Miyakogusa Predicted Gene
- Lj2g3v2102980.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2102980.1 Non Chatacterized Hit- tr|I1N3L5|I1N3L5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,31.74,3e-19,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; PPR: p,CUFF.38691.1
(207 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 3e-42
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 5e-42
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 8e-42
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 166 1e-41
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 1e-41
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 165 2e-41
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 4e-41
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 9e-41
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 5e-40
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 5e-40
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 1e-39
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 1e-39
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 1e-39
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 6e-39
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 7e-39
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 9e-39
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 5e-37
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 8e-37
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 2e-36
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 3e-36
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 5e-35
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 1e-34
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 3e-34
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 5e-34
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 140 8e-34
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 9e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 5e-32
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 133 8e-32
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 9e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 1e-31
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 1e-31
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-31
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-31
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-31
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-31
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 6e-31
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 2e-30
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 3e-30
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 3e-30
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 4e-30
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 5e-29
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 8e-29
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 122 2e-28
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 6e-28
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 6e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 8e-28
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 9e-28
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-27
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 3e-27
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 5e-27
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-26
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 115 2e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 2e-26
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-26
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 115 3e-26
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 7e-26
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 8e-26
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 9e-26
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-25
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 2e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 112 2e-25
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 5e-25
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-25
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 6e-25
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 109 1e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-24
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 4e-24
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 108 4e-24
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 6e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 107 8e-24
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 3e-23
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 104 4e-23
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 1e-22
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-22
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 3e-22
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 3e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 3e-22
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 3e-22
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 4e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-22
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 8e-22
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 8e-22
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 9e-22
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-21
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 99 2e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 99 3e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 4e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 5e-21
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 6e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 7e-21
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 8e-21
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 8e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 8e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 96 1e-20
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-20
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 4e-20
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 7e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 8e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 1e-19
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-19
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 6e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 6e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 8e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 90 9e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 90 9e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 3e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 4e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 7e-18
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 7e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 87 9e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 87 1e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 86 2e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 86 2e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 3e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 3e-17
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 4e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 6e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 6e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 84 7e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 7e-17
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 8e-17
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 8e-17
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 8e-17
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 4e-16
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 6e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 7e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 4e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 7e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 9e-15
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 9e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 77 9e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-14
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 75 2e-14
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 4e-14
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-14
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 7e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 8e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 1e-13
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-13
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 3e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 8e-13
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 8e-13
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 69 2e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 3e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 4e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 68 4e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 5e-12
