E F + G RPN TF VL AC G E H Y M+
Sbjct: 282 ISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDY 340
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
G +P +A+VD + G + A + P + W SL+G
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 8/241 (3%)
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
GR +E L L SG++ T+ +L+ C GK +H M VG+ +
Sbjct: 90 GRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLK 146
Query: 341 SALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTK 400
L+ LY+ G+ + A +F + DL+ W ++I G+ Q G L + + ++
Sbjct: 147 VKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 206
Query: 401 PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAEN 460
PDQ TF V AC+ ++ G + H++ K + + ++D+ + F++
Sbjct: 207 PDQYTFASVFRACSALDRLEHG-KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 461 IIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYANA 518
+ D +S + + W SL+ G HG + + + E P NP T++ + +
Sbjct: 266 VFDQLSTR-NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRP-NPVTFLVVLTACNHG 323
Query: 519 G 519
G
Sbjct: 324 G 324
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 255/469 (54%), Gaps = 39/469 (8%)
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLA 209
+ A K+FDE+P D S A I +V R EA + F+ + N+FT + +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL-GIRPNEFTFGTVIG 101
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ-------- 261
++ ++LGK++H Y ++ GL + V SA+L+ Y K +L +AR FD
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 262 -----------------------MVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV 298
M ++ VV+W +I + GR EE + F D++ GV
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 299 R-PNEYTFTGVLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIA 356
PNE TF + A ++ A+ GK +H ++ +G F ++L+ YSKCGN + +
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 357 SRVFNQIP--RPDLVSWTSLIGGFAQNGQPDRALHFFELLLK-SGTKPDQITFVGVLSAC 413
FN++ + ++VSW S+I G+A NG+ + A+ FE ++K + +P+ +T +GVL AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 414 THAGLVDKGLEYFHSIKEKHG--LMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDK 471
HAGL+ +G YF+ + + +HYAC++D+L+RSGRF EAE +I +M + P
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 472 FLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDM 531
W +LLGGC+IH N LAK AA+ + E++P + ++Y+ L+N Y+ W + +R+ M
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKM 461
Query: 532 EIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKE 580
+ G+ + G SWIE++ Q+ VF+ D ++ +++ L +S+ ++E
Sbjct: 462 KETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 18/326 (5%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP+ + T+I + R ++ G+++H +F+ + +L+ Y K +L DA+R
Sbjct: 90 RPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARR 149
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
FD+ D ++ S +I+GY K E+A LF MP R +WNA I G+ GR EA
Sbjct: 150 CFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEA 209
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR-AGLDLDEVVWSALL 243
+ F M + N+ T + A + I GK IH ++ G + VW++L+
Sbjct: 210 VNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLI 269
Query: 244 DLYGKCGSLDEARGIFDQMVD--KDVVSWTTMIHRCFEDGRREEGFSLFRDLM-GSGVRP 300
Y KCG+++++ F+++ + +++VSW +MI +GR EE ++F ++ + +RP
Sbjct: 270 SFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRP 329
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMM----RVGYDPGSFAG----SALVDLYSKCGN 352
N T GVL AC H G GYM YD + + +VD+ S+ G
Sbjct: 330 NNVTILGVLFAC-----NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGR 384
Query: 353 TKIASRVFNQIP-RPDLVSWTSLIGG 377
K A + +P P + W +L+GG
Sbjct: 385 FKEAEELIKSMPLDPGIGFWKALLGG 410
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 259/488 (53%), Gaps = 43/488 (8%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP+ + +++ +C G +VH L + + +SN + +Y+
Sbjct: 288 RPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSS--------- 335
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
F++ G A K+F+ + +D +WN IS Y + A
Sbjct: 336 -FEDFG---------------------AAHKVFESLEEKDLVTWNTMISSYNQAKLGKSA 373
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
+ +++ M ++FT S LA + + L + + +++ GL + +AL+
Sbjct: 374 MSVYKRMHII-GVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALIS 429
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVR--PNE 302
Y K G +++A +F++ + K+++SW +I + +G EG F L+ S VR P+
Sbjct: 430 AYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDA 489
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
YT + +L C ++ LG + H Y++R G + G+AL+++YS+CG + + VFNQ
Sbjct: 490 YTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ 549
Query: 363 IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG-TKPDQITFVGVLSACTHAGLVDK 421
+ D+VSW SLI ++++G+ + A++ ++ + G PD TF VLSAC+HAGLV++
Sbjct: 550 MSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEE 609
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI--IDNMSIKPDKFLWASLLG 479
GLE F+S+ E HG++ DH++C++DLL R+G +EAE++ I +I +W +L
Sbjct: 610 GLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFS 669
Query: 480 GCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKK 539
C HG+++L K A L E E ++P+ Y+ L+NIYA AG W E + R+ + + G +K+
Sbjct: 670 ACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQ 729
Query: 540 PGKSWIEI 547
G SW+ +
Sbjct: 730 RGCSWMRL 737
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 227/454 (50%), Gaps = 27/454 (5%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDRPS---PRLYSTLIA-ACVRH-RALEQGRRVHAL 93
N + L + + A+ L V R + P YS +A RH R G +VH
Sbjct: 23 NLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCY 82
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQA 153
S + +SN LL LY + G+LA ++ FDE+ + D+ SW T+++ KLG +E A
Sbjct: 83 AIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYA 142
Query: 154 RKLFDEMPRRDHFS-WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
++FD+MP RD + WNA I+G G ++E+FR M K +KF ++ L +
Sbjct: 143 FEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKL-GVRHDKFGFATIL-SMC 200
Query: 213 AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ--MVDKDVVSW 270
L GK++H +++AG + V +AL+ +Y C + +A +F++ + +D V++
Sbjct: 201 DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTF 260
Query: 271 TTMIHRCFEDG----RREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
+I DG +R+E +FR ++ + +RP + TF V+ +C+ A +G +VHG
Sbjct: 261 NVVI-----DGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHG 312
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
++ GY+ + +A + +YS + A +VF + DLV+W ++I + Q
Sbjct: 313 LAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS 372
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
A+ ++ + G KPD+ TF +L+ + LE + K GL + +I
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLATSLDLDV----LEMVQACIIKFGLSSKIEISNALI 428
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
+++G+ +A+ + + S++ + W +++ G
Sbjct: 429 SAYSKNGQIEKADLLFER-SLRKNLISWNAIISG 461
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 238/432 (55%), Gaps = 9/432 (2%)
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
A +FD + + F ++ I +P L F +M K E + L+ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 213 AIPC--LRLGKEIHGYLVRAGLDL-DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS 269
+ +GK+IH ++V+ G+ L D V + +L +Y + L +AR +FD++ DVV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 270 WTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM 329
W +++ G EG +FR+++ G+ P+E++ T L ACA A GK +H ++
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 330 RVGY-DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
+ + + F G+ALVD+Y+KCG + A VF ++ R ++ SW +LIGG+A G +A+
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 389 HFFELLLKS-GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 447
E L + G KPD + +GVL+AC H G +++G +++ ++ + +HY+C++D
Sbjct: 306 TCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVD 365
Query: 448 LLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP----E 503
L+ R+GR ++A N+I+ M +KP +W +LL GCR H N+EL + A L ++E E
Sbjct: 366 LMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEE 425
Query: 504 NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPK 563
A + L+NIY + + E +KVR +E RG+ K PG S +E+ V F+ GD SHP
Sbjct: 426 EEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPN 485
Query: 564 IRDIHEFLGELS 575
+ IH + LS
Sbjct: 486 LLQIHTVIHLLS 497
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 147/316 (46%), Gaps = 35/316 (11%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
PS + LI AC++ G+++H + G+F+S D + + G L R+
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKN----GVFLS----DSHVQTGVL----RI 161
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
+ E D+ L ARK+FDE+P+ D W+ ++GYV G E L
Sbjct: 162 YVE--DK----------------LLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAG-LDLDEVVWSALLD 244
E+FR M + ++F++++ L A A + L GK IH ++ + ++ D V +AL+D
Sbjct: 204 EVFREMLV-KGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVD 262
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL-MGSGVRPNEY 303
+Y KCG ++ A +F ++ ++V SW +I G ++ + L G++P+
Sbjct: 263 MYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSV 322
Query: 304 TFTGVLKACADHAAEHLGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
GVL ACA G+ + M R P S +VDL + G A + +
Sbjct: 323 VLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEK 382
Query: 363 IPRPDLVS-WTSLIGG 377
+P L S W +L+ G
Sbjct: 383 MPMKPLASVWGALLNG 398
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 56/243 (23%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPG-IFISNRLLDLYAKCGSLADAQR 124
P +T + AC + AL QG+ +H K ++I +F+ L+D+YAKCG + A
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAI----------SG 174
+F ++ R++ SW +I GYA G+ ++A + + R D ++ + G
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
Query: 175 YVSHGRPR-EALEM-FRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL 232
++ GR E +E + + KHE
Sbjct: 336 FLEEGRSMLENMEARYEITPKHEH------------------------------------ 359
Query: 233 DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS-WTTMIHRCFEDGRREEGFSLFR 291
+S ++DL + G LD+A + ++M K + S W +++ C E G +
Sbjct: 360 ------YSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVK 413
Query: 292 DLM 294
+L+
Sbjct: 414 NLL 416
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 263/515 (51%), Gaps = 40/515 (7%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y LI A R R +GR +HA +S I+ +L+ Y +CG + DA+++FDEM
Sbjct: 19 YVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP 78
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGR----PREALE 186
RD+ MI A+ G+ +++ F EM +D +A I + RE +
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFREM-YKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 187 MFRMMQKHESSNSNKFTLSS--------GLAAAAAIPCLRLGKE--------IHGY---- 226
M + S S+ F +SS G A LG++ I GY
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 227 -------LVR----AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV----DKDVVSWT 271
LV+ G+ D + W+AL+ + + ++ I + M DVVSWT
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWT 257
Query: 272 TMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV 331
++I + + E+ F F+ ++ G+ PN T +L AC A GKE+HGY +
Sbjct: 258 SIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVT 317
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF 391
G + F SAL+D+Y KCG A +F + P+ V++ S+I +A +G D+A+ F
Sbjct: 318 GLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELF 377
Query: 392 ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 451
+ + +G K D +TF +L+AC+HAGL D G F ++ K+ ++ +HYAC++DLL R
Sbjct: 378 DQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGR 437
Query: 452 SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITL 511
+G+ EA +I M ++PD F+W +LL CR HGN+ELA+ AA L E+EPEN + L
Sbjct: 438 AGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLL 497
Query: 512 ANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
++YANAG W +++K ++ + + G SW+E
Sbjct: 498 TSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 180/391 (46%), Gaps = 50/391 (12%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVR-HRAL---EQGRRVHALTKSSNF 99
I A + +E++D + + +L + ++ + ++ R L E G+ +H L ++
Sbjct: 89 IGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSY 148
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
FI + L+D+Y+K G + +A+++F ++G++DL +N MI+GYA ++A L +
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 160 MP----RRDHFSWNAAISGYVSHGRPRE-------------------------------- 183
M + D +WNA ISG+ SH R E
Sbjct: 209 MKLLGIKPDVITWNALISGF-SHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNF 267
Query: 184 ----ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVW 239
A + F+ M H N T+ + L A + ++ GKEIHGY V GL+ V
Sbjct: 268 QNEKAFDAFKQMLTH-GLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR 326
Query: 240 SALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVR 299
SALLD+YGKCG + EA +F + K V++ +MI G ++ LF + +G +
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEK 386
Query: 300 PNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYD--PGSFAGSALVDLYSKCGNTKIAS 357
+ TFT +L AC+ LG+ + +M+ Y P + +VDL + G A
Sbjct: 387 LDHLTFTAILTACSHAGLTDLGQNLF-LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAY 445
Query: 358 RVFNQI-PRPDLVSWTSLIGGFAQNGQPDRA 387
+ + PDL W +L+ +G + A
Sbjct: 446 EMIKAMRMEPDLFVWGALLAACRNHGNMELA 476
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 59 LLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGS 118
+L H P+ TL+ AC ++ G+ +H + + F+ + LLD+Y KCG
Sbjct: 279 MLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGF 338
Query: 119 LADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM----PRRDHFSWNAAISG 174
+++A LF + + ++N+MI YA G ++A +LFD+M + DH ++ A ++
Sbjct: 339 ISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTA 398
Query: 175 YVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL--RLGKEIHGY-LVRAG 231
G +F +MQ NK+ + L A + L R GK + Y +++A
Sbjct: 399 CSHAGLTDLGQNLFLLMQ-------NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
Query: 232 -LDLDEVVWSALLDLYGKCGSLDEAR 256
++ D VW ALL G+++ AR
Sbjct: 452 RMEPDLFVWGALLAACRNHGNMELAR 477
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 237/432 (54%), Gaps = 9/432 (2%)
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
A +FD + + F ++ I +P L F +M K E + L+ A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 213 AIPC--LRLGKEIHGYLVRAGLDL-DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS 269
+ +GK+IH ++V+ G+ L D V + +L +Y + L +AR +FD++ DVV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 270 WTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM 329
W +++ G EG +F++++ G+ P+E++ T L ACA A GK +H ++
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 330 RVGY-DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
+ + + F G+ALVD+Y+KCG + A VF ++ R ++ SW +LIGG+A G +A
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKAT 305
Query: 389 HFFELLLKS-GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 447
+ + + G KPD + +GVL+AC H G +++G +++ ++G+ +HY+C++D
Sbjct: 306 TCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVD 365
Query: 448 LLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP----E 503
L+ R+GR ++A ++I+ M +KP +W +LL GCR H N+EL + A L ++E E
Sbjct: 366 LMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEE 425
Query: 504 NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPK 563
A + L+NIY + + E KVR +E RGI K PG S +E+ V F+ GD SHP
Sbjct: 426 EEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPN 485
Query: 564 IRDIHEFLGELS 575
+ IH + LS
Sbjct: 486 LLQIHTLIHLLS 497
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 37/317 (11%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHA-LTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
PS + LI AC++ G+++H + K+ F+ + +L +Y + +
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYV------EDKL 167
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
LFD ARK+FDE+P+ D W+ ++GYV G E
Sbjct: 168 LFD-------------------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEG 202
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA-GLDLDEVVWSALL 243
LE+F+ M ++F++++ L A A + L GK IH ++ + ++ D V +AL+
Sbjct: 203 LEVFKEMLV-RGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALV 261
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFS-LFRDLMGSGVRPNE 302
D+Y KCG ++ A +F+++ ++V SW +I G ++ + L R G++P+
Sbjct: 262 DMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDS 321
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
GVL ACA G+ + M R G P S +VDL + G A +
Sbjct: 322 VVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIE 381
Query: 362 QIPRPDLVS-WTSLIGG 377
++P L S W +L+ G
Sbjct: 382 KMPMKPLASVWGALLNG 398
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 34/215 (15%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPG-IFISNRLLDLYAKCGSLADAQR 124
P +T + AC + AL QG+ +H K +I +F+ L+D+YAKCG + A
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+F+++ R++ SW +I GYA G+ ++A D + R D ++ +
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV------------ 323
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE-IHGYLVRAGLDLDEVVWSALL 243
L LAA A L G+ + R G+ +S ++
Sbjct: 324 -------------------LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIV 364
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVS-WTTMIHRC 277
DL + G LD+A + ++M K + S W +++ C
Sbjct: 365 DLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGC 399
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 250/472 (52%), Gaps = 41/472 (8%)
Query: 68 PRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFD 127
P ++++L+ C RA++ G RVH L + IS++L+ LYA CG
Sbjct: 92 PEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCG---------- 141
Query: 128 EMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDH--FSWNAAISGYVSHGRPREAL 185
+ E A ++FD M +RD F+WN+ ISGY G+ +A+
Sbjct: 142 ---------------------YAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAM 180
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
++ M + + ++FT L A I +++G+ IH LV+ G D V +AL+ +
Sbjct: 181 ALYFQMAE-DGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVM 239
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y KCG + +AR +FD + KD VSW +M+ G E +FR ++ +G+ P++
Sbjct: 240 YAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAI 299
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
+ VL + +H G+++HG+++R G + +AL+ LYSK G A +F+Q+
Sbjct: 300 SSVLARVL--SFKH-GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
D VSW ++I ++N L +FE + ++ KPD ITFV VLS C + G+V+ G
Sbjct: 357 RDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERL 413
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAEN-IIDNMSIKPDKFLWASLLGGCRIH 484
F + +++G+ +HYAC+++L R+G EA + I+ M ++ +W +LL C +H
Sbjct: 414 FSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLH 473
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
GN ++ + AA LFE+EP+N + L IY+ A + + +VR+ M RG+
Sbjct: 474 GNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 39/299 (13%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P + ++ AC +++ G +H F +++ N L+ +YAKCG + A+
Sbjct: 192 KPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARN 251
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+FD + +D SWN+M+ G Y+ HG EA
Sbjct: 252 VFDMIPHKDYVSWNSMLTG-------------------------------YLHHGLLHEA 280
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L++FR+M ++ +K +SS L A + + G+++HG+++R G++ + V +AL+
Sbjct: 281 LDIFRLMVQN-GIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIV 336
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
LY K G L +A IFDQM+++D VSW +I + G F + + +P+ T
Sbjct: 337 LYSKRGQLGQACFIFDQMLERDTVSWNAIIS---AHSKNSNGLKYFEQMHRANAKPDGIT 393
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
F VL CA+ G+ + M + G DP + +V+LY + G + A + Q
Sbjct: 394 FVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ 452
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/583 (28%), Positives = 286/583 (49%), Gaps = 43/583 (7%)
Query: 34 AKTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHAL 93
AKT+ EAI + R KE D+ +D + +T++ + + G ++H +
Sbjct: 97 AKTDGCESEAIEMFGEMHR-KEKDDIW--IDDFTV---TTMVKLSAKLTNVFYGEQLHGV 150
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDE--MGDRDLCSWNTMIAGYAKLGWLE 151
+ F + L+ +Y+KCG + +F+ + D + N MIA Y + G ++
Sbjct: 151 LVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDID 210
Query: 152 QARKLFDEMPR-RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
+A +F P D SWN I+GY +G EAL+M M+++ ++ + + L
Sbjct: 211 KALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEEN-GLKWDEHSFGAVLNV 269
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLD----------------- 253
+++ L++GKE+H +++ G ++ V S ++D+Y KCG++
Sbjct: 270 LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSA 329
Query: 254 --------------EARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVR 299
EA+ +FD + +K++V WT M + + L R + +
Sbjct: 330 SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETN 389
Query: 300 -PNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR 358
P+ VL AC+ A GKE+HG+ +R G +A VD+YSKCGN + A R
Sbjct: 390 TPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAER 449
Query: 359 VFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGL 418
+F+ D V + ++I G A +G ++ FE + + G KPD+ITF+ +LSAC H GL
Sbjct: 450 IFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGL 509
Query: 419 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM-SIKPDKFLWASL 477
V +G +YF S+ E + + HY C+IDL ++ R ++A +++ + ++ D + +
Sbjct: 510 VLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAF 569
Query: 478 LGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
L C + N EL K L IE N + YI +AN YA++G+W E ++R M + +
Sbjct: 570 LNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELE 629
Query: 538 KKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKE 580
G SW I +Q H+F D SH + I+ L ++K + E
Sbjct: 630 IFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSE 672
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 214/450 (47%), Gaps = 72/450 (16%)
Query: 106 SNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD-EMPRRD 164
SN+L++LY+K G L +A+ +FDEM +R++ SWN +IA Y K +++AR+LF+ + RD
Sbjct: 26 SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERD 85
Query: 165 HFSWNAAISGYV-SHGRPREALEMFRMMQKHESSN--SNKFTLSSGLAAAAAIPCLRLGK 221
++N +SG+ + G EA+EMF M + E + + FT+++ + +A + + G+
Sbjct: 86 LITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGE 145
Query: 222 EIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFD----QMVD------------- 264
++HG LV+ G D + S+L+ +Y KCG E IF+ + VD
Sbjct: 146 QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 265 -----------------KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG 307
D +SW T+I ++G EE + + +G++ +E++F
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGA 265
Query: 308 VLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIAS---------- 357
VL + + +GKEVH +++ G F S +VD+Y KCGN K A
Sbjct: 266 VLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN 325
Query: 358 ---------------------RVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK 396
R+F+ + +LV WT++ G+ QPD L +
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA 385
Query: 397 SGTK-PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+ T PD + V VL AC+ ++ G E H + G++ +D+ ++ G
Sbjct: 386 NETNTPDSLVMVSVLGACSLQAYMEPGKE-IHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 456 NEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
AE I D+ S + D ++ +++ GC HG
Sbjct: 445 EYAERIFDS-SFERDTVMYNAMIAGCAHHG 473
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 268/510 (52%), Gaps = 39/510 (7%)
Query: 59 LLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGS 118
L+ VD P+ YS ++ C + + G+ +HA S+ + + + N LLD+Y CG
Sbjct: 292 LMSGVD-PTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 119 LADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSH 178
+ +A +F + + +L S WN+ ISG +
Sbjct: 351 MREAFYVFGRIHNPNLVS-------------------------------WNSIISGCSEN 379
Query: 179 GRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVV 238
G +A+ M+R + + + +++T S+ ++A A GK +HG + + G + V
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 239 WSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV 298
+ LL +Y K + A+ +FD M ++DVV WT MI G E F ++
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499
Query: 299 RPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASR 358
R + ++ + V+ AC+D A G+ H +R G+D ALVD+Y K G + A
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET 559
Query: 359 VFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGL 418
+F+ PDL W S++G ++Q+G ++AL FFE +L++G PD +T++ +L+AC+H G
Sbjct: 560 IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGS 619
Query: 419 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKF-LWASL 477
+G ++ +KE+ G+ HY+C+++L++++G +EA +I+ ++ LW +L
Sbjct: 620 TLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTL 678
Query: 478 LGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
L C N+++ AA + +++PE+ AT+I L+N+YA G+W + A++R+ +IRG+
Sbjct: 679 LSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR--KIRGLA 736
Query: 538 --KKPGKSWIEI-KRQVHVFLVGDTSHPKI 564
K PG SWIE+ VF GD S+P++
Sbjct: 737 SSKDPGLSWIEVNNNNTQVFSSGDQSNPEV 766
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 185/356 (51%), Gaps = 7/356 (1%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMM--QKHE 195
N +I+ Y + G LEQARK+FD+MP R+ S+NA S Y + P A F + E
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRN--PDFASYAFPLTTHMAFE 193
Query: 196 SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEA 255
N T +S + A + + +G ++ +++ G + VV +++L +Y CG L+ A
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 256 RGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH 315
R IFD + ++D V+W TMI ++ + E+G FR+++ SGV P ++T++ VL C+
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 316 AAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
+ LGK +H ++ +AL+D+Y CG+ + A VF +I P+LVSW S+I
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSII 373
Query: 376 GGFAQNGQPDRALHFFELLLKSGT-KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
G ++NG ++A+ + LL+ T +PD+ TF +SA G + H K G
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG-KLLHGQVTKLG 432
Query: 435 LMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
+ ++ + ++ A+ + D M + D LW ++ G GN ELA
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVGHSRLGNSELA 487
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 185/400 (46%), Gaps = 31/400 (7%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWN--AAISGYVSHGRPRE-------ALEMF 188
N +I+ Y + LEQARK+FD+MP+R+ + +A+ YVS G + +M
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL---DEVVWSALLDL 245
M +E ++S + +I L+ ++IH ++ AG + L+ +
Sbjct: 86 FFMPLNEIASS----VVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR-REEGFSLFRDLMGSGVRPNEYT 304
Y +CGSL++AR +FD+M ++VVS+ + + F L + V+PN T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
FT +++ CA +G ++ ++++GY ++++ +YS CG+ + A R+F+ +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
D V+W ++I G +N + + L FF +L SG P Q T+ VL+ C+ G G
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG-- 319
Query: 425 YFHSIKEKHGLMHTADHYA------CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLL 478
K H + +D A ++D+ G EA + + P+ W S++
Sbjct: 320 -----KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSII 373
Query: 479 GGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANA 518
GC +G E A L + P Y A I A A
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 57 VDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKC 116
+++ +R S++I AC L QG H L + F + + L+D+Y K
Sbjct: 492 IEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKN 551
Query: 117 GSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM 160
G A+ +F + DL WN+M+ Y++ G +E+A F+++
Sbjct: 552 GKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQI 595
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/498 (29%), Positives = 256/498 (51%), Gaps = 70/498 (14%)
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAG 143
+E G ++H L S F +++ L+ +Y++CG
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGE------------------------- 179
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
W+ AR +F+++P + ++NA ISG + +G +F +M+K S N T
Sbjct: 180 -----WVLAAR-MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVT 233
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
+ + A A++ L+ G+++HG +++ + +V +AL+D+Y KC A +F ++
Sbjct: 234 FVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELK 293
Query: 264 D-KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF----------------- 305
D ++++SW ++I +G+ E LF L G++P+ T+
Sbjct: 294 DTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAF 353
Query: 306 ------------------TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLY 347
T +L AC+D GKE+HG++++ + F ++L+D+Y
Sbjct: 354 KFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMY 413
Query: 348 SKCGNTKIASRVFNQI-PRP-DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
KCG + A R+F++ P+P D V W +I G+ ++G+ + A+ FELL + +P T
Sbjct: 414 MKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLAT 473
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
F VLSAC+H G V+KG + F ++E++G + +H C+IDLL RSGR EA+ +ID M
Sbjct: 474 FTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Query: 466 SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEA 525
S +SLLG CR H + L + AA L E+EPENPA ++ L++IYA +W +
Sbjct: 534 SEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVE 592
Query: 526 KVRKDMEIRGIVKKPGKS 543
+R+ ++ + +VK PG S
Sbjct: 593 SIRQVIDQKQLVKLPGLS 610
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 221/508 (43%), Gaps = 79/508 (15%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ + L+ +C + + QGR +HA + F +F + L+ +Y K + DA ++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
DEM +R + S N AA+SG + +G R+A
Sbjct: 89 LDEMPERGIASVN-------------------------------AAVSGLLENGFCRDAF 117
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
MF + S N T++S L I G ++H +++G +++ V ++L+ +
Sbjct: 118 RMFG-DARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSM 173
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRRE---EGFSLFRDLMGSGVRPNE 302
Y +CG A +F+++ K VV++ I E+G F+L R S PN+
Sbjct: 174 YSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKF--SSEEPND 231
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
TF + ACA G+++HG +M+ + + G+AL+D+YSKC K A VF +
Sbjct: 232 VTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTE 291
Query: 363 IPRP-DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
+ +L+SW S+I G NGQ + A+ FE L G KPD T+ ++S + G V +
Sbjct: 292 LKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIE 351
Query: 422 GLEYFHSI----------------------------KEKHGLMHTADH------YACVID 447
++F + KE HG + A +ID
Sbjct: 352 AFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLID 411
Query: 448 LLARSGRFNEAENIIDNMSIKP-DKFLWASLLGGCRIHGNIELAKRAANALFE--IEPEN 504
+ + G + A I D KP D W ++ G HG E A L E +EP +
Sbjct: 412 MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEP-S 470
Query: 505 PATYITLANIYANAGQWAEEAKVRKDME 532
AT+ + + ++ G + +++ + M+
Sbjct: 471 LATFTAVLSACSHCGNVEKGSQIFRLMQ 498
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 163/329 (49%), Gaps = 9/329 (2%)
Query: 64 DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQ 123
+ P+ + I AC L+ GR++H L F + L+D+Y+KC A
Sbjct: 227 EEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAY 286
Query: 124 RLFDEMGD-RDLCSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISGYVSH 178
+F E+ D R+L SWN++I+G G E A +LF+++ + D +WN+ ISG+
Sbjct: 287 IVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQL 346
Query: 179 GRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVV 238
G+ EA + F M S K L+S L+A + I L+ GKEIHG++++A + D V
Sbjct: 347 GKVIEAFKFFERMLSVVMVPSLK-CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFV 405
Query: 239 WSALLDLYGKCGSLDEARGIFDQM--VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS 296
++L+D+Y KCG AR IFD+ KD V W MI + G E +F L
Sbjct: 406 LTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREE 465
Query: 297 GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKI 355
V P+ TFT VL AC+ G ++ M GY P + ++DL + G +
Sbjct: 466 KVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLRE 525
Query: 356 ASRVFNQIPRPDLVSWTSLIGGFAQNGQP 384
A V +Q+ P ++SL+G Q+ P
Sbjct: 526 AKEVIDQMSEPSSSVYSSLLGSCRQHLDP 554
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 166/346 (47%), Gaps = 22/346 (6%)
Query: 196 SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEA 255
S + NKFT L + A + + G+ +H +V+ G +D +AL+ +Y K + +A
Sbjct: 26 SHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDA 85
Query: 256 RGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH 315
+ D+M ++ + S + E+G + F +F D SG N T VL C D
Sbjct: 86 LKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI 145
Query: 316 AAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
G ++H M+ G++ + G++LV +YS+CG +A+R+F ++P +V++ + I
Sbjct: 146 EG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 376 GGFAQNGQPDRALHFFELLLK-SGTKPDQITFVGVLSACTHAGLVDKGLEY---FHSIKE 431
G +NG + F L+ K S +P+ +TFV ++AC A L++ L+Y H +
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC--ASLLN--LQYGRQLHGLVM 258
Query: 432 KHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAK 491
K +ID+ ++ + A + + + W S++ G I+G E A
Sbjct: 259 KKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAV 318
Query: 492 RAANALFE------IEPENPATYITLANIYANAGQWAEEAKVRKDM 531
LFE ++P++ AT+ +L + ++ G+ E K + M
Sbjct: 319 E----LFEKLDSEGLKPDS-ATWNSLISGFSQLGKVIEAFKFFERM 359
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 258/523 (49%), Gaps = 63/523 (12%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPG- 102
I CQ + AV L + L+A +++ L + V L + + + G
Sbjct: 174 ITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV--LGQYGSLVSGR 231
Query: 103 ---IFISNRLLDLYAKCGSLADAQRLFDEMGD---------------RDLCSWNTMIAGY 144
++ N L+ Y + G + A+ LFD++ D +++ SWN+MI Y
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 145 AKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTL 204
K+G + AR LFD+M RD SWN I GYV R +A +F M ++ +
Sbjct: 292 LKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS------ 345
Query: 205 SSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD 264
W+ ++ Y G+++ AR F++ +
Sbjct: 346 ----------------------------------WNMMVSGYASVGNVELARHYFEKTPE 371
Query: 265 KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEV 324
K VSW ++I ++ +E LF + G +P+ +T T +L A LG ++
Sbjct: 372 KHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM 431
Query: 325 HGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQ 383
H +++ P +AL+ +YS+CG + R+F+++ + ++++W ++IGG+A +G
Sbjct: 432 HQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
AL+ F + +G P ITFV VL+AC HAGLVD+ F S+ + + +HY+
Sbjct: 491 ASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYS 550
Query: 444 CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE 503
++++ + G+F EA II +M +PDK +W +LL CRI+ N+ LA AA A+ +EPE
Sbjct: 551 SLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPE 610
Query: 504 NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
+ Y+ L N+YA+ G W E ++VR +ME + I K+ G SW++
Sbjct: 611 SSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 221/510 (43%), Gaps = 99/510 (19%)
Query: 102 GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP 161
G +N+ L+ + G +A+A+ +F+++ R+ +WNTMI+GY K + QARKLFD MP
Sbjct: 39 GFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP 98
Query: 162 RRDHFSWNAAISGYVSHGRPR---EALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
+RD +WN ISGYVS G R EA ++F M +S + N T+ SG A R
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWN--TMISGYAKNR-----R 151
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDV----------- 267
+G+ + L + + V WSA++ + + G +D A +F +M KD
Sbjct: 152 IGEAL--LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLI 209
Query: 268 -------VSWTTMIHRCFEDGRREEGFSLFRDLMGSG----VRPNEYTFTGVLKACA-DH 315
+W + GR + ++ ++G G V F + C DH
Sbjct: 210 KNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDH 269
Query: 316 AA---EHLGKEVHGY------MMRVG------------YDPGSFAGSALVDLYSKCGNTK 354
E K V + ++VG D + + + ++D Y +
Sbjct: 270 GGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRME 329
Query: 355 IASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFE---------------------- 392
A +F+++P D SW ++ G+A G + A H+FE
Sbjct: 330 DAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKD 389
Query: 393 ------LLLK---SGTKPDQITFVGVLSACTHAGLVDKGLEY-FHSIKEKHGLMHTADHY 442
L ++ G KPD T +LSA T GLV+ L H I K + H
Sbjct: 390 YKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKTVIPDVPVHN 447
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP 502
A +I + +R G E+ I D M +K + W +++GG HGN A A N ++
Sbjct: 448 A-LITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN---ASEALNLFGSMKS 503
Query: 503 EN--PA--TYITLANIYANAGQWAEEAKVR 528
P+ T++++ N A+AG +EAK +
Sbjct: 504 NGIYPSHITFVSVLNACAHAGL-VDEAKAQ 532
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 244/487 (50%), Gaps = 51/487 (10%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y +++ +C L++G ++H + N + + + LL LYA+CG +
Sbjct: 116 YGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKM----------- 164
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
E+AR FD M RD SWNA I GY ++ + +F++
Sbjct: 165 --------------------EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQL 204
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M E + FT S L A+ + CL + E+HG ++ G + +L++ Y KCG
Sbjct: 205 MLT-EGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCG 263
Query: 251 SLDEARGIFDQMVDKDVVSWTTMI------HRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
SL A + + +D++S T +I + C D F +F+D++ + +E
Sbjct: 264 SLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDA-----FDIFKDMIRMKTKMDEVV 318
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMR---VGYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
+ +LK C A+ +G+++HG+ ++ + +D G++L+D+Y+K G + A F
Sbjct: 319 VSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA--LGNSLIDMYAKSGEIEDAVLAFE 376
Query: 362 QIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
++ D+ SWTSLI G+ ++G ++A+ + + KP+ +TF+ +LSAC+H G +
Sbjct: 377 EMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTEL 436
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS--IKPDKFLWASLLG 479
G + + ++ KHG+ +H +C+ID+LARSG EA +I + + W + L
Sbjct: 437 GWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLD 496
Query: 480 GCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKK 539
CR HGN++L+K AA L +EP P YI LA++YA G W RK M+ G K
Sbjct: 497 ACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNK 556
Query: 540 -PGKSWI 545
PG S +
Sbjct: 557 APGYSLV 563
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 217/457 (47%), Gaps = 37/457 (8%)
Query: 67 SPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLF 126
SP LY + C +Q +H + ++ F + + + L+DLY K G +
Sbjct: 11 SPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDV------- 63
Query: 127 DEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALE 186
+ ARKLFD + +RD SW A IS + G +AL
Sbjct: 64 ------------------------KHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALL 99
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
+F+ M + E +N+FT S L + + CL+ G +IHG + + + +V SALL LY
Sbjct: 100 LFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLY 158
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
+CG ++EAR FD M ++D+VSW MI + + FSLF+ ++ G +P+ +TF
Sbjct: 159 ARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFG 218
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
+L+A + E+HG +++G+ S +LV+ Y KCG+ A ++ +
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR 278
Query: 367 DLVSWTSLIGGFA-QNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
DL+S T+LI GF+ QN A F+ +++ TK D++ +L CT V G +
Sbjct: 279 DLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQI 338
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
+ + +ID+ A+SG +A + M K D W SL+ G HG
Sbjct: 339 HGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK-DVRSWTSLIAGYGRHG 397
Query: 486 NIELAKRAANAL--FEIEPENPATYITLANIYANAGQ 520
N E A N + I+P N T+++L + ++ GQ
Sbjct: 398 NFEKAIDLYNRMEHERIKP-NDVTFLSLLSACSHTGQ 433
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 223/409 (54%), Gaps = 7/409 (1%)
Query: 167 SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGY 226
+WN GY S P E++ ++ M K NK T L A A+ L G++I
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEM-KRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 227 LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEG 286
+++ G D D V + L+ LYG C +AR +FD+M +++VVSW +++ E+G+
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
F F +++G P+E T +L AC + + LGK VH +M + G+ALVD+
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSACGGNLS--LGKLVHSQVMVRELELNCRLGTALVDM 256
Query: 347 YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK-SGTKPDQIT 405
Y+K G + A VF ++ ++ +W+++I G AQ G + AL F ++K S +P+ +T
Sbjct: 257 YAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVT 316
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
F+GVL AC+H GLVD G +YFH +++ H + HY ++D+L R+GR NEA + I M
Sbjct: 317 FLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKM 376
Query: 466 SIKPDKFLWASLLGGCRIHGNIE---LAKRAANALFEIEPENPATYITLANIYANAGQWA 522
+PD +W +LL C IH + + + ++ L E+EP+ + +AN +A A WA
Sbjct: 377 PFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWA 436
Query: 523 EEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFL 571
E A+VR+ M+ + K G+S +E+ H F G + I+E L
Sbjct: 437 EAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 142/317 (44%), Gaps = 39/317 (12%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P+ + L+ AC L GR++ F +++ N L+ LY C +DA
Sbjct: 110 KPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDA-- 167
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
RK+FDEM R+ SWN+ ++ V +G+
Sbjct: 168 -----------------------------RKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 185 LEMF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
E F M+ K + T+ L+A L LGK +H ++ L+L+ + +AL+
Sbjct: 199 FECFCEMIGKRFCPDET--TMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG-SGVRPNE 302
D+Y K G L+ AR +F++MVDK+V +W+ MI + G EE LF +M S VRPN
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
TF GVL AC+ G + M ++ P A+VD+ + G A
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Query: 362 QIP-RPDLVSWTSLIGG 377
++P PD V W +L+
Sbjct: 375 KMPFEPDAVVWRTLLSA 391
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 7/295 (2%)
Query: 222 EIHGYLVRAGLDLDEVVWSALLDL--YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
+IHG + + L D + S L+ + L AR + D +W +
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
E ++ ++ G++PN+ TF +LKACA G+++ +++ G+D +
Sbjct: 91 SDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYV 150
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
G+ L+ LY C T A +VF+++ ++VSW S++ +NG+ + F ++
Sbjct: 151 GNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRF 210
Query: 400 KPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE 459
PD+ T V +LSAC G + G + HS L ++D+ A+SG A
Sbjct: 211 CPDETTMVVLLSAC--GGNLSLG-KLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYAR 267
Query: 460 NIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANI 514
+ + M + + + W++++ G +G E A + + + + P Y+T +
Sbjct: 268 LVFERM-VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP-NYVTFLGV 320
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 261/524 (49%), Gaps = 51/524 (9%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF-IPGIFISNRLLDLYAKCGSLADAQR 124
P ++++ AC ++ GR VH + F + +F+ N L+D+Y+K + A R
Sbjct: 224 PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFR 283
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
+FDE R++ SWN+++A G+V + R EA
Sbjct: 284 VFDETTCRNIVSWNSILA-------------------------------GFVHNQRYDEA 312
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAA----AAIPCLRLGKEIHGYLVRAGLDLDEVVWS 240
LEMF +M + E+ ++ T+ S L +PC K IHG ++R G + +EV S
Sbjct: 313 LEMFHLMVQ-EAVEVDEVTVVSLLRVCKFFEQPLPC----KSIHGVIIRRGYESNEVALS 367
Query: 241 ALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRP 300
+L+D Y C +D+A + D M KDVVS +TMI GR +E S+F + + P
Sbjct: 368 SLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---P 424
Query: 301 NEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA-GSALVDLYSKCGNTKIASRV 359
N T +L AC+ A K HG +R + G+++VD Y+KCG ++A R
Sbjct: 425 NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRT 484
Query: 360 FNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLV 419
F+QI +++SWT +I +A NG PD+AL F+ + + G P+ +T++ LSAC H GLV
Sbjct: 485 FDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLV 544
Query: 420 DKGLEYFHS-IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM--SIKPDKFLWAS 476
KGL F S ++E H + HY+C++D+L+R+G + A +I N+ +K W +
Sbjct: 545 KKGLMIFKSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGA 602
Query: 477 LLGGCRIH-GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
+L GCR + + + E+EP + Y+ ++ +A W + A +R+ ++ R
Sbjct: 603 ILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERK 662
Query: 536 IVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMK 579
+ G S + FL GD ++++ + L + MK
Sbjct: 663 VRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMK 706
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 176/350 (50%), Gaps = 8/350 (2%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N+++ YA L ARKLFDEM RD SW+ I YV P L++F+ M +
Sbjct: 164 NSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV-VWSALLDLYGKCGSLDEAR 256
+ T++S L A + + +G+ +HG+ +R G DL +V V ++L+D+Y K +D A
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+FD+ +++VSW +++ + R +E +F ++ V +E T +L+ C
