Miyakogusa Predicted Gene
- Lj2g3v2102980.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2102980.2 Non Chatacterized Hit- tr|I1L6P3|I1L6P3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,30.19,3e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.38691.2
(346 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 2e-80
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 6e-80
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 292 3e-79
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 1e-78
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 8e-78
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 9e-78
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 1e-77
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 286 2e-77
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 6e-77
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 284 6e-77
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 2e-76
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 2e-74
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 4e-71
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 2e-70
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 4e-69
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 9e-68
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 3e-66
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 1e-65
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 1e-65
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 244 5e-65
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 3e-64
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 3e-64
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 2e-62
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 235 3e-62
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 8e-62
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 3e-61
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 5e-61
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 1e-60
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 2e-60
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 8e-60
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 9e-60
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 7e-59
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 4e-57
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 4e-56
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 5e-56
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 7e-56
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 4e-55
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 209 3e-54
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 6e-54
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 6e-53
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 6e-53
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 6e-53
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 7e-53
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 8e-53
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 1e-52
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 5e-52
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 6e-52
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 8e-52
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 8e-52
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 2e-51
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 4e-51
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 9e-50
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 193 1e-49
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 2e-49
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 6e-49
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 190 2e-48
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 3e-48
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 4e-48
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 4e-48
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 188 6e-48
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 2e-47
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 3e-47
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 7e-47
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 7e-47
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 3e-46
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 5e-46
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 7e-46
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 1e-45
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 2e-44
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 8e-44
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 2e-43
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 3e-43
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 3e-43
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 8e-43
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 171 8e-43
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 169 2e-42
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 169 2e-42
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 3e-42
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 8e-42
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 5e-41
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 162 3e-40
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 6e-40
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 161 6e-40
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 159 3e-39
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 159 3e-39
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 1e-37
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 7e-37
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 9e-37
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 4e-36
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 5e-36
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 8e-36
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 146 2e-35
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 7e-35
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 4e-34
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 9e-34
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 9e-34
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 137 8e-33
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 137 8e-33
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 9e-33
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 2e-32
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 4e-32
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 133 2e-31
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 6e-31
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 6e-31
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 6e-31
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 9e-30
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 8e-28
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 120 1e-27
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 120 2e-27
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 120 2e-27
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 119 3e-27
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 118 5e-27
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 7e-27
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 8e-27
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 117 1e-26
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 1e-26
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 2e-26
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 114 9e-26
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 112 5e-25
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 6e-25
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 110 1e-24
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 110 2e-24
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 4e-24
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 106 3e-23
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 3e-23
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 5e-23
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 103 2e-22
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 102 3e-22
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 6e-22
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 7e-22
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 9e-22
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 100 1e-21
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 94 1e-19
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 94 2e-19
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 93 2e-19
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 92 4e-19
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 92 5e-19
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 92 6e-19
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 8e-19
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 91 8e-19
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 91 1e-18
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 91 2e-18
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 90 2e-18
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 90 3e-18
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 90 3e-18
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 89 4e-18
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 89 7e-18
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 88 7e-18
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 7e-18
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 7e-18
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 87 1e-17
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 87 2e-17
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 84 1e-16
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 82 4e-16
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 82 5e-16
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 5e-16
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 82 7e-16
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 9e-16
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 81 9e-16
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 79 5e-15
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 79 5e-15
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 8e-15
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 77 2e-14
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 77 3e-14
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 75 8e-14
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 75 8e-14
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 74 2e-13
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 74 2e-13
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 73 3e-13
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 70 2e-12
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 68 7e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 68 9e-12
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 67 1e-11
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 57 2e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 1e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 1e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 1e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 48 8e-06
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 214/339 (63%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS IID LCKD +++A+NL++EM K D++ YTTLI GFC G+ + LL M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I PDV FS L+D KEGK++EA+ + MI+ G PD VTY+SL+DG+C N+++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + + M P++++++I+ING CK ++DD L LF++M + D VTY++LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+ G++ A EL EM SR + P++++Y LLD LC N + A+ + +K++ +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D+ Y I++ G+C ++ DA ++F L +KG DV+TY IMI GLCK G EA L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
KME++G +P+ TY I+I A EGD K+ KL+ ++
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 196/341 (57%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S +I+ C+ + ++ A++ +++ PD VT++TLI+G C+ G++ EA+ L+++MV
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
P + T + LV+ LC GKV +A ++ M++ G +P+ VTY ++ C +
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++ M ++ D YSI+I+GLCK +D+A NLF +M + D++ Y++LI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G C +GR D +L+ +M R + P+V+ +S+L+D K + A L K+M +GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D TYT L+DG CK +L A + ++ KG ++RT+ I+ING CK L D+ L L
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
KM G D VTY +I + G + A++L ++M++R
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 186/339 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ST+I+ LC + V++A L M+ P ++T L++G C+ G++ +AV L+++MV
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+ T+ ++ +CK G+ A +L M + K D V YS ++DG C ++
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++FN M D+ Y+ +I G C DD L + M ITPDVV +S+LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K G++ +A EL EM RG+ P+ +TY+SL+D CK + +D A ++ M +G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ T+ IL++G CK + D E+F+ + ++G D TY +I G C+ G + A L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M PD V+Y+I++ L G+ +KA ++ ++
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 192/343 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +++ LC + V+DA L M+ P+ VTY ++ C GQ A+ LL +M
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ I D +SI++D LCK+G + A N+ M G K D++ Y++L+ G+C +
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+ M + ++ PDV ++S +I+ K + +A L K+M I+PD VTY+SLID
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G CK ++ A +++ M S+G PN+ T++ L++ CK + +D+ + L +KM +G++
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D TY L+ G C+ G+L+ A+E+FQ+++ + D+ +Y I+++GLC +G ++AL +
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
K+E + D Y III+ + D A L + +G+
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 182/329 (55%)
Query: 16 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSIL 75
+DA +L+ EM R P ++ ++ L S Q + L QM +K I ++YT SI+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
++ C+ K+ A + + +IK G +PD VT+S+L++G CL V++A ++ + M M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
P + + + ++NGLC V DA+ L +M P+ VTY ++ +CKSG+ + A E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
L+ +M R + + + YS ++D LCK+ +DNA +L +M+ +G D+ YT L+ G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
GR D ++ +D++ + DV ++ +I+ K+G EA L +M G +PD V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARG 344
TY +I +E DKA +L M+++G
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 188/345 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S + + + K + +L +M K I+ ++ T + +I+ C +L A + +++
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD TFS L++ LC EG+V EA ++ M++ G KP ++T ++L++G CL +V+
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + + M P+ +Y ++ +CK A+ L ++M I D V YS +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLCK G + +A+ L NEM +G ++I Y++L+ C D+ L++ M + I
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV ++ L+D K G+L++A+E+ ++++ +G + D TYT +I+G CK+ D+A +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ M GC P+ T+ I+I + D +L R+M RG++
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 169/302 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S +ID K+ + +A L+ EM+ + ISPD VTYT+LI GFC QL +A +L+ MV
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P++ TF+IL++ CK + + + M G D VTY++L+ G+C + ++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+++F M + PD+ SY I+++GLC + AL +F+++ + D+ Y+ +I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G+C + ++ DAW+L + +G+ P+V TY+ ++ LCK + A L +KM+ G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ TY IL+ G + ++ +++ G+++D T ++++ L L L +
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDM 619
Query: 302 MS 303
+S
Sbjct: 620 LS 621
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 136/260 (52%)
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
K +A ++ M + +P ++ +S L + + D+ M +A ++ + S
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
IMIN C+ + + A + ++ PD VT+S+LI+GLC GR+S+A ELV+ M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
G P +IT ++L++ LC N V +A+ LI +M G P+ TY +L +CK G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
E+ + + + LD Y+I+I+GLCKDG D A L ++ME G D + Y +I
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 324 LFQEGDNDKAEKLLRQMIAR 343
G D KLLR MI R
Sbjct: 292 FCYAGRWDDGAKLLRDMIKR 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ II +C V+DA++L+ + K + PDV TY +I G C G L EA L +M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 112
+P+ T++IL+ A EG ++ ++ + + G D T ++D
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 294 bits (752), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 215/339 (63%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS IID LCK +++A+NL++EM K I+ +++TY LI GFC G+ + LL M+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ INP+V TFS+L+D+ KEGK++EA+ + MI G PD +TY+SL+DG+C N ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + + M P++++++I+ING CK +DD L LF++M + D VTY++LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+ G+++ A EL EM SR +PPN++TY LLD LC N + A+ + +K++ +
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D+ Y I++ G+C ++ DA ++F L +KG V+TY IMI GLCK G EA L
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
KME++G PD TY I+I A +GD K+ KL+ ++
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 199/341 (58%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S +I+ C+ + + A++ +++ P+ +T++TLI+G C+ G++ EA+ L+++MV
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
PD+ T + LV+ LC GK EA ++ M++ G +P+ VTY +++ C +
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++ M + D YSI+I+GLCK +D+A NLF +M + IT +++TY+ LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G C +GR D +L+ +M R + PNV+T+S L+D+ K + A L K+M H+GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D TYT L+DG CK L A ++ ++ KG + ++RT+ I+ING CK D+ L L
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
KM G D VTY +I + G + A++L ++M++R
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 193/339 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ST+I+ LC + V++A L M+ PD++T TL++G C+ G+ EA+ L+++MV
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+ T+ +++ +CK G+ A +L M + K D V YS ++DG C ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++FN M + ++ +Y+I+I G C DD L + M I P+VVT+S LI
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K G++ +A EL EM RG+ P+ ITY+SL+D CK +H+D A ++ M +G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ T+ IL++G CK R+ D E+F+ + ++G D TY +I G C+ G + A L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M P+ VTY+I++ L G+++KA ++ ++
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 193/345 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S + ++ K K + L +M K I+ ++ T + +I+ FC +L A + +++
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+ TFS L++ LC EG+V EA ++ M++ G KPD++T ++L++G CL +
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M P+ +Y ++N +CK A+ L ++M NI D V YS +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLCK G + +A+ L NEM +G+ N+ITY+ L+ C D+ L++ M + I
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+V T+++L+D K G+L++A+E+ ++++ +G D TYT +I+G CK+ D+A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ M GC P+ T+ I+I + D +L R+M RG++
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 189/330 (57%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+DA +L+ +M+ R P V+ ++ L S Q + L QM +K I ++YT SI
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
+++ C+ K+ A + + +IK G +P+ +T+S+L++G CL V++A ++ + M M
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
PD+ + + ++NGLC +A+ L +M P+ VTY +++ +CKSG+ + A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
EL+ +M R + + + YS ++D LCK+ +DNA +L +M+ +GI ++ TY IL+ G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
C GR D ++ +D++ + N +V T++++I+ K+G EA L +M G PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+TY +I +E DKA +++ M+++G
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 173/302 (57%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S +IDS K+ + +A L+ EM+ + I+PD +TYT+LI GFC L +A +++ MV
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K +P++ TF+IL++ CK ++ + + M G D VTY++L+ G+C + ++N
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+++F M ++ P++ +Y I+++GLC + AL +F+++ + D+ Y+ +I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G+C + ++ DAW+L + +G+ P V TY+ ++ LCK + A L +KM+ G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD +TY IL+ G + ++ ++L G+++D T ++I+ L L L +
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDM 635
Query: 302 MS 303
+S
Sbjct: 636 LS 637
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 35/260 (13%)
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+ + A D+F M P V +S + + + K K D L L KQM + I ++ T S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+I+ C+ ++ A+ + ++ G PN IT+S+L++ LC V A+ L+ +M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 239 GILPDVYTYTILLDGL-----------------------------------CKGGRLKDA 263
G PD+ T L++GL CK G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
E+ + + + LD Y+I+I+GLCK G D A L ++ME G T + +TY I+I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 324 LFQEGDNDKAEKLLRQMIAR 343
G D KLLR MI R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKR 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ II +C V+DA++L+ + K + P V TY +I G C G L EA L +M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 112
PD +T++IL+ A +G ++ ++ + + G D T ++D
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 227/345 (65%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIID LCK K ++DA NL+ EM K I P+VVTY++LIS C G+ +A LL+ M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INPDV+TFS L+DA KEGK+ EA+ + M+K P +VTYSSL++G+C+ + +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ +F M PDV +Y+ +I G CK K V++ + +F++M + + VTY+ L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GL ++G A E+ EM S G+PPN++TY++LLD LCKN ++ A+ + + ++ +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P +YTY I+++G+CK G+++D ++F +L +KG DV Y MI+G C+ G +EA A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L +M+++G P++ Y +I A ++GD + + +L+++M + G
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 244 bits (624), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 206/344 (59%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I+ C+ + A + +M+ P++VT ++L++G+C ++ EAV L++QM
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V P+ TF+ L+ L K EA ++ M+ G +PD+VTY +++G C + +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ N M + +L P V Y+ +I+GLCK K +DDALNLFK+M T+ I P+VVTYSSLI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC GR SDA L+++M R + P+V T+S+L+DA K + A L +M + I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P + TY+ L++G C RL +A+++F+ ++ K DV TY +I G CK +E + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G + VTY I+I LFQ GD D A+++ ++M++ G+
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 194/345 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +++ LCK + A+NL ++M ++ P V+ Y T+I G C + +A+ L +M
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I P+V T+S L+ LC G+ +A +L+ MI+ PDV T+S+L+D + ++
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE +++ M + + P + +YS +ING C +D+A +F+ M +++ PDVVTY++LI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK R+ + E+ EM RGL N +TY+ L+ L + D A + K+M G+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ TY LLDGLCK G+L+ A VF+ L + TY IMI G+CK G ++ L
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G PD V Y +I ++G ++A+ L ++M G L
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 186/331 (56%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ C K +++A L +M P+ VT+ TLI G + + EA+ L+++MV
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K PD+ T+ ++V+ LCK G A N+L M +G +P V+ Y++++DG C ++
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + P+V +YS +I+ LC DA L M I PDV T+S+LID
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G++ +A +L +EM R + P+++TYSSL++ C + +D A + + M + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV TY L+ G CK R+++ EVF+++ +G + TY I+I GL + G D A +
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+M +G P+ +TY ++ L + G +KA
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 189/367 (51%), Gaps = 35/367 (9%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
++DA L+ EM+ R P ++ ++ L+S + + + L QM I + YT+SI
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC------------------- 115
L++ C+ ++ A VL M+K G +P++VT SSL++GYC
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 116 ----------------LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 159
L N+ ++A + + M PD+ +Y +++NGLCK D A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 160 NLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
NL +M + P V+ Y+++IDGLCK + DA L EM ++G+ PNV+TYSSL+ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 220 CKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 279
C +A L+ M + I PDV+T++ L+D K G+L +A++++ +++ + + +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 280 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
TY+ +ING C DEA + M C PD VTY +I + ++ ++ R+
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 340 MIARGLL 346
M RGL+
Sbjct: 422 MSQRGLV 428
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 169/298 (56%), Gaps = 1/298 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S +ID+ K+ + +A LY EM+ + I P +VTY++LI+GFC+ +L EA + MV
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K PDV T++ L+ CK +V+E V M + G + VTY+ L+ G + +
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A++IF M + P++ +Y+ +++GLCK ++ A+ +F+ + + P + TY+ +I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G+CK+G++ D W+L + +G+ P+V+ Y++++ C+ + A +L K+MK G L
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
P+ Y L+ + G + + E+ +++ G+ D T ++ N L DG D++
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 136/262 (51%)
Query: 82 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQS 141
E K+ +A + M+K P ++ +S L+ +N+ + + M + + + +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 142 YSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMH 201
YSI+IN C+ + AL + +M P++VT SSL++G C S RIS+A LV++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 202 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
G PN +T+++L+ L ++ A++LI +M +G PD+ TY ++++GLCK G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
A + + V Y +I+GLCK D+AL L +ME G P+ VTY +I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 322 YALFQEGDNDKAEKLLRQMIAR 343
L G A +LL MI R
Sbjct: 299 SCLCNYGRWSDASRLLSDMIER 320
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%)
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+++ A +F M + P + +S +++ + K+ D ++L +QM I + TYS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
LI+ C+ ++ A ++ +M G PN++T SSLL+ C + + A++L+ +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G P+ T+ L+ GL + +A + ++ KG D+ TY +++NGLCK G D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L++KME P + Y II L + D A L ++M +G+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 290 bits (741), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 208/322 (64%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +IDSLCKD +DA +L++EM K I DVVTY++LI G C G+ + +L +M+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++I PDV TFS L+D KEGK+ EAK + MI G PD +TY+SL+DG+C N ++
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F+ M PD+ +YSI+IN CK K VDD + LF+++ ++ + P+ +TY++L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+SG+++ A EL EM SRG+PP+V+TY LLD LC N ++ A+ + +KM+ +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ Y I++ G+C ++ DA +F L KG DV TY +MI GLCK G EA L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 302 MSKMEDNGCTPDAVTYEIIIYA 323
KM+++GCTPD TY I+I A
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRA 569
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 199/343 (58%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +I+ C+ K + A+++ PD +T++TL++GFC+ G++ EAV L+++MV
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
PD+ T S L++ LC +G+V EA ++ M++ G +PD VTY +++ C
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A D+F M + V YSI+I+ LCK DDAL+LF +M + I DVVTYSSLI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
GLC G+ D +++ EM R + P+V+T+S+L+D K + A L +M +GI P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D TY L+DG CK L +A ++F ++ KG D+ TY+I+IN CK D+ + L
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ G P+ +TY ++ Q G + A++L ++M++RG+
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 195/343 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +++ LCK A +L+ +M + I VV Y+ +I C G +A+ L N+M
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+K I DV T+S L+ LC +GK + +L MI PDVVT+S+L+D + ++
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A++++N M +APD +Y+ +I+G CK + +A +F M ++ PD+VTYS LI
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ CK+ R+ D L E+ S+GL PN ITY++L+ C++ ++ A L ++M +G+
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P V TY ILLDGLC G L A E+F+ + L + Y I+I+G+C D+A +L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+ D G PD VTY ++I L ++G +A+ L R+M G
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 190/339 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ST+++ C + V++A L M+ + PD+VT +TLI+G C+ G++ EA+ L+++MV
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD T+ +++ LCK G A ++ M + K VV YS ++D C +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +FN M + DV +YS +I GLC DD + ++M NI PDVVT+S+LI
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K G++ +A EL NEM +RG+ P+ ITY+SL+D CK + + A + M +G
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ TY+IL++ CK R+ D +F+++ KG + TY ++ G C+ G + A L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M G P VTY I++ L G+ +KA ++ +M
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 181/317 (57%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
I D+ T T +I+ +C +L A +L + PD TFS LV+ C EG+V EA
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
++ M++ ++PD+VT S+L++G CL V++A + + M PD +Y ++N L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
CK AL+LF++M NI VV YS +ID LCK G DA L NEM +G+ +V
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
+TYSSL+ LC + D+ ++++M + I+PDV T++ L+D K G+L +A+E++ +
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
++ +G D TY +I+G CK+ EA + M GC PD VTY I+I + +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 330 NDKAEKLLRQMIARGLL 346
D +L R++ ++GL+
Sbjct: 401 VDDGMRLFREISSKGLI 417
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 172/302 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S +ID K+ + +A LY+EM+ + I+PD +TY +LI GFC L EA + + MV
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K PD+ T+SIL+++ CK +V + + + G P+ +TY++L+ G+C ++N
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+++F M + P V +Y I+++GLC ++ AL +F++M +T + Y+ +I
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G+C + ++ DAW L + +G+ P+V+TY+ ++ LCK + A L +KMK G
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD +TY IL+ G L + E+ +++ + G++ D T ++I+ L L L +
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDM 617
Query: 302 MS 303
+S
Sbjct: 618 LS 619
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 166/331 (50%), Gaps = 35/331 (10%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
VNDA +L+ M+ R P + + L S Q +G M + I D+YT +I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
+++ C++ K+ A +VL K G +PD +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTI----------------------------- 141
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
++S ++NG C V +A+ L +M PD+VT S+LI+GLC GR+S+A
Sbjct: 142 ------TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
L++ M G P+ +TY +L+ LCK+ + A+ L +KM+ + I V Y+I++D L
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
CK G DA +F ++ +KG DV TY+ +I GLC DG +D+ ++ +M PD
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
VT+ +I +EG +A++L +MI RG+
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 138/263 (52%)
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
KV +A ++ MI+ P + ++ L + + M + D+ + +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
IMIN C+ K + A ++ + PD +T+S+L++G C GR+S+A LV+ M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
P+++T S+L++ LC V A+ LI +M G PD TY +L+ LCK G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
++F+ + + V Y+I+I+ LCKDG FD+AL+L ++ME G D VTY +I
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 324 LFQEGDNDKAEKLLRQMIARGLL 346
L +G D K+LR+MI R ++
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNII 312
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNH 223
+H +IT ++Y + +++DA +L M SR LP I ++ L A+ +
Sbjct: 26 LHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLP-TPIDFNRLCSAVARTK 84
Query: 224 HVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 283
D + K M+ GI D+YT TI+++ C+ +L A V GY D T++
Sbjct: 85 QYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFS 144
Query: 284 IMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
++NG C +G EA+AL+ +M + PD VT +I L +G +A L+ +M+
Sbjct: 145 TLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Query: 344 GL 345
G
Sbjct: 205 GF 206
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ II +C V+DA++L+ + K + PDVVTY +I G C G L EA L +M
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 61 VVKSINPDVYTFSILVDA 78
PD +T++IL+ A
Sbjct: 552 KEDGCTPDDFTYNILIRA 569
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 287 bits (734), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 219/340 (64%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++TIIDSLCK + V+DA NL+ EM K I P+VVTY++LIS C G+ +A LL+ M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ K INP++ TF+ L+DA KEGK EA+ + MIK PD+ TY+SL++G+C+ + +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+KA+ +F M + PD+ +Y+ +I G CK K V+D LF++M + D VTY++L
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GL G +A ++ +M S G+PP+++TYS LLD LC N ++ A+ + M+ I
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D+Y YT +++G+CK G++ D ++F L +KG +V TY MI+GLC L EA A
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L+ KM+++G PD+ TY +I A ++GD + +L+R+M
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 204/344 (59%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ C+ ++ A L +M+ P +VT ++L++G+C ++ +AV L++QMV
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD TF+ L+ L K EA ++ M++ G +P++VTY +++G C +++
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ N M ++ DV ++ +I+ LCK + VDDALNLFK+M T+ I P+VVTYSSLI
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC GR SDA +L+++M + + PN++T+++L+DA K A L M + I
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD++TY L++G C RL A+++F+ ++ K D+ TY +I G CK ++ L
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G D VTY +I LF +GD D A+K+ +QM++ G+
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 189/338 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ C K ++DA L +M+ PD +T+TTLI G + + EAV L+++MV
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ P++ T+ ++V+ LCK G + A N+L M + DVV +++++D C V+
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + P+V +YS +I+ LC DA L M + I P++VT+++LID
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G+ +A +L ++M R + P++ TY+SL++ C + +D A + + M + P
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D+ TY L+ G CK R++D E+F+++ +G D TYT +I GL DG D A +
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M +G PD +TY I++ L G +KA ++ M
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 178/319 (55%)
Query: 25 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGK 84
M+ R P + + L+S + + + L +M I+ ++YT++IL++ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 85 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
+ A +L M+K G +P +VT SSL++GYC ++ A + + M M PD +++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+I+GL +A+ L +M P++VTY +++GLCK G I A+ L+N+M +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ +V+ +++++D+LCK HVD+A++L K+M+ +GI P+V TY+ L+ LC GR DA
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
++ D++ K N ++ T+ +I+ K+G F EA L M PD TY +I
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 325 FQEGDNDKAEKLLRQMIAR 343
DKA+++ M+++
Sbjct: 301 CMHDRLDKAKQMFEFMVSK 319
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 153/279 (54%)
Query: 67 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 126
P ++ F+ L+ A+ K K ++ M + G ++ TY+ L++ +C ++++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 127 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK 186
M ++ P + + S ++NG C K + DA+ L QM PD +T+++LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 187 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
+ S+A LV+ M RG PN++TY +++ LCK +D A +L+ KM+ I DV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
+ ++D LCK + DA +F+++ KG +V TY+ +I+ LC G + +A L+S M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 307 DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ P+ VT+ +I A +EG +AEKL MI R +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 117/216 (54%)
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
M + P + ++ +++ + K+K D ++L ++M I+ ++ TY+ LI+ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 190 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTI 249
IS A L+ +M G P+++T SSLL+ C + +A++L+ +M G PD T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 250 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
L+ GL + +A + ++ +G ++ TY +++NGLCK G D A L++KME
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 310 CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
D V + II +L + D A L ++M +G+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 287 bits (734), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 223/340 (65%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YST+IDSLCK + V+DA NL++EM K I PDV TY++LIS C G+ +A LL+ M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INP+V TF+ L+DA KEGK+ EA+ + MI+ P++VTY+SL++G+C+ + +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ IF M + PDV +Y+ +ING CK K V D + LF+ M + + VTY++L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++ +A + +M S G+ PN++TY++LLD LCKN ++ A+ + + ++ +
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD+YTY I+ +G+CK G+++D ++F L +KG DV Y MI+G CK GL +EA
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L KM+++G PD+ TY +I A ++GD + +L+++M
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 244 bits (622), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 200/344 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ LC+ ++ A + +M+ P +VT +L++GFC ++ EAV L++QMV
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD TF+ LV L + K EA ++ M+ G +PD+VTY ++++G C E +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ N M + ++ DV YS +I+ LCK + VDDALNLF +M + I PDV TYSSLI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC GR SDA L+++M R + PNV+T++SL+DA K + A L +M + I
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ TY L++G C RL +AQ++F ++ K DV TY +ING CK + + L
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M G + VTY +I+ FQ D D A+ + +QM++ G+
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 185/331 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+++++ C +++A L +M+ PD VT+TTL+ G + EAV L+ +MVV
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K PD+ T+ +++ LCK G+ A N+L M KG + DVV YS+++D C V+
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + PDV +YS +I+ LC DA L M I P+VVT++SLID
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G++ +A +L +EM R + PN++TY+SL++ C + +D A + M + LP
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV TY L++G CK ++ D E+F+D+ +G + TYT +I+G + D A +
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+M +G P+ +TY ++ L + G +KA
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 192/332 (57%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+++A +L+ EM+ R P +V ++ L+S + + + +M + ++ ++YT++I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
+++ LC+ ++ A +L M+K G P +VT +SL++G+C N +++A + + M M
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
PD +++ +++GL + +A+ L ++M + PD+VTY ++I+GLCK G A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
L+N+M + +V+ YS+++D+LCK HVD+A++L +M ++GI PDV+TY+ L+ L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
C GR DA + D+L + N +V T+ +I+ K+G EA L +M P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
VTY +I D+A+++ M+++ L
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 144/259 (55%), Gaps = 1/259 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I+ C +++A +++ M++K PDVVTY TLI+GFC ++ + + L M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + + T++ L+ + A+ V M+ G P+++TY++L+DG C ++
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA +F + + ++ PD+ +Y+IM G+CK V+D +LF + + + PDV+ Y+++I
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK G +A+ L +M G P+ TY++L+ A ++ + LIK+M+
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFA 587
Query: 242 PDVYTYTILLDGLCKGGRL 260
D TY ++ D L GRL
Sbjct: 588 GDASTYGLVTDML-HDGRL 605
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 138/260 (53%)
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
K+ EA ++ M+K P +V +S L+ + + + M + ++ ++ +Y+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
IMIN LC+ + AL + +M P +VT +SL++G C RIS+A LV++M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
G P+ +T+++L+ L +++ A++L+++M +G PD+ TY +++GLCK G A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
+ + DV Y+ +I+ LCK D+AL L ++M++ G PD TY +I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 324 LFQEGDNDKAEKLLRQMIAR 343
L G A +LL M+ R
Sbjct: 285 LCNYGRWSDASRLLSDMLER 304
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 127/227 (55%)
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
++++A D+F M + P + +S +++ + K+K D ++ ++M ++ ++ TY+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+I+ LC+ ++S A ++ +M G P+++T +SLL+ C + + A++L+ +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G PD T+T L+ GL + + +A + + +++KG D+ TY +INGLCK G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L L++KME D V Y +I +L + D A L +M +G+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 228/346 (65%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIID+LC K VNDA NL++EM K I P+VVTY +LI C G+ +A LL+ M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INP+V TFS L+DA KEGK+ EA+ + MIK PD+ TYSSL++G+C+ + +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ +F M + P+V +Y+ +I G CK K V++ + LF++M + + VTY++L
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GL ++G A ++ +M S G+PP++ITYS LLD LCK ++ A+ + + ++ +
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD+YTY I+++G+CK G+++D ++F L +KG +V YT MI+G C+ GL +EA A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
L +M+++G P++ TY +I A ++GD + +L+++M + G +
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 202/345 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T+++ LCK ++ A +L +M +I DVV YTT+I C + +A+ L +M
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I P+V T++ L+ LC G+ +A +L+ MI+ P+VVT+S+L+D + ++
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE +++ M + + PD+ +YS +ING C +D+A ++F+ M +++ P+VVTY++LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK+ R+ + EL EM RGL N +TY++L+ L + D A + KKM G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ TY+ILLDGLCK G+L+ A VF+ L D+ TY IMI G+CK G ++ L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G P+ + Y +I ++G ++A+ L R+M G L
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 202/344 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ C+ + A + +M+ PD+VT ++L++G+C ++ EAV L++QM
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V P+ TF+ L+ L K EA ++ M+ G +PD+ TY ++++G C +++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M + ++ DV Y+ +I+ LC K V+DALNLF +M + I P+VVTY+SLI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC GR SDA L+++M R + PNV+T+S+L+DA K + A L +M + I
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD++TY+ L++G C RL +A+ +F+ ++ K +V TY +I G CK +E + L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G + VTY +I LFQ GD D A+K+ ++M++ G+
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 185/331 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ C K +++A L +M P+ VT+ TLI G + + EAV L+++MV
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ PD++T+ +V+ LCK G + A ++L M KG + DVV Y++++D C VN
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + P+V +Y+ +I LC DA L M I P+VVT+S+LID
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G++ +A +L +EM R + P++ TYSSL++ C + +D A + + M + P
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+V TY L+ G CK R+++ E+F+++ +G + TY +I GL + G D A +
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
KM +G PD +TY I++ L + G +KA
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 192/367 (52%), Gaps = 35/367 (9%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
++DA +L+ EM+ R P +V + L+S + + + L +M I+ D+Y+++I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC------------------- 115
L++ C+ ++ A VL M+K G +PD+VT SSL++GYC
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 116 ----------------LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 159
L N+ ++A + + M PD+ +Y ++NGLCK +D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 160 NLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
+L K+M I DVV Y+++ID LC ++DA L EM ++G+ PNV+TY+SL+ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 220 CKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 279
C +A L+ M + I P+V T++ L+D K G+L +A++++ +++ + + D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 280 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
TY+ +ING C DEA + M C P+ VTY +I + ++ +L R+
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 340 MIARGLL 346
M RGL+
Sbjct: 421 MSQRGLV 427
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 173/297 (58%), Gaps = 1/297 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S +ID+ K+ + +A LY EM+ + I PD+ TY++LI+GFC+ +L EA + M+
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P+V T++ L+ CK +V+E + M + G + VTY++L+ G + +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ IF M + PD+ +YSI+++GLCK ++ AL +F+ + + PD+ TY+ +I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G+CK+G++ D W+L + +G+ PNVI Y++++ C+ + A +L ++MK G L
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
P+ TY L+ + G + E+ +++ G+ D T +++IN L DG +++
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 118/227 (51%)
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+++ A D+F M + P + ++ +++ + K+ D ++L ++M I+ D+ +Y+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
LI+ C+ ++ A ++ +M G P+++T SSLL+ C + A++L+ +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
P+ T+ L+ GL + +A + ++ +G D+ TY ++NGLCK G D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L+L+ KME D V Y II AL + + A L +M +G+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 219/340 (64%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++TIIDSLCK + V+DA NL+ EM K I P+VVTY++LIS C G+ +A LL+ M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ K INP++ TF+ L+DA KEGK EA+ + MIK PD+ TY+SL++G+C+ + +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+KA+ +F M + PDV +Y+ +I G CK K V+D LF++M + D VTY++L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GL G +A ++ +M S G+PP+++TYS LLD LC N ++ A+ + M+ I
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D+Y YT +++G+CK G++ D ++F L +KG +V TY MI+GLC L EA A
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L+ KM+++G P++ TY +I A ++GD + +L+R+M
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 203/344 (59%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ C+ ++ A L +M+ P +VT ++L++G+C ++ +AV L++QMV
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD TF+ L+ L K EA ++ M++ G +P++VTY +++G C + +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ N M ++ DV ++ +I+ LCK + VDDALNLFK+M T+ I P+VVTYSSLI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC GR SDA +L+++M + + PN++T+++L+DA K A L M + I
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD++TY L++G C RL A+++F+ ++ K DV TY +I G CK ++ L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G D VTY +I LF +GD D A+K+ +QM++ G+
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 188/338 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ C K ++DA L +M+ PD +T+TTLI G + + EAV L+++MV
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ P++ T+ ++V+ LCK G A N+L M + DVV +++++D C V+
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + P+V +YS +I+ LC DA L M + I P++VT+++LID
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G+ +A +L ++M R + P++ TY+SL++ C + +D A + + M + P
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV TY L+ G CK R++D E+F+++ +G D TYT +I GL DG D A +
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M +G PD +TY I++ L G +KA ++ M
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 187/345 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ ++ K K + +L +M I + TY LI+ FC Q+ A+ LL +M+
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P + T S L++ C ++ +A ++ M++ G +PD +T+++L+ G L N+ +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M + P++ +Y +++NGLCK D ALNL +M I DVV ++++I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D LCK + DA L EM ++G+ PNV+TYSSL+ LC +A L+ M + I
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ T+ L+D K G+ +A++++ D++ + + D+ TY ++NG C D+A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
M C PD VTY +I + + +L R+M RGL+
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 122/227 (53%)
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+++ A +F M + P + ++ +++ + K+K D ++L ++M I + TY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
LI+ C+ +IS A L+ +M G P+++T SSLL+ C + +A++L+ +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G PD T+T L+ GL + +A + ++ +G ++ TY +++NGLCK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L L++KME D V + II +L + D A L ++M +G+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 284 bits (727), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 222/340 (65%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIID+LC K VNDA NL++EM K I P+VVTY +LI C G+ +A LL+ M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INP+V TFS L+DA KEGK+ EA+ + MIK PD+ TYSSL++G+C+ + +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ +F M + P+V +Y+ +I G CK K VD+ + LF++M + + VTY++L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++ +A + +M S G+ P+++TYS LLD LC N V+ A+ + + ++ +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD+YTY I+++G+CK G+++D ++F L +KG +V TYT M++G C+ GL +EA A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L +M++ G PD+ TY +I A ++GD + +L+R+M
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 203/345 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I+ C+ ++ A + ++M+ PD+VT +L++GFC ++ +AV L+ QMV
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD +TF+ L+ L + + EA ++ M+ G +PD+VTY +++G C +++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M + ++ P V Y+ +I+ LC K V+DALNLF +M + I P+VVTY+SLI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC GR SDA L+++M R + PNV+T+S+L+DA K + A L +M + I
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD++TY+ L++G C RL +A+ +F+ ++ K +V TY +I G CK DE + L
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+M G + VTY +I+ FQ + D A+ + +QM++ G+L
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 202/380 (53%), Gaps = 35/380 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y I + D ++DA NL+ +M+ R P +V ++ L+S + + + L QM
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I+ ++YT+SIL++ C+ ++ A VLA M+K G +PD+VT +SL++G+C N ++
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 122 KAEDI---------------FNTMT-----------------RMEL---APDVQSYSIMI 146
A + FNT+ RM + PD+ +Y I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
NGLCK +D AL+L K+M I P VV Y+++ID LC ++DA L EM ++G+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
PNV+TY+SL+ LC +A L+ M + I P+V T++ L+D K G+L +A+++
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+ +++ + + D+ TY+ +ING C DEA + M C P+ VTY +I +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 327 EGDNDKAEKLLRQMIARGLL 346
D+ +L R+M RGL+
Sbjct: 409 AKRVDEGMELFREMSQRGLV 428
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 182/331 (54%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+++++ C ++DA +L +M+ PD T+ TLI G + EAV L+++MVV
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K PD+ T+ I+V+ LCK G + A ++L M +G +P VV Y++++D C VN
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + P+V +Y+ +I LC DA L M I P+VVT+S+LID
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G++ +A +L +EM R + P++ TYSSL++ C + +D A + + M + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+V TY L+ G CK R+ + E+F+++ +G + TYT +I+G + D A +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+M +G PD +TY I++ L G + A
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 172/301 (57%), Gaps = 1/301 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S +ID+ K+ + +A LY EM+ + I PD+ TY++LI+GFC+ +L EA + M+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P+V T++ L+ CK +V E + M + G + VTY++L+ G+ E +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ +F M + PD+ +YSI+++GLC V+ AL +F+ + + PD+ TY+ +I
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G+CK+G++ D W+L + +G+ PNV+TY++++ C+ + A +L ++MK +G L
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY L+ + G + E+ +++ + D T ++ N L DG D++
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML-HDGRLDKSFLK 627
Query: 302 M 302
M
Sbjct: 628 M 628
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 284 bits (727), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 137/344 (39%), Positives = 217/344 (63%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YSTIIDSLC+D ++ A +L+ EM K I VVTY +L+ G C G+ + LL MV
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I P+V TF++L+D KEGK++EA + MI G P+++TY++LMDGYC+ N ++
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++ + M R + +PD+ +++ +I G C +K VDD + +F+ + + + VTYS L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+SG+I A EL EM S G+ P+V+TY LLD LC N ++ A+ + + ++ +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ YT +++G+CKGG+++DA +F L KG +V TYT+MI+GLCK G EA L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ KME++G P+ TY +I A ++GD + KL+ +M + G
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 191/345 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S ++ + K N + ++ I+ ++ T +I+ FC + A +L +++
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD TF+ L+ L EGKV EA ++ M++ G +PDVVTY+S+++G C + +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A D+ M + DV +YS +I+ LC+ +D A++LFK+M T+ I VVTY+SL+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GLCK+G+ +D L+ +M SR + PNVIT++ LLD K + A L K+M +GI
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ TY L+DG C RL +A + ++ + D+ T+T +I G C D+ + +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G +AVTY I++ Q G AE+L ++M++ G+L
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 183/333 (54%), Gaps = 3/333 (0%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
+I+ C+ AY++ +++ PD T+ TLI G + G++ EAV L+++MV
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
PDV T++ +V+ +C+ G A ++L M + K DV TYS+++D C ++ A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+F M + V +Y+ ++ GLCK +D L K M + I P+V+T++ L+D
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
K G++ +A EL EM +RG+ PN+ITY++L+D C + + A +++ M PD+
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
T+T L+ G C R+ D +VF+++ +G + TY+I++ G C+ G A L +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
M +G PD +TY I++ L DN K EK L
Sbjct: 429 MVSHGVLPDVMTYGILLDGLC---DNGKLEKAL 458
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 184/331 (55%)
Query: 16 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSIL 75
+DA L+ EM+ R P +V ++ S Q + Q+ + I ++YT +I+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
++ C+ K A +VL ++K G +PD T+++L+ G L +V++A + + M
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
PDV +Y+ ++NG+C+ AL+L ++M N+ DV TYS++ID LC+ G I A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
L EM ++G+ +V+TY+SL+ LCK ++ L+K M + I+P+V T+ +LLD
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
K G+L++A E++++++ +G + ++ TY +++G C EA ++ M N C+PD V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
T+ +I D K+ R + RGL+
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+TII+ +CK V DA+NL+ + K + P+V+TYT +ISG C G L EA LL +M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 112
P+ T++ L+ A ++G + + ++ M G D + ++D
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 227/345 (65%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIID LCK K ++DA NL++EM K I PDV TY++LIS C G+ +A LL+ M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INP+V TFS L+DA KEGK+ EA+ + MIK PD+ TYSSL++G+C+ + +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ +F M + P+V +YS +I G CK K V++ + LF++M + + VTY++L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++ +A + +M S G+ PN++TY+ LLD LCKN + A+ + + ++ +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD+YTY I+++G+CK G+++D E+F +L +KG + +V Y MI+G C+ G +EA +
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L+ KM+++G P++ TY +I A ++GD + + +L+++M + G
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 247 bits (631), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 203/345 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T+++ LCK ++ A +L +M +I DVV Y T+I G C + +A+ L +M
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I PDV+T+S L+ LC G+ +A +L+ MI+ P+VVT+S+L+D + ++
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE +++ M + + PD+ +YS +ING C +D+A ++F+ M +++ P+VVTYS+LI
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK+ R+ + EL EM RGL N +TY++L+ + DNA + K+M G+
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ TY ILLDGLCK G+L A VF+ L D+ TY IMI G+CK G ++ L
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G +P+ + Y +I ++G ++A+ LL++M G L
Sbjct: 526 FCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Score = 244 bits (623), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 206/344 (59%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS I+ C+ ++ A + ++M+ PD+VT ++L++G+C ++ +AV L++QMV
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD +TF+ L+ L K EA ++ M++ G +PD+VTY ++++G C +++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M + ++ DV Y+ +I+GLCK K +DDALNLF +M + I PDV TYSSLI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC GR SDA L+++M R + PNV+T+S+L+DA K + A L +M + I
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD++TY+ L++G C RL +A+ +F+ ++ K +V TY+ +I G CK +E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G + VTY +I+ FQ D D A+ + +QM++ G+
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 186/331 (56%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ C K ++DA L +M+ PD T+TTLI G + + EAV L++QMV
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ PD+ T+ +V+ LCK G + A ++L M KG + DVV Y++++DG C ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + PDV +YS +I+ LC DA L M I P+VVT+S+LID
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G++ +A +L +EM R + P++ TYSSL++ C + +D A + + M + P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+V TY+ L+ G CK R+++ E+F+++ +G + TYT +I+G + D A +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+M G P+ +TY I++ L + G KA
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 194/367 (52%), Gaps = 35/367 (9%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
V+DA +L+ +M+ R P +V + L+S + + + + L QM I+ D+YT+SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC------------------- 115
++ C+ ++ A VLA M+K G +PD+VT SSL++GYC
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 116 ----------------LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 159
L N+ ++A + + M + PD+ +Y ++NGLCK +D AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 160 NLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
+L K+M I DVV Y+++IDGLCK + DA L EM ++G+ P+V TYSSL+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 220 CKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 279
C +A L+ M + I P+V T++ L+D K G+L +A++++ +++ + + D+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 280 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
TY+ +ING C DEA + M C P+ VTY +I + ++ +L R+
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 340 MIARGLL 346
M RGL+
Sbjct: 424 MSQRGLV 430
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 181/344 (52%), Gaps = 14/344 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ + S C ++ A Y E+L R+S D++ ++ +AV L MV
Sbjct: 30 FFNLCGSGCWERSFASASGDYREILRNRLS-DII-------------KVDDAVDLFGDMV 75
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P + F+ L+ A+ K K + ++ M G D+ TYS ++ +C ++++
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M ++ PD+ + S ++NG C K + DA+ L QM PD T+++LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GL + S+A LV++M RG P+++TY ++++ LCK +D A+SL+KKM+ I
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
DV Y ++DGLCK + DA +F ++ KG DV TY+ +I+ LC G + +A L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+S M + P+ VT+ +I A +EG +AEKL +MI R +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 211/344 (61%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS IID LCKD +++A+NL++EM K D++TY TLI GFC G+ + LL M+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I+P+V TFS+L+D+ KEGK++EA +L M++ G P+ +TY+SL+DG+C N +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M PD+ +++I+ING CK +DD L LF++M + + VTY++L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+SG++ A +L EM SR + P++++Y LLD LC N ++ A+ + K++ +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D+ Y I++ G+C ++ DA ++F L +KG LD R Y IMI+ LC+ +A L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
KM + G PD +TY I+I A + D A +L+ +M + G
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 197/341 (57%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S +I+ C+ + ++ A++ +++ PD V + TL++G C+ ++ EA+ L+++MV
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
P + T + LV+ LC GKV +A ++ M++ G +P+ VTY +++ C +
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++ M + D YSI+I+GLCK +D+A NLF +M + D++TY++LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G C +GR D +L+ +M R + PNV+T+S L+D+ K + A L+K+M +GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+ TY L+DG CK RL++A ++ ++ KG + D+ T+ I+ING CK D+ L L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+M G + VTY ++ Q G + A+KL ++M++R
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 190/333 (57%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++T+++ LC + V++A L M+ P ++T TL++G C+ G++ +AV L+++M
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V P+ T+ +++ +CK G+ A +L M + K D V YS ++DG C +
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A ++FN M D+ +Y+ +I G C DD L + M I+P+VVT+S L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
ID K G++ +A +L+ EM RG+ PN ITY+SL+D CK + ++ AI ++ M +G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD+ T+ IL++G CK R+ D E+F+++ ++G + TY ++ G C+ G + A
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
L +M PD V+Y+I++ L G+ +KA
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 200/343 (58%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+T+++ LC + V+DA L M+ P+ VTY +++ C GQ A+ LL +M
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
++I D +SI++D LCK+G + A N+ M G K D++TY++L+ G+C +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+ M + +++P+V ++S++I+ K + +A L K+M I P+ +TY+SLID
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G CK R+ +A ++V+ M S+G P+++T++ L++ CK + +D+ + L ++M +G++
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+ TY L+ G C+ G+L+ A+++FQ+++ + D+ +Y I+++GLC +G ++AL +
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
K+E + D Y III+ + D A L + +G+
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 190/345 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ + ++ K K L +M +K I+ + T + +I+ FC +L A + +++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD F+ L++ LC E +V EA ++ M++ G KP ++T ++L++G CL +V+
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + + M P+ +Y ++N +CK A+ L ++M NI D V YS +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLCK G + +A+ L NEM +G ++ITY++L+ C D+ L++ M + I
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+V T+++L+D K G+L++A ++ ++++ +G + TY +I+G CK+ +EA+ +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ M GC PD +T+ I+I + D +L R+M RG++
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 185/330 (56%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+DA +L+ +M+ R P V+ + L S Q + + L QM K I +YT SI
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
+++ C+ K+ A + + ++K G +PD V +++L++G CL V++A ++ + M M
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
P + + + ++NGLC V DA+ L +M P+ VTY +++ +CKSG+ + A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
EL+ +M R + + + YS ++D LCK+ +DNA +L +M+ +G D+ TY L+ G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
C GR D ++ +D++ + + +V T++++I+ K+G EA L+ +M G P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+TY +I +E ++A +++ MI++G
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 164/302 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S +IDS K+ + +A L EM+ + I+P+ +TY +LI GFC +L+EA+ +++ M+
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K +PD+ TF+IL++ CK ++ + + M G + VTY++L+ G+C ++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ +F M + PD+ SY I+++GLC ++ AL +F ++ + D+ Y +I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G+C + ++ DAW+L + +G+ + Y+ ++ LC+ + A L +KM +G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY IL+ A E+ +++ G+ DV T ++IN L L L +
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDM 635
Query: 302 MS 303
+S
Sbjct: 636 LS 637
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 208/316 (65%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YST+IDSLCK + +DA NL++EM K + P+V+TY++LIS C + +A LL+ M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INP+V TF+ L+DA KEGK+ EA+ + MIK PD+ TYSSL++G+C+ + +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ +F M + P+V +Y+ +ING CK K +D+ + LF++M + + VTY++L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++ +A + +M S G+ PN++TY++LLD LCKN ++ A+ + + ++ +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P +YTY I+++G+CK G+++D ++F L +KG DV Y MI+G C+ GL +EA A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 301 LMSKMEDNGCTPDAVT 316
L KM ++G PD+ T
Sbjct: 562 LFRKMREDGPLPDSGT 577
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 202/344 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ C+ ++ A L +M+ P +VT ++L++G+C ++ +AV L++QMV
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD TF+ L+ L K EA ++ M++ G +P++VTY +++G C +++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ N M ++ +V YS +I+ LCK + DDALNLF +M + + P+V+TYSSLI
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC R SDA L+++M R + PNV+T+++L+DA K + A L +M + I
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD++TY+ L++G C RL +A+ +F+ ++ K +V TY +ING CK DE + L
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G + VTY +I+ FQ D D A+ + +QM++ G+
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 200/345 (57%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +++ LCK ++ A+NL ++M A +I +VV Y+T+I C +A+ L +M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + P+V T+S L+ LC + +A +L+ MI+ P+VVT+++L+D + ++
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE +++ M + + PD+ +YS +ING C +D+A ++F+ M +++ P+VVTY++LI
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G CK+ RI + EL EM RGL N +TY++L+ + DNA + K+M G+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ TY LLDGLCK G+L+ A VF+ L + TY IMI G+CK G ++ L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G PD + Y +I ++G ++A+ L R+M G L
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 191/345 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ ++ K K + +L +M IS ++ TY LI+ FC Q+ A+ LL +M+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P + T S L++ C ++ +A ++ M++ G +PD +T+++L+ G L N+ +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M + P++ +Y +++NGLCK +D A NL +M I +VV YS++I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D LCK DA L EM ++G+ PNVITYSSL+ LC +A L+ M + I
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+V T+ L+D K G+L +A++++ +++ + + D+ TY+ +ING C DEA +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
M C P+ VTY +I + D+ +L R+M RGL+
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 185/331 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ C K ++DA L +M+ PD +T+TTLI G + + EAV L+++MV
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ P++ T+ ++V+ LCK G + A N+L M + +VV YS+++D C +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + P+V +YS +I+ LC + DA L M I P+VVT+++LID
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G++ +A +L +EM R + P++ TYSSL++ C + +D A + + M + P
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+V TY L++G CK R+ + E+F+++ +G + TYT +I+G + D A +
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+M +G P+ +TY ++ L + G +KA
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 161/297 (54%)
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
+L +A+GL MV P ++ F+ L+ A+ K K ++ M + G ++ TY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
L++ +C ++++ A + M ++ P + + S ++NG C K + DA+ L QM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
PD +T+++LI GL + S+A LV+ M RG PN++TY +++ LCK +D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
+L+ KM+ I +V Y+ ++D LCK DA +F ++ KG +V TY+ +I+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
LC + +A L+S M + P+ VT+ +I A +EG +AEKL +MI R +
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%)
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y ++ S ++ DA L M P++ ++ LL A+ K D ISL +KM+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
GI ++YTY IL++ C+ ++ A + ++ GY + T + ++NG C
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+A+AL+ +M + G PD +T+ +I+ LF +A L+ +M+ RG
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 216/348 (62%), Gaps = 3/348 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+TIIDSLCK+ VN A +L+ +M I PDVV YT+L++G C G+ ++A LL M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I PDV TF+ L+DA KEGK +A+ + MI+ P++ TY+SL++G+C+ V
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A +F M PDV +Y+ +ING CK K VDDA+ +F +M + +T + +TY++L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-- 238
I G + G+ + A E+ + M SRG+PPN+ TY+ LL LC N V A+ + + M+ +
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 239 -GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
G+ P+++TY +LL GLC G+L+ A VF+D+ + ++ + TYTI+I G+CK G
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
A+ L + G P+ VTY +I LF+EG +A L R+M G+
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 195/330 (59%)
Query: 16 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSIL 75
N+A +L++ M+ R P ++ +T L++ + + + L + + + ++ D+YT ++L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
++ C+ + A + L M+K G +PD+VT++SL++G+CL N + +A + N M M +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
PDV Y+ +I+ LCK V+ AL+LF QM I PDVV Y+SL++GLC SGR DA
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
L+ M R + P+VIT+++L+DA K +A L +M I P+++TYT L++G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
G + +A+++F + KG DV YT +ING CK D+A+ + +M G T + +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
TY +I Q G + A+++ M++RG+
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 181/342 (52%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +++ + K K + NL + +S D+ T L++ FC Q A L +M+
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD+ TF+ L++ C +++EA +++ M++ G KPDVV Y++++D C VN
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F+ M + PDV Y+ ++NGLC DA +L + M I PDV+T+++LI
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K G+ DA EL NEM + PN+ TY+SL++ C VD A + M+ +G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV YT L++G CK ++ DA ++F ++ KG + TYT +I G + G + A +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
S M G P+ TY ++++ L G KA + M R
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 160/297 (53%)
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
Q EA+ L MV P + F+ L++ + K K N+ + G D+ T +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
LM+ +C ++ A M ++ PD+ +++ +ING C +++A+++ QM
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
I PDVV Y+++ID LCK+G ++ A L ++M + G+ P+V+ Y+SL++ LC + +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
SL++ M + I PDV T+ L+D K G+ DA+E++ +++ ++ TYT +ING
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
C +G DEA + ME GC PD V Y +I + D A K+ +M +GL
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 105/208 (50%), Gaps = 38/208 (18%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF----------------- 44
Y+++I+ CK K V+DA ++ EM K ++ + +TYTTLI GF
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 45 ------------------CIVGQLKEAVGLLNQMVVKSIN---PDVYTFSILVDALCKEG 83
C G++K+A+ + M + ++ P+++T+++L+ LC G
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
K+++A V M K ++TY+ ++ G C +V A ++F ++ + P+V +Y+
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENIT 171
MI+GL + + +A LF++M + ++
Sbjct: 500 TMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
Query: 177 YSSLIDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
Y ++ S + ++A +L M SR LP ++I ++ LL+ + K D I+L +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLP-SIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
+ G+ D+YT +L++ C+ + A ++ G+ D+ T+T +ING C
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+EA++++++M + G PD V Y II +L + G + A L QM G+
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI 208
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 209/343 (60%), Gaps = 8/343 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ IIDSLCK K VNDA++ + E+ K I P+VVTYT L++G C + +A LL+ M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I P+V T+S L+DA K GKV EAK + M++ PD+VTYSSL++G CL + ++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F+ M DV SY+ +ING CK K V+D + LF++M + + VTY++LI
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G ++G + A E ++M G+ P++ TY+ LL LC N ++ A+ + + M+ + +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D+ TYT ++ G+CK G++++A +F L +KG D+ TYT M++GLC GL E AL
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+KM+ G + T +GD + +L+++M++ G
Sbjct: 493 YTKMKQEGLMKNDCT--------LSDGDITLSAELIKKMLSCG 527
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 198/330 (60%)
Query: 11 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVY 70
+D +NDA +L+S+M+ R P +V + L+S + + + L +M V I D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
TF+I+++ C +V A ++L M+K G +PD VT SL++G+C N V+ A + + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
+ PD+ +Y+ +I+ LCK K V+DA + FK++ + I P+VVTY++L++GLC S R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 191 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL 250
SDA L+++M + + PNVITYS+LLDA KN V A L ++M I PD+ TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 251 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 310
++GLC R+ +A ++F ++ KG DV +Y +ING CK ++ + L +M G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 311 TPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+ VTY +I FQ GD DKA++ QM
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 241 bits (614), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 197/343 (57%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
++++ C+ V+DA +L +M+ PD+V Y +I C ++ +A ++ K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
I P+V T++ LV+ LC + +A +L+ MIK P+V+TYS+L+D + +V +A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
+++F M RM + PD+ +YS +INGLC +D+A +F M ++ DVV+Y++LI+G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
CK+ R+ D +L EM RGL N +TY++L+ + VD A +M GI PD
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
++TY ILL GLC G L+ A +F+D+ + +LD+ TYT +I G+CK G +EA +L
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G PD VTY ++ L +G + E L +M GL+
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 190/342 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ ++ K K + +L +M I D+ T+ +I+ FC Q+ A+ +L +M+
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD T LV+ C+ +V +A +++ M++ G KPD+V Y++++D C VN
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A D F + R + P+V +Y+ ++NGLC DA L M + ITP+V+TYS+L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K+G++ +A EL EM + P+++TYSSL++ LC + +D A + M +G L
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
DV +Y L++G CK R++D ++F+++ +G + TY +I G + G D+A
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
S+M+ G +PD TY I++ L G+ +KA + M R
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 254 bits (648), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 129/313 (41%), Positives = 196/313 (62%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIID LCK K V++A +L + M I PDVVTY +LISG C G+ +A +++ M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM 247
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I PDV+TF+ L+DA KEG+V EA+ MI+ PD+VTYS L+ G C+ + +
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++AE++F M PDV +YSI+ING CK K V+ + LF +M + + VTY+ L
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G C++G+++ A E+ M G+ PN+ITY+ LL LC N ++ A+ ++ M+ G+
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D+ TY I++ G+CK G + DA +++ L +G D+ TYT M+ GL K GL EA A
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487
Query: 301 LMSKMEDNGCTPD 313
L KM+++G P+
Sbjct: 488 LFRKMKEDGILPN 500
Score = 231 bits (588), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 195/345 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ ++++ C+ V DA ++ +M+ P+VV Y T+I G C Q+ A+ LLN+M
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I PDV T++ L+ LC G+ +A +++ M K PDV T+++L+D V+
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE+ + M R L PD+ +YS++I GLC +D+A +F M ++ PDVVTYS LI
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G CKS ++ +L EM RG+ N +TY+ L+ C+ ++ A + ++M G+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P++ TY +LL GLC G+++ A + D+ G + D+ TY I+I G+CK G +A +
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G PD TY ++ L+++G +A+ L R+M G+L
Sbjct: 454 YCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 205/342 (59%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
+++ C+ ++ A + +M+ P +VT+ +L++GFC ++ +A+ + +QMV
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
P+V ++ ++D LCK +V A ++L M K G PDVVTY+SL+ G C + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+ + MT+ E+ PDV +++ +I+ K V +A +++M ++ PD+VTYS LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
C R+ +A E+ M S+G P+V+TYS L++ CK+ V++ + L +M +G++ +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
TYTIL+ G C+ G+L A+E+F+ ++ G + ++ TY ++++GLC +G ++AL +++
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
M+ NG D VTY III + + G+ A + + +GL+
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Score = 220 bits (561), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 195/331 (58%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
++D+ +L+ M+ R P + ++ L+S + + + L QM + I ++ T +I
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L++ C+ ++ A + L MIK G +P +VT+ SL++G+C + V A +F+ M M
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
P+V Y+ +I+GLCK K VD+AL+L +M + I PDVVTY+SLI GLC SGR SDA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
+V+ M R + P+V T+++L+DA K V A ++M + + PD+ TY++L+ GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
C RL +A+E+F ++ KG DV TY+I+ING CK + + L +M G +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
VTY I+I + G + AE++ R+M+ G+
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 186/344 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S ++ ++ K K + L+ +M I ++ T L++ FC QL A+ L +M+
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P + TF L++ C+ +V +A + M+ G KP+VV Y++++DG C +V+
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A D+ N M + + PDV +Y+ +I+GLC DA + M I PDV T+++LI
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K GR+S+A E EM R L P+++TYS L+ LC +D A + M +G
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV TY+IL++G CK +++ ++F ++ +G + TYTI+I G C+ G + A +
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G P+ +TY ++++ L G +KA +L M G+
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 162/298 (54%)
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
+L +++ L MV P + FS L+ A+ K K + M G ++ T +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
L++ +C ++++ A M ++ P + ++ ++NG C+ V DAL +F QM
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
P+VV Y+++IDGLCKS ++ +A +L+N M G+ P+V+TY+SL+ LC + +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
++ M + I PDV+T+ L+D K GR+ +A+E +++++ + + D+ TY+++I G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
LC DEA + M GC PD VTY I+I + + KL +M RG++
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 142 YSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMH 201
Y M+ + +DD+L+LF M P + +S L+ + K + L +M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 202 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
G+P N+ T + LL+ C+ + A+S + KM G P + T+ LL+G C+G R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
DA +F ++ GY +V Y +I+GLCK D AL L+++ME +G PD VTY +I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 322 YALFQEGDNDKAEKLLRQMIAR 343
L G A +++ M R
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKR 250
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 251 bits (640), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 215/346 (62%), Gaps = 3/346 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++TIIDSLCK + V A +L++EM K I P+VVTY +LI+ C G+ +A LL+ M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ K INP+V TF+ L+DA KEGK+ EA+ + MI+ PD +TY+ L++G+C+ N +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ +F M + P++Q+Y+ +ING CK K V+D + LF++M + + VTY+++
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++G A + +M S +P +++TYS LL LC +D A+ + K ++ +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+++ Y +++G+CK G++ +A ++F L IK DV TY MI+GLC L EA
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP---DVVTYNTMISGLCSKRLLQEADD 556
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
L KM+++G P++ TY +I A ++ D + +L+++M + G +
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV 602
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 205/341 (60%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS I+ C+ ++ A + ++M+ PD+VT ++L++G+C ++ +AV L++QMV
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD +TF+ L+ L K EA ++ M++ G +PD+VTY ++++G C +++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ N M + +V ++ +I+ LCK + V+ A++LF +M T+ I P+VVTY+SLI
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ LC GR SDA L++ M + + PNV+T+++L+DA K + A L ++M + I
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY +L++G C RL +A+++F+ ++ K +++TY +ING CK ++ + L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
+M G + VTY II FQ GD D A+ + +QM++
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 189/332 (56%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
V+DA +L+ +M+ R P +V + L+S + + + + L QM I+ D+YT+SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
++ C+ ++ A VLA M+K G +PD+VT SSL++GYC ++ A + + M M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
PD +++ +I+GL +A+ L QM PD+VTY ++++GLCK G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
L+N+M + + NV+ +++++D+LCK HV+ A+ L +M+ +GI P+V TY L++ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
C GR DA + ++L K N +V T+ +I+ K+G EA L +M PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+TY ++I D+A+++ + M+++ L
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 182/331 (54%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ C K ++DA L +M+ PD T+TTLI G + + EAV L++QMV
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ PD+ T+ +V+ LCK G + A N+L M K +VV +++++D C V
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A D+F M + P+V +Y+ +IN LC DA L M + I P+VVT+++LID
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G++ +A +L EM R + P+ ITY+ L++ C ++ +D A + K M + LP
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
++ TY L++G CK R++D E+F+++ +G + TYT +I G + G D A +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+M N D +TY I+++ L G D A
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 167/298 (56%), Gaps = 4/298 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +ID+ K+ + +A L+ EM+ + I PD +TY LI+GFC+ +L EA + MV
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P++ T++ L++ CK +V++ + M + G + VTY++++ G+ + +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ +F M + D+ +YSI+++GLC +D AL +FK + + ++ Y+++I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G+CK+G++ +AW+L S + P+V+TY++++ LC + A L +KMK G L
Sbjct: 511 EGMCKAGKVGEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
P+ TY L+ + + E+ +++ G+ D T +++ N L DG D++
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKSF 624
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 180/344 (52%), Gaps = 14/344 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ + S C ++ A Y E+L R+S D++ ++ +AV L MV
Sbjct: 30 FFNLCGSGCWERSFASASGDYREILRNRLS-DII-------------KVDDAVDLFGDMV 75
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P + F+ L+ A+ K K + ++ M G D+ TYS ++ +C ++++
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M ++ PD+ + S ++NG C K + DA+ L QM PD T+++LI
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GL + S+A LV++M RG P+++TY ++++ LCK +D A++L+ KM+ I
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+V + ++D LCK ++ A ++F ++ KG +V TY +IN LC G + +A L
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+S M + P+ VT+ +I A F+EG +AEKL +MI R +
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 196/317 (61%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I LCK++ +N A L+++M P+VVTY L++G C +G+ +A LL M+
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I P+V TF+ L+DA K GK+ EAK + VMI+ PDV TY SL++G C+ ++
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F M R P+ Y+ +I+G CK K V+D + +F +M + + + +TY+ LI
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C GR A E+ N+M SR PP++ TY+ LLD LC N V+ A+ + + M+ + +
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
++ TYTI++ G+CK G+++DA ++F L KG +V TYT MI+G C+ GL EA +L
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Query: 302 MSKMEDNGCTPDAVTYE 318
KM+++G P+ Y+
Sbjct: 491 FKKMKEDGFLPNESVYK 507
Score = 227 bits (579), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 196/345 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++++++ C + DA L+ ++L P+VVTYTTLI C L AV L NQM
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+V T++ LV LC+ G+ +A +L M+K +P+V+T+++L+D + V ++
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A++++N M +M + PDV +Y +INGLC ++D+A +F M P+ V Y++LI
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CKS R+ D ++ EM +G+ N ITY+ L+ C D A + +M +
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ TY +LLDGLC G+++ A +F+ + + ++++ TYTI+I G+CK G ++A L
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G P+ +TY +I + G +A+ L ++M G L
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 188/342 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y I+ + + NDA +L++ M+ R P ++ +T L+S + + + L QM
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I P + T +I++ +C + A L M+K G +PD+VT++SL++GYC N +
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F+ + M P+V +Y+ +I LCK + ++ A+ LF QM T P+VVTY++L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GLC+ GR DA L+ +M R + PNVIT+++L+DA K + A L M +
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV+TY L++GLC G L +A+++F + G + YT +I+G CK ++ + +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+M G + +TY ++I G D A+++ QM +R
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 185/341 (54%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++ +C A +M+ PD+VT+T+L++G+C ++++A+ L +Q++
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
P+V T++ L+ LCK + A + M G +P+VVTY++L+ G C + A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+ M + + P+V +++ +I+ K+ + +A L+ M ++ PDV TY SLI+GL
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
C G + +A ++ M G PN + Y++L+ CK+ V++ + + +M +G++ +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
TYT+L+ G C GR AQEVF + + D+RTY ++++GLC +G ++AL +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M + VTY III + + G + A L + ++G+
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 168/324 (51%)
Query: 20 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDAL 79
+L+ +M I P + T ++ C+ Q A L +M+ PD+ TF+ L++
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 80 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 139
C ++++A + ++ G KP+VVTY++L+ C +N A ++FN M P+V
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 140 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNE 199
+Y+ ++ GLC+I DA L + M I P+V+T+++LID K G++ +A EL N
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 200 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGR 259
M + P+V TY SL++ LC +D A + M+ G P+ YT L+ G CK R
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 260 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEI 319
++D ++F ++ KG + TYT++I G C G D A + ++M PD TY +
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 320 IIYALFQEGDNDKAEKLLRQMIAR 343
++ L G +KA + M R
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKR 427
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 160/298 (53%)
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
Q +A+ L +MV P + F+ L+ + K + ++ M G P + T +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
+M CL ++ +A M ++ PD+ +++ ++NG C ++DA+ LF Q+
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
P+VVTY++LI LCK+ ++ A EL N+M + G PNV+TY++L+ LC+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
L++ M + I P+V T+T L+D K G+L +A+E++ ++ DV TY +ING
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
LC GL DEA + ME NGC P+ V Y +I+ + + K+ +M +G++
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 104/177 (58%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+I CK K V D ++ EM K + + +TYT LI G+C+VG+ A + NQM
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD+ T+++L+D LC GKV++A + M K ++VTY+ ++ G C + +V
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
A D+F ++ + P+V +Y+ MI+G C+ ++ +A +LFK+M + P+ Y
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 203/345 (58%), Gaps = 4/345 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS IID LCKD +DA L+SEML K I+P+V TY +I GFC G+ +A LL M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INPDV TF+ L+ A KEGK+ EA+ + M+ PD VTY+S++ G+C N
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A+ +F+ M +PDV +++ +I+ C+ K VD+ + L +++ + + TY++L
Sbjct: 418 DDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G C+ ++ A +L EM S G+ P+ IT + LL C+N ++ A+ L + ++ I
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D Y I++ G+CKG ++ +A ++F L I G DV+TY +MI+G C +A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L KM+DNG PD TY +I + G+ DK+ +L+ +M + G
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 195/344 (56%), Gaps = 4/344 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+I+ LC + V +A L ++M+ K + DVVTY T+++G C +G K A+ LL++M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I PDV +S ++D LCK+G +A+ + + M++ G P+V TY+ ++DG+C +
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ + M E+ PDV +++ +I+ K + +A L +M I PD VTY+S+I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK R DA + + M S P+V+T+++++D C+ VD + L++++ +G++
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ TY L+ G C+ L AQ++FQ+++ G D T I++ G C++ +EAL L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ + D V Y III+ + + D+A L + G+
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 192/360 (53%), Gaps = 21/360 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA-------- 53
++ +I C ++ + + + ++ PDVVT+ TL+ G C+ ++ EA
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 54 -------VGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 106
V L +QMV + P V TF+ L++ LC EG+V EA ++ M+ G DVVT
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 107 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
Y ++++G C + + A ++ + M + PDV YS +I+ LCK DA LF +M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
+ I P+V TY+ +IDG C GR SDA L+ +M R + P+V+T+++L+ A K +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 227 NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
A L +M H+ I PD TY ++ G CK R DA+ +F DL+ DV T+ +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMASP---DVVTFNTII 439
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN-DKAEKLLRQMIARGL 345
+ C+ DE + L+ ++ G + TY +I+ F E DN + A+ L ++MI+ G+
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG-FCEVDNLNAAQDLFQEMISHGV 498
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 180/344 (52%), Gaps = 19/344 (5%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A +LY +M +RI ++ ++ LI FC +L ++ ++ PDV TF+ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 78 ALCKEGKVKEAKNVLAVMIKGGE---------------KPDVVTYSSLMDGYCLVNEVNK 122
LC E ++ EA + M++ G P V+T+++L++G CL V +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A + N M L DV +Y ++NG+CK+ ALNL +M +I PDVV YS++ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
LCK G SDA L +EM +G+ PNV TY+ ++D C +A L++ M + I P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV T+ L+ K G+L +A+++ ++L + D TY MI G CK FD+A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
M +PD VT+ II + D+ +LLR++ RGL+
Sbjct: 425 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 182/345 (52%), Gaps = 15/345 (4%)
Query: 13 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTF 72
K ++DA + + M+ R V +I F + + A+ L +M ++ I ++Y+F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN----------- 121
+IL+ C K+ + + + K G +PDVVT+++L+ G CL + ++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 122 ----KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
+A +F+ M + L P V +++ +INGLC V +A L +M + + DVVTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
++++G+CK G A L+++M + P+V+ YS+++D LCK+ H +A L +M
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
+GI P+V+TY ++DG C GR DAQ + +D++ + N DV T+ +I+ K+G E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
A L +M PD VTY +IY + D A+ + M +
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 203/345 (58%), Gaps = 4/345 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS IID LCKD +DA L+SEML K I+P+V TY +I GFC G+ +A LL M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INPDV TF+ L+ A KEGK+ EA+ + M+ PD VTY+S++ G+C N
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A+ +F+ M +PDV +++ +I+ C+ K VD+ + L +++ + + TY++L
Sbjct: 418 DDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G C+ ++ A +L EM S G+ P+ IT + LL C+N ++ A+ L + ++ I
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D Y I++ G+CKG ++ +A ++F L I G DV+TY +MI+G C +A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L KM+DNG PD TY +I + G+ DK+ +L+ +M + G
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 195/344 (56%), Gaps = 4/344 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+I+ LC + V +A L ++M+ K + DVVTY T+++G C +G K A+ LL++M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I PDV +S ++D LCK+G +A+ + + M++ G P+V TY+ ++DG+C +
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ + M E+ PDV +++ +I+ K + +A L +M I PD VTY+S+I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK R DA + + M S P+V+T+++++D C+ VD + L++++ +G++
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ TY L+ G C+ L AQ++FQ+++ G D T I++ G C++ +EAL L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ + D V Y III+ + + D+A L + G+
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 193/360 (53%), Gaps = 21/360 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA-------- 53
++ +I C ++ + + + ++ PDVVT+ TL+ G C+ ++ EA
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 54 -------VGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 106
V L +QMV + P V TF+ L++ LC EG+V EA ++ M+ G DVVT
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 107 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
Y ++++G C + + A ++ + M + PDV YS +I+ LCK DA LF +M
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
+ I P+V TY+ +IDG C GR SDA L+ +M R + P+V+T+++L+ A K +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 227 NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
A L +M H+ I PD TY ++ G CK R DA+ +F DL+ + DV T+ +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTII 439
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN-DKAEKLLRQMIARGL 345
+ C+ DE + L+ ++ G + TY +I+ F E DN + A+ L ++MI+ G+
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG-FCEVDNLNAAQDLFQEMISHGV 498
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 180/344 (52%), Gaps = 19/344 (5%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A +LY +M +RI ++ ++ LI FC +L ++ ++ PDV TF+ L+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 78 ALCKEGKVKEAKNVLAVMIKGGE---------------KPDVVTYSSLMDGYCLVNEVNK 122
LC E ++ EA + M++ G P V+T+++L++G CL V +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A + N M L DV +Y ++NG+CK+ ALNL +M +I PDVV YS++ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
LCK G SDA L +EM +G+ PNV TY+ ++D C +A L++ M + I P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV T+ L+ K G+L +A+++ ++L + D TY MI G CK FD+A +
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
M +PD VT+ II + D+ +LLR++ RGL+
Sbjct: 425 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 182/345 (52%), Gaps = 15/345 (4%)
Query: 13 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTF 72
K ++DA + + M+ R V +I F + + A+ L +M ++ I ++Y+F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN----------- 121
+IL+ C K+ + + + K G +PDVVT+++L+ G CL + ++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 122 ----KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
+A +F+ M + L P V +++ +INGLC V +A L +M + + DVVTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
++++G+CK G A L+++M + P+V+ YS+++D LCK+ H +A L +M
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
+GI P+V+TY ++DG C GR DAQ + +D++ + N DV T+ +I+ K+G E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
A L +M PD VTY +IY + D A+ + M +
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 244 bits (624), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 199/342 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+++ LCK V A + ML + PDV TY ++ISG C +G++KEAV +L+QM+
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ +P+ T++ L+ LCKE +V+EA + V+ G PDV T++SL+ G CL
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++F M PD +Y+++I+ LC +D+ALN+ KQM V+TY++LI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG CK+ + +A E+ +EM G+ N +TY++L+D LCK+ V++A L+ +M +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD YTY LL C+GG +K A ++ Q + G D+ TY +I+GLCK G + A L
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+ ++ G Y +I LF++ +A L R+M+ +
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 195/342 (57%), Gaps = 1/342 (0%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
I+ CK+ V DA N EM + PD T+ TL++G C G +K A+ +++ M+ +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
+PDVYT++ ++ LCK G+VKEA VL MI P+ VTY++L+ C N+V +A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
++ +T + PDV +++ +I GLC + A+ LF++M ++ PD TY+ LID
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
LC G++ +A ++ +M G +VITY++L+D CK + A + +M+ G+ +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
TY L+DGLCK R++DA ++ ++++G D TY ++ C+ G +A ++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M NGC PD VTY +I L + G + A KLLR + +G+
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 199/346 (57%), Gaps = 5/346 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I +LC+ + A + +M + + PD T+TT++ G+ G L A+ + QMV
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEV 120
+ + +++V CKEG+V++A N + M + G PD T+++L++G C V
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A +I + M + PDV +Y+ +I+GLCK+ V +A+ + QM T + +P+ VTY++L
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC--KNHHVDNAISLIKKMKHQ 238
I LCK ++ +A EL + S+G+ P+V T++SL+ LC +NH V A+ L ++M+ +
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV--AMELFEEMRSK 429
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G PD +TY +L+D LC G+L +A + + + + G V TY +I+G CK EA
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+ +ME +G + ++VTY +I L + + A +L+ QMI G
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 171/330 (51%), Gaps = 4/330 (1%)
Query: 19 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDA 78
+NL S+ SP+ Y ++ G + +L M TF IL+++
Sbjct: 70 FNLASK--KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIES 127
Query: 79 LCKEGKVKEAKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
+ E +V+ MI + G KPD Y+ +++ N + E M+ + P
Sbjct: 128 YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKP 187
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
DV +++++I LC+ + A+ + + M + + PD T+++++ G + G + A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPDVYTYTILLDGLCK 256
+M G + ++ + ++ CK V++A++ I++M +Q G PD YT+ L++GLCK
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 257 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
G +K A E+ +L +GY+ DV TY +I+GLCK G EA+ ++ +M C+P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 317 YEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
Y +I L +E ++A +L R + ++G+L
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGIL 397
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 205/344 (59%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I +C+ + +A++L M K +PDV++Y+T+++G+C G+L + L+ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + P+ Y + ++ LC+ K+ EA+ + MI+ G PD V Y++L+DG+C ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A F M ++ PDV +Y+ +I+G C+I + +A LF +M + + PD VT++ LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G CK+G + DA+ + N M G PNV+TY++L+D LCK +D+A L+ +M G+
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+++TY +++GLCK G +++A ++ + G N D TYT +++ CK G D+A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M G P VT+ +++ G + EKLL M+A+G+
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 198/345 (57%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+ID CK + A + EM ++ I+PDV+TYT +ISGFC +G + EA L ++M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + PD TF+ L++ CK G +K+A V MI+ G P+VVTY++L+DG C ++
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A ++ + M ++ L P++ +Y+ ++NGLCK +++A+ L + + D VTY++L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+D CKSG + A E++ EM +GL P ++T++ L++ C + +++ L+ M +GI
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ T+ L+ C LK A +++D+ +G D +TY ++ G CK EA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L +M+ G + TY ++I + +A ++ QM GL
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 198/339 (58%), Gaps = 6/339 (1%)
Query: 13 KLVNDAYNLYSEMLAKRISPDV------VTYTTLISGFCIVGQLKEAVGLLNQMVVKSIN 66
+L D Y + ++ R P+V +Y +I C +G++KEA LL M +K
Sbjct: 219 RLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 278
Query: 67 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 126
PDV ++S +V+ C+ G++ + ++ VM + G KP+ Y S++ C + ++ +AE+
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 127 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK 186
F+ M R + PD Y+ +I+G CK + A F +MH+ +ITPDV+TY+++I G C+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 187 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
G + +A +L +EM +GL P+ +T++ L++ CK H+ +A + M G P+V T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
YT L+DGLCK G L A E+ ++ G ++ TY ++NGLCK G +EA+ L+ + E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 307 DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G D VTY ++ A + G+ DKA+++L++M+ +GL
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 193/345 (55%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +II LC+ + +A +SEM+ + I PD V YTTLI GFC G ++ A +M
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I PDV T++ ++ C+ G + EA + M G +PD VT++ L++GYC +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A + N M + +P+V +Y+ +I+GLCK +D A L +M + P++ TY+S+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++GLCKSG I +A +LV E + GL + +TY++L+DA CK+ +D A ++K+M +G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P + T+ +L++G C G L+D +++ +L KG + T+ ++ C A A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ M G PD TYE ++ + + +A L ++M +G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 179/319 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ II C+ + +A L+ EM K + PD VT+T LI+G+C G +K+A + N M+
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+P+V T++ L+D LCKEG + A +L M K G +P++ TY+S+++G C +
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + L D +Y+ +++ CK +D A + K+M + + P +VT++ L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G C G + D +L+N M ++G+ PN T++SL+ C +++ A ++ K M +G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY L+ G CK +K+A +FQ++ KG+++ V TY+++I G K F EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 302 MSKMEDNGCTPDAVTYEII 320
+M G D ++
Sbjct: 689 FDQMRREGLAADKEIFDFF 707
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 139/258 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+ID LCK+ ++ A L EM + P++ TY ++++G C G ++EAV L+ +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+N D T++ L+DA CK G++ +A+ +L M+ G +P +VT++ LM+G+CL +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
E + N M +AP+ +++ ++ C + A ++K M + + PD TY +L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK+ + +AW L EM +G +V TYS L+ K A + +M+ +G+
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 242 PDVYTYTILLDGLCKGGR 259
D + D KG R
Sbjct: 699 ADKEIFDFFSDTKYKGKR 716
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN-HHVDNAISLIKKMKHQGILPDVYT 246
G + +A + +M + GL +V + + L L K+ + AI + ++ G+ +V +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
Y I++ +C+ GR+K+A + + +KGY DV +Y+ ++NG C+ G D+ L+ M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 307 DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G P++ Y II L + +AE+ +MI +G+L
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 205/344 (59%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I +C+ + +A++L M K +PDV++Y+T+++G+C G+L + L+ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + P+ Y + ++ LC+ K+ EA+ + MI+ G PD V Y++L+DG+C ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A F M ++ PDV +Y+ +I+G C+I + +A LF +M + + PD VT++ LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G CK+G + DA+ + N M G PNV+TY++L+D LCK +D+A L+ +M G+
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+++TY +++GLCK G +++A ++ + G N D TYT +++ CK G D+A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M G P VT+ +++ G + EKLL M+A+G+
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 198/345 (57%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+ID CK + A + EM ++ I+PDV+TYT +ISGFC +G + EA L ++M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + PD TF+ L++ CK G +K+A V MI+ G P+VVTY++L+DG C ++
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A ++ + M ++ L P++ +Y+ ++NGLCK +++A+ L + + D VTY++L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+D CKSG + A E++ EM +GL P ++T++ L++ C + +++ L+ M +GI
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ T+ L+ C LK A +++D+ +G D +TY ++ G CK EA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L +M+ G + TY ++I + +A ++ QM GL
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 198/339 (58%), Gaps = 6/339 (1%)
Query: 13 KLVNDAYNLYSEMLAKRISPDV------VTYTTLISGFCIVGQLKEAVGLLNQMVVKSIN 66
+L D Y + ++ R P+V +Y +I C +G++KEA LL M +K
Sbjct: 219 RLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 278
Query: 67 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 126
PDV ++S +V+ C+ G++ + ++ VM + G KP+ Y S++ C + ++ +AE+
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 127 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK 186
F+ M R + PD Y+ +I+G CK + A F +MH+ +ITPDV+TY+++I G C+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 187 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
G + +A +L +EM +GL P+ +T++ L++ CK H+ +A + M G P+V T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
YT L+DGLCK G L A E+ ++ G ++ TY ++NGLCK G +EA+ L+ + E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 307 DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G D VTY ++ A + G+ DKA+++L++M+ +GL
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 193/345 (55%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +II LC+ + +A +SEM+ + I PD V YTTLI GFC G ++ A +M
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I PDV T++ ++ C+ G + EA + M G +PD VT++ L++GYC +
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A + N M + +P+V +Y+ +I+GLCK +D A L +M + P++ TY+S+
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++GLCKSG I +A +LV E + GL + +TY++L+DA CK+ +D A ++K+M +G+
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P + T+ +L++G C G L+D +++ +L KG + T+ ++ C A A
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ M G PD TYE ++ + + +A L ++M +G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 179/319 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ II C+ + +A L+ EM K + PD VT+T LI+G+C G +K+A + N M+
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+P+V T++ L+D LCKEG + A +L M K G +P++ TY+S+++G C +
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + L D +Y+ +++ CK +D A + K+M + + P +VT++ L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G C G + D +L+N M ++G+ PN T++SL+ C +++ A ++ K M +G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY L+ G CK +K+A +FQ++ KG+++ V TY+++I G K F EA +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 302 MSKMEDNGCTPDAVTYEII 320
+M G D ++
Sbjct: 689 FDQMRREGLAADKEIFDFF 707
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 139/258 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+ID LCK+ ++ A L EM + P++ TY ++++G C G ++EAV L+ +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+N D T++ L+DA CK G++ +A+ +L M+ G +P +VT++ LM+G+CL +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
E + N M +AP+ +++ ++ C + A ++K M + + PD TY +L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK+ + +AW L EM +G +V TYS L+ K A + +M+ +G+
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698
Query: 242 PDVYTYTILLDGLCKGGR 259
D + D KG R
Sbjct: 699 ADKEIFDFFSDTKYKGKR 716
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN-HHVDNAISLIKKMKHQGILPDVYT 246
G + +A + +M + GL +V + + L L K+ + AI + ++ G+ +V +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
Y I++ +C+ GR+K+A + + +KGY DV +Y+ ++NG C+ G D+ L+ M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 307 DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G P++ Y II L + +AE+ +MI +G+L
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 186/312 (59%), Gaps = 3/312 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIID CK LVNDA L+ M + D VTY +L++G C G+ +A L+ M
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V++ I P+V TF+ ++D KEGK EA + M + PDV TY+SL++G C+ V
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ + + M PDV +Y+ +ING CK K VD+ LF++M + D +TY+++
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++GR A E+ + M SR PN+ TYS LL LC N V+ A+ L + M+ I
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D+ TY I++ G+CK G ++DA ++F+ L KG DV +YT MI+G C+ +D++
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 301 LMSKMEDNGCTP 312
L KM+++G P
Sbjct: 473 LYRKMQEDGLLP 484
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 190/324 (58%)
Query: 20 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDAL 79
+L+ +M+ R P +V ++ ++S + L + M V I D+Y+++I+++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 80 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 139
C+ + A +V+ M+K G +PDVVT SSL++G+C N V A D+ + M M PDV
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 140 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNE 199
Y+ +I+G CKI +V+DA+ LF +M + + D VTY+SL+ GLC SGR SDA L+ +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 200 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGR 259
M R + PNVIT+++++D K A+ L ++M + + PDV+TY L++GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 260 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEI 319
+ +A+++ ++ KG DV TY +ING CK DE L +M G D +TY
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 320 IIYALFQEGDNDKAEKLLRQMIAR 343
II FQ G D A+++ +M +R
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 195/344 (56%), Gaps = 3/344 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++I+ C+ V DA +L S+M PDVV Y T+I G C +G + +AV L ++M
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER 202
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ D T++ LV LC G+ +A ++ M+ P+V+T+++++D + + ++
Sbjct: 203 DGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSE 262
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++ MTR + PDV +Y+ +INGLC VD+A + M T+ PDVVTY++LI+
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G CKS R+ + +L EM RGL + ITY++++ + D A + +M + P
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---P 379
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
++ TY+ILL GLC R++ A +F+++ LD+ TY I+I+G+CK G ++A L
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G PD V+Y +I ++ DK++ L R+M GLL
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 200/376 (53%), Gaps = 32/376 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S ++ + K K + +L+ M I D+ +Y +I+ C + A+ ++ +M+
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PDV T S L++ C+ +V +A ++++ M + G +PDVV Y++++DG C + VN
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++F+ M R + D +Y+ ++ GLC DA L + M +I P+V+T++++I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K G+ S+A +L EM R + P+V TY+SL++ LC + VD A ++ M +G L
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDL--------------LIKGY------------ 275
PDV TY L++G CK R+ + ++F+++ +I+GY
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 276 ------NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
++RTY+I++ GLC + ++AL L M+ + D TY I+I+ + + G+
Sbjct: 372 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 330 NDKAEKLLRQMIARGL 345
+ A L R + +GL
Sbjct: 432 VEDAWDLFRSLSCKGL 447
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 201/360 (55%), Gaps = 15/360 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I CK+ + A +++EML ++P V+TYT+LI C G + A+ L+QM
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V+ + P+ T++ LVD ++G + EA VL M G P VVTY++L++G+C+ ++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M L+PDV SYS +++G C+ VD+AL + ++M + I PD +TYSSLI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+ R +A +L EM GLPP+ TY++L++A C ++ A+ L +M +G+L
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEV---------------FQDLLIKGYNLDVRTYTIMI 286
PDV TY++L++GL K R ++A+ + + L+ N++ ++ +I
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G C G+ EA + M PD Y I+I+ + GD KA L ++M+ G L
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 207/340 (60%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+ID CK + ++D + L M K + P++++Y +I+G C G++KE +L +M
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + D T++ L+ CKEG +A + A M++ G P V+TY+SL+ C +N
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M L P+ ++Y+ +++G + +++A + ++M+ +P VVTY++LI
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G C +G++ DA ++ +M +GL P+V++YS++L C+++ VD A+ + ++M +GI
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY+ L+ G C+ R K+A ++++++L G D TYT +IN C +G ++AL L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
++M + G PD VTY ++I L ++ +A++LL ++
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 202/345 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I C ++ A L+ +M K P+VVTY TLI G+C + ++ + LL M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+K + P++ +++++++ LC+EG++KE VL M + G D VTY++L+ GYC +
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M R L P V +Y+ +I+ +CK ++ A+ QM + P+ TY++L+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG + G +++A+ ++ EM+ G P+V+TY++L++ C +++AI++++ MK +G+
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV +Y+ +L G C+ + +A V ++++ KG D TY+ +I G C+ EA L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+M G PD TY +I A EGD +KA +L +M+ +G+L
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 196/345 (56%), Gaps = 1/345 (0%)
Query: 2 YSTIIDSLCKDKL-VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+ ++D+ + K ++ A N++ EML ++SP+V TY LI GFC G + A+ L ++M
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K P+V T++ L+D CK K+ + +L M G +P++++Y+ +++G C +
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ + M R + D +Y+ +I G CK AL + +M +TP V+TY+SL
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I +CK+G ++ A E +++M RGL PN TY++L+D + +++ A ++++M G
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P V TY L++G C G+++DA V +D+ KG + DV +Y+ +++G C+ DEAL
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M + G PD +TY +I ++ +A L +M+ GL
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 183/342 (53%), Gaps = 15/342 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I S+CK +N A +M + + P+ TYTTL+ GF G + EA +L +M
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+P V T++ L++ C GK+++A VL M + G PDVV+YS+++ G+C +V+
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M + PD +YS +I G C+ + +A +L+++M + PD TY++LI
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ C G + A +L NEM +G+ P+V+TYS L++ L K A L+ K+ ++ +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 242 PDVYTYTILLD---------------GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
P TY L++ G C G + +A +VF+ +L K + D Y IMI
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
+G C+ G +A L +M +G VT ++ AL +EG
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 192/361 (53%), Gaps = 17/361 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++D + +N+AY + EM SP VVTY LI+G C+ G++++A+ +L M
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K ++PDV ++S ++ C+ V EA V M++ G KPD +TYSSL+ G+C
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A D++ M R+ L PD +Y+ +IN C ++ AL L +M + + PDVVTYS LI
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GL K R +A L+ ++ P+ +TY +L++ C N + +SLIK +G++
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKGFCMKGMM 621
Query: 242 ----------------PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
PD Y I++ G C+ G ++ A ++++++ G+ L T +
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ L K+G +E +++ + + +A ++++ +EG+ D +L +M G
Sbjct: 682 VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 346 L 346
L
Sbjct: 742 L 742
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 75/243 (30%)
Query: 178 SSLIDGLCKS-GRIS---DAWELVNEMHSRGLPPNVITYSSLLDA--------------- 218
SS+ D + KS R+S A +V+ + G P V++Y+++LDA
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 219 ---------------------LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD----- 252
C ++D A++L KM+ +G LP+V TY L+D
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 253 ------------------------------GLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
GLC+ GR+K+ V ++ +GY+LD TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
+I G CK+G F +AL + ++M +G TP +TY +I+++ + G+ ++A + L QM
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 343 RGL 345
RGL
Sbjct: 374 RGL 376
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 15/190 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS---------------GFCI 46
YS +I+ L K +A L ++ + P VTY TLI GFC+
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 47 VGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 106
G + EA + M+ K+ PD ++I++ C+ G +++A + M+K G VT
Sbjct: 618 KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Query: 107 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
+L+ +VN+ + + R + + +++ + +D L++ +M
Sbjct: 678 VIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMA 737
Query: 167 TENITPDVVT 176
+ P+ ++
Sbjct: 738 KDGFLPNGIS 747
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 188/309 (60%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+ID LCK+ +N A L +EM K + DVVTY TL++G C G+ +A +L M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ +SINPDV TF+ L+D K+G + EA+ + MI+ P+ VTY+S+++G C+ +
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A+ F+ M P+V +Y+ +I+G CK +MVD+ + LF++M E D+ TY++L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G C+ G++ A ++ M SR + P++IT+ LL LC N +++A+ M+
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ Y I++ GLCK +++ A E+F L ++G D RTYTIMI GLCK+G EA
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477
Query: 301 LMSKMEDNG 309
L+ +M++ G
Sbjct: 478 LIRRMKEEG 486
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 186/327 (56%)
Query: 17 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILV 76
DA+ L+ EM+ + P +V +T L++ + + + + +M + I+ D+Y+F+IL+
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 77 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 136
C+ ++ A +VL M+K G +P +VT+ SL+ G+CLVN + A + M +
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 137 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWEL 196
P+V Y+ +I+GLCK ++ AL L +M + + DVVTY++L+ GLC SGR SDA +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 197 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCK 256
+ +M R + P+V+T+++L+D K ++D A L K+M + P+ TY +++GLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 257 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
GRL DA++ F + KG +V TY +I+G CK + DE + L +M G D T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 317 YEIIIYALFQEGDNDKAEKLLRQMIAR 343
Y +I+ Q G A + M++R
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 201/380 (52%), Gaps = 35/380 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I C+ ++ A ++ +M+ P +VT+ +L+ GFC+V ++ +A L+ MV
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+V ++ L+D LCK G++ A +L M K G DVVTY++L+ G C +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M + + PDV +++ +I+ K +D+A L+K+M ++ P+ VTY+S+I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GLC GR+ DA + + M S+G PNV+TY++L+ CK VD + L ++M +G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT-------------------- 281
D++TY L+ G C+ G+L+ A ++F ++ + D+ T
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 282 ---------------YTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
Y IMI+GLCK ++A L ++ G PDA TY I+I L +
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Query: 327 EGDNDKAEKLLRQMIARGLL 346
G +A++L+R+M G++
Sbjct: 469 NGPRREADELIRRMKEEGII 488
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 170/304 (55%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
IS D+ ++T LI FC +L A+ +L +M+ P + TF L+ C ++ +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
+++ +M+K G +P+VV Y++L+DG C E+N A ++ N M + L DV +Y+ ++ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
C DA + + M +I PDVVT+++LID K G + +A EL EM + PN
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
+TY+S+++ LC + + +A M +G P+V TY L+ G CK + + ++FQ
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+ +G+N D+ TY +I+G C+ G AL + M TPD +T+ I+++ L G+
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 330 NDKA 333
+ A
Sbjct: 402 IESA 405
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%)
Query: 156 DDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
+DA LF +M P +V ++ L+ R +M G+ ++ +++ L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 216 LDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
+ C+ + A+S++ KM G P + T+ LL G C R+ DA + ++ GY
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEK 335
+V Y +I+GLCK+G + AL L+++ME G D VTY ++ L G A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 336 LLRQMIARGL 345
+LR M+ R +
Sbjct: 233 MLRDMMKRSI 242
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 194/318 (61%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+I+ LCK++ +N+A ++ M K I D VTY TLISG G+ +A LL M
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + I+P+V F+ L+D KEG + EA+N+ MI+ P+V TY+SL++G+C+ +
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A+ +F+ M PDV +Y+ +I G CK K V+D + LF +M + + D TY++L
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G C++G+++ A ++ N M G+ P+++TY+ LLD LC N ++ A+ +++ ++ +
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D+ TY I++ GLC+ +LK+A +F+ L KG D Y MI+GLC+ GL EA
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 301 LMSKMEDNGCTPDAVTYE 318
L +M+++G P Y+
Sbjct: 486 LCRRMKEDGFMPSERIYD 503
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 191/330 (57%)
Query: 16 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSIL 75
+DA++L+ EML R P +V +T +++ + + + L ++M I+ D+Y+F+IL
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
+ C+ ++ A +L M+K G +P +VT SL++G+C N +A + ++M
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
P+V Y+ +INGLCK + +++AL +F M + I D VTY++LI GL SGR +DA
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
L+ +M R + PNVI +++L+D K ++ A +L K+M + ++P+V+TY L++G C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
G L DA+ +F ++ KG DV TY +I G CK ++ + L +M G DA
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
TY +I+ Q G + A+K+ +M+ G+
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 184/343 (53%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
++++ C+ +A +L M P+VV Y T+I+G C L A+ + M K
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
I D T++ L+ L G+ +A +L M+K P+V+ +++L+D + + +A
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
+++ M R + P+V +Y+ +ING C + DA +F M ++ PDVVTY++LI G
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
CKS R+ D +L EM +GL + TY++L+ C+ ++ A + +M G+ PD
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
+ TY ILLD LC G+++ A + +DL ++D+ TY I+I GLC+ EA L
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G PDA+ Y +I L ++G +A+KL R+M G +
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 192/344 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I C+ ++ A L +M+ P +VT +L++GFC + +EAV L++ M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+V ++ +++ LCK + A V M K G + D VTY++L+ G
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M + ++ P+V ++ +I+ K + +A NL+K+M ++ P+V TY+SLI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G C G + DA + + M S+G P+V+TY++L+ CK+ V++ + L +M +QG++
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D +TY L+ G C+ G+L AQ+VF ++ G + D+ TY I+++ LC +G ++AL +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ ++ + D +TY III L + +A L R + +G+
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 128/232 (55%), Gaps = 4/232 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I+ C + DA ++ M++K PDVVTY TLI+GFC ++++ + L +M
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + D +T++ L+ C+ GK+ A+ V M+ G PD+VTY+ L+D C ++
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + + + E+ D+ +Y+I+I GLC+ + +A LF+ + + + PD + Y ++I
Sbjct: 412 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
GLC+ G +A +L M G P+ Y L ++H+ + LIK
Sbjct: 472 SGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIK 519
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 35/298 (11%)
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
K +A ++ M++ P +V ++ ++ +N+ + +++ M + ++ D+ S++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
I+I+ C+ + AL L +M P +VT SL++G C+ R +A LV+ M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
G PNV+ Y+++++ LCKN ++NA+ + M+ +GI D TY L+ GL GR DA
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 264 QEVFQDL------------------------LIKGYNL-----------DVRTYTIMING 288
+ +D+ L++ NL +V TY +ING
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
C G +A + M GC PD VTY +I + + KL +M +GL+
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 210/345 (60%), Gaps = 1/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +I+ LCK + A NL ++M +I DVV Y T+I G C + +A L N+M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I PDV+T++ L+ LC G+ +A +L+ M++ PD+V +++L+D + ++
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 122 KAEDIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+AE +++ M + + PDV +Y+ +I G CK K V++ + +F++M + + VTY++L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++ +A + +M S G+ P+++TY+ LLD LC N +V+ A+ + + M+ + +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D+ TYT +++ LCK G+++D ++F L +KG +V TYT M++G C+ GL +EA A
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L +M+++G P++ TY +I A ++GD + +L+++M + G
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 201/336 (59%), Gaps = 6/336 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIID LCK K ++DA++L+++M K I PDV TY LIS C G+ +A LL+ M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNE 119
+ K+INPD+ F+ L+DA KEGK+ EA+ + M+K PDVV Y++L+ G+C
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
V + ++F M++ L + +Y+ +I+G + + D+A +FKQM ++ + PD++TY+
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+DGLC +G + A + M R + +++TY+++++ALCK V++ L + +G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ P+V TYT ++ G C+ G ++A +F ++ G + TY +I +DG DEA
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG--DEAA 549
Query: 300 A--LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+ L+ +M G DA T+ ++ L +G DK+
Sbjct: 550 SAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKS 584
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 188/337 (55%), Gaps = 1/337 (0%)
Query: 11 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVY 70
+D ++DA L+ +M+ R P +V ++ L+S + + + L QM I+ ++Y
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
T+SI ++ C+ ++ A +L M+K G P +VT +SL++G+C N +++A + + M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
M PD +++ +++GL + +A+ L ++M + PD+VTY ++I+GLCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 191 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL 250
A L+N+M + +V+ Y++++D LCK H+D+A L KM+ +GI PDV+TY L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 251 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM-EDNG 309
+ LC GR DA + D+L K N D+ + +I+ K+G EA L +M +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 310 CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
C PD V Y +I + ++ ++ R+M RGL+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 188/345 (54%), Gaps = 1/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S ++ ++ K + +L +M IS ++ TY+ I+ FC QL A+ +L +M+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P + T + L++ C ++ EA ++ M++ G +PD VT+++L+ G N+ +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M PD+ +Y +INGLCK D ALNL +M I DVV Y+++I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLCK + DA++L N+M ++G+ P+V TY+ L+ LC +A L+ M + I
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMINGLCKDGLFDEALA 300
PD+ + L+D K G+L +A++++ +++ + DV Y +I G CK +E +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M G + VTY +I+ FQ D D A+ + +QM++ G+
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 204/344 (59%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ C+ ++ A L +M+ PD+VT +L++GFC ++ +AV L++QMV
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD TF+ L+ L K EA ++ M++ G +PD+VTY ++++G C + +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ N M ++ +V YS +I+ LCK + DDALNLF +M + + P+V+TYSSLI
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC GR SDA L+++M R + PN++T+S+L+DA K + A L ++M + I
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+++TY+ L++G C RL +A+++ + ++ K +V TY +ING CK D+ + L
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G + VTY +I+ FQ D D A+ + +QM++ G+
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 173/261 (66%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YST+IDSLCK + +DA NL++EM K + P+V+TY++LIS C G+ +A LL+ M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INP++ TFS L+DA K+GK+ +A+ + MIK P++ TYSSL++G+C+++ +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A+ + M R + P+V +Y+ +ING CK K VD + LF++M + + VTY++L