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 5e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 5e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 7e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 9e-12
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 66 1e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 66 2e-11
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 2e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 2e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 66 2e-11
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 65 3e-11
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 65 4e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 65 4e-11
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 6e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 64 6e-11
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 9e-11
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 1e-10
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 1e-10
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 61 5e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 60 1e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 60 1e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 2e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 59 2e-09
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 59 2e-09
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 59 3e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 3e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 58 4e-09
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 58 4e-09
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 58 5e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 57 7e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 8e-09
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 57 8e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 9e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-08
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 55 3e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 3e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 5e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 54 5e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 54 5e-08
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 54 7e-08
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 8e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 54 9e-08
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 54 1e-07
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 53 1e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 53 1e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 52 2e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 52 2e-07
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 3e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 52 4e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 52 4e-07
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-07
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 6e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 7e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 9e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 4e-06
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 9e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 1e-05
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 1e-05
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 167 bits (424), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 121/187 (64%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T AL LL +++ + +VV++NTIIDSLCK + V+DA NLF EM TK I P V+TY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI C G+ A LL++M+ K INP+++TFN L+DA KEG+ EA+ + MIK
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P++ TYNSL++G+C+ ++K K +F M + PDV +Y+ +I GFCK K V++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 182 ALNLLKH 188
L +
Sbjct: 419 GTELFRE 425
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 96/170 (56%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
+S P++ YN++++ C ++ A +F MV+K P V+TYNTLI GFC ++E
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
L EM + + D +T+ TL+ L +G A+ V M+ +G P+++TY+ L+D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
G C ++ K ++F+ M + E+ D++ Y+ MI G CK VD+ +L
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 107/181 (59%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ ++ + QPN+V Y +++ LCK + A NL ++M +I V+ +NT+I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C ++ A+ L EM K I P+V+T+++L+ L GR +A +L+ MI++ P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+VT+N+L+D + + + + +++ M + + PD+++Y+ ++NGFC +D+A +
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 187 K 187
+
Sbjct: 389 E 389
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A Q+ + K P+VV YNT+I CK K V D LF EM + + +T
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI G G + A + +MV + PD++T++ L+D L G++++A V M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K K ++ Y ++++G C +V+ D+F +++ V P+V +Y+ MI+G C +++
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 181 EALNLLK 187
EA LLK
Sbjct: 558 EAYALLK 564
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 92/163 (56%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
YN +I+ C+ ++ A L +M+ P+++T ++L+ G+C ++ AV L+++MV
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
PD ITF TL+ L + EA ++ M++ G +PN+VTY +++G C + +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
++ N M ++ DV ++ +I+ CK + VD+ALNL K
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 95/184 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL LL ++ +P++V +++++ C K ++DA L +MV P IT+ TLI
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + AV L++ MV + P+++T+ +V+ L K G A N+L M +
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV +N+++D C + V+ ++F M + P+V +YS +I+ C +A LL
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 187 KHPI 190
I
Sbjct: 319 SDMI 322
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 88/162 (54%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+L R++ + + V Y T+I L D ++A +F +MV+ + P ++TY+ L+ G
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C G++E A+ + + M I D+ + T+++ + K G+V + ++ + +G KPNV
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
VTYN+++ G C + + + + M + P+ +Y+ +I
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 90/166 (54%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++V +N ++ ++ K K + +L +M I + TYN LI FC Q+ A+ L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ P ++T ++L++ R+ +A ++ M++ G +P+ +T+ +L+ G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ + + M Q P++ +Y +++NG CK D ALNLL
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ +Q+ P+++ Y+ ++D LC + + A +F M I + Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T+I G C G+++ L + LK + P+V+T+NT++ L + ++EA +L M +
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
+G PN TYN+L+ + + + ++ M D + ++ N
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%)
Query: 16 GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME 75
G++ Y I+ + D ++DA LF MV R P+++ +N L+ + + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 76 AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
+ L +M I + T+N L++ + ++ A +L M+K G +P++VT +SL+
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 136 DGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+GYC K ++ + + M +M PD +++ +I+G EA+ L+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 167 bits (422), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 121/182 (66%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL LL++++ +P VV+YNTIID+LC K VNDA NLF+EM K I P V+TYN+LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G+ A LL++M+ + INP+V+TF+ L+DA KEG++ EA+ + MIK P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ TY+SL++G+C+ +++ K +F M + P+V +Y+ +I GFCK K VDE + L
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 187 KH 188
+
Sbjct: 420 RE 421
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 110/187 (58%), Gaps = 2/187 (1%)
Query: 3 HTRP--ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A+ L+ ++ K QP++V Y +++ LCK ++ A +L +M +I P V+
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT+I C + A+ L EM K I P+V+T+N+L+ L GR +A +L+ MI
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ PNVVT+++L+D + ++ + + +++ M + + PD+++YS +INGFC +D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 181 EALNLLK 187
EA ++ +
Sbjct: 379 EAKHMFE 385
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 3/206 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL + + PNVV ++ +ID+ K+ + +A L+ EM+ + I P + TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI GFC+ +++ A + M+ K P+V+T+NTL+ K RV E + M +
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTY +L+ G+ +E + + +F M V PD+ +YSI+++G C V+
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 182 AL---NLLKHPILYWMLYAKAIMLTG 204
AL L+ + +Y IM+ G
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEG 510
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A + + K PNVV YNT+I CK K V++ LF EM + + +T