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
K +HG ++R GY+ A S+L+D Y+ C A V + + D+VS +++I
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL- 435
G A G+ D A+ F + + P+ IT + +L+AC+ + + + ++ H I + L
Sbjct: 403 GLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADL-RTSKWAHGIAIRRSLA 458
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
++ ++D A+ G A D ++ K + W ++ I+G
Sbjct: 459 INDISVGTSIVDAYAKCGAIEMARRTFDQITEK-NIISWTVIISAYAING 507
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 217/486 (44%), Gaps = 60/486 (12%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N++ Y K G L + FD M RD SWN + G + +G E L F ++
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW-GF 123
Query: 198 NSNKFTLSSGLAAAAAIPCLRL---GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDE 254
N TL + A C L G++IHGY++R+G V +++L +Y SL
Sbjct: 124 EPNTSTLVLVIHA-----CRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-S 177
Query: 255 ARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACA 313
AR +FD+M ++DV+SW+ +I + G LF++++ P+ T T VLKAC
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 314 DHAAEHLGKEVHGYMMRVGYDPGS-FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
+G+ VHG+ +R G+D F ++L+D+YSK + A RVF++ ++VSW
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC-----------THAGLVDK 421
S++ GF N + D AL F L+++ + D++T V +L C H ++ +
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 422 GLEY----FHSIKEKHGLMHTADHYACVIDL---------------LARSGRFNEAENII 462
G E S+ + + D V+D LA +GR +EA +I
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 463 DNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALF--EIEPENPATYITLANIYANAGQ 520
+M P+ SLL C + ++ +K A + + + ++ + YA G
Sbjct: 418 CHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGA 477
Query: 521 WAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKE 580
E A+ D I +K SW I S I + + L +MK+
Sbjct: 478 -IEMARRTFDQ----ITEKNIISWTVI-----------ISAYAINGLPDKALALFDEMKQ 521
Query: 581 EGYVPD 586
+GY P+
Sbjct: 522 KGYTPN 527
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 6/158 (3%)
Query: 44 INALCQQKRLKEAVDLLHHV-DRPSPRLYSTLIAACVRHRALEQGRRVHALT-KSSNFIP 101
I+ L R EA+ + H+ D P+ +L+ AC L + H + + S I
Sbjct: 401 ISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 102 GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP 161
I + ++D YAKCG++ A+R FD++ ++++ SW +I+ YA G ++A LFDEM
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 162 RRDH----FSWNAAISGYVSHGRPREALEMFRMMQKHE 195
++ + ++ AA+S G ++ L +F+ M + +
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 20/134 (14%)
Query: 281 GRREEGFSLFRDLMGSGVRPNE-YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
G+ E S + ++ +GV+ N+ + F V KACA + F
Sbjct: 23 GKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLS-------------------WLFQ 63
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT 399
G+++ D Y KCG+ R F+ + D VSW ++ G G + L +F L G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 400 KPDQITFVGVLSAC 413
+P+ T V V+ AC
Sbjct: 124 EPNTSTLVLVIHAC 137
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 267/513 (52%), Gaps = 30/513 (5%)
Query: 47 LCQQKRLKEAVDLLHHVDR------PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFI 100
L Q ++ KE VD+ ++D PS ++++ AC + + G+ +HA +
Sbjct: 79 LSQHRKFKETVDV--YIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLC 136
Query: 101 PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM 160
+++ L+ LY++ G + A++ FD++ +++ SWN+++ GY + G L++AR++FD++
Sbjct: 137 GCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI 196
Query: 161 PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLG 220
P +D SWN IS Y G A +F M ++ N + + C +
Sbjct: 197 PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWN-------ILIGGYVNCREMK 249
Query: 221 KEIHGYLVRAGLDL----DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
L R D + V W ++ Y K G + A +F M KD + + MI
Sbjct: 250 ------LARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIAC 303
Query: 277 CFEDGRREEGFSLFRDLM--GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYD 334
++G+ ++ LF ++ S ++P+E T + V+ A + G V Y+ G
Sbjct: 304 YTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIK 363
Query: 335 PGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELL 394
++L+DLY K G+ A ++F+ + + D VS++++I G NG A F +
Sbjct: 364 IDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM 423
Query: 395 LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 454
++ P+ +TF G+LSA +H+GLV +G + F+S+K+ H L +ADHY ++D+L R+GR
Sbjct: 424 IEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGR 482
Query: 455 FNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYIT-LAN 513
EA +I +M ++P+ +W +LL +H N+E + A + ++E + P Y++ LA
Sbjct: 483 LEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETD-PTGYLSHLAM 541
Query: 514 IYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
IY++ G+W + VR ++ + + K G SW+E
Sbjct: 542 IYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 135/334 (40%), Gaps = 34/334 (10%)
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
D SW ++ + + +E ++ D+ SG+ P+ + T VL+AC GK +H
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPD 385
++ G + + LV LYS+ G ++A + F+ I + VSW SL+ G+ ++G+ D
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 386 RALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACV 445
A F+ + + D +++ ++S+ G + F ++ K + + +
Sbjct: 188 EARRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK-----SPASWNIL 238
Query: 446 IDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEI-EPEN 504
I A D M K + W +++ G G+++ +A LF + ++
Sbjct: 239 IGGYVNCREMKLARTYFDAMPQK-NGVSWITMISGYTKLGDVQ----SAEELFRLMSKKD 293
Query: 505 PATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGK-------------------SWI 545
Y + Y G+ + K+ M R +P + +W+
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV 353
Query: 546 EIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMK 579
E H + D + D++ G+ +K K
Sbjct: 354 ESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFK 387
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 248/483 (51%), Gaps = 43/483 (8%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
+ T + +C R + G +H + S F+ + N L+ Y CG ++DA
Sbjct: 128 FITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDA-------- 179
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR-DHFSWNAAISGYVSHGRPREALEMFR 189
RK+FDEMP+ D +++ ++GY+ + AL++FR
Sbjct: 180 -----------------------RKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFR 216
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
+M+K E N TL S L+A + + L + H ++ GLDLD + +AL+ +YGK
Sbjct: 217 IMRKSEVV-VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKT 275
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
G + AR IFD + KDVV+W MI + + G EE L R + ++PN TF G+L
Sbjct: 276 GGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLL 335
Query: 310 KACADHAAEHLGKEVHGYMM--RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPD 367
+CA A +G+ V + R+ D + G+ALVD+Y+K G + A +FN++ D
Sbjct: 336 SSCAYSEAAFVGRTVADLLEEERIALD--AILGTALVDMYAKVGLLEKAVEIFNRMKDKD 393
Query: 368 LVSWTSLIGGFAQNGQPDRALHFFELLLKSGTK--PDQITFVGVLSACTHAGLVDKGLEY 425
+ SWT++I G+ +G A+ F + + K P++ITF+ VL+AC+H GLV +G+
Sbjct: 394 VKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRC 453
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
F + E + +HY CV+DLL R+G+ EA +I N+ I D W +LL CR++G
Sbjct: 454 FKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYG 513
Query: 486 NIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
N +L + L E+ +PA I LA +A AG + D E+ K+ G S I
Sbjct: 514 NADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSL----DNELNKGRKEAGYSAI 569
Query: 546 EIK 548
EI+
Sbjct: 570 EIE 572
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 178/386 (46%), Gaps = 13/386 (3%)
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
A +F+ + + F +N I GY P A +F + + + ++F+ + L + +
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQL-RAKGLTLDRFSFITTLKSCS 136
Query: 213 AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK-DVVSWT 271
C+ +G+ +HG +R+G + + +AL+ Y CG + +AR +FD+M D V+++
Sbjct: 137 RELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFS 196
Query: 272 TMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV 331
T+++ + ++ LFR + S V N T L A +D + H +++
Sbjct: 197 TLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKI 256
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF 391
G D +AL+ +Y K G A R+F+ R D+V+W +I +A+ G + +
Sbjct: 257 GLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLL 316
Query: 392 ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 451
+ KP+ TFVG+LS+C ++ G + E+ + A ++D+ A+
Sbjct: 317 RQMKYEKMKPNSSTFVGLLSSCAYSEAAFVG-RTVADLLEEERIALDAILGTALVDMYAK 375
Query: 452 SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE------NP 505
G +A I + M K K W +++ G HG LA+ A ++E E N
Sbjct: 376 VGLLEKAVEIFNRMKDKDVKS-WTAMISGYGAHG---LAREAVTLFNKMEEENCKVRPNE 431
Query: 506 ATYITLANIYANAGQWAEEAKVRKDM 531
T++ + N ++ G E + K M
Sbjct: 432 ITFLVVLNACSHGGLVMEGIRCFKRM 457
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 223 IHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
IHGY+V+ GLD D+ S LL + + A IF+ + + ++ + TMI
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSA 342
E FS+F L G+ + ++F LK+C+ +G+ +HG +R G+ + +A
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 343 LVDLYSKCGNTKIASRVFNQIPRP-DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
L+ Y CG A +VF+++P+ D V++++L+ G+ Q + AL F ++ KS
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVV 225
Query: 402 DQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
+ T + LSA + G + G E H + K GL +I + ++G + A I
Sbjct: 226 NVSTLLSFLSAISDLGDL-SGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRI 284
Query: 462 IDNMSIKPDKFLWASLL 478
D +I+ D W ++
Sbjct: 285 FD-CAIRKDVVTWNCMI 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 114/296 (38%), Gaps = 35/296 (11%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ + L+E V LL + +P+ + L+++C A GR V L +
Sbjct: 300 IDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERI 359
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ L+D+YAK G L A +F+ M D+D+ SW MI+GY G +A LF++
Sbjct: 360 ALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNK 419
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
M + RP E + + S G I C +
Sbjct: 420 MEEEN------------CKVRPNEITFLVVLN-----------ACSHGGLVMEGIRCFKR 456
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMIHRCF 278
E + + + + ++DL G+ G L+EA + + + D +W ++ C
Sbjct: 457 MVEAYSFTPKVEH------YGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACR 510
Query: 279 EDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
G + G S+ L G P + A A + + L E++ GY
Sbjct: 511 VYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNELNKGRKEAGY 566
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 239/453 (52%), Gaps = 4/453 (0%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D D+ +I Y K G E + ++ + +P +D W ISG + GR +AL +F
Sbjct: 277 DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSE 336
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M + S S++ ++S +A+ A + LG +HGY++R G LD ++L+ +Y KCG
Sbjct: 337 MLQSGSDLSSE-AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRP-NEYTFTGVL 309
LD++ IF++M ++D+VSW +I ++ + LF ++ V+ + +T +L
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
+AC+ A +GK +H ++R P S +ALVD+YSKCG + A R F+ I D+V
Sbjct: 456 QACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
SW LI G+ +G+ D AL + L SG +P+ + F+ VLS+C+H G+V +GL+ F S+
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
G+ +H ACV+DLL R+ R +A +P + +L CR +G E+
Sbjct: 576 VRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEV 635
Query: 490 AKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKR 549
+ E++P + Y+ L + +A +W + ++ M G+ K PG S IE+
Sbjct: 636 EDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNG 695
Query: 550 QVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEG 582
+ F + TSH D L LS++M + G
Sbjct: 696 KTTTFFMNHTSHSD--DTVSLLKLLSREMMQFG 726
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 208/404 (51%), Gaps = 7/404 (1%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D D+ N+M+ Y K + A+ LFD+M +RD SWN ISGY S G E L++
Sbjct: 176 DCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYR 235
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M + + ++ T + L+ + + L +G+ +H +V+ G D+D + +AL+ +Y KCG
Sbjct: 236 M-RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCG 294
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
+ + + + + +KDVV WT MI GR E+ +F +++ SG + V+
Sbjct: 295 KEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVA 354
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
+CA + LG VHGY++R GY + A ++L+ +Y+KCG+ + +F ++ DLVS
Sbjct: 355 SCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVS 414
Query: 371 WTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
W ++I G+AQN +AL F E+ K+ + D T V +L AC+ AG + G + H I
Sbjct: 415 WNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCI 473
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
+ + + ++D+ ++ G A+ D++S K D W L+ G HG ++
Sbjct: 474 VIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDI 532
Query: 490 AKRAANALFE--IEPENPATYITLANIYANAGQWAEEAKVRKDM 531
A + +EP N ++ + + ++ G + K+ M
Sbjct: 533 ALEIYSEFLHSGMEP-NHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 203/462 (43%), Gaps = 51/462 (11%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P + +L+ AC + L G +H + F +IS+ L++LYAK
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAK---------- 93
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
G L ARK+F+EM RD W A I Y G EA
Sbjct: 94 ---------------------FGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 186 EMFRMM--QKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
+ M Q + + SG+ + CL H + V G D D V +++L
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCL------HDFAVIYGFDCDIAVMNSML 186
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
+LY KC + +A+ +FDQM +D+VSW TMI G E L + G G+RP++
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQ 246
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
TF L +G+ +H +++ G+D +AL+ +Y KCG + + RV I
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETI 306
Query: 364 PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
P D+V WT +I G + G+ ++AL F +L+SG+ V+++C G D G
Sbjct: 307 PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGA 366
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRI 483
H +HG +I + A+ G +++ I + M+ + D W +++ G
Sbjct: 367 S-VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG--Y 422
Query: 484 HGNIELAKRAANALFE------IEPENPATYITLANIYANAG 519
N++L K A LFE ++ + T ++L ++AG
Sbjct: 423 AQNVDLCK--ALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG 462
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 6/323 (1%)
Query: 168 WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
+N+ I+ SHG ++ L F M ++ + FT S L A A++ L G IH +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLL-PDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGF 287
+ G D + S+L++LY K G L AR +F++M ++DVV WT MI G E
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 288 SLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLY 347
SL ++ G++P T +L + +H + + G+D +++++LY
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 348 SKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFV 407
KC + A +F+Q+ + D+VSW ++I G+A G L + G +PDQ TF
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
LS ++ G H K G +I + + G+ + +++ +
Sbjct: 250 ASLSVSGTMCDLEMG-RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 468 KPDKFLWASLLGGCRIHGNIELA 490
K D W ++ G G E A
Sbjct: 309 K-DVVCWTVMISGLMRLGRAEKA 330
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 253/516 (49%), Gaps = 43/516 (8%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVDRP----SPRLYSTLIAACVRHRALEQGRRV 90
K+ ++ I A Q +EA+ + ++ SP L++A V H L
Sbjct: 215 KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------ 268
Query: 91 HALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWL 150
H L + I + L+ Y++CG L A+RL+ + ++++ YA+ G +
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 151 EQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
+ A F + R+ +A + HG + + H
Sbjct: 329 DIAVVYFSK-TRQLCMKIDAVALVGILHGCKKSS---------H---------------- 362
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSW 270
+ +G +HGY +++GL +V + L+ +Y K ++ +F+Q+ + ++SW
Sbjct: 363 ------IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 271 TTMIHRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMM 329
++I C + GR F +F +M +G + P+ T +L C+ +LGKE+HGY +
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 330 RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALH 389
R ++ +F +AL+D+Y+KCGN A VF I P +W S+I G++ +G RAL
Sbjct: 477 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALS 536
Query: 390 FFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 449
+ + + G KPD+ITF+GVLSAC H G VD+G F ++ ++ G+ T HYA ++ LL
Sbjct: 537 CYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLL 596
Query: 450 ARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYI 509
R+ F EA +I M IKPD +W +LL C IH +E+ + A +F ++ +N Y+
Sbjct: 597 GRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYV 656
Query: 510 TLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
++N+YA W + +VR M+ G G S I
Sbjct: 657 LMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 186/399 (46%), Gaps = 28/399 (7%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
DR + +++ Y K G + A+ LFDEMP RD WNA I GY +G +A ++F +
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M + S S TL + L + G+ +HG ++GL+LD V +AL+ Y KC
Sbjct: 142 MLQQGFSPSAT-TLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA 200
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
L A +F +M DK VSW TMI + G +EE ++F+++ V + T +L
Sbjct: 201 ELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
A H + +H +++ G ++LV YS+CG A R++ + +V
Sbjct: 261 AHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVG 314
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK 430
TS++ +A+ G D A+ +F + K D + VG+L C + +D G+ H
Sbjct: 315 LTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS-LHGYA 373
Query: 431 EKHGLMHTADHYACVIDLLARSGRFNEAENII---DNMSIKPDKFLWASLLGGCRIHGNI 487
K GL V L+ +F++ E ++ + + P W S++ GC G
Sbjct: 374 IKSGL---CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP-LISWNSVISGCVQSG-- 427
Query: 488 ELAKRAANALFEIEPENPAT------YITLANIYANAGQ 520
RA+ A FE+ + T IT+A++ A Q
Sbjct: 428 ----RASTA-FEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 207/500 (41%), Gaps = 63/500 (12%)
Query: 54 KEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLY 113
K + +L PS L+ C + + QGR VH + S + N L+ Y
Sbjct: 137 KLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFY 196
Query: 114 AKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAIS 173
+KC A+LG A LF EM + SWN I
Sbjct: 197 SKC----------------------------AELG---SAEVLFREMKDKSTVSWNTMIG 225
Query: 174 GYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD 233
Y G EA+ +F+ M + S T+ + L+A + + +H +V+ G+
Sbjct: 226 AYSQSGLQEEAITVFKNMFEKNVEIS-PVTIINLLSAHVS------HEPLHCLVVKCGMV 278
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDL 293
D V ++L+ Y +CG L A ++ +V T+++ E G + F
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 294 MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT 353
++ + G+L C + +G +HGY ++ G + + L+ +YSK +
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 398
Query: 354 KIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSA 412
+ +F Q+ L+SW S+I G Q+G+ A F +++L G PD IT +L+
Sbjct: 399 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 458
Query: 413 CTHAGLVDKGLEYFHSIKEKHGLM----HTADHYAC--VIDLLARSGRFNEAENIIDNMS 466
C+ ++ G KE HG +++ C +ID+ A+ G +AE++ ++
Sbjct: 459 CSQLCCLNLG-------KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK 511
Query: 467 IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPEN--PATYITLANIYA-NAGQWAE 523
P W S++ G + G L RA + E+ + P L + A N G + +
Sbjct: 512 -APCTATWNSMISGYSLSG---LQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVD 567
Query: 524 EAKVRKDMEIRGIVKKPGKS 543
E K+ R ++K+ G S
Sbjct: 568 EGKIC----FRAMIKEFGIS 583
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 13/288 (4%)
Query: 178 HGRPREA-LEMFRMMQKHESSNSNKFTLSSGL-AAAAAIPCLRLGKE-IHGYLVRAGLDL 234
HG + + +FR + + S N FT+S L A + +L E + +L ++GLD
Sbjct: 25 HGEISSSPITIFRDLLR-SSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDR 83
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM 294
V ++LL+LY K G + A+ +FD+M ++D V W +I +G + + LF ++
Sbjct: 84 FVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVML 143
Query: 295 GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK 354
G P+ T +L C G+ VHG + G + S +AL+ YSKC
Sbjct: 144 QQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELG 203
Query: 355 IASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA-C 413
A +F ++ VSW ++IG ++Q+G + A+ F+ + + + +T + +LSA
Sbjct: 204 SAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHV 263
Query: 414 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
+H E H + K G+++ ++ +R G AE +
Sbjct: 264 SH--------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 5/250 (2%)
Query: 265 KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACAD--HAAEHLGK 322
+D+ + +++ C ++FRDL+ S + PN +T + L+A ++ + +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNG 382
+V ++ + G D + ++L++LY K G A +F+++P D V W +LI G+++NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
A F ++L+ G P T V +L C G V +G H + K GL +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG-RSVHGVAAKSGLELDSQVK 189
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEP 502
+I ++ AE + M K W +++G G E A +FE
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDK-STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 503 E-NPATYITL 511
E +P T I L
Sbjct: 249 EISPVTIINL 258
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 256/501 (51%), Gaps = 50/501 (9%)
Query: 55 EAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
+ + L + R SP L ++ ++ AC E GR+VHAL G L+
Sbjct: 67 DTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALI 126
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNA 170
D+Y+K G L D+ R+ F+ + +D SWNA
Sbjct: 127 DMYSKYGHLVDSVRV-------------------------------FESVEEKDLVSWNA 155
Query: 171 AISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA 230
+SG++ +G+ +EAL +F M + E ++FTLSS + A++ L+ GK++H +V
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYR-ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 231 GLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVVSWTTMIHRCFEDGRREEGFSL 289
G DL V+ +A++ Y G ++EA +++ + V D V ++I C + +E F
Sbjct: 215 GRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-- 271
Query: 290 FRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSK 349
L+ S RPN + L C+D++ +GK++H +R G+ S + L+D+Y K
Sbjct: 272 ---LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 350 CGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLK--SGTKPDQITFV 407
CG A +F IP +VSWTS+I +A NG +AL F + + SG P+ +TF+
Sbjct: 329 CGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
V+SAC HAGLV +G E F +KEK+ L+ +HY C ID+L+++G E +++ M
Sbjct: 389 VVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMME 448
Query: 468 KPDK----FLWASLLGGCRIHGNIELAKRAANALF-EIEPENPATYITLANIYANAGQWA 522
++ +W ++L C ++ ++ + A L E PEN + Y+ ++N YA G+W
Sbjct: 449 NDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWD 508
Query: 523 EEAKVRKDMEIRGIVKKPGKS 543
++R ++ +G+VK G S
Sbjct: 509 VVEELRGKLKNKGLVKTAGHS 529
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 193/408 (47%), Gaps = 25/408 (6%)
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F +G+ + S N ++ + A LFDE+P+RD S N+ +S ++ G P + L
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 186 EMFRMMQKHESS---NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSAL 242
+F +Q H +S +S+ FT G + + P G+++H +++ G + + +AL
Sbjct: 70 ALF--LQIHRASPDLSSHTFTPVLGACSLLSYP--ETGRQVHALMIKQGAETGTISKTAL 125
Query: 243 LDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
+D+Y K G L ++ +F+ + +KD+VSW ++ +G+ +E +F + V +E
Sbjct: 126 IDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE 185
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
+T + V+K CA GK+VH ++ G D G+A++ YS G A +V+N
Sbjct: 186 FTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNS 244
Query: 363 I-PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
+ D V SLI G +N A LL S +P+ L+ C+ +
Sbjct: 245 LNVHTDEVMLNSLISGCIRNRNYKEA-----FLLMSRQRPNVRVLSSSLAGCSDNSDLWI 299
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL--WASLLG 479
G + H + ++G + + ++D+ + G+ +A I + P K + W S++
Sbjct: 300 G-KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAI---PSKSVVSWTSMID 355
Query: 480 GCRIHGN----IELAKRAANALFEIEPENPATYITLANIYANAGQWAE 523
++G+ +E+ + + P N T++ + + A+AG E
Sbjct: 356 AYAVNGDGVKALEIFREMCEEGSGVLP-NSVTFLVVISACAHAGLVKE 402
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGI 103
I+ + + KEA LL RP+ R+ S+ +A C + L G+++H + + F+
Sbjct: 258 ISGCIRNRNYKEAF-LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDS 316
Query: 104 FISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR 163
+ N L+D+Y KCG + A+ +F + + + SW +MI YA G +A ++F EM
Sbjct: 317 KLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEE 376
Query: 164 ------DHFSWNAAISGYVSHGRPREALEMFRMMQK 193
+ ++ IS G +E E F MM++
Sbjct: 377 GSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE 412
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 214/423 (50%), Gaps = 47/423 (11%)
Query: 166 FSWNAAISGYVSHGRPREALEMFRMMQKHES----SNSNKFTLSSGLAAAAAIPCLRLGK 221
S +S Y + G +AL +F +Q H S +++ F+L+ AAA P L G
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLF--LQMHSSFALPLDAHVFSLALKSCAAAFRPVL--GG 68
Query: 222 EIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDG 281
+H + V++ + V ALLD+YGKC S+ AR +FD++ ++ V W MI G
Sbjct: 69 SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 282 RREEGFSLFRDLMGSGVRPNEYTFTGVLK------------------------------- 310
+ +E L+ + V PNE +F ++K
Sbjct: 129 KVKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITL 185
Query: 311 -----ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
AC+ A L KE+H Y R +P S LV+ Y +CG+ VF+ +
Sbjct: 186 LALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
D+V+W+SLI +A +G + AL F+ + + PD I F+ VL AC+HAGL D+ L Y
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVY 305
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
F ++ +GL + DHY+C++D+L+R GRF EA +I M KP W +LLG CR +G
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 486 NIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
IELA+ AA L +EPENPA Y+ L IY + G+ E ++R M+ G+ PG SW
Sbjct: 366 EIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWC 425
Query: 546 EIK 548
K
Sbjct: 426 LFK 428
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 189/383 (49%), Gaps = 24/383 (6%)
Query: 36 TNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
N E+A+N Q A+ L HV +S + +C G VHA +
Sbjct: 24 NQGNHEQALNLFLQMHS-SFALPLDAHV-------FSLALKSCAAAFRPVLGGSVHAHSV 75
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARK 155
SNF+ F+ LLD+Y KC S++ A++LFDE+ R+ WN MI+ Y G +++A +
Sbjct: 76 KSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVE 135
Query: 156 LF---DEMPRRDHFSWNAAISGYV-SHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
L+ D MP F NA I G V + A+E +R M + N TL + ++A
Sbjct: 136 LYEAMDVMPNESSF--NAIIKGLVGTEDGSYRAIEFYRKMIEFR-FKPNLITLLALVSAC 192
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWT 271
+AI RL KEIH Y R ++ + S L++ YG+CGS+ + +FD M D+DVV+W+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 272 TMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV 331
++I G E F+++ + V P++ F VLKAC+ HA L E Y R+
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACS-HAG--LADEALVYFKRM 309
Query: 332 GYDPGSFAG----SALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDR 386
D G A S LVD+ S+ G + A +V +P +P +W +L+G G+ +
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 387 A-LHFFELLLKSGTKPDQITFVG 408
A + ELL+ P +G
Sbjct: 370 AEIAARELLMVEPENPANYVLLG 392
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 259/508 (50%), Gaps = 15/508 (2%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPR----LYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I + + KR +E+V + + R Y ++I AC GR VH + S+
Sbjct: 156 IGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSH 215
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+++ N L+ +Y + G + A+RLFD M +RD SWN +I Y L +A KL D
Sbjct: 216 RCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 160 M----PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
M +WN G + G AL M ++ + + +GL A + I
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM-RNCNVRIGSVAMINGLKACSHIG 334
Query: 216 CLRLGKEIHGYLVRA---GLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTT 272
L+ GK H ++R+ D+D V ++L+ +Y +C L A +F Q+ + +W +
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVR-NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 273 MIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR-V 331
+I + R EE L ++++ SG PN T +L A GKE H Y++R
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF 391
Y ++LVD+Y+K G A RVF+ + + D V++TSLI G+ + G+ + AL +F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 392 ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 451
+ + +SG KPD +T V VLSAC+H+ LV +G F ++ G+ +HY+C++DL R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 452 SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA-LFEIEPENPATYIT 510
+G ++A +I + +P + A+LL C IHGN + + AA+ L E +PE+ Y+
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 511 LANIYANAGQWAEEAKVRKDMEIRGIVK 538
LA++YA G W++ V+ + G+ K
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 193/462 (41%), Gaps = 76/462 (16%)
Query: 70 LYST--LIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFD 127
LYS+ L++ CV G+++HA SS + +L+ Y+ L +AQ + +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE 142
Query: 128 EMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEM 187
WN +I Y+ + R +E++ +
Sbjct: 143 NSEILHPLPWNVLIG-------------------------------SYIRNKRFQESVSV 171
Query: 188 F-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
+ RMM K +++FT S + A AA+ G+ +HG + + + V +AL+ +Y
Sbjct: 172 YKRMMSK--GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
+ G +D AR +FD+M ++D VSW +I+ + + E F L + SGV + T+
Sbjct: 230 KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWN 289
Query: 307 GV-----------------------------------LKACADHAAEHLGKEVHGYMMR- 330
+ LKAC+ A GK H ++R
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 331 --VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
+D + S L+ +YS+C + + A VF Q+ L +W S+I GFA N + +
Sbjct: 350 CSFSHDIDNVRNS-LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDL 448
+ +L SG P+ IT +L G + G E+ I + + ++D+
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 449 LARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
A+SG A+ + D+M K DK + SL+ G G E+A
Sbjct: 469 YAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVA 509
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 5/245 (2%)
Query: 176 VSHGRPREALEMFRMMQKHESSNSNKFTLSSG---LAAAAAIPCLRLGKEIHGYLVRAGL 232
+SHG+ EA F +++ S S++F L S L+ G+++H + + +GL
Sbjct: 57 ISHGQLYEAFRTFSLLRYQ--SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGL 114
Query: 233 DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
+ D V+ L+ Y LDEA+ I + + W +I + R +E S+++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
+M G+R +E+T+ V+KACA G+ VHG + + + +AL+ +Y + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 353 TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
+A R+F+++ D VSW ++I + + A + + SG + +T+ +
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 413 CTHAG 417
C AG
Sbjct: 295 CLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 259/508 (50%), Gaps = 15/508 (2%)
Query: 44 INALCQQKRLKEAVDLLHHVDRPSPR----LYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I + + KR +E+V + + R Y ++I AC GR VH + S+
Sbjct: 156 IGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSH 215
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+++ N L+ +Y + G + A+RLFD M +RD SWN +I Y L +A KL D
Sbjct: 216 RCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 160 M----PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
M +WN G + G AL M ++ + + +GL A + I
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM-RNCNVRIGSVAMINGLKACSHIG 334
Query: 216 CLRLGKEIHGYLVRA---GLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTT 272
L+ GK H ++R+ D+D V ++L+ +Y +C L A +F Q+ + +W +
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVR-NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNS 393
Query: 273 MIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR-V 331
+I + R EE L ++++ SG PN T +L A GKE H Y++R
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF 391
Y ++LVD+Y+K G A RVF+ + + D V++TSLI G+ + G+ + AL +F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 392 ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 451
+ + +SG KPD +T V VLSAC+H+ LV +G F ++ G+ +HY+C++DL R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 452 SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA-LFEIEPENPATYIT 510
+G ++A +I + +P + A+LL C IHGN + + AA+ L E +PE+ Y+
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 511 LANIYANAGQWAEEAKVRKDMEIRGIVK 538
LA++YA G W++ V+ + G+ K
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 193/462 (41%), Gaps = 76/462 (16%)
Query: 70 LYST--LIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFD 127
LYS+ L++ CV G+++HA SS + +L+ Y+ L +AQ + +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE 142
Query: 128 EMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEM 187
WN +I Y+ + R +E++ +
Sbjct: 143 NSEILHPLPWNVLIG-------------------------------SYIRNKRFQESVSV 171
Query: 188 F-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
+ RMM K +++FT S + A AA+ G+ +HG + + + V +AL+ +Y
Sbjct: 172 YKRMMSK--GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 247 GKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
+ G +D AR +FD+M ++D VSW +I+ + + E F L + SGV + T+
Sbjct: 230 KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWN 289
Query: 307 GV-----------------------------------LKACADHAAEHLGKEVHGYMMR- 330
+ LKAC+ A GK H ++R
Sbjct: 290 TIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRS 349
Query: 331 --VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRAL 388
+D + S L+ +YS+C + + A VF Q+ L +W S+I GFA N + +
Sbjct: 350 CSFSHDIDNVRNS-LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDL 448
+ +L SG P+ IT +L G + G E+ I + + ++D+
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 449 LARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
A+SG A+ + D+M K DK + SL+ G G E+A
Sbjct: 469 YAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVA 509
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 5/245 (2%)
Query: 176 VSHGRPREALEMFRMMQKHESSNSNKFTLSSG---LAAAAAIPCLRLGKEIHGYLVRAGL 232
+SHG+ EA F +++ S S++F L S L+ G+++H + + +GL
Sbjct: 57 ISHGQLYEAFRTFSLLRYQ--SGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGL 114
Query: 233 DLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
+ D V+ L+ Y LDEA+ I + + W +I + R +E S+++
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
+M G+R +E+T+ V+KACA G+ VHG + + + +AL+ +Y + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 353 TKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
+A R+F+++ D VSW ++I + + A + + SG + +T+ +
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 413 CTHAG 417
C AG
Sbjct: 295 CLEAG 299
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 223/409 (54%), Gaps = 2/409 (0%)
Query: 138 NTMIAGYAKLGWL-EQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHES 196
+ ++ Y+KL L + +F MP R+ FSWN I + G +++++F M +
Sbjct: 70 SKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESC 129
Query: 197 SNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
+ FTL L A +A + G IH ++ G V SAL+ +Y G L AR
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR 189
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+FD M +D V +T M + G G ++FR++ SG + +L AC
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
A GK VHG+ +R G G+A+ D+Y KC A VF + R D++SW+SLI
Sbjct: 250 ALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLIL 309
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G+ +G + F+ +LK G +P+ +TF+GVLSAC H GLV+K YF ++E + ++
Sbjct: 310 GYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIV 368
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
HYA V D ++R+G EAE +++M +KPD+ + ++L GC+++GN+E+ +R A
Sbjct: 369 PELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARE 428
Query: 497 LFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
L +++P + Y+TLA +Y+ AG++ E +R+ M+ + I K PG S I
Sbjct: 429 LIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 162/397 (40%), Gaps = 68/397 (17%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
RP ++ AC R + G +H L F +F+S+ L+ +Y G L A++
Sbjct: 131 RPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARK 190
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
LFD+M RD + M G YV G
Sbjct: 191 LFDDMPVRDSVLYTAMFGG-------------------------------YVQQGEAMLG 219
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD 244
L MFR M + + + S L A + L+ GK +HG+ +R L + +A+ D
Sbjct: 220 LAMFREM-GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITD 278
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y KC LD A +F M +DV+SW+++I DG F LF +++ G+ PN T
Sbjct: 279 MYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVT 338
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
F GVL ACA HG ++ + LY + +N +
Sbjct: 339 FLGVLSACA-----------HGGLVEKSW------------LYFRLMQE------YNIV- 368
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
P+L + S+ ++ G + A F E KPD+ VLS C G V+ G
Sbjct: 369 -PELKHYASVADCMSRAGLLEEAEKFLE---DMPVKPDEAVMGAVLSGCKVYGNVEVGER 424
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
+ + A +Y + L + +GRF+EAE++
Sbjct: 425 VARELIQLKP--RKASYYVTLAGLYSAAGRFDEAESL 459
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 237/457 (51%), Gaps = 17/457 (3%)
Query: 101 PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLG---WLEQARKLF 157
P ++R L+L +KC SL + +++ ++ L ++ L L A +
Sbjct: 4 PSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSIL 63
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSN-----KFTLSSGLAAAA 212
++P F +N IS VS+ + F + + SS SN +FT S A+
Sbjct: 64 RQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASG 123
Query: 213 -AIPCLRLGKEIHGYLVR--AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS 269
R G+ +H ++++ ++ D V +AL+ Y CG L EAR +F+++ + D+ +
Sbjct: 124 FDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLAT 183
Query: 270 WTTMIH---RCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
W T++ E EE LF M VRPNE + ++K+CA+ G H
Sbjct: 184 WNTLLAAYANSEEIDSDEEVLLLF---MRMQVRPNELSLVALIKSCANLGEFVRGVWAHV 240
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
Y+++ F G++L+DLYSKCG A +VF+++ + D+ + ++I G A +G
Sbjct: 241 YVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQE 300
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
+ ++ L+ G PD TFV +SAC+H+GLVD+GL+ F+S+K +G+ +HY C++
Sbjct: 301 GIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLV 360
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPA 506
DLL RSGR EAE I M +KP+ LW S LG + HG+ E + A L +E EN
Sbjct: 361 DLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSG 420
Query: 507 TYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
Y+ L+NIYA +W + K R+ M+ + K PG S
Sbjct: 421 NYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 159/381 (41%), Gaps = 78/381 (20%)
Query: 53 LKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHA-----LTKSSNFI------- 100
L A+ +L + PS LY+TLI++ V + Q + L+ SNF+
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 101 PGI--------------------------------FISNRLLDLYAKCGSLADAQRLFDE 128
P + F+ L+ YA CG L +A+ LF+
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER 175
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
+ + DL +WNT++A YA ++ DE E L +F
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDS-----DE-----------------------EVLLLF 207
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
MQ N+ +L + + + A + G H Y+++ L L++ V ++L+DLY K
Sbjct: 208 MRMQ----VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSK 263
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
CG L AR +FD+M +DV + MI G +EG L++ L+ G+ P+ TF
Sbjct: 264 CGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVT 323
Query: 309 LKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RP 366
+ AC+ G ++ M V G +P LVDL + G + A ++P +P
Sbjct: 324 ISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKP 383
Query: 367 DLVSWTSLIGGFAQNGQPDRA 387
+ W S +G +G +R
Sbjct: 384 NATLWRSFLGSSQTHGDFERG 404
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 245/477 (51%), Gaps = 24/477 (5%)
Query: 77 ACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCS 136
ACV R + G+ +H+ + + + + L+ +Y KCG + A+++FDEM +R++ +
Sbjct: 56 ACVVPRVV-LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVAT 114
Query: 137 WNTMIAGYAKLGWLEQARKLFDEMPR-RDHFSWNAAISGYVSHGRPREALEMFRMMQKHE 195
WN MI GY G A LF+E+ R+ +W I GY +A E+F M E
Sbjct: 115 WNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM-PFE 173
Query: 196 SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDE---VVWSALLDLYGKCGSL 252
N +++ G+ R ++ + D+ E VWS ++ Y + G +
Sbjct: 174 LKNVKAWSVMLGVYVNN-----RKMEDARKFFE----DIPEKNAFVWSLMMSGYFRIGDV 224
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
EAR IF ++ +D+V W T+I ++G ++ F ++ G G P+ T + +L AC
Sbjct: 225 HEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSAC 284
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWT 372
A +G+EVH + G + F +AL+D+Y+KCG+ + A+ VF I +
Sbjct: 285 AQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCN 344
Query: 373 SLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEK 432
S+I A +G+ AL F + KPD+ITF+ VL+AC H G + +GL+ F +K +
Sbjct: 345 SMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ 404
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKR 492
+ H+ C+I LL RSG+ EA ++ M +KP+ + +LLG C++H + E+A++
Sbjct: 405 D-VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQ 463
Query: 493 A------ANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
A ++ EN +++N+YA+ +W +R +ME RG+ K PG S
Sbjct: 464 VMKIIETAGSITNSYSENHLA--SISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 182/406 (44%), Gaps = 40/406 (9%)
Query: 166 FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHG 225
F + I ++S G P +AL ++ +++ L A A +P + LGK +H
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLIL-RACACVVPRVVLGKLLHS 70
Query: 226 YLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREE 285
++ G+ D +V S+L+ +YGKCG + AR +FD+M +++V +W MI +G
Sbjct: 71 ESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVL 130
Query: 286 GFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE-----------VHGYMMRVGY- 333
LF ++ V N T+ ++K +E V + + +G
Sbjct: 131 ASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVY 187
Query: 334 -----------------DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
+ +F S ++ Y + G+ A +F ++ DLV W +LI
Sbjct: 188 VNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIA 247
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G+AQNG D A+ F + G +PD +T +LSAC +G +D G E HS+ G+
Sbjct: 248 GYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE-VHSLINHRGIE 306
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
+ID+ A+ G A ++ +++S++ S++ IHG + A +
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVFESISVRSVA-CCNSMISCLAIHGKGKEALEMFST 365
Query: 497 L--FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKP 540
+ +++P+ T+I + + G E K+ +M+ + + KP
Sbjct: 366 MESLDLKPDE-ITFIAVLTACVHGGFLMEGLKIFSEMKTQDV--KP 408
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 112/285 (39%), Gaps = 74/285 (25%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P S++++AC + L+ GR VH+L F+SN L+D+YAKCG L +A +
Sbjct: 272 PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSV 331
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
F+ + R + N+MI+ A HG+ +EAL
Sbjct: 332 FESISVRSVACCNSMISCLA-------------------------------IHGKGKEAL 360
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
EMF M+ + ++ T + L A +HG + GL
Sbjct: 361 EMFSTMESLD-LKPDEITFIAVLTAC-----------VHGGFLMEGLK------------ 396
Query: 246 YGKCGSLDEARGIFDQMVDKDVVS----WTTMIHRCFEDGRREEGFSLFRDLMGSGVRPN 301
IF +M +DV + +IH G+ +E + L +++ V+PN
Sbjct: 397 ------------IFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH---VKPN 441
Query: 302 EYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
+ +L AC H + ++V + G S++ + L +
Sbjct: 442 DTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASI 486
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 226/416 (54%), Gaps = 6/416 (1%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR-DHFSWNAAISGYVSHGRPREALEMFR 189
D +C N++++ Y K L A KLF + + +WN + GY + +E+FR
Sbjct: 365 DSTVC--NSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC 249
+Q + + + +S +++ + I + LGK +H Y+V+ LDL V ++L+DLYGK
Sbjct: 423 KIQ-NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKM 481
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
G L A +F + D +V++W MI + E+ +LF ++ +P+ T +L
Sbjct: 482 GDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
AC + + G+ +H Y+ ++ +AL+D+Y+KCG+ + + +F+ + D V
Sbjct: 541 MACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAV 600
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
W +I G+ +G + A+ F+ + +S KP TF+ +LSACTHAGLV++G + F +
Sbjct: 601 CWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM 660
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