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++ +A + +M S G+ PN++TY+ LLD LCKN + A+ + + ++ +
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 241 LPDVYTYTILLDGLCKGGRLK 261
PD+YTY I+++G+CK G+ K
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWK 515
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 171/292 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +++ LCK + A NL ++M A +I +VV Y+T+I C +A+ L +M
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + P+V T+S L+ LC G+ +A +L+ MI+ P++VT+S+L+D + ++
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KAE ++ M + + P++ +YS +ING C + + +A + + M ++ P+VVTY++LI
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G CK+ R+ EL EM RGL N +TY++L+ + DNA + K+M G+
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
P++ TY ILLDGLCK G+L A VF+ L D+ TY IMI G+CK G
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 177/331 (53%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+++++ C ++DA L +M+ PD VT+TTLI G + + EAV L+++MV
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ PD+ T+ +V+ LCK G A N+L M + +VV YS+++D C +
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F M + P+V +YS +I+ LC DA L M I P++VT+S+LID
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K G++ A +L EM R + PN+ TYSSL++ C + A +++ M + LP
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+V TY L++G CK R+ E+F+++ +G + TYT +I+G + D A +
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+M G P+ +TY I++ L + G KA
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 179/317 (56%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
IS ++ TY LI+ FC +L A+ LL +M+ PD+ T + L++ C ++ +A
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
++ M++ G KPD VT+++L+ G L N+ ++A + + M + PD+ +Y ++NGL
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
CK D ALNL +M I +VV YS++ID LCK DA L EM ++G+ PNV
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
ITYSSL+ LC +A L+ M + I P++ T++ L+D K G+L A++++++
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
++ + + ++ TY+ +ING C EA ++ M C P+ VTY +I +
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 330 NDKAEKLLRQMIARGLL 346
DK +L R+M RGL+
Sbjct: 409 VDKGMELFREMSQRGLV 425
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 182/327 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+I L ++A L M+ + PD+VTY +++G C G A+ LLN+M
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 245
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I +V +S ++D+LCK +A N+ M G +P+V+TYSSL+ C +
Sbjct: 246 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS 305
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + + M ++ P++ ++S +I+ K + A L+++M +I P++ TYSSLI
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G C R+ +A +++ M + PNV+TY++L++ CK VD + L ++M +G++
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ TYT L+ G + +AQ VF+ ++ G + ++ TY I+++GLCK+G +A+ +
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 485
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEG 328
++ + PD TY I+I + + G
Sbjct: 486 FEYLQRSTMEPDIYTYNIMIEGMCKAG 512
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 196/342 (57%), Gaps = 1/342 (0%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
I+ +LC++ LVN A + +M+ P+++ +T+LI G C G +K+A +L +MV
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKA 123
P+VYT + L+D LCK G ++A + +++ KP+V TY+S++ GYC +++N+A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
E +F+ M L P+V +Y+ +ING CK A L M E P++ TY++ ID
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
LCK R +A+EL+N+ S GL + +TY+ L+ CK + ++ A++ +M G D
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
+ IL+ C+ ++K+++ +FQ ++ G TYT MI+ CK+G D AL
Sbjct: 498 MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFH 557
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M+ +GC PD+ TY +I L ++ D+A KL MI RGL
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 179/334 (53%), Gaps = 1/334 (0%)
Query: 14 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFS 73
L+ A N++ EM + + PD +Y ++ G G+++EA L M+ + PD T +
Sbjct: 197 LIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCT 256
Query: 74 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 133
+++ ALC+ G V A MI G KP+++ ++SL+DG C + +A ++ M R
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
Query: 134 ELAPDVQSYSIMINGLCKIKMVDDALNLF-KQMHTENITPDVVTYSSLIDGLCKSGRISD 192
P+V +++ +I+GLCK + A LF K + ++ P+V TY+S+I G CK +++
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
A L + M +GL PNV TY++L++ CK A L+ M +G +P++YTY +D
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
LCK R +A E+ G D TYTI+I CK ++ALA +M G
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 313 DAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
D I+I A ++ ++E+L + +++ GL+
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 174/332 (52%), Gaps = 1/332 (0%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+N+A + +M + ++P +T ++ +G ++ A + ++M V+ + PD ++ +
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
+V ++GK++EA L MI+ G PD T + ++ C VN+A F M +
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
P++ +++ +I+GLCK + A + ++M P+V T+++LIDGLCK G A+
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 195 ELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDG 253
L ++ S PNV TY+S++ CK ++ A L +MK QG+ P+V TYT L++G
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 254 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPD 313
CK G A E+ + +G+ ++ TY I+ LCK EA L++K G D
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Query: 314 AVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
VTY I+I ++ D ++A +M G
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 167/307 (54%), Gaps = 1/307 (0%)
Query: 40 LISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 99
++ F +G+L EAVG++ M + + P T + +++ + G ++ A+NV M G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 100 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 159
PD +Y ++ G ++ +A+ M + PD + ++++ LC+ +V+ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 160 NLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
F++M P+++ ++SLIDGLCK G I A+E++ EM G PNV T+++L+D L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 220 CKNHHVDNAISLIKKM-KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
CK + A L K+ + P+V+TYT ++ G CK +L A+ +F + +G +
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
V TYT +ING CK G F A LM+ M D G P+ TY I +L ++ +A +LL
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 339 QMIARGL 345
+ + GL
Sbjct: 453 KAFSCGL 459
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 168/344 (48%), Gaps = 4/344 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I CK+ +N A L+S M + + P+V TYTTLI+G C G A L+N M
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P++YT++ +D+LCK+ + EA +L G + D VTY+ L+ C N++N
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A F M + D++ +I+I C+ K + ++ LF+ + + + P TY+S+I
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
CK G I A + + M G P+ TY SL+ LCK VD A L + M +G+
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P T L CK +A + + L K L +RT ++ LC + A
Sbjct: 601 PPEVTRVTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALF 657
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
K+ + + D VT A + G N+ L + I+RG+
Sbjct: 658 FQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTER-ISRGV 700
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 227 bits (579), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 201/345 (58%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I++ C+D V A L EM + +PDVVTY L++G C G+L EA+ LN M
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+V T +I++ ++C G+ +A+ +LA M++ G P VVT++ L++ C +
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG 361
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A DI M + P+ SY+ +++G CK K +D A+ ++M + PD+VTY++++
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LCK G++ DA E++N++ S+G P +ITY++++D L K AI L+ +M+ + +
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY+ L+ GL + G++ +A + F + G + T+ ++ GLCK D A+
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDF 541
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ M + GC P+ +Y I+I L EG +A +LL ++ +GL+
Sbjct: 542 LVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 199/343 (58%), Gaps = 3/343 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+T+I C+ A + + PDV+TY +ISG+C G++ A+ +L++M
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-- 198
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
S++PDV T++ ++ +LC GK+K+A VL M++ PDV+TY+ L++ C + V
Sbjct: 199 -SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A + + M PDV +Y++++NG+CK +D+A+ M + P+V+T++ ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
+C +GR DA +L+ +M +G P+V+T++ L++ LC+ + AI +++KM G P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+ +Y LL G CK ++ A E + ++ +G D+ TY M+ LCKDG ++A+ ++
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+++ GC+P +TY +I L + G KA KLL +M A+ L
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 193/343 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+TI+ SLC + A + ML + PDV+TYT LI C + A+ LL++M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PDV T+++LV+ +CKEG++ EA L M G +P+V+T++ ++ C
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
AE + M R +P V +++I+IN LC+ ++ A+++ ++M P+ ++Y+ L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK ++ A E + M SRG P+++TY+++L ALCK+ V++A+ ++ ++ +G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P + TY ++DGL K G+ A ++ ++ K D TY+ ++ GL ++G DEA+
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+ E G P+AVT+ I+ L + D+A L MI RG
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 174/298 (58%), Gaps = 3/298 (1%)
Query: 47 VGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 106
G+L+E L MV PD+ + L+ C+ GK ++A +L ++ G PDV+T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 107 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
Y+ ++ GYC E+N A + + RM ++PDV +Y+ ++ LC + A+ + +M
Sbjct: 175 YNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
+ PDV+TY+ LI+ C+ + A +L++EM RG P+V+TY+ L++ +CK +D
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 227 NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
AI + M G P+V T+ I+L +C GR DA+++ D+L KG++ V T+ I+I
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
N LC+ GL A+ ++ KM +GC P++++Y +++ +E D+A + L +M++RG
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 192/344 (55%), Gaps = 3/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I CK +N+A ++ M +SPDVVTY T++ C G+LK+A+ +L++M+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PDV T++IL++A C++ V A +L M G PDVVTY+ L++G C ++
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A N M P+V +++I++ +C DA L M + +P VVT++ LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ LC+ G + A +++ +M G PN ++Y+ LL CK +D AI +++M +G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ TY +L LCK G+++DA E+ L KG + + TY +I+GL K G +A+ L
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M PD +TY ++ L +EG D+A K + G+
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 187/330 (56%), Gaps = 3/330 (0%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+ + + M+ PD++ TTLI GFC +G+ ++A +L + PDV T+++
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
++ CK G E N L+V+ + PDVVTY++++ C ++ +A ++ + M + +
Sbjct: 178 MISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
PDV +Y+I+I C+ V A+ L +M TPDVVTY+ L++G+CK GR+ +A
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
+ +N+M S G PNVIT++ +L ++C +A L+ M +G P V T+ IL++ L
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
C+ G L A ++ + + G + +Y +++G CK+ D A+ + +M GC PD
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
VTY ++ AL ++G + A ++L Q+ ++G
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 216 LDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
L + + ++ ++ M + G +PD+ T L+ G C+ G+ + A ++ + L G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEK 335
DV TY +MI+G CK G + AL+++ +M +PD VTY I+ +L G +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 336 LLRQMIAR 343
+L +M+ R
Sbjct: 226 VLDRMLQR 233
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 197/344 (57%), Gaps = 1/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I SLC + ++A NL EM I P++ TYT LI C + ++A LL QM+
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + P+V T++ L++ CK G +++A +V+ +M P+ TY+ L+ GYC N V+
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VH 444
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + N M ++ PDV +Y+ +I+G C+ D A L M+ + PD TY+S+I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D LCKS R+ +A +L + + +G+ PNV+ Y++L+D CK VD A +++KM + L
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ T+ L+ GLC G+LK+A + + ++ G V T TI+I+ L KDG FD A +
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M +G PDA TY I +EG AE ++ +M G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 193/343 (56%), Gaps = 1/343 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +IDSLC A L +ML K + P+V+TY LI+G+C G +++AV ++ M
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ ++P+ T++ L+ CK V +A VL M++ PDVVTY+SL+DG C +
Sbjct: 421 SRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + + M L PD +Y+ MI+ LCK K V++A +LF + + + P+VV Y++LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG CK+G++ +A ++ +M S+ PN +T+++L+ LC + + A L +KM G+
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P V T TIL+ L K G A FQ +L G D TYT I C++G +A +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
M+KM +NG +PD TY +I G + A +L++M G
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 197/344 (57%), Gaps = 1/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+++SL + LV++ +Y EML ++ P++ TY +++G+C +G ++EA ++++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++PD +T++ L+ C+ + A V M G + + V Y+ L+ G C+ ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A D+F M E P V++Y+++I LC + +ALNL K+M I P++ TY+ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D LC + A EL+ +M +GL PNVITY++L++ CK +++A+ +++ M+ + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ TY L+ G CK + A V +L + DV TY +I+G C+ G FD A L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+S M D G PD TY +I +L + ++A L + +G+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 187/325 (57%), Gaps = 1/325 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ CK ++ DA ++ M ++++SP+ TY LI G+C + +A+G+LN+M+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKML 454
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + PDV T++ L+D C+ G A +L++M G PD TY+S++D C V
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A D+F+++ + + P+V Y+ +I+G CK VD+A + ++M ++N P+ +T+++LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GLC G++ +A L +M GL P V T + L+ L K+ D+A S ++M G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD +TYT + C+ GRL DA+++ + G + D+ TY+ +I G G + A +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQ 326
+ +M D GC P T+ +I L +
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 180/310 (58%), Gaps = 1/310 (0%)
Query: 37 YTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 96
Y TL++ G + E + +M+ + P++YT++ +V+ CK G V+EA ++ ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 97 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 156
+ G PD TY+SL+ GYC +++ A +FN M + +Y+ +I+GLC + +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 157 DALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 216
+A++LF +M + P V TY+ LI LC S R S+A LV EM G+ PN+ TY+ L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 217 DALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 276
D+LC + A L+ +M +G++P+V TY L++G CK G ++DA +V + + + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
+ RTY +I G CK + +A+ +++KM + PD VTY +I + G+ D A +L
Sbjct: 426 PNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 337 LRQMIARGLL 346
L M RGL+
Sbjct: 485 LSLMNDRGLV 494
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 180/375 (48%), Gaps = 54/375 (14%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA------- 53
MY+ +ID CK V++A+ + +ML+K P+ +T+ LI G C G+LKEA
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 54 --VGL--------------------------LNQMVVKSINPDVYTFSILVDALCKEGKV 85
+GL QM+ PD +T++ + C+EG++
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 86 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 145
+A++++A M + G PD+ TYSSL+ GY + + N A D+ M P ++ +
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 146 INGLCKIKM------------------VDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
I L ++K D + L ++M ++TP+ +Y LI G+C+
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 188 GRISDAWELVNEMH-SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
G + A ++ + M + G+ P+ + +++LL CK + A ++ M G LP + +
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
+L+ GL K G + VFQ+LL GY D + I+I+G+ K GL + L + ME
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Query: 307 DNGCTPDAVTYEIII 321
NGC + TY ++I
Sbjct: 894 KNGCKFSSQTYSLLI 908
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 192/341 (56%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++++LCKD + S++ K + PD+VTY TLIS + G ++EA L+N M K
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+P VYT++ +++ LCK GK + AK V A M++ G PD TY SL+ C +V + E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+F+ M ++ PD+ +S M++ + +D AL F + + PD V Y+ LI G
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
C+ G IS A L NEM +G +V+TY+++L LCK + A L +M + + PD
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
YT TIL+DG CK G L++A E+FQ + K LDV TY +++G K G D A + +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M P ++Y I++ AL +G +A ++ +MI++ +
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 186/315 (59%), Gaps = 2/315 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I C+ +++ A NL +EML + + DVVTY T++ G C L EA L N+M
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+++ PD YT +IL+D CK G ++ A + M + + DVVTY++L+DG+ V ++
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A++I+ M E+ P SYSI++N LC + +A ++ +M ++NI P V+ +S+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-- 238
I G C+SG SD + +M S G P+ I+Y++L+ + ++ A L+KKM+ +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G++PDV+TY +L G C+ ++K+A+ V + ++ +G N D TYT MING EA
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 299 LALMSKMEDNGCTPD 313
+ +M G +PD
Sbjct: 712 FRIHDEMLQRGFSPD 726
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 193/346 (55%), Gaps = 2/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +++ CK V + ++S+M ++ + PD+V +++++S F G L +A+ N +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD ++IL+ C++G + A N+ M++ G DVVTY++++ G C +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A+ +FN MT L PD + +I+I+G CK+ + +A+ LF++M + I DVVTY++L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG K G I A E+ +M S+ + P I+YS L++ALC H+ A + +M + I
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P V ++ G C+ G D + + ++ +G+ D +Y +I G ++ +A L
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 302 MSKMED--NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ KME+ G PD TY I++ ++ +AE +LR+MI RG+
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 189/340 (55%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ +I + + + + +A+ ++ + +K + + LI +G ++ A G+ ++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ +VYT +I+V+ALCK+GK+++ L+ + + G PD+VTY++L+ Y +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A ++ N M +P V +Y+ +INGLCK + A +F +M ++PD TY SL
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ CK G + + ++ ++M SR + P+++ +SS++ ++ ++D A+ +K G+
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+PD YTIL+ G C+ G + A + ++L +G +DV TY +++GLCK + EA
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L ++M + PD+ T I+I + G+ A +L ++M
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 182/344 (52%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +I SL + V A+ +Y E+ + +V T +++ C G++++ L+Q+
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K + PD+ T++ L+ A +G ++EA ++ M G P V TY+++++G C + +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A+++F M R L+PD +Y ++ CK V + +F M + ++ PD+V +SS++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
+SG + A N + GL P+ + Y+ L+ C+ + A++L +M QG
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV TY +L GLCK L +A ++F ++ + D T TI+I+G CK G A+ L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
KM++ D VTY ++ + GD D A+++ M+++ +L
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 145/293 (49%), Gaps = 17/293 (5%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIK--GGEKPDVV-----TYSS----------LMDG 113
+ S ++ L + G++ +A++ L MI+ G + ++V T+S+ L+
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 114 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
Y ++ +A + F + + + + +I L +I V+ A +++++ + +
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
V T + +++ LCK G++ ++++ +G+ P+++TY++L+ A ++ A L+
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
M +G P VYTY +++GLCK G+ + A+EVF ++L G + D TY ++ CK G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 294 LFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
E + S M PD V + ++ + G+ DKA + GL+
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 52/233 (22%)
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAW---------------ELVNE---------- 199
H N ++ S++I L +SGR+SDA E+VN
Sbjct: 104 FHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGS 163
Query: 200 ---------------------------MHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
+ S+G ++ ++L+ +L + V+ A +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 233 KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
+++ G+ +VYT I+++ LCK G+++ + KG D+ TY +I+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 293 GLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
GL +EA LM+ M G +P TY +I L + G ++A+++ +M+ GL
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 203/347 (58%), Gaps = 1/347 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+++T+I ++DA + S+M+ I PDV TY +LI G+ G + A+ +L+
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M K P+VY+++ILVD CK GK+ EA NVL M G KP+ V ++ L+ +C +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ +A +IF M R PDV +++ +I+GLC++ + AL L + M +E + + VTY++
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LI+ + G I +A +LVNEM +G P + ITY+SL+ LC+ VD A SL +KM G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
P + IL++GLC+ G +++A E ++++++G D+ T+ +INGLC+ G ++ L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ K++ G PD VT+ ++ L + G A LL + I G +
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 193/345 (55%), Gaps = 5/345 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y T+I SL K VN+A L EM PD T+ +I G C ++ EA ++N+M
Sbjct: 254 IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+++ PD T+ L++ LCK G+V AK++ + KP++V +++L+ G+ +
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRL 369
Query: 121 NKAEDIFNTM-TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ A+ + + M T + PDV +Y+ +I G K +V AL + M + P+V +Y+
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+DG CK G+I +A+ ++NEM + GL PN + ++ L+ A CK H + A+ + ++M +G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
PDVYT+ L+ GLC+ +K A + +D++ +G + TY +IN + G EA
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L+++M G D +TY +I L + G+ DKA L +M+ G
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 184/331 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I K+ LV A + +M K P+V +YT L+ GFC +G++ EA +LN+M
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+ F+ L+ A CKE ++ EA + M + G KPDV T++SL+ G C V+E+
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M + + +Y+ +IN + + +A L +M + D +TY+SLI
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GLC++G + A L +M G P+ I+ + L++ LC++ V+ A+ K+M +G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ T+ L++GLC+ GR++D +F+ L +G D T+ +++ LCK G +A L
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
+ + ++G P+ T+ I++ ++ + D+
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 188/346 (54%), Gaps = 5/346 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++ L A N++ +ML+++I P + T+ ++ FC V ++ A+ LL M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+ + L+ +L K +V EA +L M G PD T++ ++ G C + +N
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + N M APD +Y ++NGLCKI VD A +LF ++ P++V +++LI
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLI 360
Query: 182 DGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
G GR+ DA ++++M S G+ P+V TY+SL+ K V A+ ++ M+++G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+VY+YTIL+DG CK G++ +A V ++ G + + +I+ CK+ EA+
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ +M GC PD T+ +I L + + A LLR MI+ G++
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 150/291 (51%), Gaps = 5/291 (1%)
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
+L V S P +++++++ L K A NV M+ P + T+ +M +C
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
VNE++ A + MT+ P+ Y +I+ L K V++AL L ++M PD
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
T++ +I GLCK RI++A ++VN M RG P+ ITY L++ LCK VD A L ++
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGL 294
P++ + L+ G GRL DA+ V D++ G DV TY +I G K+GL
Sbjct: 349 PK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 295 FDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
AL ++ M + GC P+ +Y I++ + G D+A +L +M A GL
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 207/378 (54%), Gaps = 35/378 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I +LC L++ A+NL+ EM+ + P+V TYT LI G C G+++EA G+ +MV
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I P V T++ L++ CK+G+V A +L VM K KP+V T++ LM+G C V +
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + M L+PD+ SY+++I+GLC+ ++ A L M+ +I PD +T++++I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK-------------------- 221
+ CK G+ A + M +G+ + +T ++L+D +CK
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Query: 222 ---------------NHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
V ++++ K+ G++P V TYT L+DGL + G + + +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+ + + G +V YTI+INGLC+ G +EA L+S M+D+G +P+ VTY +++
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 327 EGDNDKAEKLLRQMIARG 344
G D+A + +R M+ RG
Sbjct: 664 NGKLDRALETVRAMVERG 681
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 207/379 (54%), Gaps = 35/379 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I LC+ + +A+ L +M K P TYT LI C G + +A L ++M+
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+V+T+++L+D LC++GK++EA V M+K P V+TY++L++GYC V
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ M + P+V++++ ++ GLC++ A++L K+M ++PD+V+Y+ LI
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLC+ G ++ A++L++ M+ + P+ +T++++++A CK D A + + M +GI
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQ------------------DLLIKGYNL------ 277
D T T L+DG+CK G+ +DA + + D+L KG +
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 278 -----------DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
V TYT +++GL + G + ++ M+ +GC P+ Y III L Q
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Query: 327 EGDNDKAEKLLRQMIARGL 345
G ++AEKLL M G+
Sbjct: 629 FGRVEEAEKLLSAMQDSGV 647
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 194/381 (50%), Gaps = 38/381 (9%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRIS--PDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++++ C+ + DA ++ ++++K ++ P+ V+Y+ LI G C VG+L+EA GL +QM
Sbjct: 234 TSLLLGFCRGLNLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM 292
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K P T+++L+ ALC G + +A N+ MI G KP+V TY+ L+DG C ++
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A + M + + P V +Y+ +ING CK V A L M P+V T++ L
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++GLC+ G+ A L+ M GL P++++Y+ L+D LC+ H++ A L+ M I
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK-----DGLF 295
PD T+T +++ CK G+ A +L KG +LD T T +I+G+CK D LF
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 296 ------------------------------DEALALMSKMEDNGCTPDAVTYEIIIYALF 325
E LA++ K+ G P VTY ++ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 326 QEGDNDKAEKLLRQMIARGLL 346
+ GD + ++L M G L
Sbjct: 593 RSGDITGSFRILELMKLSGCL 613
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 190/346 (54%), Gaps = 1/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y TI+++LCK+ A S++L D T+L+ GFC L++A+ + + M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 62 VK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + P+ ++SIL+ LC+ G+++EA + M + G +P TY+ L+ C +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+KA ++F+ M P+V +Y+++I+GLC+ +++A + ++M + I P V+TY++L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+G CK GR+ A+EL+ M R PNV T++ L++ LC+ A+ L+K+M G+
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD+ +Y +L+DGLC+ G + A ++ + D T+T +IN CK G D A A
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ M G + D VT +I + + G A +L ++ +L
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 184/345 (53%), Gaps = 1/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS+++ SL K L AY Y M A ++ Y T+++ C G + A +++++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEV 120
D + + L+ C+ +++A V VM K P+ V+YS L+ G C V +
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A + + M P ++Y+++I LC ++D A NLF +M P+V TY+ L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
IDGLC+ G+I +A + +M + P+VITY++L++ CK+ V A L+ M+ +
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+V T+ L++GLC+ G+ A + + +L G + D+ +Y ++I+GLC++G + A
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L+S M PD +T+ II A ++G D A L M+ +G+
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 190/363 (52%), Gaps = 18/363 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +++ LC+ A +L ML +SPD+V+Y LI G C G + A LL+ M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I PD TF+ +++A CK+GK A L +M++ G D VT ++L+DG C V +
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A I T+ +M + S +++++ L K V + L + +++ + P VVTY++L+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGL +SG I+ ++ ++ M G PNV Y+ +++ LC+ V+ A L+ M+ G+
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING--LCKDGLFDEAL 299
P+ TYT+++ G G+L A E + ++ +GY L+ R Y+ ++ G L + G+ +
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Query: 300 ALMSKMEDNGCTPDAVTYEI----------------IIYALFQEGDNDKAEKLLRQMIAR 343
+ +S + P+ + I ++ L +EG D++ L++ ++ R
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLER 768
Query: 344 GLL 346
G+
Sbjct: 769 GVF 771
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 52/251 (20%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++D L + + ++ + M P+V YT +I+G C G+++EA LL+ M
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV- 120
++P+ T++++V GK+ A + M++ G + + YSSL+ G+ L +
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGI 703
Query: 121 -NKAEDIFNTMTRMELAPD--------VQSYSIMINGLC--------KIKMVDDALNLF- 162
N E + + E P+ V+ I+GLC K D++ +L
Sbjct: 704 DNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQ 763
Query: 163 ----------------------KQMHTE-----------NITPDVVTYSSLIDGLCKSGR 189
K+ HT+ P ++ +I GL K G
Sbjct: 764 NVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGD 823
Query: 190 ISDAWELVNEM 200
A ELV E+
Sbjct: 824 AERARELVMEL 834
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 65/265 (24%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL----- 56
Y+ II+ LC+ V +A L S M +SP+ VTYT ++ G+ G+L A+
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 57 -----LNQMVVKSI------------NPDVYTFS-------------------------- 73
LN + S+ N + T S
Sbjct: 679 ERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCI 738
Query: 74 -----ILVDALCKEGKVKEAKNVLAVMIKGG---EKP-DVVTYSSLMDGYCLVNEVNKAE 124
LV LCKEG+ E+ +++ +++ G EK D++ M+ YC + K
Sbjct: 739 SGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDII-----MESYCSKKKHTKCM 793
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD---VVTYSSLI 181
++ + + P +S+ ++I GL K + A L ++ T N + V+TY +
Sbjct: 794 ELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECL 853
Query: 182 DGLCKSGRISDAWELVNEMHSRGLP 206
++G S+ +LV+++H R P
Sbjct: 854 MEGDETGDCSEVIDLVDQLHCRERP 878
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 190/339 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ I LC+ ++ A + ++ + PDV+TY LI G C + +EA L +MV
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + PD YT++ L+ CK G V+ A+ ++ + G PD TY SL+DG C E N
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +FN + P+V Y+ +I GL M+ +A L +M + + P+V T++ L+
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GLCK G +SDA LV M S+G P++ T++ L+ ++NA+ ++ M G+
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDVYTY LL+GLCK + +D E ++ ++ KG ++ T+ I++ LC+ DEAL L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+ +M++ PDAVT+ +I + GD D A L R+M
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 197/348 (56%), Gaps = 7/348 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I LCK+ +A +M+ + + PD TY TLI+G+C G ++ A ++ V
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD +T+ L+D LC EG+ A + + G KP+V+ Y++L+ G +
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + N M+ L P+VQ+++I++NGLCK+ V DA L K M ++ PD+ T++ LI
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G ++ +A E+++ M G+ P+V TY+SLL+ LCK ++ + K M +G
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+++T+ ILL+ LC+ +L +A + +++ K N D T+ +I+G CK+G D A L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 302 MSKMED----NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
KME+ + TP TY III+A ++ + AEKL ++M+ R L
Sbjct: 589 FRKMEEAYKVSSSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 187/339 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ LCK V + L +++ + + P++ TY I G C G+L AV ++ ++
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PDV T++ L+ LCK K +EA+ L M+ G +PD TY++L+ GYC V
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
AE I PD +Y +I+GLC + AL LF + + I P+V+ Y++LI
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GL G I +A +L NEM +GL P V T++ L++ LCK V +A L+K M +G
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD++T+ IL+ G ++++A E+ +L G + DV TY ++NGLCK F++ +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
M + GC P+ T+ I++ +L + D+A LL +M
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 194/346 (56%), Gaps = 1/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y ++ID LC + N A L++E L K I P+V+ Y TLI G G + EA L N+M
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + P+V TF+ILV+ LCK G V +A ++ VMI G PD+ T++ L+ GY ++
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +I + M + PDV +Y+ ++NGLCK +D + +K M + P++ T++ L+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GI 240
+ LC+ ++ +A L+ EM ++ + P+ +T+ +L+D CKN +D A +L +KM+ +
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
TY I++ + + A+++FQ+++ + D TY +M++G CK G +
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ +M +NG P T +I L E +A ++ +M+ +GL+
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 186/343 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T++ ++ + Y L+ +MLA +S + T+ L+ C G +KE LL++++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + P+++T+++ + LC+ G++ A ++ +I+ G KPDV+TY++L+ G C ++
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE M L PD +Y+ +I G CK MV A + PD TY SLI
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLC G + A L NE +G+ PNVI Y++L+ L + A L +M +G++
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+V T+ IL++GLCK G + DA + + ++ KGY D+ T+ I+I+G + AL +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+ M DNG PD TY ++ L + + + + M+ +G
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 181/316 (57%), Gaps = 1/316 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+I L ++ +A L +EM K + P+V T+ L++G C +G + +A GL+ M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ K PD++TF+IL+ + K++ A +L VM+ G PDV TY+SL++G C ++
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ + TM AP++ +++I++ LC+ + +D+AL L ++M +++ PD VT+ +L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 181 IDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
IDG CK+G + A+ L +M + + + TY+ ++ A + +V A L ++M +
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PD YTY +++DG CK G + + +++ G+ + T +IN LC + EA
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 300 ALMSKMEDNGCTPDAV 315
++ +M G P+AV
Sbjct: 693 GIIHRMVQKGLVPEAV 708
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 176/344 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ + S CK + A L + M ++ +VV Y T++ GF E L +M+
Sbjct: 149 FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ + TF+ L+ LCK+G VKE + +L +IK G P++ TY+ + G C E++
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + + PDV +Y+ +I GLCK +A +M E + PD TY++LI
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G CK G + A +V + G P+ TY SL+D LC + A++L + +GI
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+V Y L+ GL G + +A ++ ++ KG +V+T+ I++NGLCK G +A L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ M G PD T+ I+I+ + + A ++L M+ G+
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 174/343 (50%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ I+ L + A+ +Y M + I+PDV ++T + FC + A+ LLN M
Sbjct: 114 YNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ +V + +V +E E + M+ G + T++ L+ C +V
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ E + + + + + P++ +Y++ I GLC+ +D A+ + + + PDV+TY++LI
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GLCK+ + +A + +M + GL P+ TY++L+ CK V A ++ G +
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFV 353
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD +TY L+DGLC G A +F + L KG +V Y +I GL G+ EA L
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
++M + G P+ T+ I++ L + G A+ L++ MI++G
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 173/332 (52%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
V +A N++ M P V +Y ++S G +A + +M + I PDVY+F+I
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
+ + CK + A +L M G + +VV Y +++ G+ N + ++F M
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
++ + +++ ++ LCK V + L ++ + P++ TY+ I GLC+ G + A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
+V + +G P+VITY++L+ LCKN A + KM ++G+ PD YTY L+ G
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
CKGG ++ A+ + D + G+ D TY +I+GLC +G + ALAL ++ G P+
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ Y +I L +G +A +L +M +GL+
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 150/298 (50%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 107
G+++EAV + +M P V++++ ++ L G +A V M G PDV ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 108 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+ M +C + + A + N M+ +V +Y ++ G + + LF +M
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
++ + T++ L+ LCK G + + +L++++ RG+ PN+ TY+ + LC+ +D
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A+ ++ + QG PDV TY L+ GLCK + ++A+ ++ +G D TY +I
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G CK G+ A ++ NG PD TY +I L EG+ ++A L + + +G+
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 136/266 (51%)
Query: 81 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 140
++GKV+EA NV M +P V +Y+++M ++A ++ M + PDV
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
S++I + CK AL L M ++ +VV Y +++ G + ++ +EL +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
+ G+ + T++ LL LCK V L+ K+ +G+LP+++TY + + GLC+ G L
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
A + L+ +G DV TY +I GLCK+ F EA + KM + G PD+ TY +
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 321 IYALFQEGDNDKAEKLLRQMIARGLL 346
I + G AE+++ + G +
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFV 353
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 129
T+ +++ L GK + + VL M + G Y M Y +V +A ++F
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
M + P V SY+ +++ L D A ++ +M ITPDV +++ + CK+ R
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 190 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTI 249
A L+N M S+G NV+ Y +++ + + L KM G+ + T+
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 250 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
LL LCK G +K+ +++ ++ +G ++ TY + I GLC+ G D A+ ++ + + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 310 CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
PD +TY +IY L + +AE L +M+ GL
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 202/345 (58%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+ID CK + A +L+ EM + + TYT LI+G G K+ + +M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P++YT++ +++ LCK+G+ K+A V M + G ++VTY++L+ G C ++
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
N+A + + M + P++ +Y+ +I+G C + + AL+L + + + ++P +VTY+ L
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ G C+ G S A ++V EM RG+ P+ +TY+ L+D ++ +++ AI L M+ G+
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+PDV+TY++L+ G C G++ +A +F+ ++ K + Y MI G CK+G AL
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L+ +ME+ P+ +Y +I L +E + +AE+L+ +MI G+
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 198/346 (57%), Gaps = 1/346 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y II+S + + +N + + ++EM+ P + L++ + N+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + DVY+F IL+ C+ G+++++ ++L + + G P+VV Y++L+DG C E+
Sbjct: 156 KSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA+D+F M ++ L + ++Y+++INGL K + ++++M + + P++ TY+ +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++ LCK GR DA+++ +EM RG+ N++TY++L+ LC+ ++ A ++ +MK GI
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P++ TY L+DG C G+L A + +DL +G + + TY I+++G C+ G A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ +ME+ G P VTY I+I + + +KA +L M GL+
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 189/344 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ +I C+ + +++L E+ SP+VV YTTLI G C G++++A L +M
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + T+++L++ L K G K+ + M + G P++ TY+ +M+ C
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F+ M ++ ++ +Y+ +I GLC+ +++A + QM ++ I P+++TY++LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG C G++ A L ++ SRGL P+++TY+ L+ C+ A ++K+M+ +GI
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P TYTIL+D + ++ A ++ + G DV TY+++I+G C G +EA L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M + C P+ V Y +I +EG + +A KLL++M + L
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 168/322 (52%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ L K+ + + +Y +M + P++ TY +++ C G+ K+A + ++M
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ ++ ++ T++ L+ LC+E K+ EA V+ M G P+++TY++L+DG+C V ++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + + L+P + +Y+I+++G C+ A + K+M I P VTY+ LI
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D +S + A +L M GL P+V TYS L+ C ++ A L K M +
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ Y ++ G CK G A ++ +++ K +V +Y MI LCK+ EA L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 302 MSKMEDNGCTPDAVTYEIIIYA 323
+ KM D+G P +I A
Sbjct: 536 VEKMIDSGIDPSTSILSLISRA 557
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 1/226 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+ID C + A +L ++ ++ +SP +VTY L+SGFC G A ++ +M
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I P T++IL+D + +++A + M + G PDV TYS L+ G+C+ ++N
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F +M P+ Y+ MI G CK AL L K+M + + P+V +Y +I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ LCK + +A LV +M G+ P+ + SL+ + HV +
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPST-SILSLISRAKNDSHVSS 565
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 198/339 (58%), Gaps = 2/339 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I+ LCK+ A+ L EM+ K ISP+V++Y+TLI+ C GQ++ A L QM
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNE 119
+ + +P++YT S LV G +A ++ MI+G G +P+VV Y++L+ G+C
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ KA +F+ M + +P++++Y +ING K +D A+ ++ +M T P+VV Y++
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+++ LC+ + +A L+ M P+V T+++ + LC +D A + ++M+ Q
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 240 -ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
P++ TY LLDGL K R+++A + +++ ++G TY +++G C GL A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
L L+ KM +G +PD +T +II A ++G ++A ++L
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 179/346 (51%), Gaps = 7/346 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++ +LCK+ V+ A L EM K PD V+YTT+IS C VG +KE + +
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-----REL 238
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P V ++ L++ LCKE K A ++ M++ G P+V++YS+L++ C ++
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPDVVTYSSL 180
A M + P++ + S ++ G DAL+L+ QM + P+VV Y++L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ G C G I A + + M G PN+ TY SL++ K +D A+ + KM G
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC 418
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+V YT +++ LC+ + K+A+ + + + + V T+ I GLC G D A
Sbjct: 419 CPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEK 478
Query: 301 LMSKMED-NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +ME + C P+ VTY ++ L + ++A L R++ RG+
Sbjct: 479 VFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 172/341 (50%), Gaps = 6/341 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ ++D+L + + Y +Y +M P+V TY L+ C ++ A LL +M
Sbjct: 148 IYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM 207
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K PD +++ ++ ++C+ G VKE + + +P V Y++L++G C ++
Sbjct: 208 SNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDY 262
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A ++ M ++P+V SYS +IN LC ++ A + QM P++ T SSL
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 181 IDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+ G G DA +L N+M GL PNV+ Y++L+ C + ++ A+S+ M+ G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
P++ TY L++G K G L A ++ +L G +V YT M+ LC+ F EA
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+L+ M C P T+ I L G D AEK+ RQM
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 179/345 (51%), Gaps = 8/345 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ +I L D V+ L +M + + ++IS + VG + AV + ++
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+P V ++ ++D L E +++ V M + G +P+V TY+ L+ C N+V+
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ + M+ PD SY+ +I+ +C++ +V + L E P V Y++LI
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALI 253
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GLCK A+EL+ EM +G+ PNVI+YS+L++ LC + ++ A S + +M +G
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMINGLCKDGLFDEAL 299
P++YT + L+ G G DA +++ +I+G+ L +V Y ++ G C G +A+
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQ-MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
++ S ME+ GC+P+ TY +I + G D A + +M+ G
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 155/289 (53%), Gaps = 3/289 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ C + A +++S M SP++ TY +LI+GF G L AV + N+M+
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKML 414
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+V ++ +V+ALC+ K KEA++++ +M K P V T+++ + G C ++
Sbjct: 415 TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 474
Query: 122 KAEDIFNTMTRM-ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
AE +F M + P++ +Y+ +++GL K +++A L +++ + TY++L
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK--HQ 238
+ G C +G A +LV +M G P+ IT + ++ A CK + A ++ + +
Sbjct: 535 LHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRR 594
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
PDV +YT ++ GLC+ +D + + ++ G + T++++IN
Sbjct: 595 KWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 5/205 (2%)
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
++ +MI L VD L +QM + + S+I + G A E+ +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
G P+V Y+ +LD L + + + + MK G P+V+TY +LL LCK ++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
A+++ ++ KG D +YT +I+ +C+ GL E L + E P Y +
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNAL 252
Query: 321 IYALFQEGDNDKAEKLLRQMIARGL 345
I L +E D A +L+R+M+ +G+
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGI 277
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 158 ALNLFKQMHTENI---TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 214
AL+ FK + N+ TP +T+ +I L G++ L+ +M +G + + S
Sbjct: 59 ALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS 116
Query: 215 LLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
++ + + A+ + ++K G P V Y +LD L R++ V++D+ G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 275 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
+ +V TY +++ LCK+ D A L+ +M + GC PDAV+Y +I ++ + G
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 189/322 (58%)
Query: 24 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEG 83
E+L K PDV Y LI+GFC + ++ +A +L++M K +PD T++I++ +LC G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
K+ A VL ++ +P V+TY+ L++ L V++A + + M L PD+ +Y+
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+I G+CK MVD A + + + + PDV++Y+ L+ L G+ + +L+ +M S
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
PNV+TYS L+ LC++ ++ A++L+K MK +G+ PD Y+Y L+ C+ GRL A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
E + ++ G D+ Y ++ LCK+G D+AL + K+ + GC+P++ +Y + A
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 324 LFQEGDNDKAEKLLRQMIARGL 345
L+ GD +A ++ +M++ G+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGI 469
Score = 207 bits (527), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 184/339 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ CK ++DA + M +K SPD VTY +I C G+L A+ +LNQ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P V T++IL++A EG V EA ++ M+ G KPD+ TY++++ G C V+
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++ + PDV SY+I++ L ++ L +M +E P+VVTYS LI
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC+ G+I +A L+ M +GL P+ +Y L+ A C+ +D AI ++ M G L
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ Y +L LCK G+ A E+F L G + + +Y M + L G AL +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+ +M NG PD +TY +I L +EG D+A +LL M
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 178/302 (58%), Gaps = 1/302 (0%)
Query: 45 CIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 104
C G E++ LL MV K NPDV + L+ + +A V+ ++ K G+ PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158
Query: 105 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 164
Y++L++G+C +N ++ A + + M + +PD +Y+IMI LC +D AL + Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
+ ++N P V+TY+ LI+ G + +A +L++EM SRGL P++ TY++++ +CK
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
VD A +++ ++ +G PDV +Y ILL L G+ ++ +++ + + + +V TY+I
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+I LC+DG +EA+ L+ M++ G TPDA +Y+ +I A +EG D A + L MI+ G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 345 LL 346
L
Sbjct: 399 CL 400
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+ +L A ++ EM++ I PD +TY ++IS C G + EA LL M
Sbjct: 441 YNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+P V T++I++ CK ++++A NVL M+ G +P+ TY+ L++G
Sbjct: 501 SCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRA 560
Query: 122 KAEDIFNTMTRME 134
+A ++ N + R++
Sbjct: 561 EAMELANDLVRID 573
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 191/344 (55%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +IDSLCK + ++A L+ M + P+ VTY+ LI FC G+L A+ L +M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + VY ++ L++ CK G + A+ +A MI +P VVTY+SLM GYC ++
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
NKA +++ MT +AP + +++ +++GL + ++ DA+ LF +M N+ P+ VTY+ +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+G C+ G +S A+E + EM +G+ P+ +Y L+ LC A + +
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ YT LL G C+ G+L++A V Q+++ +G +LD+ Y ++I+G K
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L+ +M D G PD V Y +I A + GD +A + MI G
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 190/344 (55%), Gaps = 2/344 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ L K + +A NL ++ +SP++ Y LI C + EA L ++M
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ P+ T+SIL+D C+ GK+ A + L M+ G K V Y+SL++G+C +++
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
AE M +L P V +Y+ ++ G C ++ AL L+ +M + I P + T+++L+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
GL ++G I DA +L NEM + PN +TY+ +++ C+ + A +K+M +GI+P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY-NLDVRTYTIMINGLCKDGLFDEALAL 301
D Y+Y L+ GLC G+ +A+ VF D L KG L+ YT +++G C++G +EAL++
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G D V Y ++I + D LL++M RGL
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 191/346 (55%), Gaps = 2/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I+ CK ++ A +EM+ K++ P VVTYT+L+ G+C G++ +A+ L ++M
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I P +YTF+ L+ L + G +++A + M + KP+ VTY+ +++GYC +++
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + MT + PD SY +I+GLC +A +H N + + Y+ L+
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+ G++ +A + EM RG+ +++ Y L+D K+ L+K+M +G+
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD YT ++D K G K+A ++ ++ +G + TYT +INGLCK G +EA L
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQ-EGDNDKAEKLLRQMIARGLL 346
SKM+ P+ VTY + L + E D KA + L I +GLL
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE-LHNAILKGLL 784
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 194/379 (51%), Gaps = 35/379 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV-------------- 47
Y+ +ID LCK + V +A + ++ K + PDVVTY TL+ G C V
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 48 ---------------------GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVK 86
G+++EA+ L+ ++V ++P+++ ++ L+D+LCK K
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
EA+ + M K G +P+ VTYS L+D +C +++ A M L V Y+ +I
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
NG CK + A +M + + P VVTY+SL+ G C G+I+ A L +EM +G+
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P++ T+++LL L + + +A+ L +M + P+ TY ++++G C+ G + A E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+++ KG D +Y +I+GLC G EA + + C + + Y +++ +
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 327 EGDNDKAEKLLRQMIARGL 345
EG ++A + ++M+ RG+
Sbjct: 625 EGKLEEALSVCQEMVQRGV 643
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 191/380 (50%), Gaps = 35/380 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T++ L + L+ DA L++EM + P+ VTY +I G+C G + +A L +M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I PD Y++ L+ LC G+ EAK + + KG + + + Y+ L+ G+C ++
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M + + D+ Y ++I+G K K L K+MH + PD V Y+S+I
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH---- 237
D K+G +A+ + + M + G PN +TY+++++ LCK V+ A L KM+
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 238 -------------------------------QGILPDVYTYTILLDGLCKGGRLKDAQEV 266
+G+L + TY +L+ G C+ GR+++A E+
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
++ G + D TYT MIN LC+ +A+ L + M + G PD V Y +I+
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869
Query: 327 EGDNDKAEKLLRQMIARGLL 346
G+ KA +L +M+ +GL+
Sbjct: 870 AGEMGKATELRNEMLRQGLI 889
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 191/379 (50%), Gaps = 35/379 (9%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S ++ L K + A L+++M++ I PDV YT +I C + L A ++ M
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ ++ +++L+D LCK+ KV EA + + KPDVVTY +L+ G C V E
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
++ + M + +P + S ++ GL K +++ALNL K++ ++P++ Y++LID
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL- 241
LCK + +A L + M GL PN +TYS L+D C+ +D A+S + +M G+
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 242 ----------------------------------PDVYTYTILLDGLCKGGRLKDAQEVF 267
P V TYT L+ G C G++ A ++
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
++ KG + T+T +++GL + GL +A+ L ++M + P+ VTY ++I +E
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 328 GDNDKAEKLLRQMIARGLL 346
GD KA + L++M +G++
Sbjct: 556 GDMSKAFEFLKEMTEKGIV 574
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 176/345 (51%), Gaps = 1/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ +I + + V D ++ M+ K + P+V T + L+ G A+ L N M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V I PDVY ++ ++ +LC+ + AK ++A M G ++V Y+ L+DG C +V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A I + +L PDV +Y ++ GLCK++ + L + +M +P SSL
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++GL K G+I +A LV + G+ PN+ Y++L+D+LCK A L +M G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ TY+IL+D C+ G+L A +++ G L V Y +ING CK G A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M++M + P VTY ++ +G +KA +L +M +G+
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 130/244 (53%), Gaps = 4/244 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +ID K K + L EM + + PD V YT++I G KEA G+ + M+
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+ T++ +++ LCK G V EA+ + + M P+ VTY +D EV+
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVD 768
Query: 122 --KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
KA ++ N + + LA + +Y+++I G C+ +++A L +M + ++PD +TY++
Sbjct: 769 MQKAVELHNAILKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 827
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+I+ LC+ + A EL N M +G+ P+ + Y++L+ C + A L +M QG
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 240 ILPD 243
++P+
Sbjct: 888 LIPN 891
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 2/209 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+++ID+ K +A+ ++ M+ + P+ VTYT +I+G C G + EA L ++M
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNV-LAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
S P+ T+ +D L K G+V K V L I G + TY+ L+ G+C
Sbjct: 744 QPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGR 802
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ +A ++ M ++PD +Y+ MIN LC+ V A+ L+ M + I PD V Y++
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPN 208
LI G C +G + A EL NEM +GL PN
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 190/345 (55%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ I LC+D + +A ++ M + P++ TY+ +I G+C G +++A GL ++
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+V + P+V F LVD CK ++ A+++ M+K G P++ Y+ L+ G+C +
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A + + M + L+PDV +Y+I+INGLC V +A LF++M E I P TY+SL
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G CK + A +L +EM + G+ PN+IT+S+L+D C + A+ L +M +GI
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+PDV TYT L+D K +K+A ++ D+L G + + T+ +++G K+G A+
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ + V + +I L Q G +A + M + G+
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 184/345 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +ID CK V AY LY E+L + P+VV + TL+ GFC +L A L MV
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++P++Y ++ L+ CK G + EA +L+ M PDV TY+ L++G C+ ++V
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F M + P +Y+ +I+G CK ++ AL+L +M + P+++T+S+LI
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG C I A L EM +G+ P+V+TY++L+DA K ++ A+ L M GI
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ +T+ L+DG K GRL A + +Q+ + + +T +I GLC++G A
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
S M G TPD +Y ++ QE L MI G+L
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 185/342 (54%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
+I++ L + + + + Y M+++ + PDV Y L G + LL++M
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
I P+VY ++I + LC++ K++EA+ + +M K G P++ TYS+++DGYC V +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
++ + EL P+V + +++G CK + + A +LF M + P++ Y+ LI G
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
CKSG + +A L++EM S L P+V TY+ L++ LC V A L +KMK++ I P
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
TY L+ G CK ++ A ++ ++ G ++ T++ +I+G C A+ L
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G PD VTY +I A F+E + +A +L M+ G+
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 180/328 (54%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y + K L + L EM + I P+V YT I C +++EA + M
Sbjct: 201 IYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P++YT+S ++D CK G V++A + ++ P+VV + +L+DG+C E+
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A +F M + + P++ Y+ +I+G CK + +A+ L +M + N++PDV TY+ L
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+GLC ++++A L +M + + P+ TY+SL+ CK ++++ A+ L +M G+
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV 440
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P++ T++ L+DG C +K A ++ ++ IKG DV TYT +I+ K+ EAL
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEG 328
L S M + G P+ T+ ++ ++EG
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEG 528
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 173/320 (54%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ T++D CK + + A +L+ M+ + P++ Y LI G C G + EAVGLL++M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+++PDV+T++IL++ LC E +V EA + M P TY+SL+ GYC +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A D+ + MT + P++ ++S +I+G C ++ + A+ L+ +M + I PDVVTY++L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
ID K + +A L ++M G+ PN T++ L+D K + AI ++ Q
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ +T L++GLC+ G + A F D+ G D+ +Y M+ G ++ + +
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605
Query: 301 LMSKMEDNGCTPDAVTYEII 320
L M G P+ + +++
Sbjct: 606 LQCDMIKTGILPNLLVNQLL 625
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 178/346 (51%), Gaps = 3/346 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++S +I + L +A + EM + SPD ++++G + M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + + PDV+ + +L K+G + + +L M G KP+V Y+ + C N++
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+AE +F M + + P++ +YS MI+G CK V A L+K++ + P+VV + +L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+DG CK+ + A L M G+ PN+ Y+ L+ CK+ ++ A+ L+ +M+ +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PDV+TYTIL++GLC ++ +A +FQ + + TY +I+G CK+ ++AL
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
L S+M +G P+ +T+ +I D A L +M +G++
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 126/230 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I CK+ + A +L SEM A + P+++T++TLI G+C V +K A+GL +M
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+K I PDV T++ L+DA KE +KEA + + M++ G P+ T++ L+DG+ ++
Sbjct: 472 IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLS 531
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A D + + + ++ +I GLC+ + A F M + ITPD+ +Y S++
Sbjct: 532 VAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
G + RI+D L +M G+ PN++ L N +V +A L
Sbjct: 592 KGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFL 641
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 139/262 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ LC + V +A L+ +M +RI P TY +LI G+C +++A+ L ++M
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P++ TFS L+D C +K A + M G PDVVTY++L+D + +
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +++ M + P+ +++ +++G K + A++ +++ + + + V ++ LI
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GLC++G I A ++M S G+ P++ +Y S+L + + + + L M GIL
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Query: 242 PDVYTYTILLDGLCKGGRLKDA 263
P++ +L G +K A
Sbjct: 617 PNLLVNQLLARFYQANGYVKSA 638
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 121 NKAEDIFNTMTRMELAP--DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
N + +FN + ++ +P + +S++I ++ + ++AL + ++M +PD
Sbjct: 113 NMSHRLFNALEDIQ-SPKFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACL 168
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
S+++GL + R W M SRGL P+V Y L K L+ +M
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
GI P+VY YTI + LC+ ++++A+++F+ + G ++ TY+ MI+G CK G +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L ++ P+ V + ++ + + A L M+ G+
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 122 KAEDIFNTMTRMELAP--DVQSYSIMINGLCKIKMVDDALNLFKQM------HTE----- 168
+A +F T +R ++ D+QS+S +I+ L A L K + H+E
Sbjct: 56 EAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMS 115
Query: 169 ----NITPDVVT-------YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
N D+ + +S LI + G +A + EM P+ S+L+
Sbjct: 116 HRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKC---SPDSKACLSILN 172
Query: 218 ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 277
L + D+ + M +G++PDV+ Y +L K G +++ ++ G
Sbjct: 173 GLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKP 232
Query: 278 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
+V YTI I LC+D +EA + M+ +G P+ TY +I + G+ +A L
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 338 RQMIARGLL 346
++++ LL
Sbjct: 293 KEILVAELL 301
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 191/346 (55%), Gaps = 3/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T++D LCK++ +++A L EM ++ SP V Y LI G C G L L++ M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+K P+ T++ L+ LC +GK+ +A ++L M+ P+ VTY +L++G
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + ++M + YS++I+GL K ++A++L+++M + P++V YS L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLC+ G+ ++A E++N M + G PN TYSSL+ K + A+ + K+M G
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ + Y++L+DGLC GR+K+A V+ +L G D Y+ +I GLC G D AL L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 302 MSKM---EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+M E+ PD VTY I++ L + D +A LL M+ RG
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 176/347 (50%), Gaps = 4/347 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +ID LCK + L M K P+ VTY TLI G C+ G+L +AV LL +M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V P+ T+ L++ L K+ + +A +L+ M + G + YS L+ G +
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A ++ M P++ YS++++GLC+ ++A + +M P+ TYSSL
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ G K+G +A ++ EM G N YS L+D LC V A+ + KM GI
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK---GYNLDVRTYTIMINGLCKDGLFDE 297
PD Y+ ++ GLC G + A +++ ++L + DV TY I+++GLC
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN-DKAEKLLRQMIAR 343
A+ L++ M D GC PD +T + L ++ ++ DK L +++ R
Sbjct: 559 AVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 171/316 (54%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
ISP+ +++ +I C + + A+ + M + PD YT+ L+D LCKE ++ EA
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
+L M G P V Y+ L+DG C ++ + + + M P+ +Y+ +I+GL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
C +D A++L ++M + P+ VTY +LI+GL K R +DA L++ M RG N
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
YS L+ L K + A+SL +KM +G P++ Y++L+DGLC+ G+ +A+E+
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
++ G + TY+ ++ G K GL +EA+ + +M+ GC+ + Y ++I L G
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 330 NDKAEKLLRQMIARGL 345
+A + +M+ G+
Sbjct: 483 VKEAMMVWSKMLTIGI 498
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 152/245 (62%)
Query: 102 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 161
P+ ++++ ++ C + V++A ++F M + PD +Y +++GLCK + +D+A+ L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 162 FKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 221
+M +E +P V Y+ LIDGLCK G ++ +LV+ M +G PN +TY++L+ LC
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 222 NHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 281
+D A+SL+++M +P+ TY L++GL K R DA + + +GY+L+
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 282 YTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
Y+++I+GL K+G +EA++L KM + GC P+ V Y +++ L +EG ++A+++L +MI
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 342 ARGLL 346
A G L
Sbjct: 425 ASGCL 429
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 24/253 (9%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS ++D LC++ N+A + + M+A P+ TY++L+ GF G +EAV + +M
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + + +S+L+D LC G+VKEA V + M+ G KPD V YSS++ G C + +
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 121 NKAEDIFNTMTRMELA---PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
+ A +++ M E PDV +Y+I+++GLC K + A++L M PDV+T
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 178 SSLIDGL------CKSGR---------------ISDAWELVNEMHSRGLPPNVITYSSLL 216
++ ++ L C GR +S A +V M + L P T++ ++
Sbjct: 579 NTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIV 638
Query: 217 DALCKNHHVDNAI 229
+CK ++ AI
Sbjct: 639 REICKPKKINAAI 651
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 24/183 (13%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +ID LC V +A ++S+ML I PD V Y+++I G C +G + A+ L ++M+
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 62 VKS---INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD------ 112
+ PDV T++IL+D LC + + A ++L M+ G PDV+T ++ ++
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 113 -----GYCLVNE----------VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 157
G + E V+ A I M LAP ++++++ +CK K ++
Sbjct: 590 NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649
Query: 158 ALN 160
A++
Sbjct: 650 AID 652
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 186/332 (56%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++ +++ CK+ ++DA ++ E+ + + P VV++ TLI+G+C VG L E L +QM
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
PDV+T+S L++ALCKE K+ A + M K G P+ V +++L+ G+ E+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ ++ + M L PD+ Y+ ++NG CK + A N+ M + PD +TY++L
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
IDG C+ G + A E+ EM G+ + + +S+L+ +CK V +A +++M GI
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD TYT+++D CK G + ++ +++ G+ V TY +++NGLCK G A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
L+ M + G PD +TY ++ + ++ K
Sbjct: 542 LLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 189/342 (55%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++D + K + Y E+L +V + L++ FC G + +A + +++ +S
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+ P V +F+ L++ CK G + E + M K +PDV TYS+L++ C N+++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+F+ M + L P+ ++ +I+G + +D +++M ++ + PD+V Y++L++G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
CK+G + A +V+ M RGL P+ ITY++L+D C+ V+ A+ + K+M GI D
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
++ L+ G+CK GR+ DA+ +++L G D TYT+M++ CK G L+ +
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
M+ +G P VTY +++ L + G A+ LL M+ G++
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
++TY+ L G I DA + + +LLD + K +
Sbjct: 177 MITYTDL-------GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYM 229
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
++ G +VY + IL++ CK G + DAQ+VF ++ + V ++ +ING CK G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 294 LFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
DE L +ME + PD TY +I AL +E D A L +M RGL+
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 185/328 (56%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ +T+I LCK + A L+ + L K D T L+ G C G+L EA + ++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + D +++ L+ C + K+ EA L M+K G KPD TYS L+ G +N+V
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A ++ R + PDV +YS+MI+G CK + ++ F +M ++N+ P+ V Y+ L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I C+SGR+S A EL +M +G+ PN TY+SL+ + V+ A L ++M+ +G+
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+V+ YT L+DG K G++ + + +++ K + + TYT+MI G +DG EA
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEG 328
L+++M + G PD++TY+ IY ++G
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 192/345 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++++I LC + + A EML + +SP TTLISG C G+ +A+ L Q +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K D T + L+ LC+ GK+ EA + ++ G D V+Y++L+ G C +++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M + L PD +YSI+I GL + V++A+ + + PDV TYS +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG CK+ R + E +EM S+ + PN + Y+ L+ A C++ + A+ L + MKH+GI
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ TYT L+ G+ R+++A+ +F+++ ++G +V YT +I+G K G + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ +M P+ +TY ++I ++G+ +A +LL +M +G++
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 172/325 (52%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++T I++ CK V +A L+S+M ++P+VVT+ T+I G + G+ EA +M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + + P + T+SILV L + ++ +A VL M K G P+V+ Y++L+D + +
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
NKA +I + M L+ +Y+ +I G CK D+A L K+M + + +++S+
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I LC A V EM R + P ++L+ LCK+ A+ L + ++G
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ D T LL GLC+ G+L +A + +++L +G +D +Y +I+G C DEA
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALF 325
+ +M G PD TY I+I LF
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLF 586
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 175/322 (54%)
Query: 24 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEG 83
+++ K +SPDV +TT I+ FC G+++EAV L ++M + P+V TF+ ++D L G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
+ EA M++ G +P ++TYS L+ G + A + MT+ P+V Y+
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+I+ + ++ A+ + M ++ ++ TY++LI G CK+G+ +A L+ EM S
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
G N +++S++ LC + D+A+ + +M + + P T L+ GLCK G+ A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
E++ L KG+ +D RT +++GLC+ G DEA + ++ GC D V+Y +I
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 324 LFQEGDNDKAEKLLRQMIARGL 345
+ D+A L +M+ RGL
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGL 571
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 35/379 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS ++ L + K + DAY + EM K P+V+ Y LI F G L +A+ + + MV
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS------------ 109
K ++ T++ L+ CK G+ A+ +L M+ G + +++S
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 110 -----------------------LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
L+ G C + +KA +++ D ++ + ++
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
+GLC+ +D+A + K++ D V+Y++LI G C ++ +A+ ++EM RGL
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P+ TYS L+ L + V+ AI K G+LPDVYTY++++DG CK R ++ QE
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
F +++ K + Y +I C+ G AL L M+ G +P++ TY +I +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 327 EGDNDKAEKLLRQMIARGL 345
++A+ L +M GL
Sbjct: 693 ISRVEEAKLLFEEMRMEGL 711
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 153/279 (54%), Gaps = 4/279 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I C K +++A+ EM+ + + PD TY+ LI G + +++EA+ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PDVYT+S+++D CK + +E + M+ +P+ V Y+ L+ YC ++
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ M ++P+ +Y+ +I G+ I V++A LF++M E + P+V Y++LI
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG K G++ L+ EMHS+ + PN ITY+ ++ ++ +V A L+ +M+ +GI+
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 242 PDVYTYTILLDGLCKGG----RLKDAQEVFQDLLIKGYN 276
PD TY + G K G K + E +I+G+N
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWN 821
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 155/284 (54%), Gaps = 1/284 (0%)
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K + P T +IL+ +L + + ++ V+ KG PDV +++ ++ +C +V +
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEE 278
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A +F+ M +AP+V +++ +I+GL D+A ++M + P ++TYS L+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
GL ++ RI DA+ ++ EM +G PPNVI Y++L+D+ + ++ AI + M +G+
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
TY L+ G CK G+ +A+ + +++L G+N++ ++T +I LC +FD AL +
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+M +P +I L + G + KA +L Q + +G +
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 215 LLDALCKNHHVDN---AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
L++ C D A+ + + ++G+ P T ILL L + + E F D++
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 252
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
KG + DV +T IN CK G +EA+ L SKME+ G P+ VT+ +I L G D
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 332 KAEKLLRQMIARGL 345
+A +M+ RG+
Sbjct: 313 EAFMFKEKMVERGM 326
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 185/328 (56%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ +T+I LCK + A L+ + L K D T L+ G C G+L EA + ++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + D +++ L+ C + K+ EA L M+K G KPD TYS L+ G +N+V
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A ++ R + PDV +YS+MI+G CK + ++ F +M ++N+ P+ V Y+ L
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I C+SGR+S A EL +M +G+ PN TY+SL+ + V+ A L ++M+ +G+
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+V+ YT L+DG K G++ + + +++ K + + TYT+MI G +DG EA
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEG 328
L+++M + G PD++TY+ IY ++G
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 192/345 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++++I LC + + A EML + +SP TTLISG C G+ +A+ L Q +
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL 497
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K D T + L+ LC+ GK+ EA + ++ G D V+Y++L+ G C +++
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M + L PD +YSI+I GL + V++A+ + + PDV TYS +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG CK+ R + E +EM S+ + PN + Y+ L+ A C++ + A+ L + MKH+GI
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ TYT L+ G+ R+++A+ +F+++ ++G +V YT +I+G K G + L
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ +M P+ +TY ++I ++G+ +A +LL +M +G++
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 172/325 (52%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++T I++ CK V +A L+S+M ++P+VVT+ T+I G + G+ EA +M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + + P + T+SILV L + ++ +A VL M K G P+V+ Y++L+D + +
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
NKA +I + M L+ +Y+ +I G CK D+A L K+M + + +++S+
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I LC A V EM R + P ++L+ LCK+ A+ L + ++G
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ D T LL GLC+ G+L +A + +++L +G +D +Y +I+G C DEA
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALF 325
+ +M G PD TY I+I LF
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLF 586
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 175/322 (54%)
Query: 24 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEG 83
+++ K +SPDV +TT I+ FC G+++EAV L ++M + P+V TF+ ++D L G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
+ EA M++ G +P ++TYS L+ G + A + MT+ P+V Y+
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+I+ + ++ A+ + M ++ ++ TY++LI G CK+G+ +A L+ EM S
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
G N +++S++ LC + D+A+ + +M + + P T L+ GLCK G+ A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
E++ L KG+ +D RT +++GLC+ G DEA + ++ GC D V+Y +I
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 324 LFQEGDNDKAEKLLRQMIARGL 345
+ D+A L +M+ RGL
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGL 571
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 35/379 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS ++ L + K + DAY + EM K P+V+ Y LI F G L +A+ + + MV
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS------------ 109
K ++ T++ L+ CK G+ A+ +L M+ G + +++S
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 110 -----------------------LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
L+ G C + +KA +++ D ++ + ++
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
+GLC+ +D+A + K++ D V+Y++LI G C ++ +A+ ++EM RGL
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P+ TYS L+ L + V+ AI K G+LPDVYTY++++DG CK R ++ QE
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
F +++ K + Y +I C+ G AL L M+ G +P++ TY +I +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 327 EGDNDKAEKLLRQMIARGL 345
++A+ L +M GL
Sbjct: 693 ISRVEEAKLLFEEMRMEGL 711
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 153/279 (54%), Gaps = 4/279 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I C K +++A+ EM+ + + PD TY+ LI G + +++EA+ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PDVYT+S+++D CK + +E + M+ +P+ V Y+ L+ YC ++
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ M ++P+ +Y+ +I G+ I V++A LF++M E + P+V Y++LI
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG K G++ L+ EMHS+ + PN ITY+ ++ ++ +V A L+ +M+ +GI+
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 242 PDVYTYTILLDGLCKGG----RLKDAQEVFQDLLIKGYN 276
PD TY + G K G K + E +I+G+N
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWN 821
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 155/284 (54%), Gaps = 1/284 (0%)
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K + P T +IL+ +L + + ++ V+ KG PDV +++ ++ +C +V +
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEE 278
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A +F+ M +AP+V +++ +I+GL D+A ++M + P ++TYS L+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
GL ++ RI DA+ ++ EM +G PPNVI Y++L+D+ + ++ AI + M +G+
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
TY L+ G CK G+ +A+ + +++L G+N++ ++T +I LC +FD AL +
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+M +P +I L + G + KA +L Q + +G +
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 215 LLDALCKNHHVDN---AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
L++ C D A+ + + ++G+ P T ILL L + + E F D++
Sbjct: 194 LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVV 252
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
KG + DV +T IN CK G +EA+ L SKME+ G P+ VT+ +I L G D
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 332 KAEKLLRQMIARGL 345
+A +M+ RG+
Sbjct: 313 EAFMFKEKMVERGM 326
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 187/290 (64%), Gaps = 4/290 (1%)
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+M+ + I P+V+TF+++++ALCK GK+ +A++V+ M G P+VV+Y++L+DGYC +
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 119 ---EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
++ KA+ + M +++P++ +++I+I+G K + ++ +FK+M +++ P+V+
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
+Y+SLI+GLC G+IS+A + ++M S G+ PN+ITY++L++ CKN + A+ + +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
K QG +P Y +L+D CK G++ D + +++ +G DV TY +I GLC++G
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ A L ++ G PD VT+ I++ ++G++ KA LL++M GL
Sbjct: 453 EAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 201/349 (57%), Gaps = 5/349 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV---GQLKEAVGLLN 58
++ +I++LCK +N A ++ +M SP+VV+Y TLI G+C + G++ +A +L
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+MV ++P++ TF+IL+D K+ + + V M+ KP+V++Y+SL++G C
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
++++A + + M + P++ +Y+ +ING CK M+ +AL++F + + P Y+
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
LID CK G+I D + L EM G+ P+V TY+ L+ LC+N +++ A L ++ +
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G LPD+ T+ IL++G C+ G + A + +++ G TY I++ G CK+G A
Sbjct: 466 G-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 299 LALMSKME-DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ ++ME + + +Y +++ Q+G + A LL +M+ +GL+
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 194/336 (57%), Gaps = 4/336 (1%)
Query: 8 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINP 67
+L K+ D +Y EM+ ++I P+V T+ +I+ C G++ +A ++ M V +P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 68 DVYTFSILVDALCK---EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+V +++ L+D CK GK+ +A VL M++ P++ T++ L+DG+ + + +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+F M ++ P+V SY+ +INGLC + +A+++ +M + + P+++TY++LI+G
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
CK+ + +A ++ + +G P Y+ L+DA CK +D+ +L ++M+ +GI+PDV
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
TY L+ GLC+ G ++ A+++F L KG D+ T+ I++ G C+ G +A L+ +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
M G P +TY I++ +EG+ A + QM
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 156/275 (56%), Gaps = 5/275 (1%)
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L+ AL KE + + + V MI+ +P+V T++ +++ C ++NKA D+ M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 135 LAPDVQSYSIMINGLCKI----KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
+P+V SY+ +I+G CK+ KM A + K+M +++P++ T++ LIDG K +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMY-KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 191 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL 250
+ ++ EM + + PNVI+Y+SL++ LC + AIS+ KM G+ P++ TY L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 251 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 310
++G CK LK+A ++F + +G R Y ++I+ CK G D+ AL +ME G
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 311 TPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
PD TY +I L + G+ + A+KL Q+ ++GL
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 108/193 (55%), Gaps = 2/193 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+ +ID+ CK ++D + L EM + I PDV TY LI+G C G ++ A L +Q+
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + PD+ TF IL++ C++G+ ++A +L M K G KP +TY+ +M GYC +
Sbjct: 463 TSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 121 NKAEDIFNTMTR-MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
A ++ M + L +V SY++++ G + ++DA L +M + + P+ +TY
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Query: 180 LIDGLCKSGRISD 192
+ + + G + D
Sbjct: 582 VKEEMVDQGFVPD 594
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 94/177 (53%), Gaps = 3/177 (1%)
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+N+ + + L+ + R +E G + ++ L+ AL K + +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
+ K+M + I P+V+T+ ++++ LCK G++ A++V +D+ + G + +V +Y +I+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 288 GLCK---DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
G CK +G +A A++ +M +N +P+ T+ I+I +++ + + K+ ++M+
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 201/377 (53%), Gaps = 37/377 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I CK + +A ++ M+ + + P+V TYT LI G C VG+ KEA+ LLN M+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P+ T++I+++ LCK+G V +A ++ +M K +PD +TY+ L+ G C +++
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 122 KAEDIFNTMTRME--LAPDVQSYSIMINGLCKIKM------------------------- 154
+A + M + PDV SY+ +I+GLCK
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 155 ----------VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
V+ A+ L+KQ+ I + TY+++IDG CK+G ++ A L+ +M
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
L P+V Y+ LL +LCK +D A L ++M+ PDV ++ I++DG K G +K A+
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
+ + G + D+ TY+ +IN K G DEA++ KM D+G PDA + ++
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 325 FQEGDNDKAEKLLRQMI 341
+G+ DK +L+++++
Sbjct: 645 ISQGETDKLTELVKKLV 661
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 196/342 (57%), Gaps = 4/342 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ LC++ A +L EM + PDV +Y T+I GFC +L++A+ L N+M
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + T+ IL+DA CK GK+ EA L M G + D+V Y+SL+ G+C E++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + +F+ + +P +Y+ +I G CK+ + +A +F+ M + P+V TY+ LI
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLC G+ +A +L+N M + PN +TY+ +++ LCK+ V +A+ +++ MK +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL---DVRTYTIMINGLCKDGLFDEA 298
PD TY ILL GLC G L +A ++ L++K + DV +Y +I+GLCK+ +A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLY-LMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L + + + D VT I++ + + GD +KA +L +Q+
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 192/347 (55%), Gaps = 2/347 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+++I C ++ L+ E+L + SP +TY TLI GFC +GQLKEA + M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + + P+VYT++ L+D LC GK KEA +L +MI+ E+P+ VTY+ +++ C V
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN--ITPDVVTYS 178
A +I M + PD +Y+I++ GLC +D+A L M ++ PDV++Y+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+LI GLCK R+ A ++ + + + + +T + LL++ K V+ A+ L K++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
I+ + TYT ++DG CK G L A+ + + + V Y +++ LCK+G D+A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L +M+ + PD V++ I+I + GD AE LL M GL
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 179/324 (55%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A++ Y +ML + V+ + L+ + + + A G+L M+ + +VY +IL+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
LC+ + +A ++L M + PDV +Y++++ G+C E+ KA ++ N M +
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
+ ++ I+I+ CK +D+A+ K+M + D+V Y+SLI G C G + L
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
+E+ RG P ITY++L+ CK + A + + M +G+ P+VYTYT L+DGLC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTY 317
G+ K+A ++ ++ K + TY I+IN LCKDGL +A+ ++ M+ PD +TY
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 318 EIIIYALFQEGDNDKAEKLLRQMI 341
I++ L +GD D+A KLL M+
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLML 414
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 176/340 (51%), Gaps = 3/340 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ II+ LCKD LV DA + M +R PD +TY L+ G C G L EA LL M+
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 62 VKS--INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
S +PDV +++ L+ LCKE ++ +A ++ ++++ D VT + L++ +
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
VNKA +++ ++ ++ + +Y+ MI+G CK M++ A L +M + P V Y+
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ LCK G + AW L EM P+V++++ ++D K + +A SL+ M G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PD++TY+ L++ K G L +A F ++ G+ D ++ G D+
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 300 ALMSKMEDNGCTPDA-VTYEIIIYALFQEGDNDKAEKLLR 338
L+ K+ D D +T ++ Y + D A++LLR
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 149/295 (50%), Gaps = 1/295 (0%)
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
QLK AV + Q V S + + + L+ L + + A + M++ + V+ S
Sbjct: 53 QLKNAVSVFQQ-AVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
L++ Y + + A + M + A +V +++I++ GLC+ A++L ++M
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
++ PDV +Y+++I G C+ + A EL NEM G +++T+ L+DA CK +D A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
+ +K+MK G+ D+ YT L+ G C G L + +F ++L +G + TY +I G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
CK G EA + M + G P+ TY +I L G +A +LL MI +
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 13/298 (4%)
Query: 59 QMVVKSINPDVYTFSILVDALCK-EGKVK--------EAKNVLAVMIKGGEKPDVVTYS- 108
+V K +NP VY S LV+A + E K++ + KN ++V + + + ++
Sbjct: 18 HVVRKLLNPRVY--SKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAG 75
Query: 109 -SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+LM A + M + + S S ++ +++ A + M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+V ++ L+ GLC++ A L+ EM L P+V +Y++++ C+ ++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A+ L +MK G + T+ IL+D CK G++ +A +++ G D+ YT +I
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G C G D AL ++ + G +P A+TY +I + G +A ++ MI RG+
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 204 bits (518), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 151/236 (63%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ IID LCKD A NL++EM K I PDV+TY+ +I FC G+ +A LL M
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + INPDV TFS L++AL KEGKV EA+ + M++ G P +TY+S++DG+C + +
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
N A+ + ++M +PDV ++S +ING CK K VD+ + +F +MH I + VTY++L
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
I G C+ G + A +L+N M S G+ PN IT+ S+L +LC + A ++++ ++
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 182/316 (57%), Gaps = 4/316 (1%)
Query: 25 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGK 84
M+ PDVVT+TTL++G C G++ +A+ L+++MV + P + +++ LCK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 85 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
+ A N+L+ M + K VV Y++++D C A+++F M + PDV +YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
MI+ C+ DA L + M I PDVVT+S+LI+ L K G++S+A E+ +M RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ P ITY+S++D CK +++A ++ M + PDV T++ L++G CK R+ +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
E+F ++ +G + TYT +I+G C+ G D A L++ M +G P+ +T++ ++ +L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 325 FQEGDNDKAEKLLRQM 340
+ + KA +L +
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 4/286 (1%)
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
MV PDV TF+ L++ LC EG+V +A ++ M++ G +P Y ++++G C + +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
A ++ + M + V Y+ +I+ LCK A NLF +MH + I PDV+TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+ID C+SGR +DA +L+ +M R + P+V+T+S+L++AL K V A + M +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
I P TY ++DG CK RL DA+ + + K + DV T++ +ING CK D +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M G + VTY +I+ Q GD D A+ LL MI+ G+
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 166/305 (54%), Gaps = 4/305 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+++ LC + V A L M+ + P Y T+I+G C +G + A+ LL++M
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKME 68
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I V ++ ++D LCK+G A+N+ M G PDV+TYS ++D +C
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
AE + M ++ PDV ++S +IN L K V +A ++ M I P +TY+S+I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG CK R++DA +++ M S+ P+V+T+S+L++ CK VDN + + +M +GI+
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ TYT L+ G C+ G L AQ++ ++ G + T+ M+ LC +A A+
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 302 MSKME 306
+ ++
Sbjct: 309 LEDLQ 313
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 75/133 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++ID CK +NDA + M +K SPDVVT++TLI+G+C ++ + + +M
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I + T++ L+ C+ G + A+++L VMI G P+ +T+ S++ C E+
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
Query: 122 KAEDIFNTMTRME 134
KA I + + E
Sbjct: 304 KAFAILEDLQKSE 316
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 194/380 (51%), Gaps = 35/380 (9%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +ID LCK K +NDA L+ EMLA+R+ P ++TY TLI G+C G +++ + +M
Sbjct: 216 IYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM 275
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY------ 114
I P + TF+ L+ L K G V++A+NVL M G PD T+S L DGY
Sbjct: 276 KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA 335
Query: 115 -----------------------------CLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 145
C ++ KAE+I L P+ Y+ M
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Query: 146 INGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
I+G C+ + A + M + + PD + Y+ LI C+ G + +A + VN+M +G+
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P+V TY+ L+ + + D ++K+M+ G +P+V +Y L++ LCKG +L +AQ
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
V +D+ +G + VR Y ++I+G C G ++A +M G + VTY +I L
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 326 QEGDNDKAEKLLRQMIARGL 345
G +AE LL ++ +GL
Sbjct: 576 MTGKLSEAEDLLLEISRKGL 595
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 183/344 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T++ L K +V DA N+ EM PD T++ L G+ + + A+G+ V
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + YT SIL++ALCKEGK+++A+ +L + G P+ V Y++++DGYC ++
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A M + + PD +Y+ +I C++ +++A +M + ++P V TY+ LI
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G + ++++ EM G PNV++Y +L++ LCK + A + + M+ +G+
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P V Y +L+DG C G+++DA +++L KG L++ TY +I+GL G EA L
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ ++ G PD TY +I G+ + L +M G+
Sbjct: 587 LLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 177/345 (51%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY I + K V L++ M RI P V Y LI G C ++ +A L ++M
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + + P + T++ L+D CK G +++ V M +P ++T+++L+ G V
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
AE++ M + PD ++SI+ +G + + AL +++ + + T S L
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++ LCK G+I A E++ ++GL PN + Y++++D C+ + A I+ M+ QG+
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD Y L+ C+ G +++A++ + +KG + V TY I+I G + FD+
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ +MEDNG P+ V+Y +I L + +A+ + R M RG+
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 192/377 (50%), Gaps = 31/377 (8%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+ID C+ + A M + + PD + Y LI FC +G+++ A +N+M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+K ++P V T++IL+ ++ + + ++L M G P+VV+Y +L++ C +++
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A+ + M ++P V+ Y+++I+G C ++DA K+M + I ++VTY++L
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
IDGL +G++S+A +L+ E+ +GL P+V TY+SL+ +V I+L ++MK GI
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 241 LPDVYTYTILLDGLCKGG-----RLKDAQEVFQDLLI---------------KGYN---- 276
P + TY +L+ K G RL + DLL+ K +N
Sbjct: 631 KPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Query: 277 -------LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
LD TY +I G K G E +L+ +M P+A TY II+ + D
Sbjct: 691 MIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Query: 330 NDKAEKLLRQMIARGLL 346
A R+M +G L
Sbjct: 751 YMSAYVWYREMQEKGFL 767
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 161/296 (54%)
Query: 50 LKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 109
+ EA L + + I P + ++L+D L K + + NV +++ +P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 110 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 169
+ +++V K ++FN M + P V Y+++I+GLCK K ++DA LF +M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 170 ITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 229
+ P ++TY++LIDG CK+G ++++ M + + P++IT+++LL L K V++A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 230 SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
+++K+MK G +PD +T++IL DG + + A V++ + G ++ T +I++N L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 290 CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
CK+G ++A ++ + G P+ V Y +I ++GD A + M +G+
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 165/337 (48%)
Query: 9 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPD 68
L + K++++A +L+ + + I P + T L+ Q + + + ++ P
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 69 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 128
+ + + A K V + + M P V Y+ L+DG C +N AE +F+
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 129 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
M L P + +Y+ +I+G CK + + + ++M ++I P ++T+++L+ GL K+G
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
+ DA ++ EM G P+ T+S L D N + A+ + + G+ + YT +
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 308
ILL+ LCK G+++ A+E+ + KG + Y MI+G C+ G A + ME
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 309 GCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G PD + Y +I + G+ + AEK + +M +G+
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 1/274 (0%)
Query: 74 ILVDALCKEGK-VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
+L+ L E K + EA ++ + G P + + L+D + ++F +
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
+ P Y I K+ V L LF +M + I P V Y+ LIDGLCK R++D
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
A +L +EM +R L P++ITY++L+D CK + + + + ++MK I P + T+ LL
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
GL K G ++DA+ V +++ G+ D T++I+ +G + + AL + D+G
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 313 DAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+A T I++ AL +EG +KAE++L + +A+GL+
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 163/304 (53%), Gaps = 4/304 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T+I+ LCK + +A + +M + +SP V Y LI G C G++++A +M+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I ++ T++ L+D L GK+ EA+++L + + G KPDV TY+SL+ GY V
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ ++ M R + P +++Y ++I+ LC + ++ LF +M ++ PD++ Y+ ++
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVL 672
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G + A+ L +M + + + TY+SL+ K + SLI +M + +
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ TY I++ G C+ A ++++ KG+ LDV +++GL ++ EA +
Sbjct: 733 PEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIV 792
Query: 302 MSKM 305
+S+M
Sbjct: 793 ISEM 796
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 174/344 (50%), Gaps = 4/344 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I + + +++ EM P+VV+Y TLI+ C +L EA + M
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 521
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ ++P V +++L+D C +GK+++A M+K G + ++VTY++L+DG + +++
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AED+ ++R L PDV +Y+ +I+G V + L+++M I P + TY LI
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC I L EM L P+++ Y+ +L + ++ A +L K+M + I
Sbjct: 642 S-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D TY L+ G K G+L + + + ++ + + TY I++ G C+ + A
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVW 757
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M++ G D ++ L +E + +AE ++ +M R L
Sbjct: 758 YREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 106/206 (51%)
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
SY ++ L + KM+ +A +LF + E I P + + L+D L K+ + + +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
P+ Y + A K V + L +MKH I P V+ Y +L+DGLCKG R+
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
DA+++F ++L + + TY +I+G CK G +++ + +M+ + P +T+ +
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 321 IYALFQEGDNDKAEKLLRQMIARGLL 346
+ LF+ G + AE +L++M G +
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFV 316
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 199/369 (53%), Gaps = 32/369 (8%)
Query: 1 MYSTIIDSLCKDKLVNDAYNL-YSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+++++I + LV+D +L YS+M+A +SPDV LI FC VG+L A+ LL
Sbjct: 95 LWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN 154
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC---- 115
V I+ D T++ ++ LC+ G EA L+ M+K G PD V+Y++L+DG+C
Sbjct: 155 RV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 211
Query: 116 ------LVNEVNK------------------AEDIFNTMTRMELAPDVQSYSIMINGLCK 151
LV+E+++ E+ + M PDV ++S +IN LCK
Sbjct: 212 FVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 271
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
V + L ++M ++ P+ VTY++L+D L K+ A L ++M RG+P +++
Sbjct: 272 GGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVV 331
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
Y+ L+D L K + A K + +P+V TYT L+DGLCK G L A+ + +L
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
K +V TY+ MING K G+ +EA++L+ KMED P+ TY +I LF+ G +
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 332 KAEKLLRQM 340
A +L ++M
Sbjct: 452 MAIELSKEM 460
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 199/372 (53%), Gaps = 28/372 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ-- 59
Y+T+I LC+ L ++AY SEM+ I PD V+Y TLI GFC VG A L+++
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 60 --------------------------MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLA 93
MV+ +PDV TFS +++ LCK GKV E +L
Sbjct: 224 ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 94 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 153
M + P+ VTY++L+D N A +++ M + D+ Y+++++GL K
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 154 MVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 213
+ +A FK + +N P+VVTY++L+DGLCK+G +S A ++ +M + + PNV+TYS
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
S+++ K ++ A+SL++KM+ Q ++P+ +TY ++DGL K G+ + A E+ +++ +
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463
Query: 274 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
G + ++N L + G E L+ M G T D + Y +I F+ GD + A
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523
Query: 334 EKLLRQMIARGL 345
+M RG+
Sbjct: 524 LAWAEEMQERGM 535
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 191/344 (55%), Gaps = 1/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S+II+ LCK V + L EM + P+ VTYTTL+ + A+ L +QMV
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V+ I D+ +++L+D L K G ++EA+ ++++ + P+VVTY++L+DG C +++
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 381
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
AE I M + P+V +YS MING K M+++A++L ++M +N+ P+ TY ++I
Sbjct: 382 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGL K+G+ A EL EM G+ N +L++ L + + L+K M +G+
Sbjct: 442 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D YT L+D KGG + A +++ +G DV +Y ++I+G+ K G A
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY 561
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M + G PD T+ I++ + ++GD++ KL +M + G+
Sbjct: 562 -KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 604
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 166/344 (48%), Gaps = 1/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++ID K A EM + + DVV+Y LISG G++ A M
Sbjct: 507 YTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMR 565
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I PD+ TF+I++++ K+G + + M G KP +++ + ++ C ++
Sbjct: 566 EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKME 625
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I N M ME+ P++ +Y I ++ K K D + + + I Y++LI
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LCK G A ++ +M +RG P+ +T++SL+ HV A+S M GI
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+V TY ++ GL G +K+ + ++ +G D TY +I+G K G ++ +
Sbjct: 746 PNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M +G P TY ++I G +A +LL++M RG+
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 168/357 (47%), Gaps = 41/357 (11%)
Query: 28 KRISPD---------VVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDA 78
+R PD V + TL + +L A L+ M + PD ++ L+
Sbjct: 43 RRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQ 102
Query: 79 LCKEGKVKEAKNVL-AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
G V + +++ + MI G PDV + L+ +C V ++ A + ++
Sbjct: 103 FNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISI 159
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
D +Y+ +I+GLC+ + D+A +M I PD V+Y++LIDG CK G A LV
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 198 NE------------------MHS----------RGLPPNVITYSSLLDALCKNHHVDNAI 229
+E +H+ G P+V+T+SS+++ LCK V
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 230 SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
L+++M+ + P+ TYT L+D L K + A ++ ++++G +D+ YT++++GL
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 290 CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
K G EA + ++ P+ VTY ++ L + GD AE ++ QM+ + ++
Sbjct: 340 FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 396
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 165/332 (49%), Gaps = 13/332 (3%)
Query: 21 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALC 80
L+ +M + I P +++ ++ C G+++EA+ +LNQM++ I+P++ T+ I +D
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 81 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 140
K + ++ G K Y++L+ C + KA + M PD
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
+++ +++G V AL+ + M I+P+V TY+++I GL +G I + + ++EM
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 774
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
SRG+ P+ TY++L+ K ++ ++++ +M G++P TY +L+ G++
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 834
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLC------------KDGLFDEALALMSKM-ED 307
A+E+ +++ +G + + TY MI+GLC K EA L+ +M E+
Sbjct: 835 LQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEE 894
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
G P T I A + G AE+ L++
Sbjct: 895 KGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 165/321 (51%), Gaps = 1/321 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ ++D L K + +A + +L P+VVTYT L+ G C G L A ++ QM
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ KS+ P+V T+S +++ K+G ++EA ++L M P+ TY +++DG +
Sbjct: 391 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 450
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A ++ M + + + ++N L +I + + L K M ++ +T D + Y+SL
Sbjct: 451 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 510
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
ID K G A EM RG+P +V++Y+ L+ + K V A K M+ +GI
Sbjct: 511 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGI 569
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD+ T+ I+++ K G + +++ + G + + I++ LC++G +EA+
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 301 LMSKMEDNGCTPDAVTYEIII 321
++++M P+ TY I +
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFL 650
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 133/281 (47%), Gaps = 13/281 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +D+ K K + + + +L+ I Y TLI+ C +G K+A ++ M
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD TF+ L+ V++A + +VM++ G P+V TY++++ G +
Sbjct: 706 ARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIK 765
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + + M + PD +Y+ +I+G KI + ++ ++ +M + + P TY+ LI
Sbjct: 766 EVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLI 825
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK--NH----------HVDNAI 229
G++ A EL+ EM RG+ PN TY +++ LCK H ++ A
Sbjct: 826 SEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAK 885
Query: 230 SLIKKM-KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
L+K+M + +G +P T + K G DA+ ++
Sbjct: 886 GLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 100/186 (53%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+I +LCK + A + +M A+ PD VT+ +L+ G+ + +++A+ + M
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I+P+V T++ ++ L G +KE L+ M G +PD TY++L+ G + +
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ I+ M L P +Y+++I+ + + A L K+M ++P+ TY ++
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 181 IDGLCK 186
I GLCK
Sbjct: 860 ISGLCK 865
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 183/313 (58%), Gaps = 1/313 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIIDSLC+ VN A ++ M I PDVVTY +LI+ G + +L+ M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I+PDV TFS L+D KEG++ EAK MI+ P++VTY+SL++G C+ +
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ + N + P+ +Y+ +ING CK K VDD + + M + + D TY++L
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
G C++G+ S A +++ M S G+ P++ T++ LLD LC + + A+ ++ ++
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT 425
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ + TY I++ GLCK +++DA +F L +KG + DV TY M+ GL + L+ EA
Sbjct: 426 VVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHE 485
Query: 301 LMSKME-DNGCTP 312
L KM+ ++G P
Sbjct: 486 LYRKMQKEDGLMP 498
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 197/344 (57%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+ID C+ ++ A + +M+ P +VT+ +L++GFC V + EA+ L++Q+V
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+V ++ ++D+LC++G+V A +VL M K G +PDVVTY+SL+
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ I + M RM ++PDV ++S +I+ K + +A + +M ++ P++VTY+SLI
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GLC G + +A +++N + S+G PN +TY++L++ CK VD+ + ++ M G+
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D +TY L G C+ G+ A++V ++ G + D+ T+ I+++GLC G +AL
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ ++ + +TY III L + + A L + +G+
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGV 460
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 180/330 (54%)
Query: 16 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSIL 75
NDA L+ +M P +V ++ L+ + + + + L + + I+ D+Y+F+ L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
+D C+ ++ A + L M+K G +P +VT+ SL++G+C VN +A + + + +
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
P+V Y+ +I+ LC+ V+ AL++ K M I PDVVTY+SLI L SG +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
++++M G+ P+VIT+S+L+D K + A +M + + P++ TY L++GLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
G L +A++V L+ KG+ + TY +ING CK D+ + ++ M +G D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
TY + Q G AEK+L +M++ G+
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 165/310 (53%), Gaps = 2/310 (0%)
Query: 24 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEG 83
EML IS D+ ++TTLI FC +L A+ L +M+ P + TF LV+ C
Sbjct: 106 EMLG--ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN 163
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
+ EA +++ ++ G +P+VV Y++++D C +VN A D+ M +M + PDV +Y+
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN 223
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+I L + + M I+PDV+T+S+LID K G++ +A + NEM R
Sbjct: 224 SLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR 283
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
+ PN++TY+SL++ LC + +D A ++ + +G P+ TY L++G CK R+ D
Sbjct: 284 SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
++ + G + D TY + G C+ G F A ++ +M G PD T+ I++
Sbjct: 344 MKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403
Query: 324 LFQEGDNDKA 333
L G KA
Sbjct: 404 LCDHGKIGKA 413
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 153/289 (52%)
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
+ +A+ L M P + FS L+ A+ K K + ++ + G D+ +++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
+L+D +C ++ A M ++ P + ++ ++NG C + +A++L Q+
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
P+VV Y+++ID LC+ G+++ A +++ M G+ P+V+TY+SL+ L + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
++ M GI PDV T++ L+D K G+L +A++ + +++ + N ++ TY +ING
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
LC GL DEA +++ + G P+AVTY +I + D K+L
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 191/344 (55%), Gaps = 1/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS++I LC V+ A ++++E+ ++ S DVVTY T++ GFC G++KE++ L M
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K+ + ++ +++IL+ L + GK+ EA + +M G D TY + G C+ VN
Sbjct: 353 HKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + + DV +Y+ +I+ LCK K +++A NL K+M + + ++LI
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GL + R+ +A + EM G P V++Y+ L+ LCK A + +K+M G
Sbjct: 472 GGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ TY+ILL GLC+ ++ A E++ L G DV + I+I+GLC G D+A+ +
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M+ ME CT + VTY ++ F+ GD+++A + M GL
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 196/345 (56%), Gaps = 2/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++++ + K +L++ ++P++ TY LI C + ++A G L+ M
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PDV+++S +++ L K GK+ +A + M + G PDV Y+ L+DG+ +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 122 KAEDIFNTMTR-MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A ++++ + + P+V++++IMI+GL K VDD L ++++M D+ TYSSL
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GLC +G + A + NE+ R +V+TY+++L C+ + ++ L + M+H+
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS 356
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ ++ +Y IL+ GL + G++ +A +++ + KGY D TY I I+GLC +G ++AL
Sbjct: 357 V-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M ++E +G D Y II L ++ ++A L+++M G+
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 172/346 (49%), Gaps = 3/346 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y I+ L + ++VN + + ++ D ++I + +A+ + +M
Sbjct: 45 VYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 61 V-VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+ P + +++ L++A + + + +++ A G P++ TY+ L+ C E
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
KA + M + PDV SYS +IN L K +DDAL LF +M + PDV Y+
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNI 224
Query: 180 LIDGLCKSGRISDAWELVNE-MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
LIDG K A EL + + + PNV T++ ++ L K VD+ + + ++MK
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN 284
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
D+YTY+ L+ GLC G + A+ VF +L + ++DV TY M+ G C+ G E+
Sbjct: 285 EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES 344
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L L ME + + V+Y I+I L + G D+A + R M A+G
Sbjct: 345 LELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 138/250 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y++IID LCK K + +A NL EM + + LI G +L EA L +M
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P V +++IL+ LCK GK EA + M++ G KPD+ TYS L+ G C +++
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++++ + L DV ++I+I+GLC + +DDA+ + M N T ++VTY++L+
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G K G + A + M+ GL P++I+Y++++ LC V A+ ++ GI
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF 671
Query: 242 PDVYTYTILL 251
P VYT+ IL+
Sbjct: 672 PTVYTWNILV 681
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 167/323 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I L ++ +++A ++ M AK + D TY I G C+ G + +A+G++ ++
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ DVY ++ ++D LCK+ +++EA N++ M K G + + ++L+ G + +
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A M + P V SY+I+I GLCK +A K+M PD+ TYS L+
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GLC+ +I A EL ++ GL +V+ ++ L+ LC +D+A++++ M+H+
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
++ TY L++G K G A ++ + G D+ +Y ++ GLC A+
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 302 MSKMEDNGCTPDAVTYEIIIYAL 324
++G P T+ I++ A+
Sbjct: 662 FDDARNHGIFPTVYTWNILVRAV 684
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 214 SLLDALCKNHHVDNAISLIKKMKH-QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
S++ KN D A+ + K+M+ G P + +Y LL+ + + + +F
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
G +++TY ++I CK F++A + M G PD +Y +I L + G D
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 333 AEKLLRQMIARGL 345
A +L +M RG+
Sbjct: 203 ALELFDEMSERGV 215
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 189/337 (56%), Gaps = 1/337 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YST++D LC+ + + DA K I P VV++ +++SG+C +G + A ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P VY+ +IL++ LC G + EA + + M K G +PD VTY+ L G+ L+ ++
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD-VVTYSSL 180
A ++ M L+PDV +Y+I++ G C++ +D L L K M + + ++ S +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ GLCK+GRI +A L N+M + GL P+++ YS ++ LCK D A+ L +M + I
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
LP+ T+ LL GLC+ G L +A+ + L+ G LD+ Y I+I+G K G +EAL
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
L + + G TP T+ +IY + + +A K+L
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 188/357 (52%), Gaps = 16/357 (4%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S ++ LCK +++A +L+++M A +SPD+V Y+ +I G C +G+ A+ L ++M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K I P+ T L+ LC++G + EA+++L +I GE D+V Y+ ++DGY + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F + + P V +++ +I G CK + + +A + + + P VV+Y++L+D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK-------- 234
G EL EM + G+PP +TYS + LC+ +N ++++
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 235 ----MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR--TYTIMING 288
M+ +GI PD TY ++ LC+ L A VF +++ K NLD TY I+I+
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIM-KSRNLDASSATYNILIDS 664
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
LC G +A + + +++ + Y +I A +GD + A KL Q++ RG
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 162/276 (58%), Gaps = 1/276 (0%)
Query: 70 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 129
+T+S +VD LC++ K+++A L P VV+++S+M GYC + V+ A+ F T
Sbjct: 188 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
+ + L P V S++I+INGLC + + +AL L M+ + PD VTY+ L G G
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 190 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI-LPDVYTYT 248
IS AWE++ +M +GL P+VITY+ LL C+ ++D + L+K M +G L + +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 308
++L GLCK GR+ +A +F + G + D+ Y+I+I+GLCK G FD AL L +M D
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 309 GCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
P++ T+ ++ L Q+G +A LL +I+ G
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 182/341 (53%), Gaps = 1/341 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I+ LC + +A L S+M + PD VTY L GF ++G + A ++ M+
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEV 120
K ++PDV T++IL+ C+ G + +L M+ +G E ++ S ++ G C +
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A +FN M L+PD+ +YSI+I+GLCK+ D AL L+ +M + I P+ T+ +L
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ GLC+ G + +A L++ + S G +++ Y+ ++D K+ ++ A+ L K + GI
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P V T+ L+ G CK + +A+++ + + G V +YT +++ G
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
L +M+ G P VTY +I L + ++ +LR+ I
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 179/345 (51%), Gaps = 13/345 (3%)
Query: 14 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPD-VYTF 72
+++ A+ + +ML K +SPDV+TYT L+ G C +G + + LL M+ + + +
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
S+++ LCK G++ EA ++ M G PD+V YS ++ G C + + + A +++ M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
+ P+ +++ ++ GLC+ M+ +A +L + + T D+V Y+ +IDG KSG I +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
A EL + G+ P+V T++SL+ CK ++ A ++ +K G+ P V +YT L+D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK------------DGLFDEALA 300
G K E+ +++ +G TY+++ GLC+ + +F++
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ ME G PD +TY II L + A L M +R L
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 160/335 (47%), Gaps = 12/335 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I LCK + A LY EM KRI P+ T+ L+ G C G L EA LL+ ++
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
D+ ++I++D K G ++EA + V+I+ G P V T++SL+ GYC +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I + + LAP V SY+ +++ L ++M E I P VTYS +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 182 DGLCKSGRISDAWELVNE------------MHSRGLPPNVITYSSLLDALCKNHHVDNAI 229
GLC+ + + ++ E M S G+PP+ ITY++++ LC+ H+ A
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 230 SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
++ MK + + TY IL+D LC G ++ A L + +L YT +I
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Query: 290 CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
C G + A+ L ++ G Y +I L
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 141/242 (58%), Gaps = 1/242 (0%)
Query: 106 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 165
TYS+++DG C ++ A T ++ P V S++ +++G CK+ VD A + F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 166 HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
+ P V +++ LI+GLC G I++A EL ++M+ G+ P+ +TY+ L +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD-VRTYTI 284
A +I+ M +G+ PDV TYTILL G C+ G + + +D+L +G+ L+ + ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
M++GLCK G DEAL+L ++M+ +G +PD V Y I+I+ L + G D A L +M +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 345 LL 346
+L
Sbjct: 429 IL 430
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 23/296 (7%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +ID K + +A L+ ++ I+P V T+ +LI G+C + EA +L+ +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + P V +++ L+DA G K + M G P VTYS + G C
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC---RG 586
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
K E+ N + + ++ + + M +E I PD +TY+++
Sbjct: 587 WKHEN--------------------CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I LC+ +S A+ + M SR L + TY+ L+D+LC ++ A S I ++ Q +
Sbjct: 627 IQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+ YT L+ C G + A ++F LL +G+N+ +R Y+ +IN LC+ L +
Sbjct: 687 SLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
+++MVDD+L + K+M +N+ +Y+S++ ++ ++ W++ E+ + N
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIKDK----NEH 188
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
TYS+++D LC+ +++A+ ++ + + I P V ++ ++ G CK G + A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
L G V ++ I+INGLC G EAL L S M +G PD+VTY I+ G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 331 DKAEKLLRQMIARGL 345
A +++R M+ +GL
Sbjct: 309 SGAWEVIRDMLDKGL 323
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 189/337 (56%), Gaps = 1/337 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YST++D LC+ + + DA K I P VV++ +++SG+C +G + A ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P VY+ +IL++ LC G + EA + + M K G +PD VTY+ L G+ L+ ++
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD-VVTYSSL 180
A ++ M L+PDV +Y+I++ G C++ +D L L K M + + ++ S +
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ GLCK+GRI +A L N+M + GL P+++ YS ++ LCK D A+ L +M + I
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
LP+ T+ LL GLC+ G L +A+ + L+ G LD+ Y I+I+G K G +EAL
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
L + + G TP T+ +IY + + +A K+L
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 188/357 (52%), Gaps = 16/357 (4%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S ++ LCK +++A +L+++M A +SPD+V Y+ +I G C +G+ A+ L ++M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K I P+ T L+ LC++G + EA+++L +I GE D+V Y+ ++DGY + +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++F + + P V +++ +I G CK + + +A + + + P VV+Y++L+D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK-------- 234
G EL EM + G+PP +TYS + LC+ +N ++++
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 235 ----MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR--TYTIMING 288
M+ +GI PD TY ++ LC+ L A VF +++ K NLD TY I+I+
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIM-KSRNLDASSATYNILIDS 664
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
LC G +A + + +++ + Y +I A +GD + A KL Q++ RG
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 162/276 (58%), Gaps = 1/276 (0%)
Query: 70 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 129
+T+S +VD LC++ K+++A L P VV+++S+M GYC + V+ A+ F T
Sbjct: 188 HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
+ + L P V S++I+INGLC + + +AL L M+ + PD VTY+ L G G
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 190 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI-LPDVYTYT 248
IS AWE++ +M +GL P+VITY+ LL C+ ++D + L+K M +G L + +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 308
++L GLCK GR+ +A +F + G + D+ Y+I+I+GLCK G FD AL L +M D
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 309 GCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
P++ T+ ++ L Q+G +A LL +I+ G
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 182/341 (53%), Gaps = 1/341 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I+ LC + +A L S+M + PD VTY L GF ++G + A ++ M+
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEV 120
K ++PDV T++IL+ C+ G + +L M+ +G E ++ S ++ G C +
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A +FN M L+PD+ +YSI+I+GLCK+ D AL L+ +M + I P+ T+ +L
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ GLC+ G + +A L++ + S G +++ Y+ ++D K+ ++ A+ L K + GI
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P V T+ L+ G CK + +A+++ + + G V +YT +++ G
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
L +M+ G P VTY +I L + ++ +LR+ I
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 179/345 (51%), Gaps = 13/345 (3%)
Query: 14 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPD-VYTF 72
+++ A+ + +ML K +SPDV+TYT L+ G C +G + + LL M+ + + +
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
S+++ LCK G++ EA ++ M G PD+V YS ++ G C + + + A +++ M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
+ P+ +++ ++ GLC+ M+ +A +L + + T D+V Y+ +IDG KSG I +
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
A EL + G+ P+V T++SL+ CK ++ A ++ +K G+ P V +YT L+D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK------------DGLFDEALA 300
G K E+ +++ +G TY+++ GLC+ + +F++
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ ME G PD +TY II L + A L M +R L
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 160/335 (47%), Gaps = 12/335 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I LCK + A LY EM KRI P+ T+ L+ G C G L EA LL+ ++
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
D+ ++I++D K G ++EA + V+I+ G P V T++SL+ GYC +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I + + LAP V SY+ +++ L ++M E I P VTYS +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 182 DGLCKSGRISDAWELVNE------------MHSRGLPPNVITYSSLLDALCKNHHVDNAI 229
GLC+ + + ++ E M S G+PP+ ITY++++ LC+ H+ A
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 230 SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
++ MK + + TY IL+D LC G ++ A L + +L YT +I
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Query: 290 CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
C G + A+ L ++ G Y +I L
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 141/242 (58%), Gaps = 1/242 (0%)
Query: 106 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 165
TYS+++DG C ++ A T ++ P V S++ +++G CK+ VD A + F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 166 HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
+ P V +++ LI+GLC G I++A EL ++M+ G+ P+ +TY+ L +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD-VRTYTI 284
A +I+ M +G+ PDV TYTILL G C+ G + + +D+L +G+ L+ + ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
M++GLCK G DEAL+L ++M+ +G +PD V Y I+I+ L + G D A L +M +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 345 LL 346
+L
Sbjct: 429 IL 430
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 23/296 (7%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +ID K + +A L+ ++ I+P V T+ +LI G+C + EA +L+ +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + P V +++ L+DA G K + M G P VTYS + G C
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC---RG 586
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
K E+ N + + ++ + + M +E I PD +TY+++
Sbjct: 587 WKHEN--------------------CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I LC+ +S A+ + M SR L + TY+ L+D+LC ++ A S I ++ Q +
Sbjct: 627 IQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+ YT L+ C G + A ++F LL +G+N+ +R Y+ +IN LC+ L +
Sbjct: 687 SLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
+++MVDD+L + K+M +N+ +Y+S++ ++ ++ W++ E+ + N
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKM---WDVYKEIKDK----NEH 188
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
TYS+++D LC+ +++A+ ++ + + I P V ++ ++ G CK G + A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
L G V ++ I+INGLC G EAL L S M +G PD+VTY I+ G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 331 DKAEKLLRQMIARGL 345
A +++R M+ +GL
Sbjct: 309 SGAWEVIRDMLDKGL 323
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 191/342 (55%), Gaps = 3/342 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
++++++L K V DA L+ E L + D T+ LI G C VG+ ++A+ LL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVN 121
PD+ T++ L+ CK ++ +A + + G PDVVTY+S++ GYC ++
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M R+ + P +++++++G K + A + +M + PDVVT++SLI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG C+ G++S + L EM++RG+ PN TYS L++ALC + + A L+ ++ + I+
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P + Y ++DG CK G++ +A + +++ K D T+TI+I G C G EA+++
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
KM GC+PD +T ++ L + G +A L IAR
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL--NQIAR 514
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 194/377 (51%), Gaps = 34/377 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ-- 59
Y+ + SLCK L + A ++ M + +SP+ L+S F G+L A LL Q
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 60 ------MVVKSI-------------------------NPDVYTFSILVDALCKEGKVKEA 88