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI GF + + A + +MV + PD++T++ L+D L G+V+ A V +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ +P++ TYN +++G C +V D+F +++ V P+V +Y+ M++GFC+ + +
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 181 EALNLLKH 188
EA L +
Sbjct: 554 EADALFRE 561
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 103/185 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ +S P++ Y+++I+ C +++A ++F M++K P V+TY
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC +++ + L EM + + + +T+ TL+ + A+ V M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+++TY+ L+DG C +V +F + + ++ PD+++Y+IMI G CK V++
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 182 ALNLL 186
+L
Sbjct: 520 GWDLF 524
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L ++ +P++V N++++ C ++DA +L +MV P T+NTLI
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + AV L++ MV+K PD++T+ +V+ L K G + A ++L M + +P
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
VV YN+++D C K VN ++F M + P+V +Y+ +I C +A LL
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 187 KHPI 190
I
Sbjct: 315 SDMI 318
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 97/179 (54%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L Q+Q N+ Y+ +I+ C+ ++ A + ++M+ P ++T N+L+ G
Sbjct: 101 ISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNG 160
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
FC ++ AV L+ +MV PD TFNTL+ L + R EA ++ M+ +G +P+
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VTY +++G C +++ + M Q ++ P V Y+ +I+ C K V++ALNL
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 90/164 (54%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L R++ + N V Y T+I + + ++A +F +MV+ + P ++TY+ L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ + + + PD+ T+N +++ + K G+V++ ++ + +G KP
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
NVVTY ++M G+C + +F M + PD +Y+ +I
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 91/167 (54%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++V ++ ++ ++ K + +L +M IS + TY+ LI FC Q+ A+ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ PD++T N+L++ R+ +A +++ M++ G +P+ T+N+L+ G
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ + + M PD+ +Y I++NG CK +D AL+LLK
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 84/151 (55%)
Query: 36 DKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVIT 95
D ++DA NLF +MV R P+++ ++ L+ + + + + L +M I+ ++ T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 96 FNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMT 155
++ L++ + ++ A VLA M+K G +P++VT NSL++G+C ++ + M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 156 QMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+M PD ++++ +I+G + EA+ L+
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+ +Q+ P+++ Y+ ++D LC + V A +F + ++ P + TYN +I G C
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G++E L + LK + P+V+T+ T++ ++G +EA + M +EG P+
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
TYN+L+ + + + ++ M D + ++ N
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL + +Q +P++ YN +I+ +CK V D ++LF + K + P V+TY
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T++ GFC G E A L EM + PD T+NTL+ A ++G K A +I+
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG----DKAASAELIR 595
Query: 122 E 122
E
Sbjct: 596 E 596
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 124/186 (66%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL LL +++ + +VV+Y+T+IDSLCK + V+DA NLF+EM K I P V TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI C G+ A LL++M+ + INP+V+TFN+L+DA +KEG++ EA+ + MI+
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PN+VTYNSL++G+C+ +++ + IF M + PDV +Y+ +INGFCK K V +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 182 ALNLLK 187
+ L +
Sbjct: 399 GMELFR 404
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A Q+ + K P+VV YNT+I+ CK K V D LF +M + + +T
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI GF + A + +MV ++P+++T+NTL+D L K G++++A V +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K +P++ TYN + +G C +V D+F +++ V PDV +Y+ MI+GFCK + +
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 181 EALNLL 186
EA L
Sbjct: 538 EAYTLF 543
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 35/220 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL + + PNVV +N++ID+ K+ + +A LF EM+ + I P ++TY
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKE---------- 111
N+LI GFC+ +++ A + MV K PDV+T+NTL++ K +V +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 112 -------------------------AKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
A+ V M+ +G PN++TYN+L+DG C ++ K
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+F + + ++ PD+++Y+IM G CK V++ +L
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 103/176 (58%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ ++ K QP++V Y +I+ LCK + A NL ++M +I V+ Y+T+I
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C ++ A+ L EM K I PDV T+++L+ L GR +A +L+ M++ P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
NVVT+NSL+D + ++ + + +F+ M Q + P++ +Y+ +INGFC +DEA
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 97/165 (58%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N+ YN +I+ LC+ ++ A + +M+ P+++T N+L+ GFC ++ AV L+
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
++MV PD +TF TLV L + + EA ++ M+ +G +P++VTY ++++G C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
E + ++ N M + ++ DV YS +I+ CK + VD+ALNL
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L ++ P++V N++++ C +++A L +MV P +T+ TL+
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + AV L+ MV+K PD++T+ +++ L K G A N+L M K +
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV Y++++D C + V+ ++F M + PDV++YS +I+ C +A LL
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L R + + N V Y T+I + ++A +F +MV+ + P ++TYNTL+
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ + + + PD+ T+N + + + K G+V++ ++ + +G KP
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
+V+ YN+++ G+C + +F M + PD +Y+ +I
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + +Q+ PN++ YNT++D LCK+ + A +F + ++ P + TYN +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E L + LK + PDVI +NT++ K+G +EA + M ++G P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
+ TYN+L+ + + + ++ M D +Y ++ +
Sbjct: 554 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 90/180 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L ++ P++V ++ ++ ++ K K + + +M +S + TYN +I
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C Q+ A+ +L +M+ P ++T N+L++ R+ EA ++ M++ G +P
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ VT+ +L+ G + ++ + M PD+ +Y +ING CK D ALNLL
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 86/153 (56%)
Query: 39 VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
+++A +LF EMV R P+++ ++ L+ + + + + +M + ++ ++ T+N
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
+++ L + ++ A +L M+K G P++VT NSL++G+C +++ + + M +M
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 159 VTPDVWSYSIMINGFCKIKMVDEALNLLKHPIL 191
PD +++ +++G + EA+ L++ ++
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + +Q +P++ YN + + +CK V D ++LF + K + P VI Y
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NT+I GFC G E A L +M PD T+NTL+ A ++G K A +IK
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD----KAASAELIK 579
Query: 122 E 122
E
Sbjct: 580 E 580
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L + K +P+V+ YNT+I CK L +AY LF +M P TY
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEA 112
NTLI G A+ L+ EM D T+ + D L +GR+ +
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKG 608
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 124/187 (66%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T AL LLR+++ ++ + +V Y+TIIDSLC+D ++ A +LF EM TK I +V+TY
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+L+ G C G+ LL +MV + I P+VITFN L+D KEG+++EA + MI
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN++TYN+LMDGYC+ +++ ++ + M + + +PD+ +++ +I G+C +K VD+
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 182 ALNLLKH 188
+ + ++
Sbjct: 387 GMKVFRN 393
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
LL+ + + PNV+ +N ++D K+ + +A L+ EM+T+ ISP +ITYNTL+ G+C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+ ++ A +L+ MV +PD++TF +L+ RV + V + K G N V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
TY+ L+ G+C ++ +++F M V PDV +Y I+++G C +++AL + +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFE 462
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 104/185 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A +L +++ + PN++ YNT++D C +++A N+ MV + SP ++T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI G+C+V +++ + + + + + + +T++ LV + G++K A+ + M+
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+V+TY L+DG C ++ K +IF + + ++ + Y+ +I G CK V++
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 182 ALNLL 186
A NL
Sbjct: 492 AWNLF 496