++ + HY+C++DLL+RSG EAE+ + +M PD +W +LL C HG E+
Sbjct: 661 -HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEM 719
Query: 490 AKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
R A +P+N YI LAN+Y+ AG+W E + R+ M G+ K+ G S +
Sbjct: 720 GIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 222/464 (47%), Gaps = 47/464 (10%)
Query: 63 VDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADA 122
VD+P+PR AC AL++GR +H + F+ + + Y+K G+ ++A
Sbjct: 225 VDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEA 284
Query: 123 QRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPR 182
F E+GD D+ SW ++IA A+ G +E++ +F EM + IS ++
Sbjct: 285 YLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLIN----- 339
Query: 183 EALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSAL 242
E+ +MM +P GK HG+++R LD V ++L
Sbjct: 340 ---ELGKMM---------------------LVP---QGKAFHGFVIRHCFSLDSTVCNSL 372
Query: 243 LDLYGKCGSLDEARGIFDQMVDK-DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPN 301
L +Y K L A +F ++ ++ + +W TM+ + + LFR + G+ +
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 302 EYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
+ T V+ +C+ A LGK +H Y+++ D ++L+DLY K G+ +A R+F
Sbjct: 433 SASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFC 492
Query: 362 QIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
+ ++++W ++I + Q ++A+ F+ ++ KP IT V +L AC + G +++
Sbjct: 493 E-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC 481
G I E M+ + A +ID+ A+ G ++ + D + K D W ++ G
Sbjct: 552 GQMIHRYITETEHEMNLSLS-AALIDMYAKCGHLEKSRELFDAGNQK-DAVCWNVMISGY 609
Query: 482 RIHGNIELAKRAANALF------EIEPENPATYITLANIYANAG 519
+HG++E +A ALF +++P P T++ L + +AG
Sbjct: 610 GMHGDVE----SAIALFDQMEESDVKPTGP-TFLALLSACTHAG 648
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 182/383 (47%), Gaps = 18/383 (4%)
Query: 140 MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHG-RPREALEMFRMMQKHESSN 198
+I+ YA G + ++F + RRD F WN+ I + S+G R F M+ +S
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS-- 122
Query: 199 SNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR-AGLDLDEVVWSALLDLYGKCGSLDEARG 257
+ FT ++A A + +G +HG +++ G D + V ++ + Y KCG L +A
Sbjct: 123 PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACL 182
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGV---RPNEYTFTGVLKACAD 314
+FD+M D+DVV+WT +I ++G E G + +G +PN T +AC++
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 315 HAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSL 374
A G+ +HG+ ++ G F S++ YSK GN A F ++ D+ SWTS+
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 375 IGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
I A++G + + F + G PD + +++ LV +G + FH +H
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHC 361
Query: 435 LMHTADHYAC--VIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG-----CRIHGNI 487
+ D C ++ + + + AE + +S + +K W ++L G C + I
Sbjct: 362 F--SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK-CI 418
Query: 488 ELAKRAANALFEIEPENPATYIT 510
EL ++ N EI+ + + I+
Sbjct: 419 ELFRKIQNLGIEIDSASATSVIS 441
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 187/427 (43%), Gaps = 38/427 (8%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
DR+ + + Y+K G+L+ A +FDEMP RD +W A ISG+V +G L
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 191 MQKHESS--NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
M S N TL G A + + L+ G+ +HG+ V+ GL + V S++ Y K
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
G+ EA F ++ D+D+ SWT++I G EE F +F ++ G+ P+ + +
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCL 337
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP-D 367
+ GK HG+++R + S ++L+ +Y K +A ++F +I +
Sbjct: 338 INELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397
Query: 368 LVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFH 427
+W +++ G+ + + + F + G + D + V+S+C+H G V G + H
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLG-KSLH 456
Query: 428 SIKEKHGLMHTADHYACVIDLLARSG-------RFNEAE-NII----------------- 462
K L T +IDL + G F EA+ N+I
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEK 516
Query: 463 -----DNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE-NPATYITLAN 513
D M + KP +LL C G++E + + E E E N + L +
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576
Query: 514 IYANAGQ 520
+YA G
Sbjct: 577 MYAKCGH 583
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 6/266 (2%)
Query: 227 LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEG 286
++ GL + V S L+ Y G + + +F + +D+ W ++I F +G
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVD 345
F ++ SG P+ +T V+ ACA+ H+G VHG +++ G+D + G++ V
Sbjct: 110 LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY 169
Query: 346 LYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT---KPD 402
YSKCG + A VF+++P D+V+WT++I G QNG+ + L + + +G+ KP+
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
T AC++ G + +G H K+GL + + + ++SG +EA
Sbjct: 230 PRTLECGFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSF 288
Query: 463 DNMSIKPDKFLWASLLGGCRIHGNIE 488
+ D F W S++ G++E
Sbjct: 289 RELG-DEDMFSWTSIIASLARSGDME 313
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 229/423 (54%), Gaps = 21/423 (4%)
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL-GKEIHGYL 227
N + Y+ G P +AL FR + S + F++ + ++A L G++IH +
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK-DVVSWTTMIHRCFEDGRREEG 286
+ G + + ++L+ Y G +D AR +FD+ +K ++V WT MI E+ E
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMM----RVGYDPGSFAGSA 342
LF+ + + + T L ACAD A +G+E++ + R+ D ++
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT--LRNS 209
Query: 343 LVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELL------LK 396
L+++Y K G T+ A ++F++ R D+ ++TS+I G+A NGQ +L F+ +
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 397 SGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
+ P+ +TF+GVL AC+H+GLV++G +F S+ + L H+ C++DL RSG
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 457 EAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYA 516
+A I+ M IKP+ +W +LLG C +HGN+EL + +FE++ ++ Y+ L+NIYA
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 517 NAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSK 576
+ G W E++K+R + R + PGKSWIE+ ++ F+ G P D +GE+S+
Sbjct: 390 SKGMWDEKSKMRDRVRKR---RMPGKSWIELGSIINEFVSG----PDNNDEQLMMGEISE 442
Query: 577 KMK 579
++
Sbjct: 443 VLR 445
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 165/351 (47%), Gaps = 52/351 (14%)
Query: 53 LKEAVDLLHHVDRPSPR-------LYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFI 105
+K +D H R SP L++ +++ + +L+ GR++HAL + F I I
Sbjct: 45 IKALLDFRHRF-RQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQI 102
Query: 106 SNRLLDLYAKCGSLADAQRLFDEMGDR-DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRD 164
L+ Y+ G + A+++FDE ++ ++ W M
Sbjct: 103 QTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAM------------------------ 138
Query: 165 HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
IS Y + EA+E+F+ M+ E + ++ L+A A + +++G+EI+
Sbjct: 139 -------ISAYTENENSVEAIELFKRMEA-EKIELDGVIVTVALSACADLGAVQMGEEIY 190
Query: 225 GYLVRAG--LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGR 282
++ L +D + ++LL++Y K G ++AR +FD+ + KDV ++T+MI +G+
Sbjct: 191 SRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQ 250
Query: 283 REEGFSLFRDL------MGSGVRPNEYTFTGVLKACADHAAEHLGKE-VHGYMMRVGYDP 335
+E LF+ + + + PN+ TF GVL AC+ GK +M P
Sbjct: 251 AQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKP 310
Query: 336 GSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPD 385
+VDL+ + G+ K A NQ+P +P+ V W +L+G + +G +
Sbjct: 311 REAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
DL N+++ Y K G E+ARKLFDE R+D ++ + I GY +G+ +E+LE+F+ M+
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLG------KEIHGYLVRAGLDLDEVVWSALLDLY 246
+ S T + + C G + ++ L E + ++DL+
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 247 GKCGSLDEARGIFDQM-VDKDVVSWTTMIHRCFEDGRREEG-------FSLFRDLMGSGV 298
+ G L +A +QM + + V W T++ C G E G F L RD +G V
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYV 382
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 217/467 (46%), Gaps = 72/467 (15%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P ++ ++ AC E+GR++H L S + +F+ N L+++Y +
Sbjct: 138 PDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRS--------- 188
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
G+ E ARK+ D MP RD SWN+ +S Y+ G EA
Sbjct: 189 ----------------------GYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEAR 226
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+F M++ + W+ ++
Sbjct: 227 ALFDEMEERNVES----------------------------------------WNFMISG 246
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG-SGVRPNEYT 304
Y G + EA+ +FD M +DVVSW M+ G E +F ++ S +P+ +T
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
VL ACA + G+ VH Y+ + G + F +ALVD+YSKCG A VF
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
+ D+ +W S+I + +G AL F ++ G KP+ ITF+GVLSAC H G++D+ +
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK 426
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
F + + + T +HY C++DLL R G+ EAE +++ + L SLLG C+
Sbjct: 427 LFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRF 486
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDM 531
G +E A+R AN L E+ + + Y ++N+YA+ G+W + R++M
Sbjct: 487 GQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 170/376 (45%), Gaps = 37/376 (9%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYG---KCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
++ H ++++ GL D S L+ + ++ A I +++ + + ++I
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
E ++FR+++ V P++Y+FT VLKACA G+++HG ++ G
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
F + LV++Y + G +IA +V +++P D VSW SL+ + + G D A F+ + +
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEER 235
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
+ ++ ++S AGLV + E F S+ + + A ++ A G +NE
Sbjct: 236 NVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNA-----MVTAYAHVGCYNE 286
Query: 458 A----ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITL 511
++D+ + KPD F S+L C G++ + + + IE E L
Sbjct: 287 VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLA-TAL 345
Query: 512 ANIYANAGQWAEEAKVRKDMEI-RGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEF 570
++Y+ G K+ K +E+ R K+ +W I + V +G +D E
Sbjct: 346 VDMYSKCG------KIDKALEVFRATSKRDVSTWNSIISDLSVHGLG-------KDALEI 392
Query: 571 LGELSKKMKEEGYVPD 586
E M EG+ P+
Sbjct: 393 FSE----MVYEGFKPN 404
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 237/473 (50%), Gaps = 34/473 (7%)
Query: 103 IFISNRLLDLYAK-CGSLADAQRLFDEM---GDRDLCSWNTMIAGYAKLGWLEQARKL-- 156
+F R L L + +L A+++ ++ G D + +I Y E + KL
Sbjct: 4 VFPGPRFLSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAH 63
Query: 157 ---FDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS---NSNKFTLSSGLAA 210
F D F +N + +P +++ +F S N F G A
Sbjct: 64 LLVFPRFGHPDKFLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACA 119
Query: 211 AAAIPC-LRLGKEIHGYLVRAG-LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV 268
+A LR+G+ +HG + + G L E++ + LL Y K G L AR +FD+M ++ V
Sbjct: 120 RSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSV 179
Query: 269 SWTTMI-----HRCFEDGRREEGFSLFRDL--MGSGVRPNEYTFTGVLKACADHAAEHLG 321
+W MI H+ + + LFR GSGVRP + T VL A + +G
Sbjct: 180 TWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG 239
Query: 322 KEVHGYMMRVGYDP--GSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFA 379
VHGY+ ++G+ P F G+ALVD+YSKCG A VF + ++ +WTS+ G A
Sbjct: 240 SLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLA 299
Query: 380 QNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTA 439
NG+ + + + +SG KP++ITF +LSA H GLV++G+E F S+K + G+
Sbjct: 300 LNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVI 359
Query: 440 DHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE 499
+HY C++DLL ++GR EA I M IKPD L SL C I+G + + AL E
Sbjct: 360 EHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLE 419
Query: 500 IEPENPAT-------YITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
IE E+ Y+ L+N+ A+ G+W E K+RK+M+ R I +PG S++
Sbjct: 420 IEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 139/306 (45%), Gaps = 32/306 (10%)
Query: 84 LEQGRRVHALTKSSNFI-PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIA 142
L GR VH + K F+ I LL YAK G L A+++FDEM +R +WN MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 143 GYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS-NSNK 201
GY +D + NA R+A+ +FR S
Sbjct: 187 GYCS---------------HKDKGNHNA-----------RKAMVLFRRFSCCGSGVRPTD 220
Query: 202 FTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL--DLDEVVWSALLDLYGKCGSLDEARGIF 259
T+ L+A + L +G +HGY+ + G ++D + +AL+D+Y KCG L+ A +F
Sbjct: 221 TTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVF 280
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEH 319
+ M K+V +WT+M +GR E +L + SG++PNE TFT +L A
Sbjct: 281 ELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVE 340
Query: 320 LGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
G E+ M R G P +VDL K G + A + +P +PD + SL
Sbjct: 341 EGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNA 400
Query: 378 FAQNGQ 383
+ G+
Sbjct: 401 CSIYGE 406
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 231/448 (51%), Gaps = 36/448 (8%)
Query: 148 GWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSG 207
G ++ A K ++ ++ WN I G+ + P +++ ++ M + + T
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF-GLLPDHMTYPFL 114
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDE------------------------------- 236
+ +++ + +LG +H +V++GL+ D
Sbjct: 115 MKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL 174
Query: 237 VVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS 296
V W+++LD Y K G + AR +FD+M ++DVV+W++MI + G + +F +M
Sbjct: 175 VTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM 234
Query: 297 GV-RPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKI 355
G + NE T V+ ACA A + GK VH Y++ V ++L+D+Y+KCG+
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGD 294
Query: 356 ASRVFNQ--IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC 413
A VF + + D + W ++IGG A +G +L F + +S PD+ITF+ +L+AC
Sbjct: 295 AWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAAC 354
Query: 414 THAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL 473
+H GLV + +F S+KE G ++HYAC++D+L+R+G +A + I M IKP +
Sbjct: 355 SHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSM 413
Query: 474 WASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEI 533
+LL GC HGN+ELA+ L E++P N Y+ LAN+YA Q+ +R+ ME
Sbjct: 414 LGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEK 473
Query: 534 RGIVKKPGKSWIEIKRQVHVFLVGDTSH 561
+G+ K G S +++ H F+ D +H
Sbjct: 474 KGVKKIAGHSILDLDGTRHRFIAHDKTH 501
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 3/346 (0%)
Query: 45 NALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIF 104
N+ +K + + +L P Y L+ + R + G +H S +F
Sbjct: 85 NSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLF 144
Query: 105 ISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRD 164
I N L+ +Y A A++LFDEM ++L +WN+++ YAK G + AR +FDEM RD
Sbjct: 145 ICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERD 204
Query: 165 HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
+W++ I GYV G +ALE+F M + SS +N+ T+ S + A A + L GK +H
Sbjct: 205 VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH 264
Query: 225 GYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF--DQMVDKDVVSWTTMIHRCFEDGR 282
Y++ L L ++ ++L+D+Y KCGS+ +A +F + + D + W +I G
Sbjct: 265 RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGF 324
Query: 283 REEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSA 342
E LF + S + P+E TF +L AC+ + G +P S +
Sbjct: 325 IRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYAC 384
Query: 343 LVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNGQPDRA 387
+VD+ S+ G K A +++P +P +L+ G +G + A
Sbjct: 385 MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/528 (28%), Positives = 258/528 (48%), Gaps = 15/528 (2%)
Query: 35 KTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALT 94
K + + L + L A+DL + ++T+I+ V E G RV
Sbjct: 68 KNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDM 127
Query: 95 KSSNFIPGIFISNRLLDLY--AKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQ 152
+ P F + L L + G + + +L WN+++ Y +LG +
Sbjct: 128 QRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDY 187
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
A +F M RD SWN I G AL+ F +M++ E +++T+S ++ +
Sbjct: 188 ALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEI-QPDEYTVSMVVSICS 246
Query: 213 AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTT 272
+ L GK+ ++ G + +V A +D++ KC LD++ +F ++ D V +
Sbjct: 247 DLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNS 306
Query: 273 MI-----HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
MI H C ED R LF M VRP+++TF+ VL + +H G +VH
Sbjct: 307 MIGSYSWHCCGEDALR-----LFILAMTQSVRPDKFTFSSVLSSMNAVMLDH-GADVHSL 360
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRA 387
++++G+D + ++L+++Y K G+ +A VF + DL+ W ++I G A+N + +
Sbjct: 361 VIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVES 420
Query: 388 LHFF-ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
L F +LL+ KPD++T +G+L AC +AG V++G++ F S+++ HG+ +HYAC+I
Sbjct: 421 LAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACII 480
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPA 506
+LL R G NEA++I D + +P +W +L G+ LA+ A + E EP++
Sbjct: 481 ELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSF 540
Query: 507 TYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVF 554
Y+ L IY +W K+R M + G S I I+ V F
Sbjct: 541 PYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 231/475 (48%), Gaps = 38/475 (8%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
PS +S L+ + ++ + VHA + F+ + NR L LY K GS+ +A +L
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
FD++ D++ +WN + G K G+L A LFDEMP RD SWN ISG VS G +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD-LDEVVWSALLD 244
+F MQ+ E +FT S A+ + C+R G++IHG + +G+ + VVW++++D
Sbjct: 122 RVFFDMQRWE-IRPTEFTFS---ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMD 177
Query: 245 LYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYT 304
+Y + G D A +F M D+DVVSW +I C + G +E F + ++P+EYT
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYT 237
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP 364
+ V+ C+D GK+ +++G+ S A +D++SKC + ++F ++
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE 297
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLS----------ACT 414
+ D V S+IG ++ + + AL F L + +PD+ TF VLS A
Sbjct: 298 KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADV 357
Query: 415 HAGLVDKGLE------------YFH--SIKEKHGLMHTAD-----HYACVIDLLARSGRF 455
H+ ++ G + YF S+ G+ D + VI LAR+ R
Sbjct: 358 HSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRA 417
Query: 456 NEAENIID----NMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPA 506
E+ I + N S+KPD+ +L C G + + +++ + NP
Sbjct: 418 VESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPG 472
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 203/391 (51%), Gaps = 36/391 (9%)
Query: 289 LFRD---LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVD 345
L++D L+ G P+ F + ++CA+ + K+VH + ++ + + ++
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVIS 279
Query: 346 LYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
++ +C + A RVF+ + D+ SW ++ ++ NG D ALH FE + K G KP++ T
Sbjct: 280 MFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEET 339
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
F+ V AC G +++ +F S+K +HG+ +HY V+ +L + G EAE I ++
Sbjct: 340 FLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDL 399
Query: 466 SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEA 525
+P W ++ R+HG+I+L + +++P
Sbjct: 400 PFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAV------------------- 440
Query: 526 KVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEG--Y 583
I I P KS+ E + + + R++ + E + ++G Y
Sbjct: 441 -------INKIPTPPPKSFKETN-----MVTSKSRILEFRNLTFYKDEAKEMAAKKGVVY 488
Query: 584 VPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKY 643
VPDT FVLHD+++E KEQ L YHSE+LA+A+GII TPP + + KNLR C DCH +K
Sbjct: 489 VPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKI 548
Query: 644 TSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
SKI+ R +I+RD+ RFH F+DG CSC DYW
Sbjct: 549 MSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 67/119 (56%)
Query: 42 EAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIP 101
E + LCQ++ K+A++LL P + L +C ++LE ++VH S F
Sbjct: 210 EEVMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG 269
Query: 102 GIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM 160
++N ++ ++ +C S+ DA+R+FD M D+D+ SW+ M+ Y+ G + A LF+EM
Sbjct: 270 DPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 61/104 (58%)
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS 269
+ A + L K++H + +++ D + + ++ ++G+C S+ +A+ +FD MVDKD+ S
Sbjct: 245 SCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDS 304
Query: 270 WTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACA 313
W M+ ++G ++ LF ++ G++PNE TF V ACA
Sbjct: 305 WHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACA 348
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 225/418 (53%), Gaps = 15/418 (3%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
+ +L + +I+ YAK G A K F+ +P +D ++NA GY G +A ++++
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M+ H ++ T+ L A G ++G +++ G D + V AL++++ KC
Sbjct: 493 MKLHGVCPDSR-TMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCD 551
Query: 251 SLDEARGIFDQM-VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVL 309
+L A +FD+ +K VSW M++ G+ EE + FR + +PN TF ++
Sbjct: 552 ALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIV 611
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
+A A+ +A +G VH +++ G+ + G++LVD+Y+KCG + + + F +I +V
Sbjct: 612 RAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIV 671
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
SW +++ +A +G A+ F + ++ KPD ++F+ VLSAC HAGLV++G F +
Sbjct: 672 SWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEM 731
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
E+H + +HYAC++DLL ++G F EA ++ M +K +W +LL R+H N+ L
Sbjct: 732 GERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWL 791
Query: 490 AKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEI 547
+ A L ++EP NP+ Y +++ ++ + + I K P SWIE+
Sbjct: 792 SNAALCQLVKLEPLNPSHY-------------SQDRRLGEVNNVSRIKKVPACSWIEV 836
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 226/503 (44%), Gaps = 46/503 (9%)
Query: 44 INALCQQKRLKEAVDLLHH-----VDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
++ L Q A+ L H VD LY+ LI A + + R +H L
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYN-LIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFD 158
FI S+ L+D+Y C L A+ +F+E+ W
Sbjct: 232 FIFAF--SSGLIDMYCNCADLYAAESVFEEV-------------------W--------- 261
Query: 159 EMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
R+D SW ++ Y +G E LE+F +M+ ++ NK +S L AAA + L
Sbjct: 262 ---RKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDV-RMNKVAAASALQAAAYVGDLV 317
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCF 278
G IH Y V+ GL D V ++L+ +Y KCG L+ A +F + D+DVVSW+ MI
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYE 377
Query: 279 EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF 338
+ G+ +E SLFRD+M ++PN T T VL+ CA AA LGK +H Y ++ +
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 339 AGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
+A++ +Y+KCG A + F ++P D V++ +L G+ Q G ++A ++ + G
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
PD T VG+L C +G + I KHG +I++ + A
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQII-KHGFDSECHVAHALINMFTKCDALAAA 556
Query: 459 ENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANA 518
+ D + W ++ G +HG E A + ++E P +T NI A
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM-KVEKFQPNA-VTFVNIVRAA 614
Query: 519 GQWAEEAKVRKDMEIRGIVKKPG 541
AE + +R M + + + G
Sbjct: 615 ---AELSALRVGMSVHSSLIQCG 634
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 212/492 (43%), Gaps = 72/492 (14%)
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAG 143
L +G +H I + ++ L+ +Y+KCG L A++LF + DRD+ SW+ MIA
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 144 YAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
Y + G ++A LF +M R H +P N T
Sbjct: 376 YEQAGQHDEAISLFRDMMR--------------IHIKP------------------NAVT 403
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
L+S L A + RLGK IH Y ++A ++ + +A++ +Y KCG A F+++
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 264 DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE 323
KD V++ + + G + F +++++ GV P+ T G+L+ CA + G
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 324 VHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGGFAQNG 382
V+G +++ G+D AL+++++KC A +F++ VSW ++ G+ +G
Sbjct: 524 VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
Q + A+ F + +P+ +TFV ++ A + G+ HS + G
Sbjct: 584 QAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMS-VHSSLIQCGFCSQTPVG 642
Query: 443 ACVIDLLARSGRFNEAENIIDNMS----------------------------------IK 468
++D+ A+ G +E +S +K
Sbjct: 643 NSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFE---IEPENPATYITLANIYANAGQWAEEA 525
PD + S+L CR G +E KR + E IE E Y + ++ AG + E
Sbjct: 703 PDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAE-VEHYACMVDLLGKAGLFGEAV 761
Query: 526 KVRKDMEIRGIV 537
++ + M ++ V
Sbjct: 762 EMMRRMRVKTSV 773
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 179/404 (44%), Gaps = 37/404 (9%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P ++ + AC ++G R+H L ++I L+++Y K
Sbjct: 98 PDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKA--------- 148
Query: 126 FDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREAL 185
RDL S AR++FD+M +D +WN +SG +G AL
Sbjct: 149 ------RDLVS----------------ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAAL 186
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
+F M+ + + +L + + A + + + + +HG +++ G S L+D+
Sbjct: 187 LLFHDMRSC-CVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDM 243
Query: 246 YGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
Y C L A +F+++ KD SW TM+ +G EE LF + VR N+
Sbjct: 244 YCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAA 303
Query: 306 TGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR 365
L+A A G +H Y ++ G ++L+ +YSKCG +IA ++F I
Sbjct: 304 ASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED 363
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL-E 424
D+VSW+++I + Q GQ D A+ F +++ KP+ +T VL C AG+ L +
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC--AGVAASRLGK 421
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK 468
H K + + VI + A+ GRF+ A + + IK
Sbjct: 422 SIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 202/489 (41%), Gaps = 62/489 (12%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N +I Y+ + +R +FD + WN+ I GY G REAL F M + +
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
+ +K++ + L A A + G IH + GL+ D + +AL+++Y K L AR
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 258 IFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
+FD+M KDVV+W TM+ ++G LF D+ V + + ++ A +
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK 216
Query: 318 EHLGKEVHGYMMRVGYDPGSFA-GSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
+ + +HG +++ G+ FA S L+D+Y C + A VF ++ R D SW +++
Sbjct: 217 SDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMA 273
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
+A NG + L F+L+ + +++ L A + G + KG+ H + GL+
Sbjct: 274 AYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA-IHDYAVQQGLI 332
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMS------------------------------ 466
++ + ++ G AE + N+
Sbjct: 333 GDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Query: 467 ----IKPDKFLWASLLGGCRIHGNIELAKR----AANALFEIEPENPATYITLANIYANA 518
IKP+ S+L GC L K A A E E E I++ YA
Sbjct: 393 MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISM---YAKC 449
Query: 519 GQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKM 578
G+++ K + + I+ V F + +I D ++ ++ K M
Sbjct: 450 GRFSPALKAFERLPIKDAV---------------AFNALAQGYTQIGDANKAF-DVYKNM 493
Query: 579 KEEGYVPDT 587
K G PD+
Sbjct: 494 KLHGVCPDS 502
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P+ + ++ A AL G VH+ F + N L+D+YAKCG + +++
Sbjct: 601 QPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEK 660
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISGYVSHGR 180
F E+ ++ + SWNTM++ YA G A LF M + D S+ + +S G
Sbjct: 661 CFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGL 720
Query: 181 PREALEMFRMM-QKHE 195
E +F M ++H+
Sbjct: 721 VEEGKRIFEEMGERHK 736
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 221/430 (51%), Gaps = 38/430 (8%)
Query: 151 EQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
+ A ++F + + +NA I Y G P E+L F M K ++++T + L +
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM-KSRGIWADEYTYAPLLKS 111
Query: 211 AAAIPCLRLGKEIHGYLVRAGLD-------------------------LDE------VVW 239
+++ LR GK +HG L+R G DE VVW
Sbjct: 112 CSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVW 171
Query: 240 SALLDLYGKCGSLDEARGI--FDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
+ L + G C S D RG+ F QM ++ +VSW +MI + GR E LF +++ G
Sbjct: 172 N--LMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG 229
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG-YDPGSFAGSALVDLYSKCGNTKIA 356
P+E T VL A GK +H G + G+ALVD Y K G+ + A
Sbjct: 230 FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAA 289
Query: 357 SRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG-TKPDQITFVGVLSACTH 415
+ +F ++ R ++VSW +LI G A NG+ + + F+ +++ G P++ TF+GVL+ C++
Sbjct: 290 TAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSY 349
Query: 416 AGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWA 475
G V++G E F + E+ L +HY ++DL++RSGR EA + NM + + +W
Sbjct: 350 TGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWG 409
Query: 476 SLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
SLL CR HG+++LA+ AA L +IEP N Y+ L+N+YA G+W + KVR M+
Sbjct: 410 SLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNR 469
Query: 536 IVKKPGKSWI 545
+ K G+S I
Sbjct: 470 LRKSTGQSTI 479
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 162/316 (51%), Gaps = 5/316 (1%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y+ L+ +C L G+ VH + F I +++LY G + DAQ++FDEM
Sbjct: 105 YAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMS 164
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
+R++ WN MI G+ G +E+ LF +M R SWN+ IS GR REALE+F
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV-VWSALLDLYGKC 249
M + + ++ T+ + L +A++ L GK IH +GL D + V +AL+D Y K
Sbjct: 225 MID-QGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 250 GSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTGV 308
G L+ A IF +M ++VVSW T+I +G+ E G LF ++ G V PNE TF GV
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGV 343
Query: 309 LKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RP 366
L C+ G+E+ G MM R + + A+VDL S+ G A + +P
Sbjct: 344 LACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA 403
Query: 367 DLVSWTSLIGGFAQNG 382
+ W SL+ +G
Sbjct: 404 NAAMWGSLLSACRSHG 419
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 146/335 (43%), Gaps = 40/335 (11%)
Query: 222 EIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE-D 280
EIH +L+R L ++ + + + G + D A +F + + +V+ + MI +C+
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMI-KCYSLV 80
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
G E S F + G+ +EYT+ +LK+C+ + GK VHG ++R G+
Sbjct: 81 GPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 341 SALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL------- 393
+V+LY+ G A +VF+++ ++V W +I GF +G +R LH F+
Sbjct: 141 IGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV 200
Query: 394 ------------------------LLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
++ G PD+ T V VL G++D G ++ HS
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG-KWIHST 259
Query: 430 KEKHGLMHTADHYA-CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
E GL ++D +SG A I M + + W +L+ G ++G E
Sbjct: 260 AESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGE 318
Query: 489 LAKRAANALFE---IEPENPATYITLANIYANAGQ 520
+A+ E + P N AT++ + + GQ
Sbjct: 319 FGIDLFDAMIEEGKVAP-NEATFLGVLACCSYTGQ 352
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 257/529 (48%), Gaps = 59/529 (11%)
Query: 64 DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKC----GSL 119
DR + R L C R L+Q +HA + + + + L+ Y+ G+L
Sbjct: 8 DRTTNRRRPKLWQNCKNIRTLKQ---IHASMVVNGLMSNLSVVGELI--YSASLSVPGAL 62
Query: 120 ADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAI--- 172
A +LFDE+ D+ N ++ G A+ E+ L+ EM +R D +++ +
Sbjct: 63 KYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKAC 122
Query: 173 -------SGYVSHGR-----------PREALEMFRMMQKHESSNSNKFTLSSGL-AAAAA 213
+G+ HG+ + AL +F +N ++S L +A
Sbjct: 123 SKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFH-------ANCGDLGIASELFDDSAK 175
Query: 214 IPCLRLGKEIHGYLVRAGLD-----------LDEVVWSALLDLYGKCGSLDEARGIFDQM 262
+ GY R +D D+V W+ ++ KC +D AR +FD+
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 263 VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
+KDVV+W MI G +E +F+++ +G P+ T +L ACA GK
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGK 295
Query: 323 EVHGYMMRVGYDPGS-FAGS----ALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
+H Y++ S + G+ AL+D+Y+KCG+ A VF + DL +W +LI G
Sbjct: 296 RLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVG 355
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
A + + ++ FE + + P+++TF+GV+ AC+H+G VD+G +YF +++ + +
Sbjct: 356 LALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEP 414
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL 497
HY C++D+L R+G+ EA +++M I+P+ +W +LLG C+I+GN+EL K A L
Sbjct: 415 NIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKL 474
Query: 498 FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
+ + Y+ L+NIYA+ GQW KVRK + + K G S IE
Sbjct: 475 LSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 246/482 (51%), Gaps = 36/482 (7%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNF-IPGIFISNRLLDLYAKCGSLADAQRLFDEM 129
Y +I C R + +G+++H+L S + I IF++N L+D Y+ CG L+ + R F+ +
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV 275
Query: 130 GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFR 189
++D+ SWN++++ A G + + LF +M W R ++ F
Sbjct: 276 PEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ-----FWG-----------KRPSIRPFM 319
Query: 190 MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV-VWSALLDLYGK 248
S NS+ ++ GK+IH Y+++ G D+ + V SAL+D+YGK
Sbjct: 320 SFLNFCSRNSD----------------IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGK 363
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
C ++ + ++ + ++ +++ G ++ +F ++ G +E T + V
Sbjct: 364 CNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTV 423
Query: 309 LKACADHAAE--HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
LKA + E H VH ++ GY +L+D Y+K G +++ +VF+++ P
Sbjct: 424 LKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTP 483
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
++ TS+I G+A+NG + + + PD++T + VLS C+H+GLV++G F
Sbjct: 484 NIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIF 543
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
S++ K+G+ YAC++DLL R+G +AE ++ D W+SLL CRIH N
Sbjct: 544 DSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRN 603
Query: 487 IELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
+ +RAA L +EPEN A YI ++ Y G + ++R+ R ++++ G S +
Sbjct: 604 ETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVV 663
Query: 547 IK 548
+K
Sbjct: 664 VK 665
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 181/421 (42%), Gaps = 40/421 (9%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
R S + ++++ C +G +VH S F +F+ + L+ LYA C L D
Sbjct: 109 RESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDV-- 165
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
A KLFDEM R+ N + + G +
Sbjct: 166 ----------------------------ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRL 197
Query: 185 LEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV-VWSALL 243
E++ M+ E N T + + + GK++H +V++G ++ + V + L+
Sbjct: 198 FEVYLRMEL-EGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLV 256
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
D Y CG L + F+ + +KDV+SW +++ C + G + LF + G RP+
Sbjct: 257 DYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIR 316
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF-AGSALVDLYSKCGNTKIASRVFNQ 362
F L C+ ++ GK++H Y++++G+D S SAL+D+Y KC + ++ ++
Sbjct: 317 PFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQS 376
Query: 363 IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
+P +L SL+ G + F L++ GT D++T VL A + + + +
Sbjct: 377 LPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS--LPES 434
Query: 423 L---EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLG 479
L H K G +ID +SG+ + + D + P+ F S++
Sbjct: 435 LHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD-TPNIFCLTSIIN 493
Query: 480 G 480
G
Sbjct: 494 G 494
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 9/326 (2%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N I K G L A + FDEM RD ++N ISG +G A+E++ M
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
S T S L+ + R G ++H ++ G + V SAL+ LY +D A
Sbjct: 110 ESAS-TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALK 168
Query: 258 IFDQMVDKDVVSWTTMIHRCF-EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+FD+M+D++ ++ ++ RCF + G + F ++ + GV N T+ +++ C+
Sbjct: 169 LFDEMLDRN-LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDR 227
Query: 317 AEHLGKEVHGYMMRVGYDPGS-FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
+ GK++H +++ G++ + F + LVD YS CG+ + R FN +P D++SW S++
Sbjct: 228 LVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIV 287
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
A G +L F + G +P F+ L+ C+ + G + H K G
Sbjct: 288 SVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG-KQIHCYVLKMGF 346
Query: 436 MHTADHY-ACVIDLLARSGRFNEAEN 460
++ H + +ID+ G+ N EN
Sbjct: 347 DVSSLHVQSALIDMY---GKCNGIEN 369
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 140/316 (44%), Gaps = 37/316 (11%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF-IPGIFISNRLLDLYAKCGSLADAQ 123
RPS R + + + C R+ ++ G+++H F + + + + L+D+Y KC
Sbjct: 312 RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNG----- 366
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
+E + L+ +P + N+ ++ + G ++
Sbjct: 367 --------------------------IENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAA-AAAIP-CLRLGKEIHGYLVRAGLDLDEVVWSA 241
+EMF +M E + ++ TLS+ L A + ++P L +H +++G D V +
Sbjct: 401 IIEMFGLMID-EGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCS 459
Query: 242 LLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPN 301
L+D Y K G + +R +FD++ ++ T++I+ +G + + R++ + P+
Sbjct: 460 LIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPD 519
Query: 302 EYTFTGVLKACADHAAEHLGKEVHGYM-MRVGYDPGSFAGSALVDLYSKCGNTKIASRVF 360
E T VL C+ G+ + + + G PG + +VDL + G + A R+
Sbjct: 520 EVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLL 579
Query: 361 NQI-PRPDLVSWTSLI 375
Q D V+W+SL+
Sbjct: 580 LQARGDADCVAWSSLL 595
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 17/248 (6%)
Query: 248 KCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG 307
K G+L A FD+M +DVV++ +I G L+ +++ G+R + TF
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 308 VLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPD 367
VL C+D G +VH ++ +G+ F SALV LY+ +A ++F+++ +
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 368 LVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFH 427
L L+ F Q G+ R + + G + +T+ ++ C+H LV +G + H
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG-KQLH 236
Query: 428 SIKEKHGLMHT--------ADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLG 479
S+ K G + D+Y+ DL FN + D W S++
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP--------EKDVISWNSIVS 288
Query: 480 GCRIHGNI 487
C +G++
Sbjct: 289 VCADYGSV 296
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 212/413 (51%), Gaps = 39/413 (9%)
Query: 168 WNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGY 226
+N I Y++ G + +L +F M+ H N T S + AA + + G +HG
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASH--VQPNNLTFPSLIKAACSSFSVSYGVALHGQ 111
Query: 227 LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD---------------------- 264
++ G D V ++ + YG+ G L+ +R +FD +++
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 265 ---------KDVVSWTTMIHRCFEDGRREEGFSLFRDLMG---SGVRPNEYTFTGVLKAC 312
DVVSWTT+I+ + G + +F +++ + + PNE TF VL +C
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 313 A--DHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS 370
A D LGK++HGY+M + G+AL+D+Y K G+ ++A +F+QI + +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK 430
W ++I A NG+P +AL FE++ S P+ IT + +L+AC + LVD G++ F SI
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 431 EKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELA 490
++ ++ T++HY CV+DL+ R+G +A N I ++ +PD + +LLG C+IH N EL
Sbjct: 352 SEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELG 411
Query: 491 KRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKS 543
L ++P++ Y+ L+ A W+E K+RK M GI K P S
Sbjct: 412 NTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 13/382 (3%)
Query: 9 IRRAFSSSSQFRHDXXXXXXXXXXXA---KTNNNFEEAINALCQQKRLKEAVDLLHHV-- 63
++R SS+Q + A KT + I + K ++ L H+
Sbjct: 20 LQRFLYSSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLA 79
Query: 64 --DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLAD 121
+P+ + +LI A ++ G +H F+ F+ + Y + G L
Sbjct: 80 SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLES 139
Query: 122 AQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRP 181
++++FD++ + + + N+++ + G ++ A + F MP D SW I+G+ G
Sbjct: 140 SRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLH 199
Query: 182 REALEMFRMMQKHESS--NSNKFTLSSGLAAAAAIP--CLRLGKEIHGYLVRAGLDLDEV 237
+AL +F M ++E + N+ T S L++ A +RLGK+IHGY++ + L
Sbjct: 200 AKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTT 259
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
+ +ALLD+YGK G L+ A IFDQ+ DK V +W +I +GR ++ +F + S
Sbjct: 260 LGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSY 319
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIA 356
V PN T +L ACA LG ++ + P S +VDL + G A
Sbjct: 320 VHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDA 379
Query: 357 SRVFNQIP-RPDLVSWTSLIGG 377
+ +P PD +L+G
Sbjct: 380 ANFIQSLPFEPDASVLGALLGA 401
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 215/417 (51%), Gaps = 3/417 (0%)
Query: 129 MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMF 188
+G +C + ++ Y+K G + +A KLF +P D WN I GY G + + +F
Sbjct: 137 LGFDQICG-SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF 195
Query: 189 RMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGK 248
+MQ H N +T+ + + L + +H + ++ LD V AL+++Y +
Sbjct: 196 NLMQ-HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSR 254
Query: 249 CGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGV 308
C + A +F+ + + D+V+ +++I G +E LF +L SG +P+ V
Sbjct: 255 CMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIV 314
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDL 368
L +CA+ + GKEVH Y++R+G + SAL+D+YSKCG K A +F IP ++
Sbjct: 315 LGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNI 374
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
VS+ SLI G +G A F +L+ G PD+ITF +L C H+GL++KG E F
Sbjct: 375 VSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFER 434
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
+K + G+ +HY ++ L+ +G+ EA + ++ D + +LL C +H N
Sbjct: 435 MKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTH 494
Query: 489 LAKRAANALFEIEPENPATY-ITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
LA+ A + + E + Y + L+N+YA G+W E ++R + K PG SW
Sbjct: 495 LAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 13/341 (3%)
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT---LSS 206
L ARKLFD P R F WN+ I Y + L +F + + ++ N FT L+
Sbjct: 56 LISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDN-FTYACLAR 114
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
G + + LR IHG + +GL D++ SA++ Y K G + EA +F + D D
Sbjct: 115 GFSESFDTKGLRC---IHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPD 171
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
+ W MI G ++G +LF + G +PN YT + D + + VH
Sbjct: 172 LALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHA 231
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
+ +++ D S+ G ALV++YS+C A VFN I PDLV+ +SLI G+++ G
Sbjct: 232 FCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKE 291
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
ALH F L SG KPD + VL +C G E HS + GL + +I
Sbjct: 292 ALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKE-VHSYVIRLGLELDIKVCSALI 350
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFL--WASLLGGCRIHG 485
D+ ++ G A ++ + P+K + + SL+ G +HG
Sbjct: 351 DMYSKCGLLKCAMSLFAGI---PEKNIVSFNSLILGLGLHG 388
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 157/374 (41%), Gaps = 27/374 (7%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
+++H ++ ++ L D + L Y L AR +FD ++ V W ++I +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