MVV S+ D TF+IL+ LC GK ++A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL-APDVQSYSIMIN 147
+L VM G +PD+VTY++L+ G+C NE+NKA ++F + + +PDV +Y+ MI+
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
G CK + +A +L M I P VT++ L+DG K+G + A E+ +M S G P
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+V+T++SL+D C+ V L ++M +G+ P+ +TY+IL++ LC RL A+E+
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
L K Y +I+G CK G +EA ++ +ME C PD +T+ I+I +
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 328 GDNDKAEKLLRQMIARG 344
G +A + +M+A G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 156/268 (58%), Gaps = 1/268 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRI-SPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+T+I CK +N A ++ ++ + + SPDVVTYT++ISG+C G+++EA LL+ M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I P TF++LVD K G++ A+ + MI G PDVVT++SL+DGYC V +V
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++ ++ M + P+ +YSI+IN LC + A L Q+ +++I P Y+ +
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
IDG CK+G++++A +V EM + P+ IT++ L+ C + A+S+ KM G
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGC 483
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
PD T + LL L K G K+A + Q
Sbjct: 484 SPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 168/315 (53%), Gaps = 4/315 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I LC A L M PD+VTY TLI GFC +L +A + +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 62 VKSI-NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
S+ +PDV T++ ++ CK GK++EA ++L M++ G P VT++ L+DGY E+
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
AE+I M PDV +++ +I+G C++ V L+++M+ + P+ TYS L
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+ LC R+ A EL+ ++ S+ + P Y+ ++D CK V+ A ++++M+ +
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD T+TIL+ G C GR+ +A +F ++ G + D T + +++ L K G+ EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 301 L---MSKMEDNGCTP 312
L K + N P
Sbjct: 509 LNQIARKGQSNNVVP 523
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 161/319 (50%), Gaps = 5/319 (1%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
I TY L C G A + M ++P+ LV + ++GK+ A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 90 NVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 148
A++++ E + + +SL++ ++ V A +F+ R + D ++++I+I G
Sbjct: 159 ---ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 149 LCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PP 207
LC + + AL L M PD+VTY++LI G CKS ++ A E+ ++ S + P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+V+TY+S++ CK + A SL+ M GI P T+ +L+DG K G + A+E+
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
++ G DV T+T +I+G C+ G + L +M G P+A TY I+I AL E
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 328 GDNDKAEKLLRQMIARGLL 346
KA +LL Q+ ++ ++
Sbjct: 396 NRLLKARELLGQLASKDII 414
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+ +ID CK VN+A + EM K+ PD +T+T LI G C+ G++ EAV + ++M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 98
V +PD T S L+ L K G KEA ++ + KG
Sbjct: 479 VAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
NI TY+ L LCK+G A ++ M S G+ PN L+ + + + A
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 229 IS-LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
+ L++ + +G V + LL+ L K R++DA ++F + L D +T+ I+I
Sbjct: 158 TALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
GLC G ++AL L+ M GC PD VTY +I + + +KA ++ +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 191/342 (55%), Gaps = 3/342 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
++++++L K V DA L+ E L + D T+ LI G C VG+ ++A+ LL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVN 121
PD+ T++ L+ CK ++ +A + + G PDVVTY+S++ GYC ++
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M R+ + P +++++++G K + A + +M + PDVVT++SLI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG C+ G++S + L EM++RG+ PN TYS L++ALC + + A L+ ++ + I+
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P + Y ++DG CK G++ +A + +++ K D T+TI+I G C G EA+++
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
KM GC+PD +T ++ L + G +A L IAR
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL--NQIAR 514
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 194/377 (51%), Gaps = 34/377 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ-- 59
Y+ + SLCK L + A ++ M + +SP+ L+S F G+L A LL Q
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 60 ------MVVKSI-------------------------NPDVYTFSILVDALCKEGKVKEA 88
MVV S+ D TF+IL+ LC GK ++A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL-APDVQSYSIMIN 147
+L VM G +PD+VTY++L+ G+C NE+NKA ++F + + +PDV +Y+ MI+
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
G CK + +A +L M I P VT++ L+DG K+G + A E+ +M S G P
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+V+T++SL+D C+ V L ++M +G+ P+ +TY+IL++ LC RL A+E+
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
L K Y +I+G CK G +EA ++ +ME C PD +T+ I+I +
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 328 GDNDKAEKLLRQMIARG 344
G +A + +M+A G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 156/268 (58%), Gaps = 1/268 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRI-SPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+T+I CK +N A ++ ++ + + SPDVVTYT++ISG+C G+++EA LL+ M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I P TF++LVD K G++ A+ + MI G PDVVT++SL+DGYC V +V
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++ ++ M + P+ +YSI+IN LC + A L Q+ +++I P Y+ +
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
IDG CK+G++++A +V EM + P+ IT++ L+ C + A+S+ KM G
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGC 483
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
PD T + LL L K G K+A + Q
Sbjct: 484 SPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 168/315 (53%), Gaps = 4/315 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I LC A L M PD+VTY TLI GFC +L +A + +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 62 VKSI-NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
S+ +PDV T++ ++ CK GK++EA ++L M++ G P VT++ L+DGY E+
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
AE+I M PDV +++ +I+G C++ V L+++M+ + P+ TYS L
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+ LC R+ A EL+ ++ S+ + P Y+ ++D CK V+ A ++++M+ +
Sbjct: 389 INALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD T+TIL+ G C GR+ +A +F ++ G + D T + +++ L K G+ EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 301 L---MSKMEDNGCTP 312
L K + N P
Sbjct: 509 LNQIARKGQSNNVVP 523
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 161/319 (50%), Gaps = 5/319 (1%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
I TY L C G A + M ++P+ LV + ++GK+ A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 90 NVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 148
A++++ E + + +SL++ ++ V A +F+ R + D ++++I+I G
Sbjct: 159 ---ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 149 LCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PP 207
LC + + AL L M PD+VTY++LI G CKS ++ A E+ ++ S + P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+V+TY+S++ CK + A SL+ M GI P T+ +L+DG K G + A+E+
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
++ G DV T+T +I+G C+ G + L +M G P+A TY I+I AL E
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 328 GDNDKAEKLLRQMIARGLL 346
KA +LL Q+ ++ ++
Sbjct: 396 NRLLKARELLGQLASKDII 414
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 57/98 (58%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+ +ID CK VN+A + EM K+ PD +T+T LI G C+ G++ EAV + ++M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 98
V +PD T S L+ L K G KEA ++ + KG
Sbjct: 479 VAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
NI TY+ L LCK+G A ++ M S G+ PN L+ + + + A
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 229 IS-LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
+ L++ + +G V + LL+ L K R++DA ++F + L D +T+ I+I
Sbjct: 158 TALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
GLC G ++AL L+ M GC PD VTY +I + + +KA ++ +
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 193/371 (52%), Gaps = 27/371 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ ++ CK L + L + M + + P+ V Y T++S FC G+ ++ ++ +M
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM----IKGGEKPDVVTYSSLMDGYCLV 117
+ + PD+ TF+ + ALCKEGKV +A + + M G +P+ +TY+ ++ G+C V
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
+ A+ +F ++ + +QSY+I + GL + +A + KQM + I P + +Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ L+DGLCK G +SDA +V M G+ P+ +TY LL C VD A SL+++M
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
LP+ YT ILL L K GR+ +A+E+ + + KGY LD T I+++GLC G D+
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 298 ALALMSKME-----------------------DNGCTPDAVTYEIIIYALFQEGDNDKAE 334
A+ ++ M +N C PD +TY ++ L + G +A+
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 335 KLLRQMIARGL 345
L +M+ L
Sbjct: 545 NLFAEMMGEKL 555
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 181/367 (49%), Gaps = 23/367 (6%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++ CK L+ DA L+ + + +Y + G G+ EA +L QM
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I P +Y+++IL+D LCK G + +AK ++ +M + G PD VTY L+ GYC V +V+
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ + M R P+ + +I+++ L K+ + +A L ++M+ + D VT + ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 182 DGLCKSGRISDAWELVNEMHSRGLP-----------------------PNVITYSSLLDA 218
DGLC SG + A E+V M G P++ITYS+LL+
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 219 LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
LCK A +L +M + + PD Y I + CK G++ A V +D+ KG +
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
+ TY +I GL E LM +M++ G +P+ TY I L + + A LL
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 339 QMIARGL 345
+M+ + +
Sbjct: 654 EMMQKNI 660
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 180/348 (51%), Gaps = 4/348 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +++S K++ V LY +M+ I+P T+ LI C + A L ++M
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM 173
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K P+ +TF ILV CK G + +L M G P+ V Y++++ +C
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI----TPDVVT 176
+ +E + M L PD+ +++ I+ LCK V DA +F M + P+ +T
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y+ ++ G CK G + DA L + ++ +Y+ L L ++ A +++K+M
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+GI P +Y+Y IL+DGLCK G L DA+ + + G D TY +++G C G D
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
A +L+ +M N C P+A T I++++L++ G +AE+LLR+M +G
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 171/320 (53%), Gaps = 6/320 (1%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLL-NQMVVKSINPDVYTFSILVDALCKEGKVKEAKN 90
P V Y L+ CI + E V L MV+ I P YTF++L+ ALC V A+
Sbjct: 110 PSVYLYNLLLES-CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 91 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 150
+ M + G KP+ T+ L+ GYC +K ++ N M + P+ Y+ +++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM---HSRGLP- 206
+ DD+ + ++M E + PD+VT++S I LCK G++ DA + ++M GLP
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
PN ITY+ +L CK +++A +L + ++ L + +Y I L GL + G+ +A+ V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+ + KG + +Y I+++GLCK G+ +A ++ M+ NG PDAVTY +++
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 327 EGDNDKAEKLLRQMIARGLL 346
G D A+ LL++M+ L
Sbjct: 409 VGKVDAAKSLLQEMMRNNCL 428
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 193/432 (44%), Gaps = 92/432 (21%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++D LCK +++DA + M + PD VTY L+ G+C VG++ A LL +M+
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+ YT +IL+ +L K G++ EA+ +L M + G D VT + ++DG C E++
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELD 483
Query: 122 KAEDIFNTMTRMELA-----------------------PDVQSYSIMINGLCKIKMVDDA 158
KA +I M A PD+ +YS ++NGLCK +A
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE----------------------- 195
NLF +M E + PD V Y+ I CK G+IS A+
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603
Query: 196 ------------LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
L++EM +G+ PN+ TY++ + LC+ V++A +L+ +M + I P+
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 244 VYTYTILLDGLCK----------------------------------GGRLKDAQEVFQD 269
V+++ L++ CK G+L A E+ +
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEA 723
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+L +G+ L Y ++ LCK + A ++ KM D G D +I L + G+
Sbjct: 724 VLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGN 783
Query: 330 NDKAEKLLRQMI 341
+A +M+
Sbjct: 784 KKEANSFADKMM 795
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 130/249 (52%), Gaps = 4/249 (1%)
Query: 101 KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN 160
KP V Y+ L++ V ++ M +AP +++++I LC VD A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 161 LFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 220
LF +M + P+ T+ L+ G CK+G EL+N M S G+ PN + Y++++ + C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 221 KNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY----N 276
+ D++ +++KM+ +G++PD+ T+ + LCK G++ DA +F D+ + Y
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
+ TY +M+ G CK GL ++A L + +N +Y I + L + G +AE +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 337 LRQMIARGL 345
L+QM +G+
Sbjct: 349 LKQMTDKGI 357
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 135/276 (48%), Gaps = 35/276 (12%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
PD++TY+TL++G C G+ EA L +M+ + + PD ++I + CK+GK+ A V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
L M K G + TY+SL+ G + N++ + + + M ++P++ +Y+ I LC+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK------------------------- 186
+ V+DA NL +M +NI P+V ++ LI+ CK
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 187 ---------SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+G++ A EL+ + RG Y L+++LCK ++ A ++ KM
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
+G D ++DGL K G K+A F D +++
Sbjct: 762 RGYGFDPAALMPVIDGLGKMGNKKEANS-FADKMME 796
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 174/299 (58%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +ID+LCK++LV A + M + ISP+VVTY++LI+G C G+L +A L++M
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS 111
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K INP+V TFS L+DA K GK+ + +V +MI+ P+V TYSSL+ G C+ N V++
Sbjct: 112 KKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDE 171
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A + + M P+V +YS + NG K VDD + L M + + V+ ++LI
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G ++G+I A + M S GL PN+ +Y+ +L L N V+ A+S + M+
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDL 291
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D+ TYTI++ G+CK +K+A ++F L K D + YTIMI L + G+ EA AL
Sbjct: 292 DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 188/336 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++++ C + DA + +M I DVV T LI C + A+ +L +M
Sbjct: 17 SSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKD 76
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ I+P+V T+S L+ LCK G++ +A+ L M P+V+T+S+L+D Y +++K
Sbjct: 77 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 136
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+ ++ M +M + P+V +YS +I GLC VD+A+ + M ++ TP+VVTYS+L +
Sbjct: 137 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 196
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G KS R+ D +L+++M RG+ N ++ ++L+ + +D A+ + M G++P
Sbjct: 197 GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 256
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
++ +Y I+L GL G ++ A F+ + +LD+ TYTIMI+G+CK + EA L
Sbjct: 257 NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLF 316
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
K++ PD Y I+I L + G +A+ L R
Sbjct: 317 YKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 149/252 (59%)
Query: 95 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 154
M+K G +PD+VT SSL++G+CL N + A + M +M + DV +I+I+ LCK ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 155 VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 214
V AL + K+M I+P+VVTYSSLI GLCKSGR++DA ++EM S+ + PNVIT+S+
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 215 LLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
L+DA K + S+ K M I P+V+TY+ L+ GLC R+ +A ++ ++ KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 275 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAE 334
+V TY+ + NG K D+ + L+ M G + V+ +I FQ G D A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 335 KLLRQMIARGLL 346
+ M + GL+
Sbjct: 244 GVFGYMTSNGLI 255
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 146/282 (51%)
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+M+ I PD+ T S LV+ C +K+A V M K G K DVV + L+D C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
V A ++ M ++P+V +YS +I GLCK + DA +M ++ I P+V+T+S
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+LID K G++S + M + PNV TYSSL+ LC ++ VD AI ++ M +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G P+V TY+ L +G K R+ D ++ D+ +G + + +I G + G D A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L + M NG P+ +Y I++ LF G+ +KA M
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 148/279 (53%), Gaps = 5/279 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS++I LCK + DA EM +K+I+P+V+T++ LI + G+L + + M+
Sbjct: 86 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 145
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
SI+P+V+T+S L+ LC +V EA +L +MI G P+VVTYS+L +G+ + V+
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + M + +A + S + +I G + +D AL +F M + + P++ +Y+ ++
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 265
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GL +G + A M ++ITY+ ++ +CK V A L K+K + +
Sbjct: 266 AGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVE 325
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 280
PD YTI++ L + G +A D L + Y VR
Sbjct: 326 PDFKAYTIMIAELNRAGMRTEA-----DALNRFYQKHVR 359
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 80/143 (55%)
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
+M G+ P+++T SSL++ C ++ + +A+ + +M+ GI DV TIL+D LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYE 318
+ A EV + + +G + +V TY+ +I GLCK G +A + +M+ P+ +T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 319 IIIYALFQEGDNDKAEKLLRQMI 341
+I A + G K + + + MI
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMI 145
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 183/341 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I LC+ + Y L +M + I P+ VTY TLI+GF G++ A LLN+M+
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++P+ TF+ L+D EG KEA + +M G P V+Y L+DG C E +
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M R + +Y+ MI+GLCK +D+A+ L +M + I PD+VTYS+LI
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G CK GR A E+V ++ GL PN I YS+L+ C+ + AI + + M +G
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 545
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D +T+ +L+ LCK G++ +A+E + + G + ++ +ING G +A ++
Sbjct: 546 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 605
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
+M G P TY ++ L + G +AEK L+ + A
Sbjct: 606 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 186/345 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I+ LC + + L +M +P +VTY T++ +C G+ K A+ LL+ M
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K ++ DV T+++L+ LC+ ++ + +L M K P+ VTY++L++G+ +V
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + N M L+P+ +++ +I+G +AL +F M + +TP V+Y L+
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLCK+ A M G+ ITY+ ++D LCKN +D A+ L+ +M GI
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ TY+ L++G CK GR K A+E+ + G + + Y+ +I C+ G EA+ +
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
M G T D T+ +++ +L + G +AE+ +R M + G+L
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 184/345 (53%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +I ++ ++ D+ ++ M +P V T ++ G+ L +M
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + I PDV TF+IL++ LC EG +++ ++ M K G P +VTY++++ YC
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A ++ + M + DV +Y+++I+ LC+ + L + M I P+ VTY++L
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+G G++ A +L+NEM S GL PN +T+++L+D + A+ + M+ +G+
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P +Y +LLDGLCK A+ + + G + TYT MI+GLCK+G DEA+
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L+++M +G PD VTY +I + G A++++ ++ GL
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 179/343 (52%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ CK A L M +K + DV TY LI C ++ + LL M
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I+P+ T++ L++ EGKV A +L M+ G P+ VT+++L+DG+
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F M L P SY ++++GLCK D A + +M + +TY+ +I
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLCK+G + +A L+NEM G+ P+++TYS+L++ CK A ++ ++ G+
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ Y+ L+ C+ G LK+A +++ ++++G+ D T+ +++ LCK G EA
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
M M +G P+ V+++ +I G+ KA + +M G
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 176/342 (51%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ I+ S+ K ++ EML ++I PDV T+ LI+ C G +++ L+ +M
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 261
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
P + T++ ++ CK+G+ K A +L M G DV TY+ L+ C N + K
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+ M + + P+ +Y+ +ING V A L +M + ++P+ VT+++LID
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G G +A ++ M ++GL P+ ++Y LLD LCKN D A +MK G+
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 441
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
TYT ++DGLCK G L +A + ++ G + D+ TY+ +ING CK G F A ++
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
++ G +P+ + Y +IY + G +A ++ MI G
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 190/415 (45%), Gaps = 71/415 (17%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ------------ 49
Y+ +ID LCK+ +++A L +EM I PD+VTY+ LI+GFC VG+
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 50 -----------------------LKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVK 86
LKEA+ + M+++ D +TF++LV +LCK GKV
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
EA+ + M G P+ V++ L++GY E KA +F+ MT++ P +Y ++
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 147 NGLCKIKMVDDA-----------------------------------LNLFKQMHTENIT 171
GLCK + +A ++LF +M +I
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 172 PDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG-LPPNVITYSSLLDALCKNHHVDNAIS 230
PD TY+SLI GLC+ G+ A E +RG + PN + Y+ +D + K I
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
++M + G PD+ T ++DG + G+++ ++ ++ + ++ TY I+++G
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
K + L + NG PD +T ++ + + + K+L+ I RG+
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 176/342 (51%), Gaps = 1/342 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+T++ ++CK + A +L+ EM+ + I PD TYT+LISG C G+ A+ +
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 714
Query: 61 VVK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+ ++ P+ ++ VD + K G+ K M G PD+VT ++++DGY + +
Sbjct: 715 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 774
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ K D+ M P++ +Y+I+++G K K V + L++ + I PD +T S
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ G+C+S + +++ RG+ + T++ L+ C N ++ A L+K M G
Sbjct: 835 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 894
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
I D T ++ L + R ++++ V ++ +G + + R Y +INGLC+ G A
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
+ +M + P V ++ AL + G D+A LLR M+
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 996
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 144/280 (51%), Gaps = 2/280 (0%)
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
NP VY IL+ +EG ++++ + +M G P V T ++++ E
Sbjct: 162 NPSVY--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
M + ++ PDV +++I+IN LC + + L ++M P +VTY++++ C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
K GR A EL++ M S+G+ +V TY+ L+ LC+++ + L++ M+ + I P+
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
TY L++G G++ A ++ ++L G + + T+ +I+G +G F EAL + M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
E G TP V+Y +++ L + + D A +M G+
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 439
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 168/345 (48%), Gaps = 1/345 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +ID + + +L EM + P++ TY L+ G+ + + L +++
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 822
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
I PD T LV +C+ ++ +L I G + D T++ L+ C E+N
Sbjct: 823 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 882
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A D+ MT + ++ D + M++ L + ++ + +M + I+P+ Y LI+
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
GLC+ G I A+ + EM + + P + S+++ AL K D A L++ M ++P
Sbjct: 943 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 1002
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+ ++T L+ CK G + +A E+ + G LD+ +Y ++I GLC G A L
Sbjct: 1003 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062
Query: 303 SKMEDNGCTPDAVTYEIIIYALF-QEGDNDKAEKLLRQMIARGLL 346
+M+ +G +A TY+ +I L +E A+ +L+ ++ARG +
Sbjct: 1063 EEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 149/288 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++ K K V+ ++ LY ++ I PD +T +L+ G C L+ + +L +
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + D YTF++L+ C G++ A +++ VM G D T +++ +
Sbjct: 857 CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 916
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
++ + + M++ ++P+ + Y +INGLC++ + A + ++M I P V S+++
Sbjct: 917 ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 976
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
L K G+ +A L+ M L P + ++++L+ CKN +V A+ L M + G+
Sbjct: 977 RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 1036
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
D+ +Y +L+ GLC G + A E+++++ G+ + TY +I GL
Sbjct: 1037 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 189/367 (51%), Gaps = 39/367 (10%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A+ +Y+EML SP++ T+ L+ G G+ +A + + M + I+P+ T++IL+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
LC+ G +A+ + M G PD V +++L+DG+C + + +A ++ +
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
++ YS +I+GL + + A L+ M +NI PD++ Y+ LI GL K+G+I DA +L+
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
+ M S+G+ P+ Y++++ ALC ++ SL +M PD T+TIL+ +C+
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME----------- 306
G +++A+E+F ++ G + V T+ +I+GLCK G EA L+ KME
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 307 ----------------------------DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
D G +PD V+Y ++I + GD D A KLL
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 339 QMIARGL 345
+ +GL
Sbjct: 542 VLQLKGL 548
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 185/375 (49%), Gaps = 39/375 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ ++D L K +DA ++ +M + ISP+ VTYT LISG C G +A L +M
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD + L+D CK G++ EA +L + K G + YSSL+DG
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT 320
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +++ M + + PD+ Y+I+I GL K ++DAL L M ++ I+PD Y+++I
Sbjct: 321 QAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC G + + L EM P+ T++ L+ ++C+N V A + +++ G
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCS 440
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDL----------------------------LIK 273
P V T+ L+DGLCK G LK+A+ + + ++K
Sbjct: 441 PSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILK 500
Query: 274 GY-----------NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIY 322
Y + D+ +Y ++ING C+ G D AL L++ ++ G +PD+VTY +I
Sbjct: 501 AYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN 560
Query: 323 ALFQEGDNDKAEKLL 337
L + G ++A KL
Sbjct: 561 GLHRVGREEEAFKLF 575
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 182/348 (52%), Gaps = 9/348 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ +ID L +D + + E+ + +S D + LIS + +G ++AV +M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAV-----MIKGGEKPDVVTYSSLMDGYCL 116
PDV+T+++++ + +E E +LA M+K P++ T+ LMDG
Sbjct: 155 EFDCRPDVFTYNVILRVMMRE----EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
+ A+ +F+ MT ++P+ +Y+I+I+GLC+ DDA LF +M T PD V
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
+++L+DG CK GR+ +A+EL+ G + YSSL+D L + A L M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+ I PD+ YTIL+ GL K G+++DA ++ + KG + D Y +I LC GL +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
E +L +M + PDA T+ I+I ++ + G +AE++ ++ G
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 174/381 (45%), Gaps = 79/381 (20%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS++ID L + + A+ LY+ ML K I PD++ YT LI G G++++A+ LL+ M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 62 VKSINPDVY-----------------------------------TFSILVDALCKEGKVK 86
K I+PD Y T +IL+ ++C+ G V+
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI-------------------- 126
EA+ + + K G P V T+++L+DG C E+ +A +
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 127 ---FNTMTR--------MELA--------PDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
F+TM +LA PD+ SY+++ING C+ +D AL L +
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ ++PD VTY++LI+GL + GR +A++L P V Y SL+ C+ V
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKVLV 603
Query: 228 AISL-IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
A +L +K +K L D I + K G + A +L + L + YTI +
Sbjct: 604 AFNLWMKYLKKISCLDDETANEI--EQCFKEGETERALRRLIELDTRKDELTLGPYTIWL 661
Query: 287 NGLCKDGLFDEALALMSKMED 307
GLC+ G F EAL + S + +
Sbjct: 662 IGLCQSGRFHEALMVFSVLRE 682
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 144/279 (51%), Gaps = 9/279 (3%)
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 131
F +++D L ++ L + GG D + L+ Y + KA + F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 132 RMELAPDVQSYSIMINGLCKIKMVDD-----ALNLFKQMHTENITPDVVTYSSLIDGLCK 186
+ PDV +Y++++ ++ M ++ A ++ +M N +P++ T+ L+DGL K
Sbjct: 155 EFDCRPDVFTYNVIL----RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 187 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
GR SDA ++ ++M RG+ PN +TY+ L+ LC+ D+A L +M+ G PD
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
+ LLDG CK GR+ +A E+ + G+ L +R Y+ +I+GL + + +A L + M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 307 DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
PD + Y I+I L + G + A KLL M ++G+
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 167/394 (42%), Gaps = 73/394 (18%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I +LC L+ + +L EM PD T+T LI C G ++EA + ++
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG----------------------- 98
+P V TF+ L+D LCK G++KEA+ +L M G
Sbjct: 436 KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES 495
Query: 99 ----------------GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 142
G PD+V+Y+ L++G+C +++ A + N + L+PD +Y
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 143 SIMINGLCKIKMVDDALNLFKQ----MHTENITPDVVTYS-------------------- 178
+ +INGL ++ ++A LF H+ + ++T+S
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKI 615
Query: 179 --------SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 230
+ I+ K G A + E+ +R + Y+ L LC++ A+
Sbjct: 616 SCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALM 675
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
+ ++ + IL + L+ GLCK +L A EVF L + L R +++ L
Sbjct: 676 VFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLL 735
Query: 291 KDGLFDEALA-LMSKMEDNGCTPDA-VTYEIIIY 322
+ E ++ L ++ME G D+ + +EI+ Y
Sbjct: 736 ESTEKMEIVSQLTNRMERAGYNVDSMLRFEILKY 769
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 165/314 (52%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
P + L S +G L+EA+ ++M + P + + L+ K GK + K
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
MI G +P V TY+ ++D C +V A +F M L PD +Y+ MI+G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
+ +DD + F++M PDV+TY++LI+ CK G++ E EM GL PNV++
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
YS+L+DA CK + AI M+ G++P+ YTYT L+D CK G L DA + ++L
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
G +V TYT +I+GLC EA L KM+ G P+ +Y +I+ + + D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 332 KAEKLLRQMIARGL 345
+A +LL ++ RG+
Sbjct: 490 RALELLNELKGRGI 503
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 184/345 (53%), Gaps = 4/345 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++S +ID ++ +A +S+M R+ P + L+ F +G+ + M
Sbjct: 198 LFSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P V+T++I++D +CKEG V+ A+ + M G PD VTY+S++DG+ V +
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ F M M PDV +Y+ +IN CK + L +++M + P+VV+YS+L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+D CK G + A + +M GL PN TY+SL+DA CK ++ +A L +M G+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+V TYT L+DGLC R+K+A+E+F + G ++ +Y +I+G K D AL
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L+++++ G PD + Y I+ L + A+ ++ +M G+
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 199/381 (52%), Gaps = 36/381 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +ID +CK+ V A L+ EM + + PD VTY ++I GF VG+L + V +M
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PDV T++ L++ CK GK+ M G KP+VV+YS+L+D +C +
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M R+ L P+ +Y+ +I+ CKI + DA L +M + +VVTY++LI
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLC + R+ +A EL +M + G+ PN+ +Y++L+ K ++D A+ L+ ++K +GI
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDL--------------LIKGY------------ 275
PD+ Y + GLC +++ A+ V ++ L+ Y
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 276 -----NLDVR----TYTIMINGLCKDGLFDEALALMSKME-DNGCTPDAVTYEIIIYALF 325
LD+ T+ ++I+GLCK+ L +A+ +++ D G +A + +I L
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 326 QEGDNDKAEKLLRQMIARGLL 346
++ + A L QM+ +GL+
Sbjct: 625 KDNQVEAATTLFEQMVQKGLV 645
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 190/381 (49%), Gaps = 36/381 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YST++D+ CK+ ++ A Y +M + P+ TYT+LI C +G L +A L N+M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ +V T++ L+D LC ++KEA+ + M G P++ +Y++L+ G+ ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA----------------------- 158
+A ++ N + + PD+ Y I GLC ++ ++ A
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 159 ------------LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM-HSRGL 205
L+L +M +I VVT+ LIDGLCK+ +S A + N + + GL
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
N +++++D LCK++ V+ A +L ++M +G++PD YT L+DG K G + +A
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
+ + G LD+ YT ++ GL +A + + +M G PD V ++ +
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 326 QEGDNDKAEKLLRQMIARGLL 346
+ G D+A +L ++ LL
Sbjct: 730 ELGCIDEAVELQSYLMKHQLL 750
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 109/268 (40%), Gaps = 50/268 (18%)
Query: 129 TMTRMELAPDVQSYSI-------------------------------------------- 144
+MTR V+SY I
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 145 ------MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN 198
+ + L + M+++A+ F +M + P + + L+ K G+ D
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
+M G P V TY+ ++D +CK V+ A L ++MK +G++PD TY ++DG K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYE 318
RL D F+++ DV TY +IN CK G L +M+ NG P+ V+Y
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 319 IIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ A +EG +A K M GL+
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 10/249 (4%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y T I LC + + A + +EM I + + YTTL+ + G E + LL++M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVL-AVMIKGGEKPDVVTYSSLMDGYCLVNE 119
I V TF +L+D LCK V +A + + G + + +++++DG C N+
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
V A +F M + L PD +Y+ +++G K V +AL L +M + D++ Y+S
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH----VDNAISLIKK- 234
L+ GL ++ A + EM G+ P+ + S+L K H+ +D A+ L
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL----KKHYELGCIDEAVELQSYL 744
Query: 235 MKHQGILPD 243
MKHQ + D
Sbjct: 745 MKHQLLTSD 753
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 181/332 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T++ +C ++ AYN+ EM+A P+VV YTTLI F + +A+ +L +M
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I PD++ ++ L+ L K ++ EA++ L M++ G KP+ TY + + GY +E
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ M + P+ + +IN CK V +A + ++ M + I D TY+ L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GL K+ ++ DA E+ EM +G+ P+V +Y L++ K ++ A S+ +M +G+
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+V Y +LL G C+ G ++ A+E+ ++ +KG + + TY +I+G CK G EA L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+M+ G PD+ Y ++ + D ++A
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 186/345 (53%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY I + K+ ++ A L+ M+A + P Y +LI G+C +++ LL +M
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
++I YT+ +V +C G + A N++ MI G +P+VV Y++L+ + +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A + M +APD+ Y+ +I GL K K +D+A + +M + P+ TY +
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++ + A + V EM G+ PN + + L++ CK V A S + M QGI
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
L D TYT+L++GL K ++ DA+E+F+++ KG DV +Y ++ING K G +A +
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M + G TP+ + Y +++ + G+ +KA++LL +M +GL
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 197/416 (47%), Gaps = 75/416 (18%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I L K K +++A + EM+ + P+ TY ISG+ + A + +M
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+ + L++ CK+GKV EA + M+ G D TY+ LM+G ++V+
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
AE+IF M +APDV SY ++ING K+ + A ++F +M E +TP+V+ Y+ L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+SG I A EL++EM +GL PN +TY +++D CK+ + A L +MK +G++
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 242 PDVYTYTILLDGLC----------------------------------KGGRLKDAQEVF 267
PD + YT L+DG C K G+ + EV
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 268 QDLLIKGYNL-----DVRTYTIMINGLCKDGLFDEALALMSKMED--------------- 307
L+ ++ DV TY IMI+ LCK+G + A L +M++
Sbjct: 790 NRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 308 --------------------NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
G PD + Y +II A +EG KA L+ QM A+
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 196/349 (56%), Gaps = 10/349 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++ L K+ V+DA ++ EM K I+PDV +Y LI+GF +G +++A + ++MV
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + P+V +++L+ C+ G++++AK +L M G P+ VTY +++DGYC ++
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F+ M L PD Y+ +++G C++ V+ A+ +F + + +++LI
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALI 773
Query: 182 DGLCKSGRISDAWELVNEM----HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ + K G+ E++N + R PN +TY+ ++D LCK +++ A L +M++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
++P V TYT LL+G K GR + VF + + G D Y+++IN K+G+ +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 298 ALALMSKM-----EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
AL L+ +M D+GC T ++ + G+ + AEK++ M+
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 178/345 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I+ C++K V Y L EM + I TY T++ G C G L A ++ +M+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+V ++ L+ + + +A VL M + G PD+ Y+SL+ G ++
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A M L P+ +Y I+G + A K+M + P+ V + LI
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ CK G++ +A M +G+ + TY+ L++ L KN VD+A + ++M+ +GI
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV++Y +L++G K G ++ A +F +++ +G +V Y +++ G C+ G ++A L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ +M G P+AVTY II + GD +A +L +M +GL+
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 35/379 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +ID LCK K + DA +L EM + +S D TY+ LI G A GL+++MV
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
IN Y + + + KEG +++AK + MI G P Y+SL++GYC V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ ++ M + + +Y ++ G+C +D A N+ K+M P+VV Y++LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
++ R DA ++ EM +G+ P++ Y+SL+ L K +D A S + +M G+
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 242 PDVYTYTILLDG-----------------------------------LCKGGRLKDAQEV 266
P+ +TY + G CK G++ +A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
++ ++ +G D +TYT+++NGL K+ D+A + +M G PD +Y ++I +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 327 EGDNDKAEKLLRQMIARGL 345
G+ KA + +M+ GL
Sbjct: 640 LGNMQKASSIFDEMVEEGL 658
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 176/369 (47%), Gaps = 41/369 (11%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
V+ A L M+ K + P TY LI G C + +L++A LL +M ++ D +T+S+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE---VNKAEDIFNTMT 131
L+D L K AK ++ M+ G Y + C++++ + KA+ +F+ M
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI---CVMSKEGVMEKAKALFDGMI 374
Query: 132 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRIS 191
L P Q+Y+ +I G C+ K V L +M NI TY +++ G+C SG +
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 192 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
A+ +V EM + G PNV+ Y++L+ +N +A+ ++K+MK QGI PD++ Y L+
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY----------------------------- 282
GL K R+ +A+ +++ G + TY
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 283 ------TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
T +IN CK G EA + M D G DA TY +++ LF+ D AE++
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 337 LRQMIARGL 345
R+M +G+
Sbjct: 615 FREMRGKGI 623
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 168/372 (45%), Gaps = 58/372 (15%)
Query: 31 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKN 90
S D V + L G+ G ++EAV + + + + P + +L+DAL + ++ +
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207
Query: 91 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI-------FNTMTR----------- 132
V M++ DV TY L+ +C V +D+ F T T
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 133 ---MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
L P +Y ++I+GLCKIK ++DA +L +M + ++ D TYS LIDGL K GR
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GR 326
Query: 190 ISDAWE-LVNEMHSR-----------------------------------GLPPNVITYS 213
+DA + LV+EM S GL P Y+
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
SL++ C+ +V L+ +MK + I+ YTY ++ G+C G L A + ++++
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 274 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
G +V YT +I ++ F +A+ ++ +M++ G PD Y +I L + D+A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 334 EKLLRQMIARGL 345
L +M+ GL
Sbjct: 507 RSFLVEMVENGL 518
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 33/295 (11%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKG-------------------GEKPDVVTYSSLM 111
+FS L LC G ++A +V+ MI+ G+ D V + L
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 112 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 171
DGY + +A +F++ +EL P + ++++ L + +D +++K M N+
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 172 PDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
DV TY LI C++G + L +V+ + + + +VD A+ L
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQ-------------LGKDVL-FKTEKEFRTATLNVDGALKL 264
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
+ M +G++P YTY +L+DGLCK RL+DA+ + ++ G +LD TY+++I+GL K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
D A L+ +M +G Y+ I + +EG +KA+ L MIA GL+
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI 379
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +ID LCK+ + A L+ +M + P V+TYT+L++G+ +G+ E + ++ +
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM-----IKGGEKPDVVTYSSLMDGYCL 116
I PD +S++++A KEG +A ++ M + G K + T +L+ G+
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 150
V E+ AE + M R++ PD + +IN C
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 196/375 (52%), Gaps = 30/375 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YST ID+ CK + A + M +SP+VVT+T LI G+C G L+ AV L +M
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ +V T++ L+D CK+G+++ A+ + + M++ +P+ + Y++++DG+ + +
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A M + D+ +Y ++I+GLC + +A + + M ++ PD+V +++++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVIT------------------------------ 211
+ KSGR+ A + +++ RG P+V+
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
Y+ L+DALCK L K+ G++PD + YT + GLCK G L DA ++ ++
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
+G LD+ YT +I GL GL EA + +M ++G +PD+ ++++I A +EG+
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525
Query: 332 KAEKLLRQMIARGLL 346
A LL M RGL+
Sbjct: 526 AASDLLLDMQRRGLV 540
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 200/345 (57%), Gaps = 6/345 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++++ + K K++++ + +Y ++ K SP+VVTY+T I FC G+L+ A+ + M
Sbjct: 132 FNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMK 190
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+++P+V TF+ L+D CK G ++ A ++ M + +VVTY++L+DG+C E+
Sbjct: 191 RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ 250
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE++++ M + P+ Y+ +I+G + D+A+ +M + + D+ Y +I
Sbjct: 251 RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVII 310
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GLC +G++ +A E+V +M L P+++ ++++++A K+ + A+++ K+ +G
Sbjct: 311 SGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV + ++DG+ K G+L +A F I+ N DV YT++I+ LCK+G F E L
Sbjct: 371 PDVVALSTMIDGIAKNGQLHEAIVYF---CIEKAN-DV-MYTVLIDALCKEGDFIEVERL 425
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
SK+ + G PD Y I L ++G+ A KL +M+ GLL
Sbjct: 426 FSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 193/378 (51%), Gaps = 34/378 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+++++ +CK V A ++ M PDV++Y +LI G C G ++ A +L +
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 62 VKS---INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
PD+ +F+ L + K + E + VM+K P+VVTYS+ +D +C
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS-PNVVTYSTWIDTFCKSG 177
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
E+ A F++M R L+P+V +++ +I+G CK ++ A++L+K+M ++ +VVTY+
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+LIDG CK G + A E+ + M + PN + Y++++D + DNA+ + KM +Q
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G+ D+ Y +++ GLC G+LK+A E+ +D+ D+ +T M+N K G A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 299 LALMSKMEDNGCTPDAVT------------------------------YEIIIYALFQEG 328
+ + K+ + G PD V Y ++I AL +EG
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEG 417
Query: 329 DNDKAEKLLRQMIARGLL 346
D + E+L ++ GL+
Sbjct: 418 DFIEVERLFSKISEAGLV 435
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 186/374 (49%), Gaps = 47/374 (12%)
Query: 14 LVNDAYNLYSEMLAKRISPDVVTYT----TLISGFCIVGQLKEAVGLLNQMVVKSINPDV 69
+V +A S + PD T LI+ C + LK L +V + P
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLK----FLAYLVSRGYTPHR 56
Query: 70 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 129
+F+ +V +CK G+VK A++++ M + G +PDV++Y+SL+DG+C ++ A + +
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 130 MTRME---LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK 186
+ PD+ S++ + NG K+KM+D+ ++ + + +P+VVTYS+ ID CK
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCK 175
Query: 187 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
SG + A + + M L PNV+T++ L+D CK ++ A+SL K+M+ + +V T
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 247 YTILLDGLCKGGRLKDAQEVFQ-----------------------------------DLL 271
YT L+DG CK G ++ A+E++ +L
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
+G LD+ Y ++I+GLC +G EA ++ ME + PD V + ++ A F+ G
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 332 KAEKLLRQMIARGL 345
A + ++I RG
Sbjct: 356 AAVNMYHKLIERGF 369
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 146/274 (53%), Gaps = 5/274 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TIID + ++A ++ML + + D+ Y +ISG C G+LKEA ++ M
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD+ F+ +++A K G++K A N+ +I+ G +PDVV S+++DG ++
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A F +E A DV Y+++I+ LCK + LF ++ + PD Y+S
Sbjct: 390 HEAIVYFC----IEKANDVM-YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GLCK G + DA++L M GL +++ Y++L+ L + A + +M + GI
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
PD + +L+ K G + A ++ D+ +G
Sbjct: 505 SPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 128/243 (52%), Gaps = 5/243 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y II LC + + +A + +M + PD+V +TT+++ + G++K AV + ++++
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI 365
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PDV S ++D + K G++ EA + EK + V Y+ L+D C +
Sbjct: 366 ERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI-----EKANDVMYTVLIDALCKEGDFI 420
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ E +F+ ++ L PD Y+ I GLCK + DA L +M E + D++ Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GL G + +A ++ +EM + G+ P+ + L+ A K ++ A L+ M+ +G++
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Query: 242 PDV 244
V
Sbjct: 541 TAV 543
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+ +ID+LCK+ + L+S++ + PD YT+ I+G C G L +A L +M
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + + D+ ++ L+ L +G + EA+ V M+ G PD + L+ Y +
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNM 524
Query: 121 NKAEDIFNTMTRMELAPDVQ 140
A D+ M R L V
Sbjct: 525 AAASDLLLDMQRRGLVTAVS 544
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 183/343 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I L K + +A +Y M+ + P + TY++L+ G + +GLL +M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+VYTF+I + L + GK+ EA +L M G PDVVTY+ L+D C +++
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+++F M PD +Y +++ + +D + +M + PDVVT++ L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D LCK+G +A++ ++ M +G+ PN+ TY++L+ L + H +D+A+ L M+ G+
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVK 430
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P YTY + +D K G A E F+ + KG ++ + L K G EA +
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
++D G PD+VTY +++ + G+ D+A KLL +M+ G
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 185/374 (49%), Gaps = 35/374 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +ID+LC + ++ A ++ +M R PD VTY TL+ F L ++M
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PDV TF+ILVDALCK G EA + L VM G P++ TY++L+ G V+ ++
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++F M + + P +Y + I+ K AL F++M T+ I P++V ++ +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 182 DGLCKSGR-----------------------------------ISDAWELVNEMHSRGLP 206
L K+GR I +A +L++EM G
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P+VI +SL++ L K VD A + +MK + P V TY LL GL K G++++A E+
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
F+ ++ KG + T+ + + LCK+ AL ++ KM D GC PD TY II+ L +
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 655
Query: 327 EGDNDKAEKLLRQM 340
G +A QM
Sbjct: 656 NGQVKEAMCFFHQM 669
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 171/341 (50%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++++L D + + ++ M + I D TY T+ + G LK+A L +M
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+ Y+++ L+ L K EA V MI G +P + TYSSLM G +++
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+ M + L P+V +++I I L + +++A + K+M E PDVVTY+ LID L
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
C + ++ A E+ +M + P+ +TY +LLD N +D+ +M+ G +PDV
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
T+TIL+D LCK G +A + + +G ++ TY +I GL + D+AL L
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
ME G P A TY + I + GD+ A + +M +G+
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 163/288 (56%), Gaps = 2/288 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL-NQM 60
Y+ ++D+ K +++ + LY EM + +T+ +ISG G + +A+ L + M
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ +P T+ L+D L K G++ EAK + M+ G +P+ Y+ L++G+ E
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A +F M + + PD+++YS++++ LC + VD+ L+ FK++ + PDVV Y+ +
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 181 IDGLCKSGRISDAWELVNEMH-SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
I+GL KS R+ +A L NEM SRG+ P++ TY+SL+ L V+ A + +++ G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
+ P+V+T+ L+ G G+ + A V+Q ++ G++ + TY + N
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 158/284 (55%), Gaps = 2/284 (0%)
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
+ P + T+++L+ L + ++ A++V + G PDV TY+ L+D Y ++++
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ-MHTENITPDVVTYSSLID 182
+++ M+ E + +++I+I+GL K VDDAL+L+ M + +P TY LID
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
GL KSGR+ +A +L M G PN Y+ L++ K D A +L K+M +G+ P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D+ TY++L+D LC GR+ + F++L G N DV Y ++INGL K +EAL L
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 303 SKME-DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++M+ G TPD TY +I L G ++A K+ ++ GL
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 163/319 (51%), Gaps = 2/319 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I L + ++ A +++ ++ + PDV TY L+ + G++ E L +M
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMS 847
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEV 120
+ T +I++ L K G V +A ++ ++ + P TY L+DG +
Sbjct: 848 THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL 907
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A+ +F M P+ Y+I+ING K D A LFK+M E + PD+ TYS L
Sbjct: 908 YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 967
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK-HQG 239
+D LC GR+ + E+ GL P+V+ Y+ +++ L K+H ++ A+ L +MK +G
Sbjct: 968 VDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG 1027
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
I PD+YTY L+ L G +++A +++ ++ G +V T+ +I G G + A
Sbjct: 1028 ITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
Query: 300 ALMSKMEDNGCTPDAVTYE 318
A+ M G +P+ TYE
Sbjct: 1088 AVYQTMVTGGFSPNTGTYE 1106
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 1/315 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++D+LCK +A++ M + I P++ TY TLI G V +L +A+ L M
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P YT+ + +D K G A M G P++V ++ +
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A+ IF + + L PD +Y++M+ K+ +D+A+ L +M PDV+ +SLI
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ L K+ R+ +AW++ M L P V+TY++LL L KN + AI L + M +G
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ T+ L D LCK + A ++ ++ G DV TY +I GL K+G EA+
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 302 MSKMEDNGCTPDAVT 316
+M+ PD VT
Sbjct: 666 FHQMK-KLVYPDFVT 679
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 9/349 (2%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRI-SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
T++ + K L+ DAY + + L P + + LI + AV ++V
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 741
Query: 63 KSINPDVYTFSILVDAL---CKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVN 118
I D SILV + CK V A+ + K G +P + TY+ L+ G +
Sbjct: 742 NGICRD--GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+ A+D+F + PDV +Y+ +++ K +D+ L+K+M T + +T++
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 179 SLIDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+I GL K+G + DA +L ++ S R P TY L+D L K+ + A L + M
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
G P+ Y IL++G K G A +F+ ++ +G D++TY+++++ LC G DE
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM-IARGL 345
L +++++G PD V Y +II L + ++A L +M +RG+
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 167/344 (48%), Gaps = 3/344 (0%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
II CK V+ A L+ + + P + TY LI G ++ A + Q+
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
PDV T++ L+DA K GK+ E + M + + +T++ ++ G V+ A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 124 EDIF-NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
D++ + M+ + +P +Y +I+GL K + +A LF+ M P+ Y+ LI+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G K+G A L M G+ P++ TYS L+D LC VD + K++K G+ P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLI-KGYNLDVRTYTIMINGLCKDGLFDEALAL 301
DV Y ++++GL K RL++A +F ++ +G D+ TY +I L G+ +EA +
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++++ G P+ T+ +I G + A + + M+ G
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 142/276 (51%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
T + +++AL +GK++E V +M K K D TY ++ + + +A M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
+ SY+ +I+ L K + +A+ ++++M E P + TYSSL+ GL K I
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 191 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL 250
L+ EM + GL PNV T++ + L + ++ A ++K+M +G PDV TYT+L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 251 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 310
+D LC +L A+EVF+ + + D TY +++ + D S+ME +G
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 311 TPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
PD VT+ I++ AL + G+ +A L M +G+L
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 1/247 (0%)
Query: 95 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT-RMELAPDVQSYSIMINGLCKIK 153
MI+ KPD+ + + G + + + F ++ + L ++ + M+ L
Sbjct: 73 MIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDG 132
Query: 154 MVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 213
+++ +F M I D TY ++ L G + A + +M G N +Y+
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
L+ L K+ A+ + ++M +G P + TY+ L+ GL K + + +++
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 274 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
G +V T+TI I L + G +EA ++ +M+D GC PD VTY ++I AL D A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 334 EKLLRQM 340
+++ +M
Sbjct: 313 KEVFEKM 319
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I+ K + A L+ M+ + + PD+ TY+ L+ C+VG++ E + ++
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM-IKGGEKPDVVTYSSLMDGYCLVNE 119
+NPDV ++++++ L K +++EA + M G PD+ TY+SL+ +
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
V +A I+N + R L P+V +++ +I G + A +++ M T +P+ TY
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 180 L 180
L
Sbjct: 1108 L 1108
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSL 180
K+ D +M R PD+ S + GL D + + FK + N+ T + +
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++ L G++ + + + M R + + TY ++ +L + A ++KM+ G
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ + Y+Y L+ L K +A EV++ ++++G+ ++TY+ ++ GL K D +
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L+ +ME G P+ T+ I I L + G ++A ++L++M G
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 178/345 (51%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+++I + D + +Y +M+ + SPD+ T + G+ ++ + ++
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD ++SIL+ L K G E + M + G D Y+ ++DG+C +V
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
NKA + M P V +Y +I+GL KI +D+A LF++ ++ I +VV YSSL
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
IDG K GRI +A+ ++ E+ +GL PN+ T++SLLDAL K ++ A+ + MK
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ TY IL++GLCK + A +Q++ +G +YT MI+GL K G EA A
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L + + NG PD+ Y +I L A L + RGL
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 185/344 (53%), Gaps = 1/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I LCK +++A ++ + R P Y T+I G+ G+ EA LL +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P V ++ ++ L K GKV EA V M K P++ TY+ L+D C +++
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLD 394
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ ++M + L P+V++ +IM++ LCK + +D+A +F++M + TPD +T+ SLI
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGL K GR+ DA+++ +M N I Y+SL+ + ++ + K M +Q
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ +D + K G + + +F+++ + + D R+Y+I+I+GL K G +E L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M++ GC D Y I+I + G +KA +LL +M +G
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 180/341 (52%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++D LCK + +++A ++ EM K +PD +T+ +LI G VG++ +A + +M+
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+ ++ L+ G+ ++ + MI PD+ ++ MD E K
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+F + PD +SYSI+I+GL K ++ LF M + D Y+ +IDG
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
CK G+++ A++L+ EM ++G P V+TY S++D L K +D A L ++ K + I +V
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
Y+ L+DG K GR+ +A + ++L+ KG ++ T+ +++ L K +EAL
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M++ CTP+ VTY I+I L + +KA ++M +G+
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 167/327 (51%), Gaps = 1/327 (0%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+ + Y++ M + P YTTLI F V + L QM P V+ F+
Sbjct: 149 LREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTT 208
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L+ KEG+V A ++L M D+V Y+ +D + V +V+ A F+ +
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
L PD +Y+ MI LCK +D+A+ +F+ + P Y+++I G +G+ +A+
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
L+ ++G P+VI Y+ +L L K VD A+ + ++MK P++ TY IL+D L
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDML 387
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
C+ G+L A E+ + G +VRT IM++ LCK DEA A+ +M+ CTPD
Sbjct: 388 CRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMI 341
+T+ +I L + G D A K+ +M+
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKML 474
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 177/340 (52%), Gaps = 1/340 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I + + L+ +M P V +TTLI GF G++ A+ LL++M
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
S++ D+ +++ +D+ K GKV A + G KPD VTY+S++ C N ++
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++F + + P +Y+ MI G D+A +L ++ + P V+ Y+ ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
L K G++ +A ++ EM + PN+ TY+ L+D LC+ +D A L M+ G+
Sbjct: 351 TCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+V T I++D LCK +L +A +F+++ K D T+ +I+GL K G D+A +
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
KM D+ C +++ Y +I F G + K+ + MI
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 179/343 (52%), Gaps = 1/343 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++T+I K+ V+ A +L EM + + D+V Y I F VG++ A +++
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD T++ ++ LCK ++ EA + + K P Y++++ GY +
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A + P V +Y+ ++ L K+ VD+AL +F++M ++ P++ TY+ L
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNIL 383
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
ID LC++G++ A+EL + M GL PNV T + ++D LCK+ +D A ++ ++M ++
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD T+ L+DGL K GR+ DA +V++ +L + YT +I G ++
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+ M + C+PD + +F+ G+ +K + ++ AR
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKAR 546
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 163/308 (52%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I L K N+ Y L+ M + D Y +I GFC G++ +A LL +M
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P V T+ ++D L K ++ EA + + +VV YSSL+DG+ V ++
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I + + L P++ +++ +++ L K + +++AL F+ M TP+ VTY LI
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GLCK + + A+ EM +G+ P+ I+Y++++ L K ++ A +L + K G +
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD Y +++GL G R DA +F++ +G + +T ++++ L K+ ++A +
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854
Query: 302 MSKMEDNG 309
+ + + G
Sbjct: 855 GAVLRETG 862
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 178/345 (51%), Gaps = 13/345 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I ++AY+L AK P V+ Y +++ +G++ EA+ + +M
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P++ T++IL+D LC+ GK+ A + M K G P+V T + ++D C +++
Sbjct: 371 -KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F M PD ++ +I+GL K+ VDDA ++++M + + + Y+SLI
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GR D ++ +M ++ P++ ++ +D + K + ++ +++K + +
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD +Y+IL+ GL K G + E+F + +G LD R Y I+I+G CK G ++A L
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 302 MSKMEDNGCTPDAVTYEIII------------YALFQEGDNDKAE 334
+ +M+ G P VTY +I Y LF+E + + E
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 166/332 (50%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +ID LC+ ++ A+ L M + P+V T ++ C +L EA + +M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K PD TF L+D L K G+V +A V M+ + + + Y+SL+ +
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
I+ M +PD+Q + ++ + K + +F+++ PD +YS LI
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GL K+G ++ +EL M +G + Y+ ++D CK V+ A L+++MK +G
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P V TY ++DGL K RL +A +F++ K L+V Y+ +I+G K G DEA +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+ ++ G TP+ T+ ++ AL + + ++A
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 144/291 (49%), Gaps = 1/291 (0%)
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
+L +M V P V T +V K K++E +V+ +M K +P Y++L+ +
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
VN + +F M + P V ++ +I G K VD AL+L +M + ++ D+V
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
Y+ ID K G++ AW+ +E+ + GL P+ +TY+S++ LCK + +D A+ + + +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
+ +P Y Y ++ G G+ +A + + KG V Y ++ L K G
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
DEAL + +M+ + P+ TY I+I L + G D A +L M GL
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 112/278 (40%), Gaps = 37/278 (13%)
Query: 67 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 126
P+ Y +LV A C+ +L M G P V T ++ G N++ + D+
Sbjct: 98 PESYNSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDV 155
Query: 127 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK 186
M + + P +Y+ +I + D L LF+QM
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ-------------------- 195
Query: 187 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
EL G P V +++L+ K VD+A+SL+ +MK + D+
Sbjct: 196 --------EL-------GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVL 240
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
Y + +D K G++ A + F ++ G D TYT MI LCK DEA+ + +E
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 307 DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
N P Y +I G D+A LL + A+G
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 117 VNEVNKAEDIFNTM-TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
+ +VN+A + F R EL +SY+ ++ + + + D + +M P V
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
T ++ G K+ ++ + +++V M P Y++L+ A +H D ++L ++M
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
+ G P V+ +T L+ G K GR+ A + ++ + D+ Y + I+ K G
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
D A ++E NG PD VTY +I L + D+A ++ +
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 189/379 (49%), Gaps = 37/379 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA-------- 53
Y+ +++ L V+ A ++ M + RI PD+VTY T+I G+C GQ ++A
Sbjct: 225 YNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDME 284
Query: 54 ---------------------------VGLLNQMVVKSINPDVYTFSILVDALCKEGKVK 86
V L +M K I + FS+++ LCKEGK+
Sbjct: 285 TRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLN 344
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
E V MI+ G KP+V Y+ L+DGY V A + + M PDV +YS+++
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
NGLCK V++AL+ F + + + + YSSLIDGL K+GR+ +A L EM +G
Sbjct: 405 NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 464
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
+ Y++L+DA K+ VD AI+L K+M + +G VYTYTILL G+ K R ++A +
Sbjct: 465 RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK 524
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
++ ++ KG + + GLC G A ++ ++ G DA E +I L
Sbjct: 525 LWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLC 583
Query: 326 QEGDNDKAEKLLRQMIARG 344
+ G +A KL + RG
Sbjct: 584 KAGRIKEACKLADGITERG 602
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 187/380 (49%), Gaps = 36/380 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +++D L K V+ + SE+ V LI F +G ++E + + +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I P +YT++ L++ L V A+ V VM G KPD+VTY++++ GYC +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 122 KA-EDIFNTMTRMELAPDV----------------------------------QSYSIMI 146
KA E + + TR A + ++S++I
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
GLCK +++ +F+ M + P+V Y+ LIDG KSG + DA L++ M G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P+V+TYS +++ LCKN V+ A+ + G+ + Y+ L+DGL K GR+ +A+ +
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM-EDNGCTPDAVTYEIIIYALF 325
F+++ KG D Y +I+ K DEA+AL +M E+ GC TY I++ +F
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Query: 326 QEGDNDKAEKLLRQMIARGL 345
+E N++A KL MI +G+
Sbjct: 515 KEHRNEEALKLWDMMIDKGI 534
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 165/302 (54%), Gaps = 2/302 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S +I LCK+ +N+ Y ++ M+ K P+V YT LI G+ G +++A+ LL++M+
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PDV T+S++V+ LCK G+V+EA + G + + YSSL+DG V+
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSL 180
+AE +F M+ D Y+ +I+ K + VD+A+ LFK+M E V TY+ L
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ G+ K R +A +L + M +G+ P + +L LC + V A ++ ++ G+
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ D +++ LCK GR+K+A ++ + +G + R T+MIN L K G D A+
Sbjct: 570 ILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMK 628
Query: 301 LM 302
LM
Sbjct: 629 LM 630
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 135/291 (46%), Gaps = 21/291 (7%)
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGE---KPDVV------------------TYSSLMDGY 114
+D C++ +K + N ++ ++K E KPD+ Y SL+D
Sbjct: 103 LDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVL 162
Query: 115 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
L +V++ + + + + E V + + +I K+ MV++ L ++++M I P +
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
TY+ L++GL + + A + M S + P+++TY++++ CK A+ ++
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 294
M+ +G D TY ++ ++Q++ KG + ++++I GLCK+G
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 295 FDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+E + M G P+ Y ++I + G + A +LL +MI G
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 184/344 (53%), Gaps = 2/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y TI+ LCK+K + + +L +M + + PD VTY TLI EA+ L
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA 409
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNE 119
K D +S +V ALCKEG++ EAK+++ M+ KG PDVVTY+++++G+C + E
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
V+KA+ + M P+ SY+ ++NG+C+ +A + +P+ +TYS
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
++ GL + G++S+A ++V EM +G P + + LL +LC++ A +++ ++G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+V +T ++ G C+ L A V D+ + + DV TYT +++ L K G EA
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
LM KM G P VTY +I+ Q G D +L +MI+R
Sbjct: 650 ELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 195/380 (51%), Gaps = 37/380 (9%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+T ID + + A M I P+VVTY +I G+C + +++EA+ LL M
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK-GGEKPDVVTYSSLMD--------- 112
K PD ++ ++ LCKE ++ E ++++ M K G PD VTY++L+
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400
Query: 113 -------------------GY-------CLVNEVNKAEDIFNTM-TRMELAPDVQSYSIM 145
GY C +++A+D+ N M ++ PDV +Y+ +
Sbjct: 401 EALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460
Query: 146 INGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
+NG C++ VD A L + MHT P+ V+Y++L++G+C++G+ +A E++N
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 520
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
PN ITYS ++ L + + A ++++M +G P +LL LC+ GR +A++
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
++ L KG ++V +T +I+G C++ D AL+++ M D TY ++ L
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 326 QEGDNDKAEKLLRQMIARGL 345
++G +A +L+++M+ +G+
Sbjct: 641 KKGRIAEATELMKKMLHKGI 660
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 189/348 (54%), Gaps = 2/348 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y ++++ L K KL + + M + I ++ ++ + GQL++A+ +L M
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P++ + +D + ++++A L M G P+VVTY+ ++ GYC ++ V
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRV 328
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN-ITPDVVTYSS 179
+A ++ M PD SY ++ LCK K + + +L K+M E+ + PD VTY++
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LI L K +A + + +G + + YS+++ ALCK + A LI +M +G
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 240 -ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
PDV TYT +++G C+ G + A+++ Q + G+ + +YT ++NG+C+ G EA
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+M+ E++ +P+++TY +I++ L +EG +A ++R+M+ +G
Sbjct: 509 REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 556
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 176/343 (51%), Gaps = 2/343 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++ C+ V+ A L M P+ V+YT L++G C G+ EA ++N
Sbjct: 457 YTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE 516
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+P+ T+S+++ L +EGK+ EA +V+ M+ G P V + L+ C +
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTH 576
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A A +V +++ +I+G C+ +D AL++ M+ N DV TY++L+
Sbjct: 577 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 636
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D L K GRI++A EL+ +M +G+ P +TY +++ C+ VD+ +++++KM +
Sbjct: 637 DTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC 696
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+Y I + LC G+L++A + +L D +T ++ G K G+ A +
Sbjct: 697 RTIYNQVI--EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKV 754
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+M + PD E + L +G D+A+KL+ +++ RG
Sbjct: 755 ACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 148/281 (52%), Gaps = 4/281 (1%)
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
+P VY +S+L + L K + ++ VL +M + G +S +M Y ++ A
Sbjct: 206 DPMVY-YSML-EVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+ M R + P++ + I+ + ++ AL ++M I P+VVTY+ +I G C
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPDV 244
R+ +A EL+ +MHS+G P+ ++Y +++ LCK + L+KKM K G++PD
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQ 383
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
TY L+ L K +A +D KG+ +D Y+ +++ LCK+G EA L+++
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 305 MEDNG-CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
M G C PD VTY ++ + G+ DKA+KLL+ M G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 196/347 (56%), Gaps = 1/347 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+ ++ + C+ K ++ A +++SEML K + P+ TY+ LI GF + A ++NQM
Sbjct: 486 FYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM 545
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGYCLVNE 119
+ + ++ +++ LCK G+ +AK +L +IK +Y+S++DG+ V +
Sbjct: 546 NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGD 605
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ A + + M+ +P+V +++ +ING CK +D AL + +M + + D+ Y +
Sbjct: 606 TDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGA 665
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LIDG CK + A+ L +E+ GL PNV Y+SL+ +D AI L KKM + G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
I D++TYT ++DGL K G + A +++ +LL G D + +++NGL K G F +A
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKAS 785
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ +M+ TP+ + Y +I +EG+ ++A +L +M+ +G++
Sbjct: 786 KMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 195/411 (47%), Gaps = 72/411 (17%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
M+S +++ CK+ + A Y M + RI+P V T+I G C+ + EA +
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFND 440
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+S + + + CK+GKV A + L +M + G +P+VV Y+++M +C + +
Sbjct: 441 SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM 500
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A IF+ M L P+ +YSI+I+G K K +A ++ QM+ N + V Y+++
Sbjct: 501 DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI 560
Query: 181 IDGLCKSGRISDAWELVN------------------------------------EMHSRG 204
I+GLCK G+ S A E++ EM G
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
PNV+T++SL++ CK++ +D A+ + +MK + D+ Y L+DG CK +K A
Sbjct: 621 KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAY 680
Query: 265 EVFQDL--------------LIKGY-NL--------------------DVRTYTIMINGL 289
+F +L LI G+ NL D+ TYT MI+GL
Sbjct: 681 TLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL 740
Query: 290 CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
KDG + A L S++ D G PD + + +++ L ++G KA K+L +M
Sbjct: 741 LKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 176/321 (54%), Gaps = 1/321 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +ID K+K +A+++ ++M A + V Y T+I+G C VGQ +A +L ++
Sbjct: 522 YSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Query: 62 V-KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + +++ ++D K G A M + G+ P+VVT++SL++G+C N +
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A ++ + M MEL D+ +Y +I+G CK + A LF ++ + P+V Y+SL
Sbjct: 642 DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G G++ A +L +M + G+ ++ TY++++D L K+ +++ A L ++ GI
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGI 761
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+PD + +L++GL K G+ A ++ +++ K +V Y+ +I G ++G +EA
Sbjct: 762 VPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFR 821
Query: 301 LMSKMEDNGCTPDAVTYEIII 321
L +M + G D + +++
Sbjct: 822 LHDEMLEKGIVHDDTVFNLLV 842
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 176/370 (47%), Gaps = 36/370 (9%)
Query: 11 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK-SINPDV 69
+++ +A ++ ++++ PD + ++ + C L A+ LL +M K +
Sbjct: 251 RERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 70 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 129
T++ ++ A KEG ++EA V+ M+ G V+ +SL++GYC NE+ KA D+FN
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG------ 183
M LAPD +S+M+ CK ++ A+ + +M + I P V ++I G
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 184 ----------------------------LCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
CK G++ A + M +G+ PNV+ Y+++
Sbjct: 431 PEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNM 490
Query: 216 LDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
+ A C+ ++D A S+ +M +G+ P+ +TY+IL+DG K ++A +V + +
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKM-EDNGCTPDAVTYEIIIYALFQEGDNDKAE 334
+ Y +INGLCK G +A ++ + ++ + +Y II + GD D A
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 335 KLLRQMIARG 344
+ R+M G
Sbjct: 611 ETYREMSENG 620
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 172/341 (50%), Gaps = 4/341 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I + K+ + +A + EM+ I V+ T+L++G+C +L +A+ L N+M
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + PD FS++V+ CK ++++A M P V +++ G CL E
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESP 431
Query: 122 KAE-DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A +IFN +A I + CK VD A + K M + I P+VV Y+++
Sbjct: 432 EAALEIFNDSFESWIAHGFMCNKIFL-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNM 490
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ C+ + A + +EM +GL PN TYS L+D KN NA +I +M
Sbjct: 491 MLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNF 550
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI-KGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ Y +++GLCK G+ A+E+ Q+L+ K Y++ +Y +I+G K G D A+
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M +NG +P+ VT+ +I + D A ++ +M
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 159/289 (55%), Gaps = 1/289 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLA-KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+Y+TII+ LCK + A + ++ KR S +Y ++I GF VG AV +
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M +P+V TF+ L++ CK ++ A + M K D+ Y +L+DG+C N+
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ A +F+ + + L P+V Y+ +I+G + +D A++L+K+M + I+ D+ TY++
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+IDGL K G I+ A +L +E+ G+ P+ I + L++ L K A ++++MK +
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
+ P+V Y+ ++ G + G L +A + ++L KG D + ++++G
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 158/358 (44%), Gaps = 37/358 (10%)
Query: 23 SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKE 82
S+ ++P Y L++ + ++ AV MV + + P V + ++ +L +
Sbjct: 160 SKRFGFELTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRS 217
Query: 83 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 142
+ EAK + M+ G D VT LM + +A IF + PD +
Sbjct: 218 NLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLF 277
Query: 143 SIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSLIDGLCKSGRISDAWELVNEMH 201
S+ + CK + AL+L ++M + + TY+S+I K G + +A +++EM
Sbjct: 278 SLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
Query: 202 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
G+P +VI +SL++ CK + + A+ L +M+ +G+ PD ++++++ CK ++
Sbjct: 338 GFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEME 397
Query: 262 DAQEVFQDL--------------LIKG-------------YNLDVRTYT---IMINGL-- 289
A E + + +I+G +N ++ M N +
Sbjct: 398 KAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL 457
Query: 290 --CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
CK G D A + + ME G P+ V Y ++ A + + D A + +M+ +GL
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 177/323 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++ K+ ++DA L+ EM + I DV YT+LIS C G +K A L +++
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K ++P YT+ L+D +CK G++ A+ ++ M G V +++L+DGYC V+
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD 416
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I++ M + DV + + + + ++K D+A +M + V+Y++LI
Sbjct: 417 EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLI 476
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D CK G + +A L EM S+G+ PN ITY+ ++ A CK + A L M+ G+
Sbjct: 477 DVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMD 536
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD YTYT L+ G C + +A +F ++ +KG + + TYT+MI+GL K G DEA L
Sbjct: 537 PDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGL 596
Query: 302 MSKMEDNGCTPDAVTYEIIIYAL 324
+M+ G T D Y +I ++
Sbjct: 597 YDEMKRKGYTIDNKVYTALIGSM 619
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 177/335 (52%)
Query: 11 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVY 70
K + ++ ++ M+ + V + T ++ G C G+++++ L+ + VK I P+ Y
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
T++ +++A K+ + VL VM K G + VTY+ LM+ +++ AE +F+ M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
+ DV Y+ +I+ C+ + A LF ++ + ++P TY +LIDG+CK G +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 191 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL 250
A L+NEM S+G+ + +++L+D C+ VD A + M+ +G DV+T +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 251 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 310
+ R +A++ ++ G L +YT +I+ CK+G +EA L +M G
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 311 TPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
P+A+TY ++IYA ++G +A KL M A G+
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 159/289 (55%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+++I C+ + A+ L+ E+ K +SP TY LI G C VG++ A L+N+M
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K +N F+ L+D C++G V EA + VM + G + DV T +++ + +
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ M + SY+ +I+ CK V++A LF +M ++ + P+ +TY+ +
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I CK G+I +A +L M + G+ P+ TY+SL+ C +VD A+ L +M +G+
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
+ TYT+++ GL K G+ +A ++ ++ KGY +D + YT +I +
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 173/343 (50%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +++ LC+ V + L E K I P+ TY T+I+ + G+L M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ + T+++L++ K GK+ +A+ + M + G + DV Y+SL+ C + +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A +F+ +T L+P +Y +I+G+CK+ + A L +M ++ + V +++LID
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G C+ G + +A + + M +G +V T +++ + D A + +M G+
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+YT L+D CK G +++A+ +F ++ KG + TY +MI CK G EA L
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ ME NG PD+ TY +I+ + D+A +L +M +GL
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 180/343 (52%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+TII++ K + + + M + + VTYT L+ G++ +A L ++M
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I DV+ ++ L+ C++G +K A + + + G P TY +L+DG C V E+
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
AE + N M + ++ +I+G C+ MVD+A ++ M + DV T +++
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ R +A + + M G+ + ++Y++L+D CK +V+ A L +M +G+
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ TY +++ CK G++K+A+++ ++ G + D TYT +I+G C DEA+ L
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL 561
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
S+M G ++VTY ++I L + G +D+A L +M +G
Sbjct: 562 FSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 150/298 (50%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 107
G +E + + + MV K ++ D + + + A K ++ + M+ G K V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 108 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+ +++G C EV K++ + + + P+ +Y+ +IN K + + K M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ + + VTY+ L++ K+G++SDA +L +EM RG+ +V Y+SL+ C+ ++
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A L ++ +G+ P YTY L+DG+CK G + A+ + ++ KG N+ + +I+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G C+ G+ DEA + ME G D T I + D+A++ L +M+ G+
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%)
Query: 187 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
+G + + + M +GL + + L A K +D + + ++M G+ VY+
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 306
TI+++GLC+ G ++ ++++ ++ +KG + TY +IN K F ++ M+
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 307 DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+G + VTY +++ + G AEKL +M RG+
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGI 325
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 157 DALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY--SS 214
D L ++ + N+ PD+ +L L + R ++ L+N + + G + S+
Sbjct: 81 DFFKLLREFES-NLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSA 139
Query: 215 LLDA---------------LCKNHHVDNA-----ISLIKKMKHQGILPDVYTYTILLDGL 254
++D L +VDN + + M +G+ D + + L
Sbjct: 140 MVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAA 199
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
K R+ E+F+ ++ G + V + TI++ GLC+ G +++ L+ + G P+A
Sbjct: 200 KKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEA 259
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
TY II A ++ D E +L+ M G++
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 186/385 (48%), Gaps = 41/385 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I LC+D + +A+ +Y ++L + + P +VTY++LI GFC G L+ L M+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PDV + +LVD L K+G + A M+ + +VV ++SL+DG+C +N +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 122 KAEDIFNTMTRMELAPDVQSY------SIMINGLCK------------------------ 151
+A +F M + PDV ++ SIM + CK
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIA 573
Query: 152 -----------IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
++DA F + + PD+VTY+++I G C R+ +A + +
Sbjct: 574 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 633
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
PN +T + L+ LCKN+ +D AI + M +G P+ TY L+D K +
Sbjct: 634 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+ + ++F+++ KG + + +Y+I+I+GLCK G DEA + + D PD V Y I+
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753
Query: 321 IYALFQEGDNDKAEKLLRQMIARGL 345
I + G +A L M+ G+
Sbjct: 754 IRGYCKVGRLVEAALLYEHMLRNGV 778
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 200/420 (47%), Gaps = 76/420 (18%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ-- 59
+ T+I+ CK ++ A++L+ M + I PD++ Y+TLI G+ G L L +Q
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 60 ---------------------------------MVVKSINPDVYTFSILVDALCKEGKVK 86
M+ + I+P+V T++IL+ LC++G++
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
EA + ++K G +P +VTYSSL+DG+C + ++ M +M PDV Y +++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
+GL K ++ A+ +M ++I +VV ++SLIDG C+ R +A ++ M G+
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 207 PNVITYSSLL------DALCKN-----------------------------------HHV 225
P+V T+++++ DA CK+ H +
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 588
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
++A + + PD+ TY ++ G C RL +A+ +F+ L + + + T TI+
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
I+ LCK+ D A+ + S M + G P+AVTY ++ + D + + KL +M +G+
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 168/330 (50%), Gaps = 6/330 (1%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A L S +L +P+VVT+ TLI+GFC G++ A L M + I PD+ +S L+D
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
K G + + + + G K DVV +SS +D Y ++ A ++ M ++P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
+V +Y+I+I GLC+ + +A ++ Q+ + P +VTYSSLIDG CK G + + L
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
+M G PP+V+ Y L+D L K + +A+ KM Q I +V + L+DG C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYT------IMINGLCKDGLFDEALALMSKMEDNGCT 311
R +A +VF+ + I G DV T+T IM + CK L L M+ N +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKIS 569
Query: 312 PDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
D ++I+ LF+ + A K +I
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 41/319 (12%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y ++D L K L+ A +ML + I +VV + +LI G+C + + EA+ + M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 61 VVKSINPDVYTF------SILVDALCKEGK------------------------------ 84
+ I PDV TF SI+ DA CK K
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 85 -----VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 139
+++A +I+G +PD+VTY++++ GYC + +++AE IF + P+
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 140 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNE 199
+ +I+I+ LCK +D A+ +F M + P+ VTY L+D KS I +++L E
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 200 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGR 259
M +G+ P++++YS ++D LCK VD A ++ + +LPDV Y IL+ G CK GR
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Query: 260 LKDAQEVFQDLLIKGYNLD 278
L +A +++ +L G D
Sbjct: 763 LVEAALLYEHMLRNGVKPD 781
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 174/321 (54%), Gaps = 3/321 (0%)
Query: 2 YSTIIDSL-CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ ++D+L CK + V A + + ++ + +V+ ++ G V Q++ A LL+ +
Sbjct: 220 HGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLV 277
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P+V TF L++ CK G++ A ++ VM + G +PD++ YS+L+DGY +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+F+ + DV +S I+ K + A ++K+M + I+P+VVTY+ L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GLC+ GRI +A+ + ++ RG+ P+++TYSSL+D CK ++ + +L + M G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PDV Y +L+DGL K G + A +L + L+V + +I+G C+ FDEAL
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 301 LMSKMEDNGCTPDAVTYEIII 321
+ M G PD T+ ++
Sbjct: 518 VFRLMGIYGIKPDVATFTTVM 538
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 146/262 (55%)
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
+++ A +L++++ G P+VVT+ +L++G+C E+++A D+F M + + PD+ +YS
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+I+G K M+ LF Q + + DVV +SS ID KSG ++ A + M +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
G+ PNV+TY+ L+ LC++ + A + ++ +G+ P + TY+ L+DG CK G L+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
+++D++ GY DV Y ++++GL K GL A+ KM + V + +I
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 324 LFQEGDNDKAEKLLRQMIARGL 345
+ D+A K+ R M G+
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGI 527
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 158/290 (54%), Gaps = 2/290 (0%)
Query: 57 LNQMVVKSINPD-VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
+++ I P V ++DAL +G+V +A + ++++ G + +V+ + ++ G
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
V+++ A + + + AP+V ++ +ING CK +D A +LFK M I PD++
Sbjct: 264 -VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
YS+LIDG K+G + +L ++ +G+ +V+ +SS +D K+ + A + K+M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
QGI P+V TYTIL+ GLC+ GR+ +A ++ +L +G + TY+ +I+G CK G
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
AL M G PD V Y +++ L ++G A + +M+ + +
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 126/291 (43%), Gaps = 37/291 (12%)
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
NVL + DV + LM+ C V+KA +IF T++ + S M+N L
Sbjct: 134 NVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVT-YSSLIDGLCKSGRISDAWELVNEMHSRGL--- 205
VD + F ++ I P V+ + ++D L G ++ A + + RG
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG 251
Query: 206 -------------------------------PPNVITYSSLLDALCKNHHVDNAISLIKK 234
PNV+T+ +L++ CK +D A L K
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 294
M+ +GI PD+ Y+ L+DG K G L ++F L KG LDV ++ I+ K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 295 FDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
A + +M G +P+ VTY I+I L Q+G +A + Q++ RG+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 145/234 (61%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ I+D LCKD +A NL++EM K I P+V+TY +I FC G+ +A LL M+
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K INPD+ TFS L++A KE KV EA+ + M++ P +TY+S++DG+C + V+
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A+ + ++M +PDV ++S +ING CK K VD+ + +F +MH I + VTY++LI
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
G C+ G + A +L+NEM S G+ P+ IT+ +L LC + A ++++ ++
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 140/246 (56%)
Query: 25 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGK 84
M I DVV T ++ C G A L +M K I P+V T++ ++D+ C G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 85 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
+A +L MI+ PD+VT+S+L++ + +V++AE+I+ M R + P +Y+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
MI+G CK VDDA + M ++ +PDVVT+S+LI+G CK+ R+ + E+ EMH RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ N +TY++L+ C+ +D A L+ +M G+ PD T+ +L GLC L+ A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 265 EVFQDL 270
+ +DL
Sbjct: 241 AILEDL 246
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 140/242 (57%)
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
I DV + +VD LCK+G A+N+ M + G P+V+TY+ ++D +C + A+
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+ M ++ PD+ ++S +IN K + V +A ++K+M +I P +TY+S+IDG
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
CK R+ DA +++ M S+G P+V+T+S+L++ CK VDN + + +M +GI+ +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
TYT L+ G C+ G L AQ++ +++ G D T+ M+ GLC +A A++
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 305 ME 306
++
Sbjct: 246 LQ 247
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 132/240 (55%)
Query: 101 KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN 160
K DVV ++++D C A+++F M + P+V +Y+ MI+ C DA
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 161 LFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 220
L + M + I PD+VT+S+LI+ K ++S+A E+ EM + P ITY+S++D C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 221 KNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 280
K VD+A ++ M +G PDV T++ L++G CK R+ + E+F ++ +G +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 281 TYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
TYT +I+G C+ G D A L+++M G PD +T+ ++ L + + KA +L +
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%)
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
M + + DV + +++ LCK +A NLF +MH + I P+V+TY+ +ID C SGR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 190 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTI 249
SDA +L+ M + + P+++T+S+L++A K V A + K+M I P TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 250 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
++DG CK R+ DA+ + + KG + DV T++ +ING CK D + + +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 310 CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ VTY +I+ Q GD D A+ LL +MI+ G+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 101/182 (55%)
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
M +I DVV ++++D LCK G +A L EMH +G+ PNV+TY+ ++D+ C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
+A L++ M + I PD+ T++ L++ K ++ +A+E+++++L TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
MI+G CK D+A ++ M GC+PD VT+ +I + D ++ +M RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 345 LL 346
++
Sbjct: 181 IV 182
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++ID CK V+DA + M +K SPDVVT++TLI+G+C ++ + + +M
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I + T++ L+ C+ G + A+++L MI G PD +T+ ++ G C E+
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 237
Query: 122 KAEDIFNTMTRME 134
KA I + + E
Sbjct: 238 KAFAILEDLQKSE 250
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 172/340 (50%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+TII CK + +AY ++ E+ K P + T+ T+I+GFC G + LL+++
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEV 301
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + V+ + ++DA + G + + +I KPDV TY+ L++ C +
Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKK 361
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A + ++ L P+ SY+ +I CK K D A L QM PD+VTY L
Sbjct: 362 EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGIL 421
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GL SG + DA + ++ RG+ P+ Y+ L+ LCK A L +M + I
Sbjct: 422 IHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
LPD Y Y L+DG + G +A++VF + KG +DV + MI G C+ G+ DEALA
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
M++M + PD TY II ++ D A K+ R M
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 15/350 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +I L ++DA N+ +++ + +SPD Y L+SG C G+ A L ++M+
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++I PD Y ++ L+D + G EA+ V ++ ++ G K DVV +++++ G+C ++
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A N M L PD +YS +I+G K + + A+ +F+ M P+VVTY+SLI
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH-VDNAISLIKKMKHQGI 240
+G C G A E EM R L PNV+TY++L+ +L K ++ A+ + M
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKC 657
Query: 241 LPDVYTYTILLDGLCKG--------------GRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
+P+ T+ LL G K G+ E F + G++ Y +
Sbjct: 658 VPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSAL 717
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
LC G+ A KM G +PD V++ I++ G++ + +
Sbjct: 718 VCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 169/353 (47%), Gaps = 11/353 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ LCK+ A E K + P+ ++Y LI +C + A LL QM
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD+ T+ IL+ L G + +A N+ +I G PD Y+ LM G C
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+ +F+ M + PD Y+ +I+G + D+A +F + + DVV ++++I
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G C+SG + +A +N M+ L P+ TYS+++D K + AI + + M+
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK 587
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD-GLFDEALA 300
P+V TYT L++G C G K A+E F+++ ++ +V TYT +I L K+ ++A+
Sbjct: 588 PNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVY 647
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQ----------EGDNDKAEKLLRQMIAR 343
M N C P+ VT+ ++ + +G N L + R
Sbjct: 648 YWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHR 700
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 172/325 (52%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ IID+ + D ++A PDV TY LI+ C G+ + AVG L++
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K + P+ +++ L+ A CK + A +L M + G KPD+VTY L+ G + ++
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDD 433
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++ + ++PD Y+++++GLCK A LF +M NI PD Y++LID
Sbjct: 434 AVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLID 493
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G +SG +A ++ + +G+ +V+ +++++ C++ +D A++ + +M + ++P
Sbjct: 494 GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVP 553
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D +TY+ ++DG K + A ++F+ + +V TYT +ING C G F A
Sbjct: 554 DKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF 613
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQE 327
+M+ P+ VTY +I +L +E
Sbjct: 614 KEMQLRDLVPNVVTYTTLIRSLAKE 638
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 173/349 (49%), Gaps = 35/349 (10%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
PDV+ +L+S +L +A + ++M + + D Y+ ILV +C EGKV+ + +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
+ G P++V Y++++ GYC + ++ A +F + P ++++ MING CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 152 ----------------------IKMVDDALNL-----FKQMHTENI--------TPDVVT 176
+ +++ ++ +K E+I PDV T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y+ LI+ LCK G+ A ++E +GL PN ++Y+ L+ A CK+ D A L+ +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+G PD+ TY IL+ GL G + DA + L+ +G + D Y ++++GLCK G F
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
A L S+M D PDA Y +I + GD D+A K+ + +G+
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 160/331 (48%), Gaps = 17/331 (5%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+ID + ++A ++S + K + DVV + +I GFC G L EA+ +N+M
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + PD +T+S ++D K+ + A + M K KP+VVTY+SL++G+C +
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCK-IKMVDDALNLFKQMHTENITPDVVTYSS 179
AE+ F M +L P+V +Y+ +I L K ++ A+ ++ M T P+ VT++
Sbjct: 607 KMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNC 666
Query: 180 LIDGLCKS--------------GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
L+ G K G+ S E + M S G + Y+S L LC + V
Sbjct: 667 LLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMV 726
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV-FQDLLIKGYNLDVRTYTI 284
A KM +G PD ++ +L G C G K + + F +L KG + VR Y+
Sbjct: 727 KTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR-YSQ 785
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
++ + EA ++ M + T + V
Sbjct: 786 VLEQHLPQPVICEASTILHAMVEKADTKEPV 816
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 153/315 (48%), Gaps = 35/315 (11%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ ++ LCK A L+SEML + I PD Y TLI GF G EA + +
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS 511
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK---PDVVTYSSLMDGYCLV 117
V K + DV + ++ C+ G + EA LA M + E+ PD TYS+++DGY
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEA---LACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC---KIKMVDDALNLFKQMHTENITPDV 174
++ A IF M + + P+V +Y+ +ING C KM ++ FK+M ++ P+V
Sbjct: 569 QDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET---FKEMQLRDLVPNV 625
Query: 175 VTYSSLIDGLCK-SGRISDA---WELVNEMHSRGLPPNVITYSSLLDALCK--------- 221
VTY++LI L K S + A WEL M + PN +T++ LL K
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWEL---MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAE 682
Query: 222 ----NHHVDNAIS-LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI-KGY 275
NH + S +MK G Y L LC G +K A +FQD ++ KG+
Sbjct: 683 PDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC-MFQDKMVKKGF 741
Query: 276 NLDVRTYTIMINGLC 290
+ D ++ +++G C
Sbjct: 742 SPDPVSFAAILHGFC 756
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 149/310 (48%), Gaps = 4/310 (1%)
Query: 36 TYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 95
++ L++ + I ++++ +G L VK + S ++ A + G + +A + +
Sbjct: 104 SFLKLLARYRIFNEIEDVLGNLRNENVKLTHE---ALSHVLHAYAESGSLSKAVEIYDYV 160
Query: 96 IKGGEK-PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 154
++ + PDV+ +SL+ + A +++ M + D S I++ G+C
Sbjct: 161 VELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK 220
Query: 155 VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 214
V+ L + + P++V Y+++I G CK G I +A+ + E+ +G P + T+ +
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT 280
Query: 215 LLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
+++ CK + L+ ++K +G+ V+ ++D + G D E ++
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND 340
Query: 275 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAE 334
DV TY I+IN LCK+G + A+ + + G P+ ++Y +I A + + D A
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 335 KLLRQMIARG 344
KLL QM RG
Sbjct: 401 KLLLQMAERG 410
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%)
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+PDV LL L K RL DA++V+ ++ +G ++D + I++ G+C +G +
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
L+ GC P+ V Y II + GD + A + +++ +G +
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM 272
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 185/335 (55%), Gaps = 5/335 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG--QLKEAVGLLNQ 59
+S +I + + L +A ++++ M + P++VTY +I C G + K+ ++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDE 329
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEA-KNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
M + PD TF+ L+ A+C G + EA +N+ M + DV +Y++L+D C
Sbjct: 330 MQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+++ A +I M + P+V SYS +I+G K D+ALNLF +M I D V+Y+
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+L+ K GR +A +++ EM S G+ +V+TY++LL K D + +MK +
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
+LP++ TY+ L+DG KGG K+A E+F++ G DV Y+ +I+ LCK+GL A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
++L+ +M G +P+ VTY II A + D++
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 172/358 (48%), Gaps = 31/358 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YST+ID K ++A NL+ EM I+ D V+Y TL+S + VG+ +EA+ +L +M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I DV T++ L+ K+GK E K V M + P+++TYS+L+DGY
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +IF L DV YS +I+ LCK +V A++L +M E I+P+VVTY+S+I
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 182 DGLCKSGRISDAWELVN----EMHSRGLPP-------NVITYSSLLDALCKNHHVDNA-- 228
D +S + + + N S L VI L N +
Sbjct: 592 DAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEE 651
Query: 229 --------ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 280
+ + +KM I P+V T++ +L+ + +DA + ++L + D +
Sbjct: 652 GMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRL----FDNK 707
Query: 281 TYTIMINGLC---KDGLFDEALALMSKM-EDNGCTPDAVTYEIIIYALFQEGDNDKAE 334
Y + ++GL ++ ++ +A +L K+ E +G T A Y + L+ G AE
Sbjct: 708 VYGV-VHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAF-YNALTDMLWHFGQKRGAE 763
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV------------G 48
+YS +ID+LCK+ LV A +L EM + ISP+VVTY ++I F G
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGG 610
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDAL-------CKEGKVKEAKNVLAVMIKGGE- 100
L + L+ + N + F L C+EG ++E +L V K +
Sbjct: 611 SLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEG-MQELSCILEVFRKMHQL 669
Query: 101 --KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD-- 156
KP+VVT+S++++ + N ED + + L D + Y + ++GL + +
Sbjct: 670 EIKPNVVTFSAILNA---CSRCNSFEDASMLLEELRLF-DNKVYGV-VHGLLMGQRENVW 724
Query: 157 -DALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
A +LF +++ + + Y++L D L G+ A + E SR + NV + S L
Sbjct: 725 LQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCL 784
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 176/338 (52%), Gaps = 9/338 (2%)
Query: 17 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILV 76
D+ ++ +M P Y T+++ QL A M + P V + ++L+
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 77 DALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
ALC+ +G V + M K G PD TY +L+ G C +++A+ +F M +
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
AP V +Y+ +INGLC K VD+A+ ++M ++ I P+V TYSSL+DGLCK GR A E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
L M +RG PN++TY++L+ LCK + A+ L+ +M QG+ PD Y ++ G C
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 256 KGGRLKDAQEVFQDLLIKG-------YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 308
+ ++A ++++ G +N+ V+T ++ GLC + A L M
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSR 402
Query: 309 GCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G + + T E ++ L ++G+ KA +L+ +++ G +
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 144/257 (56%), Gaps = 8/257 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T+I LC+ +++A L++EM+ K +P VVTYT+LI+G C + EA+ L +M
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I P+V+T+S L+D LCK+G+ +A + +M+ G +P++VTY++L+ G C ++
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY---- 177
+A ++ + M L PD Y +I+G C I +A N +M ITP+ +T+
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV 374
Query: 178 ---SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
+ ++ GLC + S A+ L M SRG+ V T SL+ LCK A+ L+ +
Sbjct: 375 KTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDE 433
Query: 235 MKHQGILPDVYTYTILL 251
+ G +P T+ +L+
Sbjct: 434 IVTDGCIPSKGTWKLLI 450
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 151/292 (51%), Gaps = 9/292 (3%)
Query: 3 STIIDSLCK-DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ +I +LC+ D V+ ++ EM + PD TY TLISG C G++ EA L +MV
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P V T++ L++ LC V EA L M G +P+V TYSSLMDG C
Sbjct: 220 EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSL 279
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++F M P++ +Y+ +I GLCK + + +A+ L +M+ + + PD Y +I
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITY-------SSLLDALCKNHHVDNAISLIKK 234
G C + +A ++EM G+ PN +T+ + ++ LC N+ A +L
Sbjct: 340 SGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLS 398
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
M+ +GI +V T L+ LCK G + A ++ +++ G T+ ++I
Sbjct: 399 MRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 182/344 (52%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I LC+D + +A+ +Y ++L + + P +VTY++LI GFC G L+ L M+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PDV + +LVD L K+G + A M+ + +VV ++SL+DG+C +N +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F M + PDV +++ ++ +++AL LF +M + PD + Y +LI
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D CK + + +L + M + ++ + ++ L K H +++A + +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ TY ++ G C RL +A+ +F+ L + + + T TI+I+ LCK+ D A+ +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
S M + G P+AVTY ++ + D + + KL +M +G+
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 182/345 (52%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y ++D L K L+ A +ML + I +VV + +LI G+C + + EA+ + M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I PDV TF+ ++ EG+++EA + M K G +PD + Y +L+D +C +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+F+ M R +++ D+ +++I+ L K ++DA F + + PD+VTY+++
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G C R+ +A + + PN +T + L+ LCKN+ +D AI + M +G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ TY L+D K ++ + ++F+++ KG + + +Y+I+I+GLCK G DEA
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ + D PD V Y I+I + G +A L M+ G+
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 164/307 (53%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A L S +L +P+VVT+ TLI+GFC G++ A L M + I PD+ +S L+D
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
K G + + + + G K DVV +SS +D Y ++ A ++ M ++P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
+V +Y+I+I GLC+ + +A ++ Q+ + P +VTYSSLIDG CK G + + L
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
+M G PP+V+ Y L+D L K + +A+ KM Q I +V + L+DG C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTY 317
R +A +VF+ + I G DV T+T ++ +G +EAL L +M G PDA+ Y
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 318 EIIIYAL 324
+I A
Sbjct: 570 CTLIDAF 576
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 184/345 (53%), Gaps = 3/345 (0%)
Query: 2 YSTIIDSL-CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ ++D+L CK + V A + + ++ + +V+ ++ G V Q++ A LL+ +
Sbjct: 220 HGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLSLV 277
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P+V TF L++ CK G++ A ++ VM + G +PD++ YS+L+DGY +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+F+ + DV +S I+ K + A ++K+M + I+P+VVTY+ L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GLC+ GRI +A+ + ++ RG+ P+++TYSSL+D CK ++ + +L + M G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PDV Y +L+DGL K G + A +L + L+V + +I+G C+ FDEAL
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ M G PD T+ ++ EG ++A L +M GL
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 114/206 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +I L K + DA ++ ++ ++ PD+VTY T+I G+C + +L EA + + V
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
P+ T +IL+ LCK + A + ++M + G KP+ VTY LMD + ++
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+ +F M ++P + SYSI+I+GLCK VD+A N+F Q + PDVV Y+ LI
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPN 208
G CK GR+ +A L M G+ P+
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 126/291 (43%), Gaps = 37/291 (12%)
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
NVL + DV + LM+ C V+KA +IF T++ + S M+N L
Sbjct: 134 NVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVT-YSSLIDGLCKSGRISDAWELVNEMHSRGL--- 205
VD + F ++ I P V+ + ++D L G ++ A + + RG
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG 251
Query: 206 -------------------------------PPNVITYSSLLDALCKNHHVDNAISLIKK 234
PNV+T+ +L++ CK +D A L K
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 294
M+ +GI PD+ Y+ L+DG K G L ++F L KG LDV ++ I+ K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 295 FDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
A + +M G +P+ VTY I+I L Q+G +A + Q++ RG+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y ++D K + ++ L+ EM K ISP +V+Y+ +I G C G++ EA + +Q +
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 103
+ PDV ++IL+ CK G++ EA + M++ G KPD
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 186/381 (48%), Gaps = 38/381 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +D LC++ V A + M+ + PDVV+YT LI+G G++ +AV + N M+
Sbjct: 117 FNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176
Query: 62 VKSINPD------------------------------------VYTFSILVDALCKEGKV 85
++PD ++ L+ CK G++
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRI 236
Query: 86 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 145
++A+ + + M K G +PD+VTY+ L++ Y N + +AE + M R + D SY+ +
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296
Query: 146 INGLCKIKMVDDALNLF-KQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+ C++ D N K+M DVV+YS+LI+ C++ A+ L EM +G
Sbjct: 297 LKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ NV+TY+SL+ A + + A L+ +M G+ PD YT +LD LCK G + A
Sbjct: 356 MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAY 415
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
VF D++ D +Y +I+GLC+ G EA+ L M+ C PD +T++ II L
Sbjct: 416 GVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Query: 325 FQEGDNDKAEKLLRQMIARGL 345
+ A K+ QM+ +G
Sbjct: 476 IRGKKLSAAYKVWDQMMDKGF 496
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 175/326 (53%), Gaps = 9/326 (2%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEML-AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ ++ LC + V+ AY + +E + + R+ V Y LISGFC G++++A L + M
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD+ T+++L++ +K A+ V+A M++ G + D +Y+ L+ +C V+ +
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 122 KAEDIFNTMTRMELAP----DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
K +N M + E+ P DV SYS +I C+ A LF++M + + +VVTY
Sbjct: 308 KC---YNFMVK-EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+SLI + G S A +L+++M GL P+ I Y+++LD LCK+ +VD A + M
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
I PD +Y L+ GLC+ GR+ +A ++F+D+ K D T+ +I GL +
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSA 483
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYA 323
A + +M D G T D + +I A
Sbjct: 484 AYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 178/346 (51%), Gaps = 3/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ I L ++ A +Y +M S TY+ ISG C V + LL+ M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD++ F++ +D LC+E KV A M++ G +PDVV+Y+ L++G +V
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF-KQMHTENITPDVVTYSSL 180
A +I+N M R ++PD ++ + ++ GLC + VD A + +++ + + V Y++L
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G CK+GRI A L + M G P+++TY+ LL+ N+ + A ++ +M GI
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Query: 241 LPDVYTYTILLDGLCKGGRL-KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
D Y+Y LL C+ K + +++ +G+ DV +Y+ +I C+ +A
Sbjct: 287 QLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAY 345
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L +M G + VTY +I A +EG++ A+KLL QM GL
Sbjct: 346 RLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGL 391
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 151/313 (48%), Gaps = 2/313 (0%)
Query: 35 VTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 94
+ Y + I+ G + AV + ++M S + ++ + L +E + + A+ +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 95 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 154
M G TYS + G C V + + + + + M + PD+ ++++ ++ LC+
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 155 VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 214
V A+ F M PDVV+Y+ LI+GL ++G+++DA E+ N M G+ P+ ++
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 215 LLDALCKNHHVDNAISLI-KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
L+ LC VD A ++ +++K + Y L+ G CK GR++ A+ + +
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 274 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
G D+ TY +++N + + A +M++M +G DA +Y ++ + DK
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 334 EKLL-RQMIARGL 345
+ ++M RG
Sbjct: 310 YNFMVKEMEPRGF 322
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 195/351 (55%), Gaps = 15/351 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ID LCK + +A ++ ++ IS D V+ +++I GFC VG+ +EA+ L++
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR 368
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ P+++ +S + +C G + A + + + G PD V Y++++DGYC + +
Sbjct: 369 LR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA F + + P + + +I+I + + DA ++F+ M TE + DVVTY++L+
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G K+ +++ +EL++EM S G+ P+V TY+ L+ ++ ++D A +I ++ +G +
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVF------QDLLIKGYNLDVRTYTIMINGLCKDGLF 295
P +T ++ G K G D QE F DL +K DV T + +++G CK
Sbjct: 546 PSTLAFTDVIGGFSKRG---DFQEAFILWFYMADLRMKP---DVVTCSALLHGYCKAQRM 599
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++A+ L +K+ D G PD V Y +I+ GD +KA +L+ M+ RG+L
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 170/346 (49%), Gaps = 3/346 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++S +ID +++ VN A L ++ I P +L+ V L+ A + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + + + S+ + C +G + +L M G +PD+V ++ +D C +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A + + ++ D S S +I+G CK+ ++A+ L +H+ + P++ YSS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSF 379
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ +C +G + A + E+ GL P+ + Y++++D C D A + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P + T TIL+ + G + DA+ VF+++ +G LDV TY +++G K ++
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
L+ +M G +PD TY I+I+++ G D+A +++ ++I RG +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 152/289 (52%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS+ + ++C + A ++ E+ + PD V YTT+I G+C +G+ +A +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P + T +IL+ A + G + +A++V M G K DVVTY++LM GY +++
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
NK ++ + M ++PDV +Y+I+I+ + +D+A + ++ P + ++ +
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G K G +A+ L M + P+V+T S+LL CK ++ AI L K+ G+
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
PDV Y L+ G C G ++ A E+ ++ +G + T+ ++ GL
Sbjct: 615 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 195/351 (55%), Gaps = 15/351 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ID LCK + +A ++ ++ IS D V+ +++I GFC VG+ +EA+ L++
Sbjct: 309 FTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR 368
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ P+++ +S + +C G + A + + + G PD V Y++++DGYC + +
Sbjct: 369 LR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA F + + P + + +I+I + + DA ++F+ M TE + DVVTY++L+
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G K+ +++ +EL++EM S G+ P+V TY+ L+ ++ ++D A +I ++ +G +
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVF------QDLLIKGYNLDVRTYTIMINGLCKDGLF 295
P +T ++ G K G D QE F DL +K DV T + +++G CK
Sbjct: 546 PSTLAFTDVIGGFSKRG---DFQEAFILWFYMADLRMKP---DVVTCSALLHGYCKAQRM 599
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++A+ L +K+ D G PD V Y +I+ GD +KA +L+ M+ RG+L
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 170/346 (49%), Gaps = 3/346 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++S +ID +++ VN A L ++ I P +L+ V L+ A + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + + + S+ + C +G + +L M G +PD+V ++ +D C +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A + + ++ D S S +I+G CK+ ++A+ L +H+ + P++ YSS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSF 379
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ +C +G + A + E+ GL P+ + Y++++D C D A + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P + T TIL+ + G + DA+ VF+++ +G LDV TY +++G K ++
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
L+ +M G +PD TY I+I+++ G D+A +++ ++I RG +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 152/289 (52%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS+ + ++C + A ++ E+ + PD V YTT+I G+C +G+ +A +
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P + T +IL+ A + G + +A++V M G K DVVTY++LM GY +++
Sbjct: 435 LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQL 494
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
NK ++ + M ++PDV +Y+I+I+ + +D+A + ++ P + ++ +
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G K G +A+ L M + P+V+T S+LL CK ++ AI L K+ G+
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
PDV Y L+ G C G ++ A E+ ++ +G + T+ ++ GL
Sbjct: 615 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 188/380 (49%), Gaps = 41/380 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ D+L K V +A+ L EM + I PDV+ YTTLI G+C+ G++ +A+ L+++M+
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++PD+ T+++LV L + G +E + M G KP+ VT S +++G C +V
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 122 KAEDIFNTM----------------------------TRMELAPDVQSYSIMINGLCKIK 153
+AED F+++ R+E Y + LC
Sbjct: 511 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEG 570
Query: 154 MVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 213
++ A ++ K+M + P +I CK + +A L + M RGL P++ TY+
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCK-----------GGRL-- 260
++ C+ + + A SL + MK +GI PDV TYT+LLD K G +
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+ A EV ++ G LDV YT++I+ CK ++A L +M D+G PD V Y +
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 321 IYALFQEGDNDKAEKLLRQM 340
I + F++G D A L+ ++
Sbjct: 751 ISSYFRKGYIDMAVTLVTEL 770
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 188/445 (42%), Gaps = 107/445 (24%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL---- 57
Y+ ++ +LC+ + +A L E + V Y T I+G C+ G+ ++AV L+
Sbjct: 219 YAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILELI 272
Query: 58 ----------------------NQMVVKSINP------------DVYTFSILVDALCKEG 83
N+M +K+ DVY ++D CK
Sbjct: 273 DRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNM 332
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
+ EA L M+ G K + V S ++ YC ++ +A + F M + D Y+
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN 392
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+ + L K+ V++A L ++M I PDV+ Y++LIDG C G++ DA +L++EM
Sbjct: 393 VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN 452
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
G+ P++ITY+ L+ L +N H + + + ++MK +G P+ T +++++GLC ++K+A
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 264 QEVFQDL----------LIKGY---NLDVRTYTIMIN---------------GLCKDGLF 295
++ F L +KGY L + Y + LC +G
Sbjct: 513 EDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYL 572
Query: 296 D-----------------------------------EALALMSKMEDNGCTPDAVTYEII 320
+ EA L M + G PD TY I+
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 321 IYALFQEGDNDKAEKLLRQMIARGL 345
I+ + + KAE L M RG+
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGI 657
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 9/300 (3%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 107
G++ + L Q+ + + YT++I+V ALC++G ++EA +L E V Y
Sbjct: 195 GKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLI------ENESVFGY 248
Query: 108 SSLMDGYCLVNEVNKAED-IFNTMTRMELAPD--VQSYSIMINGLCKIKMVDDALNLFKQ 164
+ ++G C+ E KA I + R LA D +++ G C + A ++ +
Sbjct: 249 KTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIE 308
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
M DV ++ID CK+ + +A +++M +GL N + S +L CK
Sbjct: 309 MEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDM 368
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
A+ K+ + I D Y + D L K GR+++A E+ Q++ +G DV YT
Sbjct: 369 CLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTT 428
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+I+G C G +AL L+ +M NG +PD +TY +++ L + G ++ ++ +M A G
Sbjct: 429 LIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG 488
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 22/256 (8%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEM---LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
++ + C+ L AY + + L K + Y L CI G L++A +L +
Sbjct: 528 ASFVKGYCEAGLSKKAYKAFVRLEYPLRKSV------YIKLFFSLCIEGYLEKAHDVLKK 581
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M + P ++ A CK V+EA+ + M++ G PD+ TY+ ++ YC +NE
Sbjct: 582 MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNE 641
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD-------------DALNLFKQMH 166
+ KAE +F M + + PDV +Y+++++ K+ A + ++
Sbjct: 642 LQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFS 701
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
I DVV Y+ LID CK + A EL + M GL P+++ Y++L+ + + ++D
Sbjct: 702 AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYID 761
Query: 227 NAISLIKKMKHQGILP 242
A++L+ ++ + +P
Sbjct: 762 MAVTLVTELSKKYNIP 777
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y + SLC + + A+++ +M A R+ P +I FC + ++EA L + M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY------ 114
V + + PD++T++I++ C+ ++++A+++ M + G KPDVVTY+ L+D Y
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 115 ----CLVN-EV--NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
C V EV KA ++ + + DV Y+++I+ CK+ ++ A LF +M
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+ PD+V Y++LI + G I A LV E+ +
Sbjct: 738 SGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 127/294 (43%), Gaps = 31/294 (10%)
Query: 53 AVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV------- 105
A+ L Q+ ++P+V ++ LV L G + +VL +IK E+ V
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVI 132
Query: 106 ---------------TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 150
+L+ Y + ++A D+ R++ D+++ + ++N +
Sbjct: 133 GEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMT 192
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
+ + + LFKQ+ + + TY+ ++ LC+ G + +A L+ E S V
Sbjct: 193 EFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES------VF 246
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL---LDGLCKGGRLKDAQEVF 267
Y + ++ LC + A++LI ++ + L +L + G C ++K A+ V
Sbjct: 247 GYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVI 306
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
++ G+ LDV +I+ CK+ EAL + KM G + V +I+
Sbjct: 307 IEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLIL 360
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 157/283 (55%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ ++DS K+ V A ++ EM K + D V Y +I G C G + A G + MV
Sbjct: 269 TILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ +NPDV+T++ L+ ALCKEGK EA ++ M GG PD ++Y ++ G C+ +VN+
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNR 388
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A + +M + L P+V ++++I+G + AL++ M + + P+V T ++LI
Sbjct: 389 ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIH 448
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G K GR+ DAW + NEM S + P+ TY+ LL A C H+ A L +M +G P
Sbjct: 449 GYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQP 508
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
D+ TYT L+ GLC GRLK A+ + + G +D + I+
Sbjct: 509 DIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 181/384 (47%), Gaps = 41/384 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +++ LCK + A L EM SP+ V+Y TLI G C V + +A+ L N M
Sbjct: 159 HNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMN 218
Query: 62 VKSINPDVYTFSILVDALCKEGKV-KEAKNVLAVMIKGGEKP---DVVTYSSLMDGYCLV 117
I P+ T +I+V ALC++G + K +L ++ + D+V + LMD C
Sbjct: 219 KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS-CFK 277
Query: 118 N-EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
N V +A +++ M++ + D Y+++I GLC + A M + PDV T
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD---------- 226
Y++LI LCK G+ +A +L M + G+ P+ I+Y ++ LC + V+
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSML 397
Query: 227 -------------------------NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
+A+S++ M G+ P+VYT L+ G KGGRL
Sbjct: 398 KSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLI 457
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
DA V ++ + D TY +++ C G A L +M GC PD +TY ++
Sbjct: 458 DAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
Query: 322 YALFQEGDNDKAEKLLRQMIARGL 345
L +G KAE LL ++ A G+
Sbjct: 518 RGLCWKGRLKKAESLLSRIQATGI 541
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 145/268 (54%), Gaps = 5/268 (1%)
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
SI+ D LC +GK+ A + MI G P ++T++ L++G C + KA+ + M
Sbjct: 126 SIMRD-LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