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 100/184 (54%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L ++ +P+ +NT+I L + V++A L MV P V+TYN+++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G A+ LL +M +++ DV T++T++D+L ++G + A ++ M +G K
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VVTYNSL+ G C + N + M E+ P+V +++++++ F K + EA L
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 187 KHPI 190
K I
Sbjct: 322 KEMI 325
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 96/182 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L +++ P++V ++ ++ + K N + ++ I+ + T N +I
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC + A +L +++ PD TFNTL+ L EG+V EA ++ M++ G +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VVTYNS+++G C + + D+ M + V DV++YS +I+ C+ +D A++L
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 187 KH 188
K
Sbjct: 252 KE 253
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 87/166 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+++ R I + N V Y+ ++ C+ + A LF EMV+ + P V+TY L+
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ + ++ ++ ++ + T+++ + K G+V++A N+ + +G KP
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
NV+TY ++ G C +++ + M + P+ +Y+ +I
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L +Q++ N+ N +I+ C+ AY++ +++ P T+NTLI G
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+ G++ AV L++ MV PDV+T+N++V+ + + G A ++L M + K +
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
V TY++++D C ++ +F M + V +Y+ ++ G CK ++ LLK
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 86/170 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A +L +++ P+V+ Y ++D LC + + A +F ++ ++ ++ Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T+I G C G++E A L + K + P+V+T+ ++ L K+G + EA +L M +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
+G PN TYN+L+ + ++ + + M + D S ++I+
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 75/148 (50%)
Query: 40 NDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTL 99
+DA LF EM+ R P+++ ++ Q + ++ L I ++ T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 100 VDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
++ + + A +VL ++K G +P+ T+N+L+ G L +V++ + + M +
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLLK 187
PDV +Y+ ++NG C+ AL+LL+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLR 217
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 35/137 (25%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT- 60
G AL++ +Q +VMY TII+ +CK V DA+NLF + K + P V+T
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 61 ----------------------------------YNTLIFGFCIVGQMEAAVCLLNEMVL 86
YNTLI G + A+ L+ EM
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 87 KSINPDVITFNTLVDAL 103
+ D + ++D L
Sbjct: 572 CGFSADASSIKMVIDML 588
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 117/186 (62%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG T AL LL +++ + +VV+YN IID LCKD A NLF+EM K I P VIT
Sbjct: 54 MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+ +I FC G+ A LL +M+ + INPDV+TF+ L++AL KEG+V EA+ + M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G P +TYNS++DG+C +N K + ++M +PDV ++S +ING+CK K VD
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 181 EALNLL 186
+ +
Sbjct: 234 NGMEIF 239
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 106/186 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A QLLR + + P+VV ++ +I++L K+ V++A ++ +M+ + I PT ITY
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N++I GFC ++ A +L+ M KS +PDV+TF+TL++ K RV + M +
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTY +L+ G+C V +++ +D+ N M V P+ ++ M+ C K + +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Query: 182 ALNLLK 187
A +L+
Sbjct: 305 AFAILE 310
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL L+ ++ + QP Y TII+ LCK A NL S+M I V+ Y
Sbjct: 24 GRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIY 79
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I C G A L EM K I PDVIT++ ++D+ + GR +A+ +L MI+
Sbjct: 80 NAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 122 EGEKPNVVTYNSLMDGYCLVKE--VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
P+VVT+++L++ LVKE V++ ++I+ M + + P +Y+ MI+GFCK +
Sbjct: 140 RQINPDVVTFSALINA--LVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 180 DEALNLL 186
++A +L
Sbjct: 198 NDAKRML 204
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P + YN++ID CK +NDA + M +K SP V+T++TLI G+C +++ + +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
EM + I + +T+ TL+ + G + A+++L VMI G PN +T+ S++ C
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 141 VKEVNKTKDIFNTMTQME 158
KE+ K I + + E
Sbjct: 299 KKELRKAFAILEDLQKSE 316
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 49 MVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR 108
MV P V+T+ TL+ G C G++ A+ L++ MV + P + T+++ L K G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 109 VKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSI 168
+ A N+L+ M + K +VV YN+++D C +++F M + PDV +YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 169 MINGFCKIKMVDEALNLLK 187
MI+ FC+ +A LL+
Sbjct: 117 MIDSFCRSGRWTDAEQLLR 135
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 120/187 (64%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A LL +++ +P V++YNTIID LCK K ++DA NLF EM TK I P V+TY
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI C G+ A LL++M+ + INPDV TF+ L+DA KEG++ EA+ + M+K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P++VTY+SL++G+C+ +++ K +F M PDV +Y+ +I GFCK K V+E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 182 ALNLLKH 188
+ + +
Sbjct: 415 GMEVFRE 421
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 107/181 (59%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ ++ K QP++V Y +++ LCK + A+NL ++M ++ P V+ YNT+I
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C M+ A+ L EM K I P+V+T+++L+ L GR +A +L+ MI+ P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V T+++L+D + ++ + + +++ M + + P + +YS +INGFC +DEA +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 187 K 187
+
Sbjct: 385 E 385
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 106/185 (57%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ +S P++V Y+++I+ C +++A +F MV+K P V+TY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC ++E + + EM + + + +T+N L+ L + G A+ + M+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN++TYN+L+DG C ++ K +F + + ++ P +++Y+IMI G CK V++
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 182 ALNLL 186
+L
Sbjct: 520 GWDLF 524
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 2/188 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A Q+ + K P+VV YNT+I CK K V + +F EM + + +T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI G G + A + EMV + P+++T+NTL+D L K G++++A V +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ +P + TYN +++G C +V D+F ++ V PDV +Y+ MI+GFC+ +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 181 EALNLLKH 188
EA L K
Sbjct: 554 EADALFKE 561
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 95/179 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ Q+ QPN V +NT+I L ++A L MV K P ++TY ++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G + A LLN+M + P V+ +NT++D L K + +A N+ M +G +P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
NVVTY+SL+ C + + + M + ++ PDV+++S +I+ F K + EA L
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 99/181 (54%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L Q+Q N Y+ +I+ C+ + A + +M+ P ++T ++L+ G
Sbjct: 101 ISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 160
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+C ++ AV L+++M + P+ +TFNTL+ L + EA ++ M+ +G +P+
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+VTY +++G C + + ++ N M Q ++ P V Y+ +I+G CK K +D+ALNL K
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 188 H 188
Sbjct: 281 E 281
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L ++ +PN+V +++++ C K +++A L +M P +T+NTLI
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + A+ L++ MV K PD++T+ +V+ L K G A N+L M + +P
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V+ YN+++DG C K ++ ++F M + P+V +YS +I+ C +A LL
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 187 KHPI 190
I
Sbjct: 315 SDMI 318
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+++ R++ + N V YN +I L + + A +F EMV+ + P ++TYNTL+
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ + + + P + T+N +++ + K G+V++ ++ + +G KP
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
+VV YN+++ G+C + +F M + P+ Y+ +I
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L ++ P+++ ++ ++ ++ K + +L +M I TY+ LI
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC Q+ A+ +L +M+ P+++T ++L++ R+ EA ++ M G +P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N VT+N+L+ G L + ++ + + M PD+ +Y +++NG CK D A NLL
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + +Q +P + YN +I+ +CK V D ++LF + K + P V+ Y
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NT+I GFC G E A L EM P+ +NTL+ A ++G +EA A +IK
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD-REAS---AELIK 595
Query: 122 E 122
E