+ SLF ++ S RP+ +T+ + + ++ + +HG + G G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 341 SALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTK 400
SA+V YSK G AS++F IP PDL W +I G+ G D+ ++ F L+ G +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 401 PDQITFVGVLSACTHAGLVDKGLEY----FHSIKEKHGLMHTADHYACVIDLLARSGRFN 456
P+ T V + S GL+D L H+ K L + ++++ +R
Sbjct: 205 PNCYTMVALTS-----GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 457 EAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYA 516
A ++ +++S +PD +SL+ G GN K A + E+ L I
Sbjct: 260 SACSVFNSIS-EPDLVACSSLITGYSRCGN---HKEALHLFAELRMSGKKPDCVLVAIV- 314
Query: 517 NAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSK 576
G AE + E+ V + G +E+ +V L+ D++ G L
Sbjct: 315 -LGSCAELSDSVSGKEVHSYVIRLG---LELDIKVCSALI---------DMYSKCGLLKC 361
Query: 577 KMKEEGYVPDTNFV 590
M +P+ N V
Sbjct: 362 AMSLFAGIPEKNIV 375
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 203/368 (55%), Gaps = 18/368 (4%)
Query: 308 VLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
+ + C D A K VH ++ VG S A ++++++YS CG+ + A VFN +P
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDIS-AYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
+L +W +I FA+NGQ + A+ F + G KPD F + AC G +++GL +F
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
S+ +++G++ +HY ++ +LA G +EA +++M +P+ LW +L+ R+HG+
Sbjct: 306 ESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGD 363
Query: 487 IELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
+ L R + + +++ + N + AG ++ +++ + K P
Sbjct: 364 LILGDRCQDMVEQLDA-------SRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYG--- 413
Query: 547 IKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYH 606
+ GD S P+ R+++ L L + M E GYVP + LHDV++E K++NLF H
Sbjct: 414 ----IRYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNH 469
Query: 607 SEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDG 666
+E+ A + TP + I+V KNLR C DCH A+K SKIV R++I RD+ RFH +DG
Sbjct: 470 NERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDG 529
Query: 667 SCSCKDYW 674
CSC++YW
Sbjct: 530 VCSCREYW 537
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 70/123 (56%), Gaps = 10/123 (8%)
Query: 42 EAINALCQQKRLKEAVDLL-------HHVDRPSPRLYSTLIAACVRHRALEQGRRVHALT 94
+ ++++C++ ++K+AV+++ + VD P RL+ + C +AL++ + VH
Sbjct: 151 DELDSICREGKVKKAVEIIKSWRNEGYVVDLP--RLF-WIAQLCGDAQALQEAKVVHEFI 207
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQAR 154
SS I I N ++++Y+ CGS+ DA +F+ M +R+L +W +I +AK G E A
Sbjct: 208 TSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAI 267
Query: 155 KLF 157
F
Sbjct: 268 DTF 270
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 191/365 (52%), Gaps = 11/365 (3%)
Query: 310 KACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV 369
K C + K VHG + + L+++YS CG A+ VF ++ +L
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
+W +I FA+NG + A+ F + G PD F G+ AC G VD+GL +F S+
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
+G+ + + Y ++++ A G +EA ++ M ++P+ +W +L+ R+HGN+EL
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 490 AKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKR 549
A + ++P T N + G +A D+E + K+ G +K
Sbjct: 442 GDYCAEVVEFLDP-------TRLNKQSREGFIPVKAS---DVEKESLKKRSG-ILHGVKS 490
Query: 550 QVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEK 609
+ F GDT+ P+ ++ + L L M E GYV +T LHD+++E KE L HSE+
Sbjct: 491 SMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSER 550
Query: 610 LAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCS 669
+A A ++++ P P V KNLR CVDCH A+K S IV R++I RD RFH ++G+C+
Sbjct: 551 IAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACT 610
Query: 670 CKDYW 674
CKDYW
Sbjct: 611 CKDYW 615
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHR 276
L+ K +HG + + LD LL++Y CG +EA +F++M +K++ +W +I R
Sbjct: 270 LQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIII-R 328
Query: 277 CF-EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACA-----DHAAEHLGKEVHGYMMR 330
CF ++G E+ +F G P+ F G+ AC D H Y
Sbjct: 329 CFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDY--- 385
Query: 331 VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLI 375
G P +LV++Y+ G A ++P P++ W +L+
Sbjct: 386 -GIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 187/363 (51%), Gaps = 32/363 (8%)
Query: 140 MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS 199
+I+ + G + A +F+++ F+WN I + +PREAL +F +M S
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
+KFT + A A +RLG ++HG ++AG D + L+DLY KCG D R +F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 260 DQMVDKDVVSWTTMIHRCFEDG-------------------------------RREEGFS 288
D+M + +VSWTTM++ + R +E F
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 289 LFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYS 348
LFR + V+PNE+T +L+A + +G+ VH Y + G+ F G+AL+D+YS
Sbjct: 238 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYS 297
Query: 349 KCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGT-KPDQITFV 407
KCG+ + A +VF+ + L +W S+I +G + AL FE + + + +PD ITFV
Sbjct: 298 KCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFV 357
Query: 408 GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI 467
GVLSAC + G V GL YF + + +G+ +H AC+I LL ++ +A N++++M
Sbjct: 358 GVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDS 417
Query: 468 KPD 470
PD
Sbjct: 418 DPD 420
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 180/370 (48%), Gaps = 9/370 (2%)
Query: 9 IRRAFSSSSQFRHDXXXXXXXXXXXAKTNNNFEEAINALCQQKRLKEAVDL-----LHHV 63
+R+ S SS F + + + I +L + +EA+ L + H
Sbjct: 55 VRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQ 114
Query: 64 DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQ 123
+ + +I AC+ ++ G +VH L + F +F N L+DLY KCG +
Sbjct: 115 SQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGR 174
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
++FD+M R + SW TM+ G L+ A +F++MP R+ SW A I+ YV + RP E
Sbjct: 175 KVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDE 234
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
A ++FR MQ + N+FT+ + L A+ + L +G+ +H Y + G LD + +AL+
Sbjct: 235 AFQLFRRMQV-DDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALI 293
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLF-RDLMGSGVRPNE 302
D+Y KCGSL +AR +FD M K + +W +MI G EE SLF + V P+
Sbjct: 294 DMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDA 353
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGSFAGSALVDLYSKCGNTKIASRVFN 361
TF GVL ACA+ G M++V G P + ++ L + + AS +
Sbjct: 354 ITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVE 413
Query: 362 QIPR-PDLVS 370
+ PD S
Sbjct: 414 SMDSDPDFNS 423
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 46/338 (13%)
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
K+IH +++ L D+++ L+ + G A +F+Q+ +W MI +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 281 GRREEGFSLFRDLMGS-GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
+ E LF +M S + +++TF V+KAC ++ LG +VHG ++ G+ F
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 340 GSALVDLYSKCG-----------------------------NTKI--ASRVFNQIPRPDL 368
+ L+DLY KCG N+++ A VFNQ+P ++
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
VSWT++I + +N +PD A F + KP++ T V +L A T G + G + H
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG-RWVHD 275
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIE 488
K+G + +ID+ ++ G +A + D M K W S++ +HG
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLA-TWNSMITSLGVHG--- 331
Query: 489 LAKRAANALF-------EIEPENPATYITLANIYANAG 519
A +LF +EP+ T++ + + AN G
Sbjct: 332 -CGEEALSLFEEMEEEASVEPD-AITFVGVLSACANTG 367
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 254/543 (46%), Gaps = 55/543 (10%)
Query: 53 LKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDL 112
L+ AV+L++ ++P L+ + + R++H F+ +SN L+
Sbjct: 40 LRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRF 99
Query: 113 YAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRD----HFSW 168
Y SL DA ++FDEM D D+ SWN++++GY + G ++ LF E+ R D FS+
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 169 NAAISG------------------------------------YVSHGRPREALEMFRMMQ 192
AA++ Y G +A+ +F+ M+
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGK-EIHGYLVRAGLDLDEVVWSALLDLYGKCGS 251
+ ++ + N S C R GK E+ + + D V ++ L+D + K G
Sbjct: 220 EKDTVSWNAIVAS----------CSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGD 269
Query: 252 LDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA 311
+ A + M + + SW T++ + E F + SGVR +EY+ + VL A
Sbjct: 270 FNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAA 329
Query: 312 CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSW 371
A A G +H ++G D SAL+D+YSKCG K A +F +PR +L+ W
Sbjct: 330 VAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVW 389
Query: 372 TSLIGGFAQNGQPDRALHFF-ELLLKSGTKPDQITFVGVLSACTHAGL-VDKGLEYFHSI 429
+I G+A+NG A+ F +L + KPD+ TF+ +L+ C+H + ++ L YF +
Sbjct: 390 NEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMM 449
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIEL 489
++ + + +H +I + + G +A+ +I D W +LLG C +++
Sbjct: 450 INEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKA 509
Query: 490 AKRAANALFEI--EPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEI 547
AK A + E+ ++ YI ++N+YA +W E ++RK M G++K+ G SWI+
Sbjct: 510 AKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDS 569
Query: 548 KRQ 550
+ +
Sbjct: 570 RTK 572
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 150/318 (47%), Gaps = 50/318 (15%)
Query: 167 SWNA---AISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEI 223
SW+ A++ + S G R A+E+ +K ++S L L + + L +++
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDAS-----PLVHLLRVSGNYGYVSLCRQL 77
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRR 283
HGY+ + G + + ++L+ Y SL++A +FD+M D DV+SW +++ + GR
Sbjct: 78 HGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 284 EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS-FAGSA 342
+EG LF +L S V PNE++FT L ACA LG +H ++++G + G+ G+
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 343 LVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
L+D+Y KCG A VF + D VSW +++ ++NG+ + L FF + PD
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPD 253
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
+T Y +ID +SG FN A ++
Sbjct: 254 TVT------------------------------------YNELIDAFVKSGDFNNAFQVL 277
Query: 463 DNMSIKPDKFLWASLLGG 480
+M P+ W ++L G
Sbjct: 278 SDMP-NPNSSSWNTILTG 294
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 165/309 (53%), Gaps = 4/309 (1%)
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM 294
D V ++ L+D K + AR +FD M +D+VSW ++I + E LF +++
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 295 GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK 354
G++P+ L ACA GK +H Y R SF + LVD Y+KCG
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 355 IASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACT 414
A +F L +W ++I G A +G + + +F ++ SG KPD +TF+ VL C+
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 415 HAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI---KPDK 471
H+GLVD+ F ++ + + HY C+ DLL R+G EA +I+ M +K
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 472 FL-WASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKD 530
L W+ LLGGCRIHGNIE+A++AAN + + PE+ Y + +YANA +W E KVR+
Sbjct: 422 LLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREI 481
Query: 531 MEIRGIVKK 539
++ VKK
Sbjct: 482 IDRDKKVKK 490
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 11/331 (3%)
Query: 66 PSPRLYSTLIAACV--RHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQ 123
P + + AC ++ L + +H + +F N L+ +Y+ + A
Sbjct: 113 PDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSAL 172
Query: 124 RLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPRE 183
+LFDE RD+ ++N +I G K + +AR+LFD MP RD SWN+ ISGY RE
Sbjct: 173 QLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCRE 232
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALL 243
A+++F M N + S L+A A + GK IH Y R L +D + + L+
Sbjct: 233 AIKLFDEMVALGLKPDN-VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 244 DLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
D Y KCG +D A IF+ DK + +W MI G E FR ++ SG++P+
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG--SALVDLYSKCGNTKIASRVFN 361
TF VL C+ + + MR YD + DL + G + A+ +
Sbjct: 352 TFISVLVGCSHSGLVDEARNLFD-QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIE 410
Query: 362 QIP-----RPDLVSWTSLIGGFAQNGQPDRA 387
Q+P R L++W+ L+GG +G + A
Sbjct: 411 QMPKDGGNREKLLAWSGLLGGCRIHGNIEIA 441
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 48/254 (18%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ Q +EA+ L + +P + ++AC + ++G+ +H TK
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLG----WLEQARK 155
F++ L+D YAKCG + A +F+ D+ L +WN MI G A G ++ RK
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 156 LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
+ + D ++ + + G G EA +F M+ N
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN----------------- 383
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD-----KDVVSW 270
+E+ Y + DL G+ G ++EA + +QM + +++W
Sbjct: 384 -----REMKHY-------------GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 271 TTMIHRCFEDGRRE 284
+ ++ C G E
Sbjct: 426 SGLLGGCRIHGNIE 439
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 179/357 (50%), Gaps = 32/357 (8%)
Query: 57 VDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKC 116
+ +L+H P+ +++ AC +AL GR+VH+L +F+ L+D+YAKC
Sbjct: 273 IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 117 GSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYV 176
G ++D RK+FD M R+ +W + I+ +
Sbjct: 333 GEISDC-------------------------------RKVFDGMSNRNTVTWTSIIAAHA 361
Query: 177 SHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDE 236
G EA+ +FR+M++ +N T+ S L A ++ L LGKE+H +++ ++ +
Sbjct: 362 REGFGEEAISLFRIMKRRHLI-ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 237 VVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS 296
+ S L+ LY KCG +A + Q+ +DVVSWT MI C G E ++++
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 297 GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIA 356
GV PN +T++ LKACA+ + +G+ +H + F GSAL+ +Y+KCG A
Sbjct: 481 GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA 540
Query: 357 SRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC 413
RVF+ +P +LVSW ++I G+A+NG AL + G + D F +LS C
Sbjct: 541 FRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 215/446 (48%), Gaps = 44/446 (9%)
Query: 61 HHVDRPSPRLYSTLIAACVRHRALEQGRRVHA-LTKSSNFIPGIFISNRLLDLYAKCGSL 119
H + + R++ L+ C R E GR+VH + K + + + + L+ YA+CG L
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG--VGNLIVESSLVYFYAQCGEL 234
Query: 120 ADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHG 179
A + FD M +D SW A IS G
Sbjct: 235 T-------------------------------SALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 180 RPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVW 239
+A+ MF M H N+FT+ S L A + LR G+++H +V+ + D V
Sbjct: 264 HGIKAIGMFIGMLNHWFL-PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322
Query: 240 SALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVR 299
++L+D+Y KCG + + R +FD M +++ V+WT++I +G EE SLFR + +
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 300 PNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRV 359
N T +L+AC A LGKE+H +++ + + GS LV LY KCG ++ A V
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442
Query: 360 FNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLV 419
Q+P D+VSWT++I G + G AL F + +++ G +P+ T+ L AC ++ +
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502
Query: 420 DKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFL--WASL 477
G HSI +K+ + + +I + A+ G +EA + D+M P+K L W ++
Sbjct: 503 LIG-RSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSM---PEKNLVSWKAM 558
Query: 478 LGGCRIHGNIELAKRAANALFEIEPE 503
+ G +G + A ++ +E E
Sbjct: 559 IMGYARNG---FCREALKLMYRMEAE 581
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 201/401 (50%), Gaps = 9/401 (2%)
Query: 120 ADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHG 179
A A + FD D+ + N +I+ +LG L ARK+FD MP ++ +W A I GY+ +G
Sbjct: 106 AMALKCFD---DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 180 RPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVW 239
EA +F KH +N+ L + LG+++HG +V+ G+ + +V
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVE 221
Query: 240 SALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVR 299
S+L+ Y +CG L A FD M +KDV+SWT +I C G + +F ++
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 300 PNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRV 359
PNE+T +LKAC++ A G++VH +++ F G++L+D+Y+KCG +V
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 360 FNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLV 419
F+ + + V+WTS+I A+ G + A+ F ++ + + +T V +L AC G +
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 420 DKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLG 479
G E H+ K+ + + ++ L + G +A N++ + + D W +++
Sbjct: 402 LLGKE-LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMIS 459
Query: 480 GCRIHGNIELAKRAANALFE--IEPENPATYITLANIYANA 518
GC G+ A + + +EP NP TY + AN+
Sbjct: 460 GCSSLGHESEALDFLKEMIQEGVEP-NPFTYSSALKACANS 499
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 136/267 (50%), Gaps = 8/267 (2%)
Query: 217 LRLGKEIHGYLVRAGLDLDEVVW--SALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI 274
+RL K IH ++ D D+V++ + L+ + G L AR +FD M +K+ V+WT MI
Sbjct: 98 MRLIKRIHAMALKC-FD-DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMI 155
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVR-PNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
+ G +E F+LF D + G+R NE F +L C+ A LG++VHG M++VG
Sbjct: 156 DGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV 215
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFEL 393
S+LV Y++CG A R F+ + D++SWT++I ++ G +A+ F
Sbjct: 216 G-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIG 274
Query: 394 LLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
+L P++ T +L AC+ + G + HS+ K + ++D+ A+ G
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQ-VHSLVVKRMIKTDVFVGTSLMDMYAKCG 333
Query: 454 RFNEAENIIDNMSIKPDKFLWASLLGG 480
++ + D MS + + W S++
Sbjct: 334 EISDCRKVFDGMSNR-NTVTWTSIIAA 359
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 107/242 (44%), Gaps = 32/242 (13%)
Query: 73 TLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR 132
+++ AC AL G+ +HA ++ ++I + L+ LY KCG DA
Sbjct: 390 SILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA---------- 439
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQ 192
+N + ++P RD SW A ISG S G EAL+ + M
Sbjct: 440 ----FNVL-----------------QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 193 KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL 252
+ E N FT SS L A A L +G+ IH + + V SAL+ +Y KCG +
Sbjct: 479 Q-EGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
EA +FD M +K++VSW MI +G E L + G ++Y F +L C
Sbjct: 538 SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Query: 313 AD 314
D
Sbjct: 598 GD 599
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 55 EAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
EA+D L + + P+P YS+ + AC +L GR +H++ K ++ + +F+ + L+
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALI 528
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM 160
+YAKCG +++A R+FD M +++L SW MI GYA+ G+ +A KL M
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 212/464 (45%), Gaps = 71/464 (15%)
Query: 51 KRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
K LK V + H P+ Y +++ + L GR++H + + GI + N L+
Sbjct: 299 KALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALI 358
Query: 111 DLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNA 170
D YAKC G LE +R FD + ++ WNA
Sbjct: 359 DFYAKC-------------------------------GNLEDSRLCFDYIRDKNIVCWNA 387
Query: 171 AISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA 230
+SGY + P +M+Q ++T S+ L + C+ +++H +VR
Sbjct: 388 LLSGYANKDGPICLSLFLQMLQM--GFRPTEYTFSTALKSC----CVTELQQLHSVIVRM 441
Query: 231 GLDLDEVVWSALLDLYGKCGSLDEA-------------------------RGIFDQMV-- 263
G + ++ V S+L+ Y K +++A RG + + V
Sbjct: 442 GYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKL 501
Query: 264 -----DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAE 318
D VSW I C EE LF+ ++ S +RP++YTF +L C+
Sbjct: 502 ISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDL 561
Query: 319 HLGKEVHGYMMRVGYDPG-SFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
LG +HG + + + +F + L+D+Y KCG+ + +VF + +L++WT+LI
Sbjct: 562 TLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISC 621
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+G AL F+ L G KPD+++F+ +L+AC H G+V +G+ F +K+ +G+
Sbjct: 622 LGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEP 680
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGC 481
DHY C +DLLAR+G EAE++I M D +W + L GC
Sbjct: 681 EMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 183/394 (46%), Gaps = 53/394 (13%)
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
D ++ N++I+ Y K G A ++F + D SWNA I P +AL++F
Sbjct: 247 DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M +H S N+ T S L ++ + L G++IHG L++ G + V+ +AL+D Y KCG
Sbjct: 307 MPEHGFS-PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 251 SLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
+L+++R FD + DK++V W ++ + + SLF ++ G RP EYTF+ LK
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV-------------------------- 344
+C + L H ++R+GY+ + S+L+
Sbjct: 425 SCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 345 ------DLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG 398
+YS+ G + ++ + + +PD VSW I +++ + + F+ +L+S
Sbjct: 481 PLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN 540
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM-----HTADHYAC--VIDLLAR 451
+PD+ TFV +LS C+ L D L HGL+ AD + C +ID+ +
Sbjct: 541 IRPDKYTFVSILSLCSK--LCDLTLG-----SSIHGLITKTDFSCADTFVCNVLIDMYGK 593
Query: 452 SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHG 485
G + + K + W +L+ IHG
Sbjct: 594 CGSIRSVMKVFEETREK-NLITWTALISCLGIHG 626
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 206/426 (48%), Gaps = 44/426 (10%)
Query: 58 DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHAL--TKSSNFIPGIFISNRLLDLYAK 115
DL +H DR +L+ C + + + + +HAL T S + +++ N ++ LY K
Sbjct: 7 DLANHNDR-----VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEK 61
Query: 116 CGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGY 175
G ++ A ++FD+M +R+ S+NT+I GY+K G +++A +F EM +F GY
Sbjct: 62 LGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM---RYF-------GY 111
Query: 176 VSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL- 234
+ N+ T+ SGL + A++ +R G ++HG ++ GL +
Sbjct: 112 L----------------------PNQSTV-SGLLSCASLD-VRAGTQLHGLSLKYGLFMA 147
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM 294
D V + LL LYG+ L+ A +F+ M K + +W M+ G +E FR+L+
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELV 207
Query: 295 GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK 354
G E +F GVLK + + K++H + G D ++L+ Y KCGNT
Sbjct: 208 RMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTH 267
Query: 355 IASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACT 414
+A R+F D+VSW ++I A++ P +AL F + + G P+Q T+V VL +
Sbjct: 268 MAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSS 327
Query: 415 HAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLW 474
L+ G + H + K+G +ID A+ G ++ D + K + W
Sbjct: 328 LVQLLSCGRQ-IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK-NIVCW 385
Query: 475 ASLLGG 480
+LL G
Sbjct: 386 NALLSG 391
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 175/396 (44%), Gaps = 47/396 (11%)
Query: 140 MIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNS 199
++ Y +L LE A ++F++MP + +WN +S G +E + FR + + +S
Sbjct: 155 LLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS-- 212
Query: 200 NKFTLSSGLAAAAAIPCLR---LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEAR 256
T SS L + C++ + K++H + GLD + V ++L+ YGKCG+ A
Sbjct: 213 --LTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAE 270
Query: 257 GIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHA 316
+F D+VSW +I + + LF + G PN+ T+ VL +
Sbjct: 271 RMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQ 330
Query: 317 AEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG 376
G+++HG +++ G + G G+AL+D Y+KCGN + + F+ I ++V W +L+
Sbjct: 331 LLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS 390
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G+A P L F +L+ G +P + TF L +C L+ HS+ + G
Sbjct: 391 GYANKDGP-ICLSLFLQMLQMGFRPTEYTFSTALKSCCVT-----ELQQLHSVIVRMGYE 444
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANA 496
+ ++ A++ N+A ++D WAS
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLLLD----------WAS-------------------- 474
Query: 497 LFEIEPENPATYITLANIYANAGQWAEEAKVRKDME 532
P + +A IY+ GQ+ E K+ +E
Sbjct: 475 ----GPTSVVPLNIVAGIYSRRGQYHESVKLISTLE 506
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 43 AINALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
AI A + +E ++L H+ RP + ++++ C + L G +H L ++
Sbjct: 516 AIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 99 F-IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
F F+ N L+D+Y KCGS+ ++F+E +++L +W +I+ G+ ++A + F
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 158 DEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKH 194
E + D S+ + ++ G +E + +F+ M+ +
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDY 676
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 214/424 (50%), Gaps = 38/424 (8%)
Query: 44 INALCQQKRLKEAVDLLHHVDR-----PSPRLYSTLIAACVRHRALEQGRRVHA-LTKSS 97
I L KR EA+ L + P+ + +T++ +AL+ G+ VHA + KS
Sbjct: 287 IAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSK 346
Query: 98 NFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLF 157
N++ F+ + L+DLY KCG +A R++F
Sbjct: 347 NYVEQPFVHSGLIDLYCKCGDMASG-------------------------------RRVF 375
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
+R+ SW A +SGY ++GR +AL MQ+ E + T+++ L A + +
Sbjct: 376 YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ-EGFRPDVVTIATVLPVCAELRAI 434
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
+ GKEIH Y ++ + + ++L+ +Y KCG + +FD++ ++V +WT MI
Sbjct: 435 KQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
E+ G +FR ++ S RP+ T VL C+D A LGKE+HG++++ ++
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP 554
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
F + ++ +Y KCG+ + A+ F+ + ++WT++I + N A++ FE ++
Sbjct: 555 FVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSR 614
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G P+ TF VLS C+ AG VD+ +F+ + + L + +HY+ VI+LL R GR E
Sbjct: 615 GFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEE 674
Query: 458 AENI 461
A+ +
Sbjct: 675 AQRL 678
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 191/387 (49%), Gaps = 36/387 (9%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I +Q L+ A+ +L ++++ + +S L+ ACVR ++L G++VH + +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
F+ +L+ +Y CGS+ DAQ++FDE ++ SWN ++ G
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRG---------------- 186
Query: 160 MPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRL 219
ISG R ++ L F M + + N ++LS+ + A LR
Sbjct: 187 ----------TVISG---KKRYQDVLSTFTEM-RELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 220 GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFE 279
G + H ++ GL + ++L+D+Y KCG + AR +FD++V++D+V W MI
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 280 DGRREEGFSLFRDLMG-SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV-GYDPGS 337
+ R+ E LFR ++ + PN T +L D A LGKEVH ++++ Y
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
F S L+DLY KCG+ RVF + + +SWT+L+ G+A NG+ D+AL + +
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLE 424
G +PD +T VL C + +G E
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKE 439
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 212/449 (47%), Gaps = 44/449 (9%)
Query: 83 ALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIA 142
AL QG + HAL + +F+ L+D+Y KCG
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG------------------------- 263
Query: 143 GYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKF 202
K+G AR++FDE+ RD W A I+G + R EAL +FR M E N
Sbjct: 264 ---KVGL---ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSV 317
Query: 203 TLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDE-VVWSALLDLYGKCGSLDEARGIFDQ 261
L++ L + L+LGKE+H +++++ +++ V S L+DLY KCG + R +F
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG 377
Query: 262 MVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
++ +SWT ++ +GR ++ + G RP+ T VL CA+ A G
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQN 381
KE+H Y ++ + P ++L+ +YSKCG + R+F+++ + ++ +WT++I + +N
Sbjct: 438 KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Query: 382 GQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE-YFHSIKEKHGLMHTAD 440
+ F L+L S +PD +T VL+ C+ + G E + H +K++ +
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS 557
Query: 441 HYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEI 500
A +I + + G A D +++K W +++ +G EL + A N ++
Sbjct: 558 --ARIIKMYGKCGDLRSANFSFDAVAVK-GSLTWTAIIEA---YGCNELFRDAINCFEQM 611
Query: 501 EPE----NPATYITLANIYANAGQWAEEA 525
N T+ + +I + AG + +EA
Sbjct: 612 VSRGFTPNTFTFTAVLSICSQAG-FVDEA 639
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 143/298 (47%), Gaps = 6/298 (2%)
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
N T S+ L A L GK++H ++ GL+ +E + + L+ +Y CGS+ +A+ +F
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 260 DQMVDKDVVSWTTMIHRCFEDGRR--EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
D+ +V SW ++ G++ ++ S F ++ GV N Y+ + V K+ A +A
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
G + H ++ G F ++LVD+Y KCG +A RVF++I D+V W ++I G
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 378 FAQNGQPDRALHFFELLL-KSGTKPDQITFVGVLSACTHAGLVDKGLE-YFHSIKEKHGL 435
A N + AL F ++ + P+ + +L + G E + H +K K+ +
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRA 493
H + +IDL + G + S + + W +L+ G +G + A R+
Sbjct: 350 EQPFVH-SGLIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYAANGRFDQALRS 405
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 8/214 (3%)
Query: 273 MIHRCFEDGRR----EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYM 328
+IHR + R E ++ L G+ N TF+ +L+AC + GK+VH ++
Sbjct: 78 IIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHI 137
Query: 329 MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQP--DR 386
G + F + LV +Y+ CG+ K A +VF++ ++ SW +L+ G +G+
Sbjct: 138 RINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQD 197
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
L F + + G + + V + A + +GL+ H++ K+GL ++ ++
Sbjct: 198 VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT-HALAIKNGLFNSVFLKTSLV 256
Query: 447 DLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG 480
D+ + G+ A + D + ++ D +W +++ G
Sbjct: 257 DMYFKCGKVGLARRVFDEI-VERDIVVWGAMIAG 289
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 177/316 (56%), Gaps = 5/316 (1%)
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM 294
+ V W+ ++ G ++A ++M ++ VVSWTT+I + +E LF ++
Sbjct: 188 NPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMV 247
Query: 295 G-SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSF-AGSALVDLYSKCGN 352
++PNE T +L A + + VH Y+ + G+ P ++L+D Y+KCG
Sbjct: 248 ACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGC 307
Query: 353 TKIASRVFNQIP--RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVL 410
+ A + F +IP R +LVSWT++I FA +G A+ F+ + + G KP+++T + VL
Sbjct: 308 IQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVL 367
Query: 411 SACTHAGLVDKG-LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKP 469
+AC+H GL ++ LE+F+++ ++ + HY C++D+L R GR EAE I + I+
Sbjct: 368 NACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEE 427
Query: 470 DKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRK 529
+W LLG C ++ + ELA+R L E+E + Y+ ++NI+ G++ + + RK
Sbjct: 428 KAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRK 487
Query: 530 DMEIRGIVKKPGKSWI 545
M++RG+ K PG S +
Sbjct: 488 QMDVRGVAKLPGHSQV 503
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 6/281 (2%)
Query: 103 IFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPR 162
+++ L+ +Y G++ DA ++FDEM +R+ +WN MI G LG E+A ++MP
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 163 RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE 222
R SW I GY +P+EA+ +F M ++ N+ T+ + L A + L++
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 223 IHGYLVRAG-LDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD--KDVVSWTTMIHRCFE 279
+H Y+ + G + D V ++L+D Y KCG + A F ++ + K++VSWTTMI
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH--AAEHLGKEVHGYMMRVGYDPGS 337
G +E S+F+D+ G++PN T VL AC+ A E + + + P
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQIP-RPDLVSWTSLIGG 377
LVD+ + G + A ++ +IP V W L+G
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 99/233 (42%), Gaps = 42/233 (18%)
Query: 330 RVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPD---------------------- 367
++G++ + +ALV +Y GN A +VF+++P +
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 368 ---------LVSWTSLIGGFAQNGQPDRALHFFELLLK-SGTKPDQITFVGVLSACTHAG 417
+VSWT++I G+A+ +P A+ F ++ KP++IT + +L A + G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 418 LVDKGLEYFHSIKEKHGLMHTADHYA-CVIDLLARSGRFNEA-ENIIDNMSIKPDKFLWA 475
+ K H+ K G + +ID A+ G A + I+ + + + W
Sbjct: 271 DL-KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 476 SLLGGCRIHGNIELAKRAANALFEIE----PENPATYITLANIYANAGQWAEE 524
+++ IHG + K A + ++E N T I++ N ++ G EE
Sbjct: 330 TMISAFAIHG---MGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEE 379
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 208/430 (48%), Gaps = 35/430 (8%)
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV 228
N Y+ P++AL + + + + +T S ++ C+ GK HG +
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRF-GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAI 145
Query: 229 RAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMI------------HR 276
+ G D V ++L+ +Y CG+LD A+ +F ++ +D+VSW ++I H+
Sbjct: 146 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 277 CFED-----------------GRREEG--FSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
F++ G G SLFR+++ +G + NE T +L AC A
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGG 377
G+ VH ++R + +AL+D+Y KC +A R+F+ + + V+W +I
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+G+P+ L FE ++ +PD++TFVGVL C AGLV +G Y+ + ++ +
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAA 494
H C+ +L + +G EAE + N+ + P+ WA+LL R GN L + A
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIA 445
Query: 495 NALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVF 554
+L E +P N Y L NIY+ G+W + +VR+ ++ R I + PG +++K VH
Sbjct: 446 KSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGL 505
Query: 555 LVGDTSHPKI 564
+G K+
Sbjct: 506 RLGCKEAEKV 515
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 6/332 (1%)
Query: 58 DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCG 117
D+L P + +LI+ + ++ G+ H + + N L+ +Y CG
Sbjct: 108 DILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCG 167
Query: 118 SLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVS 177
+L A++LF E+ RD+ SWN++IAG + G + A KLFDEMP ++ SWN IS Y+
Sbjct: 168 ALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLG 227
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
P ++ +FR M + N+ TL L A L+ G+ +H L+R L+ V
Sbjct: 228 ANNPGVSISLFREMVR-AGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
+ +AL+D+YGKC + AR IFD + ++ V+W MI GR E G LF ++
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMM-RVGYDPGSFAGSALVDLYSKCGNTKIA 356
+RP+E TF GVL CA G+ + M+ P + +LYS G + A
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEA 406
Query: 357 SRVFNQIP----RPDLVSWTSLIGGFAQNGQP 384
+P P+ W +L+ G P
Sbjct: 407 EEALKNLPDEDVTPESTKWANLLSSSRFTGNP 438
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 198/368 (53%), Gaps = 15/368 (4%)
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP 366
G+ K C + A + VH + D S+ ++++YS C +T A VFN++P+
Sbjct: 117 GLAKLCGEVEALEEARVVHDCI--TPLDARSY--HTVIEMYSGCRSTDDALNVFNEMPKR 172
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYF 426
+ +W ++I A+NG+ +RA+ F ++ G KPD+ F V AC G +++GL +F
Sbjct: 173 NSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHF 232
Query: 427 HSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGN 486
S+ +G++ + + Y VI++LA G +EA + ++ M+++P +W +L+ C + G
Sbjct: 233 ESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGY 292
Query: 487 IELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIE 546
+EL R A + +++ + + A A A E K+++ + I P
Sbjct: 293 LELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAME-KLKELRYCQMIRDDP------ 345
Query: 547 IKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYH 606
K+++H F GDTSH + + F L +M + G+VP T VEEE+KE+ L +
Sbjct: 346 -KKRMHEFRAGDTSH--LGTVSAF-RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFR 401
Query: 607 SEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDG 666
S KLA A II++ P+ V +N+RTC+D H K S I R +I RD ++H +++G
Sbjct: 402 SNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNG 461
Query: 667 SCSCKDYW 674
CSCKDYW
Sbjct: 462 VCSCKDYW 469
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 129/305 (42%), Gaps = 60/305 (19%)
Query: 42 EAINALCQQKRLKEAVDLLHHVDRPS-----PRLYSTLIAACVRHRALEQGRRVHALTKS 96
E +ALC+Q +++EA++++ ++ PRL L C ALE+ R VH
Sbjct: 82 ETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLG-LAKLCGEVEALEEARVVH----- 135
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKL 156
C + DA+ S++T+I Y+ + A +
Sbjct: 136 ------------------DCITPLDAR------------SYHTVIEMYSGCRSTDDALNV 165
Query: 157 FDEMPRRDHFSWNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKFTLSSGLAAAAAIP 215
F+EMP+R+ +W I +G A++MF R +++ + F A
Sbjct: 166 FNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIF-------KAVFFA 218
Query: 216 CLRLGKEIHGYL------VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-VDKDVV 268
C+ +G G L G+ L + ++++ CG LDEA ++M V+ V
Sbjct: 219 CVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVE 278
Query: 269 SWTTMIHRCFEDGRREEGFSLFRDLMGS--GVRPNEYTFTGVLKACA-DHAAEHLGKEVH 325
W T+++ C+ G E G F +L+ R ++ + G++ A A D A E L + +
Sbjct: 279 MWETLMNLCWVQGYLELG-DRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRY 337
Query: 326 GYMMR 330
M+R
Sbjct: 338 CQMIR 342
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 202/417 (48%), Gaps = 48/417 (11%)
Query: 68 PRLYSTLIAACVRHRALEQGRRVH---ALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
P + + ++ V+H ++E R+V + K S++ N ++ Y K G+ +A +
Sbjct: 136 PYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW-------NVMISGYWKWGNKEEACK 188
Query: 125 LFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREA 184
LFD M + D+ SW MI G+AK+ LE ARK FD MP + SWNA +SGY +G +A
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 185 LEMFR-MMQKHESSNSNKFTLSSGLAAAAAIPCL--RLGKEIHGYLVR-------AGLDL 234
L +F M++ N + + + A P L L K I VR A LD+
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 235 ---------------------DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTM 273
+ V W+A++ Y + G + AR +FD M ++VVSW ++
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 274 IHRCFEDGRREEGFSLFRDLMGSG-VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG 332
I +G+ F D++ G +P+E T VL AC A LG + Y+ +
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ 428
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFE 392
+L+ +Y++ GN A RVF+++ D+VS+ +L FA NG L+
Sbjct: 429 IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLS 488
Query: 393 LLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 449
+ G +PD++T+ VL+AC AGL+ +G F SI+ ADHYAC +DLL
Sbjct: 489 KMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNP-----LADHYAC-MDLL 539
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 198/461 (42%), Gaps = 111/461 (24%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISN----------------RLLDLYAK 115
S +I+ C R RA R L S P +F+ N RL + ++
Sbjct: 43 SRIISCCTRLRAPSYYTR---LIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSR 99
Query: 116 CGSLADA-----------------QRLFDEMG-DRDLCSWNTMIAGYAKLGWLEQARKLF 157
CG + DA Q L +++G +D N ++ Y K +E ARK+F
Sbjct: 100 CGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVF 159
Query: 158 DEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
D++ +R WN ISGY G EA ++F MM ++
Sbjct: 160 DQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN----------------------- 196
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
D V W+ ++ + K L+ AR FD+M +K VVSW M+
Sbjct: 197 -----------------DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGY 239
Query: 278 FEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGS 337
++G E+ LF D++ GVRPNE T+ V+ AC+ A L + + +
Sbjct: 240 AQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNC 299
Query: 338 FAGSALVDLYSKCGNTKIASRVFNQI--------------------------------PR 365
F +AL+D+++KC + + A R+FN++ P+
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG-TKPDQITFVGVLSACTHAGLVDKGLE 424
++VSW SLI G+A NGQ A+ FFE ++ G +KPD++T + VLSAC H ++ G
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC 419
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
I+ K+ + Y +I + AR G EA+ + D M
Sbjct: 420 IVDYIR-KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 143/256 (55%), Gaps = 1/256 (0%)
Query: 58 DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCG 117
D+L RP+ + +I+AC R + L F+ LLD++AKC
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 118 SLADAQRLFDEMG-DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYV 176
+ A+R+F+E+G R+L +WN MI+GY ++G + AR+LFD MP+R+ SWN+ I+GY
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 177 SHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDE 236
+G+ A+E F M + S ++ T+ S L+A + L LG I Y+ + + L++
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLND 433
Query: 237 VVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS 296
+ +L+ +Y + G+L EA+ +FD+M ++DVVS+ T+ +G E +L +
Sbjct: 434 SGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDE 493
Query: 297 GVRPNEYTFTGVLKAC 312
G+ P+ T+T VL AC
Sbjct: 494 GIEPDRVTYTSVLTAC 509
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 190/394 (48%), Gaps = 16/394 (4%)
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
G E + L G + G+ K C A + VH ++ + A
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 341 SALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTK 400
+A++++YS C + A +VF ++P + + ++ F NG + A+ F + G K
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 401 PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAEN 460
P+ F V S CT G V +G F ++ ++G++ + +HY V +LA SG +EA N
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 461 IIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQ 520
++ M ++P +W +L+ R+HG++EL R A + +++ T + ++AG
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA-------TRLDKVSSAGL 330
Query: 521 WAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKE 580
A +A VKK + E F D+SHP++ I+E L L ++KE
Sbjct: 331 VATKAS--------DFVKKEPSTRSE-PYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKE 381
Query: 581 EGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKNLRTCVDCHTA 640
GYVPDT + + + ++ +F + E++AV ++ + P + I + N+R DCH
Sbjct: 382 MGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDM 441
Query: 641 MKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
MK S I R +I RD+ +H F++G C C + W
Sbjct: 442 MKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 81/104 (77%)
Query: 571 LGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLFYHSEKLAVAFGIISTPPGTPIKVFKN 630
L L K++++ GYVP+T +VLHD++EE KE+ L +HSE+LA+AFGII+TPPGT I+V KN
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 195
Query: 631 LRTCVDCHTAMKYTSKIVQRKIILRDSNRFHCFEDGSCSCKDYW 674
LR C DCH +K S I R+II+RD+ RFH F DG+CSC DYW
Sbjct: 196 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 186/404 (46%), Gaps = 24/404 (5%)
Query: 106 SNRLLDLYAKCGSLADAQRLFDEM----GDRDLCSWNTMIAGYAKLGWLEQARKLFDEMP 161
SN L + G L + + + M D+ T+I G+ +LG +A K+ + +
Sbjct: 105 SNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 162 RR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCL 217
D ++N ISGY G AL + M S + + T ++ L + L
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKL 220
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTM 273
+ E+ +++ D + ++ L++ + + A + D+M D+ DVV++ +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 274 IHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
++ ++GR +E D+ SG +PN T +L++ +++ M+R G+
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALH 389
P + L++ + G A + ++P+ P+ +S+ L+ GF + + DRA+
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 390 FFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 449
+ E ++ G PD +T+ +L+A G V+ +E + + K G Y VID L
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGL 459
Query: 450 ARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELA 490
A++G+ +A ++D M +KPD ++SL+GG G ++ A
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/506 (18%), Positives = 207/506 (40%), Gaps = 52/506 (10%)
Query: 12 AFSSSSQFRHDXXXXXXXXXXXAKTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLY 71
+S+S+ H ++NN+ + + ++ K ++++H + P
Sbjct: 81 GYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPC 140
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG- 130
+TLI R + ++ + + S +P + N ++ Y K G + +A + D M
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHF------------------------ 166