M +P+ SY+ +I GLC + VD AL LF M+ I P+ VT + ++ LC+ G I +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 193 A----WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
E + + P +++ + L+D+ KN +V A+ + K+M + + D Y
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 308
+++ GLC G + A D++ +G N DV TY +I+ LCK+G FDEA L M++
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 309 GCTPDAVTYEIIIYALFQEGDNDKAEKL 336
G PD ++Y++II L GD ++A +
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 172/320 (53%), Gaps = 4/320 (1%)
Query: 5 IIDSLCKDKLV-NDAYNLYSEML--AKRISP-DVVTYTTLISGFCIVGQLKEAVGLLNQM 60
I+ +LC+ ++ N+ L E+L ++ +P D+V T L+ G + +A+ + +M
Sbjct: 232 IVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM 291
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K++ D +++++ LC G + A + M+K G PDV TY++L+ C +
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A D+ TM +APD SY ++I GLC V+ A M ++ P+V+ ++ +
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
IDG + G S A ++N M S G+ PNV T ++L+ K + +A + +M+ I
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI 471
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD TY +LL C G L+ A +++ ++L +G D+ TYT ++ GLC G +A +
Sbjct: 472 HPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAES 531
Query: 301 LMSKMEDNGCTPDAVTYEII 320
L+S+++ G T D V + I+
Sbjct: 532 LLSRIQATGITIDHVPFLIL 551
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 168/331 (50%), Gaps = 39/331 (11%)
Query: 37 YTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 96
+++++ C+ G+L A+ L +M+ + P + T + L++ LCK G +++A ++ M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 97 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 156
+ G P+ V+Y++L+ G C VN V+KA +FNTM + + P+ + +I+++ LC+ ++
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 157 D---------------------------------------ALNLFKQMHTENITPDVVTY 177
+ AL ++K+M +N+ D V Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ +I GLC SG + A+ + +M RG+ P+V TY++L+ ALCK D A L M++
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
G+ PD +Y +++ GLC G + A E +L +V + ++I+G + G
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
AL++++ M G P+ T +I+ + G
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 137/271 (50%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ II LC + AY +M+ + ++PDV TY TLIS C G+ EA L M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD ++ +++ LC G V A L M+K P+V+ ++ ++DGY +
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A + N M + P+V + + +I+G K + DA + +M + I PD TY+ L
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLL 481
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ C G + A++L +EM RG P++ITY+ L+ LC + A SL+ +++ GI
Sbjct: 482 LGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
D + IL + R +A V++ L
Sbjct: 542 TIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 142 YSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMH 201
+S ++ LC +D AL L K+M + P ++T++ L++GLCK+G I A LV EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 202 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP------------------- 242
G PN ++Y++L+ LC ++VD A+ L M GI P
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 243 --------------------DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
D+ TIL+D K G + A EV++++ K D Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
++I GLC G A M M G PD TY +I AL +EG D+A
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 188/328 (57%), Gaps = 2/328 (0%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK-SINPDVYTFS 73
++ A ++ +M+ +S +V T+ L++G+C+ G+L++A+G+L +MV + +NPD T++
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 74 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 133
++ A+ K+G++ + K +L M K G P+ VTY++L+ GYC + + +A I M +
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 134 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDA 193
+ PD+ +Y+I+INGLC + + L L M + + PDVVTY++LIDG + G +A
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 194 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPDVYTYTILLD 252
+L+ +M + G+ N +T++ L LCK + +K++ G PD+ TY L+
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
K G L A E+ +++ KG ++ T +++ LCK+ DEA L++ G
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 313 DAVTYEIIIYALFQEGDNDKAEKLLRQM 340
D VTY +I F+E +KA ++ +M
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEM 512
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 181/379 (47%), Gaps = 39/379 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ LC + + L M + ++ PDVVTY TLI G +G EA L+ QM
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEA--KNVLAVMIKGGEKPDVVTYSSLMDGY----- 114
+ + T +I + LCKE K +EA + V ++ G PD+VTY +L+ Y
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEK-REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 115 ------------------------------CLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
C ++++A ++ N+ + D +Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+I G + + V+ AL ++ +M ITP V T++SLI GLC G+ A E +E+ G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
L P+ T++S++ CK V+ A + PD YT ILL+GLCK G + A
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
F + LI+ +D TY MI+ CKD EA L+S+ME+ G PD TY I L
Sbjct: 612 NFF-NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 325 FQEGDNDKAEKLLRQMIAR 343
++G + ++LL++ +
Sbjct: 671 MEDGKLSETDELLKKFSGK 689
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 183/377 (48%), Gaps = 38/377 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+TI+ ++ K ++D L +M + P+ VTY L+ G+C +G LKEA ++ M
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL----- 116
++ PD+ T++IL++ LC G ++E ++ M +PDVVTY++L+DG C
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLS 361
Query: 117 ----------------VNEVNK--------AEDIFNTMTR--------MELAPDVQSYSI 144
N+V E+ +TR +PD+ +Y
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+I K+ + AL + ++M + I + +T ++++D LCK ++ +A L+N H RG
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ +TY +L+ + V+ A+ + +MK I P V T+ L+ GLC G+ + A
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
E F +L G D T+ +I G CK+G ++A ++ + PD T I++ L
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 325 FQEGDNDKAEKLLRQMI 341
+EG +KA +I
Sbjct: 602 CKEGMTEKALNFFNTLI 618
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 187/381 (49%), Gaps = 37/381 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ +++ C + + DA + M+++ +++PD VTY T++ G+L + LL M
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P+ T++ LV CK G +KEA ++ +M + PD+ TY+ L++G C +
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH---------TENI- 170
+ ++ + M ++L PDV +Y+ +I+G ++ + +A L +QM T NI
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 171 --------------------------TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+PD+VTY +LI K G +S A E++ EM +G
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ N IT +++LDALCK +D A +L+ +G + D TY L+ G + +++ A
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
E++ ++ V T+ +I GLC G + A+ ++ ++G PD T+ II
Sbjct: 507 EMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 325 FQEGDNDKAEKLLRQMIARGL 345
+EG +KA + + I
Sbjct: 567 CKEGRVEKAFEFYNESIKHSF 587
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 165/291 (56%), Gaps = 4/291 (1%)
Query: 55 GLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG- 113
LL+ + S P F I + A EGK A + MI+ KP+++T ++L+ G
Sbjct: 117 SLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGL 176
Query: 114 --YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NI 170
Y ++ A ++F+ M ++ ++ +VQ++++++NG C ++DAL + ++M +E +
Sbjct: 177 VRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKV 236
Query: 171 TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 230
PD VTY++++ + K GR+SD EL+ +M GL PN +TY++L+ CK + A
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
+++ MK +LPD+ TY IL++GLC G +++ E+ + DV TY +I+G
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
+ GL EA LM +ME++G + VT+ I + L +E + + +++++
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 151/288 (52%), Gaps = 24/288 (8%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+TI+D+LCK++ +++A+NL + + D VTY TLI GF ++++A+ + ++M
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
I P V TF+ L+ LC GK + A + + G PD T++S++ GYC V K
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A + +N + PD + +I++NGLCK M + ALN F + E D VTY+++I
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMIS 633
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK-------M 235
CK ++ +A++L++EM +GL P+ TY+S + L ++ + L+KK M
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSM 693
Query: 236 KH----------------QGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
K + + + Y+ ++D LC GRLK+ +
Sbjct: 694 KRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSY 741
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 32/226 (14%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++++I LC A + E+ + PD T+ ++I G+C G++++A N+ +
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
S PD YT +IL++ LCKEG ++A N +I+ E D VTY++++ +C ++
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE-VDTVTYNTMISAFCKDKKLK 642
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLC---KIKMVDDALNLFK----------QMHT- 167
+A D+ + M L PD +Y+ I+ L K+ D+ L F Q+ T
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETE 702
Query: 168 ---------ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
E + + + YS +ID LC GR+ + HSR
Sbjct: 703 KNPATSESKEELNTEAIAYSDVIDELCSRGRLKE--------HSRS 740
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 176/332 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I + A + + L P ++TYT L+ C A+ +L M
Sbjct: 212 YNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMA 271
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V+ PD+ T++ LV+ C+ G ++E +V+ ++ G + + VTY++L+ C +
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWD 331
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ E+I N M + P V +Y+I+INGLCK +++ A++ F QM + PD+VTY++++
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ K G + DA EL+ + + PP +ITY+S++D L K + A+ L +M GI
Sbjct: 392 GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD T L+ G C+ +++A +V ++ +G + TY ++I GLCK + A+ +
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV 511
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+ M GC PD Y I+ + + G +A
Sbjct: 512 VEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 182/344 (52%), Gaps = 4/344 (1%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
I+ +LC + + DA L M P + + L+ G + QL +A+ +L MV+
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
PD T+++++ LCK+G ++ A +L M G PDV+TY++++ C+ + N +
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIR--CMFDYGNAEQ 227
Query: 125 DIFNTMTRME--LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
I +++ P + +Y++++ +C+ A+ + + M E PD+VTY+SL++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
C+ G + + ++ + S GL N +TY++LL +LC + + D ++ M P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
V TY IL++GLCK L A + F +L + D+ TY ++ + K+G+ D+A+ L+
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+++ C P +TY +I L ++G KA +L QM+ G+
Sbjct: 408 GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 175/343 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ II +LCK + A L +M PDV+TY T+I G ++A+ +
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQL 236
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P + T+++LV+ +C+ A VL M G PD+VTY+SL++ C +
Sbjct: 237 QNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE 296
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + + L + +Y+ +++ LC + D+ + M+ + P V+TY+ LI
Sbjct: 297 EVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILI 356
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GLCK+ +S A + +M + P+++TY+++L A+ K VD+AI L+ +K+
Sbjct: 357 NGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCP 416
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P + TY ++DGL K G +K A E++ +L G D T +I G C+ L +EA +
Sbjct: 417 PGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQV 476
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+ + + G TY ++I L ++ + + A +++ M+ G
Sbjct: 477 LKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 168/342 (49%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S ++ L + ++ A + M+ PD +TY +I C G ++ A+ LL M +
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
PDV T++ ++ + G ++A ++ G P ++TY+ L++ C +
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A ++ M PD+ +Y+ ++N C+ +++ ++ + + + + + VTY++L+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
LC + E++N M+ P VITY+ L++ LCK + AI +M Q LP
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D+ TY +L + K G + DA E+ L + TY +I+GL K GL +AL L
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+M D G PD +T +IY + ++A ++L++ RG
Sbjct: 443 HQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 150/305 (49%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D T ++ C G+L +A L+ M + P + S LV L + ++ +A +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
VM+ G PD +TY+ ++ C + A + M+ PDV +Y+ +I +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
+ A+ +K P ++TY+ L++ +C+ + A E++ +M G P+++TY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
+SL++ C+ +++ S+I+ + G+ + TY LL LC + +E+ +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
Y V TY I+INGLCK L A+ +M + C PD VTY ++ A+ +EG D
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 333 AEKLL 337
A +LL
Sbjct: 403 AIELL 407
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ ++ K+ +V+DA L + P ++TY ++I G G +K+A+ L +QM+
Sbjct: 387 YNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQML 446
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I PD T L+ C+ V+EA VL G TY ++ G C E+
Sbjct: 447 DAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIE 506
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 159
A ++ M PD Y+ ++ G+ ++ M +A+
Sbjct: 507 MAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 199/382 (52%), Gaps = 40/382 (10%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+TI+ LCK ++A L S+M ++ I P+VV+Y ++ G C + A + + ++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 63 KSINPDVYTFSILVDA-----------------------------------LCKEGKVKE 87
K + P+ YT+SIL+D LCK G+ +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 88 AKNVLAVMIKGGEKP---DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
A+ +LA MI+ EK ++Y+S++DG+ E++ A + M ++P+V +Y+
Sbjct: 567 ARELLANMIE--EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
++NGLCK +D AL + +M + + D+ Y +LIDG CK + A L +E+ G
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
L P+ Y+SL+ ++ A+ L KKM G+ D+ TYT L+DGL K G L A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
E++ ++ G D YT+++NGL K G F + + + +M+ N TP+ + Y +I
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 325 FQEGDNDKAEKLLRQMIARGLL 346
++EG+ D+A +L +M+ +G+L
Sbjct: 805 YREGNLDEAFRLHDEMLDKGIL 826
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 172/321 (53%), Gaps = 1/321 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +ID ++ +A + + M + I + V Y T+I+G C VGQ +A LL M+
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Query: 62 V-KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + +++ ++D KEG++ A M G P+V+TY+SLM+G C N +
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A ++ + M + D+ +Y +I+G CK ++ A LF ++ E + P Y+SL
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G G + A +L +M GL ++ TY++L+D L K+ ++ A L +M+ G+
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+PD YT++++GL K G+ ++F+++ +V Y +I G ++G DEA
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815
Query: 301 LMSKMEDNGCTPDAVTYEIII 321
L +M D G PD T++I++
Sbjct: 816 LHDEMLDKGILPDGATFDILV 836
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 179/347 (51%), Gaps = 3/347 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS-PDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+YS + + CK + A +L EM K++ P TYT++I G + +A+ L ++
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M+ I+ +V + L+ CK + A + M K G P+ VT+S L++ + E
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ KA + + M + L P V +I G K + ++AL LF + + +V ++
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNT 448
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
++ LCK G+ +A EL+++M SRG+ PNV++Y++++ C+ ++D A + + +G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ P+ YTY+IL+DG + ++A EV + ++ Y +INGLCK G +A
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 300 ALMSKM-EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L++ M E+ ++Y II F+EG+ D A +M G+
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 157/289 (54%), Gaps = 1/289 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLA-KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+Y TII+ LCK + A L + M+ KR+ ++Y ++I GF G++ AV +
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M I+P+V T++ L++ LCK ++ +A + M G K D+ Y +L+DG+C +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ A +F+ + L P Y+ +I+G + + AL+L+K+M + + D+ TY++
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LIDGL K G + A EL EM + GL P+ I Y+ +++ L K + + ++MK
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
+ P+V Y ++ G + G L +A + ++L KG D T+ I+++G
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 176/345 (51%), Gaps = 2/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++++ KD+ + A ++ ++ML + P +S L EA L ++MV
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ D T +L+ A +E K EA VL+ I+ G +PD + YS + C ++
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 122 KAEDIFNTMTRMEL-APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A + M +L P ++Y+ +I K +DDA+ L +M ++ I+ +VV +SL
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G CK+ + A L ++M G PN +T+S L++ KN ++ A+ KKM+ G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P V+ ++ G KG + ++A ++F + G +V +++ LCK G DEA
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATE 464
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L+SKME G P+ V+Y ++ ++ + D A + ++ +GL
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 123/230 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++++ LCK+ ++ A + EM K + D+ Y LI GFC ++ A L ++++
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ +NP ++ L+ G + A ++ M+K G + D+ TY++L+DG +
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +++ M + L PD Y++++NGL K + +F++M N+TP+V+ Y+++I
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
G + G + +A+ L +EM +G+ P+ T+ L+ N A SL
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 36/242 (14%)
Query: 140 QSYSIMINGLCKIKMVDDALNLFKQMHTENITP--------------------------- 172
++++ ++N K + D A+++ QM ++ P
Sbjct: 164 RAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSR 223
Query: 173 --------DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
D VT L+ + + ++A E+++ RG P+ + YS + A CK
Sbjct: 224 MVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLD 283
Query: 225 VDNAISLIKKMKHQGI-LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 283
+ A SL+++MK + + +P TYT ++ K G + DA + ++L G +++V T
Sbjct: 284 LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343
Query: 284 IMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+I G CK+ AL L KME G +P++VT+ ++I + G+ +KA + ++M
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 344 GL 345
GL
Sbjct: 404 GL 405
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%)
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
+LV+ S G N ++ LL+A K+ D+A+ ++ +M ++P L L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
+ L +A+E++ ++ G + D T +++ ++ EAL ++S+ + G PD+
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ Y + + A + D A LLR+M + L
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKL 299
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 178/376 (47%), Gaps = 35/376 (9%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
+II +L +A L+ E+ I P Y L+ G+ G LK+A ++++M +
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
++PD +T+S+L+DA G+ + A+ VL M G +P+ +S L+ G+ E K
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
+ M + + PD Q Y+++I+ K +D A+ F +M +E I PD VT+++LID
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
CK GR A E+ M RG P TY+ ++++ D+ L+ KMK QGILP+
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD------- 296
V T+T L+D K GR DA E +++ G Y +IN + GL +
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 297 ----------------------------EALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
EA A++ M++NG PD VTY ++ AL +
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 329 DNDKAEKLLRQMIARG 344
K + +MI G
Sbjct: 669 KFQKVPVVYEEMIMSG 684
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 160/323 (49%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +ID+ A + EM A + P+ ++ L++GF G+ ++ +L +M
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD +++++D K + A M+ G +PD VT+++L+D +C
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
AE++F M R P +Y+IMIN + DD L +M ++ I P+VVT+++L+
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D KSGR +DA E + EM S GL P+ Y++L++A + + A++ + M G+
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P + L++ + R +A V Q + G DV TYT ++ L + F + +
Sbjct: 617 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVV 676
Query: 302 MSKMEDNGCTPDAVTYEIIIYAL 324
+M +GC PD ++ AL
Sbjct: 677 YEEMIMSGCKPDRKARSMLRSAL 699
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 168/346 (48%), Gaps = 2/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDA--YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
YS +I SL + ++ LY E+ ++ DV +I GF G +A+ LL
Sbjct: 235 YSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGM 294
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
++ T ++ AL G+ EA+ + + + G KP Y++L+ GY
Sbjct: 295 AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ AE + + M + ++PD +YS++I+ + A + K+M ++ P+ +S
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 414
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ G G ++++ EM S G+ P+ Y+ ++D K + +D+A++ +M +G
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 474
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
I PD T+ L+D CK GR A+E+F+ + +G TY IMIN +D+
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L+ KM+ G P+ VT+ ++ + G + A + L +M + GL
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 153/347 (44%), Gaps = 2/347 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA--VGLLNQ 59
Y+ +I + ++ + A NL ++M D V Y+ +I ++ + L +
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+ + DV + ++ K G +A +L + G T S++
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+AE +F + + + P ++Y+ ++ G K + DA ++ +M ++PD TYS
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LID +GR A ++ EM + + PN +S LL ++K+MK G
Sbjct: 380 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG 439
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PD Y +++D K L A F +L +G D T+ +I+ CK G A
Sbjct: 440 VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAE 499
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ ME GC P A TY I+I + + D ++LL +M ++G+L
Sbjct: 500 EMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 136/276 (49%), Gaps = 7/276 (2%)
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 131
+SIL+ AL + K+ EA ++ + +TY++L+ N++ KA ++ M
Sbjct: 170 YSILIHALGRSEKLYEA-----FLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMR 224
Query: 132 RMELAPDVQSYSIMINGLCKIKMVDDA--LNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
+ D +YS++I L + +D L L+K++ + + DV + +I G KSG
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 190 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTI 249
S A +L+ + GL T S++ AL + A +L ++++ GI P Y
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 250 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
LL G K G LKDA+ + ++ +G + D TY+++I+ G ++ A ++ +ME
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 310 CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
P++ + ++ G+ K ++L++M + G+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T++D K NDA EM + + P Y LI+ + G ++AV M
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P + + L++A ++ + EA VL M + G KPDVVTY++LM V++
Sbjct: 612 SDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQ 671
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 153
K ++ M PD ++ S++ + L +K
Sbjct: 672 KVPVVYEEMIMSGCKPDRKARSMLRSALRYMK 703
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+ +I++ + L A N + M + + P ++ +LI+ F + EA +L M
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PDV T++ L+ AL + K ++ V MI G KPD S L + +
Sbjct: 646 KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQT 705
Query: 121 NKA 123
+A
Sbjct: 706 LRA 708
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 188/367 (51%), Gaps = 33/367 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKR---ISPDVVTYTTLISGFCIVGQLKEAVGLLN 58
+++++ L K A++L+ EM +R ++PD T+ TLI+GFC + EA +
Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEM--RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFK 233
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE--KPDVVTYSSLMDGYCL 116
M + NPDV T++ ++D LC+ GKVK A NVL+ M+K P+VV+Y++L+ GYC+
Sbjct: 234 DMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCM 293
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD----------DALNLFKQMH 166
E+++A +F+ M L P+ +Y+ +I GL + D DA F
Sbjct: 294 KQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTF---- 349
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
PD T++ LI C +G + A ++ EM + L P+ +YS L+ LC + D
Sbjct: 350 ----APDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFD 405
Query: 227 NAISLIKKMKHQGIL-------PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 279
A +L ++ + +L P Y + + LC G+ K A++VF+ L+ +G D
Sbjct: 406 RAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DP 464
Query: 280 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
+Y +I G C++G F A L+ M PD TYE++I L + G+ A L++
Sbjct: 465 PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR 524
Query: 340 MIARGLL 346
M+ L
Sbjct: 525 MLRSSYL 531
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 165/321 (51%), Gaps = 12/321 (3%)
Query: 37 YTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 96
+ +LI + G +E+V L M I+P V TF+ L+ L K G+ A ++ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 97 KG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 155
+ G PD T+++L++G+C + V++A IF M PDV +Y+ +I+GLC+ V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 156 DDALNLFKQM--HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 213
A N+ M ++ P+VV+Y++L+ G C I +A + ++M SRGL PN +TY+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 214 SLLDALCKNHHVDNAISLI--KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
+L+ L + H D ++ PD T+ IL+ C G L A +VFQ++L
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED-------NGCTPDAVTYEIIIYAL 324
+ D +Y+++I LC FD A L +++ + + C P A Y + L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 325 FQEGDNDKAEKLLRQMIARGL 345
G +AEK+ RQ++ RG+
Sbjct: 441 CANGKTKQAEKVFRQLMKRGV 461
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 186/364 (51%), Gaps = 30/364 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+I+ CK+ +V++A+ ++ +M +PDVVTY T+I G C G++K A +L+ M+
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 62 VKS--INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
K+ ++P+V +++ LV C + ++ EA V M+ G KP+ VTY++L+ G +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 120 VNKAEDI-------FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 172
++ +DI F T APD +++I+I C +D A+ +F++M + P
Sbjct: 332 YDEIKDILIGGNDAFTT-----FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-------PPNVITYSSLLDALCKNHHV 225
D +YS LI LC A L NE+ + + P Y+ + + LC N
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKT 446
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
A + +++ +G+ D +Y L+ G C+ G+ K A E+ +L + + D+ TY ++
Sbjct: 447 KQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELL 505
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA--------EKLL 337
I+GL K G A + +M + P A T+ ++ L + +++ EK +
Sbjct: 506 IDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRI 565
Query: 338 RQMI 341
RQ I
Sbjct: 566 RQNI 569
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 150/284 (52%), Gaps = 13/284 (4%)
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 131
F+ L+ + G +E+ + M + G P V+T++SL+ A D+F+ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 132 RME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
R + PD +++ +ING CK MVD+A +FK M + PDVVTY+++IDGLC++G++
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 191 SDAWELVNEMHSRG--LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
A +++ M + + PNV++Y++L+ C +D A+ + M +G+ P+ TY
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKG------YNLDVRTYTIMINGLCKDGLFDEALALM 302
L+ GL + R + +D+LI G + D T+ I+I C G D A+ +
Sbjct: 321 TLIKGLSEAHRYDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+M + PD+ +Y ++I L + D+AE L ++ + +L
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 178/452 (39%), Gaps = 114/452 (25%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKR--ISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
Y+TIID LC+ V A+N+ S ML K + P+VV+YTTL+ G+C+ ++ EAV + +
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 60 MVVKSIN-------------------------------------PDVYTFSILVDALCKE 82
M+ + + PD TF+IL+ A C
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 83 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL------- 135
G + A V M+ PD +YS L+ C+ NE ++AE +FN + E+
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
P +Y+ M LC A +F+Q+ + D +Y +LI G C+ G+ A+E
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYE 485
Query: 196 LVNEMHSRGLPPNV-----------------------------------ITYSSLLDALC 220
L+ M R P++ T+ S+L L
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELA 545
Query: 221 KNHHVDNAISLIKKMKHQGILP--DVYTYTI----------------------------- 249
K + + L+ M + I D+ T +
Sbjct: 546 KRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKME 605
Query: 250 -LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 308
LL LC+ +L DA + L K +D+ T +I GLCK EA +L +++ +
Sbjct: 606 ELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVEL 665
Query: 309 GCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
G + ++ AL G ++ + + ++M
Sbjct: 666 GNHQQLSCHVVLRNALEAAGKWEELQFVSKRM 697
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 184/380 (48%), Gaps = 36/380 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I S K + A L+ EM + P YTTL+ + VG++++A+ L +M
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+P VYT++ L+ L K G+V EA M++ G PDVV ++LM+ V V
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM-VDDALNLFKQMHTENITPDVVTYSSL 180
+ ++F+ M P V SY+ +I L + K V + + F +M ++++P TYS L
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD-------------- 226
IDG CK+ R+ A L+ EM +G PP Y SL++AL K +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 227 ---------------------NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
A+ L +MK+QG PDVY Y L+ G+ K G + +A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
+ + + G D+ ++ I++NG + G+ A+ + ++ +G PD VTY ++
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 326 QEGDNDKAEKLLRQMIARGL 345
G ++A +++R+M +G
Sbjct: 596 HAGMFEEAARMMREMKDKGF 615
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 168/324 (51%), Gaps = 1/324 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I L K V++AY Y +ML ++PDVV L++ VG+++E + ++M
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 62 VKSINPDVYTFSILVDALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P V +++ ++ AL + + V E + M P TYS L+DGYC N V
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA + M P +Y +IN L K K + A LFK++ Y+ +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I K G++S+A +L NEM ++G P+V Y++L+ + K ++ A SL++KM+ G
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D+ ++ I+L+G + G + A E+F+ + G D TY ++ G+F+EA
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAAR 605
Query: 301 LMSKMEDNGCTPDAVTYEIIIYAL 324
+M +M+D G DA+TY I+ A+
Sbjct: 606 MMREMKDKGFEYDAITYSSILDAV 629
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 181/345 (52%), Gaps = 2/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+++I L ++ + +Y+EM + PD +TY+ LIS + +G+ A+ L ++M
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P ++ L+ K GKV++A ++ M + G P V TY+ L+ G V
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A + M R L PDV + ++N L K+ V++ N+F +M TP VV+Y+++
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 181 IDGLCKS-GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
I L +S +S+ ++M + + P+ TYS L+D CK + V+ A+ L+++M +G
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKG 439
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
P Y L++ L K R + A E+F++L N+ R Y +MI K G EA+
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L ++M++ G PD Y ++ + + G ++A LLR+M G
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYS 178
V+KA +F + P +Y+ +I L + + ++ +M E + PD +TYS
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+LI K GR A L +EM + P Y++LL K V+ A+ L ++MK
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G P VYTYT L+ GL K GR+ +A ++D+L G DV ++N L K G +E
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+ S+M CTP V+Y +I ALF+
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I K +++A +L++EM + PDV Y L+SG G + EA LL +M
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
D+ + +I+++ + G + A + + G KPD VTY++L+ +
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 162
+A + M D +YS +++ + + D ++ F
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 132 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE---NITPDVVTYSSLIDGLCKSG 188
R D +Y +I L + ++ + +++ +++P V+ S L+ L ++
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVL--SELVKALGRAK 176
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG-ILPDVYTY 247
+S A + + R P TY+S++ L + + + +M ++G PD TY
Sbjct: 177 MVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITY 236
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+ L+ K GR A +F ++ + YT ++ K G ++AL L +M+
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
GC+P TY +I L + G D+A + M+ GL
Sbjct: 297 AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 154/280 (55%), Gaps = 1/280 (0%)
Query: 37 YTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 96
Y L+S G ++E L +M+ ++PD+YTF+ LV+ CK G V EAK + +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 97 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 156
+ G PD TY+S + G+C EV+ A +F MT+ + SY+ +I GL + K +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 157 DALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 216
+AL+L +M +N P+V TY+ LID LC SG+ S+A L +M G+ P+ Y+ L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 217 DALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 276
+ C +D A L++ M G++P+V TY L+ G CK + A + +L +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
D+ TY +I G C G D A L+S ME++G P+ T
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 149/280 (53%), Gaps = 1/280 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++ SL + LV + LY+EML +SPD+ T+ TL++G+C +G + EA + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+PD +T++ + C+ +V A V M + G + V+Y+ L+ G +++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M P+V++Y+++I+ LC +A+NLFKQM I PD Y+ LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
C + +A L+ M GL PNVITY++L+ CK +V A+ L+ KM Q ++
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLV 361
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 281
PD+ TY L+ G C G L A + + G + RT
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 147/272 (54%), Gaps = 1/272 (0%)
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L+ +L + G V+E K + M++ PD+ T+++L++GYC + V +A+ + +
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
PD +Y+ I G C+ K VD A +FK+M + V+Y+ LI GL ++ +I +A
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
L+ +M PNV TY+ L+DALC + A++L K+M GI PD YT+L+
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
C G L +A + + +L G +V TY +I G CK + +A+ L+SKM + PD
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLVPDL 364
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+TY +I G+ D A +LL M GL+
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 107 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
Y++L+ V + + ++ M ++PD+ +++ ++NG CK+ V +A +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
PD TY+S I G C+ + A+++ EM G N ++Y+ L+ L + +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 227 NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
A+SL+ KMK P+V TYT+L+D LC G+ +A +F+ + G D YT++I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
C DEA L+ M +NG P+ +TY +I F + + KA LL +M+ + L+
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG-FCKKNVHKAMGLLSKMLEQNLV 361
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+ +I S C +++A L ML + P+V+TY LI GFC + +A+GLL++M
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKM 355
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 106
+ +++ PD+ T++ L+ C G + A +L++M + G P+ T
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 163/310 (52%), Gaps = 2/310 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ ++ +V A + EM + PD + L+ C G +KEA + M
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K P++ F+ L+ C+EGK+ EAK VL M + G +PD+V +++L+ GY ++
Sbjct: 229 REK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKI-KMVDDALNLFKQMHTENITPDVVTYSS 179
A D+ N M + P+V Y+++I LC+ K +D+A+ +F +M D+VTY++
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LI G CK G I + ++++M +G+ P+ +TY ++ A K + + LI+KMK +G
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
PD+ Y +++ CK G +K+A ++ ++ G + V T+ IMING G EA
Sbjct: 408 CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEAC 467
Query: 300 ALMSKMEDNG 309
+M G
Sbjct: 468 NHFKEMVSRG 477
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 178/342 (52%), Gaps = 7/342 (2%)
Query: 9 LCKDKLVNDAYNLYSEMLAKRISPDVVT---YTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
L K + + L EM ++ +P+++ + L+ F +K+AV +L++M +
Sbjct: 141 LSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
PD Y F L+DALCK G VKEA V M + P++ ++SL+ G+C ++ +A++
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+ M L PD+ ++ +++G + DA +L M P+V Y+ LI LC
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 186 KS-GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
++ R+ +A + EM G +++TY++L+ CK +D S++ M+ +G++P
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
TY ++ K + ++ E+ + + +G + D+ Y ++I CK G EA+ L ++
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
ME NG +P T+ I+I +G +A ++M++RG+
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 163/339 (48%), Gaps = 42/339 (12%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+++++ C++ + +A + +M + PD+V +T L+SG+ G++ +A L+N M
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 62 VKSINPDVYTFSILVDALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P+V +++L+ ALC+ E ++ EA V M + G + D+VTY++L+ G+C +
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI 358
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+K + + M + + P +Y ++ K + ++ L L ++M PD++ Y+ +
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I CK G + +A L NEM + GL P V T+ +++ + A + K+M +GI
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 241 L--PDVYTYTILLDGLCKGGRLKDAQEVF---------------------QDLLIKG--- 274
P T LL+ L + +L+ A++V+ L KG
Sbjct: 479 FSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVK 538
Query: 275 ----YNLDV---------RTYTIMINGLCKDGLFDEALA 300
Y LD+ TY ++ GL K L++ +A
Sbjct: 539 EACSYCLDMMEMDLMPQPNTYAKLMKGLNK--LYNRTIA 575
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I CK V +A L++EM A +SP V T+ +I+GF G L EA +M
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 61 VVKSI--NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
V + I P T L++ L ++ K++ AK+V + C+ N
Sbjct: 474 VSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWS---------------------CISN 512
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+ + E +V +++I I+ L V +A + M ++ P TY+
Sbjct: 513 KTSSCE------------LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYA 560
Query: 179 SLIDGLCK 186
L+ GL K
Sbjct: 561 KLMKGLNK 568
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 194/344 (56%), Gaps = 6/344 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ +LC+ V++ +L + + D V Y+ I G+ G L +A+ +MV
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K +N DV ++SIL+D L KEG V+EA +L MIK G +P+++TY++++ G C + ++
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +FN + + + D Y +I+G+C+ ++ A ++ M I P ++TY+++I
Sbjct: 330 EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 389
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GLC +GR+S+A E+ S+G+ +VITYS+LLD+ K ++D + + ++ I
Sbjct: 390 NGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP 444
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D+ ILL G +A +++ + D TY MI G CK G +EAL +
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+++ + + AV Y II AL ++G D A ++L ++ +GL
Sbjct: 505 FNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 75/415 (18%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y T+ID +C+ +N A+++ +M + I P ++TY T+I+G C+ G++ EA
Sbjct: 349 LYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DE 403
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V K + DV T+S L+D+ K + + ++ D+V + L+ + L+
Sbjct: 404 VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAY 463
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A+ ++ M M+L PD +Y+ MI G CK +++AL +F ++ +++ V Y+ +
Sbjct: 464 GEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRI 522
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA---------------------- 218
ID LCK G + A E++ E+ +GL ++ T +LL +
Sbjct: 523 IDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNS 582
Query: 219 -------------LCKNHHVDNAISLIKKMKHQGI---LP-------------------- 242
LCK + AI + M+ +G+ P
Sbjct: 583 DVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLV 642
Query: 243 -----------DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
DV YTI+++GLCK G L A + +G L+ TY +INGLC+
Sbjct: 643 VNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQ 702
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G EAL L +E+ G P VTY I+I L +EG AEKLL M+++GL+
Sbjct: 703 QGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV 757
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 182/354 (51%), Gaps = 29/354 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ IID+LCK +++ A + E+ K + D+ T TL+ G K +GL+ +
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGL- 577
Query: 62 VKSINPDVYTFSILVDA---LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL-------- 110
+ +N DV +L DA LCK G + A V +M + G VT+ S
Sbjct: 578 -EQLNSDV-CLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDN 632
Query: 111 ---MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+D Y LV VN E ++M DV Y+I+INGLCK + ALNL +
Sbjct: 633 LRSLDAYLLV--VNAGETTLSSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+T + +TY+SLI+GLC+ G + +A L + + + GL P+ +TY L+D LCK +
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A L+ M +G++P++ Y ++DG CK G+ +DA V ++ D T + MI
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
G CK G +EAL++ ++ +D + D + +I +G ++A LLR+M+
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 151/279 (54%), Gaps = 3/279 (1%)
Query: 67 PDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGGEKP-DVVTYSSLMDGYCLVNEVNKAE 124
P TF L+ ++G++ A VL +M K P D S+++ G+C + + A
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 125 DIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
F + L P++ +Y+ +++ LC++ VD+ +L +++ E D V YS+ I G
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
K G + DA EM +G+ +V++YS L+D L K +V+ A+ L+ KM +G+ P+
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
+ TYT ++ GLCK G+L++A +F +L G +D Y +I+G+C+ G + A +++
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 371
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
ME G P +TY +I L G +A+++ + ++
Sbjct: 372 DMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG 410
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 149/312 (47%), Gaps = 45/312 (14%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ II+ LCK+ + A NL S ++ ++ + +TY +LI+G C G L EA+ L + +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P T+ IL+D LCKEG +A+ +L M+ G P+++ Y+S++DGYC + +
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + + + PD + S MI G CK +++AL++F + +NI+ D + LI
Sbjct: 778 DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA--------------LCKNHHVDN 227
G C GR+ +A L+ EM + +V+ + +DA LC+ V
Sbjct: 838 KGFCTKGRMEEARGLLREML---VSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQ 894
Query: 228 AISLI----------------------------KKMKHQGILPDVYTYTILLDGLCKGGR 259
AI ++ +++K + + D ++ + LC G+
Sbjct: 895 AIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGK 954
Query: 260 LKDAQEVFQDLL 271
L+ A E +L
Sbjct: 955 LEQANEFVMSVL 966
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 119/205 (58%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
DV ++I+++ LCKEG + +A N+ + G + +TY+SL++G C + +A +F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
+++ + L P +Y I+I+ LCK + DA L M ++ + P+++ Y+S++DG CK
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
G+ DA +V+ + P+ T SS++ CK ++ A+S+ + K + I D + +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLI 272
L+ G C GR+++A+ + +++L+
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLV 858
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 171/332 (51%), Gaps = 6/332 (1%)
Query: 20 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK-SINPDVYTFSILVD- 77
YS++ +K+I+ + Y+ + F + + ++A +N + K SI P + L+
Sbjct: 47 QFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHG 106
Query: 78 -ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 136
++ ++ K + + G P +T+ SL+ + E++ A ++ MT +
Sbjct: 107 FSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVN 166
Query: 137 PDVQSY--SIMINGLCKIKMVDDALNLFKQ-MHTENITPDVVTYSSLIDGLCKSGRISDA 193
++ S +I+G CKI + AL F+ + + + P++VTY++L+ LC+ G++ +
Sbjct: 167 YPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV 226
Query: 194 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDG 253
+LV + G + + YS+ + K + +A+ ++M +G+ DV +Y+IL+DG
Sbjct: 227 RDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDG 286
Query: 254 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPD 313
L K G +++A + ++ +G ++ TYT +I GLCK G +EA L +++ G D
Sbjct: 287 LSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVD 346
Query: 314 AVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
Y +I + ++G+ ++A +L M RG+
Sbjct: 347 EFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 189/344 (54%), Gaps = 1/344 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +++SL K +L + + ++ +M+ + ++ Y L+ G ++A LL++M
Sbjct: 172 TVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEE 231
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K + PD++T++ L+ CK+ EA +V M + G P++VTY+S + G+ + +
Sbjct: 232 KGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMRE 291
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A +F + + ++ + +Y+ +I+G C++ +D+AL L + M + +P VVTY+S++
Sbjct: 292 ATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
LC+ GRI +A L+ EM + + P+ IT ++L++A CK + +A+ + KKM G+
Sbjct: 351 KLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D+Y+Y L+ G CK L++A+E ++ KG++ TY+ +++G DE L+
Sbjct: 411 DMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL 470
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ E G D Y +I + + D A+ L M +GL+
Sbjct: 471 EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 174/346 (50%), Gaps = 1/346 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ ++ + K A L SEM K + PD+ TY TLIS +C EA+ + ++M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P++ T++ + +EG+++EA + IK + VTY++L+DGYC +N++
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A + M +P V +Y+ ++ LC+ + +A L +M + I PD +T ++L
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+ CK + A ++ +M GL ++ +Y +L+ CK ++NA + M +G
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P TY+ L+DG + + ++ ++ +G DV Y +I +CK D A
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKV 503
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
L ME G D+V + + YA ++ G +A L M R L+
Sbjct: 504 LFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLM 549
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 177/378 (46%), Gaps = 38/378 (10%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVT--YTTLISGFCIVGQLKEAVGLLNQMVV 62
++D L + +L++ L S + P+ V+ ++ L+ + G + +++ + Q+
Sbjct: 102 LLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRS 161
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ P + ++L+++L K+ + M+K G ++ Y+ L+ + K
Sbjct: 162 CGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEK 221
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
AE + + M + PD+ +Y+ +I+ CK M +AL++ +M + P++VTY+S I
Sbjct: 222 AEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIH 281
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G + GR+ +A L E+ + N +TY++L+D C+ + +D A+ L + M+ +G P
Sbjct: 282 GFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSP 340
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDL--------------LIKGY------------- 275
V TY +L LC+ GR+++A + ++ LI Y
Sbjct: 341 GVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVK 400
Query: 276 --------NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
LD+ +Y +I+G CK + A + M + G +P TY ++ + +
Sbjct: 401 KKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQ 460
Query: 328 GDNDKAEKLLRQMIARGL 345
D+ KLL + RGL
Sbjct: 461 NKQDEITKLLEEFEKRGL 478
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 118/214 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y++I+ LC+D + +A L +EM K+I PD +T TLI+ +C + + AV + +M+
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ D+Y++ L+ CK +++ AK L MI+ G P TYS L+DG+ N+ +
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD 464
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + + L DV Y +I +CK++ VD A LF+ M + + D V ++++
Sbjct: 465 EITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMA 524
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
++G++++A L + M++R L N+ Y S+
Sbjct: 525 YAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 170 ITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS---LLDALCKNHHVD 226
IT V++ SL G G S +W + + LP + + S ++ L K+ H
Sbjct: 43 ITTQVISELSLFSGY---GGPSLSWSFF--IWTDSLPSSKHSLQSSWKMILILTKHKHFK 97
Query: 227 NAISLIKKMKHQGILP-----------------DV-YTYTILLDGLCKGGRLKDAQEVFQ 268
A L+ K+ + +L DV + ++ L+ K G + D+ VF+
Sbjct: 98 TAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFE 157
Query: 269 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
+ G ++ T+++N L K L D + KM G + Y ++++A + G
Sbjct: 158 QIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSG 217
Query: 329 DNDKAEKLLRQMIARGLL 346
D +KAEKLL +M +G+
Sbjct: 218 DPEKAEKLLSEMEEKGVF 235
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 167/323 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I+ K K +A+ ++ +M+ + + PDV+ Y +IS FC +G + A+ + +M
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P TF ++ K G ++ + V +M + G P V T++ L++G ++
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA +I + MT ++ + +Y+ ++ G + A F ++ E + D+ TY +L+
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
CKSGR+ A + EM +R +P N Y+ L+D + V A LI++MK +G+
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD++TYT + K G + A + +++ G +++TYT +I G + L ++AL+
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 302 MSKMEDNGCTPDAVTYEIIIYAL 324
+M+ G PD Y ++ +L
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSL 844
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 170/344 (49%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +I+ K ++ A + M + + ++ TY+ +I+GF + A + MV
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + PDV ++ ++ A C G + A + M K +P T+ ++ GY ++
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
++ ++F+ M R P V +++ +INGL + + ++ A+ + +M ++ + TY+ ++
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G G A+E + + GL ++ TY +LL A CK+ + +A+++ K+M + I
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP 726
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ + Y IL+DG + G + +A ++ Q + +G D+ TYT I+ K G + A
Sbjct: 727 RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 786
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +ME G P+ TY +I + +KA +M A G+
Sbjct: 787 IEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 169/345 (48%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y II + C+ + A L EM + I + Y T++ G+ +V K+ + + ++
Sbjct: 416 IYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL 475
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
P V T+ L++ K GK+ +A V VM + G K ++ TYS +++G+ + +
Sbjct: 476 KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDW 535
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A +F M + + PDV Y+ +I+ C + +D A+ K+M P T+ +
Sbjct: 536 ANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPI 595
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G KSG + + E+ + M G P V T++ L++ L + ++ A+ ++ +M G+
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ +TYT ++ G G A E F L +G ++D+ TY ++ CK G ALA
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M ++ Y I+I + GD +A L++QM G+
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 167/319 (52%), Gaps = 6/319 (1%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
+P VVTY LI+ + VG++ +A+ + M + + ++ T+S++++ K +K+
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK---LKDWA 536
Query: 90 NVLAV---MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
N AV M+K G KPDV+ Y++++ +C + +++A M ++ P +++ +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
+G K + +L +F M P V T++ LI+GL + ++ A E+++EM G+
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
N TY+ ++ A +++++G+ D++TY LL CK GR++ A V
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+++ + + Y I+I+G + G EA L+ +M+ G PD TY I A +
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 327 EGDNDKAEKLLRQMIARGL 345
GD ++A + + +M A G+
Sbjct: 777 AGDMNRATQTIEEMEALGV 795
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 145/298 (48%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ II + C ++ A EM R P T+ +I G+ G ++ ++ + + M
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
P V+TF+ L++ L ++ ++++A +L M G + TY+ +M GY V +
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA + F + L D+ +Y ++ CK + AL + K+M NI + Y+ L
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNIL 735
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
IDG + G + +A +L+ +M G+ P++ TY+S + A K ++ A I++M+ G+
Sbjct: 736 IDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGV 795
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
P++ TYT L+ G + + A ++++ G D Y ++ L EA
Sbjct: 796 KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 173/347 (49%), Gaps = 4/347 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ- 59
+Y+++I + + +++A + +M + I +VTY+ ++ GF G + A ++
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 60 -MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+ K++N +Y ++ A C+ ++ A+ ++ M + G + Y ++MDGY +V
Sbjct: 406 KRIHKTLNASIY--GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+ K +F + P V +Y +IN K+ + AL + + M E + ++ TYS
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYS 523
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+I+G K ++A+ + +M G+ P+VI Y++++ A C ++D AI +K+M+
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
P T+ ++ G K G ++ + EVF + G V T+ +INGL + ++A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ ++ +M G + + TY I+ GD KA + ++ GL
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%)
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
P F ++V + G + A+ M G P Y+SL+ Y + ++++A
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
M + + +YS+++ G K + A F + + T + Y +I C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
++ + A LV EM G+ + Y +++D + + K++K G P V
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
TY L++ K G++ A EV + + +G +++TY++MING K + A A+ M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
G PD + Y II A G+ D+A + +++M
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%)
Query: 192 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
D W+ V + P+ + ++ + + A ++M+ +GI P YT L+
Sbjct: 292 DNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLI 351
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
G + +A + + +G + + TY++++ G K G + A + + T
Sbjct: 352 HAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT 411
Query: 312 PDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+A Y IIYA Q + ++AE L+R+M G+
Sbjct: 412 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGI 445
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 175/321 (54%)
Query: 25 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGK 84
M + +S +VVTYT+LI G+C G ++EA + + K + D + + +L+D C+ G+
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 85 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
+++A V MI+ G + + +SL++GYC ++ +AE IF+ M L PD +Y+
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+++G C+ VD+AL L QM + + P V+TY+ L+ G + G D L M RG
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ + I+ S+LL+AL K + A+ L + + +G+L D T +++ GLCK ++ +A+
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
E+ ++ I V+TY + +G K G EA A+ ME G P Y +I
Sbjct: 527 EILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGA 586
Query: 325 FQEGDNDKAEKLLRQMIARGL 345
F+ +K L+ ++ ARGL
Sbjct: 587 FKYRHLNKVADLVIELRARGL 607
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 178/344 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I CK L+ +A +++ + K++ D Y L+ G+C GQ+++AV + + M+
Sbjct: 299 YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI 358
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + + L++ CK G++ EA+ + + M KPD TY++L+DGYC V+
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M + E+ P V +Y+I++ G +I D L+L+K M + D ++ S+L+
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ L K G ++A +L + +RGL + IT + ++ LCK V+ A ++ +
Sbjct: 479 EALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P V TY L G K G LK+A V + + KG + Y +I+G K ++ L
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ ++ G TP TY +I G DKA +MI +G+
Sbjct: 599 VIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 166/296 (56%), Gaps = 3/296 (1%)
Query: 53 AVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG--GEKPDVVTYSSL 110
A+ + +QM+ ++PDV+T SI+V+A C+ G V +A V A + G + +VVTY+SL
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSL 267
Query: 111 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 170
++GY ++ +V + M+ ++ +V +Y+ +I G CK ++++A ++F+ + + +
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 171 TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 230
D Y L+DG C++G+I DA + + M G+ N +SL++ CK+ + A
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQ 387
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
+ +M + PD +TY L+DG C+ G + +A ++ + K V TY I++ G
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ G F + L+L M G D ++ ++ ALF+ GD ++A KL ++ARGLL
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 186/345 (53%), Gaps = 1/345 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
S ++++ C+ V+ A E + + +VVTY +LI+G+ ++G ++ +L M
Sbjct: 229 SIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS 288
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ ++ +V T++ L+ CK+G ++EA++V ++ + D Y LMDGYC ++
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + + M + + + + +ING CK + +A +F +M+ ++ PD TY++L+
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG C++G + +A +L ++M + + P V+TY+ LL + + +SL K M +G+
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D + + LL+ L K G +A ++++++L +G D T +MI+GLCK +EA +
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ + C P TY+ + + ++ G+ +A + M +G+
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 177/383 (46%), Gaps = 39/383 (10%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
ST++++L K N+A L+ +LA+ + D +T +ISG C + ++ EA +L+ + +
Sbjct: 475 STLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI 534
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
P V T+ L K G +KEA V M + G P + Y++L+ G +NK
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK 594
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
D+ + L P V +Y +I G C I M+D A +M + IT +V S + +
Sbjct: 595 VADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIAN 654
Query: 183 GLCKSGRISDAWELV--------------------------------------NEMHSRG 204
L + +I +A L+ N +
Sbjct: 655 SLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKL 714
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPDVYTYTILLDGLCKGGRLKDA 263
L PN I Y+ + LCK +++A L + +PD YTYTIL+ G G + A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
+ ++ +KG ++ TY +I GLCK G D A L+ K+ G TP+A+TY +I
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 324 LFQEGDNDKAEKLLRQMIARGLL 346
L + G+ +A +L +MI +GL+
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGLV 857
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 174/346 (50%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY ++D C+ + DA ++ M+ + + +LI+G+C GQL EA + ++M
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
S+ PD +T++ LVD C+ G V EA + M + P V+TY+ L+ GY +
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ ++ M + + D S S ++ L K+ ++A+ L++ + + D +T + +
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GLCK ++++A E+++ ++ P V TY +L K ++ A ++ + M+ +GI
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P + Y L+ G K L ++ +L +G V TY +I G C G+ D+A A
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+M + G T + I +LF+ D+A LL++++ LL
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLL 678
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 153/287 (53%), Gaps = 22/287 (7%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+T+I K + +N +L E+ A+ ++P V TY LI+G+C +G + +A +M
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ K I +V S + ++L + K+ EA +L +V + L+ GY + E
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQ---------KIVDFDLLLPGYQSLKEF 688
Query: 121 NKA------------EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HT 167
+A E + N+ + L P+ Y++ I GLCK ++DA LF + +
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ PD TY+ LI G +G I+ A+ L +EM +G+ PN++TY++L+ LCK +VD
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
A L+ K+ +GI P+ TY L+DGL K G + +A + + ++ KG
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 191/377 (50%), Gaps = 32/377 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I+ LCK+ + A M I P +VTY TL+ GF + G+++ A ++++M
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 62 VKSINPDVYTFSILVDALCKEGK----VKEAKNVLAV----------------------- 94
K PD+ T++ ++ +C EG+ ++E K + V
Sbjct: 288 SKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 95 -----MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
M+K G P TY++L+ G + N++ AE + + + D +Y+I+ING
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
C+ A L +M T+ I P TY+SLI LC+ + +A EL ++ +G+ P++
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
+ ++L+D C ++D A SL+K+M I PD TY L+ GLC G+ ++A+E+ +
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+ +G D +Y +I+G K G A + +M G P +TY ++ L + +
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Query: 330 NDKAEKLLRQMIARGLL 346
+ AE+LLR+M + G++
Sbjct: 588 GELAEELLREMKSEGIV 604
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 190/380 (50%), Gaps = 38/380 (10%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ ++ C+ ++V++A + M K P T +++ + +++ A M
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I +VYTF+I+++ LCKEGK+K+AK L +M G KP +VTY++L+ G+ L +
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A I + M PD+Q+Y+ +++ +C + L ++M + PD V+Y+ L
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNIL 333
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G +G + A+ +EM +G+ P TY++L+ L + ++ A LI++++ +GI
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 241 LPDVYTYTILLDGLCKGG-----------------------------------RLKDAQE 265
+ D TY IL++G C+ G + ++A E
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
+F+ ++ KG D+ +++G C G D A +L+ +M+ PD VTY ++ L
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 326 QEGDNDKAEKLLRQMIARGL 345
EG ++A +L+ +M RG+
Sbjct: 514 GEGKFEEARELMGEMKRRGI 533
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 144/253 (56%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I L + + A L E+ K I D VTY LI+G+C G K+A L ++M+
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I P +T++ L+ LC++ K +EA + ++ G KPD+V ++LMDG+C + ++
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M M + PD +Y+ ++ GLC ++A L +M I PD ++Y++LI
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G K G A+ + +EM S G P ++TY++LL L KN + A L+++MK +GI+
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Query: 242 PDVYTYTILLDGL 254
P+ ++ +++ +
Sbjct: 605 PNDSSFCSVIEAM 617
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 168/323 (52%), Gaps = 3/323 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ I+ +C + A + EM + PD V+Y LI G G L+ A ++MV
Sbjct: 298 YNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV 354
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + P YT++ L+ L E K++ A+ ++ + + G D VTY+ L++GYC +
Sbjct: 355 KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAK 414
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + + M + P +Y+ +I LC+ +A LF+++ + + PD+V ++L+
Sbjct: 415 KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLM 474
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DG C G + A+ L+ EM + P+ +TY+ L+ LC + A L+ +MK +GI
Sbjct: 475 DGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK 534
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD +Y L+ G K G K A V ++L G+N + TY ++ GL K+ + A L
Sbjct: 535 PDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEEL 594
Query: 302 MSKMEDNGCTPDAVTYEIIIYAL 324
+ +M+ G P+ ++ +I A+
Sbjct: 595 LREMKSEGIVPNDSSFCSVIEAM 617
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 100 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 159
E + + L+ C + V++A + F M P ++ + ++ L ++ +++A
Sbjct: 151 ETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAW 210
Query: 160 NLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
+ M+ I +V T++ +I+ LCK G++ A + M G+ P ++TY++L+
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 220 CKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 279
++ A +I +MK +G PD+ TY +L +C GR A EV +++ G D
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDS 327
Query: 280 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
+Y I+I G +G + A A +M G P TY +I+ LF E + AE L+R+
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 340 MIARGLL 346
+ +G++
Sbjct: 388 IREKGIV 394
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 160 NLFKQM---HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 216
NLF ++ H T + + L+ C+ + +A E M +G P T + +L
Sbjct: 138 NLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHIL 197
Query: 217 DALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 276
L + + ++NA M I +VYT+ I+++ LCK G+LK A+ + + G
Sbjct: 198 TLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIK 257
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
+ TY ++ G G + A ++S+M+ G PD TY I+ + EG +A ++
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEV 314
Query: 337 LRQMIARGLL 346
LR+M GL+
Sbjct: 315 LREMKEIGLV 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
M +T++D C ++ A++L EM I+PD VTY L+ G C G+ +EA L+ +M
Sbjct: 469 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I PD +++ L+ K+G K A V M+ G P ++TY++L+ G E
Sbjct: 529 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEG 588
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
AE++ M + P+ S+ +I + +
Sbjct: 589 ELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 197/380 (51%), Gaps = 40/380 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+ K+ + +A + +M + ++ LI G+C G +A G+ ++M+
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I P T++I + ALC G++ +A+ +L+ M PDVV+Y++LM GY + +
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFV 391
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F+ + ++ P + +Y+ +I+GLC+ ++ A L ++M T+ I PDV+TY++L+
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSS--------------------------- 214
G K+G +S A E+ +EM +G+ P+ Y++
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511
Query: 215 ---------LLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
+D LCK ++ AI +K+ G++PD TYT ++ G + G+ K A+
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
++ ++L K V TY ++I G K G ++A ++M+ G P+ +T+ ++Y +
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 631
Query: 326 QEGDNDKAEKLLRQMIARGL 345
+ G+ D+A + L +M G+
Sbjct: 632 KAGNIDEAYRYLCKMEEEGI 651
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 5/345 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T++DS K + ++ EM + I VTY LI+GF G+++EA M
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
Y+F+ L++ CK+G +A V M+ G P TY+ + C ++
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ ++M APDV SY+ +++G K+ +A LF + +I P +VTY++LI
Sbjct: 361 DARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
DGLC+SG + A L EM ++ + P+VITY++L+ KN ++ A + +M +GI
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMINGLCKDGLFDEALA 300
PD Y YT G + G A + ++++ ++ D+ Y + I+GLCK G +A+
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
K+ G PD VTY +I + G A L +M+ + L
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 158/292 (54%), Gaps = 1/292 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+ID LC+ + A L EM + I PDV+TYTTL+ GF G L A + ++M+
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK-PDVVTYSSLMDGYCLVNEV 120
K I PD Y ++ + G +A + M+ PD+ Y+ +DG C V +
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA + + R+ L PD +Y+ +I G + A NL+ +M + + P V+TY L
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G K+GR+ A++ EM RG+ PNV+T+++LL +CK ++D A + KM+ +GI
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
P+ Y+YT+L+ C + ++ ++++++L K D T+ + L KD
Sbjct: 652 PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 177/342 (51%), Gaps = 1/342 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ K +A L+ ++ A I P +VTY TLI G C G L+ A L +M
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I PDV T++ LV K G + A V M++ G KPD Y++ G + + +
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 122 KAEDIFNTMTRMEL-APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA + M + APD+ Y++ I+GLCK+ + A+ +++ + PD VTY+++
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G ++G+ A L +EM + L P+VITY L+ K ++ A +MK +G+
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+V T+ LL G+CK G + +A + +G + +YT++I+ C ++E +
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVK 676
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
L +M D PD T+ + L ++ ++ + E L R +++
Sbjct: 677 LYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLLS 718
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 4/289 (1%)
Query: 57 LNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
+M+ K P V +I++ L + +A V MI+ G P V+T+++++D
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
++ + + I+ M R + +Y+I+ING K +++A M +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
++ LI+G CK G DAW + +EM + G+ P TY+ + ALC +D+A L+ M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
PDV +Y L+ G K G+ +A +F DL + + TY +I+GLC+ G +
Sbjct: 371 ----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
A L +M PD +TY ++ + G+ A ++ +M+ +G+
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 100/186 (53%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ ID LCK + A ++ + PD VTYTT+I G+ GQ K A L ++M
Sbjct: 517 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 576
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ K + P V T+ +L+ K G++++A M K G +P+V+T+++L+ G C +
Sbjct: 577 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 636
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A M + P+ SY+++I+ C + ++ + L+K+M + I PD T+ +L
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Query: 181 IDGLCK 186
L K
Sbjct: 697 FKHLEK 702
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%)
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
K M + L F++M + P V + ++ L S ++ A + M G+ P VI
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
T++++LD+ K ++ + +MK + I TY IL++G K G++++A+ D+
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
G+ + ++ +I G CK GLFD+A + +M + G P TY I I AL G
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 331 DKAEKLLRQMIA 342
D A +LL M A
Sbjct: 360 DDARELLSSMAA 371
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 181/387 (46%), Gaps = 51/387 (13%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV----------------VTYTTLISGFC 45
YS +ID CK V A ++ M + PDV VTY L+ GFC
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 46 IVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 105
+++EA LL+ M ++ P+ + L+D LCK GK+ EA+ V M + G +
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 106 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 165
TYSSL+D Y V + A + + M AP+V Y+ MI+GLCK+ D+A L + M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 166 HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
+ P+VVTY+++IDG G+I EL+ M S+G+ PN +TY L+D CKN +
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 226 DNAISLIKKMKHQ------------------------GIL---------PDVYTYTILLD 252
D A +L+++MK G+L P + Y +L+D
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLID 890
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 310
L K RL+ A + +++ L TY +I LC + A L S+M G
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
Query: 311 TPDAVTYEIIIYALFQEGDNDKAEKLL 337
P+ ++ +I LF+ +A LL
Sbjct: 951 IPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 190/433 (43%), Gaps = 92/433 (21%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG----------------- 43
Y+ +I LC+ L +A + + M A P+VVTY+TL+ G
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363
Query: 44 ------------------FCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDA------- 78
+C G A LL +MV P ++IL+ +
Sbjct: 364 MMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDS 423
Query: 79 ----------------------------------LCKEGKVKEAKNVLAVMIKGGEKPDV 104
LC GK ++A +V+ MI G PD
Sbjct: 424 LNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDT 483
Query: 105 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 164
TYS +++ C +++ A +F M R L DV +Y+IM++ CK +++ A F +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
M TP+VVTY++LI K+ ++S A EL M S G PN++TYS+L+D CK
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 225 VDNAISLIKKMKHQGILPD----------------VYTYTILLDGLCKGGRLKDAQEVFQ 268
V+ A + ++M +PD V TY LLDG CK R+++A+++
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 269 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
+ ++G + Y +I+GLCK G DEA + ++M ++G TY +I F+
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 329 DNDKAEKLLRQMI 341
D A K+L +M+
Sbjct: 724 RQDLASKVLSKML 736
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 171/391 (43%), Gaps = 48/391 (12%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAK----RISPDVVTYTTLISGFCIVGQLKEAVGL 56
++ ++ L + N ++++ E L + R P TY LI F +L A +
Sbjct: 198 VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 257
Query: 57 LNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
+M + ++ D +T +LCK GK +EA L ++ PD V Y+ L+ G C
Sbjct: 258 HREMSLANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCE 314
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
+ +A D N M P+V +YS ++ G K + + M E P
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY------------------------ 212
++SL+ C SG S A++L+ +M G P + Y
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 213 -----------------SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
SS LC + A S+I++M QG +PD TY+ +L+ LC
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
+++ A +F+++ G DV TYTIM++ CK GL ++A ++M + GCTP+ V
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
TY +I+A + A +L M++ G L
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 166/311 (53%), Gaps = 7/311 (2%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +ID LCK +++A + +EM + TY++LI + V + A +L++M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ S P+V ++ ++D LCK GK EA ++ +M + G +P+VVTY++++DG+ ++ ++
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++ M +AP+ +Y ++I+ CK +D A NL ++M + Y +
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK-HQG 239
I+G K ++ L++E+ P + Y L+D L K ++ A+ L++++
Sbjct: 856 IEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 240 ILPDV-YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
L D TY L++ LC +++ A ++F ++ KG +++++ +I GL ++ EA
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Query: 299 LALM---SKME 306
L L+ S ME
Sbjct: 974 LLLLDFISHME 984
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 134/242 (55%), Gaps = 4/242 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +ID LCK ++AY L M K P+VVTYT +I GF ++G+++ + LL +M
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + P+ T+ +L+D CK G + A N+L M + Y +++G+ E
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEF 863
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT--PDVVTYS 178
++ + + + + + AP + Y ++I+ L K + ++ AL L +++ T + T TY+
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYN 923
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
SLI+ LC + ++ A++L +EM +G+ P + ++ SL+ L +N + A+ L+ + H
Sbjct: 924 SLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
Query: 239 GI 240
I
Sbjct: 984 EI 985
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 32/285 (11%)
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 131
+S L D+L G V NV V+ ++T SS+ D + + V+ +D+F +
Sbjct: 72 YSFLHDSLVDYGNV----NVHQVV-------PIITQSSI-DARAIADAVSGVDDVFGRKS 119
Query: 132 RMELAPDVQ--SYSIMINGLCKIKMVDDALNLF----KQMHTENITPDVVTYSSLIDGLC 185
+ L + S S++I L I ++ F +Q+ ++ P Y++L+D +
Sbjct: 120 QKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAP---VYNALVDLIV 176
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL----CKNHHVDNAISLIKKMKHQGIL 241
+ D ++ E + + + L+ L C+N A+ + ++K
Sbjct: 177 RD----DDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFR 232
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P TY L+ K RL A + +++ + +D T LCK G + EAL L
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+E PD V Y +I L + ++A L +M A L
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 184/337 (54%), Gaps = 4/337 (1%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++ +LCK + AY + E+ + + P++VTYTT++ G+ G ++ A +L +M+ +
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
PD T+++L+D CK G+ EA V+ M K +P+ VTY ++ C + +A
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
++F+ M PD +I+ LC+ VD+A L+++M N PD S+LI L
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 376
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
CK GR+++A +L +E +G P+++TY++L+ +C+ + A L M + P+
Sbjct: 377 CKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNA 435
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
+TY +L++GL K G +K+ V +++L G + T+ I+ GL K G ++A+ ++S
Sbjct: 436 FTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSM 495
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
NG D ++E+ + G+ DK L++++
Sbjct: 496 AVMNGKV-DKESWELFLKKF--AGELDKGVLPLKELL 529
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 151/280 (53%), Gaps = 1/280 (0%)
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
I P+++T ++LV ALCK+ ++ A VL + G P++VTY++++ GY ++ A+
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+ M PD +Y+++++G CK+ +A + M I P+ VTY +I L
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
CK + +A + +EM R P+ ++DALC++H VD A L +KM +PD
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
+ L+ LCK GR+ +A+++F D KG + TY +I G+C+ G EA L
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
M + C P+A TY ++I L + G+ + ++L +M+ G
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 163/315 (51%), Gaps = 1/315 (0%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
I+P++ T L+ C ++ A +L+++ + P++ T++ ++ G ++ AK
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
VL M+ G PD TY+ LMDGYC + ++A + + M + E+ P+ +Y +MI L
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
CK K +A N+F +M + PD +ID LC+ ++ +A L +M P+
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
S+L+ LCK V A L + + +G +P + TY L+ G+C+ G L +A ++ D
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+ + + TY ++I GL K+G E + ++ +M + GC P+ T+ I+ L + G
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 330 NDKAEKLLRQMIARG 344
+ A K++ + G
Sbjct: 486 EEDAMKIVSMAVMNG 500
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 156/285 (54%), Gaps = 2/285 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+TI+ + A + EML + PD TYT L+ G+C +G+ EA +++ M
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I P+ T+ +++ ALCKE K EA+N+ M++ PD ++D C ++V+
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++ M + PD S +I+ LCK V +A LF + +I P ++TY++LI
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLI 407
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G+C+ G +++A L ++M+ R PN TY+ L++ L KN +V + ++++M G
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
P+ T+ IL +GL K G+ +DA ++ ++ G +D ++ + +
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFL 511
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%)
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
N+ + P++ + ++++ LCK ++ A + ++ + + P++VTY++++ G
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
G + A ++ EM RG P+ TY+ L+D CK A +++ M+ I P+ TY
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+++ LCK + +A+ +F ++L + + D +I+ LC+D DEA L KM
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
N C PD +I+ L +EG +A KL
Sbjct: 360 NNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 110/192 (57%), Gaps = 1/192 (0%)
Query: 156 DDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV-NEMHSRGLPPNVITYSS 214
+ ++ +F ++ + V + ++L++ L ++ R + N S G+ PN+ T +
Sbjct: 137 ESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNL 196
Query: 215 LLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
L+ ALCK + +++A ++ ++ G++P++ TYT +L G G ++ A+ V +++L +G
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 275 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAE 334
+ D TYT++++G CK G F EA +M ME N P+ VTY ++I AL +E + +A
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 335 KLLRQMIARGLL 346
+ +M+ R +
Sbjct: 317 NMFDEMLERSFM 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ ST+I LCK+ V +A L+ E I P ++TY TLI+G C G+L EA L + M
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P+ +T+++L++ L K G VKE VL M++ G P+ T+ L +G + ++
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG---LQKL 483
Query: 121 NKAEDIFN--TMTRMELAPDVQSYSIMI 146
K ED +M M D +S+ + +
Sbjct: 484 GKEEDAMKIVSMAVMNGKVDKESWELFL 511
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 170/322 (52%), Gaps = 14/322 (4%)
Query: 19 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDA 78
++ S+ +A+ ++ +T + S F I G S PD+ + S D
Sbjct: 35 FSSVSKGVARVLASTQITLSPKDSAFTITGS--------------SWKPDLDSGSFSDDP 80
Query: 79 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 138
E + ++ + L ++ GG KP+V + L+ C N + KA + M + PD
Sbjct: 81 RSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPD 140
Query: 139 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN 198
+Y+ ++N LCK V A+ L ++M + VTY++L+ GLC G ++ + + V
Sbjct: 141 ASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVE 200
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
+ +GL PN TYS LL+A K D A+ L+ ++ +G P++ +Y +LL G CK G
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYE 318
R DA +F++L KG+ +V +Y I++ LC DG ++EA +L+++M+ P VTY
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 319 IIIYALFQEGDNDKAEKLLRQM 340
I+I +L G ++A ++L++M
Sbjct: 321 ILINSLAFHGRTEQALQVLKEM 342
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 162/309 (52%), Gaps = 4/309 (1%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
++D+++ ++ P+V T L+ C +LK+A+ ++ MV I PD ++
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
LV+ LCK G V A ++ M G + VTY++L+ G C++ +N++ + +
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
LAP+ +YS ++ K + D+A+ L ++ + P++V+Y+ L+ G CK GR DA
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
L E+ ++G NV++Y+ LL LC + + A SL+ +M P V TY IL++ L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 255 CKGGRLKDAQEVFQDLLIKG---YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
GR + A +V ++ + KG + + +Y +I LCK+G D + + +M C
Sbjct: 327 AFHGRTEQALQVLKE-MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 312 PDAVTYEII 320
P+ TY I
Sbjct: 386 PNEGTYNAI 394
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 183/382 (47%), Gaps = 42/382 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++ LCK V A L +M + VTY L+ G C++G L +++ + +++
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVL-AVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + P+ +T+S L++A KE EA +L +++KGGE P++V+Y+ L+ G+C
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGE-PNLVSYNVLLTGFCKEGRT 262
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A +F + +V SY+I++ LC ++A +L +M + P VVTY+ L
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
Query: 181 IDGLCKSGRISDAWELVNEMHSRG---LPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
I+ L GR A +++ EM S+G +Y+ ++ LCK VD + + +M +
Sbjct: 323 INSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 238 QGILPDVYTYTIL-----------------------------------LDGLCKGGRLKD 262
+ P+ TY + + LC+ G
Sbjct: 382 RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFA 441
Query: 263 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN-GCTPDAVTYEIII 321
A ++ ++ G++ D TY+ +I GLC +G+F A+ ++S ME++ C P + +I
Sbjct: 442 AFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMI 501
Query: 322 YALFQEGDNDKAEKLLRQMIAR 343
L + D A ++ M+ +
Sbjct: 502 LGLCKIRRTDLAMEVFEMMVEK 523
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 179/350 (51%), Gaps = 7/350 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS ++++ K++ ++A L E++ K P++V+Y L++GFC G+ +A+ L ++
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K +V +++IL+ LC +G+ +EA ++LA M G P VVTY+ L++
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 122 KAEDIFNTMTR--MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+A + M++ + SY+ +I LCK VD + +M P+ TY++
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 180 LIDGLCK-SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
I LC+ + ++ +A+ ++ + ++ Y S++ +LC+ + A L+ +M
Sbjct: 394 -IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRC 452
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD--VRTYTIMINGLCKDGLFD 296
G PD +TY+ L+ GLC G A EV ++ + N V + MI GLCK D
Sbjct: 453 GFDPDAHTYSALIRGLCLEGMFTGAMEVL-SIMEESENCKPTVDNFNAMILGLCKIRRTD 511
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
A+ + M + P+ TY I++ + E + + A+++L ++ R ++
Sbjct: 512 LAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVI 561
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 110/217 (50%)
Query: 129 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
T+T PD+ S S + + D+ + + + T P+V + L+ LCK+
Sbjct: 61 TITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKAN 120
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
R+ A ++ M S G+ P+ Y+ L++ LCK +V A+ L++KM+ G + TY
Sbjct: 121 RLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYN 180
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 308
L+ GLC G L + + + L+ KG + TY+ ++ K+ DEA+ L+ ++
Sbjct: 181 ALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK 240
Query: 309 GCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G P+ V+Y +++ +EG D A L R++ A+G
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 182/345 (52%), Gaps = 2/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEM-LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++T+ID LCK + +A L M L +R +P+ VTY LI G+C G+L+ A ++++M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I P+V T + +V +C+ + A M K G K +VVTY +L+ C V+ V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA + M +PD + Y +I+GLC+++ DA+ + +++ + D++ Y+ L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I C +E++ +M G P+ ITY++L+ K+ ++ ++++M+ G+
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
P V TY ++D C G L +A ++F+D+ L N + Y I+IN K G F +AL
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+L +M+ P+ TY + L ++ + KL+ +M+ +
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 187/358 (52%), Gaps = 23/358 (6%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ I SLCK+ N A+++ S+++ + + + L+S C+ + + +N +V+
Sbjct: 263 TRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMD--ISRMNDLVL 318
Query: 63 K----SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-------KPDVVTYSSLM 111
K I PDV T IL++ LCK +V EA V M +G K D + +++L+
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM-RGKRTDDGNVIKADSIHFNTLI 377
Query: 112 DGYCLVNEVNKAEDIFNTMTRMEL----APDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
DG C V + +AE++ + RM+L AP+ +Y+ +I+G C+ ++ A + +M
Sbjct: 378 DGLCKVGRLKEAEEL---LVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ I P+VVT ++++ G+C+ ++ A +M G+ NV+TY +L+ A C +V+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A+ +KM G PD Y L+ GLC+ R DA V + L G++LD+ Y ++I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
C ++ +++ ME G PD++TY +I + D + E+++ QM GL
Sbjct: 555 LFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 176/347 (50%), Gaps = 9/347 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ L ++ ++ +L +M +I PDVVT LI+ C ++ EA+ + +M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 62 VKS------INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK--PDVVTYSSLMDG 113
K I D F+ L+D LCK G++KEA+ +L V +K E+ P+ VTY+ L+DG
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL-VRMKLEERCAPNAVTYNCLIDG 415
Query: 114 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
YC ++ A+++ + M E+ P+V + + ++ G+C+ ++ A+ F M E + +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
VVTY +LI C + A +M G P+ Y +L+ LC+ +AI +++
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
K+K G D+ Y +L+ C + E+ D+ +G D TY +I+ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 294 LFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
F+ +M +M ++G P TY +I A G+ D+A KL + M
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 186/357 (52%), Gaps = 17/357 (4%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAK-------RISPDVVTYTTLISGFCIVGQLKEAVG 55
+ ++D L ++ LV+DA+ + EML K RI+ D+V + + G + + + +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH-EVWKGRLLTEE--KIIA 245
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
L+++ ++P+ + + +LCK + A ++L+ ++K + +++L+
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN------ 169
++++ D+ M +++ PDV + I+IN LCK + VD+AL +F++M +
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV 365
Query: 170 ITPDVVTYSSLIDGLCKSGRISDAWELVNEMH-SRGLPPNVITYSSLLDALCKNHHVDNA 228
I D + +++LIDGLCK GR+ +A EL+ M PN +TY+ L+D C+ ++ A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
++ +MK I P+V T ++ G+C+ L A F D+ +G +V TY +I+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
C ++A+ KM + GC+PDA Y +I L Q + A +++ ++ G
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T+I + C V A Y +ML SPD Y LISG C V + +A+ ++ ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ D+ +++L+ C + ++ +L M K G+KPD +TY++L+ + +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM--HTENITPDVVTYSS 179
E + M L P V +Y +I+ C + +D+AL LFK M H++ + P+ V Y+
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNI 657
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LI+ K G A L EM + + PNV TY++L L + + + L+ +M Q
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
P+ T IL++ L L ++ Q
Sbjct: 718 CEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 156/339 (46%), Gaps = 48/339 (14%)
Query: 11 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVY 70
+DKL+ LY K I VV LI F +G + ++V + ++ N V
Sbjct: 133 RDKLLR----LYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR 188
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
+++VD L + G V +A VL M++ E +F
Sbjct: 189 --NVVVDVLLRNGLVDDAFKVLDEMLQ-------------------------KESVF--- 218
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDA--LNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
P+ + I+++ + K +++ + + L + + ++P+ V + I LCK+
Sbjct: 219 -----PPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
R + AW++++++ P +++LL L +N + L+ KM I PDV T
Sbjct: 274 RANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYN------LDVRTYTIMINGLCKDGLFDEALALM 302
IL++ LCK R+ +A EVF+ + K + D + +I+GLCK G EA L+
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 303 SKME-DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M+ + C P+AVTY +I + G + A++++ +M
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +I LC+ + +DA + ++ S D++ Y LI FC ++ +L M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD T++ L+ K + + ++ M + G P V TY +++D YC V E+
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 121 NKAEDIFNTM-TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
++A +F M ++ P+ Y+I+IN K+ AL+L ++M + + P+V TY++
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
L L + + +L++EM + PN IT L++ L
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 181/345 (52%), Gaps = 2/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEM-LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++T+ID LCK + +A L M L +R P+ VTY LI G+C G+L+ A ++++M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I P+V T + +V +C+ + A M K G K +VVTY +L+ C V+ V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA + M +PD + Y +I+GLC+++ DA+ + +++ + D++ Y+ L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I C +E++ +M G P+ ITY++L+ K+ ++ ++++M+ G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
P V TY ++D C G L +A ++F+D+ L N + Y I+IN K G F +AL
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+L +M+ P+ TY + L ++ + KL+ +M+ +
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 186/358 (51%), Gaps = 23/358 (6%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ I SLCK+ N A+++ S+++ + + + L+S C+ + + +N +V+
Sbjct: 263 TRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMD--ISRMNDLVL 318
Query: 63 K----SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-------KPDVVTYSSLM 111
K I PDV T IL++ LCK +V EA V M +G K D + +++L+
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM-RGKRTDDGNVIKADSIHFNTLI 377
Query: 112 DGYCLVNEVNKAEDIFNTMTRMEL----APDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
DG C V + +AE++ + RM+L P+ +Y+ +I+G C+ ++ A + +M
Sbjct: 378 DGLCKVGRLKEAEEL---LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ I P+VVT ++++ G+C+ ++ A +M G+ NV+TY +L+ A C +V+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A+ +KM G PD Y L+ GLC+ R DA V + L G++LD+ Y ++I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
C ++ +++ ME G PD++TY +I + D + E+++ QM GL
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 176/347 (50%), Gaps = 9/347 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ L ++ ++ +L +M +I PDVVT LI+ C ++ EA+ + QM
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 62 VKS------INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK--PDVVTYSSLMDG 113
K I D F+ L+D LCK G++KEA+ +L V +K E+ P+ VTY+ L+DG
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL-VRMKLEERCVPNAVTYNCLIDG 415
Query: 114 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
YC ++ A+++ + M E+ P+V + + ++ G+C+ ++ A+ F M E + +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
VVTY +LI C + A +M G P+ Y +L+ LC+ +AI +++
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
K+K G D+ Y +L+ C + E+ D+ +G D TY +I+ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 294 LFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
F+ +M +M ++G P TY +I A G+ D+A KL + M
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 183/357 (51%), Gaps = 17/357 (4%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAK-------RISPDVVTYTTLISGFCIVGQLKEAVG 55
+ ++D L ++ LV+DA+ + EML K RI+ D+V + ++ +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI---IA 245
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
L+++ ++P+ + + +LCK + A ++L+ ++K + +++L+
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN------ 169
++++ D+ M +++ PDV + I+IN LCK + VD+AL +F+QM +
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 170 ITPDVVTYSSLIDGLCKSGRISDAWELVNEMH-SRGLPPNVITYSSLLDALCKNHHVDNA 228
I D + +++LIDGLCK GR+ +A EL+ M PN +TY+ L+D C+ ++ A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
++ +MK I P+V T ++ G+C+ L A F D+ +G +V TY +I+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
C ++A+ KM + GC+PDA Y +I L Q + A +++ ++ G
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T+I + C V A Y +ML SPD Y LISG C V + +A+ ++ ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ D+ +++L+ C + ++ +L M K G+KPD +TY++L+ + +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM--HTENITPDVVTYSS 179
E + M L P V +Y +I+ C + +D+AL LFK M H++ + P+ V Y+
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNI 657
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LI+ K G A L EM + + PNV TY++L L + + + L+ +M Q
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
P+ T IL++ L L ++ Q
Sbjct: 718 CEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 48/339 (14%)
Query: 11 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVY 70
+DKL+ LY K I +V LI F +G + ++V + ++ N V
Sbjct: 133 RDKLLR----LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR 188
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
+++VD L + G V +A VL M++ E +F
Sbjct: 189 --NVVVDVLLRNGLVDDAFKVLDEMLQ-------------------------KESVF--- 218
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDA--LNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
P+ + I+++ + K +++ + + L + + ++P+ V + I LCK+
Sbjct: 219 -----PPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
R + AW++++++ P +++LL L +N + L+ KM I PDV T
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYN------LDVRTYTIMINGLCKDGLFDEALALM 302
IL++ LCK R+ +A EVF+ + K + D + +I+GLCK G EA L+
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 303 SKME-DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M+ + C P+AVTY +I + G + A++++ +M
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 1/220 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +I LC+ + +DA + ++ S D++ Y LI FC ++ +L M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD T++ L+ K + + ++ M + G P V TY +++D YC V E+
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 121 NKAEDIFNTM-TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
++A +F M ++ P+ Y+I+IN K+ AL+L ++M + + P+V TY++
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
L L + + +L++EM + PN IT L++ L
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 186/349 (53%), Gaps = 3/349 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++ II++ + ++ A ++ +M P T+ TLI G+ +G+L+E+ LL+ M
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 61 VV-KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+ + + P+ T +ILV A C + K++EA N++ M G KPDVVT+++L Y +
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 120 VNKAED-IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
AED I M ++ P+V++ ++NG C+ +++AL F +M + P++ ++
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
SLI G + E+V+ M G+ P+V+T+S+L++A + + M
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
GI PD++ ++IL G + G + A+++ + G +V YT +I+G C G +A
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Query: 299 LALMSKMED-NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ + KM G +P+ TYE +I+ + KAE+LL+ M + ++
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 184/375 (49%), Gaps = 37/375 (9%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ +++ L + +A+++++ ++ + P ++TYTTL++ + L++++
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ PD F+ +++A + G + +A + M + G KP T+++L+ GY + ++ +
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 123 AEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL- 180
+ + + M R E L P+ ++ +I++ C + +++A N+ +M + + PDVVT+++L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 181 -----------------------------------IDGLCKSGRISDAWELVNEMHSRGL 205
++G C+ G++ +A M G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
PN+ ++SL+ + +D ++ M+ G+ PDV T++ L++ G +K +E
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
++ D+L G + D+ ++I+ G + G ++A ++++M G P+ V Y II
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 326 QEGDNDKAEKLLRQM 340
G+ KA ++ ++M
Sbjct: 683 SAGEMKKAMQVYKKM 697
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL-NQMVVK 63
++ + C + + +A+N+ +M + + PDVVT+ TL + +G A ++ +M+
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
+ P+V T +V+ C+EGK++EA M + G P++ ++SL+ G+ +N+++
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
++ + M + PDV ++S ++N + + ++ M I PD+ +S L G
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILP 242
++G A +++N+M G+ PNV+ Y+ ++ C + A+ + KKM G+ P
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSP 705
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
++ TY L+ G + + A+E+ +D+ K +T ++ +G
Sbjct: 706 NLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 158/315 (50%), Gaps = 2/315 (0%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
DV + T L++G G+ +EA + N ++ + P + T++ LV AL ++ +++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
+ + K G KPD + ++++++ +++A IF M P +++ +I G KI
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 153 KMVDDALNLFKQM-HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
++++ L M E + P+ T + L+ C +I +AW +V +M S G+ P+V+T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 212 YSSLLDALCKNHHVDNAISL-IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
+++L A + A + I +M H + P+V T +++G C+ G++++A F +
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
G + ++ + +I G D ++ ME+ G PD VT+ ++ A GD
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 331 DKAEKLLRQMIARGL 345
+ E++ M+ G+
Sbjct: 618 KRCEEIYTDMLEGGI 632
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 7/219 (3%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK---EAVGLLNQM 60
TI++ C++ + +A + M + P++ + +LI GF + + E V L+ +
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
VK PDV TFS L++A G +K + + M++GG PD+ +S L GY E
Sbjct: 596 GVK---PDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEP 652
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPDVVTYSS 179
KAE I N M + + P+V Y+ +I+G C + A+ ++K+M ++P++ TY +
Sbjct: 653 EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYET 712
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
LI G ++ + A EL+ +M + + P T + D
Sbjct: 713 LIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 124/289 (42%), Gaps = 39/289 (13%)
Query: 81 KEGKVKEAKNVLAVMIKGGEK-PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 139
+EG+V + ++ V+ GG DV + + LM+G +A IFNT+ P +
Sbjct: 296 EEGRV-QLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSL 354
Query: 140 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNE 199
+Y+ ++ L + K L+L ++ + PD + ++++I+ +SG + A ++ +
Sbjct: 355 ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 200 MHSRGLPPNVITYSSLL------------------------------------DALCKNH 223
M G P T+++L+ A C
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 224 HVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE-VFQDLLIKGYNLDVRTY 282
++ A +++ KM+ G+ PDV T+ L + G A++ + +L +VRT
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
++NG C++G +EAL +M++ G P+ + +I D D
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 35/174 (20%)
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
DV + + L++GL + GR +A + N + G P++ITY++L+ AL + H + +SLI
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 233 KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
K++ G+ PD TIL + + IN +
Sbjct: 378 SKVEKNGLKPD----TILFNAI-------------------------------INASSES 402
Query: 293 GLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G D+A+ + KM+++GC P A T+ +I + G +++ +LL M+ +L
Sbjct: 403 GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 180/342 (52%), Gaps = 2/342 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEM-LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++T+ID LCK + +A L M L +R P+ VTY LI G+C G+L+ A ++++M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I P+V T + +V +C+ + A M K G K +VVTY +L+ C V+ V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA + M +PD + Y +I+GLC+++ DA+ + +++ + D++ Y+ L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I C +E++ +M G P+ ITY++L+ K+ ++ ++++M+ G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
P V TY ++D C G L +A ++F+D+ L N + Y I+IN K G F +AL
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
+L +M+ P+ TY + L ++ + KL+ +M+
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 186/358 (51%), Gaps = 23/358 (6%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ I SLCK+ N A+++ S+++ + + + L+S C+ + + +N +V+
Sbjct: 263 TRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMD--ISRMNDLVL 318
Query: 63 K----SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-------KPDVVTYSSLM 111
K I PDV T IL++ LCK +V EA V M +G K D + +++L+
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM-RGKRTDDGNVIKADSIHFNTLI 377
Query: 112 DGYCLVNEVNKAEDIFNTMTRMEL----APDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
DG C V + +AE++ + RM+L P+ +Y+ +I+G C+ ++ A + +M
Sbjct: 378 DGLCKVGRLKEAEEL---LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ I P+VVT ++++ G+C+ ++ A +M G+ NV+TY +L+ A C +V+
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A+ +KM G PD Y L+ GLC+ R DA V + L G++LD+ Y ++I
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG 554
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
C ++ +++ ME G PD++TY +I + D + E+++ QM GL
Sbjct: 555 LFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 176/347 (50%), Gaps = 9/347 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ L ++ ++ +L +M +I PDVVT LI+ C ++ EA+ + QM
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 62 VKS------INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK--PDVVTYSSLMDG 113
K I D F+ L+D LCK G++KEA+ +L V +K E+ P+ VTY+ L+DG
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL-VRMKLEERCVPNAVTYNCLIDG 415
Query: 114 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
YC ++ A+++ + M E+ P+V + + ++ G+C+ ++ A+ F M E + +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
VVTY +LI C + A +M G P+ Y +L+ LC+ +AI +++
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
K+K G D+ Y +L+ C + E+ D+ +G D TY +I+ K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 294 LFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
F+ +M +M ++G P TY +I A G+ D+A KL + M
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 183/357 (51%), Gaps = 17/357 (4%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAK-------RISPDVVTYTTLISGFCIVGQLKEAVG 55
+ ++D L ++ LV+DA+ + EML K RI+ D+V + ++ +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI---IA 245
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
L+++ ++P+ + + +LCK + A ++L+ ++K + +++L+
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN------ 169
++++ D+ M +++ PDV + I+IN LCK + VD+AL +F+QM +
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 170 ITPDVVTYSSLIDGLCKSGRISDAWELVNEMH-SRGLPPNVITYSSLLDALCKNHHVDNA 228
I D + +++LIDGLCK GR+ +A EL+ M PN +TY+ L+D C+ ++ A
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
++ +MK I P+V T ++ G+C+ L A F D+ +G +V TY +I+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
C ++A+ KM + GC+PDA Y +I L Q + A +++ ++ G
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 156/339 (46%), Gaps = 48/339 (14%)
Query: 11 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVY 70
+DKL+ LY K I +V LI F +G + ++V + ++ N V
Sbjct: 133 RDKLLR----LYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR 188
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
+++VD L + G V +A VL M++ E +F
Sbjct: 189 --NVVVDVLLRNGLVDDAFKVLDEMLQ-------------------------KESVF--- 218
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDA--LNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
P+ + I+++ + K +++ + + L + + ++P+ V + I LCK+
Sbjct: 219 -----PPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
R + AW++++++ P +++LL L +N + L+ KM I PDV T
Sbjct: 274 RANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYN------LDVRTYTIMINGLCKDGLFDEALALM 302
IL++ LCK R+ +A EVF+ + K + D + +I+GLCK G EA L+
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 303 SKME-DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M+ + C P+AVTY +I + G + A++++ +M
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 101/201 (50%), Gaps = 1/201 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +I LC+ + +DA + ++ S D++ Y LI FC ++ +L M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD T++ L+ K + + ++ M + G P V TY +++D YC V E+
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 121 NKAEDIFNTM-TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
++A +F M ++ P+ Y+I+IN K+ AL+L ++M + + P+V TY++
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 180 LIDGLCKSGRISDAWELVNEM 200
L L + + +L++EM
Sbjct: 693 LFKCLNEKTQGETLLKLMDEM 713
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 176/345 (51%), Gaps = 2/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +IDSLC+ + + A + M +K + P +Y +I G C G A LL +
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P YT+ +L+++LCKE +A+NVL +M++ Y+ + G C+++
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI-TPDVVTYSSL 180
+ ++ +M + + PD + + +INGLCK+ VDDA+ + M T PD VT +++
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 181 IDGLCKSGRISDAWELVNE-MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+ GL GR +A +++N M + P V+ Y++++ L K H D A+S+ +++
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ D TY I++DGLC ++ A++ + D++ D Y + GLC+ G +A
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDAC 609
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+ + D+G P+ V Y +I + G +A ++L +M G
Sbjct: 610 HFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNG 654
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 12/349 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++ LC V DA+ L +M + PDVVT+TTLI G+C + +L+ A + ++M
Sbjct: 165 YNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMR 224
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP-----DVVTYSSLMDGYCL 116
V I P+ T S+L+ K V+ + ++ + + + +++L+D C
Sbjct: 225 VCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCR 284
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQ---SYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
N DIF M L V +Y MI+ LC+ + A + M ++ + P
Sbjct: 285 EGYFN---DIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPR 341
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
+Y+++I GLCK G A++L+ E P+ TY L+++LCK A ++++
Sbjct: 342 RTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLE 401
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
M + Y I L GLC + V +L D T +INGLCK G
Sbjct: 402 LMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMG 461
Query: 294 LFDEALALMSK-MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
D+A+ ++ M C PDAVT ++ L +G ++A +L +++
Sbjct: 462 RVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 170/381 (44%), Gaps = 42/381 (11%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV- 61
S++I SLC ++A+ + LA PD T +I+ +G++++++
Sbjct: 94 SSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIG 153
Query: 62 -VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K P + ++ L++ LC +V +A ++ M G PDVVT+++L+ GYC + E+
Sbjct: 154 FKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIREL 213
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-----HTENITPDVV 175
A +F+ M + P+ + S++I G K++ V+ L K++ + + +
Sbjct: 214 EVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAA 273
Query: 176 TYSSLIDGLCKSGRISDAWELVNE-----------------------------------M 200
+++L+D +C+ G +D +E+ M
Sbjct: 274 AFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIM 333
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
S+GL P +Y++++ LCK+ A L+++ P YTY +L++ LCK
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDT 393
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
A+ V + +L K R Y I + GLC E L ++ M C PD T +
Sbjct: 394 GKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTV 453
Query: 321 IYALFQEGDNDKAEKLLRQMI 341
I L + G D A K+L M+
Sbjct: 454 INGLCKMGRVDDAMKVLDDMM 474
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 37/286 (12%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +++SLCK+ A N+ ML K + Y + G C++ E + +L M+
Sbjct: 380 YKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSML 439
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEV 120
PD YT + +++ LCK G+V +A VL M+ G PD VT +++M G
Sbjct: 440 QGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRA 499
Query: 121 NKAEDIFN-TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+A D+ N M ++ P V +Y+ +I GL K+ D+A+++F Q+ ++T D TY+
Sbjct: 500 EEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAI 559
Query: 180 LIDGLC-----------------------------------KSGRISDAWELVNEMHSRG 204
+IDGLC +SG +SDA + ++ G
Sbjct: 560 IIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSG 619
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL 250
PNV+ Y++++ ++ A ++++M+ G PD T+ IL
Sbjct: 620 AIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 149/359 (41%), Gaps = 43/359 (11%)
Query: 28 KRISPDVVTYTTLISGFCIVGQ-LKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVK 86
+R D + I C V + EA+ +L+ + ++ PD S ++ +LC G+
Sbjct: 48 RRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFD 107
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT--RMELAPDVQSYSI 144
EA + + G PD T + ++ + + + + E P + +Y+
Sbjct: 108 EAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNR 167
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
++N LC I V DA L M PDVVT+++LI G C+ + A ++ +EM G
Sbjct: 168 LMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCG 227
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKK------------------------MKHQGI 240
+ PN +T S L+ K V+ L+K+ M +G
Sbjct: 228 IRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGY 287
Query: 241 LPDVY----------------TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
D++ Y ++D LC+ R A + + KG +Y
Sbjct: 288 FNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNA 347
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+I+GLCKDG A L+ + + P TY++++ +L +E D KA +L M+ +
Sbjct: 348 IIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRK 406
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 165/320 (51%), Gaps = 1/320 (0%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
ID + L ++L M + RI P T+ + + G+ +AV L M
Sbjct: 98 IDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGC 157
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
D+ +F+ ++D LCK +V++A + + +G D VTY+ +++G+CL+ KA +
Sbjct: 158 FQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALE 216
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+ M + P++ +Y+ M+ G + + A F +M + DVVTY++++ G
Sbjct: 217 VLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFG 276
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
+G I A + +EM G+ P+V TY++++ LCK +V+NA+ + ++M +G P+V
Sbjct: 277 VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT 336
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
TY +L+ GL G +E+ Q + +G + +TY +MI + ++AL L KM
Sbjct: 337 TYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Query: 306 EDNGCTPDAVTYEIIIYALF 325
C P+ TY I+I +F
Sbjct: 397 GSGDCLPNLDTYNILISGMF 416
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 151/261 (57%), Gaps = 1/261 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++TI+D LCK K V AY L+ L R S D VTY +++G+C++ + +A+ +L +MV
Sbjct: 164 FNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ INP++ T++ ++ + G+++ A M K + DVVTY++++ G+ + E+
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++F+ M R + P V +Y+ MI LCK V++A+ +F++M P+V TY+ LI
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GL +G S EL+ M + G PN TY+ ++ + V+ A+ L +KM L
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 242 PDVYTYTILLDGLCKGGRLKD 262
P++ TY IL+ G+ R +D
Sbjct: 403 PNLDTYNILISGMFVRKRSED 423
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 155/285 (54%), Gaps = 1/285 (0%)
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
L+++M I P TF+I+ + GK +A + M + G D+ ++++++D C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
V KA ++F + R + D +Y++++NG C IK AL + K+M I P++
Sbjct: 173 KSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
TY++++ G ++G+I AWE EM R +V+TY++++ + A ++ +M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
+G+LP V TY ++ LCK +++A +F++++ +GY +V TY ++I GL G F
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
LM +ME+ GC P+ TY ++I + + +KA L +M
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 1/243 (0%)
Query: 102 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 161
P T++ + + Y + +KA +F M D+ S++ +++ LCK K V+ A L
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 162 FKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 221
F+ + + D VTY+ +++G C R A E++ EM RG+ PN+ TY+++L +
Sbjct: 184 FRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 222 NHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 281
+ +A +MK + DV TYT ++ G G +K A+ VF +++ +G V T
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
Query: 282 YTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
Y MI LCK + A+ + +M G P+ TY ++I LF G+ + E+L+++M
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRME 362
Query: 342 ARG 344
G
Sbjct: 363 NEG 365
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 112/233 (48%), Gaps = 3/233 (1%)
Query: 116 LVNEVNKAEDIFNTM--TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
L N KA F+ + E D S+ + I+ ++ + +L +M + I P
Sbjct: 66 LWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 125
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
T++ + + +G+ A +L MH G ++ +++++LD LCK+ V+ A L +
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
++ + + D TY ++L+G C R A EV ++++ +G N ++ TY M+ G + G
Sbjct: 186 ALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 294 LFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
A +M+ C D VTY +++ G+ +A + +MI G+L
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 186/381 (48%), Gaps = 39/381 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I +CK +V++A L +M + P+V TYT LI GF I G++ EA+ L M
Sbjct: 218 YNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMR 277
Query: 62 VKSINPDVYT-----------------FSILVDALCKEGKVKE---------------AK 89
V+ +NP+ T F +LV + K+ ++ AK
Sbjct: 278 VRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAK 337
Query: 90 NVLAVMIKGGEK---PDVVTYSSLMDGYCLVNEVNKAE--DIFNTMTRMELAPDVQSYSI 144
+ K GE+ PD T+++ M CL+ + E IF+ + P Y +
Sbjct: 338 ETGQFLRKIGERGYIPDSSTFNAAMS--CLLKGHDLVETCRIFDGFVSRGVKPGFNGYLV 395
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
++ L + + KQM + + V +Y+++ID LCK+ RI +A + EM RG
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRG 455
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ PN++T+++ L V +++K+ G PDV T++++++ LC+ +KDA
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAF 515
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
+ F+++L G + TY I+I C G D ++ L +KM++NG +PD Y I +
Sbjct: 516 DCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 325 FQEGDNDKAEKLLRQMIARGL 345
+ KAE+LL+ M+ GL
Sbjct: 576 CKMRKVKKAEELLKTMLRIGL 596
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 35/380 (9%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +ID+L K ++ AY + +M + PD TY LI G C G + EA+ L+ QM
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG------- 113
+ P+V+T++IL+D G+V EA L +M P+ T + + G
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP 301
Query: 114 --------------------------YCLVNEVNKAE--DIFNTMTRMELAPDVQSYSIM 145
YCL N E + PD +++
Sbjct: 302 CKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAA 361
Query: 146 INGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
++ L K + + +F + + P Y L+ L + R S+ + +M GL
Sbjct: 362 MSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGL 421
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
+V +Y++++D LCK ++NA + +M+ +GI P++ T+ L G G +K
Sbjct: 422 LSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHG 481
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
V + LL+ G+ DV T++++IN LC+ +A +M + G P+ +TY I+I +
Sbjct: 482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 326 QEGDNDKAEKLLRQMIARGL 345
GD D++ KL +M GL
Sbjct: 542 STGDTDRSVKLFAKMKENGL 561
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 148/319 (46%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y ++ L + + + ++ + PD T+ +S L E + + V
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + P + +LV AL + E L M G V +Y++++D C +
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A M ++P++ +++ ++G V + +++ PDV+T+S +I
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ LC++ I DA++ EM G+ PN ITY+ L+ + C D ++ L KMK G+
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+Y Y + CK ++K A+E+ + +L G D TY+ +I L + G EA +
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 302 MSKMEDNGCTPDAVTYEII 320
S +E +GC PD+ T ++
Sbjct: 623 FSSIERHGCVPDSYTKRLV 641
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 147/365 (40%), Gaps = 75/365 (20%)
Query: 56 LLNQMVVKSINPDVYTFS-----ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 110
LL+ ++K I Y S +L+ + + G K +V A + G KP Y+++
Sbjct: 127 LLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAV 186
Query: 111 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 170
+D N ++ A F M PD +Y+I+I+G+CK +VD+A+ L KQM E
Sbjct: 187 IDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGN 246
Query: 171 TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT------------------- 211
P+V TY+ LIDG +GR+ +A + + M R L PN T
Sbjct: 247 RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFE 306
Query: 212 ----------------YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
Y ++L L N ++K+ +G +PD T+ + L
Sbjct: 307 VLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLL 366
Query: 256 KGGRLKDAQEVFQDLLIK----GYN-------------------------------LDVR 280
KG L + +F + + G+N V
Sbjct: 367 KGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVY 426
Query: 281 TYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+Y +I+ LCK + A +++M+D G +P+ VT+ + GD K +L ++
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 341 IARGL 345
+ G
Sbjct: 487 LVHGF 491
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 102/203 (50%)
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
++I ++ + ++F Q+ + P Y+++ID L KS + A+ +M S
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
G P+ TY+ L+ +CK VD AI L+K+M+ +G P+V+TYTIL+DG GR+ +A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
+ + + ++ N + T ++G+ + +A ++ + V Y+ ++Y
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 324 LFQEGDNDKAEKLLRQMIARGLL 346
L + + LR++ RG +
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYI 352
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
S L +AL + + ++ L+K+++ G +L+ + G K +VF +
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
G R Y +I+ L K D A +M +GC PD TY I+I+ + ++G D+
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 333 AEKLLRQMIARG 344
A +L++QM G
Sbjct: 234 AIRLVKQMEQEG 245
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 173/334 (51%), Gaps = 3/334 (0%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
++SLCK + + A L + + + PDV+TY TLI G+ + EA + +M I
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
PDV T++ L+ K + + M+ G PD+ +Y++LM Y + +A
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 126 IFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
I + + L P + +Y+I+++ LCK D+A+ LFK + + + P+++TY+ LI+GL
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGL 198
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
CKS R+ ++ E+ G PN +TY+++L K ++ + L KMK +G D
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKG-YNLDVRTYTIMINGLCKDGLFDEALALMS 303
+ ++ L K GR ++A E +L+ G + D+ +Y ++N KDG D L+
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
++E G PD T+ II+ L G+ AEK L
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 161/281 (57%), Gaps = 4/281 (1%)
Query: 67 PDVYT--FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
P + T +I V++LCK ++ A+ +L I+ G PDV+TY++L+ GY +++A
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+ M + PDV +Y+ +I+G K M++ L LF +M ++PD+ +Y++L+
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCY 128
Query: 185 CKSGRISDAWELVNE-MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
K GR +A+++++E +H GL P + TY+ LLDALCK+ H DNAI L K +K + + P+
Sbjct: 129 FKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPE 187
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
+ TY IL++GLCK R+ + ++L GY + TYT M+ K ++ L L
Sbjct: 188 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFL 247
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
KM+ G T D ++ AL + G ++A + + +++ G
Sbjct: 248 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 187/346 (54%), Gaps = 7/346 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I K+ ++N L+ EML +SPD+ +Y TL+S + +G+ EA +L++ +
Sbjct: 86 YNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDI 145
Query: 62 -VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + P + T++IL+DALCK G A + +K KP+++TY+ L++G C V
Sbjct: 146 HLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNILINGLCKSRRV 204
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ + + + P+ +Y+ M+ K K ++ L LF +M E T D ++
Sbjct: 205 GSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAV 264
Query: 181 IDGLCKSGRISDAWELVNEMHSRGL-PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+ L K+GR +A+E ++E+ G ++++Y++LL+ K+ ++D L+++++ +G
Sbjct: 265 VSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKG 324
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PD YT+TI+++GL G A++ + G V T +I+GLCK G D A+
Sbjct: 325 LKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM 384
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L + ME D TY +++ L ++G A KLL +G+
Sbjct: 385 RLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 180/342 (52%), Gaps = 8/342 (2%)
Query: 11 KDKLVNDAYNLYSEMLA-KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS---IN 66
K ++DA +L++ + A RI D+ + +++ + + + + V L Q ++KS
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLF-QHILKSQPNFR 119
Query: 67 PDVYTFSILVDALCK--EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
P TF IL+ C+ + + VL +M+ G +PD VT + C V++A+
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSLIDG 183
D+ +T PD +Y+ ++ LCK K + +M + ++ PD+V+++ LID
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
+C S + +A LV+++ + G P+ Y++++ C A+ + KKMK +G+ PD
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
TY L+ GL K GR+++A+ + ++ GY D TYT ++NG+C+ G AL+L+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ME GC P+ TY +++ L + DK +L M + G+
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 157/309 (50%), Gaps = 13/309 (4%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK-S 64
+ SLC+ V++A +L E+ K PD TY L+ C L +++M
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+ PD+ +F+IL+D +C ++EA +++ + G KPD Y+++M G+C +++ ++A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
++ M + PD +Y+ +I GL K V++A K M PD TY+SL++G+
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
C+ G A L+ EM +RG PN TY++LL LCK +D + L + MK G+ +
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMINGLCKDGLFDEALALMS 303
Y L+ L K G++ +A EVF D + +L D Y+ + + L +
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVF-DYAVDSKSLSDASAYSTL----------ETTLKWLK 454
Query: 304 KMEDNGCTP 312
K ++ G P
Sbjct: 455 KAKEQGLVP 463
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 156/310 (50%), Gaps = 1/310 (0%)
Query: 12 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYT 71
D +++ + + + M+ + PD VT + C G++ EA L+ ++ K PD YT
Sbjct: 137 DSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYT 196
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
++ L+ LCK + + M + KPD+V+++ L+D C + +A + + +
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
PD Y+ ++ G C + +A+ ++K+M E + PD +TY++LI GL K+GR+
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 191 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL 250
+A + M G P+ TY+SL++ +C+ A+SL+++M+ +G P+ TY L
Sbjct: 317 EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376
Query: 251 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 310
L GLCK + E+++ + G L+ Y ++ L K G EA + D+
Sbjct: 377 LHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKS 436
Query: 311 TPDAVTYEII 320
DA Y +
Sbjct: 437 LSDASAYSTL 446
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 169/333 (50%), Gaps = 5/333 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKR--ISPDVVTYTTLISGFCIV--GQLKEAVGL 56
+++++ S +VND L+ +L + P T+ L+S C + +
Sbjct: 87 FHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRV 146
Query: 57 LNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
LN MV + PD T I V +LC+ G+V EAK+++ + + PD TY+ L+ C
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK 206
Query: 117 VNEVNKAEDIFNTMTR-MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
+++ + + M ++ PD+ S++I+I+ +C K + +A+ L ++ PD
Sbjct: 207 CKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF 266
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
Y++++ G C + S+A + +M G+ P+ ITY++L+ L K V+ A +K M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
G PD TYT L++G+C+ G A + +++ +G + TY +++GLCK L
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
D+ + L M+ +G ++ Y ++ +L + G
Sbjct: 387 DKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 135/242 (55%), Gaps = 12/242 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +ID++C K + +A L S++ PD Y T++ GFC + + EAVG+ +M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + PD T++ L+ L K G+V+EA+ L M+ G +PD TY+SLM+G C E
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + M AP+ +Y+ +++GLCK +++D + L++ M + + + Y++L+
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 182 DGLCKSGRISDAWELVN-EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
L KSG++++A+E+ + + S+ L + YS+L + + +KK K QG+
Sbjct: 413 RSLVKSGKVAEAYEVFDYAVDSKSL-SDASAYSTL----------ETTLKWLKKAKEQGL 461
Query: 241 LP 242
+P
Sbjct: 462 VP 463
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 163/324 (50%), Gaps = 15/324 (4%)
Query: 1 MYSTIIDSLCKDK-LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+Y T+ SLC +K ++ A +L M + P+ Y LI +C V +++A
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+V K I PD++T++I+++ C+ + K+A + M + KPDVVTYS L++
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS------ 679
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ D+ M ++ PDV Y+IMIN C + + LFK M I PDVVTY+
Sbjct: 680 -DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTV 738
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ K R L EM + + P+V Y+ L+D CK + A + +M G
Sbjct: 739 LLKN--KPER-----NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESG 791
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PD YT L+ CK G LK+A+ +F ++ G DV YT +I G C++G +A+
Sbjct: 792 VDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAV 851
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYA 323
L+ +M + G P + + YA
Sbjct: 852 KLVKEMLEKGIKPTKASLSAVHYA 875
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 165/310 (53%), Gaps = 15/310 (4%)
Query: 37 YTTLISGFCIVGQ-LKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 95
Y TL + C + +A LL++M + P+ + L+ A C+ V++A+ ++
Sbjct: 567 YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL 626
Query: 96 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 155
+ PD+ TY+ +++ YC +NE +A +F M R ++ PDV +YS+++N
Sbjct: 627 VTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS------- 679
Query: 156 DDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
D L++ ++M ++ PDVV Y+ +I+ C + + L +M R + P+V+TY+ L
Sbjct: 680 DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Query: 216 LDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
L KN N L ++MK + PDV+ YT+L+D CK G L +A+ +F ++ G
Sbjct: 740 L----KNKPERN---LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGV 792
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEK 335
+ D YT +I CK G EA + +M ++G PD V Y +I + G KA K