Sbjct: 596 E 596
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%)
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
+++ AV L EMV P +I F+ L+ A++K + ++ M G N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 133 SLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
L++ +C ++ + M ++ P++ + S ++NG+C K + EA+ L+
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 164 bits (415), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 122/187 (65%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A++LLR+++ ++ + + V Y+ IID LCKD +++A+NLF+EM K +ITY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC G+ + LL +M+ + I+P+V+TF+ L+D+ KEG+++EA +L M++
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN +TYNSL+DG+C + + + + M PD+ +++I+ING+CK +D+
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 182 ALNLLKH 188
L L +
Sbjct: 422 GLELFRE 428
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 104/185 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G +LLR + + PNVV ++ +IDS K+ + +A L EM+ + I+P ITY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI GFC ++E A+ +++ M+ K +PD++TFN L++ K R+ + + M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTYN+L+ G+C ++ K +F M V PD+ SY I+++G C +++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 182 ALNLL 186
AL +
Sbjct: 492 ALEIF 496
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 106/185 (57%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A QLL+++ + PN + YN++ID CK+ + +A + M++K P ++T+
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G+C +++ + L EM L+ + + +T+NTLV + G+++ AK + M+
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+P++V+Y L+DG C E+ K +IF + + ++ D+ Y I+I+G C VD+
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 182 ALNLL 186
A +L
Sbjct: 527 AWDLF 531
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L+ ++ QPN V Y +++ +CK A L +M + I + Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ +I G C G ++ A L NEM +K D+IT+NTL+ GR + +L MIK
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PNVVT++ L+D + ++ + + M Q + P+ +Y+ +I+GFCK ++E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 182 ALNLL 186
A+ ++
Sbjct: 387 AIQMV 391
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 93/169 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+Q++ + K P+++ +N +I+ CK ++D LF EM + + +TYNTL+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC G++E A L EMV + + PD++++ L+D L G +++A + + K +
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
++ Y ++ G C +V+ D+F ++ V D +Y+IMI+ C+
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + +I +P+ V++NT+++ LC + V++A L MV PT+IT NTL+
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C+ G++ AV L++ MV P+ +T+ +++ + K G+ A +L M + K
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ V Y+ ++DG C ++ ++FN M D+ +Y+ +I GFC D+ LL
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 187 KHPI 190
+ I
Sbjct: 322 RDMI 325
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 100/182 (54%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+L+ ++ +P ++ NT+++ LC + V+DA L MV P +TY ++
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C GQ A+ LL +M ++I D + ++ ++D L K+G + A N+ M +G K
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++TYN+L+ G+C + + M + +++P+V ++S++I+ F K + EA LL
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 187 KH 188
K
Sbjct: 357 KE 358
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 95/181 (52%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L L +Q++ K ++ + +I+ C+ + ++ A++ +++ P + +NTL+ G
Sbjct: 108 LALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNG 167
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C+ ++ A+ L++ MV P +IT NTLV+ L G+V +A ++ M++ G +PN
Sbjct: 168 LCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
VTY +++ C + ++ M + + D YSI+I+G CK +D A NL
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287
Query: 188 H 188
Sbjct: 288 E 288
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 84/166 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
L+L R++ + N V YNT++ C+ + A LF EMV++R+ P +++Y L+
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ + ++ + D+ + ++ + +V +A ++ + +G K
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
+ YN ++ C ++K +F MT+ PD +Y+I+I
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L R + P V+ +N + ++ K K L +M +K I+ ++ T + +I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC ++ A + +++ PD + FNTL++ L E RV EA ++ M++ G KP
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++T N+L++G CL +V+ + + M + P+ +Y ++N CK A+ LL
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 187 K 187
+
Sbjct: 252 R 252
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%)
Query: 39 VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
+DA +LF +M+ R PTVI +N L Q E + L +M K I + T +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
+++ + ++ A + + ++K G +P+ V +N+L++G CL V++ ++ + M +M
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 159 VTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
P + + + ++NG C V +A+ L+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 163 bits (412), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 119/187 (63%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A LL +++ + +VV++NTIIDSLCK + V+DA NLF EM TK I P V+TY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI C G+ A LL++M+ K INP+++TFN L+DA KEG+ EA+ + MIK
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P++ TYNSL++G+C+ ++K K +F M + PD+ +Y+ +I GFCK K V++
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 182 ALNLLKH 188
L +
Sbjct: 344 GTELFRE 350
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 104/186 (55%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H AL L ++++ K +PNVV Y+++I LC +DA L S+M+ K+I+P ++T+N
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
LI F G+ A L ++M+ +SI+PD+ T+N+L++ R+ +AK + M+ +
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
P++ TYN+L+ G+C K V ++F M+ + D +Y+ +I G D A
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 183 LNLLKH 188
+ K
Sbjct: 380 QKVFKQ 385
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 95/170 (55%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
+S P++ YN++I+ C ++ A +F MV+K P + TYNTLI GFC ++E
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
L EM + + D +T+ TL+ L +G A+ V M+ +G P+++TY+ L+D
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
G C ++ K ++F+ M + E+ D++ Y+ MI G CK VD+ +L
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 108/181 (59%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ ++ + QPN+V Y +++ LCK ++ A+NL ++M +I V+ +NT+I
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C ++ A+ L EM K I P+V+T+++L+ L GR +A +L+ MI++ P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+VT+N+L+D + + + + + + M + + PD+++Y+ +INGFC +D+A +
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 187 K 187
+
Sbjct: 314 E 314
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A Q+ + K P++ YNT+I CK K V D LF EM + + +T
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI G G + A + +MV + PD++T++ L+D L G++++A V M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K K ++ Y ++++G C +V+ D+F +++ V P+V +Y+ MI+G C +++
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 181 EALNLLK 187
EA LLK
Sbjct: 483 EAYALLK 489
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 100/181 (55%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L ++Q N+ YN +I+ C+ ++ A L +M+ P+++T ++L+ G
Sbjct: 30 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+C ++ AV L+++MV PD ITF TL+ L + EA ++ M++ G +PN
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+VTY +++G C +++ ++ N M ++ DV ++ +I+ CK + VD+ALNL K
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 188 H 188
Sbjct: 210 E 210
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 96/184 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL LL ++ +P++V +++++ C K ++DA L +MV P IT+ TLI
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + AV L++ MV + P+++T+ +V+ L K G + A N+L M +
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV +N+++D C + V+ ++F M + P+V +YS +I+ C +A LL
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 187 KHPI 190
I
Sbjct: 244 SDMI 247
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 88/164 (53%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+L R++ + + V Y T+I L D ++A +F +MV+ + P ++TY+ L+ G
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C G++E A+ + + M I D+ + T+++ + K G+V + ++ + +G KPNV
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
VTYN+++ G C + + + + M + PD +Y+ +I
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 90/166 (54%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++ +N ++ ++ K K + +L +M IS + TYN LI FC Q+ A+ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ P ++T ++L++ R+ +A ++ M++ G +P+ +T+ +L+ G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ + + M Q P++ +Y +++NG CK +D A NLL
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ +Q+ P+++ Y+ ++D LC + + A +F M I + Y
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T+I G C G+++ L + LK + P+V+T+NT++ L + ++EA +L M +