D+ ++NT++ G L+QA ++ D M +RD +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 167 ---------------SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
++N ++G GR EA++ M N T + L +
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM-PSSGCQPNVITHNIILRSM 319
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM----VDKDV 267
+ +++ ++R G V ++ L++ + G L A I ++M +
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA-CADHAAEHLGKEVHG 326
+S+ ++H ++ + + ++ G P+ T+ +L A C D E E+
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED-AVEILN 438
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNG 382
+ G P + ++D +K G T A ++ +++ +PD ++++SL+GG ++ G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
+ D A+ FF + G +P+ +TF ++ + D+ +++ + + G Y
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSY 557
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIK 468
+I+ LA G EA +++ + K
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNK 583
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 13/245 (5%)
Query: 40 FEEAINALCQQKRLKEAVDLL----HHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
F IN LC++ L A+D+L H +P+ Y+ L+ + + +++
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRD----LCSWNTMIAGYAKLGWLE 151
S P I N +L K G + DA + +++ + L ++NT+I G AK G
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 152 QARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSG 207
+A KL DEM + D ++++ + G G+ EA++ F ++ N T +S
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM-GIRPNAVTFNSI 525
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDV 267
+ + +++ G +E ++ L++ G EA + +++ +K +
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Query: 268 VSWTT 272
+ ++
Sbjct: 586 MKKSS 590
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 366 PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEY 425
PD++ T+LI GF + G+ +A E+L SG PD IT+ ++S AG ++ L
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNAL-- 192
Query: 426 FHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK---PDKFLWASLL-GGC 481
S+ ++ + Y ++ L SG+ +A ++D M + PD + L+ C
Sbjct: 193 --SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 482 RIHGNIELAKRAANALFEIE----PENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
R G A L E+ + TY L N G+ E K DM G
Sbjct: 251 RDSG----VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 226/530 (42%), Gaps = 43/530 (8%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHAL- 93
F IN LC + +++ L+ +++ P+ Y+T++ H ++GR A+
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL-----HWYCKKGRFKAAIE 289
Query: 94 ----TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL----CSWNTMIAGYA 145
KS + N L+ + +A L +M R + ++NT+I G++
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 146 KLGWLEQARKLFDEMPR----RDHFSWNAAISGYVSHGRPREALEMFRMMQKH--ESSNS 199
G + A +L +EM +H ++NA I G++S G +EAL+MF MM+ S
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
+ L GL A L + + + R G+ + + ++ ++D K G LDEA +
Sbjct: 410 SYGVLLDGLCKNAEFD---LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 260 DQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH 315
++M +D D+V+++ +I+ + GR + + + G+ PN ++ ++ C
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526
Query: 316 AAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSW 371
++ M+ G+ F + LV K G A + P+ VS+
Sbjct: 527 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Query: 372 TSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKE 431
LI G+ +G+ +A F+ + K G P T+ +L G + + ++ S+
Sbjct: 587 DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Query: 432 KHGLMHTADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIE 488
+ T Y ++ + +SG +A ++ M SI PD + + SL+ G G
Sbjct: 647 VPAAVDTV-MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 489 LA---KRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG 535
+A + A A + P N Y + AGQW R+ M+ G
Sbjct: 706 IAILFAKEAEARGNVLP-NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 186/483 (38%), Gaps = 76/483 (15%)
Query: 67 SPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLF 126
+P +Y LI +R ++ + L F P ++ N +L K G
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 127 DEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALE 186
EM R +C D ++N I+ + G ++
Sbjct: 222 KEMLKRKICP---------------------------DVATFNILINVLCAEGSFEKSSY 254
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
+ + M+K SG A V ++ +L Y
Sbjct: 255 LMQKMEK------------SGYAPTI------------------------VTYNTVLHWY 278
Query: 247 GKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
K G A + D M VD DV ++ +IH R +G+ L RD+ + PNE
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 303 YTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQ 362
T+ ++ ++ + ++ M+ G P +AL+D + GN K A ++F
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 363 IP----RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGL 418
+ P VS+ L+ G +N + D A F+ + ++G +IT+ G++ G
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 419 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI---IDNMSIKPDKFLWA 475
+D+ + + + K G+ Y+ +I+ + GRF A+ I I + + P+ +++
Sbjct: 459 LDEAVVLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 476 SLLGGCRIHGNIELAKRAANAL-FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIR 534
+L+ C G ++ A R A+ E + T+ L AG+ AE + + M
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 535 GIV 537
GI+
Sbjct: 578 GIL 580
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 185/457 (40%), Gaps = 42/457 (9%)
Query: 40 FEEAINALCQQKRLKEAVDLL-HHVDR---PSPRLYSTLIAACVRHRALEQGRRVHALT- 94
+ + A+C+ L +AV L V R P Y++LI+ R +G+ V A+
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR-----KGKTVIAILF 710
Query: 95 -----KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYA 145
N +P + +D K G ++M + D+ + N MI GY+
Sbjct: 711 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 770
Query: 146 KLGWLEQARKLFDEMPRRDH----FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNK 201
++G +E+ L EM ++ ++N + GY + ++R + + +K
Sbjct: 771 RMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN-GILPDK 829
Query: 202 FTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ 261
T S + L +G +I + G+++D ++ L+ KC + E FD
Sbjct: 830 LTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLIS---KCCANGEINWAFDL 886
Query: 262 M---------VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
+ +DKD + M+ + R +E + ++ G+ P + G++
Sbjct: 887 VKVMTSLGISLDKD--TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 944
Query: 313 ADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDL 368
V M+ P + A SA+V +KCG A+ + + + P +
Sbjct: 945 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 1004
Query: 369 VSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHS 428
S+T+L+ +NG AL ++ G K D +++ +++ G + E +
Sbjct: 1005 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1064
Query: 429 IKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
+K L + + A + LLAR F+ A+ I+ ++
Sbjct: 1065 MKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1101
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/514 (21%), Positives = 220/514 (42%), Gaps = 67/514 (13%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALT 94
F IN C++ + A DL +++ P YSTLI + L G ++ +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
+ + + +D+Y K G LA A ++ M + ++ ++ +I G + G +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 151 EQARKLFDEMPRRDH----FSWNAAISGYVSHGRPREALEMFRMMQK--HESSNSNKFTL 204
+A ++ ++ +R ++++ I G+ G R ++ M K + L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 205 SSGLAAAA-AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM- 262
GL+ + +R ++ G +R L+ VV+++L+D + + DEA +F M
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIR----LNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 263 ---VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEH 319
+ DV ++TT++ +GR EE LF + G+ P+ + ++ A H
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 320 LGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLI 375
+G ++ M R + ++ L KC + AS+ FN + PD+V++ ++I
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 376 GGF-----------------------------------AQNGQPDRALHFFELLLKSGTK 400
G+ +N D A+ F ++ + G+K
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 401 PDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAEN 460
P+ +T+ ++ + + ++ + F ++EK G+ + Y+ +ID L + GR +EA N
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 461 IID---NMSIKPDKFLWASLLGG-CRIHGNIELA 490
I + + PD +A L+ G C++ +E A
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 205/465 (44%), Gaps = 30/465 (6%)
Query: 121 DAQRLFDEMGDR-DLCSWNTMIAGYAKLGWLEQARKLF----DEMPRRDHFSWNAAISGY 175
D RL E G R + S N ++ G + + +E A +L D P + ++ I+G+
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 176 VSHGRPREALEMFRMMQKH--ESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD 233
G A ++F++M++ E TL G A L +G ++ + G+
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM---LGMGHKLFSQALHKGVK 353
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSL 289
LD VV+S+ +D+Y K G L A ++ +M + +VV++T +I +DGR E F +
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 290 FRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSK 349
+ ++ G+ P+ T++ ++ G ++ M+++GY P LVD SK
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 350 CG----NTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
G + + ++ Q R ++V + SLI G+ + + D AL F L+ G KPD T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
F V+ G +++ L F + K GL A Y +ID + + + D M
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRM-FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 466 S---IKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYANAGQ 520
I D + ++ IE A + N L E +EP+ TY T+ Y + +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD-IVTYNTMICGYCSLRR 651
Query: 521 WAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIR 565
E ++ + ++ V G + + + +HV + IR
Sbjct: 652 LDEAERIFELLK----VTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 167/398 (41%), Gaps = 45/398 (11%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALT 94
+ I+ C+ L+ L + + P +Y L+ + QG +HA+
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK-----QGLMLHAMR 482
Query: 95 KSSNFIP-----GIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYA 145
S + + + N L+D + + +A ++F MG D+ ++ T++
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 146 KLGWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNK 201
G LE+A LF M + D ++ I + H +P L++F +MQ+++
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK------ 596
Query: 202 FTLSSGLAAAAAI-----PCLRL--GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDE 254
+S+ +A + C R+ + L+ ++ D V ++ ++ Y LDE
Sbjct: 597 --ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 654
Query: 255 ARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK 310
A IF+ + + V+ T +IH ++ + +F + G +PN T+ ++
Sbjct: 655 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 311 ACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RP 366
+ ++ M G P + S ++D K G A+ +F+Q P
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 367 DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
D+V++ LI G+ + G+ A +E +L++G KPD +
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 21/314 (6%)
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD- 292
LD V L++ + G +D+A IF VV ++R + L D
Sbjct: 144 LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADH 203
Query: 293 ---LMGSGVRPNEYTFTG-VLKA--CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
L G+ P+ + G VL A C + L + H +M G+ G + + ++
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKAL--DFHRLVMERGFRVGIVSCNKVLKG 261
Query: 347 YSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
S ++ASR+ + + P P++V++ +LI GF + G+ DRA F+++ + G +PD
Sbjct: 262 LS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
I + ++ AG++ G + F K G+ ++ ID+ +SG A +
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 463 DNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYAN 517
M I P+ + L+ G G I A + + +EP + TY +L + +
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP-SIVTYSSLIDGFCK 438
Query: 518 AGQWAEEAKVRKDM 531
G + +DM
Sbjct: 439 CGNLRSGFALYEDM 452
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 214/490 (43%), Gaps = 36/490 (7%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTK 95
F+ + L L+EA+ + R P R + L+ + + +R
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLE 151
+ P +F N ++D K G + A+ LF+EM R D ++N+MI G+ K+G L+
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 152 QARKLFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSG 207
F+EM D ++NA I+ + G+ LE +R M K N + S+
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNGLKPNVVSYSTL 373
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM----V 263
+ A ++ + + + R GL +E +++L+D K G+L +A + ++M V
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 264 DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT----GVLKACADHAAEH 319
+ +VV++T +I + R +E LF + +GV PN ++ G +KA A
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 320 LGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKI--ASRVFNQIP----RPDLVSWTS 373
L E+ G G P + + C KI A V N++ + + + +T+
Sbjct: 494 LLNELKGR----GIKPDLLLYGTFI--WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 374 LIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH 433
L+ + ++G P LH + + + + +TF ++ LV K ++YF+ I
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 434 GLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK---PDKFLWASLLGGCRIHGNIELA 490
GL A + +ID L + + A + + M K PD+ + SL+ G GN+ A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 491 KRAANALFEI 500
+ + EI
Sbjct: 668 LALRDKMAEI 677
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 191/425 (44%), Gaps = 26/425 (6%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALT 94
+ IN C+ +L ++ + +P+ YSTL+ A + ++Q + +
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEM----GDRDLCSWNTMIAGYAKLGWL 150
+ +P + L+D K G+L+DA RL +EM + ++ ++ +I G +
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 151 EQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
++A +LF +M + S+NA I G+V ALE+ + K + +
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDLLLYGT 512
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
+ ++ + K + + G+ + ++++ L+D Y K G+ E + D+M + D
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 267 ----VVSWTTMIHRCFEDGRREEGFSLFRDLMGS-GVRPNEYTFTGVLKA-CADHAAEHL 320
VV++ +I ++ + F + G++ N FT ++ C D+ E
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA- 631
Query: 321 GKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIG 376
+ M++ G P A ++L+D K GN A + +++ + DL+++TSL+
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G + Q +A F E ++ G PD++ + VL G +D+ +E S KH L+
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE-LQSYLMKHQLL 750
Query: 437 HTADH 441
T+D+
Sbjct: 751 -TSDN 754
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 193/460 (41%), Gaps = 74/460 (16%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALT 94
++ IN LC++ R+KE +L ++R L Y+TLI + Q +HA
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLC----SWNTMIAGYAKLGWL 150
P + L+ K G++ A D+M R LC ++ T++ G+++ G++
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 151 EQARKLFDEMPRRDHFS-----WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
+A ++ EM + FS +NA I+G+ G+ +A+ + M++
Sbjct: 397 NEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK----------- 444
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK 265
GL D V +S +L + + +DEA + +MV+K
Sbjct: 445 -------------------------GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 266 ----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
D ++++++I E R +E L+ +++ G+ P+E+T+T ++ A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRV----FNQIPRPDLVSW------ 371
++H M+ G P S L++ +K T+ A R+ F + P V++
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 372 ---------TSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKG 422
SLI GF G A FE +L KPD + ++ AG + K
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 423 LEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
+ + + L+HT A ++ L + G+ NE ++I
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIA-LVKALHKEGKVNELNSVI 698
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 215/479 (44%), Gaps = 31/479 (6%)
Query: 36 TNNNFEEAINALCQQKRLKEAVDLLH----HVDRPSPRLYSTLIAACVR-HRALEQGRRV 90
T++ F+ + + + + +A+ ++H H P Y+ ++ A +R R + V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 91 HALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAK 146
S P +F N L+ + G++ A LFD+M + ++ ++NT+I GY K
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 147 LGWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKF 202
L ++ KL M + + S+N I+G GR +E + M + S ++
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS-LDEV 311
Query: 203 TLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM 262
T ++ + +H ++R GL + +++L+ K G+++ A DQM
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 263 VDKDVV----SWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA-CADHAA 317
+ + ++TT++ + G E + + R++ +G P+ T+ ++ C
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTS 373
E V M G P + S ++ + + + A RV ++ +PD ++++S
Sbjct: 432 ED-AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 374 LIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH 433
LI GF + + A +E +L+ G PD+ T+ +++A G ++K L+ + + EK
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK- 549
Query: 434 GLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK---PDKFLWASLLGGCRIHGNIEL 489
G++ Y+ +I+ L + R EA+ ++ + + P + +L+ C NIE
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC---SNIEF 605
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/500 (20%), Positives = 195/500 (39%), Gaps = 81/500 (16%)
Query: 51 KRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
K L+E DL + + ++ ++ + R +++ + L ++ F+PG+ N +L
Sbjct: 121 KSLQETYDLCY----STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL 176
Query: 111 DLYAKCG-SLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWN 169
D + +++ A+ +F EM + + S N F++N
Sbjct: 177 DATIRSKRNISFAENVFKEMLESQV-SPNV--------------------------FTYN 209
Query: 170 AAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR 229
I G+ G AL +F M+ +P
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKME-----------------TKGCLP-------------- 238
Query: 230 AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREE 285
+ V ++ L+D Y K +D+ + M ++ +++S+ +I+ +GR +E
Sbjct: 239 -----NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 286 GFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVD 345
+ ++ G +E T+ ++K H +H M+R G P ++L+
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
Query: 346 LYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
K GN A +Q+ P+ ++T+L+ GF+Q G + A + +G P
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 402 DQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
+T+ +++ G ++ + +KEK GL Y+ V+ RS +EA +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 462 IDNM---SIKPDKFLWASLLGG-CRIHGNIELAKRAANALFEIEPENPATYITLANIYAN 517
M IKPD ++SL+ G C E L P + TY L N Y
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 518 AGQWAEEAKVRKDMEIRGIV 537
G + ++ +M +G++
Sbjct: 533 EGDLEKALQLHNEMVEKGVL 552
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 202/483 (41%), Gaps = 63/483 (13%)
Query: 55 EAVDLLHHV--DRPSPRL--YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
+AVDL + RP PRL +S L + R + + + + ++ + ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 111 DLYAKCGSLADAQRLFDEMG-------DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR 163
+ +C L+ A F MG + D +++T+I G G + +A +L D M
Sbjct: 115 NCCCRCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 164 DH----FSWNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
H + NA ++G +G+ +A+ + RM++ N+ T L
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET--GFQPNEVTYGPVLKVMCKSGQTA 229
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTMI 274
L E+ + + LD V +S ++D K GSLD A +F++M K D++ +TT+I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYD 334
GR ++G L RD++ + P+ F+ ++ +E+H M++ G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 335 PGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELL 394
PD V++TSLI GF + Q D+A H +L+
Sbjct: 350 -------------------------------PDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 395 LKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGR 454
+ G P+ TF +++ A L+D GLE F + + G++ Y +I G+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGK 437
Query: 455 FNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITL 511
A+ + M ++PD + LL G +G E +A +IE I +
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE---KALEIFEKIEKSKMELDIGI 494
Query: 512 ANI 514
NI
Sbjct: 495 YNI 497
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 195/450 (43%), Gaps = 63/450 (14%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHV----DRPSPRLYSTLI-AACVRHRALEQGRRVHAL 93
F IN LC + R+ EA++L+ + +P+ + L+ C+ + + + +
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGW 149
++ F P +L + K G A A L +M +R D ++ +I G K G
Sbjct: 204 VETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 150 LEQARKLFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
L+ A LF+EM + D + I G+ GR + ++ R M K + +
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT-------P 315
Query: 206 SGLAAAAAIPC------LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
+A +A I C LR +E+H +++ G+ D V +++L+D + K LD+A +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 260 DQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH 315
D MV K ++ ++ +I+ + ++G LFR + GV + T+ +++ +
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 316 AAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
+ KE+ M ++ RV RPD+VS+ L+
Sbjct: 436 GKLEVAKELFQEM--------------------------VSRRV-----RPDIVSYKILL 464
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
G NG+P++AL FE + KS + D + ++ +A VD + F S+ K G+
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GV 523
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNM 465
Y +I L + G +EA+ + M
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 137/343 (39%), Gaps = 52/343 (15%)
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS----GVRPNEYTFTGV 308
D+A +F +M R F R + + L DL G+ N YT + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT----KIASRVFNQIP 364
+ C L G ++++GY+P + S L++ G ++ R+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
+P L++ +L+ G NG+ A+ + ++++G +P+++T+ VL +G +E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIH 484
++E+ + A Y+ +ID L + G + A N+ + M IK K
Sbjct: 234 LLRKMEERK-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK------------- 279
Query: 485 GNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSW 544
+ Y TL + AG+W + AK+ +DM I +K
Sbjct: 280 ------------------ADIIIYTTLIRGFCYAGRWDDGAKLLRDM----IKRKITPDV 317
Query: 545 IEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
+ + F+ K+R+ EL K+M + G PDT
Sbjct: 318 VAFSALIDCFV----KEGKLREAE----ELHKEMIQRGISPDT 352
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 130/554 (23%), Positives = 230/554 (41%), Gaps = 77/554 (13%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLI---AACVRH--------RAL 84
F AINA C+ +++EAV L ++ P+ ++T+I C R+ + +
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 85 EQGRR---------VHALTKS---------------SNFIPGIFISNRLLDLYAKCGSLA 120
E+G V LT++ F P + + N L+D + + GSL
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 121 DAQRLFDEMGDRDL----CSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAI 172
A + D M + L ++NT+I GY K G + A +L EM + S+ + I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 173 SGYVSHGRPREALEMF-RMMQKHESSNSNKF-TLSSGLAAAAAIPCLRLGK-----EIHG 225
SH AL M+ ++ S TL SGL + GK E+
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC--------KHGKHSKALELWF 494
Query: 226 YLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTMIHRCFEDG 281
+ G +D +ALL + G LDEA I +++ + D VS+ T+I C
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 282 RREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGS 341
+ +E F +++ G++P+ YT++ ++ + + R G P + S
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 342 ALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
++D K T+ F+++ +P+ V + LI + ++G+ AL E +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G P+ T+ ++ + V++ F ++ GL HY +ID + G+ +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 458 AENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLA 512
E ++ M ++ P+K + ++GG GN+ A R N + E I P++ TY
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS-ITYKEFI 792
Query: 513 NIYANAGQWAEEAK 526
Y G E K
Sbjct: 793 YGYLKQGGVLEAFK 806
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 156/388 (40%), Gaps = 56/388 (14%)
Query: 39 NFEEAINALCQQKRLKEAV----DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALT 94
+F I LC A+ ++L P L +TLI+ +H + +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
+ F+ SN LL + G L +A R+ E+ R D S+NT+I+G L
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 151 EQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
++A DEM +R D+++++ I G + + EA++ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK-------------- 602
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
R G+ D +S ++D K +E + FD+M+ K+
Sbjct: 603 ----------------------RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 267 V----VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
V V + +I GR L D+ G+ PN T+T ++K + + K
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGF 378
+ M G +P F +AL+D Y K G + ++ P+ +++T +IGG+
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITF 406
A++G A + + G PD IT+
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 125/571 (21%), Positives = 236/571 (41%), Gaps = 70/571 (12%)
Query: 55 EAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYA 114
EA D++ P L++T I A + +E+ ++ + + + P + N ++D
Sbjct: 247 EAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 306
Query: 115 KCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHF 166
CG +A ++M +R L +++ ++ G + + A + EM ++ +
Sbjct: 307 MCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 167 SWNAAISGYVSHGRPREALEMFRMM-QKHESSNSNKF-TLSSGLAA-AAAIPCLRLGKEI 223
+N I ++ G +A+E+ +M K S S+ + TL G A RL KE
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE- 425
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS----WTTMIHRCFE 279
++ G ++++ +++++ L D A +M+ +++ TT+I +
Sbjct: 426 ---MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 280 DGRREEGFSLFRDLMGSG----VRPNEYTFTGVLKACADHAAEHLGKEVHG---YMMRVG 332
G+ + L+ + G R + G+ +A A + KE+ G M RV
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-------RPDLVSWTSLIGGFAQNGQPD 385
Y+ L S C K F + +PD +++ LI G + +
Sbjct: 543 YNT----------LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 386 RALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACV 445
A+ F++ ++G PD T+ ++ C A ++G E+F + K+ +T Y +
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV-VYNHL 651
Query: 446 IDLLARSGRFNEAENIIDNMS---IKPDKFLWASLLGGCRIHGNIELAKRAANALFE--- 499
I RSGR + A + ++M I P+ + SL+ G I +E AK LFE
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK----LLFEEMR 707
Query: 500 ---IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLV 556
+EP N Y L + Y GQ + + ++M + + P K V +
Sbjct: 708 MEGLEP-NVFHYTALIDGYGKLGQMVKVECLLREMHSKNV--HPNKI------TYTVMIG 758
Query: 557 GDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
G + + L E M+E+G VPD+
Sbjct: 759 GYARDGNVTEASRLLNE----MREKGIVPDS 785
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 130/554 (23%), Positives = 230/554 (41%), Gaps = 77/554 (13%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLI---AACVRH--------RAL 84
F AINA C+ +++EAV L ++ P+ ++T+I C R+ + +
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 85 EQGRR---------VHALTKS---------------SNFIPGIFISNRLLDLYAKCGSLA 120
E+G V LT++ F P + + N L+D + + GSL
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 121 DAQRLFDEMGDRDL----CSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAI 172
A + D M + L ++NT+I GY K G + A +L EM + S+ + I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 173 SGYVSHGRPREALEMF-RMMQKHESSNSNKF-TLSSGLAAAAAIPCLRLGK-----EIHG 225
SH AL M+ ++ S TL SGL + GK E+
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC--------KHGKHSKALELWF 494
Query: 226 YLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTMIHRCFEDG 281
+ G +D +ALL + G LDEA I +++ + D VS+ T+I C
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 282 RREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGS 341
+ +E F +++ G++P+ YT++ ++ + + R G P + S
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 342 ALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
++D K T+ F+++ +P+ V + LI + ++G+ AL E +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G P+ T+ ++ + V++ F ++ GL HY +ID + G+ +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 458 AENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLA 512
E ++ M ++ P+K + ++GG GN+ A R N + E I P++ TY
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS-ITYKEFI 792
Query: 513 NIYANAGQWAEEAK 526
Y G E K
Sbjct: 793 YGYLKQGGVLEAFK 806
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 156/388 (40%), Gaps = 56/388 (14%)
Query: 39 NFEEAINALCQQKRLKEAV----DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALT 94
+F I LC A+ ++L P L +TLI+ +H + +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
+ F+ SN LL + G L +A R+ E+ R D S+NT+I+G L
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 151 EQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
++A DEM +R D+++++ I G + + EA++ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK-------------- 602
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
R G+ D +S ++D K +E + FD+M+ K+
Sbjct: 603 ----------------------RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 267 V----VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
V V + +I GR L D+ G+ PN T+T ++K + + K
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGF 378
+ M G +P F +AL+D Y K G + ++ P+ +++T +IGG+
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITF 406
A++G A + + G PD IT+
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 125/571 (21%), Positives = 236/571 (41%), Gaps = 70/571 (12%)
Query: 55 EAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYA 114
EA D++ P L++T I A + +E+ ++ + + + P + N ++D
Sbjct: 247 EAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLG 306
Query: 115 KCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHF 166
CG +A ++M +R L +++ ++ G + + A + EM ++ +
Sbjct: 307 MCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI 366
Query: 167 SWNAAISGYVSHGRPREALEMFRMM-QKHESSNSNKF-TLSSGLAA-AAAIPCLRLGKEI 223
+N I ++ G +A+E+ +M K S S+ + TL G A RL KE
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE- 425
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVS----WTTMIHRCFE 279
++ G ++++ +++++ L D A +M+ +++ TT+I +
Sbjct: 426 ---MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 280 DGRREEGFSLFRDLMGSG----VRPNEYTFTGVLKACADHAAEHLGKEVHG---YMMRVG 332
G+ + L+ + G R + G+ +A A + KE+ G M RV
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIP-------RPDLVSWTSLIGGFAQNGQPD 385
Y+ L S C K F + +PD +++ LI G + +
Sbjct: 543 YNT----------LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 592
Query: 386 RALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACV 445
A+ F++ ++G PD T+ ++ C A ++G E+F + K+ +T Y +
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV-VYNHL 651
Query: 446 IDLLARSGRFNEAENIIDNMS---IKPDKFLWASLLGGCRIHGNIELAKRAANALFE--- 499
I RSGR + A + ++M I P+ + SL+ G I +E AK LFE
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK----LLFEEMR 707
Query: 500 ---IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLV 556
+EP N Y L + Y GQ + + ++M + + P K V +
Sbjct: 708 MEGLEP-NVFHYTALIDGYGKLGQMVKVECLLREMHSKNV--HPNKI------TYTVMIG 758
Query: 557 GDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
G + + L E M+E+G VPD+
Sbjct: 759 GYARDGNVTEASRLLNE----MREKGIVPDS 785
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 210/486 (43%), Gaps = 50/486 (10%)
Query: 72 STLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD 131
ST+++AC R L + + A KS + PG N LL ++ K G +A + EM +
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 132 R----DLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPRE 183
D ++N ++A Y + G+ ++A + + M ++ + ++ I Y G+ E
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 184 ALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGY-LVRAGLDL-------D 235
AL++F M K N T ++ L+ LGK+ +++ D+ +
Sbjct: 405 ALKLFYSM-KEAGCVPNTCTYNAVLSL--------LGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 236 EVVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFR 291
W+ +L L G G +F +M + D ++ T+I G + ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 292 DLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCG 351
++ +G T+ +L A A G+ V M G+ P + S ++ Y+K G
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 352 NTKIASRVFNQIPRPDLV-SW----TSLIGGF---AQNGQPDRALHFFELLLKSGTKPDQ 403
N R+ N+I + SW T L+ F A G +RA F L K G KPD
Sbjct: 576 NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS-ERA---FTLFKKHGYKPDM 631
Query: 404 ITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIID 463
+ F +LS T + D+ SI+E GL Y ++D+ R G +AE I+
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIRE-DGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
Query: 464 NM---SIKPDKFLWASLLGG-CRIHGNIELAKRAANALFE--IEPENPATYITLANIYAN 517
+ +KPD + +++ G CR G ++ A R + + E I P TY T + Y
Sbjct: 691 TLEKSQLKPDLVSYNTVIKGFCR-RGLMQEAVRMLSEMTERGIRP-CIFTYNTFVSGYTA 748
Query: 518 AGQWAE 523
G +AE
Sbjct: 749 MGMFAE 754
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 144/316 (45%), Gaps = 16/316 (5%)
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQMVD----KDVVSWTTMIHRCFEDGRR-EEGFS 288
LD ++ +L Y + G ++A +F++M + +V++ ++ + GR +
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 289 LFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYS 348
+ ++ G++ +E+T + VL ACA KE + GY+PG+ +AL+ ++
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 349 KCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
K G A V ++ D V++ L+ + + G A E++ K G P+ I
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 405 TFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDN 464
T+ V+ A AG D+ L+ F+S+KE G + Y V+ LL + R NE ++ +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 465 MS---IKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYANAG 519
M P++ W ++L C G + R + EP+ T+ TL + Y G
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD-TFNTLISAYGRCG 505
Query: 520 QWAEEAKVRKDMEIRG 535
+ +K+ +M G
Sbjct: 506 SEVDASKMYGEMTRAG 521
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 161/384 (41%), Gaps = 20/384 (5%)
Query: 133 DLCSWNTMIAGYAKLGWLEQARKLFDEM----PRRDHFSWNAAISGYVSHGRP-REALEM 187
D+ ++ T++ Y++ G E+A LF+ M P ++N + + GR R+ L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 188 FRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYG 247
M + + ++FT S+ L+A A LR KE L G + V ++ALL ++G
Sbjct: 269 LDEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 248 KCGSLDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEY 303
K G EA + +M + D V++ ++ G +E + + GV PN
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 304 TFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
T+T V+ A E ++ M G P + +A++ L K + ++ +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 364 P----RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGL- 418
P+ +W +++ G F + G +PD+ TF ++SA G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 419 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS---IKPDKFLWA 475
VD Y + G Y +++ LAR G + EN+I +M KP + ++
Sbjct: 508 VDASKMYGEMT--RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 476 SLLGGCRIHGNIELAKRAANALFE 499
+L GN +R N + E
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKE 589
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 182/466 (39%), Gaps = 43/466 (9%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y+ L+AA VR ++ V + +P ++D Y K G +A +LF M
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 131 DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRM 190
+ C NT ++NA +S R E ++M
Sbjct: 414 EAG-CVPNTC--------------------------TYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 191 MQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCG 250
M K + N+ T ++ LA + + + G + D ++ L+ YG+CG
Sbjct: 447 M-KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 251 SLDEARGIFDQMV----DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
S +A ++ +M + V ++ +++ G G ++ D+ G +P E +++
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYD-PGSFAGSALVDLYSKCGNTKIASRVFNQIP- 364
+L+ C +LG E ++ G P L+ KC + R F
Sbjct: 566 LMLQ-CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK 624
Query: 365 ---RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDK 421
+PD+V + S++ F +N D+A E + + G PD +T+ ++ G K
Sbjct: 625 HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 422 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS---IKPDKFLWASLL 478
E ++ EK L Y VI R G EA ++ M+ I+P F + + +
Sbjct: 685 AEEILKTL-EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 479 GGCRIHGNIELAKRAANALFEIEPE-NPATYITLANIYANAGQWAE 523
G G + + + + N T+ + + Y AG+++E
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 339 AGSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGFAQNGQPDRA-LHFFEL 393
A + ++ YS+ G + A +F ++ P P LV++ ++ F + G+ R L +
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 394 LLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSG 453
+ G K D+ T VLSAC GL+ + E+F +K G Y ++ + ++G
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKS-CGYEPGTVTYNALLQVFGKAG 330
Query: 454 RFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE----NPA 506
+ EA +++ M S D + L+ G +K AA + + + N
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG---FSKEAAGVIEMMTKKGVMPNAI 387
Query: 507 TYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
TY T+ + Y AG+ E K+ M+ G V
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 94/223 (42%), Gaps = 18/223 (8%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
PS L TL+ A + RAL R L K + P + I N +L ++ + A+ +
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGI 653
Query: 126 FDEMGDR----DLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYVS 177
+ + + DL ++N+++ Y + G +A ++ + + D S+N I G+
Sbjct: 654 LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCR 713
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
G +EA+ M M + FT ++ ++ A+ +++ + + +E+
Sbjct: 714 RGLMQEAVRMLSEMTER-GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFED 280
+ ++D Y + G EA D VS CF+D
Sbjct: 773 TFKMVVDGYCRAGKYSEAM---------DFVSKIKTFDPCFDD 806
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/571 (21%), Positives = 228/571 (39%), Gaps = 72/571 (12%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I LC+ RL EAV++ H+++ P Y+T+I ++ + +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEM---GDRDLCSWNTMIAGYAKLGWLEQ 152
+ IP + N +L K G + +A ++F+EM +L ++N +I + G L+
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 153 ARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGL 208
A +L D M + F + N + + EA MF M
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK-------------- 441
Query: 209 AAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDV- 267
P DE+ + +L+D GK G +D+A ++++M+D D
Sbjct: 442 ---VCTP-------------------DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 268 ---VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEV 324
+ +T++I F GR+E+G +++D++ P+ + G+ +
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 325 HGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP----DLVSWTSLIGGFAQ 380
+ + P + + S L+ K G +F + D ++ +I GF +
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 381 NGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTAD 440
G+ ++A E + G +P +T+ V+ +D+ F K K ++
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV- 658
Query: 441 HYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANAL 497
Y+ +ID + GR +EA I++ + + P+ + W SLL I A ++
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 498 FEIE-PENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLV 556
E++ N TY L N ++ + ++M+ +G+ KP S I +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM--KP--STISYTTMI----- 769
Query: 557 GDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
+ K +I E G L + K G VPD+
Sbjct: 770 --SGLAKAGNIAE-AGALFDRFKANGGVPDS 797
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/500 (21%), Positives = 214/500 (42%), Gaps = 39/500 (7%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P+ L++TLI + ++ + KSS+ I + N +D + K G + A +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 126 FDEMGDRDL----CSWNTMIAGYAKLGWLEQARKLFDEMPRRDH----FSWNAAISGYVS 177
F E+ L ++ +MI K L++A ++F+ + + +++N I GY S
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLR-LGKEIHGYLVRAGLDLDE 236
G+ EA + ++++ + S + S +A + CLR +GK V + D
Sbjct: 321 AGKFDEA---YSLLERQRAKGS----IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 237 V----VWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFS 288
++ L+D+ + G LD A + D M + +V + M+ R + + +E +
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 289 LFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYS 348
+F ++ P+E TF ++ +V+ M+ S ++L+ +
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 349 KCGNT----KIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
G KI + NQ PDL + + + G+P++ FE + PD
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 405 TFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDN 464
++ ++ AG ++ E F+S+KE+ ++ T Y VID + G+ N+A +++
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR-AYNIVIDGFCKCGKVNKAYQLLEE 612
Query: 465 MSIK---PDKFLWASLLGGC----RIHGNIELAKRAANALFEIEPENPATYITLANIYAN 517
M K P + S++ G R+ L + A + E+ N Y +L + +
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL---NVVIYSSLIDGFGK 669
Query: 518 AGQWAEEAKVRKDMEIRGIV 537
G+ E + +++ +G+
Sbjct: 670 VGRIDEAYLILEELMQKGLT 689
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/475 (19%), Positives = 197/475 (41%), Gaps = 58/475 (12%)
Query: 44 INALCQQKRLKEAVDLLHHVDR---PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFI 100
+ L + ++ EA+ + + + P+ Y+ LI R L+ + + +
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 101 PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCS-----WNTMIAGYAKLGWLEQARK 155
P + N ++D K L +A +F+EM D +C+ + ++I G K+G ++ A K
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 156 LFDEM----PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS------ 205
++++M R + + + I + +HGR + ++++ M S + +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 206 ------SGLAAAAAIPCLRLGKE-------IHGYLVRAGLD----------------LDE 236
G A I R + IHG L++AG LD
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHG-LIKAGFANETYELFYSMKEQGCVLDT 587
Query: 237 VVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRD 292
++ ++D + KCG +++A + ++M K VV++ ++I + R +E + LF +
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
+ N ++ ++ + +M+ G P + ++L+D K
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 353 TKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVG 408
A F + P+ V++ LI G + + ++A F++ + K G KP I++
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIID 463
++S AG + + F K G+ +A Y +I+ L+ R +A ++ +
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSA-CYNAMIEGLSNGNRAMDAFSLFE 821
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 178/429 (41%), Gaps = 32/429 (7%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
++ LC+ ++L EA + +D P + +LI + ++ +V+ S+
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARK 155
+ L+ + G D +++ +M ++ DL NT + K G E+ R
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 156 LFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
+F+E+ R D S++ I G + G E E+F M++ T + +
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD---TRAYNIVID 595
Query: 212 AAIPCLRLGK--EIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM----VDK 265
C ++ K ++ + G + V + +++D K LDEA +F++ ++
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIEL 655
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
+VV ++++I + GR +E + + +LM G+ PN YT+ +L A AE + + +
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK--AEEINEALV 713
Query: 326 GY--MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFA 379
+ M + P L++ K A + ++ + P +S+T++I G A
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 380 QNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTA 439
+ G A F+ +G PD + ++ ++ F + + +H
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 440 DHYACVIDL 448
CV+ L
Sbjct: 834 ---TCVVLL 839
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 135/309 (43%), Gaps = 12/309 (3%)
Query: 239 WSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLM 294
+++LL + +C + D I +M V + M+ C + + EG+ + + +
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 295 GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK 354
RP +T ++ A + + + M +GY+P + L+ ++K G
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 355 IASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVL 410
A + +++ D+V + I F + G+ D A FF + +G KPD++T+ ++
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 411 SACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK-- 468
A +D+ +E F + EK+ + Y +I +G+F+EA ++++ K
Sbjct: 281 GVLCKANRLDEAVEMFEHL-EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 469 -PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKV 527
P + +L R G ++ A + + + N +TY L ++ AG+ ++
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 528 RKDMEIRGI 536
R M+ G+
Sbjct: 400 RDSMQKAGL 408
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 228/517 (44%), Gaps = 52/517 (10%)