Sbjct: 793 DPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVK 852
Query: 336 LLRQMIARGL 345
L+++M+ +G+
Sbjct: 853 LVKEMLEKGI 862
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 167/346 (48%), Gaps = 15/346 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ D+L K V +A L+ EM K I+PDV+ YTTLI G C+ G+ +A L+ +M
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD+ +++L L G +EA L +M G KP VT++ +++G E++
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KAE + ++ D M+ G C +D A F + E P V Y +L
Sbjct: 519 KAEAFYESLEHKSRENDAS----MVKGFCAAGCLDHAFERF--IRLEFPLPKSV-YFTLF 571
Query: 182 DGLC-KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
LC + IS A +L++ M G+ P Y L+ A C+ ++V A + + + I
Sbjct: 572 TSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKI 631
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+PD++TYTI+++ C+ K A +F+D+ + DV TY++++N D L
Sbjct: 632 VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELD 684
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ +ME PD V Y I+I D K L + M R ++
Sbjct: 685 MKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIV 730
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 173/349 (49%), Gaps = 10/349 (2%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV----VTYTTLISGFCIVGQLKEAVGL 56
Y I+ LC +++ + AY L + I D + Y ++ G C ++++A +
Sbjct: 254 FYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESV 313
Query: 57 LNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
+ M I+PDVY +S +++ K + +A +V M+K ++ + V SS++ YC
Sbjct: 314 VLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQ 373
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
+ ++A D+F ++ D Y++ + L K+ V++A+ LF++M + I PDV+
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y++LI G C G+ SDA++L+ EM G P+++ Y+ L L N A +K M+
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
++G+ P T+ ++++GL G L A+ ++ L K D M+ G C G D
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLD 549
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
A ++E P +V + + ++ KA+ LL +M G+
Sbjct: 550 HAFERFIRLEFP--LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGV 596
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 33/352 (9%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS II+ K+ + A +++++ML KR + V ++++ +C +G EA L +
Sbjct: 328 VYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEF 387
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+I+ D +++ DAL K GKV+EA + M G PDV+ Y++L+ G CL +
Sbjct: 388 RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A D+ M PD+ Y+++ GL + +A K M + P VT++ +
Sbjct: 448 SDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMV 507
Query: 181 IDGLCKSGRISDAWELVNEMHSRG------------------------------LPPNVI 210
I+GL +G + A + + LP +V
Sbjct: 508 IEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSV- 566
Query: 211 TYSSLLDALC-KNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
Y +L +LC + ++ A L+ +M G+ P+ Y L+ C+ ++ A+E F+
Sbjct: 567 -YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
L+ K D+ TYTIMIN C+ +A AL M+ PD VTY +++
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 39/349 (11%)
Query: 31 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKN 90
+PD+ LIS G+ VG ++ ++ D +T+ ++V AL + +E +
Sbjct: 179 APDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEK 238
Query: 91 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ----SYSIMI 146
+L+ ++ + V Y + ++G CL + A + + + D +Y ++
Sbjct: 239 LLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVV 298
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG----------------------- 183
GLC ++DA ++ M I PDV YS++I+G
Sbjct: 299 RGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKR 358
Query: 184 ------------LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
C+ G S+A++L E + + + Y+ DAL K V+ AI L
Sbjct: 359 INCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
++M +GI PDV YT L+ G C G+ DA ++ ++ G D+ Y ++ GL
Sbjct: 419 FREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLAT 478
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+GL EA + ME+ G P VT+ ++I L G+ DKAE +
Sbjct: 479 NGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 134/308 (43%), Gaps = 10/308 (3%)
Query: 43 GFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL-AVMIKGGEK 101
GF ++ LK A+G + Q +V I + LV A EA ++ G
Sbjct: 125 GFSVMDLLK-AIGEMEQSLVLLIR----VSTALVKAYANLDMFDEAIDIFFRAYYSLGRA 179
Query: 102 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 161
PD+ + L+ + F + R+ L D +Y +++ L + ++ L
Sbjct: 180 PDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKL 239
Query: 162 FKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV----ITYSSLLD 217
++ V Y + I+GLC + A+ L+ + + + I Y ++
Sbjct: 240 LSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVR 299
Query: 218 ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 277
LC +++A S++ M+ GI PDVY Y+ +++G K + A +VF +L K +
Sbjct: 300 GLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRI 359
Query: 278 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
+ + ++ C+ G F EA L + + + D V Y + AL + G ++A +L
Sbjct: 360 NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Query: 338 RQMIARGL 345
R+M +G+
Sbjct: 420 REMTGKGI 427
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ +I++ + + DA +M ++P TY TLI G+ I G+ + + LL+ M
Sbjct: 117 FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 61 VVKS---INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
+ + + P++ TF++LV A CK+ KV+EA V+ M + G +PD VTY+++ Y
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 118 NEVNKAE-DIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
E +AE ++ M E A P+ ++ I++ G C+ V D L ++M + ++V
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
++SLI+G + E++ M + +VITYS++++A +++ A + K+M
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
G+ PD + Y+IL G + K A+E+ + L+++ +V +T +I+G C +G
Sbjct: 357 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSM 415
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
D+A+ + +KM G +P+ T+E +++ + KAE++L+ M G+
Sbjct: 416 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 465
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 152/301 (50%), Gaps = 7/301 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG-LLNQM 60
++ ++ + CK K V +A+ + +M + PD VTY T+ + + G+ A ++ +M
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM 250
Query: 61 VVKS-INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
V+K P+ T I+V C+EG+V++ + M + + ++V ++SL++G+ V +
Sbjct: 251 VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ +++ M + DV +YS ++N ++ A +FK+M + PD YS
Sbjct: 311 RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSI 370
Query: 180 LIDGLCKSGRISDAWELVNEM--HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
L G ++ A EL+ + SR PNV+ +++++ C N +D+A+ + KM
Sbjct: 371 LAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 427
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
G+ P++ T+ L+ G + + A+EV Q + G + T+ ++ GL DE
Sbjct: 428 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 487
Query: 298 A 298
+
Sbjct: 488 S 488
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 138/277 (49%), Gaps = 5/277 (1%)
Query: 69 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 128
V + + L++ L + G+ EA+ V + + G +P +++Y++L+ + + I +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 129 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
+ + D ++ +IN + ++DA+ +M + P TY++LI G +G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 189 RISDAWELVNEMHSRG---LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
+ + EL++ M G + PN+ T++ L+ A CK V+ A ++KKM+ G+ PD
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 246 TY-TILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGLFDEALALMS 303
TY TI + KG ++ EV + +++K + RT I++ G C++G + L +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M++ + V + +I + D D +++L M
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
+ DV+TY+T+++ + G +++A + +MV + PD + +SIL + + K+A+
Sbjct: 326 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 385
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
+L +I +P+VV +++++ G+C ++ A +FN M + ++P+++++ ++ G
Sbjct: 386 ELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
++K A + + M + P+ T+ L + +G ++ + +N + +
Sbjct: 445 LEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK 498
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YST++++ + A ++ EM+ + PD Y+ L G+ + K+A LL ++
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V+S P+V F+ ++ C G + +A V M K G P++ T+ +LM GY V +
Sbjct: 393 VES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 451
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD---ALNLFK 163
KAE++ M + P+ ++ ++ + D+ A+N K
Sbjct: 452 KAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 159/309 (51%), Gaps = 1/309 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ ++ +V A + EM PD + L+ C G +K+A L M
Sbjct: 185 LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM 244
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
++ ++ F+ L+ C+ GK+ EAK VL M + G +PD+V Y++L+ GY ++
Sbjct: 245 RMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A D+ M R P+ Y+++I LCK+ +++A+ +F +M DVVTY++L
Sbjct: 304 ADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ G CK G+I + ++++M +GL P+ +TY ++ A K + + L++KM+
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEY 423
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD+ Y +++ CK G +K+A ++ ++ G + V T+ IMINGL G EA
Sbjct: 424 HPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASD 483
Query: 301 LMSKMEDNG 309
+M G
Sbjct: 484 HFKEMVTRG 492
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 175/349 (50%), Gaps = 6/349 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVT---YTTLISGFCIVGQLKEAVGLL 57
+Y +++ L K + + L EM ++ +P ++ + L+ F +K+A+ +L
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAIEVL 206
Query: 58 NQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
++M PD Y F L+DALCK G VK+A + M + ++ ++SL+ G+C V
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRV 265
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
++ +A+ + M PD+ Y+ +++G + DA +L + M P+ Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ LI LCK R+ +A ++ EM +V+TY++L+ CK +D ++ M
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
+G++P TY ++ K ++ E+ + + Y+ D+ Y ++I CK G E
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
A+ L ++ME+NG +P T+ I+I L +G +A ++M+ RGL
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 187/381 (49%), Gaps = 39/381 (10%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T++ +LCK+ V A +L SEM P+ VT+ LIS +C +L +++ LL +
Sbjct: 219 VYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKC 274
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
PDV T + +++ LC EG+V EA VL + G K DVV ++L+ GYC + ++
Sbjct: 275 FSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKM 334
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A+ F M R P+V++Y+++I G C + M+D AL+ F M T+ I + T+++L
Sbjct: 335 RVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTL 394
Query: 181 IDGLCKSGRISDAWELVNEMH-------SRGLPPNVITY--------------------- 212
I GL GR D +++ M +R P N + Y
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKL 454
Query: 213 -------SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
S L +LC+ +D+ + +M +G +P + L+ + G+++++ E
Sbjct: 455 FPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLE 514
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
+ D++ +GY T+ +I G CK + + M + GC PD +Y ++ L
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Query: 326 QEGDNDKAEKLLRQMIARGLL 346
+GD KA L +M+ + ++
Sbjct: 575 VKGDIQKAWLLFSRMVEKSIV 595
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 159/340 (46%), Gaps = 5/340 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEML-AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y + LC + + Y L EM + + PD + T+I GF +K + +++ +
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I P + F+ ++D L KE + M+ G DV TY LM G L N +
Sbjct: 139 SKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ M +AP+ Y+ +++ LCK V A +L +M P+ VT++ L
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNIL 254
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I C ++ + L+ + S G P+V+T + +++ LC V A+ ++++++ +G
Sbjct: 255 ISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
DV L+ G C G+++ AQ F ++ KGY +V TY ++I G C G+ D AL
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+ M+ + + T+ +I L G D K+L M
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 171/348 (49%), Gaps = 12/348 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++++I+D L K+ + +M+A I DV TY L+ G + ++ + LL M
Sbjct: 149 VFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIM 208
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P+ ++ L+ ALCK GKV A+++++ M ++P+ VT++ L+ YC ++
Sbjct: 209 KTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM----KEPNDVTFNILISAYCNEQKL 264
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++ + + PDV + + ++ LC V +AL + +++ ++ DVV ++L
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ G C G++ A EM +G PNV TY+ L+ C +D+A+ MK I
Sbjct: 325 VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAI 384
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDL----LIKGYNLDVRTYTIMINGLCKDGLFD 296
+ T+ L+ GL GGR D ++ + + + G +D Y +I G K+ ++
Sbjct: 385 RWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWE 442
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+AL + KME P AV + +L ++G D + QMI G
Sbjct: 443 DALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 11/302 (3%)
Query: 51 KEAVGLLNQMVVKSINPDVY----TFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVV 105
K A G L S P T+ L LC + +L M G PD
Sbjct: 54 KSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDA 113
Query: 106 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF-KQ 164
+ +++ G+ + + + + +++ + P ++ ++ +++ L K + +D A F ++
Sbjct: 114 IFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRK 172
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
M I DV TY L+ GL + RI D ++L+ M + G+ PN + Y++LL ALCKN
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
V A SL+ +MK P+ T+ IL+ C +L + + + G+ DV T T
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
++ LC +G EAL ++ ++E G D V ++ G A++ +M +G
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 345 LL 346
L
Sbjct: 349 YL 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 45/289 (15%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+T++ C + A + EM K P+V TY LI+G+C VG L A+ N M
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY-CLVN--- 118
+I + TF+ L+ L G+ + +L +M + D V + + +D Y C++
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM----QDSDTV-HGARIDPYNCVIYGFY 436
Query: 119 EVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV-- 175
+ N+ ED + +ME L P S + LC+ +DD + QM E P ++
Sbjct: 437 KENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVS 496
Query: 176 ---------------------------------TYSSLIDGLCKSGRISDAWELVNEMHS 202
T++++I G CK ++ + + V +M
Sbjct: 497 HCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE 556
Query: 203 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
RG P+ +Y+ LL+ LC + A L +M + I+PD ++ L+
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I K+ DA +M +++ P V + + C G + + +QM+
Sbjct: 428 YNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI 485
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P + L+ + GK++E+ ++ M+ G P T+++++ G+C ++V
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
M PD +SY+ ++ LC + A LF +M ++I PD +SSL+
Sbjct: 546 NGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 174/346 (50%), Gaps = 3/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL--KEAVGLLNQ 59
Y+ +I++ ++ + L M ++ISP ++TY T+I+ C G L + +GL +
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAE 237
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M + I PD+ T++ L+ A G EA+ V M GG PD+ TYS L++ + +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ K D+ M PD+ SY++++ K + +A+ +F QM TP+ TYS
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L++ +SGR D +L EM S P+ TY+ L++ + + ++L M +
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
I PD+ TY ++ KGG +DA+++ Q + + YT +I + L++EAL
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ M + G P T+ ++Y+ + G ++E +L +++ G+
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 174/327 (53%), Gaps = 1/327 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I L ++ L++ ++ EM ++ +S V +YT LI+ + G+ + ++ LL++M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEA-KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+ I+P + T++ +++A + G E + A M G +PD+VTY++L+ +
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
++AE +F TM + PD+ +YS ++ K++ ++ +L +M + PD+ +Y+
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L++ KSG I +A + ++M + G PN TYS LL+ ++ D+ L +MK
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
PD TY IL++ +GG K+ +F D++ + D+ TY +I K GL ++A
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQ 326
++ M N P + Y +I A Q
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQ 469
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 167/335 (49%), Gaps = 1/335 (0%)
Query: 2 YSTIIDSLCKDKLVNDAY-NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+T+I++ + L + L++EM + I PD+VTY TL+S I G EA + M
Sbjct: 214 YNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I PD+ T+S LV+ K ++++ ++L M GG PD+ +Y+ L++ Y +
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A +F+ M P+ +YS+++N + DD LF +M + N PD TY+ L
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+ + G + L ++M + P++ TY ++ A K ++A +++ M I
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDI 453
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+P YT +++ + ++A F + G N + T+ ++ + GL E+ A
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEA 513
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEK 335
++S++ D+G + T+ I A Q G ++A K
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVK 548
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 160/341 (46%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS ++++ K + + +L EM + PD+ +Y L+ + G +KEA+G+ +QM
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+ T+S+L++ + G+ + + + M PD TY+ L++ +
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ +F+ M + PD+++Y +I K + +DA + + M +I P Y+ +I
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ ++ +A N MH G P++ T+ SLL + + V + +++ ++ GI
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ T+ ++ +GG+ ++A + + D+ + D RT +++ L DE
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
+M+ + P + Y +++ + D +LL +M++
Sbjct: 585 FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLS 625
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 101 KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN 160
KP+ Y+ ++ ++K ++F+ M ++ V SY+ +IN + + +L
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 161 LFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE----LVNEMHSRGLPPNVITYSSLL 216
L +M E I+P ++TY+++I+ + G WE L EM G+ P+++TY++LL
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGL---DWEGLLGLFAEMRHEGIQPDIVTYNTLL 254
Query: 217 DALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 276
A D A + + M GI+PD+ TY+ L++ K RL+ ++ ++ G
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
D+ +Y +++ K G EA+ + +M+ GCTP+A TY +++ Q G D +L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 337 LRQM 340
+M
Sbjct: 375 FLEM 378
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 152/346 (43%), Gaps = 1/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +++ + +D L+ EM + PD TY LI F G KE V L + MV
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++I PD+ T+ ++ A K G ++A+ +L M P Y+ +++ +
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYE 474
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A FNTM + P ++++ ++ + +V ++ + ++ I + T+++ I
Sbjct: 475 EALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQI 534
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ + G+ +A + +M P+ T ++L VD ++MK IL
Sbjct: 535 EAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDIL 594
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING-LCKDGLFDEALA 300
P + Y ++L K R D E+ +++L + + MI G D +
Sbjct: 595 PSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEY 654
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ K+ GC Y ++ AL+ G ++A ++L + RGL
Sbjct: 655 VLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLF 700
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I++ + L +A ++ M +P + T+ +L+ F G +KE+ +L+++V
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I + TF+ ++A + GK +EA M K PD T +++ Y V+
Sbjct: 520 DSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVD 579
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + F M ++ P + Y +M+ K + DD L ++M ++ V +I
Sbjct: 580 ECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM----LSNRVSNIHQVI 635
Query: 182 DGLCKSGRISDA-WELV----NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
+ K D+ W++V ++++S G + Y++LLDAL + A ++ +
Sbjct: 636 GQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEAT 695
Query: 237 HQGILPDVY-----TYTILLDGLCKGGRLKDAQEVF----QDLLIKG 274
+G+ P+++ +++ + + +GG + A V+ D+L+KG
Sbjct: 696 KRGLFPELFRKNKLVWSVDVHRMSEGG-MYTALSVWLNDINDMLLKG 741
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 174/341 (51%), Gaps = 3/341 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG-QLKEAVGLLNQM 60
Y+++I + +A N++ +M P ++TY +++ F +G + L+ +M
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 61 VVKSINPDVYTFSILVDALCKEGKV-KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
I PD YT++ L+ CK G + +EA V M G D VTY++L+D Y +
Sbjct: 271 KSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+A + N M +P + +Y+ +I+ + M+D+A+ L QM + PDV TY++
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ G ++G++ A + EM + G PN+ T+++ + + + ++ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PD+ T+ LL + G + VF+++ G+ + T+ +I+ + G F++A+
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+ +M D G TPD TY ++ AL + G +++EK+L +M
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 168/309 (54%), Gaps = 2/309 (0%)
Query: 16 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL-KEAVGLLNQMVVKSINPDVYTFSI 74
N +L +M + I+PD TY TLI+ C G L +EA + +M + D T++
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L+D K + KEA VL M+ G P +VTY+SL+ Y +++A ++ N M
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
PDV +Y+ +++G + V+ A+++F++M P++ T+++ I G+ ++
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
++ +E++ GL P+++T+++LL +N + K+MK G +P+ T+ L+
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
+ G + A V++ +L G D+ TY ++ L + G+++++ ++++MED C P+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 315 VTYEIIIYA 323
+TY +++A
Sbjct: 560 LTYCSLLHA 568
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 177/344 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I + +D ++++A L ++M K PDV TYTTL+SGF G+++ A+ + +M
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P++ TF+ + GK E + + G PD+VT+++L+ + +
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ +F M R P+ ++++ +I+ + + A+ ++++M +TPD+ TY++++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
L + G + +++ EM PN +TY SLL A + SL +++ I
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P L+ K L +A+ F +L +G++ D+ T M++ + + +A +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ M++ G TP TY ++Y + D K+E++LR+++A+G+
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 158/300 (52%), Gaps = 1/300 (0%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 107
G++ A + N + + DVY+++ L+ A G+ +EA NV M + G KP ++TY
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 108 SSLMDGYC-LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
+ +++ + + NK + M +APD +Y+ +I + + +A +F++M
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
+ D VTY++L+D KS R +A +++NEM G P+++TY+SL+ A ++ +D
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 227 NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
A+ L +M +G PDV+TYT LL G + G+++ A +F+++ G ++ T+ I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G F E + + ++ G +PD VT+ ++ Q G + + + ++M G +
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 162/320 (50%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T++ ++ + ++ ++ EM P+ T+ TLIS + G ++A+ + +M+
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD+ T++ ++ AL + G ++++ VLA M G KP+ +TY SL+ Y E+
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + + P ++ K ++ +A F ++ +PD+ T +S++
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ ++ A +++ M RG P++ TY+SL+ ++ + +++++ +GI
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD+ +Y ++ C+ R++DA +F ++ G DV TY I D +F+EA+ +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 302 MSKMEDNGCTPDAVTYEIII 321
+ M +GC P+ TY I+
Sbjct: 757 VRYMIKHGCRPNQNTYNSIV 776
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 113/204 (55%), Gaps = 3/204 (1%)
Query: 143 SIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHS 202
+I+I+ L K V A N+F + + + DV +Y+SLI SGR +A + +M
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 203 RGLPPNVITYSSLLDALCKNHHVDNAI-SLIKKMKHQGILPDVYTYTILLDGLCKGGRL- 260
G P +ITY+ +L+ K N I SL++KMK GI PD YTY L+ CK G L
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLH 295
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
++A +VF+++ G++ D TY +++ K EA+ ++++M NG +P VTY +
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 321 IYALFQEGDNDKAEKLLRQMIARG 344
I A ++G D+A +L QM +G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKG 379
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 112/236 (47%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +++ + K + ++L E+ + I P V TL+ L EA +++
Sbjct: 562 YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ +PD+ T + +V + V +A VL M + G P + TY+SLM + +
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
K+E+I + + PD+ SY+ +I C+ + DA +F +M I PDV+TY++ I
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+A +V M G PN TY+S++D CK + D A ++ +++
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 2/196 (1%)
Query: 14 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFS 73
L+ +A +SE+ + SPD+ T +++S + + +A G+L+ M + P + T++
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 74 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 133
L+ + +++ +L ++ G KPD+++Y++++ YC + A IF+ M
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 134 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDA 193
+ PDV +Y+ I M ++A+ + + M P+ TY+S++DG CK R +A
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Query: 194 WELVNEMHSRGLPPNV 209
V ++ R L P+
Sbjct: 789 KLFVEDL--RNLDPHA 802
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
+K+ +Q +L D I++ L K GR+ A +F L G++LDV +YT +I+
Sbjct: 161 FMKQKDYQSML-DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN-DKAEKLLRQMIARGL 345
G + EA+ + KME++GC P +TY +I+ + G +K L+ +M + G+
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 177/319 (55%), Gaps = 3/319 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ L K K+V+ A ++S M+ P+ TY+ L++ GQL G++ ++
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EIS 366
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + +Y++ LV L K G V EA + M K + +Y S+++ C +
Sbjct: 367 KRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++ + + + D Y+ + + L K+K + +LF++M + +PD+ TY+ LI
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ G + +A + E+ P++I+Y+SL++ L KN VD A K+M+ +G+
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV TY+ L++ K R++ A +F+++L+KG ++ TY I+++ L K+G EA+ L
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Query: 302 MSKMEDNGCTPDAVTYEII 320
SKM+ G TPD++TY ++
Sbjct: 605 YSKMKQQGLTPDSITYTVL 623
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 145/250 (58%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS ++ +L K V++A+ L+ +M + + + +Y +++ C G+ EA+ +L+++
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + D ++ + AL K ++ ++ M K G PD+ TY+ L+ + V EV
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A +IF + R + PD+ SY+ +IN L K VD+A FK+M + + PDVVTYS+L
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++ K+ R+ A+ L EM +G PN++TY+ LLD L KN A+ L KMK QG+
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGL 613
Query: 241 LPDVYTYTIL 250
PD TYT+L
Sbjct: 614 TPDSITYTVL 623
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 182/376 (48%), Gaps = 35/376 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++D+L KD+ A ++ +M + D TYT +I +G+ EAVGL N+M+
Sbjct: 241 YNMLLDALAKDE---KACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI 297
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM---------- 111
+ + +V ++ L+ L K V +A V + M++ G +P+ TYS L+
Sbjct: 298 TEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV 357
Query: 112 --DGYCLVNE--------------------VNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
DG +++ V++A +F M + + SY M+ L
Sbjct: 358 RLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
C +A+ + ++H + + D + Y+++ L K +IS +L +M G P++
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
TY+ L+ + + VD AI++ ++++ PD+ +Y L++ L K G + +A F++
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+ KG N DV TY+ ++ K + A +L +M GC P+ VTY I++ L + G
Sbjct: 538 MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGR 597
Query: 330 NDKAEKLLRQMIARGL 345
+A L +M +GL
Sbjct: 598 TAEAVDLYSKMKQQGL 613
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 141/302 (46%), Gaps = 38/302 (12%)
Query: 55 GLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 114
+L+ MV +++ ++ T +IL+ G ++ + L ++ K K + TY L+ Y
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGFF---GNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAY 213
Query: 115 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
+ +KA D++ + R D+ +Y+++++ L K + A +F+ M + D
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDE 270
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
TY+ +I + + G+ +A L NEM + GL NV+ Y++L+ L K VD AI + +
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 235 MKHQGILPDVYTYTILLDGLCKGG---RLKDAQEVFQDLLIKG-YNLDVRT--------- 281
M G P+ YTY++LL+ L G RL E+ + + +G Y+ VRT
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSE 390
Query: 282 -------------------YTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIY 322
Y M+ LC G EA+ ++SK+ + G D + Y +
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 323 AL 324
AL
Sbjct: 451 AL 452
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 159/294 (54%), Gaps = 2/294 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS-PDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+++ ++ CK+ +N A+ + EM IS P+ +TY+TL+ + KEAV L
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 60 MVVKS-INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
M+ K I+PD TF+++++ C+ G+V+ AK +L M K G P+V YS+LM+G+C V
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
++ +A+ F+ + + L D Y+ ++N C+ D+A+ L +M D +TY+
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
++ GL GR +A +++++ S G+ N +Y +L+ALC N ++ A+ + M +
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
GI P T+ L+ LC+ G + V L G +++ ++ +CK+
Sbjct: 438 GIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 152/284 (53%), Gaps = 2/284 (0%)
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG-EKPDVVTYSSLMDGYCLVNEVNKA 123
+ P+ F+ILV CK G + A V+ M + G P+ +TYS+LMD + +A
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 124 EDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
++F M E ++PD ++++MING C+ V+ A + M P+V YS+L++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G CK G+I +A + +E+ GL + + Y++L++ C+N D A+ L+ +MK
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D TY ++L GL GR ++A ++ +G +L+ +Y I++N LC +G ++A+ +
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
S M + G P T+ ++ L + G + ++L + GL+
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLI 475
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 148/271 (54%), Gaps = 1/271 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
YST++D L +A L+ +M++K ISPD VT+ +I+GFC G+++ A +L+ M
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFM 294
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
NP+VY +S L++ CK GK++EAK + K G K D V Y++LM+ +C E
Sbjct: 295 KKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET 354
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A + M D +Y++++ GL ++AL + Q +E + + +Y +
Sbjct: 355 DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++ LC +G + A + ++ M RG+ P+ T++ L+ LC++ + + + ++ G+
Sbjct: 415 LNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGL 474
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
+P ++ +++ +CK +L E+ L+
Sbjct: 475 IPGPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 151/300 (50%), Gaps = 2/300 (0%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSIN-PDVYTFSILVDALCKEGKVKEA 88
+ P+ + L+ C G + A ++ +M I+ P+ T+S L+D L + KEA
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 89 KNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
+ MI K G PD VT++ +++G+C EV +A+ I + M + P+V +YS ++N
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
G CK+ + +A F ++ + D V Y++L++ C++G +A +L+ EM +
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+ +TY+ +L L + A+ ++ + +G+ + +Y I+L+ LC G L+ A +
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
+ +G T+ ++ LC+ G + + ++ G P ++ ++ ++ +E
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 8/270 (2%)
Query: 84 KVKEAKNVLAVMIKGGEKPDV----VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 139
+ ++ + VL + K ++ TYS L+D + + I + M
Sbjct: 65 RERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQE 124
Query: 140 QSYSIMINGLCKIKMVDDALNLFKQMHT-ENITPDVVTYSSLIDGLCKSGRISDAWELV- 197
+ ++ + + D + +F + + P + S+ ++ L SG ++ + +L+
Sbjct: 125 SLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLL 184
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI-LPDVYTYTILLDGLCK 256
H+ GL PN ++ L+ CKN ++ A ++++MK GI P+ TY+ L+D L
Sbjct: 185 YAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFA 244
Query: 257 GGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
R K+A E+F+D++ K G + D T+ +MING C+ G + A ++ M+ NGC P+
Sbjct: 245 HSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVY 304
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
Y ++ + G +A++ ++ GL
Sbjct: 305 NYSALMNGFCKVGKIQEAKQTFDEVKKTGL 334
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 134/251 (53%), Gaps = 5/251 (1%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 129
T S ++ L K GK +A + M K G K D + +SLMD N + A ++F
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
+ + PD ++++I+I+G CK + DDA + M TPDVVTY+S ++ CK G
Sbjct: 265 LFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 190 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTI 249
E++ EM G PNV+TY+ ++ +L K+ V A+ + +KMK G +PD Y+
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 250 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED-- 307
L+ L K GR KDA E+F+D+ +G DV Y MI+ + AL L+ +MED
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 308 -NGCTPDAVTY 317
C+P+ TY
Sbjct: 444 GESCSPNVETY 454
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 163/323 (50%), Gaps = 5/323 (1%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
S ++ L K N A + + EM + D + +L+ ++ A + ++
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+I PD TF+IL+ CK K +A+ ++ +M PDVVTY+S ++ YC +
Sbjct: 267 -DTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ ++ M P+V +Y+I+++ L K K V +AL ++++M + PD YSSLI
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH---Q 238
L K+GR DA E+ +M ++G+ +V+ Y++++ A + + A+ L+K+M+ +
Sbjct: 386 HILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
P+V TY LL C ++K + ++ ++DV TY ++I GLC G +EA
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 299 LALMSKMEDNGCTPDAVTYEIII 321
+ G P T ++++
Sbjct: 506 CLFFEEAVRKGMVPRDSTCKMLV 528
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 126/255 (49%), Gaps = 28/255 (10%)
Query: 106 TYSSLMD--GYC--------LVNEVNKAED----IFNTMTRMELAPDVQSYSIMINGLCK 151
TY++++D G C LVNE+NK E+ +TM+++ + L K
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKV------------MRRLAK 215
Query: 152 IKMVDDALNLFKQMHTE-NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
+ A++ F +M + D + +SL+D L K I A E+ ++ + P+
Sbjct: 216 SGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDAR 274
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
T++ L+ CK D+A +++ MK PDV TYT ++ CK G + E+ +++
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
G N +V TYTI+++ L K EAL + KM+++GC PDA Y +I+ L + G
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 331 DKAEKLLRQMIARGL 345
A ++ M +G+
Sbjct: 395 KDAAEIFEDMTNQGV 409
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 3/258 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I CK + +DA + M +PDVVTYT+ + +C G + +L +M
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
NP+V T++I++ +L K +V EA V M + G PD YSSL+
Sbjct: 336 ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFK 395
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT---ENITPDVVTYS 178
A +IF MT + DV Y+ MI+ + AL L K+M E+ +P+V TY+
Sbjct: 396 DAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYA 455
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
L+ C ++ L++ M + +V TY L+ LC + V+ A ++ +
Sbjct: 456 PLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRK 515
Query: 239 GILPDVYTYTILLDGLCK 256
G++P T +L+D L K
Sbjct: 516 GMVPRDSTCKMLVDELEK 533
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 2/347 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I + V+ A L+ EM PD TY LI+ GQ + A+ L++ M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ +I P T++ L++A G +EA V M G PD+VT++ ++ Y +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI--TPDVVTYS 178
+KA F M ++ PD +++I+I L K+ AL+LF M + PDVVT++
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
S++ G I + + M + GL PN+++Y++L+ A + A+S++ +K
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
GI+PDV +YT LL+ + + A+EVF + + +V TY +I+ +G EA
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ + +ME +G P+ V+ ++ A + + +L +RG+
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 179/346 (51%), Gaps = 2/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRIS--PDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
++ II L K + A +L++ M KR PDVVT+T+++ + + G+++ +
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
MV + + P++ +++ L+ A G A +VL + + G PDVV+Y+ L++ Y +
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
KA+++F M + P+V +Y+ +I+ + +A+ +F+QM + I P+VV+ +
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ +S + + +++ SRG+ N Y+S + + ++ AI+L + M+ +
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ D T+TIL+ G C+ + +A +++ L Y+ ++ K G EA
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ ++M+ GC PD + Y +++A KA +L +M A G+
Sbjct: 586 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 148/309 (47%)
Query: 21 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALC 80
++ M+A+ + P++V+Y L+ + + G A+ +L + I PDV +++ L+++
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 81 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 140
+ + +AK V +M K KP+VVTY++L+D Y + +A +IF M + + P+V
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
S ++ + K + + + I + Y+S I + + A L M
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
+ + + +T++ L+ C+ AIS +K+M+ I Y+ +L K G++
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 581
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+A+ +F + + G DV YT M++ + +A L +ME NG PD++ +
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 321 IYALFQEGD 329
+ A + G
Sbjct: 642 MRAFNKGGQ 650
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 127/258 (49%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++S + + A ++ M +R P+VVTY LI + G L EAV + QM
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I P+V + L+ A + K VL+ G + Y+S + Y E+
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA ++ +M + ++ D +++I+I+G C++ +A++ K+M +I YSS++
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
K G++++A + N+M G P+VI Y+S+L A + A L +M+ GI
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Query: 242 PDVYTYTILLDGLCKGGR 259
PD + L+ KGG+
Sbjct: 633 PDSIACSALMRAFNKGGQ 650
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM-IKGGEKPDVVTY 107
+ +E G+LN V + + F +L+ L + G ++ NV M I+ Y
Sbjct: 90 RWEEVDGVLNSWVGRFARKN---FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIY 146
Query: 108 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+ ++ + N V++A +F M + PD ++Y +IN + A+NL M
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
I P TY++LI+ SG +A E+ +M G+ P+++T++ +L A
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIM 285
A+S + MK + PD T+ I++ L K G+ A ++F + K DV T+T +
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ G + A+ M G P+ V+Y ++ A G + A +L + G+
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 346 L 346
+
Sbjct: 387 I 387
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 99/222 (44%), Gaps = 10/222 (4%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS+++ + K V +A +++++M PDV+ YT+++ + + +A L +M
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I PD S L+ A K G + NV +M EK T + + + N +
Sbjct: 627 EANGIEPDSIACSALMRAFNKGG---QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTL 683
Query: 121 NKAEDIFNTMTRMELAPDVQSYSI-----MINGLCKIKMVDDALNLFKQMHTENITPDVV 175
+ + + + M+ P + S SI M++ K V+ + LF ++ + ++
Sbjct: 684 QEWKRAIDLIQMMD--PYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 741
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
TY+ L++ L G E++ M G+ P+ Y ++
Sbjct: 742 TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 2/347 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I + V+ A L+ EM PD TY LI+ GQ + A+ L++ M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ +I P T++ L++A G +EA V M G PD+VT++ ++ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI--TPDVVTYS 178
+KA F M ++ PD +++I+I L K+ AL+LF M + PDVVT++
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
S++ G I + + M + GL PN+++Y++L+ A + A+S++ +K
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
GI+PDV +YT LL+ + + A+EVF + + +V TY +I+ +G EA
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ + +ME +G P+ V+ ++ A + + +L +RG+
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 179/346 (51%), Gaps = 2/346 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRIS--PDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
++ II L K + A +L++ M KR PDVVT+T+++ + + G+++ +
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
MV + + P++ +++ L+ A G A +VL + + G PDVV+Y+ L++ Y +
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
KA+++F M + P+V +Y+ +I+ + +A+ +F+QM + I P+VV+ +
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ +S + + +++ SRG+ N Y+S + + ++ AI+L + M+ +
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ D T+TIL+ G C+ + +A +++ L Y+ ++ K G EA
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ ++M+ GC PD + Y +++A KA +L +M A G+
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 148/309 (47%)
Query: 21 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALC 80
++ M+A+ + P++V+Y L+ + + G A+ +L + I PDV +++ L+++
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 81 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 140
+ + +AK V +M K KP+VVTY++L+D Y + +A +IF M + + P+V
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
S ++ + K + + + I + Y+S I + + A L M
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
+ + + +T++ L+ C+ AIS +K+M+ I Y+ +L K G++
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 449
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+A+ +F + + G DV YT M++ + +A L +ME NG PD++ +
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 321 IYALFQEGD 329
+ A + G
Sbjct: 510 MRAFNKGGQ 518
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 127/258 (49%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++S + + A ++ M +R P+VVTY LI + G L EAV + QM
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I P+V + L+ A + K VL+ G + Y+S + Y E+
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA ++ +M + ++ D +++I+I+G C++ +A++ K+M +I YSS++
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
K G++++A + N+M G P+VI Y+S+L A + A L +M+ GI
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 500
Query: 242 PDVYTYTILLDGLCKGGR 259
PD + L+ KGG+
Sbjct: 501 PDSIACSALMRAFNKGGQ 518
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
N V++A +F M + PD ++Y +IN + A+NL M I P TY
Sbjct: 25 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY 84
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
++LI+ SG +A E+ +M G+ P+++T++ +L A A+S + MK
Sbjct: 85 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 144
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMINGLCKDGLF 295
+ PD T+ I++ L K G+ A ++F + K DV T+T +++ G
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ A+ M G P+ V+Y ++ A G + A +L + G++
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 255
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 99/222 (44%), Gaps = 10/222 (4%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS+++ + K V +A +++++M PDV+ YT+++ + + +A L +M
Sbjct: 435 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 494
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I PD S L+ A K G + NV +M EK T + + + N +
Sbjct: 495 EANGIEPDSIACSALMRAFNKGG---QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTL 551
Query: 121 NKAEDIFNTMTRMELAPDVQSYSI-----MINGLCKIKMVDDALNLFKQMHTENITPDVV 175
+ + + + M+ P + S SI M++ K V+ + LF ++ + ++
Sbjct: 552 QEWKRAIDLIQMMD--PYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 609
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
TY+ L++ L G E++ M G+ P+ Y ++
Sbjct: 610 TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 192/375 (51%), Gaps = 31/375 (8%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ +I++ + + DA +M ++P TY TLI G+ I G+ + + LL+ M
Sbjct: 117 FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 61 VVKS---INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
+ + + P++ TF++LV A CK+ KV+EA V+ M + G +PD VTY+++ Y
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 118 NEVNKAE-DIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
E +AE ++ M E A P+ ++ I++ G C+ V D L ++M + ++V
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 176 TYSSLIDGLC----KSG-----------RISDAWELVNE----------MHSRGLPPNVI 210
++SLI+G + G ++ ELV M + +VI
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVI 356
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
TYS++++A +++ A + K+M G+ PD + Y+IL G + K A+E+ + L
Sbjct: 357 TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL 416
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
+++ +V +T +I+G C +G D+A+ + +KM G +P+ T+E +++ +
Sbjct: 417 IVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 475
Query: 331 DKAEKLLRQMIARGL 345
KAE++L+ M G+
Sbjct: 476 WKAEEVLQMMRGCGV 490
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 154/326 (47%), Gaps = 32/326 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG-LLNQM 60
++ ++ + CK K V +A+ + +M + PD VTY T+ + + G+ A ++ +M
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM 250
Query: 61 VVKS-INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
V+K P+ T I+V C+EG+V++ + M + + ++V ++SL++G+ V +
Sbjct: 251 VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Query: 120 VNKAEDI--------FNT-----------------MTRMELAPDVQSYSIMINGLCKIKM 154
+ +++ FN M + DV +YS ++N
Sbjct: 311 RDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGY 370
Query: 155 VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM--HSRGLPPNVITY 212
++ A +FK+M + PD YS L G ++ A EL+ + SR PNV+ +
Sbjct: 371 MEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIF 427
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
++++ C N +D+A+ + KM G+ P++ T+ L+ G + + A+EV Q +
Sbjct: 428 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRG 487
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEA 298
G + T+ ++ GL DE+
Sbjct: 488 CGVKPENSTFLLLAEAWRVAGLTDES 513
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 133/268 (49%), Gaps = 5/268 (1%)
Query: 69 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 128
V + + L++ L + G+ EA+ V + + G +P +++Y++L+ + + I +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 129 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
+ + D ++ +IN + ++DA+ +M + P TY++LI G +G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 189 RISDAWELVNEMHSRG---LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
+ + EL++ M G + PN+ T++ L+ A CK V+ A ++KKM+ G+ PD
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 246 TY-TILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGLFDEALALMS 303
TY TI + KG ++ EV + +++K + RT I++ G C++G + L +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 304 KMEDNGCTPDAVTYEIIIYALFQEGDND 331
+M++ + V + +I + D D
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRD 312
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 129/273 (47%), Gaps = 19/273 (6%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++ C++ V D M R+ ++V + +LI+GF ++ + G+
Sbjct: 266 VVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV---EVMDRDGI-------- 314
Query: 65 INPDVYTFSILVDALCKE----GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
D T ++L+ + +E G K VL +M + K DV+TYS++M+ + +
Sbjct: 315 ---DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYM 371
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA +F M + + PD +YSI+ G + K A L + + E+ P+VV ++++
Sbjct: 372 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTV 430
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G C +G + DA + N+M G+ PN+ T+ +L+ + A +++ M+ G+
Sbjct: 431 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 490
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
P+ T+ +L + G ++ + L K
Sbjct: 491 KPENSTFLLLAEAWRVAGLTDESNKAINALKCK 523
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 107/200 (53%), Gaps = 5/200 (2%)
Query: 139 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN 198
V+S + ++N L + +A +FK + P +++Y++L+ + + +V+
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
E+ G + I ++++++A ++ ++++A+ + KMK G+ P TY L+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 259 RLKDAQEVFQDLLIKGYNLDV----RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
+ + + E+ DL+++ N+DV RT+ +++ CK +EA ++ KME+ G PD
Sbjct: 165 KPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 315 VTYEIIIYALFQEGDNDKAE 334
VTY I Q+G+ +AE
Sbjct: 224 VTYNTIATCYVQKGETVRAE 243
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YST++++ + A ++ EM+ + PD Y+ L G+ + K+A LL ++
Sbjct: 358 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V+S P+V F+ ++ C G + +A V M K G P++ T+ +LM GY V +
Sbjct: 418 VES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPW 476
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD---ALNLFK 163
KAE++ M + P+ ++ ++ + D+ A+N K
Sbjct: 477 KAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 4/344 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I+SL K K ++L +M AK++ T+ + + ++KEA+G ++M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ F+ ++D L K V +A+ V M K +PD+ +Y+ L++G+ +
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ +++ M PDV +Y I+IN CK K ++A+ F +M N P + SLI
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+GL +++DA E S G P TY++L+ A C + +++A + +M+ +G+
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ TY I+L L + R K+A EV+Q + + V TY IM+ C D A+ +
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYEVYQTMSCEP---TVSTYEIMVRMFCNKERLDMAIKI 426
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M+ G P + +I AL E D+A + +M+ G+
Sbjct: 427 WDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 16/316 (5%)
Query: 37 YTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 96
Y LI + Q K L++ M K + TF+++ + KVKEA M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSK-ETFALISRRYARARKVKEAIGAFHKME 189
Query: 97 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 156
+ G K + ++ ++D V A+ +F+ M + PD++SY+I++ G +
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ----- 244
Query: 157 DALNLFK------QMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
LNL + +M E PDVV Y +I+ CK+ + +A NEM R P+
Sbjct: 245 -ELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPH 303
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
+ SL++ L +++A+ ++ K G + TY L+ C R++DA + ++
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM 363
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
+KG + RTY I+++ L + EA + M C P TYEI++ +
Sbjct: 364 RLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERL 420
Query: 331 DKAEKLLRQMIARGLL 346
D A K+ +M +G+L
Sbjct: 421 DMAIKIWDEMKGKGVL 436
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 3/234 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y II++ CK K +A ++EM + P + +LI+G +L +A+ +
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ T++ LV A C ++++A + M G P+ TY ++ +
Sbjct: 330 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSK 389
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +++ TM+ P V +Y IM+ C + +D A+ ++ +M + + P + +SSLI
Sbjct: 390 EAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 446
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
LC ++ +A E NEM G+ P +S L L D L+ KM
Sbjct: 447 TALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 3/200 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ ++I+ L +K +NDA + + + TY L+ +C ++++A +++M
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM 363
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+K + P+ T+ I++ L + + KEA V M +P V TY ++ +C +
Sbjct: 364 RLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERL 420
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A I++ M + P + +S +I LC +D+A F +M I P +S L
Sbjct: 421 DMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Query: 181 IDGLCKSGRISDAWELVNEM 200
L GR +LV +M
Sbjct: 481 KQTLLDEGRKDKVTDLVVKM 500
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y I+ L + + +AY +Y M P V TY ++ FC +L A+ + ++M
Sbjct: 375 YDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMK 431
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + P ++ FS L+ ALC E K+ EA M+ G +P +S L +
Sbjct: 432 GKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKD 491
Query: 122 KAEDIFNTMTRM 133
K D+ M R+
Sbjct: 492 KVTDLVVKMDRL 503
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 3/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +I+S K + ++L + M K++ +V T+ ++ + ++ EA+ N M
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P++ F+ L+ ALCK V++A+ V M + PD TYS L++G+ +
Sbjct: 196 KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLP 254
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA ++F M PD+ +YSIM++ LCK VD+AL + + M P YS L+
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
R+ +A + EM G+ +V ++SL+ A CK + + N ++K+MK +G+
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ + I+L L + G +A +VF+ + IK D TYT++I C+ + A +
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
M G P T+ ++I L +E KA LL +MI G+
Sbjct: 434 WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 170/330 (51%), Gaps = 2/330 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ ++ + + V++A ++ M + P++V + L+S C +++A + M
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD T+SIL++ KE + +A+ V MI G PD+VTYS ++D C V+
Sbjct: 231 DR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I +M P YS++++ +++A++ F +M + DV ++SLI
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
CK+ R+ + + ++ EM S+G+ PN + + +L L + D A + +KM +
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCE 408
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TYT+++ C+ ++ A +V++ + KG + T++++INGLC++ +A L
Sbjct: 409 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVL 468
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
+ +M + G P VT+ + L +E D
Sbjct: 469 LEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 2/207 (0%)
Query: 139 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN 198
V++Y +MI KI+ +L M + + +V T+ ++ ++ ++ +A N
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
M LPPN++ ++ LL ALCK+ +V A + + M+ + PD TY+ILL+G K
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP 251
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYE 318
L A+EVF++++ G + D+ TY+IM++ LCK G DEAL ++ M+ + C P Y
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 319 IIIYALFQEGDNDKAEKLLRQMIARGL 345
++++ E ++A +M G+
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGM 338
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++++I + CK + + Y + EM +K ++P+ + ++ G+ EA + +M
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+K PD T+++++ C++ +++ A V M K G P + T+S L++G C
Sbjct: 404 -IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 462
Query: 121 NKAEDIFNTMTRMELAP 137
KA + M M + P
Sbjct: 463 QKACVLLEEMIEMGIRP 479
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 151/301 (50%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
+ SL V+ A Y EM +ISP+ T ++SG+C G+L + + LL M
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
+++ L+ C++G + A + +M K G +P+VVT+++L+ G+C ++ +A
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+F M + +AP+ +Y+ +ING + + A ++ M I D++TY++LI GLC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
K + A + V E+ L PN T+S+L+ C + D L K M G P+
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQ 449
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
T+ +L+ C+ A +V ++++ + LD RT + NGL G L+ +M
Sbjct: 450 TFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Query: 306 E 306
E
Sbjct: 510 E 510
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 176/346 (50%), Gaps = 4/346 (1%)
Query: 5 IIDSLCKD----KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ DSL K K +A + + +M P V + +S G++ A+ +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I+P+ YT ++++ C+ GK+ + +L M + G + V+Y++L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A + N M + L P+V +++ +I+G C+ + +A +F +M N+ P+ VTY++L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+G + G A+ +M G+ +++TY++L+ LCK A +K++ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+P+ T++ L+ G C E+++ ++ G + + +T+ ++++ C++ FD A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ +M D+ T + L +G + +KLL++M + L
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 124/245 (50%), Gaps = 2/245 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I C+ L++ A L + M + P+VVT+ TLI GFC +L+EA + +M
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ P+ T++ L++ ++G + A M+ G + D++TY++L+ G C +
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + + L P+ ++S +I G C K D L+K M P+ T++ L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI-SLIKKMKHQGI 240
C++ A +++ EM R +P + T + + L K+ D + L+++M+ +
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL-KHQGKDQLVKKLLQEMEGKKF 514
Query: 241 LPDVY 245
L + +
Sbjct: 515 LQESF 519
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 151/301 (50%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
+ SL V+ A Y EM +ISP+ T ++SG+C G+L + + LL M
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
+++ L+ C++G + A + +M K G +P+VVT+++L+ G+C ++ +A
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+F M + +AP+ +Y+ +ING + + A ++ M I D++TY++LI GLC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
K + A + V E+ L PN T+S+L+ C + D L K M G P+
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQ 449
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
T+ +L+ C+ A +V ++++ + LD RT + NGL G L+ +M
Sbjct: 450 TFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Query: 306 E 306
E
Sbjct: 510 E 510
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 176/346 (50%), Gaps = 4/346 (1%)
Query: 5 IIDSLCKD----KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ DSL K K +A + + +M P V + +S G++ A+ +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I+P+ YT ++++ C+ GK+ + +L M + G + V+Y++L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A + N M + L P+V +++ +I+G C+ + +A +F +M N+ P+ VTY++L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I+G + G A+ +M G+ +++TY++L+ LCK A +K++ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+P+ T++ L+ G C E+++ ++ G + + +T+ ++++ C++ FD A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ +M D+ T + L +G + +KLL++M + L
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 124/245 (50%), Gaps = 2/245 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I C+ L++ A L + M + P+VVT+ TLI GFC +L+EA + +M
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ P+ T++ L++ ++G + A M+ G + D++TY++L+ G C +
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA + + L P+ ++S +I G C K D L+K M P+ T++ L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI-SLIKKMKHQGI 240
C++ A +++ EM R +P + T + + L K+ D + L+++M+ +
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL-KHQGKDQLVKKLLQEMEGKKF 514
Query: 241 LPDVY 245
L + +
Sbjct: 515 LQESF 519
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 183/381 (48%), Gaps = 37/381 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +ID K + + A++L M ++ + + T+T LI + G EAV N+M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD FSI++ L ++ + EA++ + K +PDV+ Y++L+ G+C E++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE +F M + P+V +YSI+I+ LC+ + A ++F M P+ +T+++L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI--------- 232
K+GR ++ N+M G P+ ITY+ L++A C++ +++NA+ ++
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 233 --------------------------KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
KM P+ TY IL+ ++
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC-TPDAVTYEIIIYALF 325
+++ K +V TY +++ C G ++ A L +M + C TP YE+++ L
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLR 512
Query: 326 QEGDNDKAEKLLRQMIARGLL 346
+ G K E+L+ +MI +GL+
Sbjct: 513 RAGQLKKHEELVEKMIQKGLV 533
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 157/326 (48%), Gaps = 10/326 (3%)
Query: 22 YSEMLAKRISPDVVTYTTLISGFCIVG-QLKEAVGLLNQMVVKSI--NPDVYTFSILVDA 78
+S++ ++SP VV G G L +++ N + + + ++ ++D
Sbjct: 101 FSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDL 160
Query: 79 LCKEGKVKE---AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
GKV++ A +++ +M + + T++ L+ Y ++A FN M
Sbjct: 161 ---SGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGC 217
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
PD ++SI+I+ L + + +A + F + + PDV+ Y++L+ G C++G IS+A +
Sbjct: 218 VPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEK 276
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
+ EM G+ PNV TYS ++DALC+ + A + M G P+ T+ L+
Sbjct: 277 VFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHV 336
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
K GR + +V+ + G D TY +I C+D + A+ +++ M C +A
Sbjct: 337 KAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAS 396
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMI 341
T+ I + ++ D + A ++ +M+
Sbjct: 397 TFNTIFRYIEKKRDVNGAHRMYSKMM 422
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 167/327 (51%), Gaps = 5/327 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRI---SPDVVTYTTLISGFCIVGQLKEAVGLL 57
++ + ID+ C+ + ++ A + M KR+ P+V Y T+++G+ G + +A+
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 58 NQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
+M + PDV TF+IL++ C+ K A ++ M + G +P+VV++++L+ G+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
++ + + M + + I+++GLC+ VDDA L + + + P Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
SL++ LC + A E++ E+ +G P I ++L++ L K+ + A ++KM +
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
GILPD T+ +LL LC DA + KGY D TY ++++G K+G E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYAL 324
L+++M D PD TY ++ L
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 146/302 (48%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+++ K ++ A Y M +R PDV T+ LI+G+C + A+ L +M
Sbjct: 195 VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREM 254
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K P+V +F+ L+ GK++E + MI+ G + T L+DG C V
Sbjct: 255 KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A + + + P Y ++ LC A+ + +++ + TP + ++L
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
++GL KSGR A + +M + G+ P+ +T++ LL LC + H +A L +G
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGY 434
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD TY +L+ G K GR K+ + + ++L K D+ TY +++GL G F
Sbjct: 435 EPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQV 494
Query: 301 LM 302
M
Sbjct: 495 RM 496
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 143/268 (53%), Gaps = 5/268 (1%)
Query: 72 FSILVDALCKEGKVKEA---KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 128
F +DA C+ K+ A + + +I G KP+V Y+++++GY +++KA +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 129 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
M + PDV +++I+ING C+ D AL+LF++M + P+VV++++LI G SG
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
+I + ++ EM G + T L+D LC+ VD+A L+ + ++ +LP + Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 308
L++ LC + A E+ ++L KG T ++ GL K G ++A M KM +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 309 GCTPDAVTYEIIIYALFQEGDNDKAEKL 336
G PD+VT+ +++ L + A +L
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRL 425
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 154/302 (50%), Gaps = 10/302 (3%)
Query: 17 DAYNLYSEMLAKR------ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVY 70
+ Y + + AKR P++ + L+ C G +KE LL +M + + PD
Sbjct: 211 ERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDAN 269
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
TF++L C+ K+A +L MI+ G KP+ TY + +D +C V++A D+F+ M
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329
Query: 131 -TRMEL--APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
T+ AP +++++MI L K ++ L +M + PDV TY +I+G+C +
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
++ +A++ ++EM ++G PP+++TY+ L LC+N D A+ L +M P V TY
Sbjct: 390 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTY 449
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+L+ + A + ++ + DV TY MINGL EA L+ ++ +
Sbjct: 450 NMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVN 509
Query: 308 NG 309
G
Sbjct: 510 KG 511
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 4/295 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++D+LCK LV + L M R+ PD T+ L G+C V K+A+ LL +M+
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+ +T+ +D C+ G V EA ++ MI G T + + + +
Sbjct: 296 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKND 355
Query: 122 KAEDIFNTMTRM---ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
KAE+ F + RM PDV +Y +I G+C + VD+A +M + PD+VTY+
Sbjct: 356 KAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYN 415
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+ LC++ + +A +L M P+V TY+ L+ + D A + +M +
Sbjct: 416 CFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR 475
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
+ DV TY +++GL R K+A + ++++ KG L R + + L + G
Sbjct: 476 DCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 129/251 (51%), Gaps = 4/251 (1%)
Query: 96 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 155
I+ +P++ ++ L+D C V + E + M R + PD +++++ G C+++
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDP 284
Query: 156 DDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP---PNVITY 212
A+ L ++M P+ TY + ID C++G + +A +L + M ++G P T+
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
+ ++ AL KN + LI +M G LPDV TY +++G+C ++ +A + ++
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
KGY D+ TY + LC++ DEAL L +M ++ C P TY ++I F+ D D
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 333 AEKLLRQMIAR 343
A +M R
Sbjct: 465 AFNTWTEMDKR 475
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
Query: 172 PDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
P++ ++ L+D LCK G + + L+ M R + P+ T++ L C+ A+ L
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV---RTYTIMING 288
+++M G P+ +TY +D C+ G + +A ++F ++ KG + +T+ +MI
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L K+ +E L+ +M GC PD TY+ +I + D+A K L +M +G
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 177/356 (49%), Gaps = 55/356 (15%)
Query: 10 CK-DKLVNDAYNLYSEMLAK------------RISPD-VVTYTT---LISGFCIVGQLKE 52
CK K +DAY++ ++L K R+ D +VT T ++ F G+ +E
Sbjct: 114 CKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 53 AVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 112
AVG+ +++ + + + ++L+D LCKE +V++A+ VL +
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL----------------- 216
Query: 113 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 172
+ + P+ +++I I+G CK V++AL ++M P
Sbjct: 217 -------------------KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
V++Y+++I C+ +E+++EM + G PPN ITY++++ +L + A+ +
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 233 KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQ-DLLIKGYNLDVRTYTIMINGLCK 291
+MK G PD Y L+ L + GRL++A+ VF+ ++ G +++ TY MI C
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCH 377
Query: 292 DGLFDEALALMSKME-DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
D+A+ L+ +ME N C PD TY+ ++ + F+ GD + KLL++M+ + L
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 157/300 (52%), Gaps = 4/300 (1%)
Query: 40 LISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 99
L+ C ++++A +L Q+ I P+ +TF+I + CK +V+EA + M G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 100 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 159
+P V++Y++++ YC E K ++ + M P+ +Y+ +++ L K ++AL
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 160 NLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN-EMHSRGLPPNVITYSSLLDA 218
+ +M PD + Y+ LI L ++GR+ +A + EM G+ N TY+S++
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 219 LCKNHHVDNAISLIKKMKHQGIL-PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY-N 276
C + D AI L+K+M+ + PDV+TY LL K G + + ++ ++++ K + +
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
LD TYT +I LC+ + + A L +M TP T +++ + ++ ++ AE++
Sbjct: 435 LDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ I CK V +A EM P V++YTT+I +C + + +L++M
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+ T++ ++ +L + + +EA V M + G KPD + Y+ L+ +
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 122 KAEDIFNT-MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI-TPDVVTYSS 179
+AE +F M + ++ + +Y+ MI C D A+ L K+M + N+ PDV TY
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 180 LIDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
L+ K G + + +L+ EM ++ L + TY+ L+ LC+ + + A L ++M Q
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEV 266
I P T +LL+ + K + A+ +
Sbjct: 467 DITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 3/238 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+TII C+ Y + SEM A P+ +TYTT++S + +EA+ + +M
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAV-MIKGGEKPDVVTYSSLMDGYCLVNEV 120
PD ++ L+ L + G+++EA+ V V M + G + TY+S++ YC +E
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 121 NKAEDIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN-ITPDVVTYS 178
+KA ++ M L PDV +Y ++ K V + L K+M T++ ++ D TY+
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
LI LC++ A+ L EM S+ + P T LL+ + K + ++A + MK
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 177/356 (49%), Gaps = 55/356 (15%)
Query: 10 CK-DKLVNDAYNLYSEMLAK------------RISPD-VVTYTT---LISGFCIVGQLKE 52
CK K +DAY++ ++L K R+ D +VT T ++ F G+ +E
Sbjct: 114 CKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 53 AVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 112
AVG+ +++ + + + ++L+D LCKE +V++A+ VL +
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL----------------- 216
Query: 113 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 172
+ + P+ +++I I+G CK V++AL ++M P
Sbjct: 217 -------------------KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
V++Y+++I C+ +E+++EM + G PPN ITY++++ +L + A+ +
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 233 KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQ-DLLIKGYNLDVRTYTIMINGLCK 291
+MK G PD Y L+ L + GRL++A+ VF+ ++ G +++ TY MI C
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCH 377
Query: 292 DGLFDEALALMSKME-DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
D+A+ L+ +ME N C PD TY+ ++ + F+ GD + KLL++M+ + L
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 157/300 (52%), Gaps = 4/300 (1%)
Query: 40 LISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 99
L+ C ++++A +L Q+ I P+ +TF+I + CK +V+EA + M G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 100 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 159
+P V++Y++++ YC E K ++ + M P+ +Y+ +++ L K ++AL
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 160 NLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN-EMHSRGLPPNVITYSSLLDA 218
+ +M PD + Y+ LI L ++GR+ +A + EM G+ N TY+S++
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 219 LCKNHHVDNAISLIKKMKHQGIL-PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY-N 276
C + D AI L+K+M+ + PDV+TY LL K G + + ++ ++++ K + +
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
LD TYT +I LC+ + + A L +M TP T +++ + ++ ++ AE++
Sbjct: 435 LDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ I CK V +A EM P V++YTT+I +C + + +L++M
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P+ T++ ++ +L + + +EA V M + G KPD + Y+ L+ +
Sbjct: 287 ANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE 346
Query: 122 KAEDIFNT-MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI-TPDVVTYSS 179
+AE +F M + ++ + +Y+ MI C D A+ L K+M + N+ PDV TY
Sbjct: 347 EAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
Query: 180 LIDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
L+ K G + + +L+ EM ++ L + TY+ L+ LC+ + + A L ++M Q
Sbjct: 407 LLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEV 266
I P T +LL+ + K + A+ +
Sbjct: 467 DITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 3/238 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+TII C+ Y + SEM A P+ +TYTT++S + +EA+ + +M
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAV-MIKGGEKPDVVTYSSLMDGYCLVNEV 120
PD ++ L+ L + G+++EA+ V V M + G + TY+S++ YC +E
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 121 NKAEDIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN-ITPDVVTYS 178
+KA ++ M L PDV +Y ++ K V + L K+M T++ ++ D TY+
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
LI LC++ A+ L EM S+ + P T LL+ + K + ++A + MK
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 161/314 (51%), Gaps = 6/314 (1%)
Query: 34 VVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLA 93
V +Y L+ F G+ K L+++MV TF++L+ C G+ AK +
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVV 205
Query: 94 VMIKG---GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 150
+K +P +Y+++++ V + E ++ M +PDV +Y+I++
Sbjct: 206 QFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
++ +D LF +M + +PD TY+ L+ L K + A +N M G+ P+V+
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
Y++L+D L + +++ + +M G PDV YT+++ G G L A+E+F+++
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
+KG +V TY MI GLC G F EA L+ +ME GC P+ V Y ++ L + G
Sbjct: 386 TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 331 DKAEKLLRQMIARG 344
+A K++R+M+ +G
Sbjct: 446 SEARKVIREMVKKG 459
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 128/250 (51%), Gaps = 4/250 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ I++SL K +Y +ML SPDV+TY L+ +G++ L ++M
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA 281
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+PD YT++IL+ L K K A L M + G P V+ Y++L+DG +
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + M + PDV Y++MI G +D A +F++M + P+V TY+S+I
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG-- 239
GLC +G +A L+ EM SRG PN + YS+L+ L K + A +I++M +G
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHY 461
Query: 240 --ILPDVYTY 247
++P + Y
Sbjct: 462 VHLVPKMMKY 471
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 147/291 (50%)
Query: 19 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDA 78
+ L EM+ T+ LI G K+AV + + P ++++ ++++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 79 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 138
L + K + V M++ G PDV+TY+ L+ + ++++ + +F+ M R +PD
Sbjct: 229 LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPD 288
Query: 139 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN 198
+Y+I+++ L K AL M I P V+ Y++LIDGL ++G + ++
Sbjct: 289 SYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLD 348
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
EM G P+V+ Y+ ++ + +D A + ++M +G LP+V+TY ++ GLC G
Sbjct: 349 EMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 408
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
++A + +++ +G N + Y+ +++ L K G EA ++ +M G
Sbjct: 409 EFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 121/244 (49%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
P +Y +++ V Q K + QM+ +PDV T++IL+ + GK+ +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
M + G PD TY+ L+ N+ A N M + + P V Y+ +I+GL +
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
++ +M PDVV Y+ +I G SG + A E+ EM +G PNV T
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
Y+S++ LC A L+K+M+ +G P+ Y+ L+ L K G+L +A++V ++++
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Query: 272 IKGY 275
KG+
Sbjct: 457 KKGH 460
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 4/272 (1%)
Query: 79 LCKEGKVKEAKNVLAVMIKGGE----KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L + K + AK + GE + V +Y LM + E + + M +
Sbjct: 120 LSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDG 179
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
++++++I + + A+ F + T N P +Y+++++ L +
Sbjct: 180 FPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIE 239
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
+ +M G P+V+TY+ LL + +D L +M G PD YTY ILL L
Sbjct: 240 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 299
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDA 314
KG + A + G + V YT +I+GL + G + + +M GC PD
Sbjct: 300 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 359
Query: 315 VTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
V Y ++I G+ DKA+++ R+M +G L
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 5/326 (1%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+ D + +YS M I P+ T+ L + FC +E L +M + PD+ T++
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
LV + C+ G++KEA + +M + PD+VTY+SL+ G C V +A F+ M
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
+ PD SY+ +I CK M+ + L +M ++ PD T +++G + GR+ A
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 195 ELVNEMHSRG--LPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPDVYTYTILL 251
V E+ +P V + L+ +LC+ A L+ ++ + +G TY L+
Sbjct: 397 NFVVELRRLKVDIPFEVCDF--LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLI 454
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
+ L + +++A + L + LD +TY +I LC+ G EA +LM++M D+
Sbjct: 455 ESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVK 514
Query: 312 PDAVTYEIIIYALFQEGDNDKAEKLL 337
PD+ ++Y +E D DKAE+LL
Sbjct: 515 PDSFICGALVYGYCKELDFDKAERLL 540
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 174/342 (50%), Gaps = 1/342 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ ++ K LV + + ++ E+L S VVT L++G + +++ + + M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I+P+ YTF+IL + C + +E + L M + G +PD+VTY++L+ YC +
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A ++ M R + PD+ +Y+ +I GLCK V +A F +M I PD ++Y++L
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I CK G + + +L++EM + P+ T +++ + + +A++ + +++ +
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEAL 299
L+ LC+ G+ A+ + ++ +G+ TY +I L + +EAL
Sbjct: 408 DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEAL 467
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
L K+++ DA TY +I L + G N +AE L+ +M
Sbjct: 468 VLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF 509
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 169/343 (49%), Gaps = 1/343 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ + + C D + + +M + PD+VTY TL+S +C G+LKEA L M
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + PD+ T++ L+ LCK+G+V+EA M+ G KPD ++Y++L+ YC +
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+++ + + M + PD + +++ G + + A+N ++ + LI
Sbjct: 359 QSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
Query: 182 DGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
LC+ G+ A L++ + G TY++L+++L + ++ A+ L K+K+Q
Sbjct: 419 VSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQ 478
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ D TY L+ LC+ GR ++A+ + ++ D ++ G CK+ FD+A
Sbjct: 479 VLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAER 538
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
L+S D +Y ++ A+ + G K L++ + R
Sbjct: 539 LLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQR 581
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 149/296 (50%), Gaps = 8/296 (2%)
Query: 51 KEAVGLLNQMVVKS--INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
KE V + +V + N D F +LV K G V+E V ++ G VVT +
Sbjct: 146 KEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCN 205
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK---IKMVDDALNLFKQM 165
L++G ++ + +++ M R+ + P+ +++I+ N C + VDD L ++M
Sbjct: 206 HLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFL---EKM 262
Query: 166 HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
E PD+VTY++L+ C+ GR+ +A+ L M+ R + P+++TY+SL+ LCK+ V
Sbjct: 263 EEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRV 322
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
A +M +GI PD +Y L+ CK G ++ ++++ ++L D T ++
Sbjct: 323 REAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVI 382
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
+ G ++G A+ + ++ + +I +L QEG A+ LL ++I
Sbjct: 383 VEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRII 438
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 136/266 (51%), Gaps = 18/266 (6%)
Query: 99 GEKPDVVTYSSL-------------MDGYC-LVNEVNKAE--DIFNTMTRM--ELAPDVQ 140
G++P+V Y L M C L+ +K E D+F + E D
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPV 167
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
+ +++ G K+ +V++ +F+++ + VVT + L++GL K + D W++ + M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
G+ PN T++ L + C + + ++KM+ +G PD+ TY L+ C+ GRL
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
K+A +++ + + D+ TYT +I GLCKDG EA +M D G PD ++Y +
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 321 IYALFQEGDNDKAEKLLRQMIARGLL 346
IYA +EG +++KLL +M+ ++
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVV 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKR---ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+I SLC++ A +L ++ + P+ TY LI ++EA+ L ++
Sbjct: 417 LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALVLKGKLK 474
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ D T+ L+ LC+ G+ +EA++++A M KPD +L+ GYC + +
Sbjct: 475 NQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFD 534
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM-VDDALNLFKQMHTENITPDVVTYSSL 180
KAE + + D +SY+ ++ +C+ AL L ++M P+ +T L
Sbjct: 535 KAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYL 594
Query: 181 IDGL 184
I L
Sbjct: 595 IQVL 598
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 1/341 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ + + + L ++A ++ M+ I P V L+ C + A +
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I P T+SILV + A+ V M++ D++ Y++L+D C +V
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ +F M + L PD S++I I+ C V A + +M ++ P+V T++ +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I LCK+ ++ DA+ L++EM +G P+ TY+S++ C + V+ A L+ +M
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC-KDGLFDEAL 299
LPD +TY ++L L + GR A E+++ + + + V TYT+MI+GL K G +EA
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
M D G P + T E++ L G D + L +M
Sbjct: 440 RYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 161/330 (48%), Gaps = 14/330 (4%)
Query: 25 MLAKRISPDVV----TYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVY-----TFSIL 75
+ A+RI PD +Y L+ I+G K+ LL ++++ + + F I+
Sbjct: 90 LWARRI-PDFAHSLESYHILVE---ILGSSKQ-FALLWDFLIEAREYNYFEISSKVFWIV 144
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
A + EA M++ G KP V L+ C VN A++ F +
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGI 204
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
P ++YSI++ G +I+ A +F +M N D++ Y++L+D LCKSG + ++
Sbjct: 205 VPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYK 264
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
+ EM + GL P+ +++ + A C V +A ++ +MK ++P+VYT+ ++ LC
Sbjct: 265 MFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLC 324
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
K ++ DA + +++ KG N D TY ++ C + A L+S+M+ C PD
Sbjct: 325 KNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRH 384
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
TY +++ L + G D+A ++ M R
Sbjct: 385 TYNMVLKLLIRIGRFDRATEIWEGMSERKF 414
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 150/303 (49%), Gaps = 1/303 (0%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++ SLC K VN A + + I P TY+ L+ G+ + A + ++M+ ++
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
D+ ++ L+DALCK G V + M G KPD +++ + YC +V+ A
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAY 298
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+ + M R +L P+V +++ +I LCK + VDDA L +M + PD TY+S++
Sbjct: 299 KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYH 358
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
C ++ A +L++ M P+ TY+ +L L + D A + + M + P V
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTV 418
Query: 245 YTYTILLDGLC-KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
TYT+++ GL K G+L++A F+ ++ +G T ++ N L G D L
Sbjct: 419 ATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAG 478
Query: 304 KME 306
KME
Sbjct: 479 KME 481
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++D+LCK V+ Y ++ EM + PD ++ I +C G + A +L++M
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+VYTF+ ++ LCK KV +A +L MI+ G PD TY+S+M +C EVN
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + + M R + PD +Y++++ L +I D A +++ M P V TY+ +I
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Query: 182 DGLC-KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
GL K G++ +A M G+PP T L + L +D L KM+
Sbjct: 426 HGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 163/342 (47%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S +I+ L K V+ A L +++ + P + Y +I G C G+ +E++ LL +M
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKD 502
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ P +T + + L + A ++L M G +P + + L+ C
Sbjct: 503 AGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVD 562
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A + + + + + I+GL K + VD L LF+ + PDV+ Y LI
Sbjct: 563 ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIK 622
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
LCK+ R +A L NEM S+GL P V TY+S++D CK +D +S I +M P
Sbjct: 623 ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNP 682
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV TYT L+ GLC GR +A + ++ K + T+ +I GLCK G EAL
Sbjct: 683 DVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYF 742
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+ME+ PD+ Y ++ + + + + R+M+ +G
Sbjct: 743 REMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 171/363 (47%), Gaps = 22/363 (6%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +I K+ ++ A+ L+ +M ++ D+ Y LI G C L+ A+ L ++
Sbjct: 286 YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIK 345
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV-VTYSSLMDGYCLVNEV 120
I PD IL LC + E + V+I +K V + Y SL +G+ + V
Sbjct: 346 RSGIPPDR---GILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLV 402
Query: 121 NKAED-IFNTMTRME-----------------LAPDVQSYSIMINGLCKIKMVDDALNLF 162
++A I N M E + PD S SI+IN L K VD A+ L
Sbjct: 403 HEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLL 462
Query: 163 KQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 222
+ + P + Y+++I+G+CK GR ++ +L+ EM G+ P+ T + + L +
Sbjct: 463 HDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAER 522
Query: 223 HHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
A+ L+KKM+ G P + T L+ LC+ GR DA + D+ +G+ +
Sbjct: 523 CDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS 582
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
T I+GL K+ D L L + NG PD + Y ++I AL + +A+ L +M++
Sbjct: 583 TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVS 642
Query: 343 RGL 345
+GL
Sbjct: 643 KGL 645
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 159/333 (47%), Gaps = 17/333 (5%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y ++ + ++ LV++AY+ ++ S V E V LL
Sbjct: 388 LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGV----------------SEIVKLLKDH 431
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K+I PD + SI+++ L K KV A +L +++ G P + Y+++++G C
Sbjct: 432 N-KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++ + M + P + + + L + AL+L K+M P + + L
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ LC++GR DA + ++++ G +++ ++ +D L KN VD + L + + G
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PDV Y +L+ LCK R +A +F +++ KG V TY MI+G CK+G D L+
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
+ +M ++ PD +TY +I+ L G +A
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 12/288 (4%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKE------AV 54
MY+ II+ +CK+ ++ L EM + P T CI G L E A+
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN------CIYGCLAERCDFVGAL 529
Query: 55 GLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 114
LL +M P + + LV LC+ G+ +A L + G +V ++ +DG
Sbjct: 530 DLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGL 589
Query: 115 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
V++ ++F + PDV +Y ++I LCK +A LF +M ++ + P V
Sbjct: 590 IKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTV 649
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
TY+S+IDG CK G I + M+ P+VITY+SL+ LC + AI +
Sbjct: 650 ATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNE 709
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
MK + P+ T+ L+ GLCK G +A F+++ K D Y
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 160/332 (48%), Gaps = 23/332 (6%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D T T ++ +C G+ + A+ + N+++ + D + +ILV + CK G+V +A ++
Sbjct: 213 DKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELI 271
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
++ + + + TY L+ G+ + ++KA +F M RM + D+ Y ++I GLCK
Sbjct: 272 EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKH 331
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE-LVNEMHSRGLPPNVIT 211
K ++ AL+L+ ++ I PD L+ + +S E ++ ++ + + ++
Sbjct: 332 KDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV---MLL 388
Query: 212 YSSLLDALCKNHHVDNAISLIKKM------------------KHQGILPDVYTYTILLDG 253
Y SL + +N V A S I+ + ++ ILPD + +I+++
Sbjct: 389 YKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINC 448
Query: 254 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPD 313
L K ++ A + D++ G Y +I G+CK+G +E+L L+ +M+D G P
Sbjct: 449 LVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 314 AVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
T I L + D A LL++M G
Sbjct: 509 QFTLNCIYGCLAERCDFVGALDLLKKMRFYGF 540
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 115/238 (48%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++ LC++ DA ++ + +V T I G + + L +
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
PDV + +L+ ALCK + EA + M+ G KP V TY+S++DG+C E+++
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGL 669
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
M E PDV +Y+ +I+GLC +A+ + +M ++ P+ +T+ +LI GL
Sbjct: 670 SCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGL 729
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
CK G +A EM + + P+ Y SL+ + + +++ + ++M H+G P
Sbjct: 730 CKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 12/226 (5%)
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI-TPDVVTYSSLIDG 183
D+ N+ R ++P ++ I L +VD+A ++F ++ + P+ TY+ L++
Sbjct: 131 DVLNS--RCFMSPG--AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEA 186
Query: 184 LCKSGRISDAWELVN----EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+ KS S + ELV EM G + T + +L C + A+S+ ++ +G
Sbjct: 187 ISKSN--SSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG 244
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
L D + TIL+ CK G++ A E+ + L + L+ +TY ++I+G K+ D+A
Sbjct: 245 WL-DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAF 303
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L KM G D Y+++I L + D + A L ++ G+
Sbjct: 304 QLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGI 349
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++ID CK+ ++ + M +PDV+TYT+LI G C G+ EA+ N+M
Sbjct: 652 YNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMK 711
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K P+ TF L+ LCK G EA M + +PD Y SL+ + +N
Sbjct: 712 GKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENIN 771
Query: 122 KAEDIFNTMTRMELAP 137
IF M P
Sbjct: 772 AGFGIFREMVHKGRFP 787
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 180/405 (44%), Gaps = 74/405 (18%)
Query: 11 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL---LNQMVVKSINP 67
K +VN A ++ + + + ++ +S FC G + VG+ L +M+ + P
Sbjct: 155 KLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYP 210
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
+ F ++ C+ G V EA V+ +MI G V +S L+ G+ E KA D+F
Sbjct: 211 NRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLF 270
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
N M ++ +P++ +Y+ +I G + MVD+A + ++ +E + PD+V + +I +
Sbjct: 271 NKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRL 330
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD--------------------- 226
GR +A ++ + R L P+ T++S+L +LC + D
Sbjct: 331 GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLL 390
Query: 227 -----------NAISLIKKMKHQGILPDVYTYTILLDGLCKG------------------ 257
A+ ++ M ++ D YTYT+ L LC+G
Sbjct: 391 SNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK 450
Query: 258 -----------------GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
G+ A +F+ +++ Y LDV +YT+ I GL + +EA +
Sbjct: 451 HLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYS 510
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L M++ G P+ TY II L +E + +K K+LR+ I G+
Sbjct: 511 LCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 158/340 (46%), Gaps = 33/340 (9%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++S ++ + A +L+++M+ SP++VTYT+LI GF +G + EA +L+++
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + PD+ ++++ + G+ +EA+ V + K PD T++S++ CL +
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Query: 121 N--------------------------------KAEDIFNTMTRMELAPDVQSYSIMING 148
+ A + + M+ + A D +Y++ ++
Sbjct: 369 DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSA 428
Query: 149 LCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 208
LC+ A+ ++K + E D +S++ID L + G+ + A L P +
Sbjct: 429 LCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLD 488
Query: 209 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
V++Y+ + L + ++ A SL MK GI P+ TY ++ GLCK + +++ +
Sbjct: 489 VVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILR 548
Query: 269 DLLIKGYNLDVRTYTIMINGLCK-DGLFDEALALMSKMED 307
+ + +G LD T + + L + G F E ++ K +
Sbjct: 549 ECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFEKWKS 588
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 109/229 (47%), Gaps = 7/229 (3%)
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+KA +++ M+ P+ ++ ++M++ K+ +V+ AL +F+ + N ++
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDIA 180
Query: 181 IDGLCKSGRISDAWEL---VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ C G D + + M G PN + +L C+ V A ++ M
Sbjct: 181 LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
GI V +++L+ G + G + A ++F ++ G + ++ TYT +I G G+ DE
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
A ++SK++ G PD V ++I+ + G ++A K+ + R L+
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLV 349
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 186/368 (50%), Gaps = 26/368 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM- 60
YS I ++C+ L+ + +L M ++ D L+ G+ + A+G+L+ M
Sbjct: 95 YSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYME 154
Query: 61 -VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK---------------PDV 104
+ +NP VY S+L+ AL K+ +++ A ++L +++ + P
Sbjct: 155 ELGDCLNPSVYD-SVLI-ALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGT 212
Query: 105 VTYSSLMDGYCLVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFK 163
V + L+ G + ++ + +F + M+ D SY+I I+G +D AL+LFK
Sbjct: 213 VAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFK 272
Query: 164 QM------HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
+M + + PD+ TY+SLI LC G+ DA + +E+ G P+ TY L+
Sbjct: 273 EMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ 332
Query: 218 ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 277
CK++ +D+A+ + +M++ G +PD Y LLDG K ++ +A ++F+ ++ +G
Sbjct: 333 GCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRA 392
Query: 278 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
TY I+I+GL ++G + L ++ G DA+T+ I+ L +EG + A KL+
Sbjct: 393 SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLV 452
Query: 338 RQMIARGL 345
+M RG
Sbjct: 453 EEMETRGF 460
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 28 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKE 87
KR D +Y I GF G L A+ L +M +S VY S
Sbjct: 242 KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERS---SVYGSSF------------- 285
Query: 88 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
PD+ TY+SL+ CL + A +++ + PD +Y I+I
Sbjct: 286 -------------GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ 332
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
G CK +DDA+ ++ +M PD + Y+ L+DG K+ ++++A +L +M G+
Sbjct: 333 GCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRA 392
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+ TY+ L+D L +N + +L +K +G D T++I+ LC+ G+L+ A ++
Sbjct: 393 SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLV 452
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
+++ +G+++D+ T + ++ G K G +D LM + + P+ + + + A
Sbjct: 453 EEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEA 508
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 18 AYNLYSEMLAKR------ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYT 71
A +L+ EM + PD+ TY +LI C+ G+ K+A+ + +++ V PD T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 131
+ IL+ CK ++ +A + M G PD + Y+ L+DG +V +A +F M
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 132 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRIS 191
+ + +Y+I+I+GL + + LF + + D +T+S + LC+ G++
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 192 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
A +LV EM +RG +++T SSLL K D L+K ++ ++P+V + +
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Query: 252 DGLCKGGRLKD 262
+ K + KD
Sbjct: 507 EASLKRPQSKD 517
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 161/451 (35%), Gaps = 116/451 (25%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +I CK ++DA +Y EM PD + Y L+ G ++ EA L +MV
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 62 VKSINPDVYTFSILVDAL-----------------------------------CKEGKVK 86
+ + +T++IL+D L C+EGK++
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
A ++ M G D+VT SSL+ G+ + E + + L P+V ++ +
Sbjct: 447 GAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDA------------- 193
K D ++ TP + S +D + G D
Sbjct: 507 EASLKRPQSKD----------KDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDP 556
Query: 194 WELVNEM----HSRGLPPNVI---------------------TYSSL------LDALCKN 222
W M H R P + T+ S+ L CK
Sbjct: 557 WSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKL 616
Query: 223 HHVDNAI---------------SLIKKMKHQ---GIL---------PDVYTYTILLDGLC 255
+ N + S +KK Q G+L D+ TY +++ GL
Sbjct: 617 FEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLG 676
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
K GR A V L +G LD+ Y +IN L K DEA L M+ NG PD V
Sbjct: 677 KMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVV 736
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+Y +I + G +A K L+ M+ G L
Sbjct: 737 SYNTMIEVNSKAGKLKEAYKYLKAMLDAGCL 767
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 27 AKRISPDVVTYTTLISGFCIVGQLKEAVGLL---NQMVVKSINPDVYTFSILVDALCKEG 83
AK S DV T +S + G L A L N M V + YT++ ++ + K+G
Sbjct: 587 AKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTS--YTYNSMMSSFVKKG 644
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
+ A+ VL M + D+ TY+ ++ G + + A + + +T+ D+ Y+
Sbjct: 645 YFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYN 704
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+IN L K +D+A LF M + I PDVV+Y+++I+ K+G++ +A++ + M
Sbjct: 705 TLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA 764
Query: 204 GLPPNVITYSSLLDALCK 221
G PN +T ++LD L K
Sbjct: 765 GCLPNHVT-DTILDYLGK 781
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%)
Query: 106 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 165
TY+S+M + A + + M A D+ +Y+++I GL K+ D A + ++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 166 HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
+ D+V Y++LI+ L K+ R+ +A +L + M S G+ P+V++Y+++++ K +
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 226 DNAISLIKKMKHQGILPDVYTYTIL 250
A +K M G LP+ T TIL
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
+YS + +C+ ++ + +L M + + D L+D L +SG+ A +++ M
Sbjct: 94 AYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYM 153
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-----KHQ----------GILPDVY 245
G N Y S+L AL K H + A+S++ K+ H LP
Sbjct: 154 EELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTV 213
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
LL GL + + + VF+ L +K + D +Y I I+G G D AL+L +
Sbjct: 214 AVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKE 273
Query: 305 MEDNGCT------PDAVTYEIIIYAL 324
M++ PD TY +I+ L
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVL 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+T+I++L K +++A L+ M + I+PDVV+Y T+I G+LKEA L M
Sbjct: 702 MYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM 761
Query: 61 VVKSINPDVYTFSILVDALCKE 82
+ P+ T +IL D L KE
Sbjct: 762 LDAGCLPNHVTDTIL-DYLGKE 782
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 172/350 (49%), Gaps = 8/350 (2%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ-LKEAVGLLNQ 59
+Y+ I L + +DA+ +Y M + PD VT LI+ G+ KE + +
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M K + F LV + C EG +EA + M K G + + + Y++LMD Y N
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ + E +F M L P +Y+I+++ + D L ++M + P+V +Y+
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC 454
Query: 180 LIDGLCKSGRISD-AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
LI ++ ++SD A + M GL P+ +Y++L+ A + + A + ++M +
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE 514
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL---IKGYNLDVRTYTIMINGLCKDGLF 295
GI P V TYT +LD + G E+++ +L IKG + TY +++G K GL+
Sbjct: 515 GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRI---TYNTLLDGFAKQGLY 571
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
EA ++S+ G P +TY +++ A + G + K +LL++M A L
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 156/333 (46%), Gaps = 1/333 (0%)
Query: 13 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTF 72
+ + + ++ +M K + + L+ FC G +EA+ + +M K I + +
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVY 382
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
+ L+DA K ++E + + M G KP TY+ LMD Y + + E + M
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 133 MELAPDVQSYSIMINGLCKIK-MVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRIS 191
+ L P+V+SY+ +I+ + K M D A + F +M + P +Y++LI SG
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 192 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
A+ EM G+ P+V TY+S+LDA ++ + + K M + I TY LL
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL 562
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
DG K G +A++V + G V TY +++N + G + L+ +M
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLK 622
Query: 312 PDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
PD++TY +IYA + D +A + M+ G
Sbjct: 623 PDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 7/322 (2%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ ++ S C + L +A + +EM K I + + Y TL+ + ++E GL +M
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + P T++IL+DA + + + +L M G +P+V +Y+ L+ Y ++
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 121 NK-AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ A D F M ++ L P SY+ +I+ + A F++M E I P V TY+S
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 180 LIDGLCKS---GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
++D +S G++ + W+L+ +G ITY++LLD K A ++ +
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKG---TRITYNTLLDGFAKQGLYIEARDVVSEFS 582
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
G+ P V TY +L++ +GG+ ++ +++ D TY+ MI + F
Sbjct: 583 KMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFK 642
Query: 297 EALALMSKMEDNGCTPDAVTYE 318
A M +G PD +YE
Sbjct: 643 RAFFYHKMMVKSGQVPDPRSYE 664
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 37/245 (15%)
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRIS-DAWEL 196
DV+ Y+ I+GL + DDA +++ M N+ PD VT + LI L K+GR + + WE+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 197 V-----------------------------------NEMHSRGLPPNVITYSSLLDALCK 221
EM +G+ N I Y++L+DA K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 222 NHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 281
++H++ L +M+ +G+ P TY IL+D + + + + +++ G +V++
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 282 YTIMINGLCK-DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
YT +I+ + + D A +M+ G P + +Y +I+A G ++KA +M
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 341 IARGL 345
G+
Sbjct: 512 CKEGI 516
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 1/215 (0%)
Query: 2 YSTIIDSLCKDKLVND-AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+ +I + + K ++D A + + M + P +YT LI + + G ++A +M
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I P V T++ ++DA + G + + +M++ K +TY++L+DG+
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A D+ + ++M L P V +Y++++N + L K+M N+ PD +TYS++
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
I + A+ M G P+ +Y L
Sbjct: 632 IYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Query: 143 SIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHS 202
S++ L + +M D L L + + DV Y++ I GL S R DAWE+ M
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 203 RGLPPNVITYSSLLDALCK-NHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
+ P+ +T + L+ L K + +KM +G+ + L+ C G +
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
+A + ++ KG + Y +++ K +E L ++M D G P A TY I++
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 322 YALFQEGDNDKAEKLLRQMIARGL 345
A + D E LLR+M GL
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGL 445
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 182/364 (50%), Gaps = 27/364 (7%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVV---TYTTLISGFCIVGQLKEAVGLL 57
++ ++++SLCK + A++L + + ++V T+ LI + G +++A+
Sbjct: 137 LFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF 196
Query: 58 NQMVVKSINP------DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK-----PDVVT 106
+S P ++ +L+DALCKEG V+EA L + GG P V
Sbjct: 197 E--FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERI--GGTMDSNWVPSVRI 252
Query: 107 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
++ L++G+ ++ +AE ++ M M + P V +Y +I G C+++ V A+ + ++M
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
+ + + ++ +IDGL ++GR+S+A ++ P ++TY+SL+ CK +
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 227 NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
A ++K M +G+ P TY K + ++ ++ L+ G++ D TY +++
Sbjct: 373 GASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL---------FQEGDNDKAEKLL 337
LC+DG A+ + +M++ G PD +T ++I+ L F+E DN ++
Sbjct: 433 KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGII 492
Query: 338 RQMI 341
Q I
Sbjct: 493 PQYI 496
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 135/258 (52%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++ +++ + + + A L+ EM A + P VVTY TLI G+C + +++ A+ +L +M
Sbjct: 252 IFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEM 311
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + + F+ ++D L + G++ EA ++ P +VTY+SL+ +C ++
Sbjct: 312 KMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDL 371
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A I M + P +Y+ K ++ +NL+ ++ +PD +TY +
Sbjct: 372 PGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLI 431
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ LC+ G++S A ++ EM +RG+ P+++T + L+ LC+ ++ A +GI
Sbjct: 432 LKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 241 LPDVYTYTILLDGLCKGG 258
+P T+ ++ +GL G
Sbjct: 492 IPQYITFKMIDNGLRSKG 509
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 169/348 (48%), Gaps = 19/348 (5%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRIS----PDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++D+LCK+ V +A ++Y E + + P V + L++G+ +LK+A L +M
Sbjct: 218 LLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
++ P V T+ L++ C+ +V+ A VL M + + + ++ ++DG + E
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDG---LGEA 333
Query: 121 NKAEDIFNTMTRM---ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
+ + M R E P + +Y+ ++ CK + A + K M T + P TY
Sbjct: 334 GRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ K + + L ++ G P+ +TY +L LC++ + A+ + K+MK+
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
+GI PD+ T T+L+ LC+ L++A E F + + +G T+ ++ NGL G+ D
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDM 513
Query: 298 A---LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
A +LMS + + P+ TY + A D D+ + +L + A
Sbjct: 514 AKRLSSLMSSLPHSKKLPN--TYREAVDA---PPDKDRRKSILHRAEA 556
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++ IID L + +++A + P +VTY +L+ FC G L A +L M
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + ++P T++ K K +E N+ +I+ G PD +TY ++ C ++
Sbjct: 382 MTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKL 441
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A + M + PD+ + +++I+ LC+++M+++A F I P +T+ +
Sbjct: 442 SLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMI 501
Query: 181 IDGLCKSGRISDAWELVNEM----HSRGLPPNVITYSSLLDA 218
+GL G A L + M HS+ LP TY +DA
Sbjct: 502 DNGLRSKGMSDMAKRLSSLMSSLPHSKKLPN---TYREAVDA 540
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 139/319 (43%), Gaps = 45/319 (14%)
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV---TYSSLMDGYCLVNEVNKAEDIFN 128
F +V++LCK + + A +++ ++ E ++V T+ L+ Y V +A F
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 129 TMTRMEL----APDVQSYSIMINGLCKIKMVDDA---LNLFKQMHTENITPDVVTYSSLI 181
E A +++ ++++ LCK V +A L N P V ++ L+
Sbjct: 198 FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILL 257
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK----- 236
+G +S ++ A +L EM + + P V+TY +L++ C+ V A+ ++++MK
Sbjct: 258 NGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEME 317
Query: 237 --------------HQGIL----------------PDVYTYTILLDGLCKGGRLKDAQEV 266
G L P + TY L+ CK G L A ++
Sbjct: 318 INFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKI 377
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+ ++ +G + TY K +E + L K+ + G +PD +TY +I+ L +
Sbjct: 378 LKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCE 437
Query: 327 EGDNDKAEKLLRQMIARGL 345
+G A ++ ++M RG+
Sbjct: 438 DGKLSLAMQVNKEMKNRGI 456
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 168/341 (49%), Gaps = 1/341 (0%)
Query: 1 MYSTIIDSLCKDKL-VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+Y+ I+ L K K +A +++ M R P TY +I+ + + + L +
Sbjct: 230 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCE 289
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M P++ T++ LV+A +EG ++A+ + + + G +PDV Y++LM+ Y
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
A +IF+ M M PD SY+IM++ + + DA +F++M I P + ++
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ K+ ++ +V EM G+ P+ +S+L+ + ++ +M++
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 469
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
D+ TY IL++ K G L+ +E+F +L K + DV T+T I + L+ + L
Sbjct: 470 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 529
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+ +M D+GC PD T ++++ A E ++ +LR M
Sbjct: 530 EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 150/286 (52%), Gaps = 4/286 (1%)
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
S PDV F++L+DA ++ + KEA+++ +++ P TY+ L+ YC+ + +A
Sbjct: 150 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 209
Query: 124 EDIFNTMTRMELAPD---VQSYSIMINGLCKIK-MVDDALNLFKQMHTENITPDVVTYSS 179
E + M ++P V Y+ I GL K K ++A+++F++M + P TY+
Sbjct: 210 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 269
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+I+ K+ + +W+L EM S PN+ TY++L++A + + A + ++++ G
Sbjct: 270 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PDVY Y L++ + G A E+F + G D +Y IM++ + GL +A
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
A+ +M+ G P ++ +++ A + D K E ++++M G+
Sbjct: 390 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 151/315 (47%), Gaps = 4/315 (1%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
PDV+ + LI + Q KEA L Q++ P T+++L+ A C G ++ A+
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 210
Query: 90 NVLAVMIKGGEKPD---VVTYSSLMDGYC-LVNEVNKAEDIFNTMTRMELAPDVQSYSIM 145
VL M P V Y++ ++G +A D+F M R P ++Y++M
Sbjct: 211 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 270
Query: 146 INGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
IN K + L+ +M + P++ TY++L++ + G A E+ ++ GL
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P+V Y++L+++ + + A + M+H G PD +Y I++D + G DA+
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
VF+++ G ++++ ++++ K + A++ +M +NG PD ++
Sbjct: 391 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 450
Query: 326 QEGDNDKAEKLLRQM 340
+ G K EK+L +M
Sbjct: 451 RLGQFTKMEKILAEM 465
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 172/343 (50%), Gaps = 4/343 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +ID+ + +A +LY ++L R P TY LI +C+ G ++ A +L +M
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 62 VKSINPD---VYTFSILVDALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
++P V ++ ++ L K +G +EA +V M + KP TY+ +++ Y
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
++ + ++ M + P++ +Y+ ++N + + + A +F+Q+ + + PDV Y
Sbjct: 278 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 337
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
++L++ ++G A E+ + M G P+ +Y+ ++DA + +A ++ ++MK
Sbjct: 338 NALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR 397
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
GI P + ++ +LL K + + + +++ G D M+N + G F +
Sbjct: 398 LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK 457
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
++++ME+ CT D TY I+I + G ++ E+L ++
Sbjct: 458 MEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 4/347 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD---VVTYTTLISGFCIV-GQLKEAVGLL 57
Y+ +I + C L+ A + EM +SP V Y I G G +EA+ +
Sbjct: 193 YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 252
Query: 58 NQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
+M P T++++++ K K + + M KP++ TY++L++ +
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 312
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
KAE+IF + L PDV Y+ ++ + A +F M PD +Y
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 372
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ ++D ++G SDA + EM G+ P + ++ LL A K V +++K+M
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
G+ PD + +L+ + G+ +++ ++ D+ TY I+IN K G +
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L ++++ PD VT+ I A ++ K ++ +MI G
Sbjct: 493 IEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++D+ + L +DA ++ EM I+P + ++ L+S + + + ++ +M
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD + + +++ + G+ + + +LA M G D+ TY+ L++ Y +
Sbjct: 432 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 491
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ E++F + PDV +++ I + K+ L +F++M PD T L+
Sbjct: 492 RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 551
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
++ ++ MH +G +T SSL+ L
Sbjct: 552 SACSSEEQVEQVTSVLRTMH-KG-----VTVSSLVPKL 583
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 168/341 (49%), Gaps = 1/341 (0%)
Query: 1 MYSTIIDSLCKDKL-VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+Y+ I+ L K K +A +++ M R P TY +I+ + + + L +
Sbjct: 252 VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCE 311
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M P++ T++ LV+A +EG ++A+ + + + G +PDV Y++LM+ Y
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
A +IF+ M M PD SY+IM++ + + DA +F++M I P + ++
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+ K+ ++ +V EM G+ P+ +S+L+ + ++ +M++
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 491
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
D+ TY IL++ K G L+ +E+F +L K + DV T+T I + L+ + L
Sbjct: 492 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCL 551
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+ +M D+GC PD T ++++ A E ++ +LR M
Sbjct: 552 EVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 150/286 (52%), Gaps = 4/286 (1%)
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
S PDV F++L+DA ++ + KEA+++ +++ P TY+ L+ YC+ + +A
Sbjct: 172 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 231
Query: 124 EDIFNTMTRMELAPD---VQSYSIMINGLCKIK-MVDDALNLFKQMHTENITPDVVTYSS 179
E + M ++P V Y+ I GL K K ++A+++F++M + P TY+
Sbjct: 232 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 291
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+I+ K+ + +W+L EM S PN+ TY++L++A + + A + ++++ G
Sbjct: 292 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PDVY Y L++ + G A E+F + G D +Y IM++ + GL +A
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
A+ +M+ G P ++ +++ A + D K E ++++M G+
Sbjct: 412 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 151/315 (47%), Gaps = 4/315 (1%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
PDV+ + LI + Q KEA L Q++ P T+++L+ A C G ++ A+
Sbjct: 173 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 232
Query: 90 NVLAVMIKGGEKPD---VVTYSSLMDGYC-LVNEVNKAEDIFNTMTRMELAPDVQSYSIM 145
VL M P V Y++ ++G +A D+F M R P ++Y++M
Sbjct: 233 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 292
Query: 146 INGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
IN K + L+ +M + P++ TY++L++ + G A E+ ++ GL
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P+V Y++L+++ + + A + M+H G PD +Y I++D + G DA+
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
VF+++ G ++++ ++++ K + A++ +M +NG PD ++
Sbjct: 413 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 472
Query: 326 QEGDNDKAEKLLRQM 340
+ G K EK+L +M
Sbjct: 473 RLGQFTKMEKILAEM 487
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 172/343 (50%), Gaps = 4/343 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +ID+ + +A +LY ++L R P TY LI +C+ G ++ A +L +M
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 62 VKSINPD---VYTFSILVDALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
++P V ++ ++ L K +G +EA +V M + KP TY+ +++ Y
Sbjct: 240 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 299
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
++ + ++ M + P++ +Y+ ++N + + + A +F+Q+ + + PDV Y
Sbjct: 300 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 359
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
++L++ ++G A E+ + M G P+ +Y+ ++DA + +A ++ ++MK
Sbjct: 360 NALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR 419
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
GI P + ++ +LL K + + + +++ G D M+N + G F +
Sbjct: 420 LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK 479
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
++++ME+ CT D TY I+I + G ++ E+L ++
Sbjct: 480 MEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 4/347 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD---VVTYTTLISGFCIV-GQLKEAVGLL 57
Y+ +I + C L+ A + EM +SP V Y I G G +EA+ +
Sbjct: 215 YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 274
Query: 58 NQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
+M P T++++++ K K + + M KP++ TY++L++ +
Sbjct: 275 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 334
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
KAE+IF + L PDV Y+ ++ + A +F M PD +Y
Sbjct: 335 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 394
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ ++D ++G SDA + EM G+ P + ++ LL A K V +++K+M
Sbjct: 395 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 454
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
G+ PD + +L+ + G+ +++ ++ D+ TY I+IN K G +
Sbjct: 455 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 514
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L ++++ PD VT+ I A ++ K ++ +MI G
Sbjct: 515 IEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++D+ + L +DA ++ EM I+P + ++ L+S + + + ++ +M
Sbjct: 394 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 453
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD + + +++ + G+ + + +LA M G D+ TY+ L++ Y +
Sbjct: 454 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 513
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ E++F + PDV +++ I + K+ L +F++M PD T L+
Sbjct: 514 RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 573
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
++ ++ MH +G +T SSL+ L
Sbjct: 574 SACSSEEQVEQVTSVLRTMH-KG-----VTVSSLVPKL 605
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 155/300 (51%), Gaps = 2/300 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+T+I+ L + + A + + R+ P+ V++ LI GF + A + ++M+
Sbjct: 155 NTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE 214
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ P V T++ L+ LC+ + +AK++L MIK +P+ VT+ LM G C E N+
Sbjct: 215 MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A+ + M P + +Y I+++ L K +D+A L +M I PDVV Y+ L++
Sbjct: 275 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
LC R+ +A+ ++ EM +G PN TY ++D C+ D+ ++++ M P
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC-KD-GLFDEALA 300
T+ ++ GL KGG L A V + + K + + +++ LC KD G++ EAL+
Sbjct: 395 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALS 454
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 172/344 (50%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS++I L K + + + + + + + LI + G + +A+ + +++
Sbjct: 84 YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKIT 143
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + + L++ L G++++AK+ +P+ V+++ L+ G+ +
Sbjct: 144 SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWE 203
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F+ M ME+ P V +Y+ +I LC+ + A +L + M + I P+ VT+ L+
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLM 263
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
GLC G ++A +L+ +M RG P ++ Y L+ L K +D A L+ +MK + I
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIK 323
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PDV Y IL++ LC R+ +A V ++ +KG + TY +MI+G C+ FD L +
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ M + P T+ ++ L + G+ D A +L M + L
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 146/305 (47%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ +I K V+ A +++ ++ + + + TLI+ G+L++A +
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P+ +F+IL+ + + A V M++ +P VVTY+SL+ C +++
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA+ + M + + P+ ++ +++ GLC ++A L M P +V Y L
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ L K GRI +A L+ EM R + P+V+ Y+ L++ LC V A ++ +M+ +G
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ TY +++DG C+ V +L + T+ M+ GL K G D A
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACF 417
Query: 301 LMSKM 305
++ M
Sbjct: 418 VLEVM 422
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 110/219 (50%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I LC++ + A +L +M+ KRI P+ VT+ L+ G C G+ EA L+ M
Sbjct: 224 YNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME 283
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P + + IL+ L K G++ EAK +L M K KPDVV Y+ L++ C V
Sbjct: 284 YRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVP 343
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A + M P+ +Y +MI+G C+I+ D LN+ M P T+ ++
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMV 403
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 220
GL K G + A ++ M + L + +LL LC
Sbjct: 404 AGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 106/228 (46%)
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
+ + +A +F+ M D SYS +I L K + D + + + N+
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
+ LI K+G + A ++ +++ S + + ++L++ L N ++ A S K
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+ P+ ++ IL+ G + A +VF ++L V TY +I LC++
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+A +L+ M P+AVT+ +++ L +G+ ++A+KL+ M RG
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +++ LC + V +AY + +EM K P+ TY +I GFC + + +LN M
Sbjct: 328 IYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM 387
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
+ P TF +V L K G + A VL VM K + +L+ C+
Sbjct: 388 LASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCI 443
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 153/290 (52%), Gaps = 8/290 (2%)
Query: 11 KDKLVNDAYNLYSEMLA-KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS---IN 66
K ++DA +L++ + A RI D+ + +++ + + + + V L Q ++KS
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLF-QHILKSQPNFR 119
Query: 67 PDVYTFSILVDALCK--EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
P TF IL+ C+ + + VL +M+ G +PD VT + C V++A+
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSLIDG 183
D+ +T PD +Y+ ++ LCK K + +M + ++ PD+V+++ LID
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
+C S + +A LV+++ + G P+ Y++++ C A+ + KKMK +G+ PD
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
TY L+ GL K GR+++A+ + ++ GY D TYT ++NG+C+ G
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 132/273 (48%), Gaps = 12/273 (4%)
Query: 81 KEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME--LAP 137
K + +AK++ + P D+ ++S++ Y + VN +F + + + P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 138 DVQSYSIMINGLCK-----IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
++ I+++ C+ I V LNL M + PD VT + LC++GR+ +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPDVYTYTILL 251
A +L+ E+ + PP+ TY+ LL LCK + + +M+ + PD+ ++TIL+
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
D +C L++A + L G+ D Y ++ G C EA+ + KM++ G
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 312 PDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
PD +TY +I+ L + G ++A L+ M+ G
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 99/184 (53%), Gaps = 1/184 (0%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK-S 64
+ SLC+ V++A +L E+ K PD TY L+ C L +++M
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+ PD+ +F+IL+D +C ++EA +++ + G KPD Y+++M G+C +++ ++A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
++ M + PD +Y+ +I GL K V++A K M PD TY+SL++G+
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 185 CKSG 188
C+ G
Sbjct: 346 CRKG 349
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +ID++C K + +A L S++ PD Y T++ GFC + + EAVG+ +M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
+ + PD T++ L+ L K G+V+EA+ L M+ G +PD TY+SLM+G C
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 114/230 (49%), Gaps = 8/230 (3%)
Query: 123 AEDIFNTMTRMELAP-DVQSYSIMINGLCKIKMVDDALNLFKQM--HTENITPDVVTYSS 179
A+ +FN++ P D++ ++ ++ I +V+D + LF+ + N P T+
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 180 LIDGLCKS--GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
L+ C++ IS+ ++N M + GL P+ +T + +LC+ VD A L+K++
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMINGLCKDGLF 295
+ PD YTY LL LCK L E F D + +++ D+ ++TI+I+ +C
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYE-FVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
EA+ L+SK+ + G PD Y I+ +A + ++M G+
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+TI+ C ++A +Y +M + + PD +TY TLI G G+++EA L M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 61 VVKSINPDVYTFSILVDALCKEG 83
V PD T++ L++ +C++G
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKG 349
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 140/268 (52%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y++++ +LC K+ + AY L M+ K + PD TY L++G+C G++KEA L++M
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ NP +L++ L G ++ AK +++ M KGG PD+ T++ L++ EV
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+++ T ++ L D+ +Y +I + KI +D+A L + P Y+ +
Sbjct: 304 EFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPI 363
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G+C++G DA+ ++M + PPN Y+ L+ + +A + + +M G+
Sbjct: 364 IKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGL 423
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
+P + ++ DGL GG+ A + Q
Sbjct: 424 VPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 147/300 (49%), Gaps = 5/300 (1%)
Query: 5 IIDSLCKDKLVNDAYNLYS---EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
II+ K+ V+ A L++ + L + + DV Y +L+ C V A L+ +M+
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV--YNSLLHALCDVKMFHGAYALIRRMI 209
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + PD T++ILV+ C GK+KEA+ L M + G P L++G +
Sbjct: 210 RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE 269
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+++ + MT+ PD+Q+++I+I + K V+ + ++ + D+ TY +LI
Sbjct: 270 SAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLI 329
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ K G+I +A+ L+N G P Y+ ++ +C+N D+A S MK +
Sbjct: 330 PAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ YT+L+ +GG+ DA ++ G R + ++ +GL G D A+ +
Sbjct: 390 PNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 159/339 (46%), Gaps = 7/339 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVV--TYTTLISGFCIVGQLKEAVGLLNQ 59
Y + SL K + + +M K +S D+ T +I + G + +AV L N
Sbjct: 114 YEELAKSLASHKKYESMWKILKQM--KDLSLDISGETLCFIIEQYGKNGHVDQAVELFNG 171
Query: 60 MVVKSI--NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
V K++ V ++ L+ ALC A ++ MI+ G KPD TY+ L++G+C
Sbjct: 172 -VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSA 230
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
++ +A++ + M+R P + ++I GL ++ A + +M PD+ T+
Sbjct: 231 GKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTF 290
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ LI+ + KSG + E+ GL ++ TY +L+ A+ K +D A L+
Sbjct: 291 NILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVE 350
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
G P Y ++ G+C+ G DA F D+ +K + + YT++I + G F +
Sbjct: 351 DGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVD 410
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
A + +M + G P + ++++ L G +D A ++
Sbjct: 411 AANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 146/317 (46%), Gaps = 1/317 (0%)
Query: 31 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKN 90
+P + Y L + + +L QM S++ T +++ K G V +A
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 91 VLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
+ + K G + V Y+SL+ C V + A + M R L PD ++Y+I++NG
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
C + +A +M P LI+GL +G + A E+V++M G P++
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
T++ L++A+ K+ V+ I + G+ D+ TY L+ + K G++ +A + +
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+ G+ Y +I G+C++G+FD+A + S M+ P+ Y ++I + G
