Miyakogusa Predicted Gene

Lj2g3v2103060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2103060.1 Non Chatacterized Hit- tr|K0TBL7|K0TBL7_THAOC
Uncharacterized protein OS=Thalassiosira oceanica
PE=4,27.02,9e-17,ABHYDROLASE DOMAIN-CONTAINING PROTEIN
11-RELATED,NULL; ALPHA/BETA HYDROLASE FOLD-CONTAINING
PROTEIN,,CUFF.38567.1
         (389 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G10030.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   507   e-144
AT3G52570.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   161   6e-40

>AT4G10030.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr4:6270490-6273098 REVERSE LENGTH=380
          Length = 380

 Score =  507 bits (1306), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/344 (72%), Positives = 276/344 (80%)

Query: 46  TQNDRFNVPRLARSYTSRAVKDRTVSMALVSDTLGQKGDVASSSSVLAYELVQGALVRWS 105
           +Q+DRF   RL   + +R VK  +V MALV +      DVA    VLAY+LVQGALV+W 
Sbjct: 37  SQSDRFCNHRLELVHGTRKVKGASVRMALVEERQSTSKDVAEPPRVLAYDLVQGALVKWR 96

Query: 106 SVMDKSLPDPPTAVFLHGILGCRKNWGTFVKRLAKEFPMWQFLVVDLRCHGDSASMRKRG 165
              DKS+PD PTAV LHGILG  KNWGTF +RLA EFP WQFL+VDLRCHGDS S++KRG
Sbjct: 97  WKDDKSVPDTPTAVLLHGILGSGKNWGTFARRLAHEFPTWQFLLVDLRCHGDSTSLKKRG 156

Query: 166 PHSVQSAALDVLKLVRELRITPRLLVGHSFGGKVVLSMVDQAAKPLARPVRAWILDATPG 225
           PHSV + A DVLKLV +LR+TPR+LVGHSFGGKVVLSMV+QAAKPL RPVRAW+LDATPG
Sbjct: 157 PHSVATTASDVLKLVGQLRLTPRVLVGHSFGGKVVLSMVEQAAKPLPRPVRAWVLDATPG 216

Query: 226 KVRAGGDGEDHPAELISFLSTLPKEVSSKRDVVKALIQQGFSNDVAQWVVTNLRPTGSPG 285
           KVRAGGDGEDHP ELISFL  LPK V SKR+V+KALI +GFSNDVAQWV+TNLRPTG   
Sbjct: 217 KVRAGGDGEDHPRELISFLRKLPKVVLSKREVLKALINEGFSNDVAQWVITNLRPTGPSA 276

Query: 286 SGFSWVFDLRGIAEMYQSYEEANLWKIVEDVPRGVHVNFLKAERSLHRWALEDLQRIHXX 345
           S FSW FDL GIAE+YQSYEE NLW  VE++PRGVHVNFLKAERSLHRWALEDLQRIH  
Sbjct: 277 SSFSWTFDLDGIAELYQSYEETNLWNFVENLPRGVHVNFLKAERSLHRWALEDLQRIHAA 336

Query: 346 XXXXXXXXXXVEMHVLEDAGHWVHADNPDGLFRILSSSFQGVKA 389
                     VEMHVLEDAGHWVH DNPDGLFRILSSSFQ ++A
Sbjct: 337 EELASEEGGGVEMHVLEDAGHWVHTDNPDGLFRILSSSFQVLRA 380


>AT3G52570.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:19501145-19502795 FORWARD LENGTH=335
          Length = 335

 Score =  161 bits (408), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 170/311 (54%), Gaps = 29/311 (9%)

Query: 88  SSSVLAYELVQGALVRWSSVMDKSLPDPPTAVFLHGILGCRKNWGTFVKRLAKEFPM--- 144
           S   LAYE V+ +  R S           TA+ LHG+LG  +NW +F + LA    +   
Sbjct: 35  SLQTLAYEEVRTSGDRESE---------STALILHGLLGSGRNWRSFSRSLASSLSVSSA 85

Query: 145 --WQFLVVDLRCHGDSASMRKRGP-HSVQSAALDVLKLVRELRIT-PRLLVGHSFGGKVV 200
             W+ ++VDLR HG SA +    P H + ++A D+  LV+      P +++GHS GGKV 
Sbjct: 86  SDWKMILVDLRNHGRSAEVEGLNPPHDLVNSAKDLADLVKASGWNWPDVVIGHSLGGKVA 145

Query: 201 LSMVDQAAK-----PLARPVRAWILDATPGKVRA-GGDGEDHPAELISFLSTLPKEVSSK 254
           L  ++  A+       + P + W+LD+ PG+V+A   DGE    +++  L +LP  + S+
Sbjct: 146 LQFMESCARGDFGESASPPKQLWVLDSVPGEVKAEKSDGE--VEKVLKTLQSLPSSIPSR 203

Query: 255 RDVVKALIQQGFSNDVAQWVVTNLRPTGSPGSGFSWVFDLRGIAEMYQSYEEANLWKIVE 314
           + +V  +++ GFS  +++W+ +NL+ +G   +   W F+L G  +M+ SY E + W ++E
Sbjct: 204 KWLVDRMVELGFSRSLSEWIGSNLKRSGDSET---WTFNLDGAVQMFNSYRETSYWSLLE 260

Query: 315 DVPRGVHVNFLKAERSLHRWALEDLQRIHXXXXXXXXXXX-XVEMHVLEDAGHWVHADNP 373
           + P+   +NF+ AE+S  RW  +  +R+              V  H+L ++GHWVH DNP
Sbjct: 261 NPPKETEINFVIAEKS-DRWDNDTTKRLETIANQRQNVAEGKVATHLLRNSGHWVHTDNP 319

Query: 374 DGLFRILSSSF 384
            GL  I+S +F
Sbjct: 320 KGLLEIVSPNF 330