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGD----RDLCSWNTMIAGYAKLGWLEQARK 155
+P I N+LL AK L + M + DL S+N +I + + L A
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 156 LFDEMPRR----DHFSWNAAISGYVSHGRPREAL----EMFRMMQKHESSNSNKFTLSSG 207
+ +M + D + ++ ++GY R EA+ +MF M + + N TL G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN--TLIHG 194
Query: 208 L----AAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM- 262
L A+ A+ + +V G D + +++ K G +D A + +M
Sbjct: 195 LFLHNKASEAVALI-------DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 263 ---VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEH 319
++ DVV +TT+I + +LF ++ G+RPN T+ +++ ++
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 320 LGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLI 375
+ M+ +P SAL+D + K G A ++++++ + PD+ +++SLI
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGL 435
GF + + D A H FEL++ P+ +T+ ++ A V++G+E F + ++ GL
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GL 426
Query: 436 MHTADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKR 492
+ Y +I L ++G + A+ I M + PD ++ LL G +G +E A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 493 AANAL--FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQ 550
L ++EP+ TY + AG+ + + + ++G +K
Sbjct: 487 VFEYLQKSKMEPD-IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-----------VKPN 534
Query: 551 VHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
V ++ + + + + E L ++MKE+G +P++
Sbjct: 535 VIIYTTMISGFCR-KGLKEEADALFREMKEDGTLPNS 570
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 177/376 (47%), Gaps = 26/376 (6%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I+ALC K + +A++L +D RP+ Y++LI + R+ +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLE 151
P + + L+D + K G L +A++L+DEM R D+ +++++I G+ L+
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 152 QARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKF-TLS 205
+A+ +F+ M +D F ++N I G+ R E +E+FR M Q+ N+ + TL
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM--- 262
GL A + ++I +V G+ D + +S LLD K G L++A +F+ +
Sbjct: 438 QGLFQAGDCD---MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 263 -VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
++ D+ ++ MI + G+ E+G+ LF L GV+PN +T ++ +
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV---SWTSLIGGF 378
+ M G P S + L+ + G+ ++ + ++ V S S++
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Query: 379 AQNGQPDRALHFFELL 394
+G+ +++ + E+L
Sbjct: 615 LHDGRLEKS--YLEML 628
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 192/442 (43%), Gaps = 22/442 (4%)
Query: 44 INALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+N C KR+ EAV L+ + +P+ ++TLI H + + +
Sbjct: 157 LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC 216
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYAKLGWLEQARK 155
P +F +++ K G + A L +M + D+ + T+I + A
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 156 LFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
LF EM R + ++N+ I ++GR +A + M + + N N T S+ + A
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAF 335
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD----V 267
L ++++ +++ +D D +S+L++ + LDEA+ +F+ M+ KD V
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
V++ T+I + R EEG LFR++ G+ N T+ +++ + +++
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQ 383
M+ G P S L+D K G + A VF + + PD+ ++ +I G + G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
+ F L G KP+ I + ++S GL ++ F +KE G + + Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE-DGTLPNSGTYN 574
Query: 444 CVIDLLARSGRFNEAENIIDNM 465
+I R G + +I M
Sbjct: 575 TLIRARLRDGDKAASAELIKEM 596
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 152/330 (46%), Gaps = 16/330 (4%)
Query: 105 ISNRLLDLYAKCGSLADAQRLFDE----MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM 160
+ N LL+ K + DA +LFDE D ++N +I G +G E+A +L M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 161 P----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
D ++N I G+ +A EMF+ ++ + + T +S ++
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD----KDVVSWTT 272
+R + ++R G+ V ++ L+D Y K G + A I +M+ DVV++T+
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 273 MIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG 332
+I G+ +GF L+ ++ G+ PN +T++ ++ A + +E+ G +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRAL 388
P F + ++D + K G A+ + ++ + PD +++T LI G G+ A+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTHAGL 418
F ++ G PD+IT +LS AG+
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGM 502
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 159/397 (40%), Gaps = 86/397 (21%)
Query: 102 GIFISNRLLDL----YAKCGSLADAQRLFDEMGDRDLCSW--NTMIAGYAKLGWLEQARK 155
G+ +NRLL +A+ G L A L + + + C N+++ KL +E A K
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMK 192
Query: 156 LFDEMPR----RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
LFDE R D ++N I G G+ +ALE+ +M SG
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM--------------SGF--- 235
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFD-----QMVDKD 266
G + D V ++ L+ + K L++A +F + D
Sbjct: 236 -------------------GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
VV++T+MI + G+ E SL D++ G+ P TF ++ A +E+ G
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
M+ G P D+V++TSLI G+ + GQ +
Sbjct: 337 KMISFGCFP-------------------------------DVVTFTSLIDGYCRVGQVSQ 365
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
+E + G P+ T+ +++A + + K E + K ++ Y VI
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD-IIPQPFMYNPVI 424
Query: 447 DLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGG 480
D ++G+ NEA I++ M KPDK + L+ G
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 22/304 (7%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
F I LC + ++A++LL + P Y+TLI + L + + K
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 96 SSNFI-PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL----CSWNTMIAGYAKLGWL 150
S + P + ++ Y K G + +A L D+M + ++N ++ GYAK G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 151 EQARKLFDEMPR----RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
A ++ +M D ++ + I GY G+ + ++ M N FT S
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYSI 387
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK- 265
+ A L +E+ G L + +++ ++D + K G ++EA I ++M K
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 266 ---DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG----VLKACADHAAE 318
D +++T +I GR E S+F ++ G P++ T + +LKA A
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 319 HLGK 322
HL +
Sbjct: 508 HLNQ 511
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 34/305 (11%)
Query: 289 LFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK-------EVHGYMMRVGYDPGSFAGS 341
+F + GV PN ++ + A+ H EV G M V +
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVV---------N 175
Query: 342 ALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
+L++ K + A ++F++ R D ++ LI G G+ ++AL ++
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G +PD +T+ ++ + ++K E F +K Y +I ++G+ E
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 458 AENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAK--RAANALFEIEPENPATYITLA 512
A +++D+M I P + L+ G G + A+ R F P+ T+ +L
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD-VVTFTSLI 354
Query: 513 NIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLG 572
+ Y GQ ++ ++ ++M RG+ I I L + K R E LG
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA-----LCNENRLLKAR---ELLG 406
Query: 573 ELSKK 577
+L+ K
Sbjct: 407 QLASK 411
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 152/330 (46%), Gaps = 16/330 (4%)
Query: 105 ISNRLLDLYAKCGSLADAQRLFDE----MGDRDLCSWNTMIAGYAKLGWLEQARKLFDEM 160
+ N LL+ K + DA +LFDE D ++N +I G +G E+A +L M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 161 P----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPC 216
D ++N I G+ +A EMF+ ++ + + T +S ++
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 217 LRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD----KDVVSWTT 272
+R + ++R G+ V ++ L+D Y K G + A I +M+ DVV++T+
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 273 MIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG 332
+I G+ +GF L+ ++ G+ PN +T++ ++ A + +E+ G +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRAL 388
P F + ++D + K G A+ + ++ + PD +++T LI G G+ A+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAV 472
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTHAGL 418
F ++ G PD+IT +LS AG+
Sbjct: 473 SIFHKMVAIGCSPDKITVSSLLSCLLKAGM 502
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 159/397 (40%), Gaps = 86/397 (21%)
Query: 102 GIFISNRLLDL----YAKCGSLADAQRLFDEMGDRDLCSW--NTMIAGYAKLGWLEQARK 155
G+ +NRLL +A+ G L A L + + + C N+++ KL +E A K
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMK 192
Query: 156 LFDEMPR----RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
LFDE R D ++N I G G+ +ALE+ +M SG
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM--------------SGF--- 235
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFD-----QMVDKD 266
G + D V ++ L+ + K L++A +F + D
Sbjct: 236 -------------------GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
VV++T+MI + G+ E SL D++ G+ P TF ++ A +E+ G
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDR 386
M+ G P D+V++TSLI G+ + GQ +
Sbjct: 337 KMISFGCFP-------------------------------DVVTFTSLIDGYCRVGQVSQ 365
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 446
+E + G P+ T+ +++A + + K E + K ++ Y VI
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD-IIPQPFMYNPVI 424
Query: 447 DLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGG 480
D ++G+ NEA I++ M KPDK + L+ G
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 22/304 (7%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
F I LC + ++A++LL + P Y+TLI + L + + K
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 96 SSNFI-PGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL----CSWNTMIAGYAKLGWL 150
S + P + ++ Y K G + +A L D+M + ++N ++ GYAK G +
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 151 EQARKLFDEMPR----RDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
A ++ +M D ++ + I GY G+ + ++ M N FT S
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFPNAFTYSI 387
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK- 265
+ A L +E+ G L + +++ ++D + K G ++EA I ++M K
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 266 ---DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG----VLKACADHAAE 318
D +++T +I GR E S+F ++ G P++ T + +LKA A
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 319 HLGK 322
HL +
Sbjct: 508 HLNQ 511
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 34/305 (11%)
Query: 289 LFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK-------EVHGYMMRVGYDPGSFAGS 341
+F + GV PN ++ + A+ H EV G M V +
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVV---------N 175
Query: 342 ALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKS 397
+L++ K + A ++F++ R D ++ LI G G+ ++AL ++
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 398 GTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNE 457
G +PD +T+ ++ + ++K E F +K Y +I ++G+ E
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 458 AENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAK--RAANALFEIEPENPATYITLA 512
A +++D+M I P + L+ G G + A+ R F P+ T+ +L
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD-VVTFTSLI 354
Query: 513 NIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLG 572
+ Y GQ ++ ++ ++M RG+ I I L + K R E LG
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA-----LCNENRLLKAR---ELLG 406
Query: 573 ELSKK 577
+L+ K
Sbjct: 407 QLASK 411
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 207/497 (41%), Gaps = 58/497 (11%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P Y+ ++ V +L+ HA P + N L+ + L A
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 125 LFDEMGDRDLC----SWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYV 176
+ ++M L ++ T++ GY + G L+ A ++ ++M + S N + G+
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 177 SHGRPREALEMFRMMQKHESSNSNKFT---LSSGLAAAAAIPCLRLGKEIHGYLVRAGLD 233
GR +AL + M + +++T L +GL A + + EI +++ G D
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV---KHAIEIMDVMLQEGYD 327
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD----VVSWTTMIHRCFEDGRREEGFSL 289
D +++++ K G + EA + DQM+ +D V++ T+I ++ + EE L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 290 FRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSK 349
R L G+ P+ TF +++ + E+ M G +P F
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF----------- 436
Query: 350 CGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGV 409
++ LI G+ D AL+ + + SG IT+ +
Sbjct: 437 --------------------TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 410 LSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI-- 467
+ A + E F + E HG+ + Y +ID L +S R +A ++D M +
Sbjct: 477 IDGFCKANKTREAEEIFDEM-EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 468 -KPDKFLWASLLGG-CRIHGNIELAKRAANALFE--IEPENPATYITLANIYANAGQWAE 523
KPDK+ + SLL CR G+I+ A A+ EP + TY TL + AG+
Sbjct: 536 QKPDKYTYNSLLTHFCR-GGDIKKAADIVQAMTSNGCEP-DIVTYGTLISGLCKAGRVEV 593
Query: 524 EAKVRKDMEIRGIVKKP 540
+K+ + ++++GI P
Sbjct: 594 ASKLLRSIQMKGINLTP 610
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 194/451 (43%), Gaps = 27/451 (5%)
Query: 38 NNFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHAL 93
+ F I ALC+ +L+ A+ +L + P + ++T++ + L+ R+
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRD-----LCSWNTMIAGYAKLG 148
N ++ + K G + DA EM ++D ++NT++ G K G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 149 WLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTL 204
++ A ++ D M + D +++N+ ISG G +EA+E+ M + S N T
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS-PNTVTY 368
Query: 205 SSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDE--ARGIFDQM 262
++ ++ + E+ L G+ D +++L+ G C + + A +F++M
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ--GLCLTRNHRVAMELFEEM 426
Query: 263 VDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAE 318
K D ++ +I G+ +E ++ + + SG + T+ ++
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 319 HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSL 374
+E+ M G S + L+D K + A+++ +Q+ +PD ++ SL
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 375 IGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
+ F + G +A + + +G +PD +T+ ++S AG V+ + SI+ K G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK-G 605
Query: 435 LMHTADHYACVIDLLARSGRFNEAENIIDNM 465
+ T Y VI L R + EA N+ M
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 7/271 (2%)
Query: 138 NTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
N ++ + G L+ R++FD MP RD SW G + G +A +F M KH
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 198 NSNK---FTLSSGLAAAAAIPCLRLGKEIHGYLVRAGL--DLDEVVWSALLDLYGKCGSL 252
+ K + L L A A I LGK++H + G + D + +L+ YG+ L
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCL 246
Query: 253 DEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKAC 312
++A + Q+ + + V+W + + +G +E F ++ G++ N F+ VLKAC
Sbjct: 247 EDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKAC 306
Query: 313 A-DHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVS- 370
+ G++VH +++G++ L+++Y K G K A +VF VS
Sbjct: 307 SWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
W +++ + QNG A+ + +G K
Sbjct: 367 WNAMVASYMQNGIYIEAIKLLYQMKATGIKA 397
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 9/302 (2%)
Query: 218 RLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRC 277
R E+ +++++ + + LL ++ CG LD R +FD+M +D SW + C
Sbjct: 105 RGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGC 164
Query: 278 FEDGRREEGFSLFRDLM----GSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
E G E+ LF ++ + + VLKACA LGK+VH ++G+
Sbjct: 165 IEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGF 224
Query: 334 --DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF 391
+ S+ +L+ Y + + A+ V +Q+ + V+W + + + G+ + F
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 392 ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 451
+ G K + F VL AC+ + + H+ K G +I++ +
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGK 344
Query: 452 SGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITL 511
G+ +AE + + + W +++ +G + A L++++ + TL
Sbjct: 345 YGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG---IYIEAIKLLYQMKATGIKAHDTL 401
Query: 512 AN 513
N
Sbjct: 402 LN 403
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34 AKTNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACV-RHRALEQGRRVHA 92
AK N++ E Q+ +++ +++ +H + + ++S ++ AC G++VHA
Sbjct: 266 AKVTNDYREGEF----QEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHA 321
Query: 93 LTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCS-WNTMIAGYAKLGWLE 151
F I RL+++Y K G + DA+++F D S WN M+A Y + G
Sbjct: 322 NAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYI 381
Query: 152 QARKLFDEM 160
+A KL +M
Sbjct: 382 EAIKLLYQM 390
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 191/419 (45%), Gaps = 37/419 (8%)
Query: 121 DAQRLFDEMGDR-DLCSWNTMIAGYAKLGWLEQARKLF----DEMPRRDHFSWNAAISGY 175
D RL E G R + S N ++ G + + +E A +L D P + ++ I+G+
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 176 VSHGRPREALEMFRMMQKH--ESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLD 233
G A ++F++M++ E TL G A L +G ++ + G+
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM---LGMGHKLFSQALHKGVK 353
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSL 289
LD VV+S+ +D+Y K G L A ++ +M + +VV++T +I +DGR E F +
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 290 FRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSK 349
+ ++ G+ P+ T++ ++ G ++ M+++GY P LVD SK
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 350 CG----NTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
G + + ++ Q R ++V + SLI G+ + + D AL F L+ G KPD T
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 406 FVGVLSA-------CTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC--VIDLLARSGRFN 456
F V+ C H GL+ F ++ +AD C VI LL + R
Sbjct: 534 FTTVMRVSIMEDAFCKHMKPT-IGLQLFDLMQRNK---ISADIAVCNVVIHLLFKCHRIE 589
Query: 457 EAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLA 512
+A +N+ ++PD + +++ G ++ A+R L ++ P P T +TL
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE-LLKVTPFGPNT-VTLT 646
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/505 (21%), Positives = 207/505 (40%), Gaps = 102/505 (20%)
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNT 139
+E R+ +L P + L++ + K G + A LF M R DL +++T
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 140 MIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMF-RMMQKH 194
+I GY K G L KLF + + D +++ I YV G A ++ RM+ +
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 195 ESSNSNKFT-LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLD 253
S N +T L GL I ++G +++ G++ V +S+L+D + KCG+L
Sbjct: 387 ISPNVVTYTILIKGLCQDGRI---YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 254 EARGIFDQMVD----KDVVSWTTMIHRCFEDG---------------------------- 281
+++ M+ DVV + ++ + G
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 282 -------RREEGFSLFRDLMGSGVRPNEYTFTGVLK------ACADHAAEHLGKEVHGYM 328
R +E +FR + G++P+ TFT V++ A H +G ++ M
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 329 MRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGFA----- 379
R + ++ L KC + AS+ FN + PD+V++ ++I G+
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 380 ------------------------------QNGQPDRALHFFELLLKSGTKPDQITFVGV 409
+N D A+ F ++ + G+KP+ +T+ +
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 410 LSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIID---NMS 466
+ + + ++ + F ++EK G+ + Y+ +ID L + GR +EA NI +
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742
Query: 467 IKPDKFLWASLLGG-CRIHGNIELA 490
+ PD +A L+ G C++ +E A
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAA 767
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 170/394 (43%), Gaps = 41/394 (10%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I LCQ R+ EA + + + PS YS+LI + L G ++ +
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARK 155
P + I L+D +K G + A R +M + ++ +N++I G+ +L ++A K
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 156 LFDEM------PRRDHFSWNAAIS----GYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
+F M P F+ +S + H +P L++F +MQ+++ +S
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK--------IS 569
Query: 206 SGLAAAAAI-----PCLRL--GKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGI 258
+ +A + C R+ + L+ ++ D V ++ ++ Y LDEA I
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 259 FDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACAD 314
F+ + + V+ T +IH ++ + +F + G +PN T+ ++ +
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 315 HAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVS 370
++ M G P + S ++D K G A+ +F+Q PD+V+
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 749
Query: 371 WTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQI 404
+ LI G+ + G+ A +E +L++G KPD +
Sbjct: 750 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 21/314 (6%)
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRD- 292
LD V L++ + G +D+A IF VV ++R + L D
Sbjct: 144 LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADH 203
Query: 293 ---LMGSGVRPNEYTFTG-VLKA--CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
L G+ P+ + G VL A C + L + H +M G+ G + + ++
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKAL--DFHRLVMERGFRVGIVSCNKVLKG 261
Query: 347 YSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
S ++ASR+ + + P P++V++ +LI GF + G+ DRA F+++ + G +PD
Sbjct: 262 LS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
I + ++ AG++ G + F K G+ ++ ID+ +SG A +
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 463 DNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYAN 517
M I P+ + L+ G G I A + + +EP + TY +L + +
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP-SIVTYSSLIDGFCK 438
Query: 518 AGQWAEEAKVRKDM 531
G + +DM
Sbjct: 439 CGNLRSGFALYEDM 452
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 190/442 (42%), Gaps = 62/442 (14%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDRPSPR----LYSTLIAACVRHRALEQGRRVHALT 94
+ IN LC++ A++LL+ +++ +YST+I + ++R ++ +
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
+ P +F + L+ G +DA RL +M +R ++ ++N++I +AK G L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 151 EQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
+A KLFDEM +R + ++N+ I+G+ H R EA ++F +M +
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD----------- 375
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK- 265
CL D V ++ L++ + K + + +F M +
Sbjct: 376 ---------CLP----------------DVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 266 ---DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
+ V++TT+IH F+ + +F+ ++ GV PN T+ +L +
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGF 378
V Y+ + +P + + + + K G + +F + +PD++++ ++I GF
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHT 438
+ G + A F + + G PD T+ ++ A G DK IKE
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG--DKAASA-ELIKEMRSCRFA 587
Query: 439 AD--HYACVIDLLARSGRFNEA 458
D Y V D+L GR ++
Sbjct: 588 GDASTYGLVTDML-HDGRLDKG 608
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 212/512 (41%), Gaps = 96/512 (18%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+N C R+ EAV L+ + +P ++TL+ +H + +
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYAKLGWLEQARK 155
P + +++ K G A L ++M + D+ ++T+I K ++ A
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 156 LFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
LF EM R D F++++ IS ++GR +A + M + + N N T +S + A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI-NPNVVTFNSLIDAF 320
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD----V 267
A L +++ +++ +D + V +++L++ + LDEA+ IF MV KD V
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
V++ T+I+ + + +G LFRD+ G+ N T+T + +HG+
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL---------------IHGF 425
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQ 383
S C N A VF Q+ P+++++ +L+ G +NG+
Sbjct: 426 FQA-----------------SDCDN---AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
++A+ FE L KS +PD T+ + AG V+ G + F S+ K
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK----------- 514
Query: 444 CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE 503
+KPD + +++ G G L + A +++ +
Sbjct: 515 ----------------------GVKPDVIAYNTMISGFCKKG---LKEEAYTLFIKMKED 549
Query: 504 NP----ATYITLANIYANAGQWAEEAKVRKDM 531
P TY TL + G A A++ K+M
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 15/298 (5%)
Query: 252 LDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG 307
LDEA +F +MV +V ++ ++ + + + S + GV N YT+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 308 VLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP--- 364
++ + + G MM++GY P ++L++ + A + +Q+
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 365 -RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
+PD V++T+L+ G Q+ + A+ E ++ G +PD +T+ V++ G D L
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI---IDNMSIKPDKFLWASLLGG 480
+ + EK + Y+ VID L + ++A N+ +DN I+PD F ++SL+
Sbjct: 226 NLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 481 CRIHGNIELAKRAANALFE--IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
+G A R + + E I P N T+ +L + +A G+ E K+ +M R I
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINP-NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 180/458 (39%), Gaps = 62/458 (13%)
Query: 150 LEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEM-FRMMQKHE--SSNSNKFTLSS 206
L++A LF EM + F S +S + ++ +K E + N +T +
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD-- 264
+ L I G +++ G V ++LL+ + + EA + DQMV+
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 265 --KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
D V++TT++H F+ + E +L ++ G +P+ T+ V+ L
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA- 224
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNG 382
++L +K KI + D+V ++++I +
Sbjct: 225 ---------------------LNLLNKMEKGKIEA---------DVVIYSTVIDSLCKYR 254
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
D AL+ F + G +PD T+ ++S + G + E+ + +
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTF 313
Query: 443 ACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFE 499
+ID A+ G+ EAE + D M SI P+ + SL+ G +H ++ A++ +
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 500 IE-PENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVF---- 554
+ + TY TL N + A + + ++ +DM RG+V + + +H F
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV----GNTVTYTTLIHGFFQAS 429
Query: 555 -----------LVGDTSHPKIRDIHEFLGELSKKMKEE 581
+V D HP I + L L K K E
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 172/390 (44%), Gaps = 56/390 (14%)
Query: 43 AINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
+N LC++ + A+ LL +++ P +Y+T+I A ++ + + +
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQAR 154
P + N L+ G +DA RL +M +R ++ +++ +I + K G L +A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 155 KLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
KL+DEM +R D F++++ I+G+ H R EA MF +M +
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--------------- 391
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----D 266
P + V ++ L+ + K +DE +F +M + +
Sbjct: 392 --CFP-------------------NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
V++TT+IH F+ + +F+ ++ GV P+ T++ +L ++ V
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNG 382
Y+ R +P + + +++ K G + +F + +P++V++T+++ GF + G
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSA 412
+ A F + + G PD T+ ++ A
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/574 (20%), Positives = 241/574 (41%), Gaps = 84/574 (14%)
Query: 43 AINALCQQKRLKEAVDLLHHV--DRPSPRL--YSTLIAACVRHR----ALEQGRRVHALT 94
+IN L +L +AV+L + RP P + +S L++A + + G ++ L
Sbjct: 53 SINRL-NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 111
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYAKLGWL 150
S N ++ + L++ + + L+ A + +M + D+ + N+++ G+ +
Sbjct: 112 ISHN----LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 151 EQARKLFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
A L +M + D F++N I G H R EA+ + M
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM--------------- 212
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM---- 262
V G D V + +++ K G +D A + +M
Sbjct: 213 ---------------------VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 263 VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
++ VV + T+I + +LF ++ G+RPN T+ +++ ++
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGF 378
+ M+ +P SAL+D + K G A ++++++ + PD+ +++SLI GF
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHT 438
+ + D A H FEL++ P+ +T+ ++ A VD+G+E F + ++ GL+
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR-GLVGN 430
Query: 439 ADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAAN 495
Y +I ++ + A+ + M + PD ++ LL G +G +E A
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 496 AL--FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHV 553
L ++EP+ TY + AG+ + + + ++G +K V
Sbjct: 491 YLQRSKMEPD-IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-----------VKPNVVT 538
Query: 554 FLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
+ + + + + E L ++MKEEG +PD+
Sbjct: 539 YTTMMSGFCR-KGLKEEADALFREMKEEGPLPDS 571
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 174/376 (46%), Gaps = 26/376 (6%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I+ALC K + +A++L +D RP+ Y++LI + R+ +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLE 151
P + + L+D + K G L +A++L+DEM R D+ +++++I G+ L+
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 152 QARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKFT-LS 205
+A+ +F+ M +D F ++N I G+ R E +E+FR M Q+ N+ +T L
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM--- 262
G A ++ + +V G+ D + +S LLD G ++ A +F+ +
Sbjct: 439 HGFFQARECDNAQI---VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 263 -VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
++ D+ ++ MI + G+ E+G+ LF L GV+PN T+T ++ +
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG---GF 378
+ M G P S + L+ + + G+ ++ + ++ V S IG
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNM 615
Query: 379 AQNGQPDRALHFFELL 394
+G+ D++ F ++L
Sbjct: 616 LHDGRLDKS--FLKML 629
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 212/514 (41%), Gaps = 100/514 (19%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+N C R+ +AV L+ + +P ++TLI RH + +
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC 217
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYAKLGWLEQARK 155
P + +++ K G + A L +M + + +NT+I + A
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 156 LFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
LF EM R + ++N+ I ++GR +A + M + + N N T S+ + A
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAF 336
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD----V 267
L ++++ +++ +D D +S+L++ + LDEA+ +F+ M+ KD V
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
V++ T+I + R +EG LFR++ G+ N T+T + +HG+
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL---------------IHGF 441
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQ 383
+C N +I VF Q+ PD+++++ L+ G NG+
Sbjct: 442 FQA-----------------RECDNAQI---VFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
+ AL FE L +S +PD T+ ++ AG V+ G + F S+ K
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK----------- 530
Query: 444 CVIDLLARSGRFNEAENIIDNMSIKPDKFLWASLLGG-CRIHGNIELAKRAANALF-EIE 501
+KP+ + +++ G CR + K A+ALF E++
Sbjct: 531 ----------------------GVKPNVVTYTTMMSGFCR-----KGLKEEADALFREMK 563
Query: 502 PENP----ATYITLANIYANAGQWAEEAKVRKDM 531
E P TY TL + G A A++ ++M
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/561 (22%), Positives = 228/561 (40%), Gaps = 88/561 (15%)
Query: 109 LLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSW 168
++ + + G L+DAQ M R +G ++L + F D +
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRR---------SGVSRLEIVNSLDSTFSNCGSNDSV-F 168
Query: 169 NAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE-----I 223
+ I YV + REA E F +++ S FT+S A +R+G +
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLR------SKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 224 HGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTMIHRCFE 279
+ + R+G+ ++ + +++ K G +++ Q+ +K D+V++ T+I
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
G EE F L + G G P YT+ V+ H KEV M+R G P S
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+L+ K G+ +VF+ + PDLV ++S++ F ++G D+AL +F +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
++G PD + + ++ G++ + + + ++ M Y ++ L +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT-YNTILHGLCKRKML 461
Query: 456 NEAENIIDNMS---IKPDKFLWASLLGG-CRIHGNIELAKRAANALFEIEPE-----NPA 506
EA+ + + M+ + PD + L+ G C++ GN++ A LF+ E +
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKL-GNLQ----NAMELFQKMKEKRIRLDVV 516
Query: 507 TYITLANIYANAGQWAEEAKVRKDMEIRGIVKKP-------------------GKSWIE- 546
TY TL + + G ++ DM + I+ P + W E
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Query: 547 ----IKRQVHV---FLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT---NFVLHDVEE 596
IK V + + G D FL +KM EG+VPD N +++
Sbjct: 577 ISKNIKPTVMICNSMIKGYCRSGNASDGESFL----EKMISEGFVPDCISYNTLIYG--- 629
Query: 597 EQKEQNLFYHSEKLAVAFGII 617
F E ++ AFG++
Sbjct: 630 -------FVREENMSKAFGLV 643
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/482 (20%), Positives = 198/482 (41%), Gaps = 29/482 (6%)
Query: 44 INALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+NALC+ ++++ L V P Y+TLI+A +E+ + F
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEM----GDRDLCSWNTMIAGYAKLGWLEQARK 155
PG++ N +++ K G A+ +F EM D ++ +++ K G + + K
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 156 LFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKF--TLSSGLA 209
+F +M R D +++ +S + G +AL F +++ N L G
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK---- 265
I + + +++ G +D V ++ +L K L EA +F++M ++
Sbjct: 422 RKGMIS---VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
D + T +I + G + LF+ + +R + T+ +L KE+
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGFAQN 381
M+ P + S LV+ G+ A RV++++ +P ++ S+I G+ ++
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 382 GQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH-GLMHTAD 440
G F E ++ G PD I++ ++ + K ++E+ GL+
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 441 HYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANAL 497
Y ++ R + EAE ++ M + PD+ + ++ G N+ A R + +
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 498 FE 499
+
Sbjct: 719 LQ 720
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/420 (18%), Positives = 168/420 (40%), Gaps = 58/420 (13%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ IN LC+ + + A ++ + R P Y +L+ + + + +V + +
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCS----WNTMIAGYAKLGWLE 151
S + +P + + ++ L+ + G+L A F+ + + L + +I GY + G +
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 152 QARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSG 207
A L +EM ++ D ++N + G EA ++F M + + + +TL+
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER-ALFPDSYTLTIL 486
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDV 267
+ + L+ E+ + + LD V ++ LLD +GK G +D A+ I+ MV K++
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 268 ----VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE 323
+S++ +++ G E F ++ +++ ++P ++K G+
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 324 VHGYMMRVGYDPGSFAGSALVDLYSKCGNTK---------------IASRVF-------- 360
M+ G+ P + + L+ + + N + VF
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG 666
Query: 361 ----NQIPR--------------PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
NQ+ PD ++T +I GF A + +L+ G PD
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 140/623 (22%), Positives = 253/623 (40%), Gaps = 112/623 (17%)
Query: 57 VDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKC 116
+++L RPS +Y I A V+ + +G + K P +FI N L+D K
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG 227
Query: 117 GSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARKLFDEMPRRDH-----FS 167
+ DA++LFDEM R L ++NT+I GY K G E++ K+ + M + DH +
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM-KADHIEPSLIT 286
Query: 168 WNAAISGYVSHGRPREALEMFRMM----------------------QKHESS-------- 197
+N + G G +A + + M +K E++
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 198 ----NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLD 253
N +T S L A + +EI G + GL +EV+++ ++D Y + G L
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 254 EARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEG----------------------- 286
AR + M + D +++ +I R E G E
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 287 ------------FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKE-VHGYMMRVGY 333
F + +++ +G PN ++ G L C ++ L + V M G
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSY-GTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPRP----DLVSWTSLIGGFAQNGQPDRALH 389
P + L+D G + A R ++ + +LV++ +LI G + G+ A
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 390 FFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 449
+ + G KPD T+ ++S AG V + + + +K + G+ T Y +I L
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK-RSGIKPTLKTYHLLISLC 644
Query: 450 ARSGRFNEAENIIDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYI 509
+ G E + MS+KPD ++ +L +HG++E A F ++ + I
Sbjct: 645 TKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA-------FNLQKQMIEKSI 696
Query: 510 TLANIYANA---GQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRD 566
L N+ GQ KV K E+R ++ + +E + + +V H +++D
Sbjct: 697 GLDKTTYNSLILGQL----KVGKLCEVRSLIDEMNAREMEPEADTYNIIV--KGHCEVKD 750
Query: 567 IHEFLGELS--KKMKEEGYVPDT 587
++ ++M+E+G++ D
Sbjct: 751 ---YMSAYVWYREMQEKGFLLDV 770
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/560 (21%), Positives = 236/560 (42%), Gaps = 81/560 (14%)
Query: 55 EAVDLLHHV--DRPSPRL--YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLL 110
+AVDL + RP P + ++ L +A + + E + +S I+ + ++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 111 DLYAKCGSLADAQRLFDEMG-------DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR 163
+ + +C L+ A F MG + D +NT++ G + +A +L D M
Sbjct: 131 NCFCRCRKLSYA---FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 164 DH----FSWNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKFTLSSGLAAAAAIPCLR 218
H + N ++G +G+ +A+ + RM++ N+ T L
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET--GFQPNEVTYGPVLNVMCKSGQTA 245
Query: 219 LGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTMI 274
L E+ + + LD V +S ++D K GSLD A +F++M K D++++ T+I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYD 334
GR ++G L RD++ + PN TF
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTF----------------------------- 336
Query: 335 PGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHF 390
S L+D + K G + A ++ ++ + P+ +++ SLI GF + + + A+
Sbjct: 337 ------SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 391 FELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLA 450
+L++ G PD +TF +++ A +D GLE F + + G++ Y ++
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR-GVIANTVTYNTLVQGFC 449
Query: 451 RSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE-NPA 506
+SG+ A+ + M ++PD + LL G +G +E A + + + E +
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 507 TYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRD 566
Y+ + + NA + + + + ++G +++ + + ++ + +D
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKG---------VKLDARAYNIMISELCR---KD 557
Query: 567 IHEFLGELSKKMKEEGYVPD 586
L +KM EEG+ PD
Sbjct: 558 SLSKADILFRKMTEEGHAPD 577
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 63/303 (20%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALT 94
F I++ ++ +L+EA LL + + P+ Y++LI + LE+ ++ L
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
S P I N L++ Y K + D LF EM R + ++NT++ G+ + G L
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 151 EQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
E A+KLF EM R D S+ + G +G +ALE+F
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF------------------ 496
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGS--LDEARGIFDQM-- 262
G + ++ ++LD ++ ++ ++G C + +D+A +F +
Sbjct: 497 ------------------GKIEKSKMELDIGIY--MIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 263 --VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHL 320
V D ++ MI + LFR + G P+E T+ +++A HL
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA-------HL 589
Query: 321 GKE 323
G +
Sbjct: 590 GDD 592
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 178/414 (42%), Gaps = 23/414 (5%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHV----DRPSPRLYSTLI-AACVRHRALEQGRRVHAL 93
F +N C + R+ EAV L+ + RP STLI C++ R E + +
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL----CSWNTMIAGYAKLGW 149
+ F P +L+ K G+ A A LF +M +R++ ++ +I K G
Sbjct: 202 VEYG-FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 150 LEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
+ A LF+EM + D ++++ I G + G+ + +M R M + T S
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII-PDVVTFS 319
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK 265
+ + L KE++ ++ G+ D + +++L+D + K L EA +FD MV K
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 266 ----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
D+V+++ +I+ + R ++G LFR++ G+ PN T+ ++ +
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLV----SWTSLIGG 377
KE+ M+ G P L+D G A +F ++ + + + +I G
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKE 431
+ D A F L G KPD +T+ ++ G + + F +KE
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 188/429 (43%), Gaps = 31/429 (7%)
Query: 101 PGIFISNRLLDLYAKCGSLADAQRLFD---EMGDR-DLCSWNTMIAGYAKLGWLEQARKL 156
P + L++ + G +++A L D EM R DL + +T+I G G + +A L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 157 FDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHE---SSNSNKFTLSSGLA 209
D M + D ++ ++ G AL++FR M++ S + S
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 210 AAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK---- 265
+ L L E+ G+ D V +S+L+ G D+ + +M+ +
Sbjct: 258 DGSFDDALSLFNEME----MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
DVV+++ +I ++G+ E L+ +++ G+ P+ T+ ++ H ++
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQN 381
M+ G +P S L++ Y K R+F +I P+ +++ +L+ GF Q+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 382 GQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADH 441
G+ + A F+ ++ G P +T+ +L G ++K LE F + +K +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGI 492
Query: 442 YACVIDLLARSGRFNEAENIIDNMS---IKPDKFLWASLLGGCRIHGNIELAKRAANALF 498
Y +I + + + ++A ++ ++S +KPD + ++GG G++ A+ LF
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS----EADMLF 548
Query: 499 EIEPENPAT 507
E+ T
Sbjct: 549 RKMKEDGCT 557
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 21/323 (6%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDRPSPR----LYSTLIAACVRHRALEQGRRVHALTK 95
+ I++LC+ +A+ L + ++ + YS+LI + G ++
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLE 151
N IP + + L+D++ K G L +A+ L++EM R D ++N++I G+ K L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 152 QARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKF-TLS 205
+A ++FD M + D +++ I+ Y R + + +FR + K N+ + TL
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM--- 262
G + L KE+ +V G+ V + LLD G L++A IF++M
Sbjct: 428 LGFCQSGK---LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 263 -VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
+ + + +IH + ++ +SLF L GV+P+ T+ ++ +
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 322 KEVHGYMMRVGYDPGSFAGSALV 344
+ M G P F + L+
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILI 567
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 175/397 (44%), Gaps = 22/397 (5%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
I+ALC ++L A ++ + +P Y TL+ +R L+ ++ + +
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARK 155
+P + L+D K G+ +A D M D+ +L ++NT+I G ++ L+ A +
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 156 LFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
LF M + +++ I Y G ALE F M K + N ++ L +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM-KTKGIAPNIVACNASLYSL 478
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DV 267
A R K+I L GL D V ++ ++ Y K G +DEA + +M++ DV
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
+ ++I+ ++ R +E + +F + ++P T+ +L + E+
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQ 383
M++ G P + + L D K +A ++ ++ PD+ ++ ++I G +NGQ
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVD 420
A+ FF +K PD +T +L A L++
Sbjct: 659 VKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKASLIE 694
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 122/565 (21%), Positives = 220/565 (38%), Gaps = 98/565 (17%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALT 94
+ + L + +++EA++L + + P+ ++TL ++ + ++
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR---DLCSWNTMIAGYAKLGWLE 151
+P +F N ++ K G + +A F +M D + T++ G K +E
Sbjct: 635 MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIE 694
Query: 152 QARK-----LFDEMPRRDHFSWNAAISG----------------YVSHGRPREA----LE 186
A K L++ + + W I V++G R+ +