Sbjct: 348 CVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGK 407
Query: 330 NDKAEKLLRQMIARGLL 346
A L +M GL+
Sbjct: 408 FVDAANYLVEMTEMGLV 424
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 174/367 (47%), Gaps = 48/367 (13%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+++I+ S K V+DA L EM + PD+VT+ +L+SG+ G K+A+ +L +M
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + P + S L+ A+ + G +K K + +++ DV ++L+D Y +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F+ M A ++ +++ +++GL ++ DA L +M E I PD +T++SL
Sbjct: 278 YARMVFDMMD----AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G G+ A +++ +M +G+ PNV++++++ KN + NA+ + KM+ +G+
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 242 P-----------------------------------DVYTYTILLDGLCKGGRLKDAQEV 266
P D Y T L+D K G L+ A E+
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII----- 321
F + N + ++ M+ G G +E +A S M + G PDA+T+ ++
Sbjct: 454 FWGI----KNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKN 509
Query: 322 YALFQEG 328
L QEG
Sbjct: 510 SGLVQEG 516
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 8/298 (2%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 107
G ++AV L +M T L+ + E + + +++ G + +V
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 108 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+SL+ Y ++ + +FN+M L+ S++ +++ K+ VDDA+ L +M
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ PD+VT++SL+ G G DA ++ M GL P+ + SSLL A+ + H+
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
++ + + DVY T L+D K G L A+ VF + K ++ + +++
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVS 299
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
GL L +A ALM +ME G PDA+T+ + G +KA ++ +M +G+
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 44/322 (13%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+++++ L L+ DA L M + I PD +T+ +L SG+ +G+ ++A+ ++ +M
Sbjct: 294 WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM---------- 111
K + P+V +++ + K G + A V M + G P+ T S+L+
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 413
Query: 112 -----DGYCL--------------------VNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
G+CL ++ A +IF + LA S++ M+
Sbjct: 414 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCML 469
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GL 205
G ++ + F M + PD +T++S++ SG + + W+ + M SR G+
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 529
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P + S ++D L ++ ++D A I+ M + PD + L CK R + E
Sbjct: 530 IPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS---LKPDATIWGAFLSS-CKIHRDLELAE 585
Query: 266 VFQDLLIKGYNLDVRTYTIMIN 287
+ L + Y +MIN
Sbjct: 586 IAWKRLQVLEPHNSANYMMMIN 607
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 175/343 (51%), Gaps = 4/343 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YST+I S K+ + + A + +M R+S D+V Y+ LI + +A+ + +++
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I PD+ ++ +++ K +EA+ ++ M + G P+ V+YS+L+ Y ++
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F M + A D+ + +IMI+ ++ MV +A LF + +I P+VV+Y++++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
++ +A L M + + NV+TY++++ K + A +L+++M+ +GI
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ TY+ ++ K G+L A +FQ L G +D Y MI + GL A L
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 492
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+ +++ PD + E I L + G ++A + RQ G
Sbjct: 493 LHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESG 531
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 156/317 (49%)
Query: 29 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEA 88
+ +P V Y ++ Q A GL ++M +++ PD YT+S L+ + KEG A
Sbjct: 150 KYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSA 209
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 148
+ L M + D+V YS+L++ + + +KA IF+ + R + PD+ +Y+ MIN
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 149 LCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 208
K K+ +A L K+M+ + P+ V+YS+L+ ++ + +A + EM +
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
Query: 209 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
+ T + ++D + V A L ++ I P+V +Y +L + +A +F+
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 269 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
+ K +V TY MI K ++A L+ +M+ G P+A+TY II + G
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 329 DNDKAEKLLRQMIARGL 345
D+A L +++ + G+
Sbjct: 450 KLDRAATLFQKLRSSGV 466
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 179/354 (50%), Gaps = 21/354 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTL---ISGFCIVGQLKEAVGLLN 58
Y ++I L K + + A+ L EM ++ SP +V TL I +C V + +A+ +
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFH 221
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGYC-L 116
+ + F L+ ALC+ V +A ++ + + P D +++ +++G+C +
Sbjct: 222 AYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHL--IFCNKDKYPFDAKSFNIVLNGWCNV 279
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
+ +AE ++ M + + DV SYS MI+ K ++ L LF +M E I PD
Sbjct: 280 IGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKV 339
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
Y++++ L K+ +S+A L+ M +G+ PNV+TY+SL+ LCK + A + +M
Sbjct: 340 YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM 399
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK----GYNLDVRTYTIMINGLCK 291
+G+ P + TY + L G +EVF+ LL K G V TY ++I LC+
Sbjct: 400 LEKGLFPTIRTYHAFMRILRTG------EEVFE-LLAKMRKMGCEPTVETYIMLIRKLCR 452
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
FD L L +M++ PD +Y ++I+ LF G ++A ++M +G+
Sbjct: 453 WRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS++I K +N L+ M + I PD Y ++ + EA L+ M
Sbjct: 305 YSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTME 364
Query: 62 V-KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K I P+V T++ L+ LCK K +EAK V M++ G P + TY + M +
Sbjct: 365 EEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM------RIL 418
Query: 121 NKAEDIFN---TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
E++F M +M P V++Y ++I LC+ + D+ L L+ +M + + PD+ +Y
Sbjct: 419 RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSY 478
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPN 208
+I GL +G+I +A+ EM +G+ PN
Sbjct: 479 IVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 185/342 (54%), Gaps = 7/342 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I S CK+ + +A +++ ML + P+VV++ +I G C G ++ A+ LL +M
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 62 VKS---INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+ S ++P+ T++ +++ CK G++ A+ + M+K G + TY +L+D Y
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG 340
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
++A + + MT L + Y+ ++ L ++ A+++ + M+++N+ D T +
Sbjct: 341 SSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA 400
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
++ GLC++G + +A E ++ + L +++ +++L+ ++ + A ++ M Q
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
G+ D ++ L+DG K G+L+ A E++ ++ ++ Y ++NGL K G+ A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
A+++ ME D VTY ++ + G+ ++A+ +L +M
Sbjct: 521 EAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 148/277 (53%), Gaps = 3/277 (1%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
+V TF++++ + CKE K+ EA +V M+K G P+VV+++ ++DG C ++ A +
Sbjct: 217 NVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL 276
Query: 128 NTMTRME---LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
M M ++P+ +Y+ +ING CK +D A + M + + TY +L+D
Sbjct: 277 GKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAY 336
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
++G +A L +EM S+GL N + Y+S++ L ++ A+S+++ M + + D
Sbjct: 337 GRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDR 396
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
+T I++ GLC+ G +K+A E + + K D+ + +++ +D A ++
Sbjct: 397 FTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGS 456
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
M G + DA+++ +I +EG ++A ++ MI
Sbjct: 457 MLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMI 493
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 158/318 (49%), Gaps = 5/318 (1%)
Query: 31 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKN 90
SPDV + +L+ G + A ++ Q + V+ + + L ++
Sbjct: 147 SPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWK 204
Query: 91 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 150
V M G +V T++ ++ +C +++ +A +F M + + P+V S+++MI+G C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 151 KIKMVDDALNLFKQMHTEN---ITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
K + AL L +M + ++P+ VTY+S+I+G CK+GR+ A + +M G+
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
N TY +L+DA + D A+ L +M +G++ + Y ++ L G ++ A V
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
+D+ K +D T I++ GLC++G EA+ ++ + D V + +++ ++
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRD 444
Query: 328 GDNDKAEKLLRQMIARGL 345
A+++L M+ +GL
Sbjct: 445 KKLACADQILGSMLVQGL 462
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 55 GLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 114
GL+ +PDV F LV A + G + A V+ G V ++ M
Sbjct: 136 GLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCL 193
Query: 115 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
VNE+++ ++ M + +V +++++I CK + +AL++F +M + P+V
Sbjct: 194 LNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNV 253
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEM---HSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
V+++ +IDG CK+G + A +L+ +M + PN +TY+S+++ CK
Sbjct: 254 VSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCK---------- 303
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
GRL A+ + D++ G + + RTY +++ +
Sbjct: 304 -------------------------AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGR 338
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G DEAL L +M G + V Y I+Y LF EGD + A +LR M ++ +
Sbjct: 339 AGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNM 392
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 144/276 (52%), Gaps = 6/276 (2%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y++I+ L + + A ++ +M +K + D T ++ G C G +KEAV Q+
Sbjct: 363 IYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQI 422
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + D+ + L+ ++ K+ A +L M+ G D +++ +L+DGY ++
Sbjct: 423 SEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKL 482
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A +I++ M +M ++ Y+ ++NGL K M A + M + D+VTY++L
Sbjct: 483 ERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTL 538
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNV--ITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
++ K+G + +A +++++M + +V +T++ +++ LCK + A ++K M +
Sbjct: 539 LNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVER 598
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
G++PD TY L+ K + E+ L+++G
Sbjct: 599 GVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQG 634
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 9/340 (2%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+N A + +M K + D + LI + G ++E+V + +M + + +++
Sbjct: 166 LNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNS 225
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L + + G+ AK M+ G +P TY+ ++ G+ L + A F M
Sbjct: 226 LFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG 285
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
++PD +++ MING C+ K +D+A LF +M I P VV+Y+++I G R+ D
Sbjct: 286 ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGL 345
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP-DVYTYTILLDG 253
+ EM S G+ PN TYS+LL LC + A +++K M + I P D + LL
Sbjct: 346 RIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVS 405
Query: 254 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM-------- 305
K G + A EV + + + Y ++I CK ++ A+ L+ +
Sbjct: 406 QSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR 465
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ + Y II L G KAE L RQ++ RG+
Sbjct: 466 HQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV 505
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 178/388 (45%), Gaps = 45/388 (11%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
M+ +I+S K +V ++ ++ +M + + +Y +L G+ A N+M
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + + P +T+++++ +++ A M G PD T++++++G+C ++
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++AE +F M ++ P V SY+ MI G + VDD L +F++M + I P+ TYS+L
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Query: 181 IDGLC------------------------------------KSGRISDAWELVNEMHSRG 204
+ GLC K+G ++ A E++ M +
Sbjct: 367 LPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLN 426
Query: 205 LPPNVITYSSLLDALCKNHHVDNAI----SLIKK---MKHQGILP-DVYTYTILLDGLCK 256
+P Y L++ CK + AI +LI+K ++HQ L + Y +++ LC
Sbjct: 427 VPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCN 486
Query: 257 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
G+ A+ +F+ L+ +G D +I G K+G D + ++ M G ++
Sbjct: 487 NGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNA 545
Query: 317 YEIIIYALFQEGDNDKAEKLLRQMIARG 344
YE++I + +G+ A+ L M+ G
Sbjct: 546 YELLIKSYMSKGEPGDAKTALDSMVEDG 573
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 167/382 (43%), Gaps = 50/382 (13%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+I+ C+ K +++A L+ EM +I P VV+YTT+I G+ V ++ + + + +M
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI--------------------KGGE- 100
I P+ T+S L+ LC GK+ EAKN+L M+ K G+
Sbjct: 353 SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDM 412
Query: 101 ---------------KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME--------LAP 137
+ Y L++ C + N+A + +T+ E L
Sbjct: 413 AAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEM 472
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
+ +Y+ +I LC A LF+Q+ + D ++LI G K G ++E++
Sbjct: 473 EPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEIL 531
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
M RG+P Y L+ + +A + + M G +PD + +++ L +
Sbjct: 532 KIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFED 591
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTI--MINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
GR++ A V ++ K ++ I ++ L G +EAL + + NG T D
Sbjct: 592 GRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD-- 649
Query: 316 TYEIIIYALFQEGDNDKAEKLL 337
+ ++ L ++G A KLL
Sbjct: 650 -LDSLLSVLSEKGKTIAALKLL 670
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 147/388 (37%), Gaps = 84/388 (21%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISP----------------------------- 32
YST++ LC + +A N+ M+AK I+P
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAM 422
Query: 33 -------DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI----------NPDVYTFSIL 75
+ Y LI C A+ LL+ ++ K I P Y + +
Sbjct: 423 ATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY--NPI 480
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
++ LC G+ +A+ + ++K G + D ++L+ G+ + + +I M+R +
Sbjct: 481 IEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGV 539
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
+ +Y ++I DA M + PD + S+I+ L + GR+ A
Sbjct: 540 PRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASR 599
Query: 196 LVNEMHSR--GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV--------- 244
++ M + G+ N+ + +L+AL HV+ A+ I + G D+
Sbjct: 600 VMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSE 659
Query: 245 -----------------------YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 281
+Y +LD L G+ +A V ++ KG + D ++
Sbjct: 660 KGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKS 719
Query: 282 YTIMINGLCKDGLFDEALALMSKMEDNG 309
+I L ++G +A ++S+M G
Sbjct: 720 SDELIKSLNQEGNTKQA-DVLSRMIKKG 746
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 149/278 (53%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
D +T++ +V L + + +L M++ G +P+ VTY+ L+ Y N +N+A ++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
N M PD +Y +I+ K +D A++++++M ++PD TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
G + A +L EM +G PN++TY+ ++D K + NA+ L + M++ G PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+I+++ L G L++A+ VF ++ K + D Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G P+ T ++ + +A +LL+ M+A GL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I S + +N+A N++++M PD VTY TLI G L A+ + +M
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++PD +T+S++++ L K G + A + M+ G P++VTY+ +MD +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ M PD +YSI++ L +++A +F +M +N PD Y L+
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K+G + AW+ M GL PNV T +SLL + + + A L++ M G+
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 242 PDVYTYTILLDGLCKGGRLK 261
P + TYT+LL C GR K
Sbjct: 642 PSLQTYTLLLS-CCTDGRSK 660
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 1/292 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ +L + K L EM+ P+ VTY LI + L EA+ + NQM
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD T+ L+D K G + A ++ M GG PD TYS +++ +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F M P++ +Y+IM++ K + +AL L++ M PD VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ L G + +A + EM + P+ Y L+D K +V+ A + M H G+
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
P+V T LL + ++ +A E+ Q++L G ++TYT++++ C DG
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 148/289 (51%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D TYTT++ Q LL++MV P+ T++ L+ + + + EA NV
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
M + G KPD VTY +L+D + ++ A D++ M L+PD +YS++IN L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
+ A LF +M + TP++VTY+ ++D K+ +A +L +M + G P+ +TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
S +++ L +++ A ++ +M+ + +PD Y +L+D K G ++ A + +Q +L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
G +V T +++ + EA L+ M G P TY +++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 128/247 (51%)
Query: 99 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
G K D TY++++ + + + M R P+ +Y+ +I+ + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
+N+F QM PD VTY +LID K+G + A ++ M + GL P+ TYS +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 219 LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
L K H+ A L +M QG P++ TY I++D K ++A ++++D+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
TY+I++ L G +EA A+ ++M+ PD Y +++ + G+ +KA + +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 339 QMIARGL 345
M+ GL
Sbjct: 599 AMLHAGL 605
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 227 NAISLIKKMKHQ-GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
NA+ +K Q G D +TYT ++ L + + ++ +++ G + TY +
Sbjct: 346 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
I+ + +EA+ + ++M++ GC PD VTY +I + G D A + ++M A GL
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 149/278 (53%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
D +T++ +V L + + +L M++ G +P+ VTY+ L+ Y N +N+A ++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
N M PD +Y +I+ K +D A++++++M ++PD TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
G + A +L EM +G PN++TY+ ++D K + NA+ L + M++ G PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+I+++ L G L++A+ VF ++ K + D Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G P+ T ++ + +A +LL+ M+A GL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I S + +N+A N++++M PD VTY TLI G L A+ + +M
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++PD +T+S++++ L K G + A + M+ G P++VTY+ +MD +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ M PD +YSI++ L +++A +F +M +N PD Y L+
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K+G + AW+ M GL PNV T +SLL + + + A L++ M G+
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 242 PDVYTYTILLDGLCKGGRLK 261
P + TYT+LL C GR K
Sbjct: 642 PSLQTYTLLLS-CCTDGRSK 660
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 1/292 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ +L + K L EM+ P+ VTY LI + L EA+ + NQM
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD T+ L+D K G + A ++ M GG PD TYS +++ +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F M P++ +Y+IM++ K + +AL L++ M PD VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ L G + +A + EM + P+ Y L+D K +V+ A + M H G+
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
P+V T LL + ++ +A E+ Q++L G ++TYT++++ C DG
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 148/289 (51%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D TYTT++ Q LL++MV P+ T++ L+ + + + EA NV
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
M + G KPD VTY +L+D + ++ A D++ M L+PD +YS++IN L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
+ A LF +M + TP++VTY+ ++D K+ +A +L +M + G P+ +TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
S +++ L +++ A ++ +M+ + +PD Y +L+D K G ++ A + +Q +L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
G +V T +++ + EA L+ M G P TY +++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 128/247 (51%)
Query: 99 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
G K D TY++++ + + + M R P+ +Y+ +I+ + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
+N+F QM PD VTY +LID K+G + A ++ M + GL P+ TYS +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 219 LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
L K H+ A L +M QG P++ TY I++D K ++A ++++D+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
TY+I++ L G +EA A+ ++M+ PD Y +++ + G+ +KA + +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 339 QMIARGL 345
M+ GL
Sbjct: 599 AMLHAGL 605
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 227 NAISLIKKMKHQ-GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
NA+ +K Q G D +TYT ++ L + + ++ +++ G + TY +
Sbjct: 346 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
I+ + +EA+ + ++M++ GC PD VTY +I + G D A + ++M A GL
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 149/278 (53%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
D +T++ +V L + + +L M++ G +P+ VTY+ L+ Y N +N+A ++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
N M PD +Y +I+ K +D A++++++M ++PD TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
G + A +L EM +G PN++TY+ ++D K + NA+ L + M++ G PD TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+I+++ L G L++A+ VF ++ K + D Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G P+ T ++ + +A +LL+ M+A GL
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 1/260 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I S + +N+A N++++M PD VTY TLI G L A+ + +M
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++PD +T+S++++ L K G + A + M+ G P++VTY+ +MD +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ M PD +YSI++ L +++A +F +M +N PD Y L+
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K+G + AW+ M GL PNV T +SLL + + + A L++ M G+
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR 641
Query: 242 PDVYTYTILLDGLCKGGRLK 261
P + TYT+LL C GR K
Sbjct: 642 PSLQTYTLLLS-CCTDGRSK 660
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 141/292 (48%), Gaps = 1/292 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ +L + K L EM+ P+ VTY LI + L EA+ + NQM
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD T+ L+D K G + A ++ M GG PD TYS +++ +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F M P++ +Y+IM++ K + +AL L++ M PD VTYS ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ L G + +A + EM + P+ Y L+D K +V+ A + M H G+
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
P+V T LL + ++ +A E+ Q++L G ++TYT++++ C DG
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDG 657
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 148/289 (51%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D TYTT++ Q LL++MV P+ T++ L+ + + + EA NV
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
M + G KPD VTY +L+D + ++ A D++ M L+PD +YS++IN L K
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
+ A LF +M + TP++VTY+ ++D K+ +A +L +M + G P+ +TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
S +++ L +++ A ++ +M+ + +PD Y +L+D K G ++ A + +Q +L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
G +V T +++ + EA L+ M G P TY +++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 128/247 (51%)
Query: 99 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
G K D TY++++ + + + M R P+ +Y+ +I+ + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
+N+F QM PD VTY +LID K+G + A ++ M + GL P+ TYS +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 219 LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
L K H+ A L +M QG P++ TY I++D K ++A ++++D+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
TY+I++ L G +EA A+ ++M+ PD Y +++ + G+ +KA + +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 339 QMIARGL 345
M+ GL
Sbjct: 599 AMLHAGL 605
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 227 NAISLIKKMKHQ-GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
NA+ +K Q G D +TYT ++ L + + ++ +++ G + TY +
Sbjct: 346 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
I+ + +EA+ + ++M++ GC PD VTY +I + G D A + ++M A GL
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 137/263 (52%), Gaps = 2/263 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEML-AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ T+I LCKD V +A + +ML + P V Y +LI C +G+L A L ++
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I D +S L+ +L K G+ E +L M + G KPD VTY+ L++G+C+ N+
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A + + M L PDV SY++++ +IK ++A LF+ M +PD ++Y +
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
DGLC+ + +A +++EM +G P L LC++ ++ +I + H+GI
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGI 428
Query: 241 LPDVYTYTILLDGLCKGGRLKDA 263
D +++++ +CK + D+
Sbjct: 429 AGDADVWSVMIPTMCKEPVISDS 451
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 146/306 (47%), Gaps = 35/306 (11%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
PD TY LI G G +A+ L ++MV K + P TF L+ LCK+ +VKEA +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 92 LAVMIK-GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 150
M+K G +P V Y+SL+ C + E++ A + + ++ D YS +I+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
K ++ + ++M + PD VTY+ LI+G C A +++EM +GL P+VI
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
+Y+ +L + + A L + M +G PD +Y I+ DGLC+G + ++A + ++
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 271 LIKGYNL----------------------------------DVRTYTIMINGLCKDGLFD 296
L KGY D +++MI +CK+ +
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVIS 449
Query: 297 EALALM 302
+++ L+
Sbjct: 450 DSIDLL 455
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 169/329 (51%), Gaps = 2/329 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ +I+ + KL + A +++ EM R V + +L+S G+L++ L+
Sbjct: 85 IFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSS- 143
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + PD T++IL+ + G +A + M+K KP VT+ +L+ G C + V
Sbjct: 144 IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 121 NKAEDIFNTMTRM-ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+A + + M ++ + P V Y+ +I LC+I + A L + + I D YS+
Sbjct: 204 KEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYST 263
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LI L K+GR ++ ++ EM +G P+ +TY+ L++ C + ++A ++ +M +G
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ PDV +Y ++L + + ++A +F+D+ +G + D +Y I+ +GLC+ F+EA
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAA 383
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
++ +M G P E + L + G
Sbjct: 384 VILDEMLFKGYKPRRDRLEGFLQKLCESG 412
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 161/317 (50%), Gaps = 2/317 (0%)
Query: 29 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEA 88
RI P + + +I+ F A+ + ++M V + + L+ AL K G++++
Sbjct: 78 RIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKM 137
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 148
K L+ + + G KPD TY+ L+ G + A +F+ M + ++ P ++ +I+G
Sbjct: 138 KERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHG 196
Query: 149 LCKIKMVDDALNLFKQM-HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
LCK V +AL + M + P V Y+SLI LC+ G +S A++L +E + +
Sbjct: 197 LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV 256
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+ YS+L+ +L K + ++++M +G PD TY +L++G C + A V
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
+++ KG DV +Y +++ + ++EA L M GC+PD ++Y I+ L +
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 328 GDNDKAEKLLRQMIARG 344
++A +L +M+ +G
Sbjct: 377 LQFEEAAVILDEMLFKG 393
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 122/232 (52%), Gaps = 1/232 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+++I +LC+ ++ A+ L E +I D Y+TLIS G+ E +L +M
Sbjct: 225 IYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEM 284
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K PD T+++L++ C E + A VL M++ G KPDV++Y+ ++ + + +
Sbjct: 285 SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKW 344
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A +F M R +PD SY I+ +GLC+ ++A + +M + P
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGF 404
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
+ LC+SG++ ++++ +H RG+ + +S ++ +CK + ++I L+
Sbjct: 405 LQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPVISDSIDLL 455
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 172 PDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
PD TY+ LI G +SG DA +L +EM + + P +T+ +L+ LCK+ V A+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL-- 207
Query: 232 IKKMKHQ-----GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
KMKH G+ P V+ Y L+ LC+ G L A ++ + +D Y+ +I
Sbjct: 208 --KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLI 265
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ L K G +E ++ +M + GC PD VTY ++I E D++ A ++L +M+ +GL
Sbjct: 266 SSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 150/309 (48%), Gaps = 3/309 (0%)
Query: 36 TYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALC-KEGK-VKEAKNVLA 93
T+ +I + G A+ +M + P TF L+ LC K+G+ V+EA
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 94 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 153
MI+ G PD + C V A+ +++ ++ P +YSI I LC+I
Sbjct: 775 EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIG 833
Query: 154 MVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 213
+++AL+ E D TY S++ GL + G + A + VN M G P V Y+
Sbjct: 834 KLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYT 893
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
SL+ K ++ + +KM+ + P V TYT ++ G G++++A F+++ +
Sbjct: 894 SLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEER 953
Query: 274 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
G + D +TY+ IN LC+ ++AL L+S+M D G P + + + Y L +EG +D A
Sbjct: 954 GTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Query: 334 EKLLRQMIA 342
L++ A
Sbjct: 1014 RIALQKKSA 1022
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 150/331 (45%), Gaps = 1/331 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I K K + ++ +M D Y +I CI G+ A+ +M+
Sbjct: 227 WTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMM 286
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I + T+ +L+D + K KV +++ M++ E + + L+ +C+ ++
Sbjct: 287 EKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIK 346
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++ + E+ D + + I++ GLC+ + DAL + M + D Y +I
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIII 405
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G + +S A E + G PP V TY+ ++ L K + +L +M GI
Sbjct: 406 SGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIE 465
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD T ++ G R+ +A +VF + KG ++Y+I + LC+ +DE + +
Sbjct: 466 PDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKI 525
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
++M + + +I ++ + G+ +K
Sbjct: 526 FNQMHASKIVIRDDIFSWVISSMEKNGEKEK 556
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 7/262 (2%)
Query: 2 YSTIIDSLC--KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+ +I LC K + V +A + EM+ PD + C VG K+A L+
Sbjct: 751 FKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDS 810
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP--DVVTYSSLMDGYCLV 117
+ K P +SI + ALC+ GK++EA + LA GE+ D TY S++ G
Sbjct: 811 L-GKIGFPVTVAYSIYIRALCRIGKLEEALSELASF--EGERSLLDQYTYGSIVHGLLQR 867
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
++ KA D N+M + P V Y+ +I K K ++ L ++M E+ P VVTY
Sbjct: 868 GDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+++I G G++ +AW M RG P+ TYS ++ LC+ ++A+ L+ +M
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 238 QGILPDVYTYTILLDGLCKGGR 259
+GI P + + GL + G+
Sbjct: 988 KGIAPSTINFRTVFYGLNREGK 1009
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
P V Y+ I C +G+L+EA+ L + D YT+ +V L + G +++A +
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDK 876
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
+ M + G KP V Y+SL+ + ++ K + M P V +Y+ MI G
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
+ V++A N F+ M +PD TYS I+ LC++ + DA +L++EM +G+ P+ I
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTIN 996
Query: 212 YSSLLDALCKNHHVDNA-ISLIKK 234
+ ++ L + D A I+L KK
Sbjct: 997 FRTVFYGLNREGKHDLARIALQKK 1020
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 42/300 (14%)
Query: 87 EAKNV------LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 140
EA+N+ ++ M K G D+ T++ L+ Y ++ K +F M + D
Sbjct: 201 EARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDAT 260
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID------------------ 182
+Y+IMI LC D AL +K+M + IT + TY L+D
Sbjct: 261 AYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Query: 183 -----------------GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
C SG+I +A EL+ E+ ++ + + + L+ LC+ + +
Sbjct: 321 VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
+A+ ++ MK + L D Y I++ G + + A E F+ + G V TYT +
Sbjct: 381 VDALEIVDIMKRRK-LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI 439
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ L K F++ L ++M +NG PD+V ++ + +A K+ M +G+
Sbjct: 440 MQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 117/278 (42%), Gaps = 5/278 (1%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV--NEVNKAEDIFN 128
T++I++ + G A M G P T+ L+ C V +A F
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 129 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
M R PD + + LC++ DA + + P V YS I LC+ G
Sbjct: 775 EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIG 833
Query: 189 RISDAW-ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
++ +A EL + R L TY S++ L + + A+ + MK G P V+ Y
Sbjct: 834 KLEEALSELASFEGERSLLDQY-TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVY 892
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
T L+ K +L+ E Q + + V TYT MI G G +EA ME+
Sbjct: 893 TSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEE 952
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G +PD TY I L Q ++ A KLL +M+ +G+
Sbjct: 953 RGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Query: 94 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 153
V K G V Y++++ ++ +++ + M + D+++++I+I+ K K
Sbjct: 179 VKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAK 238
Query: 154 MVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 213
+ L +F++M D Y+ +I LC +GR A E EM +G+ + TY
Sbjct: 239 KIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYK 298
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
LLD + K+ VD S+ M + + + LL C G++K+A E+ ++L K
Sbjct: 299 MLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNK 358
Query: 274 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
LD + + I++ GLC+ +AL ++ M+ D+ Y III ++ D KA
Sbjct: 359 EMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK-LDDSNVYGIIISGYLRQNDVSKA 417
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ ++ LC+ + DA + +++ +R D Y +ISG+ + +A+ +
Sbjct: 367 FEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIK 425
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P V T++ ++ L K + ++ N+ MI+ G +PD V ++++ G+ N V
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVA 485
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +F++M + P +SYSI + LC+ D+ + +F QMH I +S +I
Sbjct: 486 EAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVI 545
Query: 182 DGLCKSGRISDAWELVNEMHSR 203
+ K+G + L+ E+ R
Sbjct: 546 SSMEKNGE-KEKIHLIKEIQKR 566
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 154/387 (39%), Gaps = 45/387 (11%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y II + V+ A + + P V TYT ++ + Q ++ L N+M
Sbjct: 400 VYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEM 459
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ I PD + +V + +V EA V + M + G KP +YS + C +
Sbjct: 460 IENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRY 519
Query: 121 NKAEDIFNTM-------------------------TRMELAPDVQ----SYSIMINGLCK 151
++ IFN M ++ L ++Q SY +NG K
Sbjct: 520 DEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGK 579
Query: 152 IK------MVDDALNLFKQMHTENITPDVVTYSSL-IDGLCKSGRISDAWELVNEMHSRG 204
+ +VDD N + + + P + + + +C+ S WE E +
Sbjct: 580 AEFSQEEELVDD-YNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKS 638
Query: 205 ---LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
P ++ L A + + V S + K + Y +I + G G K
Sbjct: 639 TVQFTPELVV-EVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGC--GKDFK 695
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
+ +F ++ +G + T+ IMI + GL + A+ +M+D G P + T++ +I
Sbjct: 696 QMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLI 755
Query: 322 YALFQ-EGDN-DKAEKLLRQMIARGLL 346
L + +G N ++A + R+MI G +
Sbjct: 756 TVLCEKKGRNVEEATRTFREMIRSGFV 782
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+++I K+K + +M + P VVTYT +I G+ +G+++EA M
Sbjct: 891 VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM 950
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 113
+ +PD T+S ++ LC+ K ++A +L+ M+ G P + + ++ G
Sbjct: 951 EERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYG 1003
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 6/311 (1%)
Query: 37 YTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 96
Y L+ F G+ K L+++M+ TF++L+ C G+ A++V+ I
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 97 KGGE---KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 153
K +P +Y++++ V + + ++ M PDV +Y+I++ ++
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 154 MVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 213
D L +M + +PD+ TY+ L+ L + A L+N M G+ P VI ++
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
+L+D L + ++ + + G PDV YT+++ G GG L+ A+E+F+++ K
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 274 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
G +V TY MI G C G F EA AL+ +ME GC P+ V Y ++ L G +A
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEA 451
Query: 334 EKLLRQMIARG 344
++++ M+ +G
Sbjct: 452 HEVVKDMVEKG 462
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 126/238 (52%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ I+ SL K +Y +ML +PDV+TY ++ +G+ LL++MV
Sbjct: 225 YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+PD+YT++IL+ L K A N+L M + G +P V+ +++L+DG ++
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + ++ PDV Y++MI G ++ A +FK+M + P+V TY+S+I
Sbjct: 345 ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMI 404
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
G C +G+ +A L+ EM SRG PN + YS+L++ L V A ++K M +G
Sbjct: 405 RGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 122/244 (50%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
P +Y ++ V Q K + QM+ PDV T++I++ A + GK +
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
L M+K G PD+ TY+ L+ N+ A ++ N M + + P V ++ +I+GL +
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
++ + TPDVV Y+ +I G G + A E+ EM +G PNV T
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
Y+S++ C A +L+K+M+ +G P+ Y+ L++ L G++ +A EV +D++
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Query: 272 IKGY 275
KG+
Sbjct: 460 EKGH 463
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 145/292 (49%), Gaps = 6/292 (2%)
Query: 21 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV-VKSIN--PDVYTFSILVD 77
L EM+ T+ LI C G+ A ++ Q + K+ N P ++++ ++
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
+L + K V M++ G PDV+TY+ +M + + ++ + + M + +P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
D+ +Y+I+++ L ALNL M + P V+ +++LIDGL ++G++ +
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
+E G P+V+ Y+ ++ ++ A + K+M +G LP+V+TY ++ G C
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
G+ K+A + +++ +G N + Y+ ++N L G EA ++ M + G
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL--CKSGRISDAWELVN 198
+++++I + + D + F + T N P +Y++++ L K ++ D W +
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLID-W-VYE 246
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
+M G P+V+TY+ ++ A + D L+ +M G PD+YTY ILL L G
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYE 318
+ A + + G V +T +I+GL + G + M + GCTPD V Y
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 319 IIIYALFQEGDNDKAEKLLRQMIARGLL 346
++I G+ +KAE++ ++M +G L
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQL 394
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
EN Y L+ + G L++EM G P T++ L+ + +
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARD 205
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
+ K K P ++Y +L L + K V++ +L G+ DV TY I++
Sbjct: 206 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMF 265
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ G D L+ +M +G +PD TY I+++ L A LL M G+
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 323
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 155/314 (49%), Gaps = 3/314 (0%)
Query: 34 VVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKE--AKNV 91
V Y ++ + G+ +A L++ M + PD+ +F+ L++A K G + A +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
L ++ G +PD +TY++L+ + ++ A +F M PD+ +Y+ MI+ +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
+ +A LF ++ + PD VTY+SL+ + E+ +M G + +T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKH-QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
Y++++ K +D A+ L K MK G PD TYT+L+D L K R +A + ++
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
L G ++TY+ +I G K G +EA S M +G PD + Y +++ L + +
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524
Query: 331 DKAEKLLRQMIARG 344
KA L R MI+ G
Sbjct: 525 RKAWGLYRDMISDG 538
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 136/279 (48%), Gaps = 1/279 (0%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
+ PD +TY TL+S L AV + M PD++T++ ++ + G EA+
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
+ + G PD VTY+SL+ + K ++++ M +M D +Y+ +I+
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 150 CKIKMVDDALNLFKQMHT-ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 208
K +D AL L+K M PD +TY+ LID L K+ R +A L++EM G+ P
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 209 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
+ TYS+L+ K + A M G PD Y+++LD L +G + A +++
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Query: 269 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
D++ G+ Y +MI GL K+ D+ + ME+
Sbjct: 533 DMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 167/343 (48%), Gaps = 3/343 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKE--AVGLLN 58
+Y+ ++ + + A L M + PD++++ TLI+ G L AV LL+
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+ + PD T++ L+ A ++ + A V M +PD+ TY++++ Y
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+AE +F + PD +Y+ ++ + + + +++QM D +TY+
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 179 SLIDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
++I K G++ A +L +M G P+ ITY+ L+D+L K + A +L+ +M
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
GI P + TY+ L+ G K G+ ++A++ F +L G D Y++M++ L + +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
A L M +G TP YE++I L +E +D +K +R M
Sbjct: 527 AWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 167/340 (49%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+ II++ K KL A ++ + +PD+ T+ +L+S + G + A + N M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ +P V + +IL+ ALC +G+++E V+ + G K + ++D + +
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ + I+++M P ++ Y +MI LCK K V DA + +M N ++ ++S+
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ ++ + GL P+ TY++L+ C++ + L+++M++ G+
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P + TY L+ K L+ A+++F++LL KG LD Y M+ G +A
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L+ M++ G P T +++ + G+ +AEK+L +
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 145/284 (51%), Gaps = 3/284 (1%)
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV--N 121
++ V ++ ++ + GK +A+ ++ M + G PD++++++L++ + N
Sbjct: 220 TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ + + L PD +Y+ +++ + +D A+ +F+ M PD+ TY+++I
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ G ++A L E+ +G P+ +TY+SLL A + + + + ++M+ G
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D TY ++ K G+L A ++++D+ + G N D TYT++I+ L K EA A
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
LMS+M D G P TY +I + G ++AE M+ G
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 165/381 (43%), Gaps = 36/381 (9%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY T++ ++ +A ++S++ +++ +C +G + A ++NQ
Sbjct: 683 MYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQA 742
Query: 61 VVKSINPDVYT-FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
K + ++ +++A K+ ++A++V+ + + G PD+ T++SLM Y
Sbjct: 743 ETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGC 802
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLC-------------------------KIKM 154
+A IFNTM R +P V+S +I+++ LC I +
Sbjct: 803 YERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL 862
Query: 155 VDDAL----NLFK------QMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+ DA N+F+ M P + Y +I+ LCK R+ DA +V+EM
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ ++S+L + + +++K G+ PD TY L+ C+ R ++
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
+ Q + G + + TY +I+ K ++A L ++ G D Y ++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 325 FQEGDNDKAEKLLRQMIARGL 345
G + KAEKLL+ M G+
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGI 1063
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 7/271 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y++++ + +++ +Y +M D +TY T+I + GQL A+ L M
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Query: 62 -VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ NPD T+++L+D+L K + EA +++ M+ G KP + TYS+L+ GY +
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+AED F+ M R PD +YS+M++ L + A L++ M ++ TP Y +
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 181 IDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
I GL K R D + + +M G+ P I+ L K D A +K G
Sbjct: 550 ILGLMKENRSDDIQKTIRDMEELCGMNPLEIS-----SVLVKGECFDLAARQLKVAITNG 604
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
+ T +L GR +A E+ + L
Sbjct: 605 YELENDTLLSILGSYSSSGRHSEAFELLEFL 635
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 92 LAVMIKGGEKP----DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
LAV I +P V Y+++M Y + +KA+++ + M + PD+ S++ +IN
Sbjct: 209 LAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN 268
Query: 148 GLCKIKMVDD--ALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
K + A+ L + + PD +TY++L+ + + A ++ +M +
Sbjct: 269 ARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC 328
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P++ TY++++ + A L +++ +G PD TY LL + + +E
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED-NGCTPDAVTYEIIIYAL 324
V+Q + G+ D TY +I+ K G D AL L M+ +G PDA+TY ++I +L
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 325 FQEGDNDKAEKLLRQMIARGL 345
+ +A L+ +M+ G+
Sbjct: 449 GKANRTVEAAALMSEMLDVGI 469
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 46/380 (12%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEM--LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
Y+TII K ++ A LY +M L+ R +PD +TYT LI + EA L+++
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGR-NPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M+ I P + T+S L+ K GK +EA++ + M++ G KPD + YS ++D NE
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
KA ++ M P Y +MI GL K DD + M + S
Sbjct: 524 TRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSV 583
Query: 180 LIDGLC-------------------------------KSGRISDAWELVNEMHSRGLPPN 208
L+ G C SGR S+A+EL+ +
Sbjct: 584 LVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSK 643
Query: 209 VITYSSLLDALCKNHHVDNAIS--LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
+ +L+ CK +++ A+ H Y LL +A +V
Sbjct: 644 RLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQV 703
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG----CTPDAVTYEIIIY 322
F DL + G M+ CK G + A ++++ E G C+P Y II
Sbjct: 704 FSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIE 760
Query: 323 ALFQEGDNDKAEKL---LRQ 339
A ++ KAE + LRQ
Sbjct: 761 AYGKQKLWQKAESVVGNLRQ 780
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 148/321 (46%), Gaps = 4/321 (1%)
Query: 5 IIDSLCKDKLVNDAYNLYSEM--LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
++ +LC D + + Y + E+ + +IS + ++ F G + E + + M
Sbjct: 828 LLHALCVDGRLEELYVVVEELQDMGFKISKSSILL--MLDAFARAGNIFEVKKIYSSMKA 885
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
P + + ++++ LCK +V++A+ +++ M + K ++ ++S++ Y + + K
Sbjct: 886 AGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKK 945
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
++ + L PD +Y+ +I C+ + ++ L +QM + P + TY SLI
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
K + A +L E+ S+GL + Y +++ + A L++ MK+ GI P
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+ T +L+ G ++A++V +L L Y+ +I+ + ++ + +
Sbjct: 1066 TLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERL 1125
Query: 303 SKMEDNGCTPDAVTYEIIIYA 323
+M+ G PD + + A
Sbjct: 1126 LEMKKEGLEPDHRIWTCFVRA 1146
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/305 (18%), Positives = 131/305 (42%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++D+ + + + +YS M A P + Y +I C ++++A ++++M +
Sbjct: 863 MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEAN 922
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
++ ++ ++ K+ V + + G +PD TY++L+ YC +
Sbjct: 923 FKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGY 982
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+ M + L P + +Y +I+ K K ++ A LF+++ ++ + D Y +++
Sbjct: 983 LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKIS 1042
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
SG S A +L+ M + G+ P + T L+ + + + A ++ +K +
Sbjct: 1043 RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTT 1102
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
Y+ ++D + E ++ +G D R +T + E + L+
Sbjct: 1103 LPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKA 1162
Query: 305 MEDNG 309
+ED G
Sbjct: 1163 LEDIG 1167
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I C+D+ + Y L +M + P + TY +LIS F L++A L +++
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + D + ++ G +A+ +L +M G +P + T LM Y
Sbjct: 1025 SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+AE + + + E+ YS +I+ + K + + +M E + PD ++ +
Sbjct: 1085 EAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y ++I + K K + A L+ E+L+K + D Y T++ G +A LL M
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I P + T +L+ + G +EA+ VL+ + + + YSS++D Y + N
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYN 1119
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMING 148
+ M + L PD + ++ +
Sbjct: 1120 SGIERLLEMKKEGLEPDHRIWTCFVRA 1146
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 162/317 (51%), Gaps = 2/317 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+I S K V+ + ++ +M + ++ T+ LI G GQ+ +A G +
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK--PDVVTYSSLMDGYCLVN 118
K++ PD F+ L+ A + G V A +VLA M PD ++ +LM C
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+V +A++++ + + + + Y+I +N K D A +++K M +++TPD V +S
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+LID + + +A+ ++ + S+G+ I+YSSL+ A C A+ L +K+K
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
+ P + T L+ LC+G +L A E ++ G + TY++++ + F+ +
Sbjct: 744 KLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVS 803
Query: 299 LALMSKMEDNGCTPDAV 315
L+S+ + +G +P+ +
Sbjct: 804 FKLLSQAKGDGVSPNLI 820
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 149/320 (46%), Gaps = 6/320 (1%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
++ D YTTLIS G++ + +QM + +++TF L+D + G+V +A
Sbjct: 498 MTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAF 557
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT--RMELAPDVQSYSIMIN 147
++ KPD V +++L+ V++A D+ M + PD S ++
Sbjct: 558 GAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMK 617
Query: 148 GLCKIKMVDDALNLFKQMHTENI--TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
C V+ A +++ +H I TP+V Y+ ++ KSG A + +M + +
Sbjct: 618 ACCNAGQVERAKEVYQMIHKYGIRGTPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDV 675
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P+ + +S+L+D +D A +++ K QGI +Y+ L+ C K A E
Sbjct: 676 TPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALE 735
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
+++ + + T +I LC+ +A+ + +++ G P+ +TY +++ A
Sbjct: 736 LYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASE 795
Query: 326 QEGDNDKAEKLLRQMIARGL 345
++ D + + KLL Q G+
Sbjct: 796 RKDDFEVSFKLLSQAKGDGV 815
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 157/347 (45%), Gaps = 8/347 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ-LKEAVGLLNQM 60
+++ + K + V +A+ +L +P + T+ L+S C Q ++ A G+L +
Sbjct: 439 HASFFKACKKQRAVKEAFRFTKLIL----NPTMSTFNMLMS-VCASSQDIEGARGVLRLV 493
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ D ++ L+ + K GKV V M G + ++ T+ +L+DG +V
Sbjct: 494 QESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQV 553
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN--ITPDVVTYS 178
KA + + + PD ++ +I+ + VD A ++ +M E I PD ++
Sbjct: 554 AKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIG 613
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+L+ C +G++ A E+ +H G+ Y+ +++ K+ D A S+ K MK +
Sbjct: 614 ALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK 673
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
+ PD ++ L+D L +A + QD +G L +Y+ ++ C + +A
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKA 733
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L L K++ P T +I AL + KA + L ++ GL
Sbjct: 734 LELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 86/197 (43%), Gaps = 5/197 (2%)
Query: 147 NGLCKIKMVDDALNLFKQMHTENITP-DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
N L + + D ++L + + ++ D + ++S K + +A+ + L
Sbjct: 408 NRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI----L 463
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P + T++ L+ + ++ A +++ ++ G+ D YT L+ K G++ E
Sbjct: 464 NPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
VF + G ++ T+ +I+G + G +A + PD V + +I A
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 326 QEGDNDKAEKLLRQMIA 342
Q G D+A +L +M A
Sbjct: 584 QSGAVDRAFDVLAEMKA 600
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 173/348 (49%), Gaps = 6/348 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ I+D L K + + + ++ EM + + TY L++ + ++ EAVG+ +
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I+ D+ F L+ LC+ V+ A+ + + D+ + +++G+C++ V
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREF-GCDIKAMNMILNGWCVLGNV 263
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A+ + + + PDV SY MIN L K + A+ L++ M PDV +++
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG- 239
ID LC RI +A E+ E+ +G PNV+TY+SLL LCK + L+++M+ +G
Sbjct: 324 IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
Query: 240 -ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
P+ T++ LL R KD V + + + Y +M + ++
Sbjct: 384 SCSPNDVTFSYLLK---YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKV 440
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+ S+ME +G PD TY I I+ L +G +A ++M+++G++
Sbjct: 441 REIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 34/209 (16%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y T+I++L K + A LY M R +PDV +I C ++ EA+ + ++
Sbjct: 285 YGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREIS 344
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM-IKGGE-KPDVVTYSSLM-------- 111
K +P+V T++ L+ LCK + ++ ++ M +KGG P+ VT+S L+
Sbjct: 345 EKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKD 404
Query: 112 -----------------DGYCLV-------NEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
D Y L+ ++ K +I++ M R L PD ++Y+I I+
Sbjct: 405 VDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIH 464
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVT 176
GL + +AL+ F++M ++ + P+ T
Sbjct: 465 GLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 146/278 (52%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
D +T++ +V L + + E +L M++ G KP+ VTY+ L+ Y N + +A ++F
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
N M PD +Y +I+ K +D A++++++M ++PD TYS +I+ L K+
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
G + A L EM +G PN++T++ ++ K + + A+ L + M++ G PD TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+I+++ L G L++A+ VF ++ K + D Y ++++ K G D+A M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G P+ T ++ + +A LL+ M+A GL
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 127/250 (50%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I S + + +A N++++M PD VTY TLI G L A+ + +M
Sbjct: 397 YNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++PD +T+S++++ L K G + A + M+ G P++VT++ ++ +
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 516
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ M PD +YSI++ L +++A +F +M +N PD Y L+
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D K+G + AW+ M GL PNV T +SLL + H + A +L++ M G+
Sbjct: 577 DLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLH 636
Query: 242 PDVYTYTILL 251
P + TYT+LL
Sbjct: 637 PSLQTYTLLL 646
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 145/289 (50%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D TYTT++ Q E LL++MV P+ T++ L+ + + +KEA NV
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
M + G +PD VTY +L+D + ++ A D++ M L+PD +YS++IN L K
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
+ A LF +M + TP++VT++ +I K+ A +L +M + G P+ +TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
S +++ L ++ A + +M+ + +PD Y +L+D K G + A + +Q +L
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
G +V T +++ + EA L+ M G P TY +++
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 1/291 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ +L + K + L EM+ P+ VTY LI + LKEA+ + NQM
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD T+ L+D K G + A ++ M + G PD TYS +++ +
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +F M P++ +++IMI K + + AL L++ M PD VTYS ++
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ L G + +A + EM + P+ Y L+D K +VD A + M G+
Sbjct: 542 EVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
P+V T LL + R+ +A + Q +L G + ++TYT++++ C D
Sbjct: 602 PNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCTD 651
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 124/247 (50%)
Query: 99 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
G K D TY++++ + + + + M R P+ +Y+ +I+ + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
+N+F QM PD VTY +LID K+G + A ++ M GL P+ TYS +++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 219 LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
L K H+ A L +M QG P++ T+ I++ K + A ++++D+ G+ D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
TY+I++ L G +EA + ++M+ PD Y +++ + G+ DKA + +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 339 QMIARGL 345
M+ GL
Sbjct: 594 AMLQAGL 600
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 227 NAISLIKKMKHQ-GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
NA+ +K Q G D +TYT ++ L + + + ++ +++ G + TY +
Sbjct: 341 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRL 400
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
I+ + EA+ + ++M++ GC PD VTY +I + G D A + ++M GL
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 169/344 (49%), Gaps = 2/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y++++ L K + ++ EM K + + T+T + F + K+AVG+ M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V T + L+D+L + KEA+ VL +K P+++TY+ L++G+C V +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I+N M L PD+ ++++M+ GL + + DA+ LF M ++ P+V +Y+ +I
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
CK + A E ++M GL P+ Y+ L+ +D L+K+M+ +G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY L+ + + A ++ ++ + T+ +++ ++ A+
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV 495
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G PD +Y ++I L EG + +A + L +M+ +G+
Sbjct: 496 WEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 144/289 (49%), Gaps = 1/289 (0%)
Query: 51 KEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 110
KEA L +++ + P++ T+++L++ C+ + EA + MI G KPD+V ++ +
Sbjct: 281 KEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVM 339
Query: 111 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 170
++G + + A +F+ M P+V+SY+IMI CK ++ A+ F M +
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 171 TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 230
PD Y+ LI G ++ +EL+ EM +G PP+ TY++L+ + ++A
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATR 459
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
+ KM I P ++T+ +++ + + V+++++ KG D +YT++I GL
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLI 519
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
+G EA + +M D G + Y + G + E+L ++
Sbjct: 520 GEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 4/203 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I CK + A + +M+ + PD YT LI+GF +L LL +M
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K PD T++ L+ + + + A + MI+ +P + T++ +M Y +
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYE 490
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
++ M + + PD SY+++I GL +A ++M + + ++ Y+
Sbjct: 491 MGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 182 DGLCKSGRISDAWELVNEMHSRG 204
+ G+ E+ E+ R
Sbjct: 551 ADFHRGGQP----EIFEELAQRA 569
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ D TY+S++ L K+ + ++ EM ++GL + T++ + A
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 247
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A+ + + MK V T LLD L + K+AQ +F D L + + ++ TYT+++N
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF-DKLKERFTPNMMTYTVLLN 306
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
G C+ EA + + M D G PD V + +++ L + A KL M ++G
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKG 363
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I K ++ Y L EM K PD TY LI + A + N+M
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM 464
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 113
+ I P ++TF++++ + + + V MIK G PD +Y+ L+ G
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 1/332 (0%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
+DS + V A L+ E + + ++ L+ C + A + N +I
Sbjct: 193 MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-GNI 251
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
D +++I++ K G+V+E + VL M++ G PD ++YS L++G +N + +
Sbjct: 252 PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE 311
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
IF+ + PD Y+ MI + D+++ +++M E P++ TYS L+ GL
Sbjct: 312 IFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
K ++SDA E+ EM SRG+ P +S L LC A+ + +K + G
Sbjct: 372 KGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISES 431
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
Y +LL L + G+ V+ ++ GY DV Y +++GLC G + A+ +M +
Sbjct: 432 AYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEA 491
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
G P+ Y + L + A KL
Sbjct: 492 MRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 156/345 (45%), Gaps = 3/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS I+ +L + KL + ++ M+ + ++PD+ T + F V ++ A+ L +
Sbjct: 154 YSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGYCLVNEV 120
+ +F+ L+ LC+ V AK+V K G P D +Y+ ++ G+ + EV
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ E + M PD SYS +I GL + ++D++ +F + + PD Y+++
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I + ++ M PN+ TYS L+ L K V +A+ + ++M +G+
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
LP T L LC G A ++Q G + Y +++ L + G L
Sbjct: 392 LPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLN 451
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M+++G D YE I+ L G + A ++ + + +G
Sbjct: 452 VWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 157/318 (49%), Gaps = 5/318 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKR--ISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
++ ++ LC+ V+ A ++++ AK+ I D +Y +ISG+ +G+++E +L +
Sbjct: 224 FNALLRCLCERSHVSAAKSVFN---AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
MV PD ++S L++ L + G++ ++ + + G PD Y++++ + +
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+++ + M E P++++YS +++GL K + V DAL +F++M + + P +S
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+ LC G A + + G + Y LL L + +++ +M+ G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
DV Y ++DGLC G L++A V ++ + KG+ + Y+ + + L + A
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAY 520
Query: 300 ALMSKMEDNGCTPDAVTY 317
L K++ T +A ++
Sbjct: 521 KLFLKIKKARATENARSF 538
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 138/298 (46%), Gaps = 34/298 (11%)
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+ DV ++S+++ AL + +VL M+ G PD+ + MD + V+ V +A
Sbjct: 147 VTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAI 206
Query: 125 DI---------------FNTMTRM-------------------ELAPDVQSYSIMINGLC 150
++ FN + R + D SY+IMI+G
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWS 266
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
K+ V++ + K+M PD ++YS LI+GL ++GRI+D+ E+ + + +G P+
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
Y++++ D ++ ++M + P++ TY+ L+ GL KG ++ DA E+F+++
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
L +G T + LC G A+ + K GC Y++++ L + G
Sbjct: 387 LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 118/248 (47%), Gaps = 1/248 (0%)
Query: 99 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
G DV +YS ++ + D+ M + PD++ +I ++ ++ V A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
+ LF++ + + ++++L+ LC+ +S A + N +P + +Y+ ++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKG-NIPFDSCSYNIMISG 264
Query: 219 LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
K V+ ++K+M G PD +Y+ L++GL + GR+ D+ E+F ++ KG D
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPD 324
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
Y MI FDE++ +M D C P+ TY ++ L + A ++
Sbjct: 325 ANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE 384
Query: 339 QMIARGLL 346
+M++RG+L
Sbjct: 385 EMLSRGVL 392
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 87/196 (44%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I + + +++ Y ML + P++ TY+ L+SG ++ +A+ + +M
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + + P + + LC G A + K G + Y L+ +
Sbjct: 387 LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKC 446
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++++ M DV+ Y +++GLC I +++A+ + ++ + P+ YS L
Sbjct: 447 GMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Query: 181 IDGLCKSGRISDAWEL 196
L S + A++L
Sbjct: 507 SSKLMASNKTELAYKL 522
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 178/411 (43%), Gaps = 67/411 (16%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY+ ++ CKD + A LY M+ + D + TLI GF +G L + + +QM
Sbjct: 274 MYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQM 333
Query: 61 VVKSINPDVYTFSILVDALCKEGKVK---------------------------------- 86
+ K + +V+T+ I++ + CKEG V
Sbjct: 334 IKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGG 393
Query: 87 --EAKNVLAVMIKGGEKPDVVTY--------------------SSLMDGYCLVN------ 118
+A ++L M+ G PD +TY S++D C +N
Sbjct: 394 MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDD 453
Query: 119 ----EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
EV K E + + R + +++ LC + AL+ ++M TP
Sbjct: 454 LGNIEV-KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLP 512
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
+Y+S+I L + I D LVN + P+V TY +++ LCK + D A ++I
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDA 572
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 294
M+ G+ P V Y+ ++ L K GR+ +A+E F +L G D Y IMIN ++G
Sbjct: 573 MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGR 632
Query: 295 FDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
DEA L+ ++ + P + TY ++I + G +K + L +M+ GL
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 176/347 (50%), Gaps = 11/347 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+YS+II SL K V +A +++ML I PD + Y +I+ + G++ EA L+ ++
Sbjct: 584 IYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEV 643
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + P +T+++L+ K G +++ L M++ G P+VV Y++L+ + +
Sbjct: 644 VKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ +F M ++ D +Y +++GL + + + E + ++ L
Sbjct: 704 KFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPL 763
Query: 181 I---DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ L G S A E++ ++ + + PN+ +++++ C +D A + ++ M+
Sbjct: 764 VSIPSSLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQK 822
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMINGLCKDGLF 295
+GI+P++ TYTIL+ + G ++ A ++F+ G N D Y+ ++ GLC
Sbjct: 823 EGIVPNLVTYTILMKSHIEAGDIESAIDLFE-----GTNCEPDQVMYSTLLKGLCDFKRP 877
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
+ALALM +M+ +G P+ +YE ++ L +A K+++ M A
Sbjct: 878 LDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAA 924
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 165/381 (43%), Gaps = 44/381 (11%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV------- 54
Y+ +I K ++ A +L ML I PD +TY L+ +LK A+
Sbjct: 381 YTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSIL 440
Query: 55 ----------------------GLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
LL ++ K N +++ ALC + A + +
Sbjct: 441 DNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRI 500
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI---FNTMTRMELAPDVQSYSIMINGL 149
M+ G P +Y+S++ CL E N ED+ N + ++ PDV +Y I++N L
Sbjct: 501 EKMVNLGCTPLPFSYNSVIK--CLFQE-NIIEDLASLVNIIQELDFVPDVDTYLIVVNEL 557
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
CK D A + M + P V YSS+I L K GR+ +A E +M G+ P+
Sbjct: 558 CKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDE 617
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
I Y +++ +N +D A L++++ + P +TYT+L+ G K G ++ +
Sbjct: 618 IAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDK 677
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+L G + +V YT +I K G F + L M +N D + Y ++ L++
Sbjct: 678 MLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMA 737
Query: 330 NDK---------AEKLLRQMI 341
K EKLL+++I
Sbjct: 738 RKKKRQVIVEPGKEKLLQRLI 758
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 166/361 (45%), Gaps = 42/361 (11%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++I L ++ ++ D +L + + PDV TY +++ C A +++ M
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P V +S ++ +L K+G+V EA+ A M++ G +PD + Y +++ Y ++
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++ + + L P +Y+++I+G K+ M++ +M + ++P+VV Y++LI
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK-------------------- 221
K G ++ L M + + I Y +LL L +
Sbjct: 695 GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLL 754
Query: 222 -----------------NHHVDN-AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
N+ + A+ +I K+K + I+P++Y + ++ G C GRL +A
Sbjct: 755 QRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEA 813
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
+ + +G ++ TYTI++ + G + A+ L E C PD V Y ++
Sbjct: 814 YNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL---FEGTNCEPDQVMYSTLLKG 870
Query: 324 L 324
L
Sbjct: 871 L 871
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 166/375 (44%), Gaps = 30/375 (8%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y ++ CK +A L+ M D V YT L+ +C + A+ L +M
Sbjct: 239 LYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRM 298
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V +S D F+ L+ K G + + + + + MIK G + +V TY ++ YC V
Sbjct: 299 VERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNV 358
Query: 121 NKAEDIF-NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ A +F N +++ +V Y+ +I G K +D A++L +M I PD +TY
Sbjct: 359 DYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFV 418
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGL---PPNV-------ITYSSLLD------------ 217
L+ L K + A ++ + G PP + + SLL
Sbjct: 419 LLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAV 478
Query: 218 -------ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
ALC + A+S I+KM + G P ++Y ++ L + ++D + +
Sbjct: 479 GLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNII 538
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
+ DV TY I++N LCK D A A++ ME+ G P Y II +L ++G
Sbjct: 539 QELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRV 598
Query: 331 DKAEKLLRQMIARGL 345
+AE+ +M+ G+
Sbjct: 599 VEAEETFAKMLESGI 613
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 156/368 (42%), Gaps = 37/368 (10%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ + +LC + A + +M+ +P +Y ++I +++ L+N +
Sbjct: 481 AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQE 540
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
PDV T+ I+V+ LCK+ A ++ M + G +P V YSS++ V +
Sbjct: 541 LDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVE 600
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
AE+ F M + PD +Y IMIN + +D+A L +++ + P TY+ LI
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G K G + + +++M GL PNV+ Y++L+ K + +L M I
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKH 720
Query: 243 DVYTYTILLDGLCKGGRLKDAQEV---------FQDLL----------------IKGYNL 277
D Y LL GL + K ++V Q L+ K + +
Sbjct: 721 DHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAM 780
Query: 278 DV------------RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
+V + +I G C G DEA + M+ G P+ VTY I++ +
Sbjct: 781 EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 326 QEGDNDKA 333
+ GD + A
Sbjct: 841 EAGDIESA 848
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 12/327 (3%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLA-KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
+ LC +N+A + + R+ V Y +L FC G EA L + M V
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
D ++ L+ CK+ + A + M++ + D +++L+ G+ + ++K
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF-KQMHTENITPDVVTYSSLID 182
+F+ M + + +V +Y IMI CK VD AL LF +E+I+ +V Y++LI
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ--GI 240
G K G + A +L+ M G+ P+ ITY LL L K H + A+ +++ + GI
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGI 446
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P V +D L G + + ++ K NL ++ LC + AL+
Sbjct: 447 NPPV------IDDL--GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALS 498
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQE 327
+ KM + GCTP +Y +I LFQE
Sbjct: 499 RIEKMVNLGCTPLPFSYNSVIKCLFQE 525
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 149/330 (45%), Gaps = 11/330 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSE-MLAKRISPDVVTYTTLISGFCIVG--QLKEAVGLLN 58
Y +I L + A Y++ ++ I PD +++ FC+V + EA L+
Sbjct: 98 YGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMV--FCLVKLRRFDEARAHLD 155
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+++ P + S++VD LC + + EA + + + G + L G C
Sbjct: 156 RIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHG 215
Query: 119 EVNKAEDIFNT---MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
+N+A + +T MTRM L V Y + CK +A LF M + D V
Sbjct: 216 HLNEAIGMLDTLCGMTRMPLP--VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKV 273
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
Y+ L+ CK ++ A L M R + +++L+ K +D + +M
Sbjct: 274 MYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQM 333
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVF-QDLLIKGYNLDVRTYTIMINGLCKDGL 294
+G+ +V+TY I++ CK G + A +F + + + +V YT +I G K G
Sbjct: 334 IKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGG 393
Query: 295 FDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
D+A+ L+ +M DNG PD +TY +++ L
Sbjct: 394 MDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 40/313 (12%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I K ++ +ML +SP+VV YT LI F G K + L M
Sbjct: 655 YTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMG 714
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVL----------------------------- 92
I D + L+ L + K+ + V+
Sbjct: 715 ENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYG 774
Query: 93 ----AVMIKGGEK----PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
A+ + G K P++ +++++ GYC +++A + +M + + P++ +Y+I
Sbjct: 775 SKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTI 834
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
++ + ++ A++LF+ + E PD V YS+L+ GLC R DA L+ EM G
Sbjct: 835 LMKSHIEAGDIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
+ PN +Y LL LC + A+ ++K M I P +T L+ LC+ +L++A+
Sbjct: 892 INPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREAR 951
Query: 265 EVFQDLLIKGYNL 277
+F ++ G +L
Sbjct: 952 ALFAIMVQSGRSL 964
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 138/320 (43%), Gaps = 3/320 (0%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV-KSINPDVYTFSILVDALCKEGKVKEA 88
I D Y LI +GQ A NQ V+ I PD +V L K + EA
Sbjct: 91 IELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEA 150
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 148
+ L +I G P + S ++D C + +A F + + + G
Sbjct: 151 RAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKG 210
Query: 149 LCKIKMVDDALNLFKQMHTENITP-DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
LC +++A+ + + P V Y SL CK G ++A L + M G
Sbjct: 211 LCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYV 270
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+ + Y+ L+ CK++++ A+ L +M + D + L+ G K G L + +F
Sbjct: 271 DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMF 330
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL-MSKMEDNGCTPDAVTYEIIIYALFQ 326
++ KG +V TY IMI CK+G D AL L ++ + + Y +I+ ++
Sbjct: 331 SQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYK 390
Query: 327 EGDNDKAEKLLRQMIARGLL 346
+G DKA LL +M+ G++
Sbjct: 391 KGGMDKAVDLLMRMLDNGIV 410
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 28 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKE 87
K I P++ + T+I+G+C G+L EA L M + I P++ T++IL+ + + G ++
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIES 847
Query: 88 AKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
A + + +G +PD V YS+L+ G C A + M + + P+ SY ++
Sbjct: 848 AID----LFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
LC ++ +A+ + K M +I P + ++ LI LC+ ++ +A L M G
Sbjct: 904 QCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRS 963
Query: 207 PNVITYSSLLDALCKNHHV 225
T LL L +N +
Sbjct: 964 LLNCTKPGLLKMLNQNQQL 982
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 186/408 (45%), Gaps = 70/408 (17%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
ST++ + ++ L+ +A ++E+ + P VTY L+ F G EA+ +L +M
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
S D T++ LV A + G KEA V+ +M K G P+ +TY++++D Y + ++
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 123 AEDIFNTMTRMELAPDVQSYSIMI---------------------NG------------- 148
A +F +M P+ +Y+ ++ NG
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 149 LCKIKMVDDALN-LFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
LC K +D +N +F++M + PD T+++LI + G DA ++ EM G
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG--------- 258
V TY++LL+AL + + ++I MK +G P +Y+++L KGG
Sbjct: 525 CVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIE 584
Query: 259 -RLKDAQEVFQDLLIK-------------------------GYNLDVRTYTIMINGLCKD 292
R+K+ Q +L++ GY D+ + M++ ++
Sbjct: 585 NRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Query: 293 GLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
++D+A ++ + ++G +PD VTY ++ + G+ KAE++L+ +
Sbjct: 645 NMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 164/345 (47%), Gaps = 1/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ-LKEAVGLLNQM 60
Y+TI+ + + A +L+ M SP +VTY ++ F +G+ ++ +G+L++M
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + D +T S ++ A +EG ++EAK A + G +P VTY++L+ +
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A + M D +Y+ ++ + +A + + M + + P+ +TY+++
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
ID K+G+ +A +L M G PN TY+++L L K + I ++ MK G
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ T+ +L G K VF+++ G+ D T+ +I+ + G +A
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M G TY ++ AL ++GD E ++ M ++G
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 151/322 (46%), Gaps = 3/322 (0%)
Query: 12 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYT 71
DK VN ++ EM + PD T+ TLIS + G +A + +M N V T
Sbjct: 472 DKFVN---RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 131
++ L++AL ++G + +NV++ M G KP +YS ++ Y E I N +
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 132 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRIS 191
++ P ++ K + + + F PD+V ++S++ ++
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 192 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
A ++ + GL P+++TY+SL+D + A ++K ++ + PD+ +Y ++
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
G C+ G +++A + ++ +G + TY ++G G+F E ++ M N C
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 312 PDAVTYEIIIYALFQEGDNDKA 333
P+ +T+++++ + G +A
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEA 790
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 147/311 (47%), Gaps = 5/311 (1%)
Query: 39 TLISGFCIVGQLKEAVGLLNQMVVKS----INPDVYTFSILVDALCKEGKVKEAKNVLAV 94
+L+ G G + AV L +V+ S + D I V L +E + A +L
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 95 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI-K 153
+ DV Y++++ Y + KA D+F M M +P + +Y+++++ K+ +
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 154 MVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 213
L + +M ++ + D T S+++ + G + +A E E+ S G P +TY+
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
+LL K A+S++K+M+ D TY L+ + G K+A V + + K
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 274 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA 333
G + TYT +I+ K G DEAL L M++ GC P+ TY ++ L ++ +++
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 334 EKLLRQMIARG 344
K+L M + G
Sbjct: 441 IKMLCDMKSNG 451
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 124/270 (45%), Gaps = 35/270 (12%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC----------IVGQLK 51
Y+ ++++L + N+ S+M +K P +Y+ ++ + I ++K
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 52 EAVGLLNQMVVKSI-------------------------NPDVYTFSILVDALCKEGKVK 86
E + M+++++ PD+ F+ ++ +
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
+A+ +L + + G PD+VTY+SLMD Y E KAE+I T+ + +L PD+ SY+ +I
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
G C+ ++ +A+ + +M I P + TY++ + G G ++ +++ M
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMK 236
PN +T+ ++D C+ A+ + K+K
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
D Q I + L + A L ++ + DV Y++++ ++G+ A +L
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 198 NEMHSRGLPPNVITYSSLLDALCK-NHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCK 256
M G P ++TY+ +LD K + ++ +M+ +G+ D +T + +L +
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 257 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
G L++A+E F +L GY TY ++ K G++ EAL+++ +ME+N C D+VT
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 317 YEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
Y ++ A + G + +A ++ M +G++
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 90/167 (53%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++++++ ++ + + A + + +SPD+VTY +L+ + G+ +A +L +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD+ +++ ++ C+ G ++EA +L+ M + G +P + TY++ + GY +
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+ ED+ M + + P+ ++ ++++G C+ +A++ ++ T
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 75/140 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y++++D + A + + ++ PD+V+Y T+I GFC G ++EAV +L++M
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I P ++T++ V G E ++V+ M K +P+ +T+ ++DGYC + +
Sbjct: 729 ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYS 788
Query: 122 KAEDIFNTMTRMELAPDVQS 141
+A D + + + D QS
Sbjct: 789 EAMDFVSKIKTFDPCFDDQS 808
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 162/345 (46%), Gaps = 2/345 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+ID K +NDA NL+SEML + D VT+ T+I G L EA LL +M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K I+PD T++IL+ G ++ A + K G PD VT+ +++ C V
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ E + M R + D S +++ +V A LF++ + + T +++I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS-TTLAAVI 486
Query: 182 DGLCKSGRISDAWELV-NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
D + G +A + + + G +V+ Y+ ++ A K + A+SL K MK+QG
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD TY L L + +AQ + ++L G +TY MI + GL +A+
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L ME G P+ V Y +I + G ++A + R M G+
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 135/280 (48%), Gaps = 2/280 (0%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
DV +++++ A K ++A ++ M G PD TY+SL V+ V++A+ I
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
M P ++Y+ MI ++ ++ DA++L++ M + P+ V Y SLI+G +S
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
G + +A + M G+ N I +SL+ A K ++ A + KMK PDV
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+L G + +A+ +F L KG DV ++ M+ G+ DEA+ + +M +
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM-IARGLL 346
+G D ++ ++ +G + +L +M + R LL
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLL 792
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 4/345 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++ L LV++A + +EML P TY +I+ + +G L +AV L M
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+ + L++ + G V+EA +M + G + + + +SL+ Y V +
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +++ M E PDV + + M++ + +V +A ++F + E T DV+++++++
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR-EKGTCDVISFATMM 731
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGI 240
G + +A E+ EM GL + +++ ++ + + L +M + +
Sbjct: 732 YLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKL 791
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
L D T+ L L KGG +A Q + L T + GL+ AL
Sbjct: 792 LLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATL--FSAMGLYAYALE 849
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ + Y +IY GD D A K +M +GL
Sbjct: 850 SCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGL 894
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 145/300 (48%), Gaps = 2/300 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I + K KL A +L+ M + PD TY +L V + EA +L +M+
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P T++ ++ + + G + +A ++ M K G KP+ V Y SL++G+ V
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A F M + + + +I K+ +++A ++ +M PDV +S++
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G +S+A + N + +G +VI++++++ +D AI + ++M+ G+L
Sbjct: 698 SLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL 756
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLI-KGYNLDVRTYTIMINGLCKDGLFDEALA 300
D ++ ++ G+L + E+F ++L+ + LD T+ + L K G+ EA++
Sbjct: 757 SDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
TF+ L+D K G++ +A N+ + M+K G D VT+++++ +++AE + M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
++PD ++Y+I+++ ++ AL ++++ + PD VT+ +++ LC+ +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 191 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTIL 250
++ ++ EM + + + ++ V A +L ++ + +L T +
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLAAV 485
Query: 251 LDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+D + G +A+ VF + G DV Y +MI K L ++AL+L M++ G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 310 CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
PD TY + L D+A+++L +M+ G
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG 580
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 133/338 (39%), Gaps = 70/338 (20%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I S + L++DA +LY M + P+ V Y +LI+GF G ++EA+ M
Sbjct: 588 YAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME 647
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + + L+ A K G ++EA+ V M PDV +S++ + V+
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVS 707
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN--------------------- 160
+AE IFN + R + DV S++ M+ + M+D+A+
Sbjct: 708 EAESIFNAL-REKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 161 --------------LFKQMHTEN-ITPDVVTYSSLIDGLCKSGRISDA------------ 193
LF +M E + D T+ +L L K G S+A
Sbjct: 767 ACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAK 826
Query: 194 ---------------------WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
E E+ S +P Y++++ + +D A+
Sbjct: 827 PLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAY 886
Query: 233 KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
+M+ +G+ PD+ T L+ K G ++ + V L
Sbjct: 887 MRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 164/328 (50%), Gaps = 5/328 (1%)
Query: 19 YNLYSEMLAKRISPDVV----TYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+NL ++LAK S +T LI + ++ + +M+ + P +
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 75 LVDAL-CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 133
++D L G +++A + G P+ +Y+ LM +CL ++++ A +F M
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 134 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDA 193
++ PDV SY I+I G C+ V+ A+ L M + PD ++Y++L++ LC+ ++ +A
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 194 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDG 253
++L+ M +G P+++ Y++++ C+ +A ++ M G P+ +Y L+ G
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 254 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPD 313
LC G + ++ ++++ KG++ ++ G C G +EA ++ + NG T
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 314 AVTYEIIIYALFQEGDNDKAEKLLRQMI 341
+ T+E++I + E +++K + L +
Sbjct: 400 SDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 120/219 (54%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++ + C + ++ AY L+ +ML + + PDV +Y LI GFC GQ+ A+ LL+ M+
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K PD +++ L+++LC++ +++EA +L M G PD+V Y++++ G+C +
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A + + M +P+ SY +I GLC M D+ ++M ++ +P + L+
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 220
G C G++ +A ++V + G + T+ ++ +C
Sbjct: 373 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 1/204 (0%)
Query: 142 YSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL-CKSGRISDAWELVNEM 200
++ +I + K+ + L+ F +M N TP + ++D L G + A+EL
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
G+ PN +Y+ L+ A C N + A L KM + ++PDV +Y IL+ G C+ G++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
A E+ D+L KG+ D +YT ++N LC+ EA L+ +M+ GC PD V Y +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 321 IYALFQEGDNDKAEKLLRQMIARG 344
I +E A K+L M++ G
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNG 325
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 1/252 (0%)
Query: 5 IIDSLCKDK-LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
I+D L + + A+ L+ + P+ +Y L+ FC+ L A L +M+ +
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
+ PDV ++ IL+ C++G+V A +L M+ G PD ++Y++L++ C ++ +A
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
+ M PD+ Y+ MI G C+ DA + M + +P+ V+Y +LI G
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
LC G + + + EM S+G P+ + L+ C V+ A +++ + G
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 244 VYTYTILLDGLC 255
T+ +++ +C
Sbjct: 400 SDTWEMVIPLIC 411
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I C++ DA + +ML+ SP+ V+Y TLI G C G E L +M+
Sbjct: 298 YNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMI 357
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K +P + LV C GKV+EA +V+ V++K GE T+ ++ C +E
Sbjct: 358 SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 417
Query: 122 KAEDIFNTMTRMELAPDVQ 140
K + + E+ D +
Sbjct: 418 KIKLFLEDAVKEEITGDTR 436
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 167/344 (48%), Gaps = 2/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y++++ L K + ++ EM K + + T+T + F + K+AVG+ M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V T + L+D+L + KEA+ VL +K P+++TY+ L++G+C V +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I+N M L PD+ ++++M+ GL + DA+ LF M ++ P+V +Y+ +I
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
CK + A E ++M GL P+ Y+ L+ +D L+K+M+ +G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY L+ + + ++ ++ + T+ +++ ++ A+
Sbjct: 436 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 495
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G PD +Y ++I L EG + +A + L +M+ +G+
Sbjct: 496 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 51 KEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 110
KEA L +++ + P++ T+++L++ C+ + EA + MI G KPD+V ++ +
Sbjct: 281 KEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVM 339
Query: 111 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 170
++G + + A +F+ M P+V+SY+IMI CK ++ A+ F M +
Sbjct: 340 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 171 TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 230
PD Y+ LI G ++ +EL+ EM +G PP+ TY++L+ + ++
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 459
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
+ KM I P ++T+ +++ + + V+ +++ KG D +YT++I GL
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 519
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
+G EA + +M D G + Y + G + E+L ++
Sbjct: 520 SEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 568
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 4/203 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I CK + A + +M+ + PD YT LI+GF +L LL +M
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K PD T++ L+ + + + + MI+ +P + T++ +M Y +
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 490
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+++ M + + PD SY+++I GL +A ++M + + ++ Y+
Sbjct: 491 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 182 DGLCKSGRISDAWELVNEMHSRG 204
+ G+ E+ E+ R
Sbjct: 551 ADFHRGGQP----EIFEELAQRA 569
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
TY+S++ L K+ + ++ EM ++GL + T++ + A A+ + + M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
K V T LLD L + K+AQ +F D L + + ++ TYT+++NG C+
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLF-DKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
EA + + M D+G PD V + +++ L + A KL M ++G
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 167/344 (48%), Gaps = 2/344 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y++++ L K + ++ EM K + + T+T + F + K+AVG+ M
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V T + L+D+L + KEA+ VL +K P+++TY+ L++G+C V +
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A I+N M L PD+ ++++M+ GL + DA+ LF M ++ P+V +Y+ +I
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 374
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
CK + A E ++M GL P+ Y+ L+ +D L+K+M+ +G
Sbjct: 375 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 434
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY L+ + + ++ ++ + T+ +++ ++ A+
Sbjct: 435 PDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 494
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+M G PD +Y ++I L EG + +A + L +M+ +G+
Sbjct: 495 WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 51 KEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 110
KEA L +++ + P++ T+++L++ C+ + EA + MI G KPD+V ++ +
Sbjct: 280 KEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVM 338
Query: 111 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 170
++G + + A +F+ M P+V+SY+IMI CK ++ A+ F M +
Sbjct: 339 LEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 398
Query: 171 TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 230
PD Y+ LI G ++ +EL+ EM +G PP+ TY++L+ + ++
Sbjct: 399 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTR 458
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
+ KM I P ++T+ +++ + + V+ +++ KG D +YT++I GL
Sbjct: 459 IYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 518
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
+G EA + +M D G + Y + G + E+L ++
Sbjct: 519 SEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 567
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 4/203 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I CK + A + +M+ + PD YT LI+GF +L LL +M
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K PD T++ L+ + + + + MI+ +P + T++ +M Y +
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+++ M + + PD SY+++I GL +A ++M + + ++ Y+
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549
Query: 182 DGLCKSGRISDAWELVNEMHSRG 204
+ G+ E+ E+ R
Sbjct: 550 ADFHRGGQP----EIFEELAQRA 568
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+ D TY+S++ L K+ + ++ EM ++GL + T++ + A
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 246
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A+ + + MK V T LLD L + K+AQ +F D L + + ++ TYT+++N
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF-DKLKERFTPNMMTYTVLLN 305
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
G C+ EA + + M D+G PD V + +++ L + A KL M ++G
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 164/340 (48%), Gaps = 10/340 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++S + N+A ++ M + P +TY ++ F + KEA + ++
Sbjct: 184 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 243
Query: 62 ---VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+ PD + +++ K G ++A+ V + M+ G VTY+SLM
Sbjct: 244 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK 303
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
EV+K I++ M R ++ PDV SY+++I + + ++AL++F++M + P Y+
Sbjct: 304 EVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
L+D SG + A + M + P++ +Y+++L A ++ A K++K
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 420
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG--YNLDVRTYTIMINGLCKDGLFD 296
G P++ TY L+ G K ++ EV++ + + G N + T + +G CK+ F
Sbjct: 421 GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FG 478
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
AL +ME G PD +++ + + ++A++L
Sbjct: 479 SALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 3/266 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY +I K A ++S M+ K + VTY +L+S KE + +QM
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQM 312
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I PDV ++++L+ A + + +EA +V M+ G +P Y+ L+D + + V
Sbjct: 313 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 372
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A+ +F +M R + PD+ SY+ M++ ++ A FK++ + P++VTY +L
Sbjct: 373 EQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 432
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G K+ + E+ +M G+ N ++++DA + + +A+ K+M+ G+
Sbjct: 433 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 492
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEV 266
PD +LL L++A+E+
Sbjct: 493 PPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 6/282 (2%)
Query: 31 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKN 90
+P+V++YT L+ + G+ A + +M P T+ I++ + K KEA+
Sbjct: 178 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 237
Query: 91 VLAVMI---KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
V ++ K KPD Y ++ Y KA +F++M + +Y+ +++
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
K V ++ QM +I PDVV+Y+ LI ++ R +A + EM G+ P
Sbjct: 298 FETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 354
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
Y+ LLDA + V+ A ++ K M+ I PD+++YT +L ++ A++ F
Sbjct: 355 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 414
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+ + + G+ ++ TY +I G K ++ + + KM +G
Sbjct: 415 KRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG 456
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 149/314 (47%), Gaps = 6/314 (1%)
Query: 35 VTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 94
+ + LI+ + +G A +L+ + P+V +++ L+++ + GK A+ +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 95 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM---TRMELAPDVQSYSIMINGLCK 151
M G +P +TY ++ + ++ +AE++F T+ + L PD + Y +MI K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
+ A +F M + + VTY+SL+ +S ++ ++M + P+V++
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVS 323
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
Y+ L+ A + + A+S+ ++M G+ P Y ILLD G ++ A+ VF+ +
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
D+ +YT M++ + A +++ +G P+ VTY +I + D +
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 443
Query: 332 KAEKLLRQMIARGL 345
K ++ +M G+
Sbjct: 444 KMMEVYEKMRLSGI 457
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 156/325 (48%), Gaps = 10/325 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +++S + N+A ++ M + P +TY ++ F + KEA + ++
Sbjct: 177 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 236
Query: 62 ---VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+ PD + +++ K G ++A+ V + M+ G VTY+SLM
Sbjct: 237 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK 296
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
EV+K I++ M R ++ PDV SY+++I + + ++AL++F++M + P Y+
Sbjct: 297 EVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 353
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
L+D SG + A + M + P++ +Y+++L A ++ A K++K
Sbjct: 354 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 413
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG--YNLDVRTYTIMINGLCKDGLFD 296
G P++ TY L+ G K ++ EV++ + + G N + T + +G CK+ F
Sbjct: 414 GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FG 471
Query: 297 EALALMSKMEDNGCTPDAVTYEIII 321
AL +ME G PD +++
Sbjct: 472 SALGWYKEMESCGVPPDQKAKNVLL 496
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 3/266 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY +I K A ++S M+ K + VTY +L+S KE + +QM
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQM 305
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I PDV ++++L+ A + + +EA +V M+ G +P Y+ L+D + + V
Sbjct: 306 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 365
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A+ +F +M R + PD+ SY+ M++ ++ A FK++ + P++VTY +L
Sbjct: 366 EQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 425
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G K+ + E+ +M G+ N ++++DA + + +A+ K+M+ G+
Sbjct: 426 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 485
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEV 266
PD +LL L++A+E+
Sbjct: 486 PPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 6/282 (2%)
Query: 31 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKN 90
+P+V++YT L+ + G+ A + +M P T+ I++ + K KEA+
Sbjct: 171 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 230
Query: 91 VLAVMI---KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
V ++ K KPD Y ++ Y KA +F++M + +Y+ +++
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
K V ++ QM +I PDVV+Y+ LI ++ R +A + EM G+ P
Sbjct: 291 FETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
Y+ LLDA + V+ A ++ K M+ I PD+++YT +L ++ A++ F
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+ + + G+ ++ TY +I G K ++ + + KM +G
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG 449
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 149/314 (47%), Gaps = 6/314 (1%)
Query: 35 VTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 94
+ + LI+ + +G A +L+ + P+V +++ L+++ + GK A+ +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 95 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM---TRMELAPDVQSYSIMINGLCK 151
M G +P +TY ++ + ++ +AE++F T+ + L PD + Y +MI K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
+ A +F M + + VTY+SL+ +S ++ ++M + P+V++
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVS 316
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
Y+ L+ A + + A+S+ ++M G+ P Y ILLD G ++ A+ VF+ +
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
D+ +YT M++ + A +++ +G P+ VTY +I + D +
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 436
Query: 332 KAEKLLRQMIARGL 345
K ++ +M G+
Sbjct: 437 KMMEVYEKMRLSGI 450
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 154/320 (48%), Gaps = 8/320 (2%)
Query: 9 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV----KS 64
LC+ + A ++ EM + PD +Y L+ GFC+ G+L+EA LL M K
Sbjct: 162 LCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKG 221
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE--VNK 122
D+ + IL+DALC G+V +A +L +++ G K Y + G+ + + +
Sbjct: 222 SGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIER 281
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+ + P + SYS M L + + + + M ++ P Y + +
Sbjct: 282 VKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVK 341
Query: 183 GLCKSGRISDAWELVN-EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GI 240
LC++G++ +A ++N EM P V Y+ L+ LC + A+ +KKM Q
Sbjct: 342 ALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSC 401
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ + TY L+DGLC+ G+ +A +V +++LIK + V TY +MI GLC EA+
Sbjct: 402 VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVM 461
Query: 301 LMSKMEDNGCTPDAVTYEII 320
+ +M P++ ++ +
Sbjct: 462 WLEEMVSQDMVPESSVWKAL 481
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 168/356 (47%), Gaps = 13/356 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEM-LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ T++ + K+ + A +++ + ++ + L+ C V + A + +M
Sbjct: 119 FDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEM 178
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI----KGGEKPDVVTYSSLMDGYCL 116
+ PD ++ IL+ C EGK++EA ++L M + G D+V Y L+D C
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT----P 172
EV+ A +I + R L + Y + G + + + K++ TE + P
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAG--HWESSSEGIERVKRLLTETLIRGAIP 296
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
+ +YS++ L + G++ + E++ M S+G P Y + + ALC+ + A+S+I
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 233 KKMKHQG-ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMINGLC 290
K QG LP V Y +L+ GLC G+ +A + + + + + TY +++GLC
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC 416
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+DG F EA +M +M P TY ++I L +A L +M+++ ++
Sbjct: 417 RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 125/259 (48%), Gaps = 4/259 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ--LKEAVGLLN 58
+Y ++D+LC V+DA + ++L K + Y + +G ++ LL
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+ +++ P + ++S + L +EGK+ E + VL M G +P Y + + C
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 119 EVNKAEDIFNT-MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVT 176
++ +A + N M + P V Y+++I GLC +A+ K+M + + + T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y +L+DGLC+ G+ +A +++ EM + P V TY ++ LC A+ +++M
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMV 467
Query: 237 HQGILPDVYTYTILLDGLC 255
Q ++P+ + L + +C
Sbjct: 468 SQDMVPESSVWKALAESVC 486
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 101/210 (48%), Gaps = 7/210 (3%)
Query: 142 YSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM- 200
++ +I + ++DA++LFK +H N +++ +L+ + K + A + +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
+ + + + L+ LC+ + D A + ++M +QG PD +Y IL+ G C G+L
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 261 KDAQEV----FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
++A + F + KG D+ Y I+++ LC G D+A+ ++ K+ G
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 317 YEIIIYALFQEGDN--DKAEKLLRQMIARG 344
Y I ++ ++ ++LL + + RG
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRG 293
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 154/320 (48%), Gaps = 8/320 (2%)
Query: 9 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV----KS 64
LC+ + A ++ EM + PD +Y L+ GFC+ G+L+EA LL M K
Sbjct: 162 LCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKG 221
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE--VNK 122
D+ + IL+DALC G+V +A +L +++ G K Y + G+ + + +
Sbjct: 222 SGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIER 281
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+ + P + SYS M L + + + + M ++ P Y + +
Sbjct: 282 VKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVK 341
Query: 183 GLCKSGRISDAWELVN-EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GI 240
LC++G++ +A ++N EM P V Y+ L+ LC + A+ +KKM Q
Sbjct: 342 ALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSC 401
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ + TY L+DGLC+ G+ +A +V +++LIK + V TY +MI GLC EA+
Sbjct: 402 VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVM 461
Query: 301 LMSKMEDNGCTPDAVTYEII 320
+ +M P++ ++ +
Sbjct: 462 WLEEMVSQDMVPESSVWKAL 481
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 168/356 (47%), Gaps = 13/356 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEM-LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ T++ + K+ + A +++ + ++ + L+ C V + A + +M
Sbjct: 119 FDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEM 178
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI----KGGEKPDVVTYSSLMDGYCL 116
+ PD ++ IL+ C EGK++EA ++L M + G D+V Y L+D C
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT----P 172
EV+ A +I + R L + Y + G + + + K++ TE + P
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAG--HWESSSEGIERVKRLLTETLIRGAIP 296
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
+ +YS++ L + G++ + E++ M S+G P Y + + ALC+ + A+S+I
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 233 KKMKHQG-ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMINGLC 290
K QG LP V Y +L+ GLC G+ +A + + + + + TY +++GLC
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC 416
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+DG F EA +M +M P TY ++I L +A L +M+++ ++
Sbjct: 417 RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 125/259 (48%), Gaps = 4/259 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ--LKEAVGLLN 58
+Y ++D+LC V+DA + ++L K + Y + +G ++ LL
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+ +++ P + ++S + L +EGK+ E + VL M G +P Y + + C
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 119 EVNKAEDIFNT-MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVT 176
++ +A + N M + P V Y+++I GLC +A+ K+M + + + T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y +L+DGLC+ G+ +A +++ EM + P V TY ++ LC A+ +++M
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMV 467
Query: 237 HQGILPDVYTYTILLDGLC 255
Q ++P+ + L + +C
Sbjct: 468 SQDMVPESSVWKALAESVC 486
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 101/210 (48%), Gaps = 7/210 (3%)
Query: 142 YSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM- 200
++ +I + ++DA++LFK +H N +++ +L+ + K + A + +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
+ + + + L+ LC+ + D A + ++M +QG PD +Y IL+ G C G+L
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 261 KDAQEV----FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
++A + F + KG D+ Y I+++ LC G D+A+ ++ K+ G
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 317 YEIIIYALFQEGDN--DKAEKLLRQMIARG 344
Y I ++ ++ ++LL + + RG
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRG 293
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 19/358 (5%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP-------DVVTYTTLISGFCIVGQLKEA 53
+ +++ ++ D DAY L+ L K I ++ LI+ F +G+ K A
Sbjct: 193 LVESLLVAIASDTRRMDAYGLWD--LVKEIGEKESCGVLNLEILNELIALFGKLGKSKAA 250
Query: 54 VGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 113
+ ++ P+ T+ + ++ALCK + A +V M+K G + +++
Sbjct: 251 FDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITW 310
Query: 114 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK----IKMVDDAL-NLFKQMHTE 168
+C + +A ++ E + + + +I LCK I + L +L +
Sbjct: 311 FCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRR 370
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
I P +S +I LC+ + DA L+ +M S+G P ++ ++ A K +D A
Sbjct: 371 GIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
++K M+ +G+ PDVYTYT+++ G KGG + +AQE+ + K L TY +I G
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG 486
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL-FQEGDNDKAEKLLRQMIARGL 345
CK +DEAL L+++M+ G P+A Y +I + + D +KAE L +M +GL
Sbjct: 487 YCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 145/319 (45%), Gaps = 2/319 (0%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
+ L ++ LV +A +Y+ + IS VVT +++ G +L L +MV
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
+ + L+ ALC G V E +L +K G P Y+ L+ G+C + +
Sbjct: 212 DSE--RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+ +TM P + Y +I GLC K +A +FK + + PD V Y+++I G C
Sbjct: 270 VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFC 329
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
+ G + A +L EM +G+ PN Y+ ++ K + + +M G +
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTML 389
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
+ ++ G C G+ +A E+F+++ G + TY +I G CK+ ++ L L ++
Sbjct: 390 SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Query: 306 EDNGCTPDAVTYEIIIYAL 324
+ G P + Y ++ L
Sbjct: 450 KALGLKPSGMAYAALVRNL 468
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 123/250 (49%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
+I +LC V++ Y L + L + + P Y LISGFC +G +L+ M+ +
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
P +Y + ++ LC K EA + + G PD V Y++++ G+C + A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
++ M + + P+ +Y++MI+G K + + +M +++ +++I G
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
C G+ +A+E+ M G+ PN ITY++L+ CK + V+ + L K++K G+ P
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSG 458
Query: 245 YTYTILLDGL 254
Y L+ L
Sbjct: 459 MAYAALVRNL 468
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I C+ + M+A P + Y +I G C+ + EA + +
Sbjct: 250 VYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNL 309
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K PD ++ ++ C++G + A+ + MIK G +P+ Y+ ++ G+ E+
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEI 369
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ E +N M R + S + MI G C D+A +FK M +TP+ +TY++L
Sbjct: 370 SLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNAL 429
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
I G CK ++ +L E+ + GL P+ + Y++L+ L + V +++L
Sbjct: 430 IKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 93/242 (38%), Gaps = 36/242 (14%)
Query: 137 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWEL 196
P S +I+ L K V A + + T P+ + L + G + +A E+
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSF---LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEV 167
Query: 197 VNEMHSRGLPPNVITYSS---------------------------------LLDALCKNH 223
N + G+ +V+T +S L+ ALC
Sbjct: 168 YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGG 227
Query: 224 HVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 283
V L+K+ QG+ P Y Y L+ G C+ G EV ++ + + Y
Sbjct: 228 DVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQ 287
Query: 284 IMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+I GLC + EA + ++D G PD V Y +I ++G A KL +MI +
Sbjct: 288 KIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
Query: 344 GL 345
G+
Sbjct: 348 GM 349
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 141/263 (53%), Gaps = 1/263 (0%)
Query: 14 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK-SINPDVYTF 72
+ A+ L+ EM V ++ L+S + +L EA+ ++ K I PD+ T+
Sbjct: 137 MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
+ ++ ALC++G + + ++ + K G +PD++++++L++ + + + I++ M
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
L+P+++SY+ + GL + K DALNL M TE I+PDV TY++LI + +
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
+ NEM +GL P+ +TY L+ LCK +D A+ + ++ +L Y +++
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVE 376
Query: 253 GLCKGGRLKDAQEVFQDLLIKGY 275
L G++ +A ++ ++ ++ Y
Sbjct: 377 RLMGAGKIDEATQLVKNGKLQSY 399
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 128/245 (52%), Gaps = 3/245 (1%)
Query: 103 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 162
D V L+ GY + E A +F+ M + V+S++ +++ K +D+A+ F
Sbjct: 123 DFVIRIMLLYGYSGMAE--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTF 180
Query: 163 KQMHTE-NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 221
K++ + ITPD+VTY+++I LC+ G + D + E+ G P++I++++LL+ +
Sbjct: 181 KELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR 240
Query: 222 NHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 281
+ MK + + P++ +Y + GL + + DA + + +G + DV T
Sbjct: 241 RELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHT 300
Query: 282 YTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
Y +I D +E + ++M++ G TPD VTY ++I L ++GD D+A ++ + I
Sbjct: 301 YNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAI 360
Query: 342 ARGLL 346
LL
Sbjct: 361 KHKLL 365
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 126/236 (53%), Gaps = 1/236 (0%)
Query: 104 VVTYSSLMDGYCLVNEVNKAEDIFNTMT-RMELAPDVQSYSIMINGLCKIKMVDDALNLF 162
V ++++L+ Y ++++A F + ++ + PD+ +Y+ MI LC+ +DD L++F
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 163 KQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 222
+++ PD++++++L++ + + + + M S+ L PN+ +Y+S + L +N
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 223 HHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
+A++LI MK +GI PDV+TY L+ L++ + + ++ KG D TY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
++I LCK G D A+ + + + Y+ ++ L G D+A +L++
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 103/196 (52%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I +LC+ ++D +++ E+ PD++++ TL+ F E + + M
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K+++P++ +++ V L + K +A N++ VM G PDV TY++L+ Y + N +
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ +N M L PD +Y ++I LCK +D A+ + ++ + Y ++
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 182 DGLCKSGRISDAWELV 197
+ L +G+I +A +LV
Sbjct: 376 ERLMGAGKIDEATQLV 391
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 81/162 (50%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+++ + +L + ++ M +K +SP++ +Y + + G + +A+ L++ M
Sbjct: 231 FNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMK 290
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I+PDV+T++ L+ A + ++E M + G PD VTY L+ C +++
Sbjct: 291 TEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLD 350
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 163
+A ++ + +L Y ++ L +D+A L K
Sbjct: 351 RAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 172/354 (48%), Gaps = 20/354 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRIS-PDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ +ID L K ++ L + M+ S P+ VT+ + + ++EA+ +++
Sbjct: 84 FNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKL 143
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEA------KNVLAVMIKGGEKPDVVTYSSLMDGY 114
++ D +F LVDALC+ V EA KNV+ G + ++ ++ G+
Sbjct: 144 DDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVIG---NGFSVSNTKIHNLILRGW 199
Query: 115 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
+ K ++ + M + D+ SYSI ++ +CK A+ L+K+M + + DV
Sbjct: 200 SKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDV 259
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
V Y+++I + S + + EM RG PNV T+++++ LC++ + +A ++ +
Sbjct: 260 VAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDE 319
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEV---FQDLLIKGYNLDVRTYTIMINGLCK 291
M +G PD TY +C RL+ E+ F ++ G + TY +++ +
Sbjct: 320 MPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFER 373
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G L + M+++G TPD+ Y +I AL Q+G D A + +MI RGL
Sbjct: 374 WGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 9/210 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +D +CK A LY EM ++R+ DVV Y T+I ++ + + +M
Sbjct: 227 YSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMR 286
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+V T + ++ LC++G++++A +L M K G +PD +TY CL + +
Sbjct: 287 ERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLE 340
Query: 122 KAEDI---FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
K +I F M R + P + +Y +++ + + L ++K M TPD Y+
Sbjct: 341 KPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYN 400
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPN 208
++ID L + G + A E EM RGL P
Sbjct: 401 AVIDALIQKGMLDMAREYEEEMIERGLSPR 430
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 74/261 (28%)
Query: 158 ALNLFKQMHTEN-ITPDVVTYSSLIDGLCKSGRISDAWELVNEM--HSRGLPPNV----- 209
AL F + E+ T++ +ID L K +W L+N M ++ +P +V
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123
Query: 210 ----------------------------ITYSSLLDALCKNHHVDNAISL---------- 231
++ +L+DALC++ HV A L
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNG 183
Query: 232 ----------------------------IKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
KKM +G+ D+++Y+I +D +CK G+ A
Sbjct: 184 FSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKA 243
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
++++++ + LDV Y +I + + + + +M + GC P+ T+ II
Sbjct: 244 VKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 303
Query: 324 LFQEGDNDKAEKLLRQMIARG 344
L ++G A ++L +M RG
Sbjct: 304 LCEDGRMRDAYRMLDEMPKRG 324
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 156/362 (43%), Gaps = 45/362 (12%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
I+ SLCK DA+ + E+ PD + Y + F + G L E +L +
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG-------------------------- 98
+ P + + L ++ EAK V V++ G
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVE 348
Query: 99 --------GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 150
G+ P + T S L C ++ + + ++ ++QSYS+MI+ LC
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
K V ++ ++M E + PDV Y++LI+ CK+ I A +L +EM G N+
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
TY+ L+ L + + ++ L KM +GI PD Y L++GLCK +++ A EVF+
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKC 528
Query: 271 LIKGY-NLDVRTYTIMINGLCKDGLFDEALALMSK---MEDNG-------CTPDAVTYEI 319
+ + + + R + + LC +G EA L+ + +E G C DA EI
Sbjct: 529 MERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLEHTGAHVVLLKCVADAKEVEI 588
Query: 320 II 321
I
Sbjct: 589 GI 590
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 170/377 (45%), Gaps = 41/377 (10%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++ L D + A L+ +M K +S + + + I FC + + + L++++ +
Sbjct: 158 LLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKAN 217
Query: 65 INPDVYTFSILV-DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
+N + ++L+ +LCK + +A +L + KPD + Y + + + + + +
Sbjct: 218 LNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYER 277
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMV---------------------------- 155
+ + ++ +AP Y I L K +
Sbjct: 278 QVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGS 337
Query: 156 ------DDALNLFKQMHTENITPDVVTYSSLIDGLC---KSGRISDAWELVNEMHSRGLP 206
D A+ M + P + T S L LC KS + A+EL++ S+G
Sbjct: 338 VSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLS---SKGYF 394
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
+ +YS ++ LCK V + + +++MK +G+ PDV Y L++ CK ++ A+++
Sbjct: 395 SELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKL 454
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+ ++ ++G +++ TY ++I L ++G +E+L L KM + G PD Y +I L +
Sbjct: 455 WDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCK 514
Query: 327 EGDNDKAEKLLRQMIAR 343
E + A ++ R+ + R
Sbjct: 515 ETKIEAAMEVFRKCMER 531
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I++ CK +++ A L+ EM + ++ TY LI G+ +E++ L ++M
Sbjct: 434 LYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKM 493
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
+ + I PD + L++ LCKE K++ A V
Sbjct: 494 LERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 6/218 (2%)
Query: 116 LVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
L+N + A FN + + D SY + L + LFKQ+ + I D
Sbjct: 58 LLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDS 117
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
Y SLID L + A+ ++ E S G + + LL L + D A L K
Sbjct: 118 SVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVK 177
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI---MINGLCK 291
M+H+G+ + + + + C+ + + +K NL++ I +++ LCK
Sbjct: 178 MRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDE--VKKANLNINGSIIALLILHSLCK 235
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+A ++ ++ + C PD + Y +I A G+
Sbjct: 236 CSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGN 273
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 166/340 (48%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+T+I K K+ + + +Y + KRI P+ +T +I C G+LKE V LL+++
Sbjct: 203 NTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICG 262
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K P V + LV + +E +++E+ ++L ++ D + YS ++ ++
Sbjct: 263 KRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVS 322
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A +F+ M + + + Y++ + C+ V +A L +M ++P T++ LI
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G + G E M +RGL P+ ++ ++ ++ K +V+ A ++ K +G +P
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
D +TY+ L+ G +G + A ++F ++ + + + +I GLC G + +
Sbjct: 443 DEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYL 502
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
M+ P+A Y+ +I A + GD A+++ +MI+
Sbjct: 503 KIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS ++ + K+ + A ++ EML + S + YT + C G +KEA LL++M
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++P TF+ L+ + G ++ VM+ G P ++ ++ + VN
Sbjct: 367 ESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVN 426
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A +I PD +YS +I G + +D AL LF +M ++P + SLI
Sbjct: 427 RANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLI 486
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
GLC G++ + + M R + PN Y +L+ A K NA + +M
Sbjct: 487 VGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 123/237 (51%)
Query: 110 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 169
L+ Y + + D+F + V + + +I+ K K+ D +++ +
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKR 229
Query: 170 ITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 229
I P+ +T +I LCK GR+ + +L++ + + P+VI +SL+ + + ++ ++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 230 SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
SL+K++ + ++ D Y+I++ K G L A++VF ++L +G++ + YT+ +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 290 CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
C+ G EA L+S+ME++G +P T+ +I + G +K + M+ RGL+
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 124/281 (44%)
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K I P+ T I++ LCKEG++KE ++L + P V+ +SL+ + +
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+ + + + D YSI++ K + A +F +M + + Y+ +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
C+ G + +A L++EM G+ P T++ L+ + + + + M +G++P
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+ ++ + K + A E+ + KG+ D TY+ +I G + D+AL L
Sbjct: 408 SCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLF 467
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+ME +P + +I L G + EK L+ M R
Sbjct: 468 YEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR 508
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ + C+ V +A L SEM +SP T+ LI GF G ++ + M
Sbjct: 341 VYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVM 400
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + + P F+ +V ++ K V A +L I G PD TYS L+ G+ N++
Sbjct: 401 VTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDI 460
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
++A +F M +++P + + +I GLC V+ K M I P+ Y +L
Sbjct: 461 DQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDAL 520
Query: 181 IDGLCKSGRISDAWELVNEMHS 202
I K G ++A + NEM S
Sbjct: 521 IKAFQKIGDKTNADRVYNEMIS 542
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 157/291 (53%), Gaps = 27/291 (9%)
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
L+ + S P V L+ LCK GK+ EA+ + G + DVVT++ ++ GY
Sbjct: 33 LVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARK----LFDGLPERDVVTWTHVITGYI 88
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
+ ++ +A ++F+ R++ +V +++ M++G + K + A LF++M N VV
Sbjct: 89 KLGDMREARELFD---RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN----VV 141
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
+++++IDG +SGRI A EL +EM R N+++++S++ AL + +D A++L ++M
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
+ DV ++T ++DGL K G++ +A+ +F + + ++ ++ MI G ++
Sbjct: 198 PRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRI 249
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
DEA L M + D ++ +I + + +KA L +M + ++
Sbjct: 250 DEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 171/320 (53%), Gaps = 32/320 (10%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
+I LCK + +A L+ + + DVVT+T +I+G+ +G ++EA L +++ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARELFDRVDSRK 107
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+V T++ +V + ++ A+ + M + +VV++++++DGY ++KA
Sbjct: 108 ---NVVTWTAMVSGYLRSKQLSIAEMLFQEM----PERNVVSWNTMIDGYAQSGRIDKAL 160
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
++F+ M ++ S++ M+ L + +D+A+NLF++M DVV++++++DGL
Sbjct: 161 ELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGL 212
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
K+G++ +A L + M R N+I++++++ +N+ +D A L + M + D
Sbjct: 213 AKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPER----DF 264
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
++ ++ G + + A +F + K +V ++T MI G ++ +EAL + SK
Sbjct: 265 ASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSK 320
Query: 305 M-EDNGCTPDAVTYEIIIYA 323
M D P+ TY I+ A
Sbjct: 321 MLRDGSVKPNVGTYVSILSA 340
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 169/342 (49%), Gaps = 32/342 (9%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S++ S D+ V +NL + + P V LI C VG++ EA L + +
Sbjct: 16 SSVFPSSDNDRSVQ-LFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPE 74
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ DV T++ ++ K G ++EA+ + + + +VVT+++++ GY +++
Sbjct: 75 R----DVVTWTHVITGYIKLGDMREARELFD---RVDSRKNVVTWTAMVSGYLRSKQLSI 127
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
AE +F M +V S++ MI+G + +D AL LF +M NI V+++S++
Sbjct: 128 AEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVK 179
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
L + GRI +A L M R +V+++++++D L KN VD A L M + I+
Sbjct: 180 ALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII- 234
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
++ ++ G + R+ +A ++FQ + + D ++ MI G ++ ++A L
Sbjct: 235 ---SWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLF 287
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
+M + + +++ +I + +N++A + +M+ G