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
+G P+ TYN+L+ + + + ++ M D + ++ N
Sbjct: 494 DGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 73/138 (52%)
Query: 49 MVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR 108
MV R P++ +N L+ + + + + L +M I+ ++ T+N L++ + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 109 VKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSI 168
+ A +L M+K G +P++VT +SL++GYC K ++ + + M +M PD +++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 169 MINGFCKIKMVDEALNLL 186
+I+G EA+ L+
Sbjct: 121 LIHGLFLHNKASEAVALV 138
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 160 bits (405), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 121/187 (64%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL LL++++ + +VV+Y TIID+LC K VNDA NLF+EM K I P V+TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI C G+ A LL++M+ + INP+V+TF+ L+DA KEG++ EA+ + MIK
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P++ TY+SL++G+C+ +++ K +F M + P+V +Y+ +I GFCK K V+E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 182 ALNLLKH 188
+ L +
Sbjct: 414 GMELFRE 420
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 107/185 (57%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ +S P++ Y+++I+ C +++A ++F M++K P V+TY
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC ++E + L EM + + + +T+NTL+ L + G A+ + M+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+++TY+ L+DG C ++ K +F + + ++ PD+++Y+IMI G CK V++
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 182 ALNLL 186
+L
Sbjct: 519 GWDLF 523
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 105/187 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL + + PNVV ++ +ID+ K+ + +A L+ EM+ + I P + TY
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI GFC+ +++ A + M+ K P+V+T+NTL+ K RV+E + M +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTYN+L+ G + + + IF M V PD+ +YSI+++G CK +++
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 182 ALNLLKH 188
AL + ++
Sbjct: 484 ALVVFEY 490
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A + + K PNVV YNT+I CK K V + LF EM + + +T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNTLI G G + A + +MV + PD+IT++ L+D L K G++++A V +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K +P++ TYN +++G C +V D+F +++ V P+V Y+ MI+GFC+ + +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 181 EALNLLKH 188
EA L +
Sbjct: 553 EADALFRE 560
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 106/181 (58%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ ++ + QP++ Y T+++ LCK ++ A +L +M +I V+ Y T+I
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C + A+ L EM K I P+V+T+N+L+ L GR +A +L+ MI+ P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVVT+++L+D + ++ + + +++ M + + PD+++YS +INGFC +DEA ++
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 187 K 187
+
Sbjct: 384 E 384
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 95/184 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L ++ +P++V +++++ C K +++A L +M P +T+NTLI
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + AV L++ MV + PD+ T+ T+V+ L K G + A ++L M K +
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV Y +++D C K VN ++F M + P+V +Y+ +I C +A LL
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 187 KHPI 190
I
Sbjct: 314 SDMI 317
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 89/166 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L R++ + N V YNT+I L + + A +F +MV+ + P +ITY+ L+
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ + + + PD+ T+N +++ + K G+V++ ++ + +G KP
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
NV+ Y +++ G+C + +F M + P+ +Y+ +I
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 95/179 (53%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L ++Q ++ YN +I+ C+ + A + +M+ P ++T ++L+ G
Sbjct: 100 ISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG 159
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+C ++ AV L+++M + P+ +TFNTL+ L + EA ++ M+ G +P+
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD 219
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ TY ++++G C +++ + M + ++ DV Y+ +I+ C K V++ALNL
Sbjct: 220 LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L ++ P++V +N ++ ++ K + +L M RIS + +YN LI
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC Q+ A+ +L +M+ PD++T ++L++ R+ EA ++ M +P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N VT+N+L+ G L + ++ + + M PD+++Y ++NG CK +D AL+LL
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 187 K 187
K
Sbjct: 244 K 244
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ +++ P+++ Y+ ++D LCK + A +F + ++ P + TY
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G C G++E L + LK + P+VI + T++ ++G +EA + M +
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
+G PN TYN+L+ + + ++ M D + S++IN
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L + K +PNV++Y T+I C+ L +A LF EM P TY
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEA 112
NTLI G A+ L+ EM D T + +++ L +GR++++
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 160 bits (405), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 121/187 (64%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL LL++++ + +VV+YNTIID LCK K ++DA NLF+EM K I P V TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI C G+ A LL++M+ + INP+V+TF+ L+DA KEG++ EA+ + MIK
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P++ TY+SL++G+C+ +++ K +F M + P+V +YS +I GFCK K V+E
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 182 ALNLLKH 188
+ L +
Sbjct: 417 GMELFRE 423
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 109/181 (60%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ Q+ + QP++V Y T+++ LCK ++ A +L +M +I V+ YNT+I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C M+ A+ L EM K I PDV T+++L+ L GR +A +L+ MI+ P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVVT+++L+D + ++ + + +++ M + + PD+++YS +INGFC +DEA ++
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 187 K 187
+
Sbjct: 387 E 387
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A + + K PNVV Y+T+I CK K V + LF EM + + +T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI GF + A + +MV ++P+++T+N L+D L K G++ +A V +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ +P++ TYN +++G C +V ++F ++ V+P+V +Y+ MI+GFC+ +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 181 EALNLLK 187
EA +LLK
Sbjct: 556 EADSLLK 562
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 3/206 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL + + PNVV ++ +ID+ K+ + +A L+ EM+ + I P + TY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI GFC+ +++ A + M+ K P+V+T++TL+ K RV+E + M +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTY +L+ G+ ++ + + +F M + V P++ +Y+I+++G CK + +
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 182 AL---NLLKHPILYWMLYAKAIMLTG 204
A+ L+ + +Y IM+ G
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEG 512
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 101/185 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ +S P++ Y+++I+ C +++A ++F M++K P V+TY
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+TLI GFC ++E + L EM + + + +T+ TL+ + A+ V M+
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN++TYN L+DG C ++ K +F + + + PD+++Y+IMI G CK V++
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 182 ALNLL 186
L
Sbjct: 522 GWELF 526
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 100/184 (54%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L ++ +P++V +++++ C K ++DA L +MV P T+ TLI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + AV L+++MV + PD++T+ T+V+ L K G + A ++L M K +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV YN+++DG C K ++ ++F M + PDV++YS +I+ C +A LL
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 187 KHPI 190
I
Sbjct: 317 SDMI 320
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L Q+Q ++ Y+ I+ C+ ++ A + ++M+ P ++T ++L+ G
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG 162
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+C ++ AV L+++MV PD TF TL+ L + EA ++ M++ G +P+
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VTY ++++G C +++ + M + ++ DV Y+ +I+G CK K +D+ALNL
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 87/166 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L R++ + N V Y T+I + + ++A +F +MV+ + P ++TYN L+
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++ A+ + + ++ PD+ T+N +++ + K G+V++ + + +G P
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
NV+ YN+++ G+C + + M + P+ +Y+ +I
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++V +N ++ ++ K +L +M T IS + TY+ I FC Q+ A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ PD++T ++L++ R+ +A ++ M++ G KP+ T+ +L+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ ++ + + M Q PD+ +Y ++NG CK +D AL+LLK
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 83/150 (55%)
Query: 39 VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
V+DA +LF +MV R P+++ +N L+ + + E + L +M I+ D+ T++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