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 187 MFRMMQKHESSNS-----NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL------- 234
+ R KH + + KFT G+ L +G + ++ D+
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 235 ----DEVVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEG 286
D ++ LLD YGK G +DE ++ +M + + ++ +I + G ++
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 287 FSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL 346
L+ DLM +++ T AC Y P L+D
Sbjct: 875 LDLYYDLMSD----RDFSPT----ACT-------------------YGP-------LIDG 900
Query: 347 YSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPD 402
SK G A ++F + RP+ + LI GF + G+ D A F+ ++K G +PD
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 403 QITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENII 462
T+ ++ G VD+GL YF +KE GL Y +I+ L +S R EA +
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKES-GLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 463 DNM----SIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYA 516
+ M I PD + + SL+ I G +E A + N + +EP N T+ L Y+
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP-NVFTFNALIRGYS 1078
Query: 517 NAGQWAEEAKVRKDMEIRGIVKKPG 541
+G+ V + M G G
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTG 1103
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 42/348 (12%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P Y+ LI + +E + V KS+ IP + N LLD Y K G + +
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 125 LFDEMGDRDLCSWNTM-----IAGYAKLGWLEQARKL-FDEMPRRDH----FSWNAAISG 174
L+ EM + C NT+ I+G K G ++ A L +D M RD ++ I G
Sbjct: 842 LYKEMSTHE-CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 175 YVSHGRPREALEMFRMMQKH----ESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRA 230
GR EA ++F M + + N G A A C + +V+
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR-----MVKE 955
Query: 231 GLDLDEVVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEG 286
G+ D +S L+D G +DE F ++ ++ DVV + +I+ + R EE
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 287 FSLFRDLMGS-GVRPNEYTFTG-VLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV 344
LF ++ S G+ P+ YT+ +L E GK ++ + R G +P F +AL+
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK-IYNEIQRAGLEPNVFTFNALI 1074
Query: 345 DLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQ-----PDRA 387
YS G + A V+ T + GGF+ N P+RA
Sbjct: 1075 RGYSLSGKPEHAYAVYQ----------TMVTGGFSPNTGTYEQLPNRA 1112
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 198/508 (38%), Gaps = 66/508 (12%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALT 94
F I L + ++ EA ++L +D P Y+ LI A R L+ + V
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
K+ P LLD ++ L ++ + EM D+ ++ ++ K G
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 151 EQARKLFDEMPRRDH------FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTL 204
+A D M RD ++N I G + R +ALE+F M+
Sbjct: 380 GEAFDTLDVM--RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME------------ 425
Query: 205 SSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD 264
S G+ A + Y+V +D YGK G A F++M
Sbjct: 426 SLGVKPTA-----------YTYIV-------------FIDYYGKSGDSVSALETFEKMKT 461
Query: 265 K----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHL 320
K ++V+ ++ + GR E +F L G+ P+ T+ ++K +
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 321 GKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIG 376
++ MM G +P ++L++ K A ++F ++ +P +V++ +L+
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G +NG+ A+ FE +++ G P+ ITF + V L+ + + G +
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD-MGCV 640
Query: 437 HTADHYACVIDLLARSGRFNEAENIIDNMS--IKPDKFLWASLLGGCRIHGNIELA-KRA 493
Y +I L ++G+ EA M + PD +LL G IE A K
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 494 ANALFEI--EPENPATYITLANIYANAG 519
N L+ +P N + +I A AG
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAG 728
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 143/599 (23%), Positives = 234/599 (39%), Gaps = 107/599 (17%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVR-HR---ALE----- 85
F ++ALC+ EA D L + P+ Y+TLI +R HR ALE
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 86 ---------------------QGRRVHAL-----TKSSNFIPGIFISNRLLDLYAKCGSL 119
G V AL K+ P I N L AK G
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 120 ADAQRLFDEMGD----RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAA 171
+A+++F + D D ++N M+ Y+K+G +++A KL EM D N+
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 172 ISGYVSHGRPREALEMFRMMQ--KHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVR 229
I+ R EA +MF M+ K + + TL +GL I + E+ +V+
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI---QEAIELFEGMVQ 601
Query: 230 AGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD----KDVVSWTTMIHRCFEDGRREE 285
G + + ++ L D K + A + +M+D DV ++ T+I ++G+ +E
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 286 GFSLFRDLMGSGVRPNEYTFT----GVLKA----------------CADHAAEHLGKEVH 325
F M V P+ T GV+KA CAD A +++
Sbjct: 662 AMCFFHQ-MKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720
Query: 326 GYMM-RVGYDPG-SFA------------GSALVDL--YS-KCGNTKIASRVFNQIPR--- 365
G ++ G D SF+ S LV + YS K N A +F + +
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 366 --PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
P L ++ LIGG + + A F + +G PD T+ +L A +G +D+
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA----ENIIDNMSIKPDKFLWASLLG 479
E + + +T H VI L ++G ++A +++ + P + L+
Sbjct: 841 ELYKEMSTHECEANTITH-NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 480 GCRIHGNIELAKRAANALFE--IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
G G + AK+ + + P N A Y L N + AG+ + K M G+
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRP-NCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 126/595 (21%), Positives = 242/595 (40%), Gaps = 88/595 (14%)
Query: 86 QGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMI 141
+ +++ K +P N ++ Y+K G + +A +L EM + D+ N++I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 142 AGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFR-MMQKHES 196
K +++A K+F M + ++N ++G +G+ +EA+E+F M+QK
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 197 SNSNKF-TLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEA 255
N+ F TL L + L ++ ++ G D ++ ++ K G + EA
Sbjct: 606 PNTITFNTLFDCLCKNDEVT---LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 256 RGIFDQM---VDKDVVSWTTMIHRCFEDGRREEGFSLF----------------RDLMGS 296
F QM V D V+ T++ + E+ + + DL+GS
Sbjct: 663 MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Query: 297 GVRP----NEYTFTGVLKA---CAD----------HAAEHLGKEVHG-------YMMRVG 332
+ N +F+ L A C D ++ +H V G + +G
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKH--NNVSGARTLFEKFTKDLG 780
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRAL 388
P + L+ + +IA VF Q+ PD+ ++ L+ + ++G+ D
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDL 448
++ + + + IT V+S AG VD L+ ++ + TA Y +ID
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 449 LARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFE------ 499
L++SGR EA+ + + M +P+ ++ L+ G G + AA ALF+
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD----AACALFKRMVKEG 956
Query: 500 IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRG----------IVKKPGKSWIEIKR 549
+ P+ TY L + G+ E K+++ G I+ GKS ++
Sbjct: 957 VRPD-LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH-RLEE 1014
Query: 550 QVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDTNFVLHDVEEEQKEQNLF 604
+ +F TS D++ + L + G V + + ++++ E N+F
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTY-NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 180/423 (42%), Gaps = 33/423 (7%)
Query: 107 NRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQA----RKLFD 158
N +L+ G L + +FD M R D ++ T+ + G L+QA RK+ +
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 159 EMPRRDHFSWNAAISGYVSHGRPREALEMFRMM--QKHESSNSNKFTLSSGLAAAAAI-P 215
+ +S+N I + EA+E++R M + S +L GL I
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWT 271
+ L KE+ GL + ++ + + G+ G ++EA I +M D+ DVV++T
Sbjct: 242 VMGLLKEME----TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 272 TMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV 331
+I + + +F + +P+ T+ +L +D+ K+ M +
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVF----NQIPRPDLVSWTSLIGGFAQNGQPDRA 387
G+ P + LVD K GN A +Q P+L ++ +LI G + + D A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 388 LHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 447
L F + G KP T++ + +G LE F +K K G+ + AC
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GI--APNIVACNAS 474
Query: 448 L--LARSGRFNEAENI---IDNMSIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--I 500
L LA++GR EA+ I + ++ + PD + ++ G I+ A + + + E
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 501 EPE 503
EP+
Sbjct: 535 EPD 537
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 121/283 (42%), Gaps = 23/283 (8%)
Query: 269 SWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH----AAEHLGKEV 324
S+ +IH + E ++R ++ G RP+ T++ ++ + L KE
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE- 248
Query: 325 HGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQ 380
M +G P + + + + + G A + ++ PD+V++T LI
Sbjct: 249 ---METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 381 NGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTAD 440
+ D A FE + KPD++T++ +L + +D ++ F S EK G +
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS-VKQFWSEMEKDGHVPDVV 364
Query: 441 HYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGC----RIHGNIELAKRA 493
+ ++D L ++G F EA + +D M I P+ + +L+ G R+ +EL
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 494 ANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
+ ++P TYI + Y +G + + M+ +GI
Sbjct: 425 ES--LGVKP-TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 233/545 (42%), Gaps = 50/545 (9%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD-----RPSPRLYSTLIAACVRHRALEQGRRVHALT 94
F +N C + +L++A+ +L + P Y+T++ A + L + +
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
K + +P N L+ Y K GSL +A ++ + M DLC++N +I G G +
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 151 EQARKLFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
+ +L D M + D ++N I G G EA ++ M+ ++ +N+ T +
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME-NDGVKANQVTHNI 385
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDL-----DEVVWSALLDLYGKCGSLDEARGIFDQ 261
L C +E V+ +D+ D V + L+ Y K G L A + +
Sbjct: 386 SLKWL----CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 262 M----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
M + + ++ T++ ++ + +E +L G +E T+ ++
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTS 373
E+ M +V P ++L+ G T++A F+++ PD ++ S
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 374 LIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH 433
+I G+ + G+ ++A F+ +K KPD T +L+ G+ +K L +F+++ E+
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 434 GLMHTADHYACVIDLLARSGRFNEAENIIDNMS---IKPDKFLWASLLGGCRIHGNI--- 487
+ Y +I + + EA +++ M ++PD+F + S + G +
Sbjct: 622 EVDTVT--YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Query: 488 -ELAKRAANAL------FEIEPE-NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKK 539
EL K+ + ++E E NPAT + + A +++ V ++ RG +K+
Sbjct: 680 DELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSD---VIDELCSRGRLKE 736
Query: 540 PGKSW 544
+S+
Sbjct: 737 HSRSY 741
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 187/493 (37%), Gaps = 90/493 (18%)
Query: 133 DLCSWNTMIAG---YAKLGWLEQARKLFDEMPR----RDHFSWNAAISGYVSHGRPREAL 185
+L + NT++ G Y + AR++FD+M + + ++N ++GY G+ +AL
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL 224
Query: 186 EMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDL 245
M M N + T ++ L A + L KE+ + + GL + V ++ L+
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 246 YGKCGSLDEARGIFDQM---------------------------------------VDKD 266
Y K GSL EA I + M + D
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLK-ACADHAAEHLGKEVH 325
VV++ T+I CFE G E L + GV+ N+ T LK C + E + ++V
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCG-------------------NTKIASRVFNQIPRP 366
+ G+ P L+ Y K G NT + + + + +
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 367 --------------------DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
D V++ +LI GF + + ++AL ++ + K P TF
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTF 524
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM- 465
++ H G + +E F + E GL+ + +I + GR +A +
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAES-GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 466 --SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAE 523
S KPD + LL G G E A N L E + TY T+ + + + E
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKE 643
Query: 524 EAKVRKDMEIRGI 536
+ +ME +G+
Sbjct: 644 AYDLLSEMEEKGL 656
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 115/250 (46%), Gaps = 13/250 (5%)
Query: 168 WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP---CLRLGKEIH 224
++ A+S Y+ G+P AL++F+ M + + N T ++ L P + +E+
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLK-LKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 225 GYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM-----VDKDVVSWTTMIHRCFE 279
+V+ G+ L+ ++ L++ Y G L++A G+ ++M V+ D V++ T++ +
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
GR + L D+ +G+ PN T+ ++ + ++ M + P
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 340 GSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+ L++ G+ + + + + +PD+V++ +LI G + G A E +
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 396 KSGTKPDQIT 405
G K +Q+T
Sbjct: 373 NDGVKANQVT 382
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 187/447 (41%), Gaps = 58/447 (12%)
Query: 44 INALCQQKRLKEA----VDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+N L ++ R +EA L+ +PS Y+TL+ A R + + + + +
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGL 385
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARK 155
P + N +++ ++ G+L A ++F++M + ++NT+I GY K+G LE++ +
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 156 LFDEMPRRDHF-----SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
L D M R + + N + + + + EA + MQ +
Sbjct: 446 LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSY---------------- 489
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG-IFDQM----VDK 265
G+ D V ++ L Y + GS A I +M V
Sbjct: 490 --------------------GVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKP 529
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
+V + T+++ E+G+ EE F + GV PN + F ++K + EV
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQN 381
M G P S L++ +S G+ K ++ + PD+ +++ L G+A+
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARA 649
Query: 382 GQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADH 441
G+P++A + K G +P+ + + ++S AG + K ++ + + GL
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTT 709
Query: 442 YACVIDLLARSGRFNEAENIIDNMSIK 468
Y +I + + +AE ++ +M K
Sbjct: 710 YETLIWGFGEAKQPWKAEELLKDMEGK 736
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/316 (18%), Positives = 125/316 (39%), Gaps = 46/316 (14%)
Query: 266 DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVH 325
DV S T +++ E GR +E S+F L+ G +P+ T+T ++ A H +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 326 GYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQN 381
+ + G P + +A+++ S+ GN A ++F ++ +P ++ +LI G+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 382 GQPDRALHFFELLLKS------------------------------------GTKPDQIT 405
G+ + + +++L+ G KPD +T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI---I 462
F + A G + + + +++ G+ EA +
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 463 DNMSIKPDKFLWASLLGGCRIHGNIELAKRAANAL--FEIEPENPATYITLANIYANAGQ 520
+ + P+ F++ SL+ G +++ + + F ++P+ T+ TL N +++ G
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPD-VVTFSTLMNAWSSVGD 616
Query: 521 WAEEAKVRKDMEIRGI 536
++ DM GI
Sbjct: 617 MKRCEEIYTDMLEGGI 632
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 198/449 (44%), Gaps = 57/449 (12%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y+TL+ + R +++ ++V+ P I+ N++++ Y K G++ +A + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 131 ----DRDLCSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISGYVSHGRPR 182
D D ++ ++I GY + L+ A K+F+EMP RR+ ++ I G R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 183 EALEMFRMMQKHE---SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVW 239
EA+++F M+ E + + + S + L L KE+ G+ + +
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME----ETGIKPNIHTY 361
Query: 240 SALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMG 295
+ L+D ++AR + QM++K +V+++ +I+ + G E+ + +
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 296 SGVRPNEYTFTGVLKA-CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK 354
+ PN T+ ++K C + + +G
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMG--------------------------------- 448
Query: 355 IASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACT 414
+ +++ + PD+V++ SLI G ++G D A L+ G PDQ T+ ++ +
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 415 HAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK---PDK 471
+ V++ + F S+++K G+ Y +ID ++G+ +EA +++ M K P+
Sbjct: 509 KSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 472 FLWASLLGGCRIHGNIELAKRAANALFEI 500
+ +L+ G G ++ A + +I
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKI 596
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/507 (21%), Positives = 206/507 (40%), Gaps = 83/507 (16%)
Query: 36 TNNNFEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVH 91
T + I +LC +R EA++L+ ++ +P+ Y+ LI + E+ R +
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 92 ALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLC----SWNTMIAGYAKL 147
+P + N L++ Y K G + DA + + M R L ++N +I GY K
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK- 440
Query: 148 GWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFT 203
+ +A + ++M R D ++N+ I G G A + +M +++T
Sbjct: 441 SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQWT 499
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
+S + + + ++ L + G++ + V+++AL+D Y K G +DEA + ++M+
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 264 DKD---------------------------------------VVSWTTMIHRCFEDGRRE 284
K+ V + T +IHR +DG +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 285 EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV 344
+S F+ ++ SG +P+ +T+T ++ +++ M G P F S+L+
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 345 DLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNGQPDRALHFFELLL--KSG 398
Y G T A V ++ P ++ SLI H E+ + G
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK------------HLLEMKYGKQKG 727
Query: 399 TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
++P+ ++ T L++K +E H + A Y +I + G A
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVE--------HSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 459 ENIIDNMS----IKPDKFLWASLLGGC 481
E + D+M I P + ++ +LL C
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCC 806
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 175/431 (40%), Gaps = 42/431 (9%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRVHALT 94
+ I++LC+ KR++EA DL +++ P+ +Y+ LI + +++ +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEM---GDRDLCSWNT-MIAGYAKLGWL 150
S N +P N L+ G L +A L ++M G + S +T +I K G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 151 EQARKLFDEM----PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
+ A F +M + D ++ I Y GR +A +M M+++ S + FT SS
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS-PDLFTYSS 677
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLD-----LYGKCGSLDEARGIFDQ 261
+ + ++ + G + + + +L+ YGK +
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 262 MVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
M++ D V L ++ V PN ++ ++ + +
Sbjct: 738 MMEFDTV------------------VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 322 KEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIG 376
++V +M R G P +AL+ K A++V + + P L S LI
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 377 GFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM 436
G + G+ +R F+ LL+ G D++ + ++ GLV+ E F+ + EK+G
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN-VMEKNGCK 898
Query: 437 HTADHYACVID 447
++ Y+ +I+
Sbjct: 899 FSSQTYSLLIE 909
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 200/487 (41%), Gaps = 27/487 (5%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
PS R + ++ R + + V+ +P + N +LD K G L ++
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 126 FDEMGDRDL----CSWNTMIAGYAKLGWLEQARKLFDEMPRRDH----FSWNAAISGYVS 177
+ EM R++ ++N +I G++K G +E+AR+ +M R +S+N I GY
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
G +A + E N+ + +S C + L+ + D V
Sbjct: 321 QGLFDDAWGV-----TDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV 375
Query: 238 VWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDL 293
++ L+ Y K G EA +FD + + +V++ T+I E G E L ++
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 294 MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT 353
+ P+ T+T ++K + + EV+ M+R G P +A + + G++
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 354 KIASRVFNQIP-----RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVG 408
A R+ ++ PDL + I G + G +A+ F + + G PD +T+
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555
Query: 409 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS-- 466
V+ G + + K L + Y +I A++GR +A M
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKR-LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 614
Query: 467 -IKPDKFLWASLLGGCRIHGNIELAKRAANALFEIE-PENPATYITLANIYANAGQWAEE 524
++P+ +LL G GNI+ A R + E P N +Y L + + +W E
Sbjct: 615 GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Query: 525 AKVRKDM 531
K+ K+M
Sbjct: 675 VKLYKEM 681
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 198/457 (43%), Gaps = 67/457 (14%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y+ LI ++ +E+ RR H + S F + N L++ Y K G DA + DEM
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 131 DRDL----CSWNTMIAGYAKLGWLEQARKLFDEMPRRDHFSWNAAISGYVSHGRPREALE 186
+ + ++N I G ++ AR+L M D S+N + GY+ G+ EA
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 187 MFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLY 246
+F LR G +IH + V ++ L+D
Sbjct: 396 LF--------------------------DDLRAG-DIHPSI---------VTYNTLIDGL 419
Query: 247 GKCGSLDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNE 302
+ G+L+ A+ + ++M + DV+++TT++ ++G ++ +++ G++P+
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 303 YTFT----GVLKACADHAAEHLGKEVHGYMMRVGYD---PGSFAGSALVDLYSKCGNTKI 355
Y +T G L+ A L +E+ V D P + +D K GN
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEM------VATDHHAPDLTIYNVRIDGLCKVGNLVK 533
Query: 356 ASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLS 411
A +I R PD V++T++I G+ +NGQ A + ++ +L+ P IT+ ++
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593
Query: 412 ACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS---IK 468
AG +++ +Y +K++ + H A + + ++G +EA + M I
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG-MCKAGNIDEAYRYLCKMEEEGIP 652
Query: 469 PDKFLWASLLG-GCRIHGNIELAKRAANAL-FEIEPE 503
P+K+ + L+ C E+ K L EIEP+
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 164/383 (42%), Gaps = 27/383 (7%)
Query: 36 TNNNFEEAINALCQQKRLKEAVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
T + + I ALC R+ +A +LL + P Y+TL+ ++ + + +
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLE 151
+ + P I N L+D + G+L AQRL +EM + D+ ++ T++ G+ K G L
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 152 QARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSG 207
A +++DEM R+ D +++ G + G +A + M + + +
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK-- 265
+ + L E + R GL D V ++ ++ Y + G AR ++D+M+ K
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 266 --DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACA-----DHAAE 318
V+++ +I+ + GR E+ F ++ GVRPN T +L D A
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 319 HLGKEVHGYMMRVGYDPGSFAGSALV----DLYSKCGNTKIASRVFNQIPRPDLVSWTSL 374
+L K M G P ++ + L+ D K+ + ++ PD + +L
Sbjct: 642 YLCK-----MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Query: 375 IGGFAQNGQPDRALHFFELLLKS 397
++ + R + F E LL S
Sbjct: 697 FKHLEKDHE-SREVEFLERLLLS 718
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/521 (21%), Positives = 215/521 (41%), Gaps = 98/521 (18%)
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL----CSWNTMIAGYAKLGWLEQAR 154
F+P + N +L + + A +++ M + + ++NTM+ K G LE+
Sbjct: 199 FLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVD 258
Query: 155 KLFDEMPRRD----HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
K++ EM RR+ ++N I+G+ +G+ EA
Sbjct: 259 KIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA-------------------------- 292
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSW 270
+ HG + R+G + ++ L++ Y K G D+A G+ D+M++ +
Sbjct: 293 ----------RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPT 342
Query: 271 TTM--IHRCF--EDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
T+ I+ C + GR ++ R+L+ S P+ ++ ++ H +GK V
Sbjct: 343 TSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLM-----HGYIKMGKFVEA 393
Query: 327 YMM----RVG-YDPGSFAGSALVDLYSKCGNTKIASRV----FNQIPRPDLVSWTSLIGG 377
++ R G P + L+D + GN + A R+ Q+ PD++++T+L+ G
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
F +NG A ++ +L+ G KPD + G DK H M
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL-------HEEMV 506
Query: 438 TADH-------YACVIDLLARSGRFNEA---ENIIDNMSIKPDKFLWASLLGGCRIHGNI 487
DH Y ID L + G +A + I + + PD + +++ G +G
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 488 ELAKRAANALF--EIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWI 545
++A+ + + + P + TY L +A AG+ + + +M+ RG+ +P
Sbjct: 567 KMARNLYDEMLRKRLYP-SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV--RPNVM-- 621
Query: 546 EIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPD 586
+ L G I + + +L KM+EEG P+
Sbjct: 622 ----THNALLYGMCKAGNIDEAYRYLC----KMEEEGIPPN 654
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 153/372 (41%), Gaps = 53/372 (14%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCG-SLADAQRLFDEM 129
+S LI+A R E+ V K P + N ++D K G + FDEM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 130 G----DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYVSHGRP 181
D ++N+++A ++ G E AR LFDEM R D FS+N + G+
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 182 REALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSA 241
A E+ A +P R+ + V +S
Sbjct: 391 DLAFEIL-----------------------AQMPVKRIMPNV-------------VSYST 414
Query: 242 LLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSG 297
++D + K G DEA +F +M + D VS+ T++ + GR EE + R++ G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 298 VRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIAS 357
++ + T+ +L K+V M R P S L+D YSK G K A
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 358 RVFNQIP----RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSAC 413
+F + R D+V +++LI +NG A+ + + K G P+ +T+ ++ A
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 414 THAGLVDKGLEY 425
+ +D+ +Y
Sbjct: 595 GRSATMDRSADY 606
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 179/408 (43%), Gaps = 55/408 (13%)
Query: 116 CGSLADAQRLFDEMGDRDLCS----------------------WNTMIAGYAKLGWLEQA 153
CGS D + E+G+R+ C + MI+ + G + A
Sbjct: 194 CGS-DDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIA 252
Query: 154 RKLFDEMPRRDH----FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLA 209
+++F+ + ++++A IS Y G EA+ +F M++ + L L
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE--------YGLRPNLV 304
Query: 210 AAAAI--PCLRLGKEIHGY------LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQ 261
A+ C + G E + R G+ D + +++LL + + G + AR +FD+
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 262 M----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAA 317
M +++DV S+ T++ + G+ + F + + + PN +++ V+ A
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 318 EHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTS 373
+ G M +G + + L+ +Y+K G ++ A + ++ + D+V++ +
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 374 LIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH 433
L+GG+ + G+ D F + + P+ +T+ ++ + GL + +E F K
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA- 543
Query: 434 GLMHTADHYACVIDLLARSGRFNEAENIIDNMS---IKPDKFLWASLL 478
GL Y+ +ID L ++G A ++ID M+ I P+ + S++
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 154/387 (39%), Gaps = 73/387 (18%)
Query: 65 RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQR 124
+P +++L+A C R E R + + +F N LLD K G + A
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFE 395
Query: 125 LFDEMGDR----DLCSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISGYV 176
+ +M + ++ S++T+I G+AK G ++A LF EM D S+N +S Y
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Query: 177 SHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDE 236
GR EAL++ R M G+ D
Sbjct: 456 KVGRSEEALDILREM------------------------------------ASVGIKKDV 479
Query: 237 VVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
V ++ALL YGK G DE + +F +M V ++++++T+I + G +E +FR+
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDL------ 346
+G+R + ++ ++ A + + M + G P ++++D
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 347 ------YSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFA-----------QNGQPDRA-- 387
YS G+ +S + + + L G + G + +
Sbjct: 600 MDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI 659
Query: 388 LHFFELLLKSGTKPDQITFVGVLSACT 414
L F + + KP+ +TF +L+AC+
Sbjct: 660 LEVFRKMHQLEIKPNVVTFSAILNACS 686
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 10/206 (4%)
Query: 340 GSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
SA++ + G IA R+F + ++++LI + ++G + A+ F +
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
+ G +P+ +T+ V+ AC G+ K + F +++G+ + ++ + +R G +
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 456 NEAENIIDNMS---IKPDKFLWASLLGGCRIHGNIELAKR--AANALFEIEPENPATYIT 510
A N+ D M+ I+ D F + +LL G ++LA A + I P N +Y T
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP-NVVSYST 414
Query: 511 LANIYANAGQWAEEAKVRKDMEIRGI 536
+ + +A AG++ E + +M GI
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 193/442 (43%), Gaps = 22/442 (4%)
Query: 44 INALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+N C KR+ EAV L+ + +P+ ++TLI H + + +
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC 217
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL----CSWNTMIAGYAKLGWLEQARK 155
P + +++ K G A L ++M L +NT+I G K ++ A
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 156 LFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
LF EM R + ++++ IS ++GR +A + M + + N + FT S+ + A
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPDVFTFSALIDAF 336
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DV 267
L ++++ +V+ +D V +S+L++ + LDEA+ +F+ MV K DV
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 268 VSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
V++ T+I + R EEG +FR++ G+ N T+ +++ + +E+
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQ 383
M+ G P + L+D K G + A VF + R P + ++ +I G + G+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 443
+ F L G KPD + + ++S G ++ F +KE G + + Y
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYN 575
Query: 444 CVIDLLARSGRFNEAENIIDNM 465
+I R G + +I M
Sbjct: 576 TLIRARLRDGDREASAELIKEM 597
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 177/376 (47%), Gaps = 26/376 (6%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I+ LC+ K + +A++L ++ RP+ YS+LI+ + R+ +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL----CSWNTMIAGYAKLGWLE 151
P +F + L+D + K G L +A++L+DEM R + +++++I G+ L+
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 152 QARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKFT-LS 205
+A+++F+ M + D ++N I G+ + R E +E+FR M Q+ N+ + L
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM--- 262
GL A + +EI +V G+ + + ++ LLD K G L++A +F+ +
Sbjct: 439 QGLFQAGDCD---MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 263 -VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
++ + ++ MI + G+ E+G+ LF +L GV+P+ + ++ ++
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG---GF 378
+ M G P S + L+ + G+ + ++ + ++ S IG
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Query: 379 AQNGQPDRALHFFELL 394
+G+ D++ F ++L
Sbjct: 616 LHDGRLDKS--FLDML 629
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 118/585 (20%), Positives = 246/585 (42%), Gaps = 86/585 (14%)
Query: 34 AKTNNNFEEAI--NALCQQKRLKEAVDLLHHV--DRPSPRL--YSTLIAACVRHR----A 83
KT+ ++ E + N L + K L +AV L + RP P + +S L++A +
Sbjct: 42 GKTSYDYREKLSRNGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVV 100
Query: 84 LEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNT 139
+ G ++ L N + + L++ + + L A + +M + ++ + ++
Sbjct: 101 ISLGEQMQNLGIPHNH----YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 156
Query: 140 MIAGYAKLGWLEQARKLFDEM----PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHE 195
++ GY + +A L D+M + + ++N I G H + EA+ + M
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM---- 212
Query: 196 SSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEA 255
V G D V + +++ K G D A
Sbjct: 213 --------------------------------VAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 256 RGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA 311
+ ++M ++ V+ + T+I + ++ +LF+++ G+RPN T++ ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 312 CADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PD 367
++ + M+ +P F SAL+D + K G A ++++++ + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 368 LVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFH 427
+V+++SLI GF + + D A FE ++ PD +T+ ++ V++G+E F
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 428 SIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIH 484
+ ++ GL+ Y +I L ++G + A+ I M + P+ + +LL G +
Sbjct: 421 EMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 485 GNIELAKRAANAL--FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGK 542
G +E A L ++EP TY + AG+ + + ++ ++G+ KP
Sbjct: 480 GKLEKAMVVFEYLQRSKMEP-TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV--KP-- 534
Query: 543 SWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
+ + F + E L K+MKE+G +P++
Sbjct: 535 DVVAYNTMISGFCRKGS--------KEEADALFKEMKEDGTLPNS 571
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 174/376 (46%), Gaps = 25/376 (6%)
Query: 97 SNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDL----CSWNTMIAGYAKLGWLEQ 152
+ F +++ N L++ + K G+++DAQ++FDE+ R L S+NT+I GY K+G L++
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 153 ARKLFDEM----PRRDHFSWNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKF-TLSS 206
+L +M R D F+++A I+ + A +F M ++ N F TL
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK- 265
G + I L KE + ++ GL D V+++ L++ + K G L AR I D M+ +
Sbjct: 354 GHSRNGEID---LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 266 ---DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
D +++TT+I G E + +++ +G+ + F+ ++ +
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGF 378
M+R G P + ++D + K G+ + ++ ++ P +V++ L+ G
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 379 AQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHT 438
+ GQ A + +L G PD IT+ +L H + Y K + G++
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQ--KPEIGIVAD 586
Query: 439 ADHYACVIDLLARSGR 454
Y +++ L R+ +
Sbjct: 587 LASYKSIVNELDRASK 602
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 176/392 (44%), Gaps = 30/392 (7%)
Query: 166 FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKE--I 223
F +A + Y G +A++ FR+ +KH +F + ++L I
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKH------RFDVPIRGCGNLLDRMMKLNPTGTI 224
Query: 224 HGY---LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD----VVSWTTMIHR 276
G+ ++ AG L+ V++ L++ + K G++ +A+ +FD++ + VVS+ T+I+
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 277 CFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPG 336
+ G +EGF L + S RP+ +T++ ++ A + M + G P
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 337 SFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNGQPDRALHFFE 392
+ L+ +S+ G + + ++ +PD+V + +L+ GF +NG A + +
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 393 LLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARS 452
+++ G +PD+IT+ ++ G V+ LE + +++G+ ++ ++ + +
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM-DQNGIELDRVGFSALVCGMCKE 463
Query: 453 GRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE----NP 505
GR +AE + M IKPD + ++ G+ A+ L E++ + +
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD---AQTGFKLLKEMQSDGHVPSV 520
Query: 506 ATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
TY L N GQ + M G+V
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 189/437 (43%), Gaps = 22/437 (5%)
Query: 66 PSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRL 125
P Y+TLI C R ++ +V K++ F N LLD+Y K +A ++
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 126 FDEMG----DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISGYVS 177
+EM + ++N++I+ YA+ G L++A +L ++M + D F++ +SG+
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 178 HGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEV 237
G+ A+ +F M ++ N T ++ + +I + GL D V
Sbjct: 397 AGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 238 VWSALLDLYGKCGSLDEARGIFDQMVDKDVV----SWTTMIHRCFEDGRREEGFSLFRDL 293
W+ LL ++G+ G E G+F +M V ++ T+I G E+ +++R +
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 294 MGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT 353
+ +GV P+ T+ VL A A ++V M P +L+ Y+
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 354 ----KIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGV 409
+A V++ + P V +L+ ++ A F L + G PD T +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 410 LSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM---S 466
+S +V K +KE+ G + Y ++ + +RS F ++E I+ +
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKER-GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Query: 467 IKPDKFLWASLL-GGCR 482
IKPD + +++ CR
Sbjct: 695 IKPDIISYNTVIYAYCR 711
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 146/358 (40%), Gaps = 61/358 (17%)
Query: 234 LDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSL 289
LD V + ++ + GK G + A +F+ + + DV S+T++I GR E ++
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 290 FRDL---------------------MGS---------------GVRPNEYTFTGVLKACA 313
F+ + MG+ G+ P+ YT+ ++ C
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 314 DHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLV 369
+ +V M G+ +AL+D+Y K K A +V N++ P +V
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
++ SLI +A++G D A+ + + GTKPD T+ +LS AG V+ + F +
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMSI---KPDKFLWASLLG------- 479
+ G + I + G+F E I D +++ PD W +LL
Sbjct: 411 RNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 480 GCRIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIV 537
+ G + KRA F E E T+ TL + Y+ G + + V + M G+
Sbjct: 470 DSEVSGVFKEMKRAG---FVPERE---TFNTLISAYSRCGSFEQAMTVYRRMLDAGVT 521
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/448 (19%), Positives = 186/448 (41%), Gaps = 26/448 (5%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I+A + L EA++L + + +P Y+TL++ R +E + +
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYAKLGWLE 151
++ P I N + +Y G + ++FDE+ D+ +WNT++A + + G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 152 QARKLFDEM------PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
+ +F EM P R+ F N IS Y G +A+ ++R M + T +
Sbjct: 472 EVSGVFKEMKRAGFVPERETF--NTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYN 528
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSL----DEARGIFDQ 261
+ LAA A +++ + +E+ + +LL Y + A ++
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 262 MVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
+++ V T++ C + E F +L G P+ T ++
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI----PRPDLVSWTSLIGG 377
V YM G+ P ++L+ ++S+ + + + +I +PD++S+ ++I
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+ +N + A F + SG PD IT+ + + + ++ + + KHG
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI-KHGCRP 767
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNM 465
+ Y ++D + R +EA+ ++++
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 98/219 (44%), Gaps = 9/219 (4%)
Query: 56 AVDLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAK 115
A ++ V P L TL+ C + L + R + K F P I N ++ +Y +
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641
Query: 116 CGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARKLFDEM----PRRDHFS 167
+A A + D M +R + ++N+++ +++ ++ ++ E+ + D S
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS 701
Query: 168 WNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYL 227
+N I Y + R R+A +F M ++ + T ++ + + AA + Y+
Sbjct: 702 YNTVIYAYCRNTRMRDASRIFSEM-RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 228 VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKD 266
++ G ++ +++++D Y K DEA+ + + + D
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 203/489 (41%), Gaps = 21/489 (4%)
Query: 67 SPRLYSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLF 126
S Y+T+I + +++ +P N ++ +Y G L + L
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 127 DEMG---DRDLCSWNTMIAGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISGYVSHG 179
M D ++N +I+ + K +E+A F EM + D S+ + +
Sbjct: 357 KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 180 RPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVW 239
EA + M ++ +++T S+ L AG ++ +
Sbjct: 417 MVEEAEGLIAEMD-DDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGY 474
Query: 240 SALLDLYGKCGSLDEARGIF---DQMVDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGS 296
SA +D YG+ G L EA +F ++ + V+ + MI E+ LF +M
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 297 GVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIA 356
GV P++ T+ +++ A H G+ M GY A++ + K G +A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 357 SRVFNQIP----RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSA 412
V+ ++ PD+V + LI FA G +A+ + E + ++G + + + ++
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKL 654
Query: 413 CTHAGLVDKGLEYFHSIKEKHGLMHTADHYA--CVIDLLARSGRFNEAENIIDNMSIK-- 468
T G +D+ + + + D Y C+I+L + +AE I D+M +
Sbjct: 655 YTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE 714
Query: 469 PDKFLWASLLGGCRIHGNIELAKRAANALFEIEP-ENPATYITLANIYANAGQWAEEAKV 527
++F +A +L + +G E A + A + E++ +P +Y ++ ++A G++ E +
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 528 RKDMEIRGI 536
K+M GI
Sbjct: 775 FKEMVSSGI 783
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 105/250 (42%), Gaps = 52/250 (20%)
Query: 71 YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG 130
Y +I++ V+ L V+ N P + + L++ +A G++ A + M
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 131 DRDL----CSWNTMIAGYAKLGWLEQARKLFDEMPRR-------DHFSWNAAISGYVSHG 179
+ + +N++I Y K+G+L++A ++ ++ + D ++ N I+ Y
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERS 697
Query: 180 RPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVW 239
R+A +F M++ +N E +
Sbjct: 698 MVRKAEAIFDSMKQRGEAN-------------------------------------EFTF 720
Query: 240 SALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG 295
+ +L +Y K G +EA I QM + D +S+ +++ DGR +E F++++
Sbjct: 721 AMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS 780
Query: 296 SGVRPNEYTF 305
SG++P++ TF
Sbjct: 781 SGIQPDDSTF 790
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 21/253 (8%)
Query: 225 GYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF----------DQMVDKDVVSWTTMI 274
G + + G+ DEV +L +Y K +A F D V ++ TMI
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYM--MRVG 332
+ G+ +E F+ ++ G+ P TF ++ ++ LG EV M M++
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG--QLG-EVTSLMKTMKLH 362
Query: 333 YDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNGQPDRAL 388
P + + L+ L++K + + A F ++ +PD VS+ +L+ F+ + A
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAE 422
Query: 389 HFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDL 448
+ + D+ T + A +++K +F + +++ Y+ ID
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM--SSEGYSANIDA 480
Query: 449 LARSGRFNEAENI 461
G +EAE +
Sbjct: 481 YGERGYLSEAERV 493
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 166/383 (43%), Gaps = 56/383 (14%)
Query: 43 AINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSN 98
+N LC++ + A +LL+ ++ + +YST+I + ++R + + ++
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQAR 154
P + + L+ +DA RL +M +R ++ ++N +I + K G L +A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 155 KLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
KL+DEM +R D F++++ I+G+ H R EA MF +M +
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--------------- 395
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK----D 266
P + V ++ L++ + K +DE +F +M + +
Sbjct: 396 --CFP-------------------NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
V++TT+IH F+ + +F+ ++ GV PN T+ +L + V
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNG 382
Y+ R +P + + +++ K G + +F + +PD++ + ++I GF + G
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 383 QPDRALHFFELLLKSGTKPDQIT 405
+ A F + + G PD T
Sbjct: 555 LKEEADALFRKMREDGPLPDSGT 577
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/515 (20%), Positives = 233/515 (45%), Gaps = 48/515 (9%)