Sbjct: 288 DRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 150/342 (43%), Gaps = 45/342 (13%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I ++ +++A L+ M + D ++ T+I+GF ++ +A GL ++M
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMP 291
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEV 120
K +V +++ ++ + + +EA NV + M++ G KP+V TY S++ + +
Sbjct: 292 EK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ + I +++ + S ++N K + A +F D+++++S+
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV--CQRDLISWNSM 405
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G +A E+ N+M G P+ +TY +LL A V+ + K +
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 241 LP-DVYTYTILLDGLCKGGRLKD--------------------------------AQEVF 267
LP YT L+D + GRLKD A+EV
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+ +L G + D TY +M N +G +EA + KM++ G
Sbjct: 526 KKVLETGSD-DAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 9/317 (2%)
Query: 28 KRISPD---VVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGK 84
KR+ PD + L+ C + +A + + + PD+ TF+IL+ K
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGW----K 225
Query: 85 VKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
E +KG G KPDVVTY+SL+D YC E+ KA + + M E PDV +Y+
Sbjct: 226 SSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYT 285
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+I GL I D A + K+M PDV Y++ I C + R+ DA +LV+EM +
Sbjct: 286 TVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
GL PN TY+ L + + + L +M LP+ + L+ + ++ A
Sbjct: 346 GLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMA 405
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
+++D+++KG+ ++++ LC +EA + +M + G P V+++ I
Sbjct: 406 MRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLL 465
Query: 324 LFQEGDNDKAEKLLRQM 340
+ +D+ L+++M
Sbjct: 466 MELANKHDEVNNLIQKM 482
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 124/239 (51%), Gaps = 4/239 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ +LC++K + DA N+Y L + PD+ T+ L+SG+ +EA +M
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + PDV T++ L+D CK+ ++++A ++ M + E PDV+TY++++ G L+ + +
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
KA ++ M PDV +Y+ I C + + DA L +M + ++P+ TY+
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
L + + +WEL M PN + L+ ++ VD A+ L + M +G
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 124/243 (51%), Gaps = 4/243 (1%)
Query: 103 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 162
D +++L+ C + A ++++++ + + PD+Q+++I+++G K ++A F
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 163 KQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 222
++M + + PDVVTY+SLID CK I A++L+++M P+VITY++++ L
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 223 HHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
D A ++K+MK G PDV Y + C RL DA ++ +++ KG + + TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
+ L + L +M N C P+ + +I + D A +L M+
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 343 RGL 345
+G
Sbjct: 415 KGF 417
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 4/236 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++ID CKD+ + AY L +M + +PDV+TYTT+I G ++GQ +A +L +M
Sbjct: 249 YNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMK 308
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PDV ++ + C ++ +A ++ M+K G P+ TY+ L N++
Sbjct: 309 EYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLG 368
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
++ +++ M E P+ QS +I + + VD A+ L++ M + + L+
Sbjct: 369 RSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLL 428
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYS--SLLDALCKNHHVDNAISLIKKM 235
D LC ++ +A + + EM +G P+ +++ LL L H D +LI+KM
Sbjct: 429 DLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKH--DEVNNLIQKM 482
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 183/377 (48%), Gaps = 54/377 (14%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ + +I+ K L+NDA+ L+ +M + +V+++TT+IS + ++A+ LL M
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ ++ P+VYT+S ++ + + + + + +IK G + DV S+L+D + + E
Sbjct: 154 LRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM--------------- 165
A +F+ M + D ++ +I G + D AL LFK+M
Sbjct: 211 EDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 166 ------------------HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
H D++ ++L+D CK G + DA + N+M R
Sbjct: 267 LRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER---- 322
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+VIT+S+++ L +N + A+ L ++MK G P+ T +L G L+D F
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 268 QDLLIKGYNLD-VRT-YTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
+ + K Y +D VR Y MI+ L K G D+A+ L+++ME C PDAVT+ ++ A
Sbjct: 383 RSMK-KLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLLGACR 438
Query: 326 QEGDNDKAEKLLRQMIA 342
+ + AE +++IA
Sbjct: 439 VQRNMVLAEYAAKKVIA 455
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 156/396 (39%), Gaps = 80/396 (20%)
Query: 13 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGF---CIVGQLKEAVGLLNQMVVKSINPDV 69
K V L+ ++ R S T L+S F C L A+ ++ + + D
Sbjct: 2 KSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADS 61
Query: 70 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 129
T+S L+ V E + + G +P + + L++ Y N +N A +F+
Sbjct: 62 ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS---------- 179
M + +V S++ MI+ K K+ AL L M +N+ P+V TYSS
Sbjct: 122 MPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177
Query: 180 ----------------------LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
LID K G DA + +EM + + I ++S++
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIG 233
Query: 218 ALCKNHHVDNAISLIKKMKHQGILPDVYTYT----------------------------- 248
+N D A+ L K+MK G + + T T
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL 293
Query: 249 ----ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
L+D CK G L+DA VF + + DV T++ MI+GL ++G EAL L +
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFER 349
Query: 305 MEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
M+ +G P+ +T +++A G + R M
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 153/353 (43%), Gaps = 29/353 (8%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S +ID K DA +++ EM ++ D + + ++I GF + A+ L +M
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR 253
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ T + ++ A ++ ++K + D++ ++L+D YC +
Sbjct: 254 AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLED 311
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A +FN M DV ++S MI+GL + +AL LF++M + P+ +T ++
Sbjct: 312 ALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 183 GLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+G + D W M G+ P Y ++D L K +D+A+ L+ +M+ +
Sbjct: 368 ACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE--- 424
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD T+ LL G C+ R E +I D TYT++ N +D +
Sbjct: 425 PDAVTWRTLL-GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEI 483
Query: 302 MSKMEDN------GCTPDAVTYEIIIYALFQEGDNDKAE-----KLLRQMIAR 343
++M D GC+ V +I + + GDN + K L Q+I R
Sbjct: 484 RTRMRDRGIKKEPGCSWIEVNKQIHAFII---GDNSHPQIVEVSKKLNQLIHR 533
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 8/248 (3%)
Query: 28 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKE 87
+R P+VVTY L+ F G++ + L + + ++PDVYTF+ ++DA K G +KE
Sbjct: 202 ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 88 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
+ VL M KPD++T++ L+D Y E K E F ++ R + P + +++ MI
Sbjct: 262 MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI--DGLCKSGRISDAWELVNEMHSRGL 205
K +M+D A +FK+M+ N P +TY +I G C G +S A E+ E+
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDR 379
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
T +++L+ C+N A L + PD TY L K D +E
Sbjct: 380 VLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA----DMKE 435
Query: 266 VFQDLLIK 273
Q L+ K
Sbjct: 436 QVQILMKK 443
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 151/322 (46%), Gaps = 9/322 (2%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDA-LCKEGKVKEAKN 90
PD Y+ LIS GQ + A+ L ++M PD ++ L+ A L K K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 91 VLAVM--IKGGEK--PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
V + +KG E+ P+VVTY+ L+ + +V++ +F + ++PDV +++ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
+ K M+ + + +M + PD++T++ LID K + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT--ILLDGLCKGGRLKDAQ 264
P + T++S++ K +D A + KKM +P TY I++ G C G + A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
E+F+++ L T M+ C++GL+ EA L PDA TY+ + A
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 325 FQEGDNDKAEKLLRQMIARGLL 346
+ ++ + L+++M G++
Sbjct: 429 TKADMKEQVQILMKKMEKDGIV 450
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 5/318 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC----IVGQLKEAVGL 56
+YS +I + K A L+SEM PD Y LI+ L++ G
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGY 194
Query: 57 LNQMV-VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
L++M ++ P+V T++IL+ A + GKV + + + PDV T++ +MD Y
Sbjct: 195 LDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYG 254
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
+ + E + M E PD+ +++++I+ K + + FK + P +
Sbjct: 255 KNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP 314
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
T++S+I K+ I A + +M+ P+ ITY ++ V A + +++
Sbjct: 315 TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
+ T +L+ C+ G +A ++F + + D TY + K +
Sbjct: 375 GESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMK 434
Query: 296 DEALALMSKMEDNGCTPD 313
++ LM KME +G P+
Sbjct: 435 EQVQILMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 8/248 (3%)
Query: 28 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKE 87
+R P+VVTY L+ F G++ + L + + ++PDVYTF+ ++DA K G +KE
Sbjct: 202 ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKE 261
Query: 88 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
+ VL M KPD++T++ L+D Y E K E F ++ R + P + +++ MI
Sbjct: 262 MEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII 321
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI--DGLCKSGRISDAWELVNEMHSRGL 205
K +M+D A +FK+M+ N P +TY +I G C G +S A E+ E+
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDR 379
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
T +++L+ C+N A L + PD TY L K D +E
Sbjct: 380 VLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA----DMKE 435
Query: 266 VFQDLLIK 273
Q L+ K
Sbjct: 436 QVQILMKK 443
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 151/322 (46%), Gaps = 9/322 (2%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDA-LCKEGKVKEAKN 90
PD Y+ LIS GQ + A+ L ++M PD ++ L+ A L K K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 91 VLAVM--IKGGEK--PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
V + +KG E+ P+VVTY+ L+ + +V++ +F + ++PDV +++ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
+ K M+ + + +M + PD++T++ LID K + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT--ILLDGLCKGGRLKDAQ 264
P + T++S++ K +D A + KKM +P TY I++ G C G + A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
E+F+++ L T M+ C++GL+ EA L PDA TY+ + A
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 325 FQEGDNDKAEKLLRQMIARGLL 346
+ ++ + L+++M G++
Sbjct: 429 TKADMKEQVQILMKKMEKDGIV 450
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 128/261 (49%), Gaps = 6/261 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++ + + V+ L+ ++ +SPDV T+ ++ + G +KE +L +M
Sbjct: 211 YNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMR 270
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD+ TF++L+D+ K+ + ++ + +++ EKP + T++S++ Y ++
Sbjct: 271 SNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 122 KAEDIFNTMTRMELAPDVQSYS--IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
KAE +F M M P +Y IM+ G C V A +F+++ + T ++
Sbjct: 331 KAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNA 388
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+++ C++G +A +L + + + P+ TY L A K + L+KKM+ G
Sbjct: 389 MLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Query: 240 ILPDVYTYTILLDGLCKGGRL 260
I+P+ + L+ G RL
Sbjct: 449 IVPNKRFFLEALEVF--GSRL 467
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 124/233 (53%), Gaps = 1/233 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++ ++++ K + ++ E+ K I PDV +Y TLI G C G EAV L++++
Sbjct: 144 FNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEI 203
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + PD TF+IL+ +GK +E + + A M++ K D+ +Y++ + G + N+
Sbjct: 204 ENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKS 263
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ +F+ + EL PDV +++ MI G +D+A+ +K++ P ++SL
Sbjct: 264 EEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSL 323
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
+ +CK+G + A+EL E+ ++ L + ++DAL K D A +++
Sbjct: 324 LPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 108 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+ +++ Y V A+ +F+ M S++ ++N K D +FK++
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 168 E-NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
+ +I PDV +Y++LI GLC G ++A L++E+ ++GL P+ IT++ LL +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 227 NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
+ +M + + D+ +Y L GL + ++ +F L DV T+T MI
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 287 NGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G +G DEA+ ++E NGC P + ++ A+ + GD + A +L +++ A+ LL
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 136/268 (50%), Gaps = 3/268 (1%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV-GLLNQMV 61
+ II+ + + +A ++ EM + +++ L++ C+ + + V G+ ++
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNA-CVNSKKFDLVEGIFKELP 168
Query: 62 VK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K SI PDV +++ L+ LC +G EA ++ + G KPD +T++ L+ +
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ E I+ M + D++SY+ + GL ++ ++LF ++ + PDV T++++
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I G G++ +A E+ G P ++SLL A+CK +++A L K++ + +
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQ 268
L D ++D L KG + +A+E+ +
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 127/266 (47%), Gaps = 13/266 (4%)
Query: 40 LISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCK-------EGKVKEAKNVL 92
+I+ + VG + A + ++M ++ +F+ L++A EG KE L
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
++ +PDV +Y++L+ G C +A + + + L PD +++I+++
Sbjct: 172 SI------EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTK 225
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
++ ++ +M +N+ D+ +Y++ + GL + + L +++ L P+V T+
Sbjct: 226 GKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTF 285
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
++++ +D AI+ K+++ G P + + LL +CK G L+ A E+ +++
Sbjct: 286 TAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFA 345
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEA 298
K +D +++ L K DEA
Sbjct: 346 KRLLVDEAVLQEVVDALVKGSKQDEA 371
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 138/265 (52%), Gaps = 1/265 (0%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ II K + +A ++ EM + V+++ L+S + + + L N++
Sbjct: 113 ARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPG 172
Query: 63 K-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K SI PD+ +++ L+ ALC++ + EA +L + G KPD+VT+++L+ L +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
E+I+ M +A D+++Y+ + GL + +NLF ++ + PDV +++++I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G G++ +A E+ G P+ T++ LL A+CK ++AI L K+ + L
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEV 266
T L+D L KG + ++A+E+
Sbjct: 353 VGQTTLQQLVDELVKGSKREEAEEI 377
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 135/259 (52%), Gaps = 1/259 (0%)
Query: 81 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT-RMELAPDV 139
K G + A+ V M K V+++++L+ Y L + + E++FN + ++ + PD+
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 140 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNE 199
SY+ +I LC+ + +A+ L ++ + + PD+VT+++L+ G+ E+ +
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 200 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGR 259
M + + ++ TY++ L L ++L ++K G+ PDV+++ ++ G G+
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 260 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEI 319
+ +A+ +++++ GY D T+ +++ +CK G F+ A+ L + T +
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQ 360
Query: 320 IIYALFQEGDNDKAEKLLR 338
++ L + ++AE++++
Sbjct: 361 LVDELVKGSKREEAEEIVK 379
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 21 LYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDAL 79
L++E+ K I PD+V+Y TLI C L EAV LL+++ K + PD+ TF+ L+ +
Sbjct: 166 LFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSS 225
Query: 80 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE--DIFNTMTRMELAP 137
+G+ + + + A M++ D+ TY++ + G L NE E ++F + L P
Sbjct: 226 YLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG--LANEAKSKELVNLFGELKASGLKP 283
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
DV S++ MI G +D+A +K++ PD T++ L+ +CK+G A EL
Sbjct: 284 DVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
E S+ T L+D L K + A ++K K L
Sbjct: 344 KETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFL 387
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 117/225 (52%), Gaps = 1/225 (0%)
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSLI 181
A+ +F M + V S++ +++ K D LF ++ + +I PD+V+Y++LI
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 187
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
LC+ + +A L++E+ ++GL P+++T+++LL + + + KM + +
Sbjct: 188 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVA 247
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
D+ TY L GL + K+ +F +L G DV ++ MI G +G DEA A
Sbjct: 248 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAW 307
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ +G PD T+ +++ A+ + GD + A +L ++ ++ L
Sbjct: 308 YKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 107/195 (54%), Gaps = 1/195 (0%)
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GLPPNV 209
K M ++A +F++M + V+++++L+ S + EL NE+ + + P++
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
++Y++L+ ALC+ + A++L+ +++++G+ PD+ T+ LL G+ + +E++
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
++ K +D+RTY + GL + E + L +++ +G PD ++ +I EG
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 330 NDKAEKLLRQMIARG 344
D+AE ++++ G
Sbjct: 301 MDEAEAWYKEIVKHG 315
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 2/343 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM- 60
Y+ + L K + A L+ ML++ + P + YT+LIS + L +A L M
Sbjct: 147 YTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMK 206
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V PDV+TF++L+ CK G+ K+++ M G VTY++++DGY
Sbjct: 207 SVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMF 266
Query: 121 NKAEDIFNTMTR-MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ E + M + PDV + + +I + + + + + + PD+ T++
Sbjct: 267 EEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNI 326
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LI K+G +++ M R +TY+ +++ K ++ + +KMK+QG
Sbjct: 327 LILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQG 386
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ P+ TY L++ K G + V + ++ LD + +IN + G
Sbjct: 387 VKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMK 446
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
L +ME+ C PD +T+ +I G D ++L +QMI+
Sbjct: 447 ELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMIS 489
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 153/309 (49%), Gaps = 6/309 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS---PDVVTYTTLISGFCIVGQLKEAVGLL 57
+Y+++I K +L++ A++ M K +S PDV T+T LIS C +G+ ++
Sbjct: 181 VYTSLISVYGKSELLDKAFSTLEYM--KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 58 NQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK-PDVVTYSSLMDGYCL 116
+M + T++ ++D K G +E ++VLA MI+ G+ PDV T +S++ Y
Sbjct: 239 LEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGN 298
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
+ K E ++ M + PD+ +++I+I K M ++ M + VT
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVT 358
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y+ +I+ K+GRI ++ +M +G+ PN ITY SL++A K V S+++++
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 418
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+ ++ D + +++ + G L +E++ + + D T+ MI G+FD
Sbjct: 419 NSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFD 478
Query: 297 EALALMSKM 305
L +M
Sbjct: 479 AVQELEKQM 487
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 76 VDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
+D KE + + A + ++ K +P TY+ L + ++A +F M
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-ENITPDVVTYSSLIDGLCKSGRISDA 193
L P + Y+ +I+ K +++D A + + M + + PDV T++ LI CK GR
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 194 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG-ILPDVYTYTILLD 252
+V EM G+ + +TY++++D K + S++ M G LPDV T ++
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIG 294
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
G ++ + + + G D+ T+ I+I K G++ + ++M ME +
Sbjct: 295 SYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSL 354
Query: 313 DAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
VTY I+I + G +K + + R+M +G+
Sbjct: 355 TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGV 387
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 150/327 (45%), Gaps = 38/327 (11%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ--LKEAVGLLNQM 60
++I+ L K+ ++ L+ +M + PDVVTY TL++G CI + +A+ L+ ++
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAG-CIKVKNGYPKAIELIGEL 228
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
I D + ++ G+ +EA+N + M G P++ YSSL++ Y +
Sbjct: 229 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA+++ M + L P+ +M+ L K+ +
Sbjct: 289 KKADELMTEMKSIGLVPN----KVMMTTLLKVYI-------------------------- 318
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
K G + EL++E+ S G N + Y L+D L K ++ A S+ MK +G+
Sbjct: 319 -----KGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D Y +I++ LC+ R K+A+E+ +D D+ M+ C+ G + +
Sbjct: 374 RSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMR 433
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQE 327
+M KM++ +PD T+ I+I +E
Sbjct: 434 MMKKMDEQAVSPDYNTFHILIKYFIKE 460
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 2/309 (0%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
V TY++ I F + +A+ + + +S +VY + ++ L K GK+ +
Sbjct: 131 SVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLV-NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
M + G KPDVVTY++L+ G V N KA ++ + + D Y ++
Sbjct: 190 DQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICAS 249
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
++A N +QM E +P++ YSSL++ G A EL+ EM S GL PN +
Sbjct: 250 NGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVM 309
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
++LL K D + L+ +++ G + Y +L+DGL K G+L++A+ +F D+
Sbjct: 310 MTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMK 369
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
KG D +IMI+ LC+ F EA L E D V ++ A + G+ +
Sbjct: 370 GKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEME 429
Query: 332 KAEKLLRQM 340
+++++M
Sbjct: 430 SVMRMMKKM 438
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 130/264 (49%), Gaps = 3/264 (1%)
Query: 83 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 142
G+ ++ + M + G K V TYSS + + V+KA +I+ ++ +V
Sbjct: 112 GRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYIC 169
Query: 143 SIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK-SGRISDAWELVNEMH 201
+ +++ L K +D + LF QM + + PDVVTY++L+ G K A EL+ E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 202 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
G+ + + Y ++L N + A + I++MK +G P++Y Y+ LL+ G K
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
A E+ ++ G + T ++ K GLFD + L+S++E G + + Y +++
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 322 YALFQEGDNDKAEKLLRQMIARGL 345
L + G ++A + M +G+
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGV 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 99 GEKPDVVTYS-SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 157
E P +S S + ++EV ++ D +++ R+ VQ ++++ D
Sbjct: 57 AEAPRSKRHSNSYLARKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQD 116
Query: 158 ALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
+ LF+ M V TYSS I + +S A E+ + NV +S+L
Sbjct: 117 LIQLFEWMQQHGKI-SVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILS 174
Query: 218 ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL--CKGGRLKDAQEVFQDLLIKGY 275
L KN +D+ I L +MK G+ PDV TY LL G K G K A E+ +L G
Sbjct: 175 CLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK-AIELIGELPHNGI 233
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEK 335
+D Y ++ +G +EA + +M+ G +P+ Y ++ + +GD KA++
Sbjct: 234 QMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293
Query: 336 LLRQMIARGLL 346
L+ +M + GL+
Sbjct: 294 LMTEMKSIGLV 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 154/366 (42%), Gaps = 42/366 (11%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY T++ + +A N +M + SP++ Y++L++ + G K+A L+ +M
Sbjct: 239 MYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEM 298
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ P+ + L+ K G ++ +L+ + G + + Y LMDG ++
Sbjct: 299 KSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKL 358
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A IF+ M + D + SIMI+ LC+ K +A L + T D+V +++
Sbjct: 359 EEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTM 418
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPP-----------------NVITYSSLLDALCKNH 223
+ C++G + ++ +M + + P +++ Y + LD K H
Sbjct: 419 LCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGH 478
Query: 224 HVDNAI--SLI---KKMKHQGILPDVYT-------------YTILLDGLCKGGRLKDAQE 265
++ + SLI K++ Q VY + +L L +G LKDA
Sbjct: 479 RLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYI 538
Query: 266 VFQD--LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
V +D +I L MI+G L ++ L + + +G D V +EI I
Sbjct: 539 VVKDNAKMISQPTLKKFGRAFMISG--NINLVNDVLKV---LHGSGHKIDQVQFEIAISR 593
Query: 324 LFQEGD 329
+ D
Sbjct: 594 YISQPD 599
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 178/377 (47%), Gaps = 48/377 (12%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+++++ CK L+ A ++ M K DVVT+ +ISG+ G +++A+ + M +
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRL 368
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ + D T + L+ A + +K K V I+ + D+V S++MD Y +
Sbjct: 369 EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A+ +F++ D+ ++ ++ + + +AL LF M E + P+V+T++ +I
Sbjct: 429 AKKVFDSTVE----KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIIL 484
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
L ++G++ +A ++ +M S G+ PN+I+++++++ + +N + AI ++KM+ G+ P
Sbjct: 485 SLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 243 DVYTYTI------------------------------------LLDGLCKGGRLKDAQEV 266
+ ++ T+ L+D K G + A++V
Sbjct: 545 NAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
F L L MI+ G EA+AL +E G PD +T ++ A
Sbjct: 605 FGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNH 660
Query: 327 EGDNDKAEKLLRQMIAR 343
GD ++A ++ ++++
Sbjct: 661 AGDINQAIEIFTDIVSK 677
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 170/345 (49%), Gaps = 16/345 (4%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPD--VVTYTTLISGFCIVGQLKEAVGLLNQM 60
S++ D K +++DA ++ E+ PD V + L+ G+ G+ +EA+ L + M
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEI------PDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + P T S + A G V+E K A+ I G + D + +SL++ YC V +
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
AE +F+ M DV +++++I+G + +V+DA+ + + M E + D VT ++L
Sbjct: 326 EYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ ++ + E+ +++ S+++D K + +A KK+ +
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA----KKVFDSTV 437
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
D+ + LL + G +A +F + ++G +V T+ ++I L ++G DEA
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M+ +G P+ +++ ++ + Q G +++A LR+M GL
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 143/337 (42%), Gaps = 53/337 (15%)
Query: 31 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS--INPDVYTFSILVDALCKEGKVKEA 88
SP +Y +S C G++KEA+ L+ +M ++ I P++Y ++ E +
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIY--GEILQGCVYERDLSTG 89
Query: 89 KNVLAVMIKGGEKPDVVTY--SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
K + A ++K G+ Y + L+ Y + + AE +F+ + +V S++ +I
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLR----VRNVFSWAAII 145
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPD--------------------------------- 173
C+I + + AL F +M I PD
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 174 --VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
V SSL D K G + DA ++ +E+ R N + +++L+ +N + AI L
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRL 261
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
M+ QG+ P T + L G +++ ++ ++ G LD T ++N CK
Sbjct: 262 FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK 321
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
GL + A + +M + D VT+ +II Q+G
Sbjct: 322 VGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQG 354
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 147/346 (42%), Gaps = 45/346 (13%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++T++ + + L +A L+ M + + P+V+T+ +I GQ+ EA + QM
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY------------- 107
I P++ +++ +++ + + G +EA L M + G +P+ +
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Query: 108 -----------------------SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
+SL+D Y ++NKAE +F + EL +
Sbjct: 563 HIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS----NA 618
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHS-R 203
MI+ + +A+ L++ + + PD +T ++++ +G I+ A E+ ++ S R
Sbjct: 619 MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKR 678
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
+ P + Y ++D L + A+ LI++M + PD L+ C R +
Sbjct: 679 SMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK---PDARMIQSLVAS-CNKQRKTEL 734
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+ L++ + Y + N +G +DE + + M+ G
Sbjct: 735 VDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKG 780
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 168/375 (44%), Gaps = 38/375 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+ID+ K + +A + ML + I P VT+ T+I + GQL E L+ M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD T++IL+ K ++ A M G KPD V+Y +L+ + + + V
Sbjct: 361 LHCA-PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSL 180
+AE + M + D + S + + +M++ + + FK+ H N++ + YS+
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE--GYSAN 477
Query: 181 IDGLCKSGRISDA----------------------------------WELVNEMHSRGLP 206
ID + G +S+A EL M S G+
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P+ TY++L+ L ++KM+ G + D Y ++ K G+L A+EV
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
+++++ DV Y ++IN G +A++ + M++ G ++V Y +I +
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 327 EGDNDKAEKLLRQMI 341
G D+AE + R+++
Sbjct: 658 VGYLDEAEAIYRKLL 672
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 164/353 (46%), Gaps = 13/353 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLY--SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
YS ID+ + +++A ++ + + KR V+ Y +I + I ++A L
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKRT---VIEYNVMIKAYGISKSCEKACELFES 530
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M+ + PD T++ LV L + + L M + G D + Y +++ + + +
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+N AE+++ M + PDV Y ++IN V A++ + M I + V Y+S
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 180 LIDGLCKSGRISDAWELVNEMH---SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
LI K G + +A + ++ ++ P+V T + +++ + V A ++ MK
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+G + +T+ ++L K GR ++A ++ + + D +Y ++ DG F
Sbjct: 711 QRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFK 769
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA----EKLLRQMIARGL 345
EA+ +M +G PD T++ + L + G + KA E++ ++ I RGL
Sbjct: 770 EAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGL 822
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 140/301 (46%), Gaps = 9/301 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T++ L + + +M D + Y +IS F +GQL A + +MV
Sbjct: 543 YNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMV 602
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+I PDV + +L++A G V++A + + M + G + V Y+SL+ Y V ++
Sbjct: 603 EYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLD 662
Query: 122 KAEDIFNTMTR---MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+AE I+ + + PDV + + MIN + MV A +F M + T++
Sbjct: 663 EAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFA 721
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
++ K+GR +A ++ +M + + ++Y+S+L + A+ K+M
Sbjct: 722 MMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSS 781
Query: 239 GILPDVYTYTILLDGLCKGGRLKDA----QEVFQDLLIKGYNLDVRTYTIMIN-GLCKDG 293
GI PD T+ L L K G K A +E+ + + +G L + T + ++ G C D
Sbjct: 782 GIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGDCVDE 841
Query: 294 L 294
L
Sbjct: 842 L 842
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 157/386 (40%), Gaps = 53/386 (13%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
I+ CK + V +L+ EM+ K I P TY TLI + G A+ L +M
Sbjct: 196 ILGKACKWRYVQ---SLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIG 252
Query: 65 INPD-----------------------------------------VYTFSILVDALCKEG 83
+ PD YT++ ++D K G
Sbjct: 253 MQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSG 312
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
++KEA M++ G P VT+++++ Y ++ + + TM ++ APD ++Y+
Sbjct: 313 QIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYN 371
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
I+I+ K ++ A FK+M + + PD V+Y +L+ + +A L+ EM
Sbjct: 372 ILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD 431
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
+ + T S+L + ++ + S K+ G + Y+ +D + G L +A
Sbjct: 432 NVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEA 490
Query: 264 QEVFQDLLIKGYNLDVRT---YTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+ VF I ++ RT Y +MI ++A L M G TPD TY +
Sbjct: 491 ERVF----ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 546
Query: 321 IYALFQEGDNDKAEKLLRQMIARGLL 346
+ L K L +M G +
Sbjct: 547 VQILASADMPHKGRCYLEKMRETGYV 572
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 7/255 (2%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
+V ++I++ L K K + +++ MI+ G KP TY +L+D Y A
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV------VTYSSLI 181
M+++ + PD + I++ K + A FK+ + D TY+++I
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
D KSG+I +A E M G+ P +T+++++ N + SL+K MK
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CA 364
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY IL+ K ++ A F+++ G D +Y ++ + +EA L
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 302 MSKMEDNGCTPDAVT 316
+++M+D+ D T
Sbjct: 425 IAEMDDDNVEIDEYT 439
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
EL EM RGL N +TY++L+ L + D A + K+M G+ PD+ TY ILLDGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 255 CKGGRLK---------DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
CK G+L+ D ++F L +KG +V TYT MI+G CK G +EA L KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+++G PD+ TY +I A ++GD + +L+++M
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
++F M++ L + +Y+ +I GL + D A +FK+M ++ + PD++TY+ L+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 185 CK---------SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
CK +G++ D W+L + +G+ PNV+TY++++ CK + A +L +KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
K G LPD TY L+ + G + E+ +++ + D TY ++ + + DG
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Query: 296 DEALALM 302
D+ M
Sbjct: 181 DKGFLEM 187
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
+ LF++M + + VTY++LI GL ++G A E+ EM S G+PP+++TY+ LLD
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 219 LCKNHHVDNAI---------SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
LCKN ++ A+ L + +G+ P+V TYT ++ G CK G ++A +F+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
+ G D TY +I +DG + L+ +M DA TY ++ + +G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT-DMLHDGR 179
Query: 330 NDKA 333
DK
Sbjct: 180 LDKG 183
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 9/173 (5%)
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
L +M + + + T++ L+ L + G A+ + M+ G PD++TY+ L+DG C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 116 ---------LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
+ +V D+F +++ + P+V +Y+ MI+G CK ++A LF++M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
+ PD TY++LI + G + + EL+ EM S + TY + D L
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 20 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDAL 79
L+ EM + + + VTYTTLI G G A + +MV + PD+ T++IL+D L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 80 CKE---------GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
CK GKV++ ++ + G KP+VVTY++++ G+C +A +F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 131 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRI 190
PD +Y+ +I + + L K+M + D TY + D + GR+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Query: 191 SDAW 194
+
Sbjct: 181 DKGF 184
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
+ L ++M +G++ + TYT L+ GL + G AQE+F++++ G D+ TY I+++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 289 LCKDGLFDEALALMSKMEDN----------GCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
LCK+G ++AL + K+ED G P+ VTY +I ++G ++A L R
Sbjct: 61 LCKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 339 QMIARGLL 346
+M G L
Sbjct: 120 KMKEDGPL 127
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV------- 54
Y+T+I L + + A ++ EM++ + PD++TY L+ G C G+L++A+
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVED 78
Query: 55 --GLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 112
L + +K + P+V T++ ++ CK+G +EA + M + G PD TY++L+
Sbjct: 79 GWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
Query: 113 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
+ + + ++ M A D +Y ++ +
Sbjct: 139 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 147/336 (43%), Gaps = 56/336 (16%)
Query: 25 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV---KSINPDVYTFSILVDALCK 81
+L K +PD YTTL+ G+ G++ + +L M ++ +PD T++ +V A
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 82 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR-MELAPDVQ 140
G + A+ VLA M + G + +TY+ L+ GYC ++++AED+ MT + PDV
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITP---------------------------- 172
SY+I+I+G I AL F +M T I P
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 173 --------DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
D++ ++ L++G C+ G I DA +V+ M G PNV TY SL + + +
Sbjct: 585 MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
+A+ L K++K + C + + + D D
Sbjct: 645 PGDALLLWKEIKER----------------CAVKKKEAPSDSSSDPAPPMLKPDEGLLDT 688
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+ + + F +AL +++ ME+NG P+ Y+ I
Sbjct: 689 LADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 159/379 (41%), Gaps = 82/379 (21%)
Query: 19 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDA 78
+ L+ EM PDV+TY +I VG+ + V +L +++ K I + T LV A
Sbjct: 256 WKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAA 315
Query: 79 LCKEGKVKEAKNVLAVMIKGGEKPDV-------------------------VTYSSLMDG 113
G ++ A+ ++ M + ++ D+ G
Sbjct: 316 YVGFGDLRTAERIVQAMRE--KRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSG 373
Query: 114 YCLVNEVNKAE--DIFNTMTRME-------------LAPDVQSYSIMINGLCKIKMVDDA 158
Y +EV++ D+F + APD + Y+ ++ G K V D
Sbjct: 374 YSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADT 433
Query: 159 LNLFKQMHTE---NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
+ + M + N PD VTY++++ +G + A +++ EM G+P N ITY+ L
Sbjct: 434 ARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVL 493
Query: 216 LDALCKNHHVDNAISLIKKM-KHQGILPDVYTYTILLDG--------------------- 253
L CK +D A L+++M + GI PDV +Y I++DG
Sbjct: 494 LKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRG 553
Query: 254 --------------LCKGGRLKDAQEVFQDLLI-KGYNLDVRTYTIMINGLCKDGLFDEA 298
G+ K A VF +++ +D+ + +++ G C+ GL ++A
Sbjct: 554 IAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDA 613
Query: 299 LALMSKMEDNGCTPDAVTY 317
++S+M++NG P+ TY
Sbjct: 614 QRVVSRMKENGFYPNVATY 632
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 21/235 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y+ ++ CK ++ A +L EM I PDVV+Y +I G ++ A+ N+M
Sbjct: 490 YNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEM 549
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNE 119
+ I P +++ L+ A G+ K A V M+ K D++ ++ L++GYC +
Sbjct: 550 RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL 609
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE----------- 168
+ A+ + + M P+V +Y + NG+ + + DAL L+K++
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSD 669
Query: 169 --------NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
+ PD +L D ++ A E++ M G+PPN Y +
Sbjct: 670 SSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 151/355 (42%), Gaps = 48/355 (13%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
PD + +++ +G + L +M PDV T+++++ + G+ + V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT--RMELAPDVQS-------- 141
L +I G K + T SL+ Y ++ AE I M R +L ++
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 142 -------------YSIMINGLCKIKMVDD--ALNLFKQMHTENI-------------TPD 173
+G V + +++FK++ ++ PD
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPD 413
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHS---RGLPPNVITYSSLLDALCKNHHVDNAIS 230
Y++L+ G K+GR++D ++ M R P+ +TY++++ A +D A
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQ 473
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI-KGYNLDVRTYTIMINGL 289
++ +M G+ + TY +LL G CK ++ A+++ +++ G DV +Y I+I+G
Sbjct: 474 VLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGC 533
Query: 290 CKDGLFDE---ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
L D+ ALA ++M G P ++Y ++ A G A ++ +M+
Sbjct: 534 I---LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 157/331 (47%), Gaps = 5/331 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ I+D+L K+ + A +Y + + + T+ L+ G C G+++E + +L +M
Sbjct: 230 LYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRM 289
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
PDV+ ++ ++ L EG + + V M + KPDV+ Y +L+ G C V
Sbjct: 290 RENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRV 349
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ ++F M ++ D + Y ++I G V A NL++ + D+ Y+++
Sbjct: 350 ERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAV 409
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GLC ++ A++L L P+ T S ++ A + + + ++++++ G
Sbjct: 410 IKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY 469
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQ--EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
Y T LC K+A +VF L KG+ V Y I++ L K G ++
Sbjct: 470 PVSDYL-TQFFKLLC-ADEEKNAMALDVFYILKTKGHG-SVSVYNILMEALYKMGDIQKS 526
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGD 329
L+L +M G PD+ +Y I I ++GD
Sbjct: 527 LSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 124/276 (44%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 107
G + A L M + P F IL+ + V M K G KP V Y
Sbjct: 172 GHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLY 231
Query: 108 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+ +MD + A ++ L + ++ I++ GLCK +++ L + ++M
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
PDV Y+++I L G + + + +EM + P+V+ Y +L+ LCK+ V+
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
L +MK + IL D Y +L++G G+++ A +++DL+ GY D+ Y +I
Sbjct: 352 GYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIK 411
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
GLC D+A L + PD T I+ A
Sbjct: 412 GLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVA 447
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 125/283 (44%)
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K D ++ L + G + A + +M G P + L+ + +
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
++ M + P V Y+ +++ L K D AL +++ + + + T+ L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
GLCK+GRI + E++ M P+V Y++++ L ++D ++ + +M+ I P
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV Y L+ GLCK GR++ E+F ++ K +D Y ++I G DG A L
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ D+G D Y +I L DKA KL + I L
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 10/275 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ +I LC V+ AY L+ + + + PD T + ++ + ++ +L + +L +
Sbjct: 405 IYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLER- 463
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAV----MIKGGEKPDVVTYSSLMDGYCL 116
I Y S + K E KN +A+ ++K V Y+ LM+
Sbjct: 464 ----IGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYK 519
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
+ ++ K+ +F M ++ PD SYSI I + V A + +++ + P +
Sbjct: 520 MGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAA 579
Query: 177 YSSLIDGLCKSGRISDAWELVNE-MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
Y SL GLC+ G I LV E + + P Y+ + +CK + + + ++ +M
Sbjct: 580 YLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEM 639
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
+G+ + Y ++ G+ K G +K A+EVF +L
Sbjct: 640 NQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%)
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
M ++ P + LI + R + + +M G P V Y+ ++DAL KN +
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
D A+++ + K G++ + T+ IL+ GLCK GR+++ E+ Q + DV YT
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
MI L +G D +L + +M + PD + Y ++ L ++G ++ +L +M +
Sbjct: 304 MIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQ 363
Query: 345 LL 346
+L
Sbjct: 364 IL 365
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 4/250 (1%)
Query: 99 GEKPDVVTYSSLMDGYCLVN--EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 156
G K D Y++ YCL A+ + M P + + I+I +
Sbjct: 153 GYKHDFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 157 DALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 216
++++M P V Y+ ++D L K+G A + + GL T+ L+
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 217 DALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 276
LCK ++ + ++++M+ PDV+ YT ++ L G L + V+ ++
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
DV Y ++ GLCKDG + L +M+ D Y ++I +G A L
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 337 LRQMIARGLL 346
++ G +
Sbjct: 391 WEDLVDSGYI 400
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 125/246 (50%), Gaps = 17/246 (6%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
+ + L+ L +EG VKEA M + KPDV Y+++++ C V KA + + M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 131 T--RMELAPDVQSYSIMINGLCKIKM-----------VDDALNLFKQMHTENITPDVVTY 177
PD +Y+I+I+ C+ M + +A +F++M PDVVTY
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ LIDG CK+ RI A EL +M ++G PN +TY+S + + ++ AI +++ MK
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Query: 238 QGI-LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL-- 294
G +P TYT L+ L + R +A+++ +++ G TY ++ + L +GL
Sbjct: 347 LGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAS 406
Query: 295 -FDEAL 299
DE L
Sbjct: 407 TLDEEL 412
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK--PDVV 105
G +KEA+ +M PDVY ++ +++ALC+ G K+A+ +L M G + PD
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 106 TYSSLMDGYC-----------LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 154
TY+ L+ YC + + +A +F M PDV +Y+ +I+G CK
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 155 VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP-PNVITYS 213
+ AL LF+ M T+ P+ VTY+S I + I A E++ M G P TY+
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYT 358
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
L+ AL + A L+ +M G++P YTY ++ D L G
Sbjct: 359 PLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 14/231 (6%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ ++ L ++ V +A + M PDV Y T+I+ C VG K+A LL+QM +
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 63 KSIN--PDVYTFSILVDALCKEG-----------KVKEAKNVLAVMIKGGEKPDVVTYSS 109
PD YT++IL+ + C+ G ++ EA + M+ G PDVVTY+
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 110 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-E 168
L+DG C N + +A ++F M P+ +Y+ I ++ A+ + + M
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
+ P TY+ LI L ++ R ++A +LV EM GL P TY + DAL
Sbjct: 349 HGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 28/290 (9%)
Query: 72 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE--VNKAEDIFNT 129
F L D L + + + KNV+ + + LM CL E V +A F
Sbjct: 143 FKGLWDFLRQVSRRENGKNVVTT----------ASITCLMK--CLGEEGFVKEALATFYR 190
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT--PDVVTYSSLIDGLCKS 187
M PDV +Y+ +IN LC++ A L QM PD TY+ LI C+
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 188 G-----------RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
G R+ +A + EM RG P+V+TY+ L+D CK + + A+ L + MK
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD-VRTYTIMINGLCKDGLF 295
+G +P+ TY + ++ A E+ + + G+ + TYT +I+ L +
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
EA L+ +M + G P TY+++ AL EG ++ L + + G+
Sbjct: 371 AEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGI 420
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 112 DGYCLV---NEVNKAEDIFNTMTRMELAPDV---QSYSIMINGLCKIKMVDDALNLFKQM 165
D CL+ N+ D ++R E +V S + ++ L + V +AL F +M
Sbjct: 132 DMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRM 191
Query: 166 HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL--PPNVITYSSLLDALCK-- 221
+ PDV Y+++I+ LC+ G A L+++M G PP+ TY+ L+ + C+
Sbjct: 192 KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG 251
Query: 222 ---------NHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
+ A + ++M +G +PDV TY L+DG CK R+ A E+F+D+
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKT 311
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG-CTPDAVTYEIIIYALFQEGDND 331
KG + TY I + A+ +M M+ G P + TY +I+AL +
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
Query: 332 KAEKLLRQMIARGLL 346
+A L+ +M+ GL+
Sbjct: 372 EARDLVVEMVEAGLV 386
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEML--AKRISPDVVTYTTLISGFCIVG----------- 48
Y+TII++LC+ A L +M R PD TYT LIS +C G
Sbjct: 203 YNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRR 262
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
++ EA + +M+ + PDV T++ L+D CK ++ A + M G P+ VTY+
Sbjct: 263 RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRM-ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
S + Y + NE+ A ++ TM ++ P +Y+ +I+ L + + +A +L +M
Sbjct: 323 SFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVE 382
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+ P TY + D L G S L E+H R
Sbjct: 383 AGLVPREYTYKLVCDALSSEGLAST---LDEELHKR 415
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 9/319 (2%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVG---LLNQMVVKSINPDVYTFSI---LVDALCKEGKV 85
P Y L G + Q ++ VG L +MV S + +F+ ++ L K K+
Sbjct: 203 PSDECYVVLFDG---LNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKL 259
Query: 86 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 145
+ A + G K D TY++LM + KA +I+ +M + + D +Y ++
Sbjct: 260 EVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELI 319
Query: 146 INGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
I L K +D A LF+QM + P +SSL+D + K+GR+ + ++ EM G
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P+ + SL+D+ K +D A+ L +MK G P+ YT++++ K G+L+ A
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMT 439
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
VF+D+ G+ TY+ ++ G D A+ + + M + G P +Y ++ L
Sbjct: 440 VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA 499
Query: 326 QEGDNDKAEKLLRQMIARG 344
+ D A K+L +M A G
Sbjct: 500 NKRLVDVAGKILLEMKAMG 518
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 147/328 (44%), Gaps = 17/328 (5%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A+ +Y M D TY +I G+L A L QM + + P FS LVD
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
++ K G++ + V M G +P + SL+D Y +++ A +++ M + P
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
+ Y+++I K ++ A+ +FK M P TYS L++ SG++ A ++
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
N M + GL P + +Y SLL L VD A ++ +MK G DV +L+
Sbjct: 477 NSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI----- 531
Query: 258 GRLKDAQEVFQDLLIKGYNL----DVRTYTIMINGL----CKDGLFDEALALMSKMEDNG 309
+KDA DL +K ++T +I L K+GL+D A L+ + +
Sbjct: 532 -YIKDAS---VDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSA 587
Query: 310 CTPDAVTYEIIIYALFQEGDNDKAEKLL 337
D V Y I+ L + D DK +L+
Sbjct: 588 GKVDLVLYTSILAHLVRCQDEDKERQLM 615
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
++S+++DS+ K ++ + +Y EM P + +LI + G+L A+ L ++M
Sbjct: 350 VFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEM 409
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
P+ +++++++ K GK++ A V M K G P TYS L++ + +V
Sbjct: 410 KKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQV 469
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A I+N+MT L P + SY ++ L ++VD A + +M + DV S +
Sbjct: 470 DSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCA-SDV 528
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ K + A + + M S G+ N L ++ KN D+A L++ + H
Sbjct: 529 LMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAG 588
Query: 241 LPDVYTYTILLDGLCK 256
D+ YT +L L +
Sbjct: 589 KVDLVLYTSILAHLVR 604
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%)
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
D Q+Y+ ++ + A +++ M + D TY +I L KSGR+ A++L
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
+M R L P+ +SSL+D++ K +D ++ + +M+ G P + L+D K
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTY 317
G+L A ++ ++ G+ + YT++I K G + A+ + ME G P TY
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 318 EIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ G D A K+ M GL
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%)
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
+Y+ +I L K + ++ A FK+ D TY++L+ G A+E+ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRL 260
+ TY ++ +L K+ +D A L ++MK + + P ++ L+D + K GRL
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+ +V+ ++ G+ + +I+ K G D AL L +M+ +G P+ Y +I
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 321 IYALFQEGDNDKAEKLLRQMIARGLL 346
I + + G + A + + M G L
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFL 450
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 139/270 (51%), Gaps = 5/270 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+++++ + C++ +A L EM + ISP +VT+ LI G+ +G+ A+ L+ +M
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I DV+T++ ++ L G +A ++ M G P+ VT S + + +N
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ ++ + +M DV + +++ K ++DA +F + + DV T++S+I
Sbjct: 370 QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMI 425
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG-I 240
G C++G A+EL M L PN+IT+++++ KN A+ L ++M+ G +
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
+ T+ +++ G + G+ +A E+F+ +
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 151/303 (49%), Gaps = 9/303 (2%)
Query: 39 TLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 98
++++ + G+L A +M + DV ++ ++ A C+ GK +EA ++ M K
Sbjct: 221 SILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 99 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
G P +VT++ L+ GY + + + A D+ M + DV +++ MI+GL M A
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
L++F++M + P+ VT S + I+ E+ + G +V+ +SL+D
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 219 LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
K +++A + +K++ DVYT+ ++ G C+ G A E+F + +
Sbjct: 397 YSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKMEDNG-CTPDAVTYEIIIYALFQEGDNDKAEKLL 337
+ T+ MI+G K+G EA+ L +ME +G + T+ +II Q G D+A +L
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF 512
Query: 338 RQM 340
R+M
Sbjct: 513 RKM 515
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 140/304 (46%), Gaps = 50/304 (16%)
Query: 13 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTF 72
++++ + L++E PDV T L+S + G + +A + + M + +++T+
Sbjct: 101 RILHARFGLFTE-------PDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTW 149
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
S ++ A +E + +E + +M+K G PD + ++ G +V + I + + +
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK 209
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
+ ++ ++ + ++ K +D A F++M +
Sbjct: 210 LGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD----------------------- 246
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
VI ++S+L A C+N + A+ L+K+M+ +GI P + T+ IL+
Sbjct: 247 ----------------VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
G + G+ A ++ Q + G DV T+T MI+GL +G+ +AL + KM G P
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 313 DAVT 316
+AVT
Sbjct: 351 NAVT 354
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 131/303 (43%), Gaps = 9/303 (2%)
Query: 44 FCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 103
C G L EA L+ + + T+ L+++ G + + +L +PD
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGR-ILHARFGLFTEPD 114
Query: 104 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 163
V + L+ Y + A +F++M L ++S MI + + LF+
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENRWREVAKLFR 170
Query: 164 QMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 223
M + + PD + ++ G G + + + + G+ + +S+L K
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 224 HVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 283
+D A ++M+ + DV + +L C+ G+ ++A E+ +++ +G + + T+
Sbjct: 231 ELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 284 IMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
I+I G + G D A+ LM KME G T D T+ +I L G +A + R+M
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 344 GLL 346
G++
Sbjct: 347 GVV 349
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 157/357 (43%), Gaps = 22/357 (6%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++++I C+ AY L++ M + P+++T+ T+ISG+ G EA+ L +M
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRME 480
Query: 62 VKS-INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ + T+++++ + GK EA + M P+ VT SL+ +
Sbjct: 481 KDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGA 540
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+I + R L + + + K ++ + +F M T+ D++T++SL
Sbjct: 541 KMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSL 596
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-G 239
I G G A L N+M ++G+ PN T SS++ A +VD + + +
Sbjct: 597 IGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYH 656
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
I+P + + ++ + RL++A + Q++ I+ + + + G G D A+
Sbjct: 657 IIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS---ETPIWESFLTGCRIHGDIDMAI 713
Query: 300 A----LMSKMEDNGCTPDAVTYEIIIYALFQ------EGDNDKAEKLLRQMIARGLL 346
L S +N T V+ IYAL EG+ + + LL++ + + +
Sbjct: 714 HAAENLFSLEPENTATESIVSQ---IYALGAKLGRSLEGNKPRRDNLLKKPLGQSWI 767
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 85 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR-MELAPDVQSYS 143
V EAK ++ G KP+ T++S+M + E E I+ M + +P+V SY+
Sbjct: 231 VDEAKKMI-----GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYN 285
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+++ C ++ +A ++++M + D+V Y+++I GLC + + A EL +M +
Sbjct: 286 VLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLK 345
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC---KGGRL 260
G+ +TY L++ CK VD+ + + ++MK +G D T L++GLC G R+
Sbjct: 346 GIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRV 405
Query: 261 KDAQEVFQDLLIKGYNLDVRT-YTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEI 319
+A ++ +D + + R Y +++ LC+DG D AL + ++M G P TY
Sbjct: 406 VEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRA 465
Query: 320 IIYALFQEGDNDKAEKLLRQM 340
I GD + + L +M
Sbjct: 466 FIDGYGIVGDEETSALLAIEM 486
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 135/269 (50%), Gaps = 18/269 (6%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLA-------------KRISPDVVTYTTLISGFCIVGQ 49
+ +I + + + ++ Y +Y E+ +I P+ T+ +++ F G+
Sbjct: 201 NALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGE 260
Query: 50 LKEAVGLLNQMVVK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
+ + +M + +P+VY++++L++A C G + EA+ V M G D+V Y+
Sbjct: 261 TEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYN 320
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
+++ G C EV KA+++F M + +Y ++NG CK VD L ++++M +
Sbjct: 321 TMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRK 380
Query: 169 NITPDVVTYSSLIDGLC--KSG-RISDAWELVNEMHSRGL-PPNVITYSSLLDALCKNHH 224
D +T +L++GLC + G R+ +A ++V + + P+ Y L+ LC++
Sbjct: 381 GFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGK 440
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDG 253
+D A+++ +M +G P TY +DG
Sbjct: 441 MDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 124/242 (51%), Gaps = 8/242 (3%)
Query: 112 DGYCLVNEVNKAEDI-FNTMTRM--ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
+GY + EV +D+ + +M ++ P+ +++ M+ + + ++++M E
Sbjct: 215 NGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEE 274
Query: 169 -NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
+P+V +Y+ L++ C G +S+A ++ EM RG+ +++ Y++++ LC N V
Sbjct: 275 VGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVK 334
Query: 228 AISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
A L + M +GI TY L++G CK G + V++++ KG+ D T ++
Sbjct: 335 AKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVE 394
Query: 288 GLC--KDG--LFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
GLC +DG + + A + + + P YE+++ L ++G D+A + +M+ +
Sbjct: 395 GLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK 454
Query: 344 GL 345
G
Sbjct: 455 GF 456
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ ++++ C L+++A ++ EM + + D+V Y T+I G C ++ +A L M
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMG 343
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC---LVN 118
+K I T+ LV+ CK G V V M + G + D +T +L++G C
Sbjct: 344 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQ 403
Query: 119 EVNKAEDIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
V +A DI R + P Y +++ LC+ +D ALN+ +M + P TY
Sbjct: 404 RVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Query: 178 SSLIDG 183
+ IDG
Sbjct: 464 RAFIDG 469
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 110/234 (47%), Gaps = 16/234 (6%)
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+ + R AP V + ++I K +D A+ + +++ + I + T ++LI +
Sbjct: 151 LIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVS 208
Query: 186 KSGRISDAWELVNEMHS-------------RGLPPNVITYSSLLDALCKNHHVDNAISLI 232
+ S+ +++ E+ + PN T++S++ + + + +
Sbjct: 209 RRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIW 268
Query: 233 KKMKHQ-GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
++M+ + G P+VY+Y +L++ C G + +A++V++++ ++G D+ Y MI GLC
Sbjct: 269 REMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCS 328
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +A L M G +TYE ++ + GD D + R+M +G
Sbjct: 329 NFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGF 382
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC--IVGQ-LKEAVGLLN 58
Y +++ CK V+ +Y EM K D +T L+ G C GQ + EA ++
Sbjct: 354 YEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVK 413
Query: 59 QMVVKSI-NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
V +++ P + +LV LC++GK+ A N+ A M+ G KP TY + +DGY +V
Sbjct: 414 DAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIV 473
Query: 118 NE 119
+
Sbjct: 474 GD 475
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 24 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEG 83
E+ K+ D + L+ FC ++KEA + ++ + NPDV T +IL+ + G
Sbjct: 168 EIFRKKFGVD--EFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAG 224
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
V + M+K G KP+ VTY +DG+C +A +F M R++ VQ +
Sbjct: 225 DVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILT 284
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
+I+G + A LF ++ +TPD Y++L+ L K G +S A +++ EM +
Sbjct: 285 TLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
Query: 204 GLPPNVITYSSLLDALCKNHH--VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
G+ P+ +T+ S+ + K+ + +KMK + ++P T +L+ C G +
Sbjct: 345 GIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVN 404
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG-CTPDAV 315
++++ +L KGY ++ LC ++A + + G C + V
Sbjct: 405 LGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPV 459
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 108/274 (39%), Gaps = 37/274 (13%)
Query: 21 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALC 80
Y EM+ + P+ VTY I GFC EA+ L M D F I V L
Sbjct: 232 FYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDM-------DRLDFDITVQIL- 283
Query: 81 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 140
++L+ G + KA +F+ +++ L PD
Sbjct: 284 ---------------------------TTLIHGSGVARNKIKARQLFDEISKRGLTPDCG 316
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR--ISDAWELVN 198
+Y+ +++ L K V A+ + K+M + I PD VT+ S+ G+ KS + E
Sbjct: 317 AYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQ 376
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
+M R L P T L+ C N V+ + L K M +G P + +L LC
Sbjct: 377 KMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARR 436
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
R DA E + +G + Y ++ L +
Sbjct: 437 RANDAFECSWQTVERGRCVSEPVYRMLETSLSSN 470
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 2/223 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y ID CK + +A L+ +M V TTLI G + +A L +++
Sbjct: 248 YGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEIS 307
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE-- 119
+ + PD ++ L+ +L K G V A V+ M + G +PD VT+ S+ G E
Sbjct: 308 KRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFG 367
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
N + + M L P + +++ C V+ L+L+K M + P
Sbjct: 368 FNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALEL 427
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 222
L LC R +DA+E + RG + Y L +L N
Sbjct: 428 LTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSN 470
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 169/360 (46%), Gaps = 51/360 (14%)
Query: 17 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV-KSINPDVYTFSIL 75
DA ++ EM PDV+ +T ++S F +EA+GL M K + PD TF +
Sbjct: 216 DARRVFDEM----PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
+ A ++K+ K + +I G +VV SSL+D Y V +A +FN M++
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK--- 328
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI------------------------- 170
+ S+S ++ G C+ + A+ +F++M +++
Sbjct: 329 -KNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQ 387
Query: 171 ------TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
+V+ S+LID KSG I A + ++M R N+IT++++L AL +N
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGR 443
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT--Y 282
+ A+S M +GI PD ++ +L G + + + F L+ K Y + T Y
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFV-LMAKSYGIKPGTEHY 502
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDK-AEKLLRQMI 341
+ MI+ L + GLF+EA L+ + E C DA + +++ D + AE++ ++M+
Sbjct: 503 SCMIDLLGRAGLFEEAENLLERAE---CRNDASLWGVLLGPCAANADASRVAERIAKRMM 559
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 155/353 (43%), Gaps = 52/353 (14%)
Query: 29 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEA 88
R D +++T+++SG+ + +A+ + +MV ++ + +T S V A + G+V+
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 148
+ V+I G + + S+L Y + E A +F+ M PDV ++ +++
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSA 238
Query: 149 LCKIKMVDDALNLFKQMH------------------------------------TENITP 172
K + ++AL LF MH T I
Sbjct: 239 FSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGS 298
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
+VV SSL+D K G + +A ++ N M + N +++S+LL C+N + AI +
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIF 354
Query: 233 KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
++M+ + D+Y + +L ++ +E+ + +G +V + +I+ K
Sbjct: 355 REMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKS 410
Query: 293 GLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G D A + SKM + +T+ ++ AL Q G ++A M+ +G+
Sbjct: 411 GCIDSASRVYSKMS----IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S +ID K ++ A +YS+M + +++T+ ++S G+ +EAV N MV
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVN 121
K I PD +F ++ A G V E +N +M K G KP YS ++D L+
Sbjct: 457 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMID---LLGRAG 513
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE--NITPDVVTYSS 179
E+ N + R E D + +++ G C DA + +++ + P
Sbjct: 514 LFEEAENLLERAECRNDASLWGVLL-GPCAANA--DASRVAERIAKRMMELEPKYHMSYV 570
Query: 180 LIDGLCKS-GRISDAWELVNEMHSRGLPPNV 209
L+ + K+ GR DA + M RG+ V
Sbjct: 571 LLSNMYKAIGRHGDALNIRKLMVRRGVAKTV 601
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 148/314 (47%), Gaps = 1/314 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ + K K + + L+ EML + I PD T+TT+IS G K AV +M
Sbjct: 177 LYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM 236
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
PD T + ++DA + G V A ++ + D VT+S+L+ Y +
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ +I+ M + + P++ Y+ +I+ + + K A ++K + T TP+ TY++L
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH-QG 239
+ ++ DA + EM +GL VI Y++LL N +VD A + + MK+ +
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCET 416
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
PD +T++ L+ GR+ +A+ + G+ + T +I K D+ +
Sbjct: 417 CDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVV 476
Query: 300 ALMSKMEDNGCTPD 313
++ + G TPD
Sbjct: 477 RTFDQVLELGITPD 490
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 141/286 (49%), Gaps = 3/286 (1%)
Query: 29 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEA 88
+ S +V+ Y + F L+++ L ++M+ + I PD TF+ ++ + G K A
Sbjct: 170 KPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRA 229
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 148
M G +PD VT ++++D Y V+ A +++ + D ++S +I
Sbjct: 230 VEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRI 289
Query: 149 LCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 208
D LN++++M + P++V Y+ LID + ++ R A + ++ + G PN
Sbjct: 290 YGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPN 349
Query: 209 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKD-AQEVF 267
TY++L+ A + + D+A+++ ++MK +G+ V Y LL +C R D A E+F
Sbjct: 350 WSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIF 408
Query: 268 QDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
QD+ + + D T++ +I G EA A + +M + G P
Sbjct: 409 QDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 21/332 (6%)
Query: 32 PDVVTYTTLISGFCIVGQL--KEAVGLLNQMVVKSINP--------------DVYTFSIL 75
P+ +I+GF G+L ++AV LN M P +V +++
Sbjct: 124 PNEADVCDVITGFG--GKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVT 181
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
+ K +++++ + M++ G KPD T+++++ +A + F M+
Sbjct: 182 MKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGC 241
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
PD + + MI+ + VD AL+L+ + TE D VT+S+LI SG
Sbjct: 242 EPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLN 301
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
+ EM + G+ PN++ Y+ L+D++ + A + K + G P+ TY L+
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF-DEALALMSKMED-NGCTPD 313
+ DA +++++ KG +L V Y +++ +C D + DEA + M++ C PD
Sbjct: 362 RARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIFQDMKNCETCDPD 420
Query: 314 AVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ T+ +I G +AE L QM G
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGF 452
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 21 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALC 80
++ M + D Y +I G C G+ EA + +++ + PDV T+++++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 81 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 140
+ + A+ + A MI+ G PD +TY+S++ G C N++ +A + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCS 107
Query: 141 SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEM 200
+++ +ING CK V D +NLF +M+ I +V+TY++LI G + G + A ++ EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 201 HSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
S G+ + IT+ +L LC + A++++
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
D ++I++ LCK GK EA N+ ++ G +PDV TY+ ++ + + +AE ++
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLY 68
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
M R L PD +Y+ MI+GLCK + A ++ T+++LI+G CK+
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKA 119
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
R+ D L EM+ RG+ NVITY++L+ + + A+ + ++M G+ T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 248 TILLDGLCKGGRLKDA 263
+L LC L+ A
Sbjct: 180 RDILPQLCSRKELRKA 195
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+F M + D Y+I+I+GLCK D+A N+F + + PDV TY+ +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
+ + A +L EM RGL P+ ITY+S++ LCK + + A + K
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCS 107
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
T+ L++G CK R+KD +F ++ +G +V TYT +I+G + G F+ AL + +M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
NG ++T+ I+ L + KA +L Q
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 161 LFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 220
+FK M N+ D Y+ +I GLCK+G+ +A + + GL P+V TY+ ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 221 KNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 280
+ + A L +M +G++PD TY ++ GLCK +L A++V +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS---------CS 107
Query: 281 TYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
T+ +ING CK + + L +M G + +TY +I+ Q GD + A + ++M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 341 IARGL 345
++ G+
Sbjct: 168 VSNGV 172
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ II LCK ++A N+++ +L + PDV TY +I L A L +M+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLYAEMI 72
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + PD T++ ++ LCK+ K+ +A+ V T+++L++GYC V
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVK 123
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
++F M R + +V +Y+ +I+G ++ + AL++F++M + + +T+ ++
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 182 DGLCKSGRISDAWELV 197
LC + A ++
Sbjct: 184 PQLCSRKELRKAVAML 199
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A LY+EM+ + + PD +TY ++I G C +L +A + ++ TF+ L++
Sbjct: 64 AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLIN 114
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
CK +VK+ N+ M + G +V+TY++L+ G+ V + N A DIF M +
Sbjct: 115 GYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS 174
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQ---MHTENIT 171
++ ++ LC K + A+ + Q M + N+T
Sbjct: 175 SSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNVT 211
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEK 335
++D Y I+I+GLCK G FDEA + + + +G PD TY ++I + +AEK
Sbjct: 11 DMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEK 66
Query: 336 LLRQMIARGLL 346
L +MI RGL+
Sbjct: 67 LYAEMIRRGLV 77
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 83/141 (58%)
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
M R + P +Y+ MI+G CK VDDA + M ++ +PDVVT+S+LI+G CK+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 190 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTI 249
+ + E+ EMH RG+ N +TY++L+ C+ +D A L+ +M G+ PD T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 250 LLDGLCKGGRLKDAQEVFQDL 270
+L GLC L+ A + +DL
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 88/142 (61%)
Query: 95 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 154
M++ P +TY+S++DG+C + V+ A+ + ++M +PDV ++S +ING CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 155 VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 214
VD+ + +F +MH I + VTY++LI G C+ G + A +L+NEM S G+ P+ IT+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 215 LLDALCKNHHVDNAISLIKKMK 236
+L LC + A ++++ ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
+I P +TY+S+IDG CK R+ DA +++ M S+G P+V+T+S+L++ CK VDN
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
+ + +M +GI+ + TYT L+ G C+ G L AQ++ +++ G D T+ M+ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 289 LCKDGLFDEALALMSKME 306
LC +A A++ ++
Sbjct: 125 LCSKKELRKAFAILEDLQ 142
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 82/142 (57%)
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
M+ SI P T++ ++D CK+ +V +AK +L M G PDVVT+S+L++GYC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
V+ +IF M R + + +Y+ +I+G C++ +D A +L +M + + PD +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 180 LIDGLCKSGRISDAWELVNEMH 201
++ GLC + A+ ++ ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 78/142 (54%)
Query: 25 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGK 84
ML I P +TY ++I GFC ++ +A +L+ M K +PDV TFS L++ CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 85 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 144
V + M + G + VTY++L+ G+C V +++ A+D+ N M +APD ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 145 MINGLCKIKMVDDALNLFKQMH 166
M+ GLC K + A + + +
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%)
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P ITY+S++D CK VD+A ++ M +G PDV T++ L++G CK R+ + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
F ++ +G + TYT +I+G C+ G D A L+++M G PD +T+ ++ L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 327 EGDNDKAEKLLRQM 340
+ + KA +L +
Sbjct: 128 KKELRKAFAILEDL 141
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+++ID CK V+DA + M +K SPDVVT++TLI+G+C ++ + + +M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ I + T++ L+ C+ G + A+++L MI G PD +T+ ++ G C E+
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 122 KAEDIFNTMTRME 134
KA I + + E
Sbjct: 133 KAFAILEDLQKSE 145
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 294
M I P TY ++DG CK R+ DA+ + + KG + DV T++ +ING CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 295 FDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
D + + +M G + VTY +I+ Q GD D A+ LL +MI+ G+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 164/346 (47%), Gaps = 11/346 (3%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+T+I + + +A LY + +P ++I + G L++A GL +
Sbjct: 674 ATLIAVYGRQHKLKEAKRLYLAA-GESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAE 732
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
K +P T SILV+AL GK +EA+++ ++ + D V Y++L+ ++
Sbjct: 733 KGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQC 792
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A +I+ M + +Q+Y+ MI+ + +D A+ +F + D Y+++I
Sbjct: 793 ASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIM 852
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD--ALCKNHH-VDNAISLIKKMKHQG 239
K G++S+A L +EM +G+ P +Y+ ++ A + HH VD L++ M+ G
Sbjct: 853 HYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDE---LLQAMERNG 909
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
D+ TY L+ + + +A++ + KG L ++ +++ L K G+ +EA
Sbjct: 910 RCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAE 969
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKA----EKLLRQMI 341
KM + G +PD+ I+ GD +K EK++R +
Sbjct: 970 RTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSV 1015
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 141/308 (45%), Gaps = 5/308 (1%)
Query: 40 LISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 99
+IS F G + +A + + ++ + + T + L+ ++ K+KEAK + + G
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---LAAG 697
Query: 100 EK--PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 157
E P S++D Y + A +F P + SI++N L +
Sbjct: 698 ESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 158 ALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
A ++ + +NI D V Y++LI + ++G++ A E+ MH+ G+P ++ TY++++
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 218 ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 277
+ +D AI + + G+ D YT ++ KGG++ +A +F ++ KG
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 278 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
+Y +M+ L E L+ ME NG D TY +I + +AEK +
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 338 RQMIARGL 345
+ +G+
Sbjct: 938 TLVKEKGI 945
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 149/337 (44%), Gaps = 1/337 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ ++ SL K +L+ EM+ + + P+ TYT ++S + G +EA+ +M
Sbjct: 260 VYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEM 319
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
P+ T+S ++ K G ++A + M G P T ++++ Y
Sbjct: 320 KSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENY 379
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
KA +F M R ++ D ++I K+ + DA ++F++ N+ D TY ++
Sbjct: 380 PKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAM 439
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
SG + A +++ M +R +P + Y +L K +VD A + + G
Sbjct: 440 SQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG- 498
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
LPD + +L+ + + A+ + +++ + D+ Y + CK+G+ EA
Sbjct: 499 LPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQD 558
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
L+ KM D + + ++ +DK E +L
Sbjct: 559 LIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVL 595
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 4/282 (1%)
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
S P V ++I++ + GK+K A+ M++ G +PD V +++ Y +
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
+ + + Y+ M++ L K ++L+ +M E + P+ TY+ ++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
K G +A + EM S G P +TYSS++ K + AI L + M+ QGI+P
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS 362
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD--VRTYTIMINGLCKDGLFDEALAL 301
YT +L K A +F D+ D +R I I G K GLF +A ++
Sbjct: 363 NYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYG--KLGLFHDAQSM 420
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+ E D TY + G+ KA ++ M R
Sbjct: 421 FEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTR 462
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 144/325 (44%), Gaps = 40/325 (12%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
++ID+ + + DAY L+ E K P VT + L++ G+ +EA + + K
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
+I D ++ L+ A+ + GK++ A + M G + TY++++ Y +++KA
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP----------- 172
+IF+ R L D + Y+ MI K + +AL+LF +M + I P
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Query: 173 ------------------------DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 208
D+ TY +LI +S + ++A + + + +G+P +
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 209 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE--V 266
+SSLL AL K ++ A KM GI PD +L G G DA++ +
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCG---DAEKGIL 1005
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCK 291
F + +I+ D R + ++ L K
Sbjct: 1006 FYEKMIRSSVEDDRFVSSVVEDLYK 1030
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 1/221 (0%)
Query: 121 NKAEDIFNTMT-RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ D F+ M ++ P V Y+I++ ++ + A F +M PD V +
Sbjct: 169 RQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGT 228
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
++ + GR S + R + + Y+ +L +L K I L +M +G
Sbjct: 229 MLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEG 288
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ P+ +TYT+++ K G ++A + F ++ G+ + TY+ +I+ K G +++A+
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L M G P T ++ ++ + KA L M
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%)
Query: 172 PDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
P VV Y+ ++ + G+I A E EM G P+ + ++L + ++
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
K ++ + IL Y +L L K +++ +++ +G + TYT++++ K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G +EAL +M+ G P+ VTY +I + GD +KA L M ++G++
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/324 (18%), Positives = 131/324 (40%), Gaps = 1/324 (0%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A + EML PD V T++ + G+ + + + I ++ ++
Sbjct: 207 AEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLS 266
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
+L K+ + ++ M++ G P+ TY+ ++ Y +A F M + P
Sbjct: 267 SLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVP 326
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
+ +YS +I+ K + A+ L++ M ++ I P T ++++ K+ A L
Sbjct: 327 EEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLF 386
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
+M +P + + ++ K +A S+ ++ + +L D TY +
Sbjct: 387 ADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNS 446
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTY 317
G + A +V + + + L Y +M+ K D A + G PDA +
Sbjct: 447 GNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSC 505
Query: 318 EIIIYALFQEGDNDKAEKLLRQMI 341
++ + +KA+ ++Q++
Sbjct: 506 NDMLNLYTRLNLGEKAKGFIKQIM 529
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+T+I + ++ A ++S + D YT +I + G++ EA+ L ++M
Sbjct: 812 YNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQ 871
Query: 62 VKSINPDVYTFSILVDALCKEGKV-KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K I P +++++V +C ++ E +L M + G D+ TY +L+ Y ++
Sbjct: 872 KKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQF 930
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+AE + + +S +++ L K M+++A + +M I+PD ++
Sbjct: 931 AEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTI 990
Query: 181 IDGLCKSG 188
+ G G
Sbjct: 991 LKGYMTCG 998
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 118/231 (51%)
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
L +N+A +I M P +S++ ++N L K+ D+ +F + D
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
+ LI GLC+SG + A +L++E + PNV+T+S L+ C + A L+++M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
+ + I PD T+ IL+ GL K GR+++ ++ + + +KG + TY ++ GL
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
EA +MS+M G P ++Y+ ++ L + + + +LRQM+ G +
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 126/256 (49%)
Query: 83 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 142
G++ A +L M G P +++ +++ ++ IF + ++ + D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 143 SIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHS 202
+I+I GLC+ ++ AL L + + P+V+T+S LI G C G+ +A++L+ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 203 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKD 262
+ P+ IT++ L+ L K V+ I L+++MK +G P+ TY +L GL R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 263 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIY 322
A+E+ ++ G +Y M+ GLC+ E ++ +M ++G P + + ++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 323 ALFQEGDNDKAEKLLR 338
+ + ++D L R
Sbjct: 386 CVVSKNNDDSQANLDR 401
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 98/180 (54%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
D +IL+ LC+ G ++ A +L + +P+V+T+S L+ G+C + +A +
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
M + + PD +++I+I+GL K V++ ++L ++M + P+ TY ++ GL
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
R +A E++++M S G+ P+ ++Y ++ LC+ V ++++M + G +P +
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%)
Query: 46 IVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 105
+ G++ A+ +L M P +F+ +++ L E + K G + D
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 106 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 165
+ L+ G C + A + + + + P+V ++S +I G C ++A L ++M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 166 HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
E I PD +T++ LI GL K GR+ + +L+ M +G PN TY +L L
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
A ++ +M G+ P +Y ++ GLC+ + + V + ++ G+
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 109/202 (53%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I C+ + +Y++ +EM K I P+ ++ +ISGF + E +L M
Sbjct: 190 YNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMK 249
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ +N V T++I + +LCK K KEAK +L M+ G KP+ VTYS L+ G+C ++
Sbjct: 250 DRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFE 309
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A+ +F M PD + Y +I LCK + AL+L K+ +N P SL+
Sbjct: 310 EAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLV 369
Query: 182 DGLCKSGRISDAWELVNEMHSR 203
+GL K ++ +A EL+ ++ +
Sbjct: 370 NGLAKDSKVEEAKELIGQVKEK 391
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 12/313 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ---LKEAVGLLN 58
+S +++L + K + NL + R PD+ + + Q L ++ +
Sbjct: 83 FSAAVENLAEKKHFSAVSNLLDGFIENR--PDLKSERFAAHAIVLYAQANMLDHSLRVFR 140
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLV 117
+ I+ V + + L+ A KEAK V M K G +PD+ TY+ ++ +C
Sbjct: 141 DLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCES 200
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
+ + I M R + P+ S+ +MI+G D+ + M + V TY
Sbjct: 201 GSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTY 260
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ I LCK + +A L++ M S G+ PN +TYS L+ C + A L K M +
Sbjct: 261 NIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVN 320
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM---INGLCKDGL 294
+G PD Y L+ LCKGG + A + ++ + K + V +++IM +NGL KD
Sbjct: 321 RGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNW---VPSFSIMKSLVNGLAKDSK 377
Query: 295 FDEALALMSKMED 307
+EA L+ ++++
Sbjct: 378 VEEAKELIGQVKE 390
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 64 SINPDVY----TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG---YCL 116
S+ PD FS V+ L ++ N+L I+ +PD+ + Y
Sbjct: 71 SLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIEN--RPDLKSERFAAHAIVLYAQ 128
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPDVV 175
N ++ + +F + + E++ V+S + ++ K +A ++ +M I PD+
Sbjct: 129 ANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLE 188
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 235
TY+ +I C+SG S ++ +V EM +G+ PN ++ ++ D ++ M
Sbjct: 189 TYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMM 248
Query: 236 KHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 295
K +G+ V TY I + LCK + K+A+ + +L G + TY+ +I+G C + F
Sbjct: 249 KDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDF 308
Query: 296 DEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
+EA L M + GC PD+ Y +IY L + GD + A L ++ + + +
Sbjct: 309 EEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
I PD+ TY +I FC G + ++ +M K I P+ +F +++ E K E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
VLA+M G V TY+ + C + +A+ + + M + P+ +YS +I+G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
C ++A LFK M PD Y +LI LCK G A L E + P+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
SL++ L K+ V+ A LI ++K +
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 115 CLV-NEVNKAEDIFNTMTRM-ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 172
CLV + +A+ ++ M +M + PD+++Y+ MI C+ + ++ +M + I P
Sbjct: 161 CLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKP 220
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
+ ++ +I G + + +++ M RG+ V TY+ + +LCK A +L+
Sbjct: 221 NSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALL 280
Query: 233 KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
M G+ P+ TY+ L+ G C ++A+++F+ ++ +G D Y +I LCK
Sbjct: 281 DGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKG 340
Query: 293 GLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
G F+ AL+L + + P + ++ L ++ ++A++L+ Q+
Sbjct: 341 GDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 37/379 (9%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y++++ L K+ ++ Y++ +EM+ + +SP+ T + FC G + EA+ L
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
P +++ L+ LC V++A +VL I G T+S+L + C + +
Sbjct: 420 EIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPD 479
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A ++ +L P + +I+ LC + V+DAL + + + + ++SLI
Sbjct: 480 MARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLI 539
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC------KN------------- 222
G R A +L+ M +G P Y +++ +C KN
Sbjct: 540 YGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLW 599
Query: 223 HHVDNAISLIKK-----------------MKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
H A +L + M GI P V + ++L K ++ DA
Sbjct: 600 EHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALH 659
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
F DL +G R Y +MI GLCK D+A+ + +M+ G P YE+ I L
Sbjct: 660 FFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLC 718
Query: 326 QEGDNDKAEKLLRQMIARG 344
E D+A L+ + G
Sbjct: 719 NEEKYDEAVGLVNEFRKSG 737
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 37/324 (11%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y ++++L ++K D++++ + ++ R VT++ L+ FC G+L EA L ++
Sbjct: 220 YHVLLNALVEEKCF-DSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALL 278
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
ILVDALC + K +EA + L+D LV VN
Sbjct: 279 PNDPAGCGSGLGILVDALCSKRKFQEA-------------------TKLLDEIKLVGTVN 319
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-ENITPDVVTYSSL 180
M R +Y+I I L K +++ + +++ E +V Y+S+
Sbjct: 320 --------MDR--------AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSM 363
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ L K + ++++ EM RG+ PN T ++ L CK VD A+ L + G
Sbjct: 364 VFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGF 423
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P +Y L+ LC ++ A +V + + +G+ L +T++ + N LC G D A
Sbjct: 424 APTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARE 483
Query: 301 LMSKMEDNGCTPDAVTYEIIIYAL 324
L+ + P + II AL
Sbjct: 484 LVIAAAERDLLPKRIAGCKIISAL 507
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 141/309 (45%), Gaps = 2/309 (0%)
Query: 39 TLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 98
L+ G+ + G+ A+ M + ++ D + + +L++AL +E K ++ +V+ I
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEE-KCFDSFDVIFDQISV 245
Query: 99 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
VT+S L+ +C ++++AED + + A I+++ LC + +A
Sbjct: 246 RGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEA 305
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLD 217
L ++ Y+ I L K+G +++ + + ++ G V Y+S++
Sbjct: 306 TKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVF 365
Query: 218 ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 277
L K +++D ++ +M +G+ P+ T L CK G + +A E+++ G+
Sbjct: 366 QLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAP 425
Query: 278 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
+Y +I+ LC + ++A ++ D G T+ + AL +G D A +L+
Sbjct: 426 TAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
Query: 338 RQMIARGLL 346
R LL
Sbjct: 486 IAAAERDLL 494
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 141/310 (45%), Gaps = 8/310 (2%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ST+ ++LC + A L + + P + +IS C VG++++A+ ++N++
Sbjct: 465 FSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL-MINELF 523
Query: 62 VKS-INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
KS ++ F+ L+ + A ++ M + G P Y +++ C +
Sbjct: 524 NKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESG 583
Query: 121 NKAEDIFNTMTRMELA---PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
K + F T+ + +L+ VQ+Y++ I G A ++ M + ITP V +
Sbjct: 584 EK--NFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASN 641
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
++ K+ +I+DA +++ +G + Y ++ LCK + +D+A+ +++MK
Sbjct: 642 ILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKG 700
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
+G+ P + Y + + LC + +A + + G + ++++ K E
Sbjct: 701 EGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYE 760
Query: 298 ALALMSKMED 307
A M +ED
Sbjct: 761 AWTRMRNIED 770
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 138/326 (42%), Gaps = 20/326 (6%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISP------DVVTYTTLISGFCIVGQLKEAVG 55
Y+ I +L K +N+ + ++ISP +V Y +++ L
Sbjct: 324 YNIWIRALIKAGFLNNPADFL-----QKISPLEGCELEVFRYNSMVFQLLKENNLDGVYD 378
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
+L +M+V+ ++P+ T + + CK G V EA + + G P ++Y+ L+ C
Sbjct: 379 ILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLC 438
Query: 116 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVV 175
V +A D+ +++S + N LC D A L ++ P +
Sbjct: 439 ANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRI 498
Query: 176 TYSSLIDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
+I LC G++ DA ++NE+ ++ G+ + ++SL+ D A LI +
Sbjct: 499 AGCKIISALCDVGKVEDAL-MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIR 557
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG----YNLDVRTYTIMINGLC 290
M+ +G P Y ++ +C+ ++ ++ F L+K + V+ Y + I G
Sbjct: 558 MQEKGYTPTRSLYRNVIQCVCE---MESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAG 614
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVT 316
G A + M+ +G TP +
Sbjct: 615 FAGKPKLARLVYDMMDRDGITPTVAS 640
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 122/288 (42%), Gaps = 9/288 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS---PDVVTYTTLISGFCIVGQLKEAVGLL 57
+Y +I +C+ + + N ++ +L ++S V Y I G G+ K A +
Sbjct: 569 LYRNVIQCVCE--MESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVY 626
Query: 58 NQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 117
+ M I P V + +++ + K K+ +A + + + G K Y ++ G C
Sbjct: 627 DMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKA 685
Query: 118 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY 177
N+++ A M L P ++ Y + I LC + D+A+ L +
Sbjct: 686 NKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIG 745
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ L+ KS + +AW + + + P + + L+ ++ + + ++
Sbjct: 746 NVLLHNAMKSKGVYEAWTRMRNIEDK--IPEMKSLGELIGLFSGRIDMEVELKRLDEVIE 803
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
+ D+YTY +LL + + +DA E+ + + +GY + RT I+
Sbjct: 804 KCYPLDMYTYNMLLRMIVM-NQAEDAYEMVERIARRGYVPNERTDMIL 850
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 147/332 (44%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ + SL K +A + EM K I Y+ LI F ++ L +
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 309
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K + D +V +EG ++ V+A M K K ++++G+
Sbjct: 310 GGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGF 369
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A ++ + E +Y+I IN C+++ + A LF +M + VV YS++
Sbjct: 370 AEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNI 429
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+D K+ R+SDA L+ +M RG PN+ Y+SL+D + + A + K+MK +
Sbjct: 430 MDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKV 489
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
LPD +YT ++ + L+ E++Q+ + +D IM+ K DE +
Sbjct: 490 LPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMR 549
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
L+ M+ G DA Y + AL G N +
Sbjct: 550 LLQDMKVEGTRLDARLYSSALNALRDAGLNSQ 581
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 146/332 (43%), Gaps = 12/332 (3%)
Query: 21 LYSEMLAKRIS----PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILV 76
L+ E ++R+S YT + S G+ EA+ +L +M K I +S+L+
Sbjct: 231 LFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLI 290
Query: 77 DALCKEGKVKEAKNVLAVMIKGGEK----PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
A + +V + + GG+K P++ LM Y + ++ M +
Sbjct: 291 RAFAEAREVVITEKLFKEA--GGKKLLKDPEMCLKVVLM--YVREGNMETTLEVVAAMRK 346
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
EL ++NG K + +A+ +++ E VTY+ I+ C+ + +
Sbjct: 347 AELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNK 406
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
A L +EM +G V+ YS+++D K + +A+ L+ KMK +G P+++ Y L+D
Sbjct: 407 AEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLID 466
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
+ L+ A+++++++ D +YT MI+ + + + L + N
Sbjct: 467 MHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKI 526
Query: 313 DAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
D I++ + D+ +LL+ M G
Sbjct: 527 DRAMAGIMVGVFSKTSRIDELMRLLQDMKVEG 558
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 168/377 (44%), Gaps = 53/377 (14%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I+ K A +Y M ++ + PD VT L+S ++G L +
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + + L+D K G + EA+ + + EK +V++++++ GY ++
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL----EKRTIVSWTTMISGYARCGLLD 340
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT----- 176
+ +F+ M DV ++ MI G + K DAL LF++M T N PD +T
Sbjct: 341 VSRKLFDDMEE----KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 177 ---------------------YS---------SLIDGLCKSGRISDAWELVNEMHSRGLP 206
YS SL+D K G IS+A + + + +R
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR--- 453
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
N +TY++++ L + AIS +M GI PD T+ LL C GG ++ ++
Sbjct: 454 -NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 512
Query: 267 FQDLLIKGYNLD--VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
F + + +NL+ ++ Y+IM++ L + GL +EA LM M DA + +++
Sbjct: 513 FSQMKSR-FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP---MEADAAVWGALLFGC 568
Query: 325 FQEGDNDKAEKLLRQMI 341
G+ + EK ++++
Sbjct: 569 RMHGNVELGEKAAKKLL 585
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 146/311 (46%), Gaps = 12/311 (3%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D+V++ LI+G+ +G+ ++A+ + M + + PD T LV + G + K
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
+ + G + + ++LMD + ++++A IF+ + + + S++ MI+G +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV----SWTTMISGYARC 336
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
++D + LF M + DVV ++++I G ++ R DA L EM + P+ IT
Sbjct: 337 GLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
L A + +D I + + ++ + +V T L+D K G + +A VF +
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDK 332
+ + TYT +I GL G A++ ++M D G PD +T+ ++ A G
Sbjct: 453 R----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 333 AEKLLRQMIAR 343
QM +R
Sbjct: 509 GRDYFSQMKSR 519
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 144/323 (44%), Gaps = 24/323 (7%)
Query: 5 IIDSLCKDKLV------NDAYNLYSEMLAKRI-SPDVVTYTTLISGFCIVGQLKEAVGLL 57
I+D +L+ Y YS + K I +P++ ++ I GF KE+ L
Sbjct: 82 ILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 58 NQMVVKSI---NPDVYTFSILVDALCKEGKVKEAKN-VLAVMIKGGEKPDVVTYSSLMDG 113
QM+ PD +T+ +L +C + ++ + +L ++K + +++ +
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFK-VCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHM 200
Query: 114 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
+ ++ A +F+ D+ S++ +ING KI + A+ ++K M +E + PD
Sbjct: 201 FASCGDMENARKVFDESP----VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPD 256
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
VT L+ G ++ E + GL + ++L+D K + A +
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
++ + I+ ++T ++ G + G L ++++F D+ K DV + MI G +
Sbjct: 317 NLEKRTIV----SWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAK 368
Query: 294 LFDEALALMSKMEDNGCTPDAVT 316
+ALAL +M+ + PD +T
Sbjct: 369 RGQDALALFQEMQTSNTKPDEIT 391
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 14/273 (5%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+ ++IID K +L+++A L+ + +VV +TTLISGF + EA L QM
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFE----TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ +SI P+ T + ++ + G ++ K+V MI+ G + D V ++S +D Y +
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A +F+ M +V S+S MIN + ++AL+ F +M ++N+ P+ VT+ SL
Sbjct: 364 QMARTVFDMMPE----RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSL 419
Query: 181 IDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
+ SG + + W+ M G+ P Y+ ++D L + + A S I M
Sbjct: 420 LSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP--- 476
Query: 240 ILPDVYTYTILLDGLCKGGRLKD-AQEVFQDLL 271
+ P + LL C+ + D A E+ + LL
Sbjct: 477 VKPMASAWGALLSA-CRIHKEVDLAGEIAEKLL 508
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 8/190 (4%)
Query: 151 KIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 210
K +++D+A LF+ ++ +VV +++LI G K R +A++L +M + PN
Sbjct: 258 KCRLLDNARKLFET----SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 211 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL 270
T +++L + + + S+ M GI D +T +D + G ++ A+ VF D+
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF-DM 372
Query: 271 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDN 330
+ + +V +++ MIN +GLF+EAL KM+ P++VT+ ++ A G+
Sbjct: 373 MPE---RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 331 DKAEKLLRQM 340
+ K M
Sbjct: 430 KEGWKQFESM 439
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 14/241 (5%)
Query: 103 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 162
+VV +++L+ G+ +A D+F M R + P+ + + ++ + + ++
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 163 KQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 222
M I D V ++S ID + G I A + + M R NVI++SS+++A N
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER----NVISWSSMINAFGIN 391
Query: 223 HHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVR 280
+ A+ KMK Q ++P+ T+ LL G +K+ + F+ + + Y + +
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFES-MTRDYGVVPEEE 450
Query: 281 TYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA--LFQEGD--NDKAEKL 336
Y M++ L + G EA + + M P A + ++ A + +E D + AEKL
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMP---VKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 337 L 337
L
Sbjct: 508 L 508
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 169/340 (49%), Gaps = 36/340 (10%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
I L + +N+A + + K I ++ +++SG+ G KEA L ++M +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIG----SWNSIVSGYFSNGLPKEARQLFDEMSER-- 77
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
+V +++ LV K + EA+NV +M + +VV++++++ GY V +AE
Sbjct: 78 --NVVSWNGLVSGYIKNRMIVEARNVFELM----PERNVVSWTAMVKGYMQEGMVGEAES 131
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+F RM +V S+++M GL +D A L+ M + DVV +++I GLC
Sbjct: 132 LF---WRMPERNEV-SWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLC 183
Query: 186 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVY 245
+ GR+ +A + +EM R NV+T+++++ +N+ VD A L + M + +
Sbjct: 184 REGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV---- 235
Query: 246 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 305
++T +L G GR++DA+E F+ + +K V MI G + G +A + M
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLM 291
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
ED D T+ +I A ++G +A L QM +G+
Sbjct: 292 EDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 24/339 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ + L D ++ A LY M K DVV T +I G C G++ EA + ++M
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ +V T++ ++ + +V A+ + VM + E V+++S++ GY L +
Sbjct: 200 ER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE----VSWTSMLLGYTLSGRIE 251
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
AE+ F M + P V + + MI G ++ + A +F M D T+ +I
Sbjct: 252 DAEEFFEVMP---MKP-VIACNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMI 303
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
+ G +A +L +M +G+ P+ + S+L + + +
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
DVY ++L+ K G L A+ VF K D+ + +I+G GL +EAL +
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISGYASHGLGEEALKI 419
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M +G P+ VT I+ A G ++ ++ M
Sbjct: 420 FHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 13/260 (5%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+ DA + M K V+ +I GF VG++ +A + + M + D T+
Sbjct: 250 IEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLME----DRDNATWRG 301
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
++ A ++G EA ++ A M K G +P + S++ + + + + R +
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
DV S+++ K + A +F + ++ D++ ++S+I G G +A
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISGYASHGLGEEAL 417
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG-ILPDVYTYTILLDG 253
++ +EM S G PN +T ++L A ++ + + + M+ + + P V Y+ +D
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 254 LCKGGRLKDAQEVFQDLLIK 273
L + G++ A E+ + + IK
Sbjct: 478 LGRAGQVDKAMELIESMTIK 497
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 159/347 (45%), Gaps = 37/347 (10%)
Query: 2 YSTIIDSLCKD-KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y +I +L K +L N + LY ++++ + +I+ + G+++EA+ + ++
Sbjct: 75 YRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKI 134
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
P YT + L L V+++ + ++V
Sbjct: 135 PNFRCVPSAYTLNAL----------------LLVLVRKRQSLELVP-------------- 164
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+I RM + + ++ I+I+ LC+I VD A L + M +++ D YS L
Sbjct: 165 ----EILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRL 220
Query: 181 IDGLCKSGRIS--DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+ +CK S D + ++ P + Y+ ++ L + +S++ +MK
Sbjct: 221 LSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCD 280
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
+ PD+ YTI+L G+ A ++F +LL+ G DV TY + INGLCK + A
Sbjct: 281 RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGA 340
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
L +MS M G P+ VTY I+I AL + GD +A+ L ++M G+
Sbjct: 341 LKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 169/344 (49%), Gaps = 31/344 (9%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS----INPDVY 70
+ +A ++ ++ R P T L+ ++ + ++++ L+ +++VK+ + +
Sbjct: 124 IEEAIEVFFKIPNFRCVPSAYTLNALL---LVLVRKRQSLELVPEILVKACRMGVRLEES 180
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
TF IL+DALC+ G+V A ++ M + D YS L+ C +K F+ +
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVC----KHKDSSCFDVI 236
Query: 131 TRME------LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+E +P ++ Y++++ L + + +++ QM + + PD+V Y+ ++ G+
Sbjct: 237 GYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV 296
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
A +L +E+ GL P+V TY+ ++ LCK + ++ A+ ++ M G P+V
Sbjct: 297 IADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNV 356
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING-------LCKDGLFDE 297
TY IL+ L K G L A+ +++++ G N + T+ IMI+ +C GL +E
Sbjct: 357 VTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
A + + E +I L ++G D+A +LL ++
Sbjct: 417 AFNM-------NVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 2/272 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV--GQLKEAVGLLNQ 59
+ +ID+LC+ V+ A L M + D Y+ L+S C + +G L
Sbjct: 182 FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLED 241
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+ +P + +++++ L + G+ KE +VL M +PD+V Y+ ++ G +
Sbjct: 242 LRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED 301
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
KA+ +F+ + + LAPDV +Y++ INGLCK ++ AL + M+ P+VVTY+
Sbjct: 302 YPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
LI L K+G +S A L EM + G+ N T+ ++ A + V A L+++ +
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
+ ++ LC+ G + A E+ L+
Sbjct: 422 VFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
Query: 74 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 133
+++D +A +M K P + L+ C + KAE+ F ++
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKK 252
Query: 134 ELAPDVQSYSIMINGLCKIKM-VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
DV+ +++++NG C I V +A ++++M ITP+ +YS +I K G + D
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
+ L +EM RGL P + Y+SL+ L + D A+ L+KK+ +G+ PD TY ++
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
LC+ G+L A+ V ++ + + V T+ + + F++ L ++ +M+ + P
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGP 428
Query: 313 DAVTYEIIIYALFQEGDNDKAEKLLRQM 340
T+ +I+ LF+ + A K+ +M
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEM 456
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 4/207 (1%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I K + D+ LY EM + ++P + Y +L+ EA+ L+ ++
Sbjct: 297 YSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLN 356
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + PD T++ ++ LC+ GK+ A+NVLA MI P V T+ + ++ VN
Sbjct: 357 EEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEA---VN-FE 412
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
K ++ M +L P +++ +++ L K K ++AL ++ +M I + Y + I
Sbjct: 413 KTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATI 472
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPN 208
GL G + A E+ +EM S+G N
Sbjct: 473 QGLLSCGWLEKAREIYSEMKSKGFVGN 499
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLA-KRISP-DVVTYTTLISGFC-IVGQLKEAVGLLN 58
+ ++ +LC+ + A MLA K++ P DV + +++G+C I + EA +
Sbjct: 227 FQGLLCALCRHGHIEKAEEF---MLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWR 283
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+M I P+ ++S ++ K G + ++ + M K G P + Y+SL+ Y L
Sbjct: 284 EMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV--YVLTR 341
Query: 119 E--VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
E ++A + + L PD +Y+ MI LC+ +D A N+ M +EN++P V T
Sbjct: 342 EDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDT 401
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
+ + ++ + E++ +M L P T+ +L L K +NA+ + +M
Sbjct: 402 FHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMD 457
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
I+ + Y + GL G L+ A+E++ ++ KG+
Sbjct: 458 RFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 4/245 (1%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
V +A ++ EM I+P+ +Y+ +IS F VG L +++ L ++M + + P + ++
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
LV L +E EA ++ + + G KPD VTY+S++ C +++ A ++ TM
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISEN 394
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
L+P V ++ + + + L + QM ++ P T+ ++ L K + +A
Sbjct: 395 LSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENAL 450
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
++ EM + N Y + + L ++ A + +MK +G + + +L +
Sbjct: 451 KIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLLEEQK 510
Query: 255 CKGGR 259
KG R
Sbjct: 511 VKGVR 515
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 17/236 (7%)
Query: 113 GYCLVNEVNKAEDIFNTMTRMELAPDVQ-SYSIMINGLCKIKMVDDALNLFKQMHTENIT 171
+CL+ D+FN ++ D + + +M++ A+ F M T
Sbjct: 174 AWCLIR------DMFN------VSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHT 221
Query: 172 PDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PPNVITYSSLLDALCK-NHHVDNAI 229
P + L+ LC+ G I A E + + S+ L P +V ++ +L+ C V A
Sbjct: 222 PYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAK 279
Query: 230 SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
+ ++M + I P+ +Y+ ++ K G L D+ ++ ++ +G + Y ++ L
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 290 CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
++ FDEA+ LM K+ + G PD+VTY +I L + G D A +L MI+ L
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 135/270 (50%), Gaps = 18/270 (6%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
+++LCK+KLV +A ++ + L + I PD +TY T+I GFC VG L EA L N M+ +
Sbjct: 188 VETLCKEKLVEEAKFVFIK-LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGF 246
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
+ D+ +++ L K+ + EA V VM+ K G D Y ++D C ++ A
Sbjct: 247 DVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMAR 306
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
+F+ M + D +++ +I GL + V +A L + + EN PD+ Y LI GL
Sbjct: 307 KVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGV--EN--PDISIYHGLIKGL 362
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
K R S+A E+ +M RG P + TY LL + H + + +G P V
Sbjct: 363 VKIKRASEATEVFRKMIQRGCEPIMHTYLMLL----QGH--------LGRRGRKGPDPLV 410
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
TI + G+ K G+ + + + L +G
Sbjct: 411 NFDTIFVGGMIKAGKRLETTKYIERTLKRG 440
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 17 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILV 76
D + ++ + KR + T+ ++ +LK+ V + M +V T + V
Sbjct: 129 DLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGV 188
Query: 77 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 136
+ LCKE V+EAK V + +K KPD +TY +++ G+C V ++ +A ++N M
Sbjct: 189 ETLCKEKLVEEAKFVF-IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFD 247
Query: 137 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP-DVVTYSSLIDGLCKSGRISDAWE 195
D+++ ++ L K D+A +F M ++ D Y +ID LCK+GRI A +
Sbjct: 248 VDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARK 307
Query: 196 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
+ +EM RG+ + +T++SL+ L V A L++ +++ PD+ Y L+ GL
Sbjct: 308 VFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLV 363
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
K R +A EVF+ ++ +G + TY +++ G + + G P
Sbjct: 364 KIKRASEATEVFRKMIQRGCEPIMHTYLMLLQG------------HLGRRGRKGPDPLVN 411
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
I + + + G + K + + + RGL
Sbjct: 412 FDTIFVGGMIKAGKRLETTKYIERTLKRGL 441
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 161 LFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP------------- 207
L+ Q H + T T + ++ + S + WEL E+ RGL
Sbjct: 99 LYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLAS 158
Query: 208 ---------------------NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYT 246
NV T + ++ LCK V+ A + K+K + I PD T
Sbjct: 159 ARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLK-EFIKPDEIT 217
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM- 305
Y ++ G C G L +A +++ ++ +G+++D+ ++ L K FDEA + M
Sbjct: 218 YRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMV 277
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
G D Y ++I L + G D A K+ +M RG+
Sbjct: 278 SKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGV 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
Y +ID LCK+ ++ A ++ EM + + D +T+ +LI G + ++ EA GL+ +
Sbjct: 288 FYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGV 347
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 114
NPD+ + L+ L K + EA V MI+ G +P + TY L+ G+
Sbjct: 348 E----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGH 397
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 9/278 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISP-DVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+S + ++L K DA ++ ++L K P D T T +IS C G +K A+G+++
Sbjct: 141 FSIVAETLVKVGKEEDAIGIF-KILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHH 199
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE- 119
++ + L+ + VKEA+ V+ M G PD+ ++SL+ C N
Sbjct: 200 KDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVN 259
Query: 120 ------VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
V +A +I M ++ P SY+I+++ L + + V ++ + +QM PD
Sbjct: 260 RNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPD 319
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
+Y ++ L +GR ++V+EM RG P Y L+ LC V+ A+ L +
Sbjct: 320 TGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFE 379
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
KMK + Y +L+ LCKGG + +E++++ L
Sbjct: 380 KMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 135/282 (47%), Gaps = 7/282 (2%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
D TFSI+ + L K GK ++A + ++ K D T ++++ C V +A +
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM 196
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK- 186
+ + ++ Y ++ G + V +A + + M + ITPD+ ++SL+ LC+
Sbjct: 197 HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCER 256
Query: 187 ------SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
SG + +A ++ EM S + P ++Y+ LL L + V + ++++MK G
Sbjct: 257 NVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGC 316
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD +Y ++ L GR ++ +++ +G+ + + Y +I LC + AL
Sbjct: 317 DPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQ 376
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
L KM+ + Y+++I L + G+ +K +L + ++
Sbjct: 377 LFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALS 418
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 136 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWE 195
A D Q++SI+ L K+ +DA+ +FK + + D T +++I LC G + A
Sbjct: 135 AMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALG 194
Query: 196 LVNEMHSRGLPPNVIT-YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
+++ H + N ++ Y SLL +V A +I+ MK GI PD++ + LL L
Sbjct: 195 VMHH-HKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCL 253
Query: 255 CK-------GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
C+ G + +A + ++ +Y I+++ L + E+ ++ +M+
Sbjct: 254 CERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKR 313
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+GC PD +Y ++ L+ G K +++ +MI RG
Sbjct: 314 SGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC-------IVGQLKEA 53
+Y +++ + V +A + +M + I+PD+ + +L++ C G + EA
Sbjct: 210 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 269
Query: 54 VGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 113
+ ++ +M I P +++IL+ L + +V+E+ +L M + G PD +Y ++
Sbjct: 270 LNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRV 329
Query: 114 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
L K I + M P+ + Y +I LC ++ V+ AL LF++M ++
Sbjct: 330 LYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGY 389
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNE 199
Y LI LCK G EL E
Sbjct: 390 GQVYDLLIPKLCKGGNFEKGRELWEE 415
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 7/177 (3%)
Query: 2 YSTIIDSLCKDK-------LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV 54
+++++ LC+ LV +A N+ EM + +I P ++Y L+S +++E+
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305
Query: 55 GLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 114
+L QM +PD ++ +V L G+ + ++ MI+ G +P+ Y L+
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365
Query: 115 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 171
C V VN A +F M R + Q Y ++I LCK + L+++ + ++T
Sbjct: 366 CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVT 422
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 157/315 (49%), Gaps = 18/315 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+++++++ K L++DA L+ EM + +V++++ LI+G+ + G+ KEA+ L +M
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPER----NVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 62 VKSIN-----PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
+ N P+ +T S ++ A + G +++ K V A + K + D+V ++L+D Y
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-ENITPDVV 175
+ +A+ +FN + + DV++YS MI L + D+ LF +M T +NI P+ V
Sbjct: 247 CGSLERAKRVFNALGSKK---DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 303
Query: 176 TYSSLIDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
T+ ++ G I++ M G+ P++ Y ++D ++ + A S I
Sbjct: 304 TFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIAS 363
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 294
M + PDV + LL G G +K + + LI+ ++ Y ++ N K G
Sbjct: 364 MPME---PDVLIWGSLLSGSRMLGDIKTCEGALKR-LIELDPMNSGAYVLLSNVYAKTGR 419
Query: 295 FDEALALMSKMEDNG 309
+ E + +ME G
Sbjct: 420 WMEVKCIRHEMEVKG 434
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 137/302 (45%), Gaps = 23/302 (7%)
Query: 49 QLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
Q + + +M ++PD +TF L+ + + + A ++ G D +
Sbjct: 42 QRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRT 101
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
SL++ Y ++ A+ +F+ + D+ +++ ++N K ++DDA LF +M
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSG----SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP--------PNVITYSSLLDALC 220
N V+++S LI+G G+ +A +L EM LP PN T S++L A
Sbjct: 158 N----VISWSCLINGYVMCGKYKEALDLFREMQ---LPKPNEAFVRPNEFTMSTVLSACG 210
Query: 221 KNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 280
+ ++ + + + D+ T L+D K G L+ A+ VF L G DV+
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL---GSKKDVK 267
Query: 281 TYTIMINGLCKDGLFDEALALMSKM-EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
Y+ MI L GL DE L S+M + P++VT+ I+ A G ++ + +
Sbjct: 268 AYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKM 327
Query: 340 MI 341
MI
Sbjct: 328 MI 329
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 155/297 (52%), Gaps = 7/297 (2%)
Query: 52 EAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 111
EA+ +L + ++ D +++++ +G + A ++ M G PDV+TY+S++
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 112 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN-- 169
+GYC +++ A + M++ + + +YS ++ G+CK ++ AL L +M E+
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 170 --ITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 227
I+P+ VTY+ +I C+ R+ +A +++ M +RG PN +T L+ + +N
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVK 327
Query: 228 AIS-LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
A+S LI K+ G + ++ L + R ++A+++F+ +L++G D + +
Sbjct: 328 ALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVF 387
Query: 287 NGLCKDGLFDEALALMSKME--DNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
LC + + L ++E D T D+ + +++ L Q+G++ +A KL + M+
Sbjct: 388 RELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSML 444
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 135/276 (48%), Gaps = 28/276 (10%)
Query: 95 MIKGGEKPDVVTY--SSLMDGYCLVN------------EVNKAED---IFNTMTRMELAP 137
++K KPD++ Y S C VN + N A++ + +
Sbjct: 104 ILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCA 163
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
D +Y+++I ++ A L K+M + PDV+TY+S+I+G C +G+I DAW L
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG----ILPDVYTYTILLDG 253
EM N +TYS +L+ +CK+ ++ A+ L+ +M+ + I P+ TYT+++
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 254 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN----G 309
C+ R+++A V + +G + T ++I G+ ++ DE + +SK+ D G
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEN---DEDVKALSKLIDKLVKLG 340
Query: 310 CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ + +L + ++AEK+ R M+ RG+
Sbjct: 341 GVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGV 376
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 156/335 (46%), Gaps = 8/335 (2%)
Query: 5 IIDSLC-KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
I+ +LC + L ++A + + + D V Y +I F G L A L+ +M
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
+ PDV T++ +++ C GK+ +A + M K + VTYS +++G C ++ +A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 124 EDIFNTMTRME----LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
++ M + + ++P+ +Y+++I C+ + V++AL + +M P+ VT
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 180 LIDGLCKSGR-ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
LI G+ ++ + +L++++ G +SS +L + + A + + M +
Sbjct: 315 LIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVR 374
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIK--GYNLDVRTYTIMINGLCKDGLFD 296
G+ PD + + LC R D ++Q++ K +D + +++ GLC+ G
Sbjct: 375 GVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSW 434
Query: 297 EALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
EA L M D E II AL + GD D
Sbjct: 435 EAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDED 469
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 184 LCKSGRISD-AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
LC ++D A ++ + + + + Y+ ++ ++ A LIK+M G+ P
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP 198
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
DV TYT +++G C G++ DA + +++ L+ TY+ ++ G+CK G + AL L+
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 303 SKME--DNG--CTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ME D G +P+AVTY ++I A ++ ++A +L +M RG +
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 158/339 (46%), Gaps = 24/339 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ K K + +A + M + DVV++ T+I+G+ G++ EA L ++
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESP 277
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V+ DV+T++ +V + V+EA+ + M + E V++++++ GY +
Sbjct: 278 VQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERME 329
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A+++F+ M +V +++ MI G + + +A NLF +M D V+++++I
Sbjct: 330 MAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMI 381
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G +SG +A L +M G N ++SS L ++ L ++ G
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
+ LL CK G +++A ++F+++ K D+ ++ MI G + G + AL
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRF 497
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
M+ G PD T ++ A G DK + M
Sbjct: 498 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 13/309 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+I + +++A NL+ +M + D V++ +I+G+ G EA+ L QM
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + +FS + ++ K + ++KGG + ++L+ YC +
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A D+F M D+ S++ MI G + + AL F+ M E + PD T +++
Sbjct: 462 EANDLFKEMA----GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 182 DGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+G + + M G+ PN Y+ ++D L + +++A +L+K M +
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE-- 575
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
PD + LL G + A E D + + Y ++ N G + +
Sbjct: 576 -PDAAIWGTLLGASRVHGNTELA-ETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGK 633
Query: 301 LMSKMEDNG 309
L +M D G
Sbjct: 634 LRVRMRDKG 642
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 109/268 (40%), Gaps = 47/268 (17%)
Query: 103 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 162
D+ ++ + Y N+A +F M R SY+ MI+G + + A LF
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV----SYNGMISGYLRNGEFELARKLF 118
Query: 163 KQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL----------------- 205
+M D+V+++ +I G ++ + A EL M R +
Sbjct: 119 DEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 206 ----------PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC 255
N +++++LL A +N ++ A L K ++ ++ ++ LL G
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFV 230
Query: 256 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAV 315
K ++ +A++ F + ++ DV ++ +I G + G DEA L D D
Sbjct: 231 KKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVF 282
Query: 316 TYEIIIYALFQEGDNDKAEKLLRQMIAR 343
T+ ++ Q ++A +L +M R
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPER 310
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF-----CIVGQLKEAVGL 56
++ I S C+ +++ AY EM ++PDVVTYTTLIS C++G GL