++ + ++ A VLA M+K G +P++VT +SL++GYC K ++ + + M +M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 159 VTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
PD ++++ +I+G EA+ L+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + +Q + +P++ YN +I+ +CK V D + LF + K +SP VI Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NT+I GFC G E A LL +M P+ T+NTL+ A ++G +EA A +IK
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD-REAS---AELIK 597
Query: 122 E 122
E
Sbjct: 598 E 598
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 123/187 (65%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T AL LL +++ + NVV+Y+T+IDSLCK + +DA NLF+EM K + P VITY
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI C G+ A LL++M+ + INP+++TF+ L+DA K+G++ +A+ + MIK
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PN+ TY+SL++G+C++ + + K + M + + P+V +Y+ +INGFCK K VD+
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 182 ALNLLKH 188
+ L +
Sbjct: 412 GMELFRE 418
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 106/181 (58%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ ++ + QP++V Y +++ LCK + A NL ++M +I V+ Y+T+I
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C + A+ L EM K + P+VIT+++L+ L GR +A +L+ MI+ P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+VT+++L+D + ++ K + ++ M + + P++++YS +INGFC + + EA +L
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 187 K 187
+
Sbjct: 382 E 382
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 111/206 (53%), Gaps = 3/206 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL + + PN+V ++ +ID+ K + A L+ EM+ + I P + TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI GFC++ ++ A +L M+ K P+V+T+NTL++ K RV + + M +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTY +L+ G+ ++ + + +F M + V P++ +Y+I+++G CK + +
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 182 AL---NLLKHPILYWMLYAKAIMLTG 204
A+ L+ + +Y IM+ G
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 93/174 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ +S PN+ Y+++I+ C + +A + M+ K P V+TY
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC +++ + L EM + + + +T+ TL+ + A+ V M+
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
G PN++TYN L+DG C ++ K +F + + + PD+++Y+IMI G CK
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 92/165 (55%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N+ YN +I+ C+ ++ A L +M+ P ++T N+L+ GFC ++ AV L+
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
++MV PD +TF TL+ L + EA ++ M++ G +P++VTY ++++G C
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + ++ N M ++ +V YS +I+ CK + D+ALNL
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V N++++ C ++DA L +MV P +T+ TLI G + + AV
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L++ MV + PD++T+ +V+ L K G A N+L M + NVV Y++++D C
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
+ + ++F M V P+V +YS +I+ C +A LL I
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 89/166 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+++ ++ ++ ++ K + + +M IS + TYN LI FC ++ A+ L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ PD++T N+L++ R+ +A ++ M++ G KP+ VT+ +L+ G L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ + + M Q PD+ +Y ++NG CK D ALNLL
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
R GK++ Y ++ + D ++DA LF M R P++I ++ L+ +
Sbjct: 36 RAFSGKTSYD----YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKM 91
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
+ + + +M + I+ ++ T+N L++ + R+ A +L M+K G +P++VT
Sbjct: 92 NKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTL 151
Query: 132 NSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NSL++G+C ++ + + M +M PD +++ +I+G EA+ L+
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 58/104 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L R++ + N V Y T+I + + ++A +F +MV+ + P ++TYN L+
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVK 110
G C G++ A+ + + ++ PD+ T+N +++ + K G+ K
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 118/186 (63%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A++LLR+++ + + + V Y+ IID LCKD +++A+NLF+EM K +I Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TLI GFC G+ + LL +M+ + I PDV+ F+ L+D KEG+++EA+ + MI+
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+ VTY SL+DG+C +++K + + M P++ +++I+ING+CK ++D+
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 182 ALNLLK 187
L L +
Sbjct: 406 GLELFR 411
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 93/166 (56%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K PN+ +N +I+ CK L++D LF +M + + +TYNTLI GFC +G++E
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A L EMV + + PD++++ L+D L G ++A + + K + ++ YN ++
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
G C +V+ D+F ++ V PDV +Y+IMI G CK + EA
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 103/185 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A +L +++ + P+ V Y ++ID CK+ ++ A ++ MV+K P + T+
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G+C ++ + L +M L+ + D +T+NTL+ + G+++ AK + M+
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+P++V+Y L+DG C E K +IF + + ++ D+ Y+I+I+G C VD+
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 182 ALNLL 186
A +L
Sbjct: 511 AWDLF 515
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L+ ++ QPN V Y ++ +CK A L +M ++I + Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ +I G C G ++ A L NEM +K D+I + TL+ GR + +L MIK
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 122 EGEKPNVVTYNSLMDGYCLVKE--VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
P+VV +++L+D C VKE + + +++ M Q ++PD +Y+ +I+GFCK +
Sbjct: 311 RKITPDVVAFSALID--CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 180 DEALNLL 186
D+A ++L
Sbjct: 369 DKANHML 375
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L+ ++ +P ++ N +++ LC + V+DA L MV P +TY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ C GQ A+ LL +M + I D + ++ ++D L K+G + A N+ M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G K +++ Y +L+ G+C + + M + ++TPDV ++S +I+ F K + E
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 182 ALNLLKHPI 190
A L K I
Sbjct: 336 AEELHKEMI 344
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+ V ++T+I+ LC + V++A L MV PT+IT N L+ G C+ G++ AV
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L++ MV P+ +T+ ++ + K G+ A +L M + K + V Y+ ++DG C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
++ ++FN M D+ Y+ +I GFC D+ LL+ I
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 96/179 (53%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L L +Q++ K N+ + +I+ C+ + ++ A++ +++ P +T++TLI G
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C+ G++ A+ L++ MV P +IT N LV+ L G+V +A ++ M++ G +PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
VTY ++ C + ++ M + ++ D YSI+I+G CK +D A NL
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 85/171 (49%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +L +++ + +P++V Y ++D LC + A +F ++ ++ +
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I G C +++ A L + LK + PDV T+N ++ L K+G + EA + M
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
++G PN TYN L+ + + K+ + + + + D + ++++
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 93/181 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L +++ +P ++ ++ + + + K + +L +M K I+ + T + +I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C ++ A + +++ PD +TF+TL++ L EGRV EA ++ M++ G KP
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++T N+L++G CL +V+ + + M + P+ +Y ++ CK A+ LL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 187 K 187
+
Sbjct: 236 R 236
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 79/149 (53%)
Query: 40 NDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTL 99
+DA +LF EM R P +I ++ L Q + + L +M LK I ++ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 100 VDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
++ + ++ A + + +IK G +P+ VT+++L++G CL V++ ++ + M +M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLLKH 188
P + + + ++NG C V +A+ L+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDR 202
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 119/182 (65%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A LL +++ + NVV+Y+T+IDSLCK + +DA NLF+EM K + P VITY++LI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C + A LL++M+ + INP+V+TFN L+DA KEG++ EA+ + MIK P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ TY+SL++G+C+ +++ K +F M + P+V +Y+ +INGFCK K +DE + L
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 187 KH 188
+
Sbjct: 424 RE 425
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 116/186 (62%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H AL L +++ K +PNV+ Y+++I LC + +DA L S+M+ ++I+P V+T+N
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
LI F G++ A L +EM+ +SI+PD+ T+++L++ R+ EAK++ +MI +
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
PNVVTYN+L++G+C K +++ ++F M+Q + + +Y+ +I+GF + + D A
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 183 LNLLKH 188
+ K