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYAKLGWLEQARK 155
+P IF N+LL AK L ++M +L ++N +I + + + A
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 156 LFDEMPRRDH----FSWNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKFT-LSSGL- 208
L +M + + + ++ ++GY R +A+ + +M++ ++ FT L GL
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 209 ---AAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM--- 262
A+ A+ + +V+ G + V + +++ K G +D A + ++M
Sbjct: 202 LHNKASEAVALV-------DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 263 -VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
++ +VV ++T+I + ++ +LF ++ GVRPN T++ ++ ++
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGG 377
+ M+ +P +AL+D + K G A ++++++ + PD+ +++SLI G
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
F + + D A H FEL++ P+ +T+ +++ A +D+G+E F + ++ GL+
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVG 433
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAA 494
Y +I ++ + A+ + M + P+ + +LL G +G +E A
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 495 NAL--FEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVH 552
L ++EP TY + AG+ + + + ++G +K V
Sbjct: 494 EYLQRSKMEP-TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-----------VKPDVI 541
Query: 553 VFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
++ + + + + E L +KM+E+G +PD+
Sbjct: 542 IYNTMISGFCR-KGLKEEADALFRKMREDGPLPDS 575
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 143/290 (49%), Gaps = 21/290 (7%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I++LC+ + +A++L ++ RP+ YS+LI+ + R+ +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLE 151
P + N L+D + K G L +A++L+DEM R D+ +++++I G+ L+
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 152 QARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKF-TLS 205
+A+ +F+ M +D F ++N I+G+ R E +E+FR M Q+ N+ + TL
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM--- 262
G A ++ + +V G+ + + ++ LLD K G L++A +F+ +
Sbjct: 443 HGFFQARDCDNAQM---VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 263 -VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA 311
++ + ++ MI + G+ E+G+ LF L GV+P+ + ++
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 125/562 (22%), Positives = 229/562 (40%), Gaps = 85/562 (15%)
Query: 55 EAVDLLHHV--DRPSPRL--YSTLIAACVRHRALEQGRRVHALTKSSNFIPGI----FIS 106
+A+DL + RP P + +S L +A + + Q V AL K + GI +
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTK---QYDLVLALCKQME-LKGIAHNLYTL 126
Query: 107 NRLLDLYAKCGSLADAQRLFDEMG-------DRDLCSWNTMIAGYAKLGWLEQARKLFDE 159
+ +++ + +C L A F MG + + +++T+I G G + +A +L D
Sbjct: 127 SIMINCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 160 MPRRDH----FSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIP 215
M H + N ++G G+ EA+ + M ++ N T L
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSG 242
Query: 216 CLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWT 271
L E+ + + LD V +S ++D K GSLD A +F++M + +++++
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 272 TMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV 331
+I GR ++G L RD++ + PN TF+ ++ + +E+H M+
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 332 GYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFF 391
G PD +++TSLI GF + D+A
Sbjct: 363 GI-------------------------------APDTITYTSLIDGFCKENHLDKANQMV 391
Query: 392 ELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLAR 451
+L++ G P+ TF +++ A +D GLE F + + G++ Y +I
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCE 450
Query: 452 SGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENPATY 508
G+ N A+ + M + P+ + LL G +G E +A +IE
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE---KALEIFEKIEKSKMELD 507
Query: 509 ITLANI----YANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKI 564
I + NI NA + + + + ++G+ KPG + + ++G
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV--KPGV-------KTYNIMIGGLCKKGP 558
Query: 565 RDIHEFLGELSKKMKEEGYVPD 586
E L +KM+E+G+ PD
Sbjct: 559 LSEAEL---LFRKMEEDGHAPD 577
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 197/475 (41%), Gaps = 60/475 (12%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHV----DRPSPRLYSTLI-AACVRHRALEQGRRVHALT 94
F IN LC + R+ EA++L+ + +P +TL+ C+ + E + +
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
+ P +L++ K G A A L +M +R D ++ +I G K G L
Sbjct: 221 EYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 151 EQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
+ A LF+EM + + ++N I G+ + GR + ++ R M K + N N T S
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI-NPNVVTFSV 338
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV--- 263
+ + LR +E+H ++ G+ D + +++L+D + K LD+A + D MV
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 264 -DKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGK 322
D ++ ++ +I+ + R ++G LFR + GV + T+ +++ + ++ K
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 323 EVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----------------- 365
E+ M+ P L+D G ++ A +F +I +
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 366 ----------------------PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQ 403
P + ++ +IGG + G A F + + G PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 404 ITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEA 458
T+ ++ A G K ++ +K + G A VID+L+ GR ++
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELK-RCGFSVDASTIKMVIDMLS-DGRLKKS 631
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 213/496 (42%), Gaps = 38/496 (7%)
Query: 113 YAKCGSLADAQRLFDEMGDRD----LCSWNTMIAGYAKLGWLEQARKLFDEMPRR----D 164
Y + G + +A +F+ M D + S+N +++ G+ +QA K++ M R D
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 165 HFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIH 224
+S+ + + RP AL + M + N + + G E+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMS-SQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 225 GYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV----SWTTMIHRCFED 280
G ++ +G+ L ++ LL + K G + E + D+++ + V+ ++ I +
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 281 GRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAG 340
G + + L+ G +P+ T+ ++ ++ + G M+ G +P S+
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 341 SALVDLYSKCGNTKIASR-----VFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+ L+ Y K G ++A R VFN PD ++ SLI G G+ +RAL F L
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
G KP+ I + ++ ++ G++ + + + + EK GL+ + +++ L + G
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCV 442
Query: 456 NEAENIIDNMSIK---PDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYIT 510
++A+ ++ M K PD F + L+ G +E A + + + ++P+ TY +
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD-VYTYNS 501
Query: 511 LANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEF 570
L N ++ + + K M +G + F + S + R + E
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAP-----------NLFTFNILLESLCRYRKLDEA 550
Query: 571 LGELSKKMKEEGYVPD 586
LG L ++MK + PD
Sbjct: 551 LG-LLEEMKNKSVNPD 565
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/514 (19%), Positives = 202/514 (39%), Gaps = 63/514 (12%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDRPSPRL----YSTLIAACVRHRALEQGRRVHALT 94
+F + + C+ R A+ LL+++ + Y T++ +G +
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWL 150
+S + N+LL + K G + + ++L D++ R +L ++N I G + G L
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 151 EQARK----LFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSS 206
+ A + L ++ P+ D ++N I G + + +EA E++ +E + +T ++
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA-EVYLGKMVNEGLEPDSYTYNT 326
Query: 207 GLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC--GSLDEARGIFDQMVD 264
+A ++L + I G V G D+ + +L+D G C G + A +F++ +
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID--GLCHEGETNRALALFNEALG 384
Query: 265 K----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT----GVLKACADHA 316
K +V+ + T+I G E L ++ G+ P TF G+ K
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 317 AEHLGKE----------------VHGY---------------MMRVGYDPGSFAGSALVD 345
A+ L K +HGY M+ G DP + ++L++
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 346 LYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKP 401
K + + + P+L ++ L+ + + D AL E + P
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 402 DQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENI 461
D +TF ++ G +D F ++E + + + Y +I AE +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 462 IDNM---SIKPDKFLWASLLGGCRIHGNIELAKR 492
M + PD + + ++ G GN+ L +
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 187/477 (39%), Gaps = 72/477 (15%)
Query: 181 PREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLV----RAGLDLDE 236
P +ALEMF M+K K TLS+ + + + + LV G + E
Sbjct: 20 PMKALEMFNSMRKEVGF---KHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLE 76
Query: 237 VVWSALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRD 292
V+ + YG+ G + EA +F++M + V S+ ++ + G ++ ++
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR 136
Query: 293 LMGSGVRPNEYTFTGVLKA-CAD---HAAEHL---------------------------- 320
+ G+ P+ Y+FT +K+ C HAA L
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 321 ---GKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTS 373
G E+ G M+ G + L+ + K G+ K ++ +++ + P+L ++
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 374 LIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVL-SACTHAGLVDKGLEYFHSIKEK 432
I G Q G+ D A+ L++ G KPD IT+ ++ C ++ + E +
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA--EVYLGKMVN 314
Query: 433 HGLMHTADHYACVIDLLARSGRFNEAENIIDNMSIK---PDKFLWASLLGGCRIHGNIEL 489
GL + Y +I + G AE I+ + PD+F + SL+ G G
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 490 AKRAAN-ALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIK 548
A N AL + N Y TL +N G E A++ +M +G++ + I +
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 549 RQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT---NFVLHDVEEEQKEQN 602
+ V D L K M +GY PD N ++H + K +N
Sbjct: 435 GLCKMGCVSDADG------------LVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 180/433 (41%), Gaps = 31/433 (7%)
Query: 40 FEEAINALCQQKRLKEA-VDLLHHVDR---PSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I LC+ + +EA V L V+ P Y+TLIA + ++ R+
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLE 151
+ F+P F L+D G A LF+E + ++ +NT+I G + G +
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 152 QARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSG 207
+A +L +EM + ++N ++G G +A + ++M + + FT +
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI-SKGYFPDIFTFNIL 467
Query: 208 LAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDK-- 265
+ + + EI ++ G+D D +++LL+ K ++ + MV+K
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 266 --DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKA-CA----DHAAE 318
++ ++ ++ + +E L ++ V P+ TF ++ C D A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 319 HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSL 374
K Y +V ++ + ++ +++ N +A ++F ++ PD ++ +
Sbjct: 588 LFRKMEEAY--KVSSSTPTY--NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 375 IGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHG 434
+ GF + G + F ++++G P T V++ V + H + +K G
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK-G 702
Query: 435 LMHTADHYACVID 447
L+ A + C +D
Sbjct: 703 LVPEAVNTICDVD 715
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 154/314 (49%), Gaps = 27/314 (8%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLI-AACVRHRALEQGRRVHALT 94
+ I++LC+ KR+ +A D ++R P+ Y+ L+ C R + R + +
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMG----DRDLCSWNTMIAGYAKLGWL 150
K P + + LLD + K G + +A+ LF+EM D D+ +++++I G +
Sbjct: 253 KK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 151 EQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKF-TL 204
++A ++FD M + D S+N I+G+ R + +++FR M Q+ SN+ + TL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 205 SSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC--GSLDEARGIFDQM 262
G A + +E + G+ D +W+ + L G C G L++A IF+ M
Sbjct: 372 IQGFFQAGDVD---KAQEFFSQMDFFGISPD--IWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 263 ----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAE 318
+D D+V++TT+I + G+ EE +SLF L G++P+ T+T ++
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 319 HLGKEVHGYMMRVG 332
H + ++ M + G
Sbjct: 487 HEVEALYTKMKQEG 500
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 183/407 (44%), Gaps = 20/407 (4%)
Query: 150 LEQARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
L A LF +M + F +N +S V + + + + M+ N + +T +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-DLYTFN 124
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD- 264
+ + L I G +++ G + D V +L++ + + + +A + D+MV+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 265 ---KDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
D+V++ +I + R + F F+++ G+RPN T+T ++ + +
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGG 377
+ M++ P SAL+D + K G A +F ++ R PD+V+++SLI G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 378 FAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
+ + D A F+L++ G D +++ +++ A V+ G++ F + ++ GL+
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVS 363
Query: 438 TADHYACVIDLLARSGRFNEAENIIDNMS---IKPDKFLWASLLGGCRIHGNIELAKRAA 494
Y +I ++G ++A+ M I PD + + LLGG +G +E A
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 495 NALFEIEPE-NPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKP 540
+ + E + + TY T+ G+ E + + ++G+ KP
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL--KP 468
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 163/347 (46%), Gaps = 22/347 (6%)
Query: 109 LLDLYAKCGSLADAQRLFDEMGD----RDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR- 163
L++ + + ++DA L D+M + D+ ++N +I K + A F E+ R+
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 164 ---DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLG 220
+ ++ A ++G + R +A + M K + + N T S+ L A +
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEA 279
Query: 221 KEIHGYLVRAGLDLDEVVWSALLDLYGKC--GSLDEARGIFDQMVDK----DVVSWTTMI 274
KE+ +VR +D D V +S+L++ G C +DEA +FD MV K DVVS+ T+I
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLIN--GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 275 HRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYD 334
+ + R E+G LFR++ G+ N T+ +++ +E M G
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 335 PGSFAGSALVDLYSKCGNTKIASRVFNQIPRP----DLVSWTSLIGGFAQNGQPDRALHF 390
P + + L+ G + A +F + + D+V++T++I G + G+ + A
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 391 FELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 437
F L G KPD +T+ ++S GL+ + +E ++ ++ GLM
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE-VEALYTKMKQEGLMK 503
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 166/391 (42%), Gaps = 55/391 (14%)
Query: 99 FIPGIFISNRLLDLYAKCGSLADAQRLFDE---MGDR-DLCSWNTMIAGYAKLGWLEQAR 154
F P + LL+ Y + DA LFD+ MG + ++ ++ T+I K L A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 155 KLFDEM----PRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAA 210
+LF++M R + ++NA ++G GR +A + R M K N T ++ + A
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE-PNVITFTALIDA 267
Query: 211 AAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM----VDKD 266
+ L KE++ +++ + D + +L++ G LDEAR +F M +
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 267 VVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHG 326
V +TT+IH + R E+G +F ++ GV N T+T
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT-------------------- 367
Query: 327 YMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNG 382
L+ Y G +A VFNQ+ PD+ ++ L+ G NG
Sbjct: 368 ---------------VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNG 412
Query: 383 QPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 442
+ ++AL FE + K + +T+ ++ G V+ + F S+ K G+ Y
Sbjct: 413 KVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPNVITY 471
Query: 443 ACVIDLLARSGRFNEAENIIDNMSIKPDKFL 473
+I R G +EA+++ M K D FL
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKM--KEDGFL 500
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 169/375 (45%), Gaps = 27/375 (7%)
Query: 225 GYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV----DKDVVSWTTMIHRCFED 280
G +++ G + D V +++LL+ Y +++A +FDQ++ +VV++TT+I RC
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI-RCLCK 200
Query: 281 GRR-EEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
R LF + +G RPN T+ ++ + + MM+ +P
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+AL+D + K G A ++N + + PD+ ++ SLI G G D A F L+
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
++G P+++ + ++ + V+ G++ F+ + +K G++ Y +I GR
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRP 379
Query: 456 NEAENIIDNMSIK---PDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE-NPATYITL 511
+ A+ + + MS + PD + LL G +G +E A + + E + N TY +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 512 ANIYANAGQWAEEAKVRKDMEIRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFL 571
G+ + + + +G +K V + + + IHE
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKG-----------MKPNVITYTTMISGFCRRGLIHE-A 487
Query: 572 GELSKKMKEEGYVPD 586
L KKMKE+G++P+
Sbjct: 488 DSLFKKMKEDGFLPN 502
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 139/317 (43%), Gaps = 25/317 (7%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHV----DRPSPRLYSTLIAA-CVRHRALEQGRRVHAL 93
+ I LC+ + L AV+L + + RP+ Y+ L+ C R + + +
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGW 149
K P + L+D + K G L +A+ L++ M D+ ++ ++I G G
Sbjct: 250 MKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 150 LEQARKLFDEMPRRDHFS----WNAAISGYVSHGRPREALEMF-RMMQKHESSNSNKFTL 204
L++AR++F M R + + I G+ R + +++F M QK +N+ +T+
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 205 SSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKC--GSLDEARGIFDQM 262
P + +E+ + D ++ LLD G C G +++A IF+ M
Sbjct: 369 LIQGYCLVGRP--DVAQEVFNQMSSRRAPPDIRTYNVLLD--GLCCNGKVEKALMIFEYM 424
Query: 263 ----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAE 318
+D ++V++T +I + G+ E+ F LF L G++PN T+T ++
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 319 HLGKEVHGYMMRVGYDP 335
H + M G+ P
Sbjct: 485 HEADSLFKKMKEDGFLP 501
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 23/286 (8%)
Query: 39 NFEEAINALCQQKRLKEAV----DLLHHVDRPSPRLYSTLIAACVRHRALEQGRRVHALT 94
+ + LC+ R +A D++ P+ ++ LI A V+ L + + ++ +
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 95 KSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCS-----WNTMIAGYAKLGW 149
+ P +F L++ G L +A+++F M +R+ C + T+I G+ K
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM-ERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 150 LEQARKLFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKF--T 203
+E K+F EM ++ + ++ I GY GRP A E+F M + +
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 204 LSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
L GL + I Y+ + +D++ V ++ ++ K G +++A +F +
Sbjct: 404 LLDGLCCNGKV---EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 264 DK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTF 305
K +V+++TTMI G E SLF+ + G PNE +
Sbjct: 461 SKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 134/301 (44%), Gaps = 19/301 (6%)
Query: 252 LDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTG 307
++A +F +MV ++ +T ++ + R + SLF + G+ P T
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 308 VLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP--- 364
V+ + G MM++G++P ++L++ Y + A +F+QI
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 365 -RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGL 423
+P++V++T+LI +N + A+ F + +G++P+ +T+ +++ G
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 424 EYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAE---NIIDNMSIKPDKFLWASLLGG 480
+ ++ + + +ID + G+ EA+ N++ MS+ PD F + SL+ G
Sbjct: 244 WLLRDMMKRR-IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 481 CRIHGNIELAKRAANALFEIEPE----NPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
++G L A + +E N Y TL + + + + + K+ +M +G+
Sbjct: 303 LCMYG---LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 537 V 537
V
Sbjct: 360 V 360
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/494 (19%), Positives = 209/494 (42%), Gaps = 32/494 (6%)
Query: 65 RPSPRL--YSTLIAACVRHRALEQGRRVHALTKSSNFIPGIFISNRLLDLYAKCGSLADA 122
RP P L +S +A R + + + I+ N +++ + +C A
Sbjct: 83 RPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFA 142
Query: 123 QRLFDEMG----DRDLCSWNTMIAGYAKLGWLEQARKLFDEMPRR----DHFSWNAAISG 174
+ ++ + D ++NT+I G G + +A L D M D ++N+ ++G
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 175 YVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL 234
G AL++ R M++ + ++ FT S+ + + C+ + + G+
Sbjct: 203 ICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 235 DEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV----SWTTMIHRCFEDGRREEGFSLF 290
V +++L+ K G ++ + MV +++V ++ ++ ++G+ +E L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 291 RDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKC 350
++++ G+ PN T+ ++ + M+R P ++L+ Y
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 351 GNTKIASRVFNQIPRPDLV----SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITF 406
+VF I + LV +++ L+ GF Q+G+ A F+ ++ G PD +T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 407 VGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM- 465
+L G ++K LE F + +K + Y +I+ + + G+ +A N+ ++
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 466 --SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE-----NPATYITLANIYANA 518
+KP+ + ++ G G++ AN L E N TY TL +
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLS----EANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 519 GQWAEEAKVRKDME 532
G AK+ ++M+
Sbjct: 557 GDLTASAKLIEEMK 570
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 122/269 (45%), Gaps = 17/269 (6%)
Query: 280 DGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFA 339
D ++++ +LF++++ S P+ F+ A A +L + + G +
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 340 GSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLL 395
+ +++ + +C T A V ++ + PD ++ +LI G G+ A+ + ++
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 396 KSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRF 455
++G +PD +T+ +++ +G L+ ++E++ + Y+ +ID L R G
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN-VKADVFTYSTIIDSLCRDGCI 244
Query: 456 NEAENIIDNMS---IKPDKFLWASLLGG-CRI----HGNIELAKRAANALFEIEPENPAT 507
+ A ++ M IK + SL+ G C+ G + L + EI P N T
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR---EIVP-NVIT 300
Query: 508 YITLANIYANAGQWAEEAKVRKDMEIRGI 536
+ L +++ G+ E ++ K+M RGI
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGI 329
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 126/588 (21%), Positives = 250/588 (42%), Gaps = 92/588 (15%)
Query: 34 AKTNNNFEEAI-NALCQQKRLKEAVDLLHHV--DRPSPRL--YSTLIAACVRHRALEQ-- 86
A + ++ E + N L ++ +AVDL + RP P + ++ L++A + E
Sbjct: 44 ASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVI 103
Query: 87 --GRRVHALTKSSN-FIPGIFISN--RLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMI 141
G ++ L S + + IFI+ R L LA +L E D+ + ++++
Sbjct: 104 SLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE---PDIVTLSSLL 160
Query: 142 AGYAKLGWLEQARKLFDEMP----RRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESS 197
GY + A L D+M + D F++ I G H + EA+ + M
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM------ 214
Query: 198 NSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARG 257
V+ G D V + +++ K G +D A
Sbjct: 215 ------------------------------VQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 258 IFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACA 313
+ +M ++ DVV + T+I + ++ +LF ++ G+RP+ +T++ ++
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 314 DHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLV 369
++ + M+ +P SAL+D + K G A ++++++ + PD+
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 370 SWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSI 429
+++SLI GF + + D A H FEL++ P+ +T+ ++ A V++G+E F +
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 430 KEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGG-CRIHG 485
++ GL+ Y +I ++ + A+ + M + P+ + LL G C+
Sbjct: 425 SQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK--- 480
Query: 486 NIELAKRAANALFE------IEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKK 539
N +LAK A +FE +EP+ TY + AG+ + ++ ++ ++G+
Sbjct: 481 NGKLAK--AMVVFEYLQRSTMEPD-IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV--- 534
Query: 540 PGKSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT 587
+ I + F + E L KKMKE+G +P++
Sbjct: 535 -SPNVIAYNTMISGFCRKGS--------KEEADSLLKKMKEDGPLPNS 573
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 173/376 (46%), Gaps = 26/376 (6%)
Query: 40 FEEAINALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTK 95
+ I+ LC+ K + +A++L +D RP YS+LI+ + R+ +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 96 SSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLE 151
P + + L+D + K G L +A++L+DEM R D+ +++++I G+ L+
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 152 QARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFR-MMQKHESSNSNKF-TLS 205
+A+ +F+ M +D F +++ I G+ R E +E+FR M Q+ N+ + TL
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 206 SGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM--- 262
G A ++ + +V G+ + + ++ LLD K G L +A +F+ +
Sbjct: 441 HGFFQARDCDNAQM---VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 263 -VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLG 321
++ D+ ++ MI + G+ E+G+ LF +L GV PN + ++ ++
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 322 KEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLIG---GF 378
+ M G P S + L+ + G+ + ++ + ++ S IG
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617
Query: 379 AQNGQPDRALHFFELL 394
+G+ D++ F ++L
Sbjct: 618 LHDGRLDKS--FLDML 631
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 183/437 (41%), Gaps = 66/437 (15%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+N +C+ K A++LL ++ +P +YS +I + + + +
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARK 155
P +F N ++D + G +DAQRL +M +R D+ ++N +I+ K G L +A K
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 156 LFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
L DEM R D ++N+ I G+ H R +A MF +M
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------------------- 427
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV--- 268
A P D V ++ ++D+Y + +DE + ++ + +V
Sbjct: 428 -ASP-------------------DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 269 -SWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
++ T+IH E LF++++ GV P+ T +L ++ E+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKI--ASRVFNQIP----RPDLVSWTSLIGGFAQN 381
+ D + A + ++ + C +K+ A +F +P PD+ ++ +I GF
Sbjct: 528 IQMSKIDLDTVAYNIII--HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 382 GQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADH 441
A F + +G +PD T+ ++ C AG +DK +E ++ +G A
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR-SNGFSGDAFT 644
Query: 442 YACVIDLLARSGRFNEA 458
V DL+ GR +++
Sbjct: 645 IKMVADLIT-DGRLDKS 660
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 194/443 (43%), Gaps = 53/443 (11%)
Query: 39 NFEEAINALCQQKRLKEAVDLLH-------HVDRPSPRLYSTLIAACVRHRALEQGRRVH 91
F IN LC + R+ EA L++ H+D + Y T++ + + +
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT---YGTIVNGMCKMGDTKSALNLL 284
Query: 92 ALTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLE 151
+ + ++ P + I + ++D K G +DAQ LF EM ++ +
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP--------------- 329
Query: 152 QARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
+ F++N I G+ S GR +A + R M + E N + T ++ ++A+
Sbjct: 330 ------------NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-NPDVLTFNALISAS 376
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWT 271
L +++ ++ + D V +++++ + K D+A+ +FD M DVV++
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFN 436
Query: 272 TMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRV 331
T+I R +EG L R++ G+ N T+ ++ + + +++ M+
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 332 GYDPGSFAGSALVDLYSKCGNTKI--ASRVFN--QIPRPDL--VSWTSLIGGFAQNGQPD 385
G P + + L LY C N K+ A +F Q+ + DL V++ +I G + + D
Sbjct: 497 GVCPDTITCNIL--LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 386 RALHFFELLLKSGTKPDQITFVGVLSA-CTHAGLVDKGLEYFHSIKEKHGLMHTADH--Y 442
A F L G +PD T+ ++S C + + D + FH +K+ H D+ Y
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV-LFHKMKDNG---HEPDNSTY 610
Query: 443 ACVIDLLARSGRFNEAENIIDNM 465
+I ++G +++ +I M
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEM 633
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/481 (20%), Positives = 181/481 (37%), Gaps = 81/481 (16%)
Query: 150 LEQARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
L+ A FD M R F N I +V RP A+ ++R M+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR----------- 135
Query: 206 SGLAAAAAIPCLRLGKEIHGY--LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
R+ I+ + L++ D ++ +S L +GK L
Sbjct: 136 ------------RIPLNIYSFNILIKCFCDCHKLSFS--LSTFGKLTKLG---------F 172
Query: 264 DKDVVSWTTMIH-RCFEDGRRE--------------EGFSLFRDLMGSGVRPNEYTFTGV 308
DVV++ T++H C ED E E +LF ++ G+ P TF +
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP---- 364
+ + M+ G +V+ K G+TK A + +++
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
+PD+V ++++I ++G A + F +L+ G P+ T+ ++ G
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGC 481
+ E+ + + +I + G+ EAE + D M I PD + S++ G
Sbjct: 353 LLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 482 RIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPG 541
H + AK + + + T+ T+ ++Y A + E ++ +++ RG+V
Sbjct: 412 CKHNRFDDAKHMFDLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV---- 464
Query: 542 KSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT---NFVLHDVEEEQ 598
+ +H F D + +L ++M G PDT N +L+ E +
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAA--------QDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 599 K 599
K
Sbjct: 517 K 517
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 34/316 (10%)
Query: 251 SLDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
SLD+A FD MV V +I R + SL+R + + N Y+F
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKI----------- 355
++K D G + ++G+ P + L L+ C +I
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL--LHGLCLEDRISEALALFGYMV 203
Query: 356 ------ASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
A +F+Q+ P ++++ +LI G G+ A ++ G D +T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
+ +++ G L ++E H + Y+ +ID L + G ++A+ + M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 466 ---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENP--ATYITLANIYANAGQ 520
I P+ F + ++ G G A+R + E E NP T+ L + G+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-NPDVLTFNALISASVKEGK 381
Query: 521 WAEEAKVRKDMEIRGI 536
E K+ +M R I
Sbjct: 382 LFEAEKLCDEMLHRCI 397
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 205/452 (45%), Gaps = 31/452 (6%)
Query: 39 NFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRR-VHAL 93
++ INA + R + +++LL + PS Y+T+I AC R +G + A
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 94 TKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGD----RDLCSWNTMIAGYAKLGW 149
+ P I N LL A G +A+ +F M D DL +++ ++ + KL
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 150 LEQARKLFDEMPR----RDHFSWNAAISGYVSHGRPREALEMFRMMQKHE-SSNSNKFTL 204
LE+ L EM D S+N + Y G +EA+ +F MQ + N+N +++
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 205 SSGLAAAAAIPCLRLG--KEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQM 262
L + R +++ + + D D ++ L++++G+ G E +F M
Sbjct: 358 LLNLFGQSG----RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 263 VDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAE 318
V++ D+ ++ +I C + G E+ + + + + + P+ +TGV++A A
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 319 HLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTK----IASRVFNQ-IPRPDLVSWTS 373
M VG +P +L+ +++ G K I SR+ + IPR + ++ +
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPR-NRDTFNA 532
Query: 374 LIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKH 433
I + Q G+ + A+ + + KS PD+ T VLS + A LVD+ E F +K
Sbjct: 533 QIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASD 592
Query: 434 GLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
++ + Y ++ + ++ R+++ +++ M
Sbjct: 593 -ILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 190/454 (41%), Gaps = 48/454 (10%)
Query: 113 YAKCGSLADAQRLFDEMGDRDLCS-----WNTMIAGYAKLGWLEQARKLFDEMPR----R 163
+A G + RLF M + C + MI+ + G L++ ++FDEMP R
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 164 DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEI 223
FS+ A I+ Y +GR +LE+ M K+E + + T ++ + A C R G +
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRM-KNEKISPSILTYNTVINA-----CARGGLDW 228
Query: 224 HGYL------VRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVD----KDVVSWTTM 273
G L G+ D V ++ LL G DEA +F M D D+ +++ +
Sbjct: 229 EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 274 IHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGY 333
+ + R E+ L ++ G P+ ++ +L+A A + V M G
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 334 DPGSFAGSALVDLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALH 389
P + S L++L+ + G ++F ++ PD ++ LI F + G +
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 390 FFELLLKSGTKPDQITFVGVLSACTHAGL---VDKGLEYFHSIKEKHGLMHTADHYACVI 446
F +++ +PD T+ G++ AC GL K L+Y + + ++ ++ Y VI
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA----NDIVPSSKAYTGVI 464
Query: 447 DLLARSGRFNEAE---NIIDNMSIKPDKFLWASLL-----GGCRIHGNIELAKRAANALF 498
+ ++ + EA N + + P + SLL GG L++ + +
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI- 523
Query: 499 EIEPENPATYITLANIYANAGQWAEEAKVRKDME 532
P N T+ Y G++ E K DME
Sbjct: 524 ---PRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 122/322 (37%), Gaps = 30/322 (9%)
Query: 305 FTGVLKACADHAAEHLGKEVHGYMMR-VGYDPGSFAGSALVDLYSKCGNTKIASRVFNQI 363
F V K A + YM R + P + ++ L + G VF+++
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 364 PRP----DLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLV 419
P + S+T+LI + +NG+ + +L + + P +T+ V++AC GL
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 420 DKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNMS---IKPDKFLWAS 476
+GL + G+ Y ++ A G +EAE + M+ I PD ++
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 477 LLGGCRIHGNIELAKRAANALFEIEPENPATYITLANI----YANAGQWAEEAKVRKDME 532
L+ G + ++ + L E+ IT N+ YA +G E V M+
Sbjct: 288 LV---ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 533 IRGIVKKPGKSWIEIK-----------RQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEE 581
G + + RQ+ + + + P + L E+ E
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA-TYNILIEV---FGEG 400
Query: 582 GYVPDTNFVLHDVEEEQKEQNL 603
GY + + HD+ EE E ++
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDM 422
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 197/458 (43%), Gaps = 68/458 (14%)
Query: 136 SWNTMIAGYAKLGWLEQARKLFDEMPR----RDHFSWNAAISGYVSHGRPREA---LEMF 188
S+N++++ KLG ++ A + MPR D S+N+ I G+ +G R A LE
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 189 R----MMQKHESSNSNKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDL-----DEVVW 239
R + K + + N +L +G + +++ E+ Y+ G+ L + V +
Sbjct: 118 RASHGFICKPDIVSFN--SLFNGFSK------MKMLDEVFVYM---GVMLKCCSPNVVTY 166
Query: 240 SALLDLYGKCGSLDEARGIFDQM----VDKDVVSWTTMIHRCFEDGRREEGFSLFRDLMG 295
S +D + K G L A F M + +VV++T +I + G E SL++++
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 296 SGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNT-- 353
+ N T+T ++ +E++ M+ +P S + ++D + + G++
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 354 --KIASRVFNQIPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLS 411
K +++ NQ R D+ ++ +I G NG+ A E + KS PD + F +++
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 412 ACTHAGLVDKGLEYFHSIKE------------------KHGLMHTADHYACV-------- 445
A +G + + +H + E K+G +H A Y C+
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMY 406
Query: 446 ---IDLLARSGRFNEAENIIDNMS---IKPDKFLWASLLGGCRIHGN-IELAKRAANALF 498
ID L + G F E E + +S + PDKF++ S + G GN ++ K +
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 499 EIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGI 536
E + Y TL A+ G E +V +M GI
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 219/509 (43%), Gaps = 37/509 (7%)
Query: 38 NNFEEAINALCQQKRLKEAVDLLHHVDR----PSPRLYSTLIAACVRHRALEQGRRV-HA 92
++F ++ +C+ ++K A D++H + R P Y++LI R+ + V +
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 93 LTKSSNFI--PGIFISNRLLDLYAKCGSLADAQRLFDEMG------DRDLCSWNTMIAGY 144
L S FI P I N L + ++K L +F MG ++ +++T I +
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKML---DEVFVYMGVMLKCCSPNVVTYSTWIDTF 173
Query: 145 AKLGWLEQARKLFDEMPRRDHFSWNAA-----ISGYVSHGRPREALEMFRMMQKHESSNS 199
K G L+ A K F M +RD S N I GY G A+ +++ M++ S
Sbjct: 174 CKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMS-L 231
Query: 200 NKFTLSSGLAAAAAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIF 259
N T ++ + ++ +E++ +V ++ + +V++ ++D + + G D A
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 260 DQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADH 315
+M+++ D+ ++ +I +G+ +E + D+ S + P+ FT ++ A
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 316 AAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIPRPDLVSWTSLI 375
++ ++ G++P A S ++D +K G A V+ I + + V +T LI
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFCIEKANDVMYTVLI 410
Query: 376 GGFAQNGQPDRALHFFELLLKSGTKPDQITFVG-VLSACTHAGLVDKGLEYFHSIKEKHG 434
+ G F + ++G PD+ + + C LVD ++E G
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE--G 468
Query: 435 LMHTADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAK 491
L+ Y +I LA G EA + D M I PD ++ L+ GN+
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNM---A 525
Query: 492 RAANALFEIEPENPATYITLANIYANAGQ 520
A++ L +++ T ++ A+ G
Sbjct: 526 AASDLLLDMQRRGLVTAVSDADCSKQCGN 554
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 15/256 (5%)
Query: 293 LMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGN 352
L+ G P+ +F V+ +++ M R G +P + ++L+D + + G+
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 353 TKIASRVFNQ-------IPRPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
+ AS V I +PD+VS+ SL GF++ D + ++LK + P+ +T
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS-PNVVT 165
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
+ + +G + L+ FHS+K + L + C+ID ++G A ++ M
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMK-RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 466 ---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFE--IEPENPATYITLANIYANAGQ 520
+ + + +L+ G G ++ A+ + + E +EP N Y T+ + + G
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP-NSLVYTTIIDGFFQRGD 283
Query: 521 WAEEAKVRKDMEIRGI 536
K M +G+
Sbjct: 284 SDNAMKFLAKMLNQGM 299
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 25/262 (9%)
Query: 285 EGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALV 344
E L S P+ +T + + L + Y++ GY P + +++V
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 345 DLYSKCGNTKIASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSG-- 398
K G K A + + +PR PD++S+ SLI G +NG A E L S
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 399 -TKPDQITFVGVLSACTHAGLVDKGLEYFHSIKEKHGLM-----HTADHYACVIDLLARS 452
KPD ++F + + + ++D+ Y G+M Y+ ID +S
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYM-------GVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 453 GRFNEAENIIDNM---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPE-NPATY 508
G A +M ++ P+ + L+ G G++E+A + + N TY
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 509 ITLANIYANAG--QWAEEAKVR 528
L + + G Q AEE R
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSR 258
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 167/407 (41%), Gaps = 60/407 (14%)
Query: 44 INALCQQKRLKEAVDLLHHVD----RPSPRLYSTLIAACVRHRALEQGRRVHALTKSSNF 99
+N +C+ K A++LL ++ +P +YS +I + + + +
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 100 IPGIFISNRLLDLYAKCGSLADAQRLFDEMGDR----DLCSWNTMIAGYAKLGWLEQARK 155
P +F N ++D + G +DAQRL +M +R D+ ++N +I+ K G L +A K
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 156 LFDEMPRR----DHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAA 211
L DEM R D ++N+ I G+ H R +A MF +M
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------------------- 427
Query: 212 AAIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVV--- 268
A P D V ++ ++D+Y + +DE + ++ + +V
Sbjct: 428 -ASP-------------------DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 269 -SWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGY 327
++ T+IH E LF++++ GV P+ T +L ++ E+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 328 MMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP----RPDLVSWTSLIGGFAQNGQ 383
+ D + A + ++ K A +F +P PD+ ++ +I GF
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 384 PDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLEYFHSIK 430
A F + +G +PD T+ ++ C AG +DK +E ++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 194/442 (43%), Gaps = 53/442 (11%)
Query: 40 FEEAINALCQQKRLKEAVDLLH-------HVDRPSPRLYSTLIAACVRHRALEQGRRVHA 92
F IN LC + R+ EA L++ H+D + Y T++ + + + +
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT---YGTIVNGMCKMGDTKSALNLLS 285
Query: 93 LTKSSNFIPGIFISNRLLDLYAKCGSLADAQRLFDEMGDRDLCSWNTMIAGYAKLGWLEQ 152
+ ++ P + I + ++D K G +DAQ LF EM ++ +
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP---------------- 329
Query: 153 ARKLFDEMPRRDHFSWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLSSGLAAAA 212
+ F++N I G+ S GR +A + R M + E N + T ++ ++A+
Sbjct: 330 -----------NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-NPDVLTFNALISASV 377
Query: 213 AIPCLRLGKEIHGYLVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMVDKDVVSWTT 272
L +++ ++ + D V +++++ + K D+A+ +FD M DVV++ T
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437
Query: 273 MIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFTGVLKACADHAAEHLGKEVHGYMMRVG 332
+I R +EG L R++ G+ N T+ ++ + + +++ M+ G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 333 YDPGSFAGSALVDLYSKCGNTKI--ASRVFN--QIPRPDL--VSWTSLIGGFAQNGQPDR 386
P + + L LY C N K+ A +F Q+ + DL V++ +I G + + D
Sbjct: 498 VCPDTITCNIL--LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 387 ALHFFELLLKSGTKPDQITFVGVLSA-CTHAGLVDKGLEYFHSIKEKHGLMHTADH--YA 443
A F L G +PD T+ ++S C + + D + FH +K+ H D+ Y
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV-LFHKMKDNG---HEPDNSTYN 611
Query: 444 CVIDLLARSGRFNEAENIIDNM 465
+I ++G +++ +I M
Sbjct: 612 TLIRGCLKAGEIDKSIELISEM 633
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/481 (20%), Positives = 180/481 (37%), Gaps = 81/481 (16%)
Query: 150 LEQARKLFDEMPRRDHF----SWNAAISGYVSHGRPREALEMFRMMQKHESSNSNKFTLS 205
L+ A FD M R F N I +V RP A+ ++R M+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR----------- 135
Query: 206 SGLAAAAAIPCLRLGKEIHGY--LVRAGLDLDEVVWSALLDLYGKCGSLDEARGIFDQMV 263
R+ I+ + L++ D ++ +S L +GK L
Sbjct: 136 ------------RIPLNIYSFNILIKCFCDCHKLSFS--LSTFGKLTKLG---------F 172
Query: 264 DKDVVSWTTMIH-RCFEDGRRE--------------EGFSLFRDLMGSGVRPNEYTFTGV 308
DVV++ T++H C ED E E +LF ++ G+ P TF +
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 309 LKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKIASRVFNQIP---- 364
+ + M+ G +V+ K G+TK A + +++
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 365 RPDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQITFVGVLSACTHAGLVDKGLE 424
+PD+V ++++I ++G A + F +L+ G P+ T+ ++ G
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 425 YFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM---SIKPDKFLWASLLGGC 481
+ E+ + + +I + G+ EAE + D M I PD + S++ G
Sbjct: 353 LLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 482 RIHGNIELAKRAANALFEIEPENPATYITLANIYANAGQWAEEAKVRKDMEIRGIVKKPG 541
H + AK + + + T+ T+ ++Y A + E ++ +++ RG+V
Sbjct: 412 CKHNRFDDAKHMFDLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 542 KSWIEIKRQVHVFLVGDTSHPKIRDIHEFLGELSKKMKEEGYVPDT---NFVLHDVEEEQ 598
+H F D + +L ++M G PDT N +L+ E +
Sbjct: 469 T----YNTLIHGFCEVDNLNAA--------QDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 599 K 599
K
Sbjct: 517 K 517
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 121/316 (38%), Gaps = 34/316 (10%)
Query: 251 SLDEARGIFDQMVDK----DVVSWTTMIHRCFEDGRREEGFSLFRDLMGSGVRPNEYTFT 306
SLD+A FD MV V +I R + SL+R + + N Y+F
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 307 GVLKACADHAAEHLGKEVHGYMMRVGYDPGSFAGSALVDLYSKCGNTKI----------- 355
++K D G + ++G+ P + L L+ C +I
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL--LHGLCLEDRISEALALFGYMV 203
Query: 356 ------ASRVFNQIPR----PDLVSWTSLIGGFAQNGQPDRALHFFELLLKSGTKPDQIT 405
A +F+Q+ P ++++ +LI G G+ A ++ G D +T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 406 FVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFNEAENIIDNM 465
+ +++ G L ++E H + Y+ +ID L + G ++A+ + M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 466 ---SIKPDKFLWASLLGGCRIHGNIELAKRAANALFEIEPENP--ATYITLANIYANAGQ 520
I P+ F + ++ G G A+R + E E NP T+ L + G+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-NPDVLTFNALISASVKEGK 381
Query: 521 WAEEAKVRKDMEIRGI 536
E K+ +M R I
Sbjct: 382 LFEAEKLCDEMLHRCI 397