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN-----GL 234
Query: 57 LNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
N MV+K P++ TF++ + L + +A ++L +M K +PD +TY+ ++ G+ L
Sbjct: 235 WNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFL 294
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
+ AE ++ M P+++ Y MI+ LCK D A + K + P++ T
Sbjct: 295 ARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDT 354
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
L+ GL K G++ A ++ +H R +PP
Sbjct: 355 VEMLLKGLVKKGQLDQAKSIMELVHRR-VPP 384
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELV 197
D S++I I C++ ++D A ++M +TPDVVTY++LI L K R L
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 198 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKG 257
N M +G PN+ T++ + L +A L+ M + PD TY +++ G
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 258 GRLKD-AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
R D A+ V+ + KGY +++ Y MI+ LCK G FD A + P+ T
Sbjct: 296 -RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDT 354
Query: 317 YEIIIYALFQEGDNDKAEKLL 337
E+++ L ++G D+A+ ++
Sbjct: 355 VEMLLKGLVKKGQLDQAKSIM 375
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D V++ I FC +G L A + +M + PDV T++ L+ AL K + +
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
+M+ G KP++ T++ + A D+ M ++++ PD +Y+++I G
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
+ D A ++ MH + P++ Y ++I LCK+G A+ + + + PN+ T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILP 242
LL L K +D A S++ ++ H+ + P
Sbjct: 356 EMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 2/205 (0%)
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
I+ D +F+I + + C+ G + A + M K G PDVVTY++L+
Sbjct: 173 IDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN 232
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
++N M P++ ++++ I L + DA +L M + PD +TY+ +I G
Sbjct: 233 GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGF 292
Query: 185 CKSGRISDAWELV-NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
+ R D E V MH +G PN+ Y +++ LCK + D A ++ K + P+
Sbjct: 293 FLA-RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQ 268
+ T +LL GL K G+L A+ + +
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 51 KEAVGLLNQMV-VKSINPDVYT-FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 108
K +V N + V S NPD++T + L DA K G + I D V+++
Sbjct: 138 KRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYG----------IDI------DAVSFN 181
Query: 109 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
+ +C + ++ A M + L PDV +Y+ +I+ L K + L+ M +
Sbjct: 182 IAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLK 241
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
P++ T++ I L R DA +L+ M + P+ ITY+ ++ D A
Sbjct: 242 GCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMA 301
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 288
+ M +G P++ Y ++ LCK G A + +D + K + ++ T +++ G
Sbjct: 302 ERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKG 361
Query: 289 LCKDGLFDEALALM 302
L K G D+A ++M
Sbjct: 362 LVKKGQLDQAKSIM 375
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
IM+ G K M AL+ F M V ++++ + L + + WE +++ S+
Sbjct: 113 IMLYG--KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSK 170
Query: 204 -GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKD 262
G+ + ++++ + + C+ +D A +++M+ G+ PDV TYT L+ L K R
Sbjct: 171 YGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVI 230
Query: 263 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIY 322
++ +++KG ++ T+ + I L +A L+ M PD++TY ++I
Sbjct: 231 GNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK 290
Query: 323 ALFQEGDNDKAEKLLRQMIARG 344
F D AE++ M +G
Sbjct: 291 GFFLARFPDMAERVYTAMHGKG 312
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 161/362 (44%), Gaps = 60/362 (16%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS--INPDVYTFSILVDALCKEGKVK- 86
++P + T+ L+ G L++A+ + M VK ++P VY++ ++ G VK
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM-------GCVKN 249
Query: 87 -EAKNVLAVMIK-----GGEKPDVVTYSSLMDGYCLVNEVNKAEDIF------NTMTRM- 133
+A VL + + GG D V Y LM GY + +A + + N+ RM
Sbjct: 250 SDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMS 309
Query: 134 -----------------------------------ELAPDVQSYSIMINGLCKIKMVDDA 158
LA ++ ++++M+NG C ++A
Sbjct: 310 AMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 218
+ +F+QM +PD +++++L++ LC + +++A +L EM + + P+ TY L+D
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 219 LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 278
K +D + K M + P++ Y L D L K G+L DA+ F D+++ +D
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMD 488
Query: 279 VRTYTIMINGLCKDGLFDEALALMSKM-EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
Y ++ L + G DE L ++ +M +D+ E + L + G EKL+
Sbjct: 489 DEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLM 548
Query: 338 RQ 339
+
Sbjct: 549 EE 550
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 145/327 (44%), Gaps = 16/327 (4%)
Query: 32 PDVVTYTTLISGF---CIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEA 88
P + T T+++ G L + G +NQ I P++ T++++ A K + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQA---GIAPNIITYNLIFQAYLDVRKPEIA 184
Query: 89 KNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
+ I P + T+ L+ G + + KA +I M D YS ++
Sbjct: 185 LEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM 244
Query: 148 GLCKIKMVDDALNLFKQMHTE--NITPDVVTYSSLIDGLCKSGRISDAWELVNEM--HSR 203
G K D L L++++ + D V Y L+ G +A E E +
Sbjct: 245 GCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENS 304
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP-----DVYTYTILLDGLCKGG 258
+ + + Y+ +L+AL +N D A+ L +K + P ++ T+ ++++G C GG
Sbjct: 305 KVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGG 364
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYE 318
+ ++A EVF+ + + D ++ ++N LC + L EA L +ME+ PD TY
Sbjct: 365 KFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYG 424
Query: 319 IIIYALFQEGDNDKAEKLLRQMIARGL 345
+++ F+EG D+ + M+ L
Sbjct: 425 LLMDTCFKEGKIDEGAAYYKTMVESNL 451
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 150/327 (45%), Gaps = 16/327 (4%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS-INPDVYTFSILVDALCKEGKVKEA 88
I+P+++TY + + V + + A+ + + +NP + TF ILV L +++A
Sbjct: 161 IAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKA 220
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME-----LAPDVQSYS 143
+ M G D V YS LM G C+ N + A+ + ++ D Y
Sbjct: 221 MEIKEDMAVKGFVVDPVVYSYLMMG-CVKN--SDADGVLKLYQELKEKLGGFVDDGVVYG 277
Query: 144 IMINGLCKIKMVDDALNLFKQMHTEN--ITPDVVTYSSLIDGLCKSGRISDAWELVNEMH 201
++ G +M +A+ +++ EN + + Y+ +++ L ++G+ +A +L + +
Sbjct: 278 QLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVK 337
Query: 202 SRGLPP-----NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCK 256
PP N+ T++ +++ C + A+ + ++M PD ++ L++ LC
Sbjct: 338 KEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCD 397
Query: 257 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
L +A++++ ++ K D TY ++++ K+G DE A M ++ P+
Sbjct: 398 NELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAV 457
Query: 317 YEIIIYALFQEGDNDKAEKLLRQMIAR 343
Y + L + G D A+ M+++
Sbjct: 458 YNRLQDQLIKAGKLDDAKSFFDMMVSK 484
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 162/366 (44%), Gaps = 55/366 (15%)
Query: 15 VNDAYNLYSEMLAKRISPD--VVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTF 72
+NDA+ L+ E+ PD VVT+T L SG+ G+ +EA+ L +MV + PD Y
Sbjct: 162 LNDAHKLFDEI------PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFI 215
Query: 73 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 132
++ A G + + ++ M + + + ++L++ Y ++ KA +F++M
Sbjct: 216 VQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-- 273
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD---VVTY------------ 177
+ D+ ++S MI G + + LF QM EN+ PD +V +
Sbjct: 274 --VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Query: 178 --------------------SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
++LID K G ++ +E+ EM + +++ ++ +
Sbjct: 332 GEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK----DIVIMNAAIS 387
Query: 218 ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL-LIKGYN 276
L KN HV + ++ + + GI PD T+ LL G G ++D F + +
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
V Y M++ + G+ D+A L+ M P+A+ + ++ D AE +
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMP---MRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 337 LRQMIA 342
L+++IA
Sbjct: 505 LKELIA 510
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 166 HTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 225
HT+ P++ Y+SLI+G + + +L + GL + T+ +L A +
Sbjct: 70 HTQ--FPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSR 127
Query: 226 DNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
I L + G DV T LL GRL DA ++F ++ + V T+T +
Sbjct: 128 KLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP----DRSVVTWTAL 183
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+G G EA+ L KM + G PD+ ++ A GD D E +++ M
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 146/344 (42%), Gaps = 18/344 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ST+I + + L+ +ML + + PD + +S +G L ++ +
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+++ + L+D K G + V M ++ D+V ++ + G V
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM----KEKDIVIMNAAISGLAKNGHVK 396
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH-TENITPDVVTYSSL 180
+ +F ++ ++PD ++ ++ G ++ D L F + + V Y +
Sbjct: 397 LSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCM 456
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+D ++G + DA+ L+ +M R PN I + +LL A +++K++ +
Sbjct: 457 VDLWGRAGMLDDAYRLICDMPMR---PNAIVWGALLSGCRLVKDTQLAETVLKEL--IAL 511
Query: 241 LP-DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT-IMINGLCKDGLFDEA 298
P + Y L + GGR +A EV +D++ K + Y+ I + G + L D+
Sbjct: 512 EPWNAGNYVQLSNIYSVGGRWDEAAEV-RDMMNKKGMKKIPGYSWIELEGKVHEFLADDK 570
Query: 299 LALMS-----KMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
+S K+ED G + + +F + + ++ E++L
Sbjct: 571 SHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVL 614
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 1/291 (0%)
Query: 24 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEG 83
EM+ + D +TY+T+I+ +A+ +M + PD T+S ++D K G
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 84 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 143
KV+E ++ + G KPD + +S L + + + + M M++ P+V Y+
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 144 IMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR 203
++ + + A +LF +M +TP+ T ++L+ K+ DA +L EM ++
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 204 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPDVYTYTILLDGLCKGGRLKD 262
P + I Y++LL+ + A L MK PD ++YT +L+ GG+ +
Sbjct: 391 KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 263 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPD 313
A E+F+++L G ++V T ++ L K D+ + + G PD
Sbjct: 451 AMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 3/253 (1%)
Query: 95 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 154
M+K G + D +TYS+++ N NKA + F M + L PD +YS +++ K
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 155 VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 214
V++ L+L+++ PD + +S L ++G ++ EM S + PNV+ Y++
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 215 LLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
LL+A+ + A SL +M G+ P+ T T L+ K +DA ++++++ K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 275 YNLDVRTYTIMINGLCKD-GLFDEALALMSKMEDN-GCTPDAVTYEIIIYALFQEGDNDK 332
+ +D Y ++N +C D GL +EA L + M+++ C PD +Y ++ G +K
Sbjct: 392 WPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 333 AEKLLRQMIARGL 345
A +L +M+ G+
Sbjct: 451 AMELFEEMLKAGV 463
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 1/280 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YSTII + L N A + M + PD VTY+ ++ + G+++E + L + V
Sbjct: 224 YSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAV 283
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
PD FS+L + G + VL M KP+VV Y++L++ +
Sbjct: 284 ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPG 343
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A +FN M L P+ ++ + ++ K + DAL L+++M + D + Y++L+
Sbjct: 344 LARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL 403
Query: 182 DGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+ G +A L N+M S P+ +Y+++L+ + A+ L ++M G+
Sbjct: 404 NMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 280
+V T L+ L K R+ D VF + +G D R
Sbjct: 464 QVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDR 503
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 186 KSGRISDAWELVNEMH----SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
KS R ++L+ EM G+ + ITYS+++ + + + AI ++M G++
Sbjct: 194 KSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLM 253
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
PD TY+ +LD K G++++ +++ + G+ D ++++ + G +D +
Sbjct: 254 PDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYV 313
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ +M+ P+ V Y ++ A+ + G A L +M+ GL
Sbjct: 314 LQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+T+++++ + A +L++EML ++P+ T T L+ + ++A+ L +M
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNE 119
K D ++ L++ G +EA+ + M + + +PD +Y+++++ Y +
Sbjct: 388 KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD 173
KA ++F M + + +V + ++ L K K +DD + +F + PD
Sbjct: 448 AEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 154/322 (47%), Gaps = 15/322 (4%)
Query: 22 YSEMLAKRIS-PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS--INPDVYTFSILVDA 78
Y+ ++ RI+ + + T+I GF + A+ + M+ S + P T+ + A
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 79 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 138
+ G+ ++ + + ++IK G + D ++++ Y + +A IF M + D
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFD 191
Query: 139 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN 198
V +++ MI G K ++D A NLF +M N V+++S+I G ++GR DA ++
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN----GVSWNSMISGFVRNGRFKDALDMFR 247
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
EM + + P+ T SLL+A + + + + + T L+D CK G
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYE 318
+++ VF+ K + + MI GL +G + A+ L S++E +G PD+V++
Sbjct: 308 CIEEGLNVFECAPKK----QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFI 363
Query: 319 IIIYALFQEGDNDKAEKLLRQM 340
++ A G+ +A++ R M
Sbjct: 364 GVLTACAHSGEVHRADEFFRLM 385
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 157/328 (47%), Gaps = 25/328 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++++I K L++ A NL+ EM + + V++ ++ISGF G+ K+A+ + +M
Sbjct: 195 WNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K + PD +T L++A G ++ + + +++ + + + ++L+D YC +
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 122 KAEDIFNTMTRMELAPDVQ--SYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+ ++F E AP Q ++ MI GL + A++LF ++ + PD V++
Sbjct: 311 EGLNVF------ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIG 364
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGL-PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
++ SG + A E M + + P++ Y+ +++ L ++ A +LIK M
Sbjct: 365 VLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMP-- 422
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT-YTIMINGLCKDGLFDE 297
+ D ++ LL K G ++ A+ + L K + D Y ++ N GLF+E
Sbjct: 423 -VEEDTVIWSSLLSACRKIGNVEMAKRAAKCL--KKLDPDETCGYVLLSNAYASYGLFEE 479
Query: 298 ALALMSKMEDN------GCTPDAVTYEI 319
A+ M++ GC+ V +E+
Sbjct: 480 AVEQRLLMKERQMEKEVGCSSIEVDFEV 507
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 158/366 (43%), Gaps = 54/366 (14%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
MY++++ L ++ DA L+ M D V++ +I G G KEA+ +M
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V+ + D Y F ++ A G + E K + A +I+ + + S+L+D YC +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD------- 173
+ A+ +F+ M + +V S++ M+ G + ++A+ +F M I PD
Sbjct: 322 HYAKTVFDRMKQ----KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 174 ----------------------------VVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
V +SL+ K G I D+ L NEM+ R
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-- 435
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
+ +++++++ A + I L KM G+ PD T T ++ + G ++ Q
Sbjct: 436 --DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 266 VFQDLLIKGYNL--DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
F+ L+ Y + + Y+ MI+ + G +EA+ ++ M PDA+ + ++ A
Sbjct: 494 YFK-LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSA 549
Query: 324 LFQEGD 329
+G+
Sbjct: 550 CRNKGN 555
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 14/315 (4%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVK-SINPDVYTFSILVDALCKEGKVKEAKNV 91
D VT+ LI G+ + G + AV N M+ S N T ++ G V K +
Sbjct: 102 DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQI 161
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
+IK G + ++ S L+ Y V ++ A+ +F + + Y+ ++ GL
Sbjct: 162 HGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLA 217
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
M++DAL LF+ M D V+++++I GL ++G +A E EM +GL +
Sbjct: 218 CGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP 272
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
+ S+L A ++ + + +Y + L+D CK L A+ VF +
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
K +V ++T M+ G + G +EA+ + M+ +G PD T I A +
Sbjct: 333 QK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 332 KAEKLLRQMIARGLL 346
+ + + I GL+
Sbjct: 389 EGSQFHGKAITSGLI 403
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 159/330 (48%), Gaps = 28/330 (8%)
Query: 2 YSTIIDSLCKD-KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++++ + KD + +A+ L+ E+ PD +Y ++S + ++A ++M
Sbjct: 95 WNSLLIGISKDPSRMMEAHQLFDEI----PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM 150
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
K D +++ ++ + G++++A+ + M++ E V++++++ GY ++
Sbjct: 151 PFK----DAASWNTMITGYARRGEMEKARELFYSMMEKNE----VSWNAMISGYIECGDL 202
Query: 121 NKAEDIFNTMTRMELAP--DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
KA F ++AP V +++ MI G K K V+ A +FK M + ++VT++
Sbjct: 203 EKASHFF------KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM---TVNKNLVTWN 253
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
++I G ++ R D +L M G+ PN SS L + + + + +
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
+ DV T L+ CK G L DA ++F+ + K DV + MI+G + G D+A
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKA 369
Query: 299 LALMSKMEDNGCTPDAVTYEIIIYALFQEG 328
L L +M DN PD +T+ ++ A G
Sbjct: 370 LCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 140/310 (45%), Gaps = 53/310 (17%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D ++ T+I+G+ G++++A L M+ K + +++ ++ + G +++A +
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFF 209
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
V G VV +++++ GY +V AE +F MT + ++ +++ MI+G +
Sbjct: 210 KVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVEN 262
Query: 153 KMVDDALNLFKQMHTENITP-----------------------------------DVVTY 177
+D L LF+ M E I P DV
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 322
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+SLI CK G + DAW+L M + +V+ +++++ ++ + D A+ L ++M
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT--YTIMINGLCKDGLF 295
I PD T+ +L G + F+ +++ Y ++ + YT M++ L + G
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFES-MVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 296 DEALALMSKM 305
+EAL L+ M
Sbjct: 438 EEALKLIRSM 447
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 159/340 (46%), Gaps = 32/340 (9%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI-VGQLKEAVGLLNQMVVK 63
II + ++ A ++ M AK + +T+ +L+ G ++ EA L +++
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEIP-- 120
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
PD ++++I++ + ++A++ M D ++++++ GY E+ KA
Sbjct: 121 --EPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGYARRGEMEKA 174
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP--DVVTYSSLI 181
++F +M + + S++ MI+G + ++ A + FK + P VV ++++I
Sbjct: 175 RELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFK------VAPVRGVVAWTAMI 224
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 241
G K+ ++ A + +M + N++T+++++ +N ++ + L + M +GI
Sbjct: 225 TGYMKAKKVELAEAMFKDM---TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 301
P+ + L G + L+ +++ Q + DV T +I+ CK G +A L
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 302 MSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
M+ D V + +I Q G+ DKA L R+MI
Sbjct: 342 FEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMI 377
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 166/354 (46%), Gaps = 43/354 (12%)
Query: 23 SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKE 82
S + +SP+VV++TTLI G G +++ GLL +MV + + P+V T S ++ A K
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 83 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI---------------- 126
V+ + A +++ ++V +SL+D Y +V+ A ++
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLV 500
Query: 127 --FNTMTRMELAPDVQSY---------SIMINGLCKIKMVDDALNLFKQMHTENI----T 171
FN + + E+A V +Y + + G AL K +H ++ +
Sbjct: 501 TRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFS 560
Query: 172 PDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
+SL+D K G + DA ++ E+ + P+V++++ L+ L N + +A+S
Sbjct: 561 GAASVLNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGLASNGFISSALSA 616
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKD-AQEVFQDLLIKGYNLD--VRTYTIMING 288
++M+ + PD T+ ILL C GRL D E FQ ++ K YN++ V Y ++
Sbjct: 617 FEEMRMKETEPDSVTFLILLSA-CSNGRLTDLGLEYFQ-VMKKIYNIEPQVEHYVHLVGI 674
Query: 289 LCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
L + G +EA ++ M P+A+ ++ ++ A G+ E + + +A
Sbjct: 675 LGRAGRLEEATGVVETMH---LKPNAMIFKTLLRACRYRGNLSLGEDMANKGLA 725
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 17 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILV 76
+A L+ EM + V +T +IS F + A+ L +M+ +P+ +TFS +V
Sbjct: 76 NARKLFDEMSHR----TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVV 131
Query: 77 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 136
+ + V +IK G + + V SSL D Y + +A ++F+++
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN---- 187
Query: 137 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWEL 196
D S+++MI+ L + +AL + +M + P+ T+ L+ G E
Sbjct: 188 ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-----LEF 242
Query: 197 VNEMHS----RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
+HS RG+P NV+ +SL+D + +++A+ ++ Q DV+ +T ++
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ----DVFLWTSVVS 298
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
G + R K+A F ++ G + TY+ +++ LC
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS-LC 335
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 159/358 (44%), Gaps = 49/358 (13%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I SL + +A YSEM+ + P+ T+ L+ +G L+ + + ++
Sbjct: 193 WTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNII 251
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V+ I +V + LVD + K+++A VL GE+ DV ++S++ G+
Sbjct: 252 VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN---SSGEQ-DVFLWTSVVSGFVRNLRAK 307
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI----------- 170
+A F M + L P+ +YS +++ ++ +L+ KQ+H++ I
Sbjct: 308 EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR----SLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 171 -------------------------TPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
+P+VV++++LI GL G + D + L+ EM R +
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
PNV+T S +L A K HV + + + + + ++ L+D ++ A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
V + + + D TYT ++ + G + AL++++ M +G D ++ I A
Sbjct: 484 VIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA 537
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+ N L + + D + +++ E V ++ +I KS + A L EM + G
Sbjct: 60 LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG 119
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQ 264
PN T+SS++ + + + + G + + L D K G+ K+A
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 265 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTY 317
E+F L N D ++T+MI+ L + EAL S+M G P+ T+
Sbjct: 180 ELFSSL----QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 45/341 (13%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
P+V Y L GF ++ L +M+ S++P YT+S LV A + E+ +
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGES--L 891
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
A + K G V ++L+D Y + +A +F+ M + D+ +++ M++ +
Sbjct: 892 QAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERD---DI-AWTTMVSAYRR 947
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
+ +D A +L QM +N T + LI+G G + A L N+M + ++I+
Sbjct: 948 VLDMDSANSLANQMSEKN----EATSNCLINGYMGLGNLEQAESLFNQMPVK----DIIS 999
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
+++++ +N AI++ KM +GI+PD T + ++ G L+ +EV L
Sbjct: 1000 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 1059
Query: 272 IKGYNLDVRT-------------------------------YTIMINGLCKDGLFDEALA 300
G+ LDV + +I GL G EAL
Sbjct: 1060 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALK 1119
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMI 341
+ +KME P+AVT+ + A G D+ ++ R MI
Sbjct: 1120 MFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI 1160
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 12/259 (4%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+ A +L+++M K D++++TT+I G+ + +EA+ + +M+ + I PD T S
Sbjct: 982 LEQAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMST 1037
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
++ A G ++ K V ++ G DV S+L+D Y + +A +F + +
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKN 1097
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
L ++ +I GL +AL +F +M E++ P+ VT+ S+ +G + +
Sbjct: 1098 LF----CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 1153
Query: 195 ELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDG 253
+ M + NV Y ++ K + A+ LI M+ + P+ + LLDG
Sbjct: 1154 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDG 1210
Query: 254 LCKGGRLKDAQEVFQDLLI 272
L A+ F L++
Sbjct: 1211 CRIHKNLVIAEIAFNKLMV 1229
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 20/279 (7%)
Query: 45 CIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 104
C +L E+ L M+ S+N D + + A ++ A + + M ++P+V
Sbjct: 783 CSTPKLLESA--LAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQM----QEPNV 836
Query: 105 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 164
Y++L G+ + ++ +++ M R ++P +YS ++ ++L
Sbjct: 837 FVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQ--AH 894
Query: 165 MHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 224
+ V ++LID +GRI +A ++ +EM R + I +++++ A +
Sbjct: 895 IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLD 950
Query: 225 VDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
+D+A SL +M + + T L++G G L+ A+ +F + +K D+ ++T
Sbjct: 951 MDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQAESLFNQMPVK----DIISWTT 1002
Query: 285 MINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
MI G ++ + EA+A+ KM + G PD VT +I A
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISA 1041
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 14/314 (4%)
Query: 28 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKE 87
+R DV ++ +ISG+ + + +E++ LL +M ++P T +LV + C + K K+
Sbjct: 195 RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTL-LLVLSACSKVKDKD 253
Query: 88 -AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
K V + + +P + ++L++ Y E++ A IF +M A DV S++ ++
Sbjct: 254 LCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK----ARDVISWTSIV 309
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
G + + A F QM D ++++ +IDG ++G +++ E+ EM S G+
Sbjct: 310 KGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P+ T S+L A ++ + + I DV L+D K G + AQ+V
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 267 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQ 326
F D+ + D T+T M+ GL +G EA+ + +M+D PD +TY ++ A
Sbjct: 426 FHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNH 481
Query: 327 EGDNDKAEKLLRQM 340
G D+A K +M
Sbjct: 482 SGMVDQARKFFAKM 495
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 160/358 (44%), Gaps = 38/358 (10%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
V+ AY L+ K PDVV + +I G+ V E V L M+ + + PD +TF
Sbjct: 84 VSYAYKLF----VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPF 139
Query: 75 LVDALCKEG-KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 133
L++ L ++G + K + ++K G ++ ++L+ Y L ++ A +F+ +
Sbjct: 140 LLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK- 198
Query: 134 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDA 193
DV S+++MI+G ++K ++++ L +M ++P VT L+ C + D
Sbjct: 199 ---EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLL-LVLSACSKVKDKDL 254
Query: 194 WELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP---------- 242
+ V+E S P++ ++L++A +D A+ + + MK + ++
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVE 314
Query: 243 -----------------DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 285
D ++TI++DG + G ++ E+F+++ G D T +
Sbjct: 315 RGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSV 374
Query: 286 INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+ G + + + ++ N D V +I F+ G ++KA+K+ M R
Sbjct: 375 LTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 16/267 (5%)
Query: 11 KDKLVNDAYNLYSEM-LAKRI-----SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++ LVN AY EM +A RI + DV+++T+++ G+ G LK A +QM V+
Sbjct: 274 ENALVN-AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR- 331
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
D +++I++D + G E+ + M G PD T S++ + + E
Sbjct: 332 ---DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGL 184
I + + ++ DV + +I+ K + A +F M D T+++++ GL
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTAMVVGL 444
Query: 185 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH-QGILPD 243
+G+ +A ++ +M + P+ ITY +L A + VD A KM+ I P
Sbjct: 445 ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDL 270
+ Y ++D L + G +K+A E+ + +
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKM 531
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 142/301 (47%), Gaps = 27/301 (8%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +ID + N++ ++ EM + + PD T ++++ +G L+ + +
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I DV + L+D K G ++A+ V M ++ D T+++++ G +
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM----DQRDKFTWTAMVVGLANNGQGQ 451
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN-ITPDVVTYSSL 180
+A +F M M + PD +Y +++ MVD A F +M +++ I P +V Y +
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+D L ++G + +A+E++ +M + PN I + +LL A H D ++ + K +
Sbjct: 512 VDMLGRAGLVKEAYEILRKM---PMNPNSIVWGALLGA--SRLHNDEPMAELAAKKILEL 566
Query: 241 LPD---VYTYTILLDGLCKGGRLKDAQEVFQ---DLLIK---GYNLDVRTYTIMINGLCK 291
PD VY + CK R KD +EV + D+ IK G++L I +NG
Sbjct: 567 EPDNGAVYALLCNIYAGCK--RWKDLREVRRKIVDVAIKKTPGFSL------IEVNGFAH 618
Query: 292 D 292
+
Sbjct: 619 E 619
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 173/415 (41%), Gaps = 89/415 (21%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+I K++ + +A L+ +M + + V+++ +I+GFC G++ AV L +M
Sbjct: 139 WNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM--IKGGEKPDVVTYSSLMDGYCLVNE 119
VK +P LV L K ++ EA VL + G + V Y++L+ GY +
Sbjct: 195 VKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ 250
Query: 120 VNKAEDIFNTMT-----------RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 168
V A +F+ + R +V S++ MI K+ V A LF QM
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEM-----HSRGL------------------ 205
D ++++++IDG R+ DA+ L +EM HS +
Sbjct: 311 ----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYF 366
Query: 206 ----PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDG-------- 253
+ ++++S++ A KN A+ L +M +G PD +T T LL
Sbjct: 367 EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLR 426
Query: 254 --------------------------LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 287
+ G + +++ +F ++ +K +V T+ MI
Sbjct: 427 LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK---REVITWNAMIG 483
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
G G EAL L M+ NG P +T+ ++ A G D+A+ M++
Sbjct: 484 GYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMS 538
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 36/284 (12%)
Query: 76 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 135
++ + + G + EA+++ + E + VT+++++ GY E+N+A +F+ M +
Sbjct: 47 LNQMIRSGYIAEARDIFEKL----EARNTVTWNTMISGYVKRREMNQARKLFDVMPKR-- 100
Query: 136 APDVQSYSIMINGLCK---IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
DV +++ MI+G I+ +++A LF +M + D +++++I G K+ RI +
Sbjct: 101 --DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGE 154
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
A L +M R N +++S+++ C+N VD+A+ L +KM + D L+
Sbjct: 155 ALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMP----VKDSSPLCALVA 206
Query: 253 GLCKGGRLKDAQEVFQDL--LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM----- 305
GL K RL +A V L+ G V Y +I G + G + A L ++
Sbjct: 207 GLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCG 266
Query: 306 EDNGCT------PDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+D+G + V++ +I A + GD A L QM R
Sbjct: 267 DDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 172/364 (47%), Gaps = 54/364 (14%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ---LKEAVGLLN 58
++T+I K + +N A L+ +++ KR DVVT+ T+ISG+ G L+EA L +
Sbjct: 74 WNTMISGYVKRREMNQARKLF-DVMPKR---DVVTWNTMISGYVSCGGIRFLEEARKLFD 129
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+M + D ++++ ++ K ++ EA L + K E+ + V++S+++ G+C
Sbjct: 130 EMPSR----DSFSWNTMISGYAKNRRIGEA---LLLFEKMPER-NAVSWSAMITGFCQNG 181
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-----ENITPD 173
EV+ A +F M + +P ++ GL K + + +A + Q + E++
Sbjct: 182 EVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL--- 234
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEM-----------HSRGLPPNVITYSSLLDALCKN 222
V Y++LI G + G++ A L +++ NV++++S++ A K
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 223 HHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
V +A L +MK + D ++ ++DG R++DA +F ++ N D ++
Sbjct: 295 GDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMP----NRDAHSW 346
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPD--AVTYEIIIYALFQEGDNDKAEKLLRQM 340
+M++G G + A K TP+ V++ II A + D +A L +M
Sbjct: 347 NMMVSGYASVGNVELARHYFEK------TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 341 IARG 344
G
Sbjct: 401 NIEG 404
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 145/323 (44%), Gaps = 21/323 (6%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+ID + DA+ L+SEM + D ++ ++SG+ VG V L
Sbjct: 315 WNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGN----VELARHYF 366
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K+ +++ ++ A K KEA ++ M GEKPD T +SL+ + +
Sbjct: 367 EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLR 426
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + + + PDV ++ +I + + ++ +F +M + +V+T++++I
Sbjct: 427 LGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMI 482
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA-ISLIKKMKHQGI 240
G G S+A L M S G+ P+ IT+ S+L+A VD A + M I
Sbjct: 483 GGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKI 542
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK----DGLFD 296
P + Y+ L++ G+ ++A + + + D + +++ C+ GL
Sbjct: 543 EPQMEHYSSLVNVTSGQGQFEEAMYIITSM---PFEPDKTVWGALLDA-CRIYNNVGLAH 598
Query: 297 EALALMSKMEDNGCTPDAVTYEI 319
A MS++E TP + Y +
Sbjct: 599 VAAEAMSRLEPESSTPYVLLYNM 621
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 165/347 (47%), Gaps = 2/347 (0%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +I S + + DA +Y+ + ++ +T+I + ++G+ EA L +
Sbjct: 525 LYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNL 584
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNE 119
+ D FSI+V K G ++EA +VL +M + + PDV + ++ Y +
Sbjct: 585 KSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDL 644
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+K + ++ + + + + + Y+ +IN + +D+ F++M TP+ VT++
Sbjct: 645 QDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNV 704
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
L+D K+ EL G+ +VI+Y++++ A KN N S IK M+ G
Sbjct: 705 LLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDG 763
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ Y LLD K +++ + + + + D TY IMIN + G DE
Sbjct: 764 FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVA 823
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
++ +++++G PD +Y +I A G ++A L+++M R ++
Sbjct: 824 DVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 138/308 (44%), Gaps = 20/308 (6%)
Query: 10 CKDKLVND--AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINP 67
C KLV + AY+L +L +R D LI C + +++ + N ++
Sbjct: 166 CNGKLVGNFVAYSLILRVLGRREEWDRAE--DLIKELCGFHEFQKSYQVFNTVIY----- 218
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
A K+G VK A +M++ G +P+V T LM Y V +AE F
Sbjct: 219 ----------ACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAF 268
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
+ M + + + +YS MI ++++ D A + M + + + + +++ +
Sbjct: 269 SHMRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQ 327
Query: 188 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTY 247
G++ A ++ M + G PN+I Y++L+ K ++ A L ++ + G+ PD +Y
Sbjct: 328 GKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSY 387
Query: 248 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 307
+++G + ++A+ +Q+L GY + +IN K G D A+ + M
Sbjct: 388 RSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTG 447
Query: 308 NGCTPDAV 315
GC ++
Sbjct: 448 IGCQYSSI 455
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 5/242 (2%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK--EAVGLLN 58
MY+ +I+ + +++ + EM+ +P+ VT+ L+ + G+ K + V L
Sbjct: 666 MYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD---VYGKAKLFKKVNELF 722
Query: 59 QMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+ + DV +++ ++ A K + + M G + Y++L+D Y
Sbjct: 723 LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
++ K I M + PD +Y+IMIN + +D+ ++ K++ + PD+ +Y+
Sbjct: 783 QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYN 842
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+LI G + +A LV EM R + P+ +TY++L+ AL +N AI MK
Sbjct: 843 TLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQM 902
Query: 239 GI 240
GI
Sbjct: 903 GI 904
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 117/244 (47%), Gaps = 1/244 (0%)
Query: 20 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDAL 79
+LY + I + Y +I+ L E G +M+ P+ TF++L+D
Sbjct: 650 HLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY 709
Query: 80 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 139
K K+ + N L ++ K DV++Y++++ Y + M + +
Sbjct: 710 GK-AKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSL 768
Query: 140 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNE 199
++Y+ +++ K K ++ ++ K+M PD TY+ +I+ + G I + +++ E
Sbjct: 769 EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKE 828
Query: 200 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGR 259
+ GL P++ +Y++L+ A V+ A+ L+K+M+ + I+PD TYT L+ L +
Sbjct: 829 LKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDE 888
Query: 260 LKDA 263
+A
Sbjct: 889 FLEA 892
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 157/349 (44%), Gaps = 21/349 (6%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS++I + +L + A + M R+ + + +++ + G+++ A +L M
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+P++ ++ L+ K K++ A+ + + G +PD +Y S+++G+ +
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A+ + + R P+ + +IN K D A+ E++T YSS++
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTI-----EDMTGIGCQYSSIL 456
Query: 182 DGLCKSGRISDAWELVNEM----------HSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
G I A+E V ++ + N ++SSL+ A K+ VD+ + L
Sbjct: 457 ------GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGL 510
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
+++ K + + + Y +L+ + G+L DA +++ + +++ + MI+
Sbjct: 511 LREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTV 570
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
G F EA L ++ +G D + + I++ + G ++A +L M
Sbjct: 571 MGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 146/345 (42%), Gaps = 41/345 (11%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM-V 61
ST+ID ++A LY + + + D + ++ ++ + G L+EA +L M
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Query: 62 VKSINPDVYTF-----------------------------------SILVDALCKEGKVK 86
K I PDVY F + +++ + +
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
E MI+ G P+ VT++ L+D Y K ++F R + DV SY+ +I
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTII 740
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 206
K K + + K M + + + Y++L+D K ++ ++ M
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG 800
Query: 207 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEV 266
P+ TY+ +++ + +D ++K++K G+ PD+ +Y L+ GG +++A +
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL 860
Query: 267 FQDLLIKGYNL--DVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+++ +G N+ D TYT ++ L ++ F EA+ M+ G
Sbjct: 861 VKEM--RGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 129/321 (40%), Gaps = 2/321 (0%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y ++I+ + +A + Y E+ P+ TLI+ G A+ + M
Sbjct: 387 YRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMT 446
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
I++ A K GK+ VL + + ++SSL+ Y V+
Sbjct: 447 GIGCQYSS-ILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVD 505
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + A + Y ++I + + DA+ ++ + ++ S++I
Sbjct: 506 DCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMI 565
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG-I 240
D G S+A +L + S G+ + I +S ++ K ++ A S+++ M Q I
Sbjct: 566 DIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDI 625
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+PDVY + +L K Q ++ + G + + Y +IN + DE
Sbjct: 626 VPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSG 685
Query: 301 LMSKMEDNGCTPDAVTYEIII 321
+M G TP+ VT+ +++
Sbjct: 686 TFEEMIRYGFTPNTVTFNVLL 706
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 16/220 (7%)
Query: 134 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPDVVTYSSLIDGLCKSGRISD 192
+L + +YS+++ L + + D A +L K++ ++++I K G +
Sbjct: 169 KLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKL 228
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD------VYT 246
A + + M G+ PNV T L+ KN +V+ A M+ GI+ + +
Sbjct: 229 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITI 288
Query: 247 YTILLDGLCKGGRLKDAQEVFQDLLIKGY-NLDVRTYTIMINGLCKDGLFDEALALMSKM 305
YT L RL D E DL+ + L + + +M+N + G + A +++ M
Sbjct: 289 YTRL--------RLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 306 EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
E G +P+ + Y +I + + A+ L ++ GL
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGL 380
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 22/347 (6%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
++D K ++++A ++S M K DVV++ +++G+ +G+ ++AV L +M +
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
I DV T+S + + G EA V M+ G KP+ VT S++ G V + +
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 125 DIFNTMTRMELAPDVQSY---SIMINGL----CKIKMVDDALNLFKQMHTENITPDVVTY 177
+I + + + +++IN L K K VD A +F + + DVVT+
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE--RDVVTW 443
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLP--PNVITYSSLLDALCK--NHHVDNAISLIK 233
+ +I G + G + A EL++EM PN T S L A + I
Sbjct: 444 TVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYA 503
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 293
Q +P ++ L+D K G + DA+ VF +++ K + T+T ++ G G
Sbjct: 504 LRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNMMAK----NEVTWTSLMTGYGMHG 558
Query: 294 LFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+EAL + +M G D VT +++YA G D+ + +M
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRM 605
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 150/319 (47%), Gaps = 22/319 (6%)
Query: 8 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK-SIN 66
S C+ ++DA ++ EM DVV++ ++I + +G+ K A+ + ++M +
Sbjct: 173 SRCRS--LSDARKVFDEMSVW----DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCR 226
Query: 67 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 126
PD T ++ G K + + ++ + L+D Y +++A +
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 127 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCK 186
F+ M+ DV S++ M+ G +I +DA+ LF++M E I DVVT+S+ I G +
Sbjct: 287 FSNMS----VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 187 SGRISDAWELVNEMHSRGLPPNVITYSSLLD------ALCKNHHVD-NAISLIKKMKHQG 239
G +A + +M S G+ PN +T S+L AL + AI ++ G
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNG 402
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ L+D K ++ A+ +F L K DV T+T+MI G + G ++AL
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKAL 460
Query: 300 ALMSKMEDNGCT--PDAVT 316
L+S+M + C P+A T
Sbjct: 461 ELLSEMFEEDCQTRPNAFT 479
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 12/295 (4%)
Query: 26 LAKRISPD---VVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKE 82
L +R P V + +LI + G + + L M S PD YTF + A +
Sbjct: 81 LLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI 140
Query: 83 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 142
V+ ++ A+ + G +V ++L+ Y ++ A +F+ M+ DV S+
Sbjct: 141 SSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS----VWDVVSW 196
Query: 143 SIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSLIDGLCKSGRISDAWELVNEMH 201
+ +I K+ AL +F +M E PD +T +++ G S +L
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 202 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
+ + N+ + L+D K +D A ++ M + DV ++ ++ G + GR +
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS----VKDVVSWNAMVAGYSQIGRFE 312
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
DA +F+ + + +DV T++ I+G + GL EAL + +M +G P+ VT
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 135/311 (43%), Gaps = 15/311 (4%)
Query: 38 TTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 97
+ LIS + VG L AV LL + + VY ++ L+ + G + + +M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRF--PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 98 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 157
PD T+ + ++ V E +V + ++ + + + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 158 ALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLL 216
A +F +M DVV+++S+I+ K G+ A E+ + M + G P+ IT ++L
Sbjct: 181 ARKVFDEMSVW----DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 217 D--ALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 274
A H + + ++ +++ L+D K G + +A VF ++ +K
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSE--MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK- 293
Query: 275 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAE 334
DV ++ M+ G + G F++A+ L KM++ D VT+ I Q G +A
Sbjct: 294 ---DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 335 KLLRQMIARGL 345
+ RQM++ G+
Sbjct: 351 GVCRQMLSSGI 361
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 132/315 (41%), Gaps = 61/315 (19%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK- 63
+ID K K V+ A ++ + K DVVT+T +I G+ G +A+ LL++M +
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKE--RDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 64 -SINPDVYTFSI------------------------------------LVDALCKEGKVK 86
P+ +T S L+D K G +
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
+A+ V M+ E VT++SLM GY + +A IF+ M R+ D + +++
Sbjct: 531 DARLVFDNMMAKNE----VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 147 NGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
M+D + F +M T ++P Y+ L+D L ++GR++ A L+ EM
Sbjct: 587 YACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME-- 644
Query: 206 PPNVITYSSLLDALCKNHHV----DNAISLIKKM--KHQGILPDVYTYTILLDGLCKGGR 259
PP V+ + L + C+ H + A I ++ H G +YT+L + GR
Sbjct: 645 PPPVVWVAFL--SCCRIHGKVELGEYAAEKITELASNHDG------SYTLLSNLYANAGR 696
Query: 260 LKDAQEVFQDLLIKG 274
KD + + KG
Sbjct: 697 WKDVTRIRSLMRHKG 711
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 140/318 (44%), Gaps = 23/318 (7%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+S I + L +A + +ML+ I P+ VT +++SG VG L + +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 62 VKSIN-------PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 114
I+ + + L+D K KV A+ + + ++ DVVT++ ++ GY
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL--SPKERDVVTWTVMIGGY 450
Query: 115 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT------E 168
+ NKA ++ + M + +++I + + AL + KQ+H +
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA--ALRIGKQIHAYALRNQQ 508
Query: 169 NITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 228
N P V+ + LID K G ISDA + + M ++ N +T++SL+ + + + A
Sbjct: 509 NAVPLFVS-NCLIDMYAKCGSISDARLVFDNMMAK----NEVTWTSLMTGYGMHGYGEEA 563
Query: 229 ISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMIN 287
+ + +M+ G D T ++L G + E F + + G + Y +++
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVD 623
Query: 288 GLCKDGLFDEALALMSKM 305
L + G + AL L+ +M
Sbjct: 624 LLGRAGRLNAALRLIEEM 641
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 156/338 (46%), Gaps = 8/338 (2%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S ++ + + + + + SEM + I ++V++ ++SGF G KEAV + ++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
PD T S ++ ++ + + + +IK G D S+++D Y V
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+FN ME A +Y I GL + +VD AL +F+ + + +VV+++S+I
Sbjct: 306 IISLFNQFEMME-AGVCNAY---ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G ++G+ +A EL EM G+ PN +T S+L A + + S +L
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
+V+ + L+D K GR+ +Q VF + K ++ + ++NG G E +++
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTK----NLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
+ PD +++ ++ A Q G D+ K + M
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 139/305 (45%), Gaps = 9/305 (2%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
I L ++ LV+ A ++ + + +VV++T++I+G G+ EA+ L +M V +
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 66 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 125
P+ T ++ A + ++ ++ +V S+L+D Y +N ++
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 126 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC 185
+FN M L ++ ++NG + +++F+ + + PD ++++SL+
Sbjct: 445 VFNMMPTKNLV----CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACG 500
Query: 186 KSGRISDAWELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDV 244
+ G + W+ M G+ P + YS +++ L + + A LIK+M + PD
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDS 557
Query: 245 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 304
+ LL+ C+ D E+ + L + TY ++ N G++ E ++ +K
Sbjct: 558 CVWGALLNS-CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNK 616
Query: 305 MEDNG 309
ME G
Sbjct: 617 MESLG 621
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 36/318 (11%)
Query: 60 MVVKSI-NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
+V++SI +P +Y+FS L+ AL K ++ V + M G PD +L ++
Sbjct: 71 LVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELS 130
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
+ I L D M + + + DA +F +M + DVVT S
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCS 186
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
+L+ + G + + +++EM S G+ N+++++ +L ++ + A+ + +K+ H
Sbjct: 187 ALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHL 246
Query: 239 GILPDVYTYTILLDGLCKG-----GRLKDAQEVFQDLL---------IKGYNLDVRTYTI 284
G PD T + +L + GRL + Q LL I Y Y I
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Query: 285 M-----------------INGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQE 327
+ I GL ++GL D+AL + ++ + V++ II Q
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366
Query: 328 GDNDKAEKLLRQMIARGL 345
G + +A +L R+M G+
Sbjct: 367 GKDIEALELFREMQVAGV 384
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 160/305 (52%), Gaps = 36/305 (11%)
Query: 6 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSI 65
I L + +++A L+ +K IS ++ ++++G+ ++A L ++M
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSIS----SWNSMVAGYFANLMPRDARKLFDEM----- 74
Query: 66 NPD--VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
PD + +++ LV K G++ EA+ V +M + +VV++++L+ GY +V+ A
Sbjct: 75 -PDRNIISWNGLVSGYMKNGEIDEARKVFDLM----PERNVVSWTALVKGYVHNGKVDVA 129
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDG 183
E +F M + S+++M+ G + +DDA L++ + + D + +S+I G
Sbjct: 130 ESLFWKMPE----KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHG 181
Query: 184 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPD 243
LCK GR+ +A E+ +EM R +VIT+++++ +N+ VD+A + M + +
Sbjct: 182 LCKEGRVDEAREIFDEMSER----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV-- 235
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
++T +L G + GR++DA+E+F+ + +K V MI+GL + G +A +
Sbjct: 236 --SWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEIAKARRVFD 289
Query: 304 KMEDN 308
M++
Sbjct: 290 SMKER 294
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 167/376 (44%), Gaps = 66/376 (17%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ + V+ A +L+ +M K + V++T ++ GF G++ +A L +
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIP 168
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K D + ++ LCKEG+V EA+ + M + V+T+++++ GY N V+
Sbjct: 169 DK----DNIARTSMIHGLCKEGRVDEAREIFDEM----SERSVITWTTMVTGYGQNNRVD 220
Query: 122 KAEDIFNTMT-RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
A IF+ M + E+ S++ M+ G + ++DA LF+ M + P V+ +++
Sbjct: 221 DARKIFDVMPEKTEV-----SWTSMLMGYVQNGRIEDAEELFEVM---PVKP-VIACNAM 271
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
I GL + G I+ A + + M R N ++ +++ +N A+ L M+ QG+
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKER----NDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 241 LP-----------------------------------DVYTYTILLDGLCKGGRLKDAQE 265
P DVY ++L+ K G L ++
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT-PDAVTYEIIIYAL 324
+F K D+ + +I+G GL +EAL + +M +G T P+ VT+ + A
Sbjct: 388 IFDRFPSK----DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC 443
Query: 325 FQEGDNDKAEKLLRQM 340
G ++ K+ M
Sbjct: 444 SYAGMVEEGLKIYESM 459
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 143 SIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHS 202
++ I L +I + +A LF +++I+ +++S++ G + DA +L +EM
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSIS----SWNSMVAGYFANLMPRDARKLFDEMPD 76
Query: 203 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKD 262
R N+I+++ L+ KN +D A + M + +V ++T L+ G G++
Sbjct: 77 R----NIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDV 128
Query: 263 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIY 322
A+ +F + K + ++T+M+ G +DG D+A L + D D + +I+
Sbjct: 129 AESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIH 180
Query: 323 ALFQEGDNDKAEKLLRQMIARGLL 346
L +EG D+A ++ +M R ++
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVI 204
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ T+I ++ +A +L+ M + + P T +++S + L + Q+V
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ DVY S+L+ K G++ ++K ++ D++ ++S++ GY
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSK----LIFDRFPSKDIIMWNSIISGYASHGLGE 414
Query: 122 KAEDIFNTMT-RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSS 179
+A +F M P+ ++ ++ MV++ L +++ M + + P Y+
Sbjct: 415 EALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYAC 474
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH-HVDNAISLIKKMKHQ 238
++D L ++GR ++A E+++ M + P+ + SLL A C+ H +D A KK+
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLGA-CRTHSQLDVAEFCAKKLIE- 529
Query: 239 GILPD-VYTYTILLDGLCKGGRLKDAQEV 266
I P+ TY +L + GR D E+
Sbjct: 530 -IEPENSGTYILLSNMYASQGRWADVAEL 557
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 128/257 (49%), Gaps = 21/257 (8%)
Query: 2 YSTIIDSLC--------KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV------ 47
+S I S+C K K A +Y ++L + P+ ++Y ++S F I+
Sbjct: 376 FSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASK 435
Query: 48 -GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 106
G + V LLN+M K + P ++ ++ A K + A + M+ GEKP V++
Sbjct: 436 RGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVIS 495
Query: 107 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM---INGLCKIKMVDDALNLFK 163
Y +L+ ++A ++N M ++ + P++ +Y+ M + G K ++D L K
Sbjct: 496 YGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLD---TLLK 552
Query: 164 QMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 223
+M ++ I P VVT++++I G ++G A+E + M S + PN ITY L++AL +
Sbjct: 553 EMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDA 612
Query: 224 HVDNAISLIKKMKHQGI 240
A L K +++G+
Sbjct: 613 KPRLAYELHVKAQNEGL 629
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%)
Query: 69 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 128
V F+IL+ A K G + +L M G KP +++++ +E A IF
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 129 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
M P V SY +++ L K K+ D+A ++ M I P++ Y+++ L
Sbjct: 483 AMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
+ + L+ EM S+G+ P+V+T+++++ +N A +MK + + P+ TY
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
+L++ L + + A E+ +G L + Y ++
Sbjct: 603 MLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%)
Query: 139 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN 198
V ++I+++ K + + L +M + + P +++++ K+ + A ++
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGG 258
M G P VI+Y +LL AL K D A + M GI P++Y YT + L
Sbjct: 483 AMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 259 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYE 318
+ + +++ KG V T+ +I+G ++GL A +M+ P+ +TYE
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 319 IIIYAL 324
++I AL
Sbjct: 603 MLIEAL 608
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 10/249 (4%)
Query: 83 GKVKEAKNVLAV---MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF-------NTMTR 132
GK K+ L + ++ G +P+ ++Y ++ + ++ I+ N M
Sbjct: 392 GKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMED 451
Query: 133 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
L P + ++ ++ K A+ +FK M P V++Y +L+ L K +
Sbjct: 452 KGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDE 511
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
A+ + N M G+ PN+ Y+++ L + +L+K+M +GI P V T+ ++
Sbjct: 512 AFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVIS 571
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
G + G A E F + + + TY ++I L D A L K ++ G
Sbjct: 572 GCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKL 631
Query: 313 DAVTYEIII 321
+ Y+ ++
Sbjct: 632 SSKPYDAVV 640
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 159/374 (42%), Gaps = 32/374 (8%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y++++ ++ + +A + +M + I P++VTY TL+ + G+ +A+G+L+
Sbjct: 189 IYNSLLGAM---RGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLT 245
Query: 61 VVKSI--NPDVYTFSILVDALCKEG----------KVKEAKNVLAVMIKGGEKPDVVTYS 108
K NP Y+ ++LV ++G + K AK + + + + V
Sbjct: 246 KEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLE 305
Query: 109 SLMDGYC-------LV---NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
+ + C LV N + + N M + P + + +I + +
Sbjct: 306 NFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVG 365
Query: 159 LNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY------ 212
L+K++ + + LI + K+ + A E+ ++ G PN ++Y
Sbjct: 366 KELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSH 425
Query: 213 -SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
+ LL A K + L+ KM+ +G+ P + +L K A ++F+ ++
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV 485
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
G V +Y +++ L K L+DEA + + M G P+ Y + L + +
Sbjct: 486 DNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFN 545
Query: 332 KAEKLLRQMIARGL 345
+ LL++M ++G+
Sbjct: 546 LLDTLLKEMASKGI 559
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 7/199 (3%)
Query: 149 LCKIKMVDDALNLFKQMHTENITPDVVTY-------SSLIDGLCKSGRISDAWELVNEMH 201
+ K K AL +++ + E P+ ++Y + L+ K G L+N+M
Sbjct: 391 MGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKME 450
Query: 202 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
+GL P ++++L A K AI + K M G P V +Y LL L KG
Sbjct: 451 DKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYD 510
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
+A V+ ++ G ++ YT M + L F+ L+ +M G P VT+ +I
Sbjct: 511 EAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVI 570
Query: 322 YALFQEGDNDKAEKLLRQM 340
+ G + A + +M
Sbjct: 571 SGCARNGLSGVAYEWFHRM 589
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 144/316 (45%), Gaps = 15/316 (4%)
Query: 31 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKN 90
SP+++ + +ISG+ G +EA+ + ++M+ K + PD + + + A + G +++A++
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 91 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN-TMTRMELAPDVQSYSIMINGL 149
+ + + + DV S+L+D + V A +F+ T+ R DV +S MI G
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR-----DVVVWSAMIVGY 399
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
+A++L++ M + P+ VT+ L+ SG + + W N M + P
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQ 459
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQD 269
Y+ ++D L + H+D A +IK M Q P V + LL CK R + E
Sbjct: 460 QHYACVIDLLGRAGHLDQAYEVIKCMPVQ---PGVTVWGALLSA-CKKHRHVELGEYAAQ 515
Query: 270 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA---LFQ 326
L + Y + N L+D + +M++ G D + + F+
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575
Query: 327 EGD--NDKAEKLLRQM 340
GD + + E++ RQ+
Sbjct: 576 VGDKSHPRYEEIERQV 591
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 162/363 (44%), Gaps = 47/363 (12%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ II ++ DA +YS M R+SPD T+ L+ + L+ + Q+
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 62 VKSINPDVY---------------------------------TFSILVDALCKEGKVKEA 88
+ DV+ +++ +V A + G+ EA
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 89 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM--ELAPDVQSYSIMI 146
+ + M K KPD V S+++ + + ++ + I ++ +M E+ PD+ I +
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL---ISL 263
Query: 147 NGL-CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 205
N + K V A LF +M +P+++ ++++I G K+G +A ++ +EM ++ +
Sbjct: 264 NTMYAKCGQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 206 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
P+ I+ +S + A + ++ A S+ + + DV+ + L+D K G ++ A+
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
VF L + DV ++ MI G G EA++L ME G P+ VT+ ++ A
Sbjct: 380 VFDRTL----DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN 435
Query: 326 QEG 328
G
Sbjct: 436 HSG 438
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 10/289 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++ +I K+ +A +++ EM+ K + PD ++ T+ IS VG L++A + +
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
DV+ S L+D K G V+ A+ V + DVV +S+++ GY L
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL----DRDVVVWSAMIVGYGLHGRA 405
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+A ++ M R + P+ ++ ++ MV + F +M I P Y+ +
Sbjct: 406 REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV 465
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
ID L ++G + A+E++ M + P V + +LL A K+ HV+ +++ I
Sbjct: 466 IDLLGRAGHLDQAYEVIKCM---PVQPGVTVWGALLSACKKHRHVELGEYAAQQLF--SI 520
Query: 241 LPDVYTYTILLDGLCKGGRLKD-AQEVFQDLLIKGYNLDVRTYTIMING 288
P + + L L RL D EV + KG N DV + + G
Sbjct: 521 DPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 147/309 (47%), Gaps = 12/309 (3%)
Query: 34 VVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLA 93
+V++T ++S + G+ EA+ + +QM + PD +++A +K+ +++ A
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 94 VMIKGGE--KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
++K G +PD++ SL Y +V A+ +F+ M +P++ ++ MI+G K
Sbjct: 247 SVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMK----SPNLILWNAMISGYAK 300
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
+A+++F +M +++ PD ++ +S I + G + A + + +V
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
S+L+D K V+ A + + + DV ++ ++ G GR ++A +++ +
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
G + + T+ ++ G+ E ++M D+ P Y +I L + G D
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLD 476
Query: 332 KAEKLLRQM 340
+A ++++ M
Sbjct: 477 QAYEVIKCM 485
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/334 (18%), Positives = 132/334 (39%), Gaps = 46/334 (13%)
Query: 37 YTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 96
Y +LI QLK+ + +++V + + + L+ A G + A+ V +
Sbjct: 24 YASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL- 79
Query: 97 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 156
+P + +++++ GY N A +++ M ++PD ++ ++ + +
Sbjct: 80 ---PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 157 DALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP---PNVITYS 213
+ Q+ DV + LI K R+ A + GLP +++++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE-----GLPLPERTIVSWT 191
Query: 214 SLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLC-----KGGR------LKD 262
+++ A +N A+ + +M+ + PD +L+ K GR +K
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 263 AQEVFQDLLI--------------------KGYNLDVRTYTIMINGLCKDGLFDEALALM 302
E+ DLLI K + ++ + MI+G K+G EA+ +
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
+M + PD ++ I A Q G ++A +
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 34/262 (12%)
Query: 27 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVK 86
A I PD LISG+CI +L EA L +M +++++D +CK + K
Sbjct: 238 ANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKK 297
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA--EDIFNTMTRMELAPDVQSYSI 144
D + L EV K E F + R + +++++
Sbjct: 298 -------------------------DPFKLQPEVEKVLLEMEFRGVPR-----NTETFNV 327
Query: 145 MINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+IN LCKI+ ++A+ LF +M PD TY LI L ++ RI + E++++M S G
Sbjct: 328 LINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAG 387
Query: 205 LPP--NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKD 262
N Y L LC +++A+S+ K MK G P + TY +L+ +C +L
Sbjct: 388 YGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTR 447
Query: 263 AQEVFQDLLIKGYNLDVRTYTI 284
A ++++ KG + + Y +
Sbjct: 448 ANGLYKEAAKKGIAVSPKEYRV 469
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%), Gaps = 11/285 (3%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 129
T +D L + G+ K+ + M G K D + + ++ C + AE +
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236
Query: 130 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGR 189
T E+ PD ++I+G C + +D+A L +M Y+ ++D +CK R
Sbjct: 237 -TANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 295
Query: 190 ISDAWELVNE-------MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
D ++L E M RG+P N T++ L++ LCK + A++L +M G P
Sbjct: 296 KKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQP 355
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN--LDVRTYTIMINGLCKDGLFDEALA 300
D TY +L+ L + R+ + E+ + GY L+ + Y + LC + A++
Sbjct: 356 DAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMS 415
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ M+ NGC P TY++++ + +A L ++ +G+
Sbjct: 416 VFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 123/297 (41%), Gaps = 17/297 (5%)
Query: 36 TYTTLISGFCIVGQLKEAVGLLNQMVVK-SINPDVYTFSILVDALCKEGKVKEAKNVLAV 94
T + I G+ K+ +M + D + +++V LC++G ++
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHA----SIAEK 232
Query: 95 MIKGGEK---PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
M+K PD L+ G+C+ ++++A + M+R ++Y++M++ +CK
Sbjct: 233 MVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCK 292
Query: 152 IKMVDDALNL-------FKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 204
+ D L +M + + T++ LI+ LCK R +A L M G
Sbjct: 293 LCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWG 352
Query: 205 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI--LPDVYTYTILLDGLCKGGRLKD 262
P+ TY L+ +L + + +I KMK G L + Y L LC RL+
Sbjct: 353 CQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEH 412
Query: 263 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEI 319
A VF+ + G ++TY +++ +C + A L + G Y +
Sbjct: 413 AMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I++LCK + +A L+ M PD TY LI ++ E ++++M
Sbjct: 325 FNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMK 384
Query: 62 VKSI-----NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
+ Y F + LC +++ A +V M G KP + TY LM C
Sbjct: 385 SAGYGELLNKKEYYGF---LKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCA 441
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSI 144
N++ +A ++ + +A + Y +
Sbjct: 442 NNQLTRANGLYKEAAKKGIAVSPKEYRV 469
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 171/356 (48%), Gaps = 59/356 (16%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ ++ +LC D DA L+ EM + +VV++ TL++G G +++A + + M
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMP 196
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ DV +++ ++ + ++EAK + M + +VVT++S++ GYC +V
Sbjct: 197 SR----DVVSWNAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVR 248
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH--TENITPDVVTYSS 179
+A +F M ++ S++ MI+G ++ +AL LF +M + ++P+ T S
Sbjct: 249 EAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 180 LI---DGLCKSGR----------ISDAWELVNE--------MHSRGLPPNVITYSSLLDA 218
L GL R IS+ WE V+ +H + + SLL+
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 219 -------------LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQE 265
KN ++ A +L +++K L D ++T ++DG + G + A
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
+FQ L ++ D T+T+MI+GL ++ LF EA +L+S M G P TY +++
Sbjct: 422 LFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 159/302 (52%), Gaps = 31/302 (10%)
Query: 48 GQLKEAVGLLNQMVVK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 106
G L A LL+++ + SIN VY S+L K G + EA+ + VM + ++VT
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLL-SKYAKTGYLDEARVLFEVM----PERNIVT 110
Query: 107 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 166
++++ GY +N+A +F M + +V S+++M+ LC +DA+ LF +M
Sbjct: 111 CNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 167 TENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 226
N VV++++L+ GL ++G + A ++ + M SR +V+++++++ +N ++
Sbjct: 166 ERN----VVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGME 217
Query: 227 NAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 286
A L M + +V T+T ++ G C+ G +++A +F ++ + ++ ++T MI
Sbjct: 218 EAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMI 269
Query: 287 NGLCKDGLFDEALALMSKMED--NGCTPDAVTYEIIIYALFQEGDNDK--AEKLLRQMIA 342
+G + L+ EAL L +M+ + +P+ T + YA G + E+L Q+I+
Sbjct: 270 SGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS 329
Query: 343 RG 344
G
Sbjct: 330 NG 331
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 17/273 (6%)
Query: 23 SEMLAKRISP--DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALC 80
+E L +R+ D V++T++I G+ G + A GL ++ K D T+++++ L
Sbjct: 387 AETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLV 442
Query: 81 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA--PD 138
+ EA ++L+ M++ G KP TYS L+ + +++ + I + + PD
Sbjct: 443 QNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPD 502
Query: 139 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVN 198
+ + +++ K ++DA +F +M + D V+++S+I GL G A L
Sbjct: 503 LILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFK 558
Query: 199 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPDVYTYTILLDGLCKG 257
EM G PN +T+ +L A + + + L K MK I P + Y ++D L +
Sbjct: 559 EMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRA 618
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
G+LK+A+E L + D Y ++ GLC
Sbjct: 619 GKLKEAEEFISAL---PFTPDHTVYGALL-GLC 647
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 175/383 (45%), Gaps = 65/383 (16%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+++++ C+ V +AY L+ EM + ++V++T +ISGF +EA+ L +M
Sbjct: 234 WTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 62 --VKSINPDVYTFSILVDALCKEGK--VKEAKNVLAVMIKGGEKP---DVVTYSSLMDGY 114
V +++P+ T L A G + + + A +I G + D SL+ Y
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 115 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
+ A+ + N + D+QS +I+IN K ++ A LF+++ + + D
Sbjct: 350 ASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNGDLERAETLFERVKSLH---DK 400
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
V+++S+IDG ++G +S A+ L ++H + + +T++ ++ L +N A SL+
Sbjct: 401 VSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSD 456
Query: 235 MKHQGILPDVYTYTILLDG-------------------------------------LCKG 257
M G+ P TY++LL K
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 258 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTY 317
G ++DA E+F ++ K D ++ MI GL GL D+AL L +M D+G P++VT+
Sbjct: 517 GAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
Query: 318 EIIIYALFQEGDNDKAEKLLRQM 340
++ A G + +L + M
Sbjct: 573 LGVLSACSHSGLITRGLELFKAM 595
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 107/205 (52%), Gaps = 21/205 (10%)
Query: 142 YSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMH 201
++ +++ K +D+A LF+ M NI VT ++++ G K R+++AW L EM
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPERNI----VTCNAMLTGYVKCRRMNEAWTLFREM- 134
Query: 202 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLK 261
P NV++++ +L ALC + ++A+ L +M + +V ++ L+ GL + G ++
Sbjct: 135 ----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDME 186
Query: 262 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIII 321
A++VF + + DV ++ MI G ++ +EA L M + + VT+ ++
Sbjct: 187 KAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMV 238
Query: 322 YALFQEGDNDKAEKLLRQMIARGLL 346
Y + GD +A +L +M R ++
Sbjct: 239 YGYCRYGDVREAYRLFCEMPERNIV 263
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 16/332 (4%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
V DA ++ EM + IS VV +I G +E++ +M + D +
Sbjct: 67 VLDARKVFDEMPKRDISGCVV----MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPS 122
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L+ A + K + +++K + D SSL+D Y EV A +F+ +
Sbjct: 123 LLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ- 181
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
D+ ++ MI+G D+ALNL K M I PDV+T+++LI G
Sbjct: 182 ---DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVS 238
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
E++ M G P+V++++S++ L N + A K+M G+ P+ T LL
Sbjct: 239 EILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 255 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPD- 313
+K +E+ ++ G + +++ K G EA+ L K TP
Sbjct: 299 TTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRK------TPKK 352
Query: 314 -AVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
VT+ +I+ G DKA +L QM A G
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATG 384
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 137/285 (48%), Gaps = 19/285 (6%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+++ +I + ++A NL +M I PDV+T+ LISGF + ++ +L M
Sbjct: 185 VFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PDV +++ ++ L + ++A + M+ G P+ T +L+ + +
Sbjct: 245 CLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYM 304
Query: 121 NKAEDI--FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPD--VVT 176
++I ++ +T +E V+S + + G C + +A+ LF++ TP VT
Sbjct: 305 KHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGF--ISEAMILFRK------TPKKTTVT 356
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
++S+I G A EL ++M + G + +T++++L A D +L M+
Sbjct: 357 FNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Query: 237 HQ-GILPDVYTYTILLDGLCKGGRLKDAQEVFQ------DLLIKG 274
++ I+P + Y ++D L + G+L +A E+ + DL + G
Sbjct: 417 NKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWG 461
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 9/309 (2%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
D ++LI + G++ A + + + D+ F+ ++ + EA N++
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLG----EQDLVVFNAMISGYANNSQADEALNLV 206
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
M G KPDV+T+++L+ G+ + K +I M PDV S++ +I+GL
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
+ A + FKQM T + P+ T +L+ + E+ GL +
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR 326
Query: 213 SSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLI 272
S+LLD K + A+ L +K + + T+ ++ G A E+F +
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTPKKTTV----TFNSMIFCYANHGLADKAVELFDQMEA 382
Query: 273 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN-GCTPDAVTYEIIIYALFQEGDND 331
G LD T+T ++ GL D L M++ P Y ++ L + G
Sbjct: 383 TGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLV 442
Query: 332 KAEKLLRQM 340
+A ++++ M
Sbjct: 443 EAYEMIKAM 451
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 107/225 (47%), Gaps = 13/225 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+++II L + A++ + +ML + P+ T TL+ + +K + V
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV 315
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE-- 119
V + + S L+D K G + EA ++ + K VT++S++ +C N
Sbjct: 316 VTGLEDHGFVRSALLDMYGKCGFISEA----MILFRKTPKKTTVTFNSMI--FCYANHGL 369
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYS 178
+KA ++F+ M D +++ ++ + D NLF M + I P + Y+
Sbjct: 370 ADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA 429
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 223
++D L ++G++ +A+E++ M + P++ + +LL A C+NH
Sbjct: 430 CMVDLLGRAGKLVEAYEMIKAMR---MEPDLFVWGALLAA-CRNH 470
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 16/242 (6%)
Query: 108 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 167
+ L+ Y +V A +F+ M + D+ +MI + ++L+ F++M+
Sbjct: 55 AKLVTFYVECGKVLDARKVFDEMPK----RDISGCVVMIGACARNGYYQESLDFFREMYK 110
Query: 168 ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP----PNVITYSSLLDALCKNH 223
+ + D SL+ K+ R E +H L + SSL+D K
Sbjct: 111 DGLKLDAFIVPSLL----KASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG 166
Query: 224 HVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 283
V NA + + Q D+ + ++ G + +A + +D+ + G DV T+
Sbjct: 167 EVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWN 222
Query: 284 IMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+I+G ++ ++ M +G PD V++ II L N+KA +QM+
Sbjct: 223 ALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTH 282
Query: 344 GL 345
GL
Sbjct: 283 GL 284
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 154/327 (47%), Gaps = 18/327 (5%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+N A N++ EM + DVVT+ T+I +C G + EA L +M ++ PD
Sbjct: 162 INYARNVFDEMSHR----DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCN 217
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
+V A + G ++ + + +I+ + D ++L+ Y ++ A + F M+
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
L + M++G K +DDA +F Q + D+V ++++I +S +A
Sbjct: 278 LFVS----TAMVSGYSKCGRLDDAQVIFDQTEKK----DLVCWTTMISAYVESDYPQEAL 329
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH-QGILPDVYTYTILLDG 253
+ EM G+ P+V++ S++ A C N + + + H G+ ++ L++
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISA-CANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 254 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPD 313
K G L ++VF+ + + +V +++ MIN L G +AL+L ++M+ P+
Sbjct: 389 YAKCGGLDATRDVFEKMPRR----NVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 314 AVTYEIIIYALFQEGDNDKAEKLLRQM 340
VT+ ++Y G ++ +K+ M
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASM 471
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++T+I + + +A ++ EM I PDVV+ ++IS +G L +A + + +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
V + ++ + L++ K G + ++V M + +VV++SS+++ + E +
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKM----PRRNVVSWSSMINALSMHGEAS 427
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVTYSSL 180
A +F M + + P+ ++ ++ G +V++ +F M E NITP + Y +
Sbjct: 428 DALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 223
+D ++ + +A E++ M + NV+ + SL+ A C+ H
Sbjct: 488 VDLFGRANLLREALEVIESM---PVASNVVIWGSLMSA-CRIH 526
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 125/315 (39%), Gaps = 49/315 (15%)
Query: 68 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 127
D ++F ++ A+ K + E + V K D + MD Y +N A ++F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 128 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKS 187
+ M+ DV +++ MI C+ +VD+A LF++M N+ PD + +++ ++
Sbjct: 170 DEMSHR----DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRT 225
Query: 188 GRISDAWELVNEMHSRGLPPNVITY-----SSLLDALCKNHHVDNAISLIKKMKHQGILP 242
G N ++R + +I + LL AL + + + ++ + +
Sbjct: 226 G---------NMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 243 DVYTYTILLDGLCKGGRLKDAQ-------------------------------EVFQDLL 271
+++ T ++ G K GRL DAQ VF+++
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDND 331
G DV + +I+ G+ D+A + S + NG + +I + G D
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 332 KAEKLLRQMIARGLL 346
+ +M R ++
Sbjct: 397 ATRDVFEKMPRRNVV 411
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 145/302 (48%), Gaps = 17/302 (5%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNV 91
PD + +I GF + + ++ L +M+ S + YTF L+ A +E +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 92 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 151
A + K G + DV +SL++ Y + A +F+ + PD S++ +I G K
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVK 193
Query: 152 IKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 211
+D AL LF++M +N ++++++I G ++ +A +L +EM + + P+ ++
Sbjct: 194 AGKMDIALTLFRKMAEKN----AISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
++ L A + ++ + + I D +L+D K G +++A EVF+++
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA-----LFQ 326
K V+ +T +I+G G EA++ +M+ G P+ +T+ ++ A L +
Sbjct: 310 KKS----VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 327 EG 328
EG
Sbjct: 366 EG 367
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 141/309 (45%), Gaps = 13/309 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++++I K ++ A L+ +M K + +++TT+ISG+ KEA+ L ++M
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD + + + A + G +++ K + + + K + D V L+D Y E+
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++F + + VQ+++ +I+G +A++ F +M I P+V+T+++++
Sbjct: 300 EALEVFKNIKK----KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 182 DGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+G + + + M L P + Y ++D L + +D A I++M +
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP---L 412
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ + LL C+ + + E ++LI Y N D +D+A
Sbjct: 413 KPNAVIWGALLKA-CRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAE 471
Query: 301 LMSKMEDNG 309
M++ G
Sbjct: 472 TRRLMKEQG 480
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 145/290 (50%), Gaps = 20/290 (6%)
Query: 30 ISPDVVTYTTLISGFCIVGQL--KEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKE 87
+S D+ LI + G L ++A+ L +M + D +++ ++ L K G++++
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRD 203
Query: 88 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
A+ + M + D++++++++DGY E++KA ++F M + S+S M+
Sbjct: 204 ARRLFDEM----PQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVM 255
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
G K ++ A +F +M +VVT++ +I G + G + +A LV++M + GL
Sbjct: 256 GYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
+ S+L A ++ + + + +K + + Y LLD K G LK A +VF
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTY 317
D+ K D+ ++ M++GL G EA+ L S+M G PD VT+
Sbjct: 374 NDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 153/316 (48%), Gaps = 20/316 (6%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+N L+++++ + + D+ LIS + Q AV + NQ+ P+V+ +
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ----EPNVHLCNS 87
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
L+ A + + +A V + M + G D TY L+ + + + + N + ++
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 135 LAPDVQSYSIMIN--GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD 192
L+ D+ + +I+ C V DA+ LF++M D V+++S++ GL K+G + D
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRD 203
Query: 193 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLD 252
A L +EM R L I+++++LD + + A L +KM + + +++ ++
Sbjct: 204 ARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVM 255
Query: 253 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 312
G K G ++ A+ +F + + N V T+TI+I G + GL EA L+ +M +G
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKN--VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 313 DAVTYEIIIYALFQEG 328
DA I+ A + G
Sbjct: 314 DAAAVISILAACTESG 329
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 9/278 (3%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
+VVT+T +I+G+ G LKEA L++QMV + D ++ A + G + +
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
+++ + + ++L+D Y + KA D+FN + + +L S++ M++GL
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SWNTMLHGLGVH 394
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHS-RGLPPNVIT 211
+A+ LF +M E I PD VT+ +++ +G I + + M L P V
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH 454
Query: 212 YSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLL 271
Y L+D L + + AI +++ M + P+V + LL G C+ D + D L
Sbjct: 455 YGCLVDLLGRVGRLKEAIKVVQTMPME---PNVVIWGALL-GACRMHNEVDIAKEVLDNL 510
Query: 272 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+K D Y+++ N ++ + SKM+ G
Sbjct: 511 VKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 548
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 142/306 (46%), Gaps = 32/306 (10%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDAL--CKEGKVKEAKNVLAVMIKGGEKPDVV 105
L + L Q++ ++++ D++ L+ AL C++ N+ + ++P+V
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQ------TNLAVRVFNQVQEPNVH 83
Query: 106 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 165
+SL+ + ++ +A +F+ M R L D +Y ++ L + K M
Sbjct: 84 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG----QSWLPVVKMM 139
Query: 166 HTE----NITPDVVTYSSLIDGLCKSGR--ISDAWELVNEMHSRGLPPNVITYSSLLDAL 219
H ++ D+ ++LID + G + DA +L +M R + ++++S+L L
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGL 195
Query: 220 CKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 279
K + +A L +M + D+ ++ +LDG + + A E+F+ + + +
Sbjct: 196 VKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----NT 247
Query: 280 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQ 339
+++ M+ G K G + A + KM + VT+ III ++G +A++L+ Q
Sbjct: 248 VSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 340 MIARGL 345
M+A GL
Sbjct: 306 MVASGL 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM- 60
++T++ L +A L+S M + I PD VT+ ++ G + E + M
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME 443
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V + P V + LVD L + G++KEA V+ M +P+VV + +L+ + NEV
Sbjct: 444 KVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPM---EPNVVIWGALLGACRMHNEV 500
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMIN 147
+ A+++ + + +++ D +YS++ N
Sbjct: 501 DIAKEVLDNLVKLDPC-DPGNYSLLSN 526
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 154/303 (50%), Gaps = 9/303 (2%)
Query: 48 GQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 107
G+ E V + M + D T ++ + L + +++ A++ ++M++ G DVVT
Sbjct: 153 GKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESG--IDVVTV 210
Query: 108 SSL---MDGYCLVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNL-F 162
SL + C E+ +A ++ M ++ + ++ ++ MI G C + + L+L
Sbjct: 211 YSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVL 269
Query: 163 KQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 222
K M E++ D+ +Y LIDG G++ +A LV MH + L Y+ +++ +
Sbjct: 270 KLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRF 329
Query: 223 HHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
V+ I L +M +G+ P+ TY +L++GLCK G++ +A +L + + +D Y
Sbjct: 330 GLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMY 389
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
+ + + G+ D++L ++++M +G P A E + +LF E + +A+ L+ ++
Sbjct: 390 STLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLF-EVNRKEAQMLITIVVK 448
Query: 343 RGL 345
G+
Sbjct: 449 CGI 451
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 128/251 (50%), Gaps = 7/251 (2%)
Query: 18 AYNLYSEMLAKRISPDVVT---YTTLISGFCIVGQLKEAVGLLNQM-VVKSINPDVYTFS 73
A + +S M+ I DVVT T +++ C G++ A L+ +M +VK + ++ TF
Sbjct: 193 ARDFFSLMVESGI--DVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFK 250
Query: 74 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 133
++ K +E VL +M K D+ +Y L+DG+ +V +AE + M
Sbjct: 251 SMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDK 310
Query: 134 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDA 193
+L + Y++++NG + +V+ + L+ +M + +TP+ TY L++GLCK+G++ +A
Sbjct: 311 KLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEA 370
Query: 194 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDG 253
+NE+ + YS+L + + +D ++ ++ +M G +P L D
Sbjct: 371 MSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADS 430
Query: 254 LCKGGRLKDAQ 264
L + R K+AQ
Sbjct: 431 LFEVNR-KEAQ 440
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 122/261 (46%), Gaps = 41/261 (15%)
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL---I 181
++F M E+ D ++ ++ + L + ++ A + F M I DVVT SL +
Sbjct: 160 EVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGI--DVVTVYSLTVVV 217
Query: 182 DGLCKSGRISDAWELVNEMH-SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
LC +G I+ A ELV EM +G+ N++T+ S++ K + ++K M+ + +
Sbjct: 218 TVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESV 277
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQ-----------------------------------E 265
+ D+ +Y +L+DG G++++A+ E
Sbjct: 278 MLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIE 337
Query: 266 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALF 325
++ ++ +G + TY +++NGLCK G EA++ ++++ N D Y + +
Sbjct: 338 LYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECY 397
Query: 326 QEGDNDKAEKLLRQMIARGLL 346
+ G DK+ +++ +MI G +
Sbjct: 398 RVGMIDKSLEVVAEMIRDGFI 418
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ I++ + LV LYSEM ++ ++P+ TY L++G C G++ EA+ LN++
Sbjct: 318 LYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
V D +S L + + G + ++ V+A MI+ G P L D + EV
Sbjct: 378 RVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADS---LFEV 434
Query: 121 NKAE 124
N+ E
Sbjct: 435 NRKE 438
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y +ID V +A L M K++ + Y +++G+ G +++ + L ++M
Sbjct: 284 YKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMS 343
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ + P+ T+ +L++ LCK GKV EA + L + + D YS+L + V ++
Sbjct: 344 SRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMID 403
Query: 122 KAEDIFNTMTRMELAP 137
K+ ++ M R P
Sbjct: 404 KSLEVVAEMIRDGFIP 419
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 157/347 (45%), Gaps = 42/347 (12%)
Query: 18 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVD 77
A+ ++ M + SP + +LISG+ +GQ ++A+ L QM + PD +TF ++
Sbjct: 146 AHEVFDRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 78 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 137
A G V+ + + ++K G DV ++L+ Y ++ KA ++F+ +
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH----K 259
Query: 138 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLC--KSGRISDAWE 195
D S++ M+ G ++ +AL++F+ M I PD V SS++ + K GR W
Sbjct: 260 DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWV 319
Query: 196 LVNEMH--------------SRG------------LPPNVITYSSLLDALCKNHHVDNAI 229
+ M RG L + +++++++ A KN N +
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGL 376
Query: 230 SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD--VRTYTIMIN 287
++M PD T+ +L G ++D + +F L+ K Y +D + Y M+N
Sbjct: 377 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLF-SLMSKEYGIDPKMEHYACMVN 435
Query: 288 GLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAE 334
+ G+ +EA +++ +++ G + ++YA + G+ D E
Sbjct: 436 LYGRAGMMEEAYSMI--VQEMGLEAGPTVWGALLYACYLHGNTDIGE 480
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 32/295 (10%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y I L K+ + ++ +++L+ R + Y ++I F G+L AV + MV
Sbjct: 175 YHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMV 234
Query: 62 VK---SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 118
P + T+ IL AL G +V ++
Sbjct: 235 TSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRS-------------------- 274
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-ENITPDVVTY 177
+F M + PDV + + ++ G V+DAL +F QM + P+ TY
Sbjct: 275 -------LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTY 327
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
LI GLC GR +A EL++EM +G PN +Y+SL++A + +D+A+ + +M
Sbjct: 328 DYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
G + D +Y L+D C+ G+ +A + + L K +D +Y ++N L KD
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL-VDRDSYDKLVNVLHKD 441
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN---ITPDVVTYSSL 180
+DI N + + + Y+ +I K + A+N+F+ M T P + TY L
Sbjct: 192 DDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHIL 251
Query: 181 IDGLCKSGRIS--------DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
L G S L +M G+ P+V + L+ + HV++A+ +
Sbjct: 252 FKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIF 311
Query: 233 KKMKH-QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 291
+M P+ +TY L+ GLC GR +A+E+ ++ KG+ + ++Y ++N
Sbjct: 312 HQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFAL 371
Query: 292 DGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
G D+A+ + +M +NG D ++Y ++ ++G D+A +LL + + L+
Sbjct: 372 SGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV 426
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 141 SYSIMINGLCKIKM---VDDALNLF---KQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
SY I I L KM +DD +N + + EN+ Y+S+I K+G++ A
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENL------YNSIIFYFTKAGKLIRAV 227
Query: 195 ELVNEM-HSRGLP--PNVITYSSLLDALCK-------NH-HVDNAISLIKKMKHQGILPD 243
+ M S+ L P + TY L AL NH +++ SL ++M GI PD
Sbjct: 228 NIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPD 287
Query: 244 VYTYTILLDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEALALM 302
V+ L+ G + DA +F + ++ + TY +I+GLC G A L+
Sbjct: 288 VFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELL 347
Query: 303 SKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
S+M+ G P+ +Y ++ A G+ D A K L +MI G
Sbjct: 348 SEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 160/352 (45%), Gaps = 21/352 (5%)
Query: 1 MYSTIIDSLCKDK---LVNDAYNLYSEMLAKR---ISPDVVTYTTLISGFCIVGQLKEAV 54
+Y+T+I S+ + + A++LY ++L+ R + P+ TY +L Q
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 55 GLLNQMVVKSINP---DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 111
L+ V+K + P D + + LV GK++EA+++ + +PD+ T+++L+
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERI----REPDLATWNTLL 188
Query: 112 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 171
Y E++ E++ RM++ P+ S +I + + + N+T
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 172 PDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 231
+ +SLID K G +S A ++ +EM R +V Y++++ L + I L
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR----DVSCYNAMIRGLAVHGFGQEGIEL 304
Query: 232 IKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMINGLC 290
K + QG++PD T+ + + G + + ++F + + G V Y +++ L
Sbjct: 305 YKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLG 364
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIA 342
+ G +EA + KM P+A + + + GD ++ E L+ ++
Sbjct: 365 RSGRLEEAEECIKKMP---VKPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 152/331 (45%), Gaps = 14/331 (4%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y +I L K K A+ L+ EM+ + + YT L+S + G+ A LL +M
Sbjct: 152 IYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERM 211
Query: 61 -VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+ PDV+T+SIL+ + + + +++L+ M + G +P+ +TY++L+D Y
Sbjct: 212 KSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKM 271
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMIN-------GLCKIKMVDDALNLFKQMHTENITP 172
+ E +T+ +M D + S +N G +I+M++ N +++ + I P
Sbjct: 272 FVEME---STLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME---NCYEKFQSSGIEP 325
Query: 173 DVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
++ T++ L+D KSG ++ M ++TY+ ++DA + + L
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 233 KKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 292
+ M+ + I P T L+ + + V + + LD+ + +++ +
Sbjct: 386 RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRM 445
Query: 293 GLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
F E ++ ME G PD +TY ++ A
Sbjct: 446 EKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 101 KPDVVTYSSL--MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 158
KP+V Y L M G C + KA ++F M + + Y+ +++ + D A
Sbjct: 147 KPNVGIYVKLIVMLGKC--KQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAA 204
Query: 159 LNLFKQMHT-ENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 217
L ++M + N PDV TYS LI + +L+++M +G+ PN ITY++L+D
Sbjct: 205 FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLID 264
Query: 218 ALCKNH-HVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 276
A K V+ +LI+ + PD +T L G+++ + ++ G
Sbjct: 265 AYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIE 324
Query: 277 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKL 336
++RT+ I+++ K G + + A+M M+ + VTY ++I A + GD + E L
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYL 384
Query: 337 LRQM 340
R M
Sbjct: 385 FRLM 388
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 10/288 (3%)
Query: 56 LLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 115
LL + + N +Y I++ CK+ + +A + MI G + Y++L+ Y
Sbjct: 139 LLREQLWYKPNVGIYVKLIVMLGKCKQPE--KAHELFQEMINEGCVVNHEVYTALVSAYS 196
Query: 116 LVNEVNKAEDIFNTMTRMELA----PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 171
+ A F + RM+ + PDV +YSI+I ++ D +L M + I
Sbjct: 197 RSGRFDAA---FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIR 253
Query: 172 PDVVTYSSLIDGLCKSGRISDAWE-LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 230
P+ +TY++LID K+ + L+ + P+ T +S L A N ++ +
Sbjct: 254 PNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMEN 313
Query: 231 LIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 290
+K + GI P++ T+ ILLD K G K V + + Y+ + TY ++I+
Sbjct: 314 CYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFG 373
Query: 291 KDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLR 338
+ G + L M+ P VT ++ A + DK +LR
Sbjct: 374 RAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 139/313 (44%), Gaps = 6/313 (1%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 59
+Y+ ++ + + + A+ L M + PDV TY+ LI F V + LL+
Sbjct: 187 VYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSD 246
Query: 60 MVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE---KPDVVTYSSLMDGYCL 116
M + I P+ T++ L+DA K E ++ L M+ GE KPD T +S + +
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQML--GEDDCKPDSWTMNSTLRAFGG 304
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
++ E+ + + P++++++I+++ K + + M + + +VT
Sbjct: 305 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 364
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y+ +ID ++G + L M S + P+ +T SL+ A + D +++ ++
Sbjct: 365 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIE 424
Query: 237 HQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 296
+ I D+ + L+D + + + + V + + KG+ D TY M+ G+
Sbjct: 425 NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTT 484
Query: 297 EALALMSKMEDNG 309
L +E G
Sbjct: 485 HVKELHGVVESVG 497
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 226 DNAISLIKKMKHQ-GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 284
++AI + + ++ Q P+V Y L+ L K + + A E+FQ+++ +G ++ YT
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 285 MINGLCKDGLFDEALALMSKMED-NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
+++ + G FD A L+ +M+ + C PD TY I+I + Q DK + LL M +
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 344 GL 345
G+
Sbjct: 251 GI 252
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 160/340 (47%), Gaps = 16/340 (4%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
++ +I K K + +A + M K VV++ ++SG+ G ++A+ L N M+
Sbjct: 201 WTVMITGFAKVKDLENARKYFDRMPEK----SVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ P+ T+ I++ A ++++ ++ + + + ++L+D + ++
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
A IFN + ++ +++ MI+G +I + A LF M N VV+++SLI
Sbjct: 317 SARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTMPKRN----VVSWNSLI 369
Query: 182 DGLCKSGRISDAWELVNEMHSRG-LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
G +G+ + A E +M G P+ +T S+L A ++ ++ ++ I
Sbjct: 370 AGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQI 429
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
+ Y L+ +GG L +A+ VF ++ + DV +Y + +G E L
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLN 485
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L+SKM+D G PD VTY ++ A + G + +++ + +
Sbjct: 486 LLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 151/345 (43%), Gaps = 30/345 (8%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+++ K + ND LY + I PD ++ +I G+ G+L Q +V
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS---AGRF----GILFQALV 127
Query: 63 KSIN--PDVYTFSILVDALCKEGKVKEAKNVL-AVMIKGGEKPDVVTYSSLMDGYCLVNE 119
+ + D Y ++++D K V+ A+ V + + G +V ++ GY
Sbjct: 128 EKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV-----MISGYWKWGN 182
Query: 120 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
+A +F+ M DV S+++MI G K+K +++A F +M ++ VV++++
Sbjct: 183 KEEACKLFDMMPE----NDVVSWTVMITGFAKVKDLENARKYFDRMPEKS----VVSWNA 234
Query: 180 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 239
++ G ++G DA L N+M G+ PN T+ ++ A SL+K + +
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 240 ILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 299
+ + + T LLD K ++ A+ +F +L G ++ T+ MI+G + G A
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSAR 351
Query: 300 ALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARG 344
L M + V++ +I G A + MI G
Sbjct: 352 QLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 163/381 (42%), Gaps = 67/381 (17%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKS 64
I+D K + V A ++ + +++R D + +ISG+ G +EA L + M
Sbjct: 142 IMDMYVKHESVESARKVFDQ-ISQRKGSD---WNVMISGYWKWGNKEEACKLFDMMP--- 194
Query: 65 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 124
DV ++++++ KVK+ +N + EK VV++++++ GY A
Sbjct: 195 -ENDVVSWTVMITGF---AKVKDLENARKYFDRMPEK-SVVSWNAMLSGYAQNGFTEDAL 249
Query: 125 DIFNTMTRMELAPDVQSYSIMINGLCK-----------IKMVDD---------------- 157
+FN M R+ + P+ ++ I+I+ C +K++D+
Sbjct: 250 RLFNDMLRLGVRPNETTWVIVISA-CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 158 ---------ALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 208
A +F ++ T+ ++VT++++I G + G +S A +L + M R N
Sbjct: 309 HAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTMPKR----N 361
Query: 209 VITYSSLLDALCKNHHVDNAISLIKKMKHQG-ILPDVYTYTILLDGLCKGGRLKDAQ--E 265
V++++SL+ N AI + M G PD T ++ L G + D + +
Sbjct: 362 VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT---MISVLSACGHMADLELGD 418
Query: 266 VFQDLLIKGY-NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYAL 324
D + K L+ Y +I + G EA + +M++ D V+Y + A
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAF 474
Query: 325 FQEGDNDKAEKLLRQMIARGL 345
GD + LL +M G+
Sbjct: 475 AANGDGVETLNLLSKMKDEGI 495
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 22/317 (6%)
Query: 32 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKV-----K 86
P + Y +ISG+ G +KE + L+ +M D YT S+++ A G
Sbjct: 98 PTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRS 157
Query: 87 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 146
+ V A +IK + D V ++L+D Y ++ A +F TM +V + MI
Sbjct: 158 LCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD----ENVVCCTSMI 213
Query: 147 NGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISD-AWELVNEMHSRGL 205
+G V+DA +F + D+V Y+++++G +SG + + ++ M G
Sbjct: 214 SGYMNQGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 206 PPNVITYSSLLDA--LCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDA 263
PN+ T++S++ A + +H V + ++ G+ + + LLD K G + DA
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVH--AQIMKSGVYTHIKMGSSLLDMYAKCGGINDA 327
Query: 264 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYA 323
+ VF + K +V ++T MI+G K+G +EAL L ++M++ P+ VT+ + A
Sbjct: 328 RRVFDQMQEK----NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Query: 324 LFQEGDNDKAEKLLRQM 340
G DK ++ M
Sbjct: 384 CSHSGLVDKGYEIFESM 400
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 126/265 (47%), Gaps = 14/265 (5%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
+ ++D+ K + A ++ M + +VV T++ISG+ G +++A + N V
Sbjct: 179 TALVDTYVKSGKLESARTVFETMKDE----NVVCCTSMISGYMNQGFVEDAEEIFNTTKV 234
Query: 63 KSINPDVYTFSILVDALCKEGK-VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
K D+ ++ +V+ + G+ K + ++ M + G P++ T++S++ ++
Sbjct: 235 K----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+ + + + + ++ S +++ K ++DA +F QM +N V +++S+I
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKN----VFSWTSMI 346
Query: 182 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GI 240
DG K+G +A EL M + PN +T+ L A + VD + + M+ +
Sbjct: 347 DGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSM 406
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQE 265
P + Y ++D + + G L A E
Sbjct: 407 KPKMEHYACIVDLMGRAGDLNKAFE 431
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 4/276 (1%)
Query: 32 PDVVTYTTLISGFCIVGQ---LKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEA 88
PD + + + + G+ L ++ + I V + + L+ A KEA
Sbjct: 106 PDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEA 165
Query: 89 KNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 147
V M K G +PD+ TY+ ++ C + + I M R + P S+ +MI+
Sbjct: 166 NRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMID 225
Query: 148 GLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 207
G K + D+ + + M + V TY+ +I LCK + ++A L++ + S + P
Sbjct: 226 GFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRP 285
Query: 208 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVF 267
N +TYS L+ C ++D A++L + M G PD Y L+ LCKGG + A +
Sbjct: 286 NSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILC 345
Query: 268 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 303
++ + K + ++NGL DEA L++
Sbjct: 346 RESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA 381
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%)
Query: 30 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAK 89
I PD+ TY +I C G + ++ +M K I P +F +++D KE K E +
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 90 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 149
V+ +M + G V TY+ ++ C + +A+ + + + + P+ +YS++I+G
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 150 CKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 209
C + +D+A+NLF+ M PD Y +LI LCK G A L E + P+
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 210 ITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
L++ L VD A LI +K +
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 104 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLF 162
V + ++L+ + + +A ++ M +M + PD+++Y+ MI LC+ + ++
Sbjct: 146 VKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIV 205
Query: 163 KQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 222
+M + I P ++ +IDG K + + +++ M G+ V TY+ ++ LCK
Sbjct: 206 AEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKR 265
Query: 223 HHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 282
A +LI + + P+ TY++L+ G C L +A +F+ ++ GY D Y
Sbjct: 266 KKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECY 325
Query: 283 TIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
+I+ LCK G F+ AL L + + P + ++ L D+A++L+
Sbjct: 326 FTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 6/289 (2%)
Query: 64 SINPDVYT----FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS-SLMDGYCLVN 118
S++PD + FS+ V L +E +L I+ P +++ + Y N
Sbjct: 66 SLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRAN 125
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPDVVTY 177
++++ F + + E+ V+S + ++ K +A ++ +M I PD+ TY
Sbjct: 126 MLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETY 185
Query: 178 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 237
+ +I LC+SG S ++ +V EM + + P ++ ++D K D +++ M
Sbjct: 186 NRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDE 245
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 297
G+ V TY I++ LCK + +A+ + ++ + TY+++I+G C + DE
Sbjct: 246 FGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDE 305
Query: 298 ALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQMIARGLL 346
A+ L M NG PD+ Y +I+ L + GD + A L R+ + + +
Sbjct: 306 AMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWV 354
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 100/196 (51%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +I LC+ + +Y++ +EM K I P ++ +I GF + E ++ M
Sbjct: 185 YNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMD 244
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
++ V T++I++ LCK K EAK ++ ++ +P+ VTYS L+ G+C ++
Sbjct: 245 EFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLD 304
Query: 122 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLI 181
+A ++F M PD + Y +I+ LCK + AL L ++ +N P L+
Sbjct: 305 EAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLV 364
Query: 182 DGLCKSGRISDAWELV 197
+GL ++ +A EL+
Sbjct: 365 NGLASRSKVDEAKELI 380
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
YS +I C ++ +++A NL+ M+ PD Y TLI C G + A+ L + +
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 95
K+ P LV+ L KV EAK ++AV+
Sbjct: 350 EKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVV 383
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 155/332 (46%), Gaps = 15/332 (4%)
Query: 15 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSI 74
+ DA + EM K +VV++T +IS + G EA+ + +M+ P+ +TF+
Sbjct: 103 LEDARKVLDEMPEK----NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFAT 158
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
++ + + + K + +++K + SSL+D Y ++ +A +IF +
Sbjct: 159 VLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER- 217
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
DV S + +I G ++ + ++AL +F ++H+E ++P+ VTY+SL+ L +
Sbjct: 218 ---DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 195 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGL 254
+ + R LP + +SL+D K ++ A L M + + ++ +L G
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAI----SWNAMLVGY 330
Query: 255 CKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM--EDNGCT 311
K G ++ E+F+ + K D T +++G + D L + M + G
Sbjct: 331 SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTK 390
Query: 312 PDAVTYEIIIYALFQEGDNDKAEKLLRQMIAR 343
P Y I+ L + G D+A + +++M ++
Sbjct: 391 PGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 54/304 (17%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S+++D K + +A ++ E L +R DVV+ T +I+G+ +G +EA+ + +++
Sbjct: 192 SSLLDMYAKAGQIKEAREIF-ECLPER---DVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
+ ++P+ T++ L+ AL + K +++ V +SL+D Y ++
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPDVVT----- 176
A +F+ M S++ M+ G K + + L LF+ M E + PD VT
Sbjct: 308 ARRLFDNMPER----TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 177 --------------------------------YSSLIDGLCKSGRISDAWELVNEMHSRG 204
Y ++D L ++GRI +A+E + M S+
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK- 422
Query: 205 LPPNVITYSSLLDALCKNH-HVDNAISLIKKMKHQGILPD-VYTYTILLDGLCKGGRLKD 262
P SLL A C+ H VD S+ +++ I P+ Y IL + GR D
Sbjct: 423 --PTAGVLGSLLGA-CRVHLSVDIGESVGRRLIE--IEPENAGNYVILSNLYASAGRWAD 477
Query: 263 AQEV 266
V
Sbjct: 478 VNNV 481
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 71 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 130
T++ + L + V E +V+ M G D+ TY + + + + ++ M
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 131 TRMELAPDVQSYSIMINGLCKIKM--VDDALNLFKQMHTENITPDVVTYSSLIDGLCKSG 188
P +Q S+++ L +D + ++ + + Y + L G
Sbjct: 325 MDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 189 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYT 248
R +A E+ M + G P+ ITYS L+ LCK ++ A ++ +M+ QG PD+ T+T
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 249 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA-LALMSKMED 307
IL+ G CK L A F ++L KG+++D ++I+G F+ A + LM +++
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKN 504
Query: 308 NGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
P TY+++I L + +++A LL+ M
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM 537
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 7/234 (2%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y I SL ++A + M PD +TY+ L+ G C +L+EA G+L+QM
Sbjct: 372 VYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM 431
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ PD+ T++IL+ CK ++ +A A M++ G D L+DG+ + N+
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKF 491
Query: 121 NKAEDIFNTMTR-MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
A M + + P +Y ++I+ L KIK ++AL+L + M +N Y+
Sbjct: 492 EGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP----AYAE 547
Query: 180 LIDG-LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 232
DG L K G + DA + ++ + S+ P+ Y +++A + + +A +L+
Sbjct: 548 AFDGYLAKFGTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 146/345 (42%), Gaps = 19/345 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ + L + V + +++ EM D+ TY + F + E V L M+
Sbjct: 266 YNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMM 325
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK---GGEKPDVVTYSSLMDGYCLVN 118
P + S+L+ L + V V K G+ Y + V
Sbjct: 326 DGPFKPSIQDCSLLLRYLSGSPN-PDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 119 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYS 178
++AE+I M PD +YS ++ GLCK K +++A + QM + PD+ T++
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 179 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN-----AISLIK 233
LI G CK+ + A M +G + S+LLD L + N +I L++
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKGFDID----SNLLDVLIDGFVIHNKFEGASIFLME 500
Query: 234 KMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING-LCKD 292
+K+ + P TY +L+D L K + ++A ++ Q + + Y Y +G L K
Sbjct: 501 MVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP----AYAEAFDGYLAKF 556
Query: 293 GLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLL 337
G ++A + + +P Y +I A ++EG A+ LL
Sbjct: 557 GTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 14/246 (5%)
Query: 104 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 163
VTY++ + N V + + + M D+ +Y + K +M+ + + L++
Sbjct: 263 TVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYE 322
Query: 164 QMHTENITPDVVTYSSLIDGLCKSG--------RISDAWELVNEMHSRGLPPNVITYSSL 215
M P + S L+ L S R+S +E + S+ + Y +
Sbjct: 323 YMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAV------YDGI 376
Query: 216 LDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
+L D A + K M++ G PD TY+ L+ GLCK RL++A+ V + +G
Sbjct: 377 HRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGC 436
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEK 335
D++T+TI+I G CK+ D+ALA + M + G D+ +++I + A
Sbjct: 437 FPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASI 496
Query: 336 LLRQMI 341
L +M+
Sbjct: 497 FLMEMV 502
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 37/209 (17%)
Query: 174 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 233
VTY++ + L + +++ W +V+EM + G ++ TY + K+ + + L +
Sbjct: 263 TVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYE 322
Query: 234 KMKHQGILPDVYTYTILL---------------------------------DGLCKG--- 257
M P + ++LL DG+ +
Sbjct: 323 YMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTS 382
Query: 258 -GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVT 316
GR +A+E+ + + GY D TY+ ++ GLCK +EA ++ +ME GC PD T
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKT 442
Query: 317 YEIIIYALFQEGDNDKAEKLLRQMIARGL 345
+ I+I + + DKA M+ +G
Sbjct: 443 WTILIQGHCKNNELDKALACFANMLEKGF 471
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 36/305 (11%)
Query: 33 DVVTYTTLISGFCIVGQLKEAVGLLNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVL 92
DVV+Y T+I+G+ G ++A+ ++ +M + PD +T S ++ + V + K +
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 93 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 152
+I+ G DV SSL+D Y + +E +F+ + D S++ ++ G +
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL----YCRDGISWNSLVAGYVQN 321
Query: 153 KMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 212
++AL LF+QM T + P V +SS+I + +L + G N+
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 213 SSLLDALCK-------------------------------NHHVDNAISLIKKMKHQGIL 241
S+L+D K + H A+SL ++MK QG+
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 242 PDVYTYTILLDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALA 300
P+ + +L G + +A F + + G N ++ Y + + L + G +EA
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 301 LMSKM 305
+SKM
Sbjct: 502 FISKM 506
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 85 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC----------LVNEVN------------- 121
+ + V VM + DVV+Y++++ GY +V E+
Sbjct: 192 IDSVRRVFEVM----PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 122 ------------KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 169
K ++I + R + DV S +++ K ++D+ +F +++
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR- 306
Query: 170 ITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 229
D ++++SL+ G ++GR ++A L +M + + P + +SS++ A +
Sbjct: 307 ---DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 230 SLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 289
L + G +++ + L+D K G +K A+++F + + LD ++T +I G
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV----LDEVSWTAIIMGH 419
Query: 290 CKDGLFDEALALMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
G EA++L +M+ G P+ V + ++ A G D+A M
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 136/329 (41%), Gaps = 56/329 (17%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
+ ++I L + A + EM A PD + +++ ++ L+ + +V
Sbjct: 73 WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIV 132
Query: 62 VKSINPDVYTFSILVDALCK---EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD---GYC 115
++ D+YT + L++ K G NV E P + S D C
Sbjct: 133 RLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF------DEMPQRTSNSGDEDVKAETC 186
Query: 116 LVN-EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDV 174
++ ++ +F M R DV SY+ +I G + M +DAL + ++M T ++ PD
Sbjct: 187 IMPFGIDSVRRVFEVMPR----KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 175 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 234
T SS+ LP +S +D + K + + I+K
Sbjct: 243 FTLSSV------------------------LP----IFSEYVDVI-KGKEIHGYV--IRK 271
Query: 235 MKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 294
GI DVY + L+D K R++D++ VF L Y D ++ ++ G ++G
Sbjct: 272 ----GIDSDVYIGSSLVDMYAKSARIEDSERVFSRL----YCRDGISWNSLVAGYVQNGR 323
Query: 295 FDEALALMSKMEDNGCTPDAVTYEIIIYA 323
++EAL L +M P AV + +I A
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPA 352
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 156 DDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
+D+ +FK+M + P+ V +++DGLCK G + +A +L M +G P V+ Y+++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 216 LDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
++A CK H +++A + +KM++ GI P+ ++Y +L+ GL L DA ++L G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+ +V T+ +++ LC+ ++A + + + G
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+++IF M L P+ + M++GLCK +V +A+ LF M + P+VV Y+++++
Sbjct: 118 SDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
CK+ +I DA + +M + G+ PN +Y L+ L + +D+A++ +M G P
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 281
+V T+ L+D LC+ ++ AQ L KG+ ++V+
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKA 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%)
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
++D LCK+G V+EA + +M G P+VV Y+++++ +C +++ A+ IF M
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
+AP+ SY +++ GL M+DDA+ +M +P+V T+ L+D LC+ + A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 195 ELVNEMHSRGLPPNVITYSSLLD 217
++ ++ +G NV +D
Sbjct: 257 SAIDTLNQKGFAVNVKAVKEFMD 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 57 LNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
+NQ ++ P+ Y L +++ + M +GG P+ V +++DG C
Sbjct: 94 VNQDSRETPKPEQYPQEPLPPP-------EDSDEIFKKMKEGGLIPNAV---AMLDGLCK 143
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
V +A +F M P+V Y+ ++ CK ++DA +F++M I P+ +
Sbjct: 144 DGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFS 203
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y L+ GL + DA +EM G PNV T+ L+DALC+ V+ A S I +
Sbjct: 204 YGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLN 263
Query: 237 HQGILPDVYTYTILLD 252
+G +V +D
Sbjct: 264 QKGFAVNVKAVKEFMD 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Query: 192 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
D+ E+ +M GL PN + ++LD LCK+ V A+ L M+ +G +P+V YT ++
Sbjct: 117 DSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
+ CK +++DA+ +F+ + G + +Y +++ GL + D+A+A S+M ++G +
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 312 PDAVTYEIIIYAL 324
P+ T+ ++ AL
Sbjct: 234 PNVPTFVELVDAL 246
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
++D LCKD LV +A L+ M K P+VV YT ++ FC ++++A + +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
I P+ +++ +LV L + +A + M++ G P+V T+ L+D C V V +A
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 124 EDIFNTMTRMELAPDVQS 141
+ +T+ + A +V++
Sbjct: 256 QSAIDTLNQKGFAVNVKA 273
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ ++++ CK + DA ++ +M I+P+ +Y L+ G L +AV ++M
Sbjct: 168 IYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEM 227
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 112
+ +P+V TF LVDALC+ V++A++ + + + G +V MD
Sbjct: 228 LESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+D+ E+F+ + G + M++GLCKDGL EA+ L M D G P+ V Y +
Sbjct: 116 EDSDEIFKKMKEGGL---IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 321 IYALFQEGDNDKAEKLLRQMIARGL 345
+ A + + A+++ R+M G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGI 197
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 156 DDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 215
+D+ +FK+M + P+ V +++DGLCK G + +A +L M +G P V+ Y+++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 216 LDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 275
++A CK H +++A + +KM++ GI P+ ++Y +L+ GL L DA ++L G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 276 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 309
+ +V T+ +++ LC+ ++A + + + G
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
+++IF M L P+ + M++GLCK +V +A+ LF M + P+VV Y+++++
Sbjct: 118 SDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
CK+ +I DA + +M + G+ PN +Y L+ L + +D+A++ +M G P
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 281
+V T+ L+D LC+ ++ AQ L KG+ ++V+
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKA 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 79/143 (55%)
Query: 75 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 134
++D LCK+G V+EA + +M G P+VV Y+++++ +C +++ A+ IF M
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 135 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRISDAW 194
+AP+ SY +++ GL M+DDA+ +M +P+V T+ L+D LC+ + A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 195 ELVNEMHSRGLPPNVITYSSLLD 217
++ ++ +G NV +D
Sbjct: 257 SAIDTLNQKGFAVNVKAVKEFMD 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 57 LNQMVVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 116
+NQ ++ P+ Y L +++ + M +GG P+ V +++DG C
Sbjct: 94 VNQDSRETPKPEQYPQEPLPPP-------EDSDEIFKKMKEGGLIPNAV---AMLDGLCK 143
Query: 117 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVT 176
V +A +F M P+V Y+ ++ CK ++DA +F++M I P+ +
Sbjct: 144 DGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFS 203
Query: 177 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 236
Y L+ GL + DA +EM G PNV T+ L+DALC+ V+ A S I +
Sbjct: 204 YGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLN 263
Query: 237 HQGILPDVYTYTILLD 252
+G +V +D
Sbjct: 264 QKGFAVNVKAVKEFMD 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 78/133 (58%), Gaps = 3/133 (2%)
Query: 192 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
D+ E+ +M GL PN + ++LD LCK+ V A+ L M+ +G +P+V YT ++
Sbjct: 117 DSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
+ CK +++DA+ +F+ + G + +Y +++ GL + D+A+A S+M ++G +
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 312 PDAVTYEIIIYAL 324
P+ T+ ++ AL
Sbjct: 234 PNVPTFVELVDAL 246
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%)
Query: 4 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVVK 63
++D LCKD LV +A L+ M K P+VV YT ++ FC ++++A + +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
I P+ +++ +LV L + +A + M++ G P+V T+ L+D C V V +A
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 124 EDIFNTMTRMELAPDVQS 141
+ +T+ + A +V++
Sbjct: 256 QSAIDTLNQKGFAVNVKA 273
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
+Y+ ++++ CK + DA ++ +M I+P+ +Y L+ G L +AV ++M
Sbjct: 168 IYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEM 227
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 112
+ +P+V TF LVDALC+ V++A++ + + + G +V MD
Sbjct: 228 LESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 261 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPDAVTYEII 320
+D+ E+F+ + G + M++GLCKDGL EA+ L M D G P+ V Y +
Sbjct: 116 EDSDEIFKKMKEGGL---IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 321 IYALFQEGDNDKAEKLLRQMIARGL 345
+ A + + A+++ R+M G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGI 197
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 31/329 (9%)
Query: 31 SPDVVTYTTLI-------SGFCI-----VGQLKEAVGLLN-----QMVVKSINPDVYTFS 73
S +VV+Y T + S FC + L E L + +M +S+ PD +TF
Sbjct: 60 SKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFP 119
Query: 74 ILVDALC--KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 131
+ A K G + K + ++ G D+ T ++L+ Y L+ ++ A +F+
Sbjct: 120 FVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENP 179
Query: 132 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLIDGLCKSGRIS 191
+ DV +Y+++I+GL K + + A LF M D+V+++SLI G +
Sbjct: 180 QR----DVVTYNVLIDGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCR 231
Query: 192 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPDVYTYTILL 251
+A +L +EM + GL P+ + S L A ++ ++ K + + D + T L+
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLV 291
Query: 252 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 311
D K G + A E+F+ K + T+ MI GL G + + KM +G
Sbjct: 292 DFYAKCGFIDTAMEIFELCSDK----TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK 347
Query: 312 PDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
PD VT+ ++ G D+A L QM
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQM 376
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 14/269 (5%)
Query: 2 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 61
Y+ +ID L K + + A L+ M + D+V++ +LISG+ + +EA+ L ++MV
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 62 VKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 121
+ PD + A + G ++ K + + D + L+D Y ++
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 122 KAEDIFNTMTRMELAPD--VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSS 179
A +IF EL D + +++ MI GL + ++ F++M + I PD VT+ S
Sbjct: 302 TAMEIF------ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFIS 355
Query: 180 LIDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KH 237
++ G SG + +A L ++M S + + Y + D L + ++ A +I++M K
Sbjct: 356 VLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKD 415
Query: 238 QGILPDVYTYTILLDGLCKGGRLKDAQEV 266
G + ++ LL G G ++ A++
Sbjct: 416 GGNREKLLAWSGLLGGCRIHGNIEIAEKA 444
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 155/340 (45%), Gaps = 12/340 (3%)
Query: 1 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 60
M +T+++ K + +A ++ +M + D VT+TTLISG+ + +A+ NQM
Sbjct: 97 MGNTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 61 VVKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 120
+ +P+ +T S ++ A E + + +K G +V S+L+D Y +
Sbjct: 153 LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 121 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSL 180
+ A+ +F+ +E DV S++ +I G + + AL LF+ M + P +Y+SL
Sbjct: 213 DDAQLVFDA---LESRNDV-SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 181 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 240
+G + + M G ++LLD K+ + +A + ++ +
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR-- 326
Query: 241 LPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 300
DV ++ LL + G K+A F+++ G + ++ ++ GL DE
Sbjct: 327 --DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 301 LMSKMEDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
M+ +G P+A Y ++ L + GD ++A + + +M
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 43/271 (15%)
Query: 3 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV 62
S ++D + L++DA ++ + ++ + V++ LI+G ++A+ L M+
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 63 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 122
P ++++ L A G +++ K V A MIK GEK ++L+D Y ++
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 315
Query: 123 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTYSSLID 182
A IF+ + + DVV+++SL+
Sbjct: 316 ARKIFDRLAKR---------------------------------------DVVSWNSLLT 336
Query: 183 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 242
+ G +A EM G+ PN I++ S+L A + +D + MK GI+P
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVP 396
Query: 243 DVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 273
+ + Y ++D L + G L A +++ I+
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEMPIE 427
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 168/343 (48%), Gaps = 20/343 (5%)
Query: 5 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVV-K 63
++ S K K +N A L+ EM P+VV++T++ISG+ +G+ + A+ + +M +
Sbjct: 70 LVISYVKLKEINTARKLFDEM----CEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDR 125
Query: 64 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 123
+ P+ YTF+ + A + + KN+ A + G + ++V SSL+D Y N+V A
Sbjct: 126 PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETA 185
Query: 124 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPDVVTY---SSL 180
+F++M + +V S++ MI + +A+ LF+ + +T D +S+
Sbjct: 186 RRVFDSM--IGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA-LTSDRANQFMLASV 242
Query: 181 IDGLCKSGRISDAW-ELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 238
I GR+ W ++ + + +R G N + +SLLD K + A + +++
Sbjct: 243 ISACSSLGRLQ--WGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH 300
Query: 239 GILPDVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 298
++ +YT ++ K G + A ++F +++ N + T +++ GL +E
Sbjct: 301 SVI----SYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEG 356
Query: 299 LALMSKM-EDNGCTPDAVTYEIIIYALFQEGDNDKAEKLLRQM 340
L +S M E G PD+ Y ++ L + G D+A +L + +
Sbjct: 357 LEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTI 399