Sbjct: 455 QMVFKQ 460
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A + + K PNVV YNT+I+ CK K +++ LF EM + + +T
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI GF + A + +MV ++P+++T+NTL+D L K G++++A V +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ +P + TYN +++G C +V D+F +++ V PDV Y+ MI+GFC+ + +
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 181 EALNLLK 187
EA L +
Sbjct: 558 EADALFR 564
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 108/181 (59%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ ++ + QPN+V Y +++ LCK ++ A+NL ++M +I V+ Y+T+I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C + A+ L EM K + P+VIT+++L+ L R +A +L+ MI+ P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVVT+N+L+D + ++ + + +++ M + + PD+++YS +INGFC +DEA ++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 187 K 187
+
Sbjct: 389 E 389
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 104/185 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ +S P++ Y+++I+ C +++A ++F M++K P V+TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC +++ V L EM + + + +T+ TL+ + A+ V M+
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN++TYN+L+DG C ++ K +F + + ++ P +++Y+IMI G CK V++
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 182 ALNLL 186
+L
Sbjct: 524 GWDLF 528
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 98/179 (54%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L ++Q N+ YN +I+ C+ ++ A L +M+ P+++T ++L+ G
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+C ++ AV L+++MV PD ITF TL+ L + EA ++ M++ G +PN
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VTY +++G C +++ ++ N M ++ +V YS +I+ CK + D+ALNL
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL LL ++ +P++V +++++ C K ++DA L +MV P IT+ TLI
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + AV L++ MV + P+++T+ +V+ L K G + A N+L M +
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVV Y++++D C + + ++F M V P+V +YS +I+ C + +A LL
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 187 KHPI 190
I
Sbjct: 319 SDMI 322
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 85/156 (54%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L R++ + N V Y T+I + + ++A +F +MV+ + P ++TYNTL+
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ + + + P + T+N +++ + K G+V++ ++ + +G KP
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+V+ YN+++ G+C + +F M + PD
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 90/166 (54%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++ +N ++ ++ K K + +L +M IS + TYN LI FC Q+ A+ L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ P ++T ++L++ R+ +A ++ M++ G +P+ +T+ +L+ G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ + + M Q P++ +Y +++NG CK +D A NLL
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 86/171 (50%)
Query: 16 GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME 75
G++ Y I+ + ++DA LF MV R P++ +N L+ + + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 76 AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
+ L +M I+ ++ T+N L++ + ++ A +L M+K G +P++VT +SL+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 136 DGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+GYC K ++ + + M +M PD +++ +I+G EA+ L+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + +Q +P + YN +I+ +CK V D ++LF + K + P VI Y
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVIT 95
NT+I GFC G E A L +M PD T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 121/186 (65%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A++LLR+++ ++ + + V Y+ IID LCK +++A+NLF+EM K I+ +ITY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI GFC G+ + LL +M+ + INP+V+TF+ L+D+ KEG+++EA+ + MI
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+ +TY SL+DG+C ++K + + M P++ +++I+ING+CK +D+
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 182 ALNLLK 187
L L +
Sbjct: 422 GLELFR 427
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A +L +++ + P+ + Y ++ID CK+ ++ A + MV+K P + T+
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G+C +++ + L +M L+ + D +T+NTL+ + G++ AK + M+
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PN+VTY L+DG C E K +IF + + ++ D+ Y+I+I+G C VD+
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 182 ALNLL 186
A +L
Sbjct: 527 AWDLF 531
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H A Q++ + K PN+ +N +I+ CK ++D LF +M + + +TYN
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
TLI GFC +G++ A L EMV + + P+++T+ L+D L G ++A + + K
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ ++ YN ++ G C +V+ D+F ++ V P V +Y+IMI G CK + EA
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L+ ++ QPN V Y +++ +CK A L +M + I + Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ +I G C G ++ A L NEM +K I ++IT+N L+ GR + +L MIK
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PNVVT++ L+D + ++ + +++ M + PD +Y+ +I+GFCK +D+
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 182 A 182
A
Sbjct: 387 A 387
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 94/171 (54%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+PN + ++T+I+ LC + V++A L MV P +IT NTL+ G C+ G+ A+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L+++MV P+ +T+ +++ + K G+ A +L M + K + V Y+ ++DG C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
++ ++FN M +T ++ +Y+I+I GFC D+ LL+ I
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 96/179 (53%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L L +Q++ K N+ + +I+ C+ + + A++ +++ P IT++TLI G
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C+ G++ A+ L++ MV PD+IT NTLV+ L G+ EA ++ M++ G +PN
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
VTY +++ C + ++ M + + D YSI+I+G CK +D A NL
Sbjct: 228 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L+ ++ +P+++ NT+++ LC +A L +MV P +TY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ C GQ A+ LL +M ++I D + ++ ++D L K G + A N+ M
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G N++TYN L+ G+C + + M + ++ P+V ++S++I+ F K + E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 182 ALNLLKHPI 190
A L K I
Sbjct: 352 AEELHKEMI 360
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 93/181 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L R + P V+ ++ + ++ K K + L +M K I+ + T + +I
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC ++ A + +++ P+ ITF+TL++ L EGRV EA ++ M++ G KP
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++T N+L++G CL + + + + M + P+ +Y ++N CK A+ LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 187 K 187
+
Sbjct: 252 R 252
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 83/154 (53%)
Query: 39 VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
+DA +LF +M+ R PTVI ++ L Q + + L +M LK I ++ T +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
+++ + ++ A + + +IK G +PN +T+++L++G CL V++ ++ + M +M
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 159 VTPDVWSYSIMINGFCKIKMVDEALNLLKHPILY 192
PD+ + + ++NG C EA+ L+ + Y
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 90/186 (48%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +L +++ + PN+V Y ++D LC + A +F ++ ++ +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I G C +++ A L + LK + P V T+N ++ L K+G + EA+ + M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G P+ TYN L+ + + K+ + + + + D + ++I+ ++
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKK 630
Query: 181 EALNLL 186
L++L
Sbjct: 631 SFLDML 636
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 120/187 (64%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL LL +++ + NVV++NTIIDSLCK + V A +LF+EM TK I P V+TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI C G+ A LL+ M+ K INP+V+TFN L+DA KEG++ EA+ + MI+
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+ +TYN L++G+C+ +++ K +F M + P++ +Y+ +INGFCK K V++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 182 ALNLLKH 188
+ L +
Sbjct: 417 GVELFRE 423
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 106/186 (56%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H A+ L +++ K +PNVV YN++I+ LC +DA L S M+ K+I+P V+T+N
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
LI F G++ A L EM+ +SI+PD IT+N L++ R+ EAK + M+ +
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
PN+ TYN+L++G+C K V ++F M+Q + + +Y+ +I GF + D A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 183 LNLLKH 188
+ K
Sbjct: 453 QMVFKQ 458
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 108/181 (59%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ Q+ + QP++V Y T+++ LCK ++ A NL ++M RI V+ +NT+I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C +E AV L EM K I P+V+T+N+L++ L GR +A +L+ M+++ P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVVT+N+L+D + ++ + + + M Q + PD +Y+++INGFC +DEA +
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 187 K 187
K
Sbjct: 387 K 387
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL + K PNVV +N +ID+ K+ + +A L EM+ + I P ITY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI GFC+ +++ A + MV K P++ T+NTL++ K RV++ + M +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTY +++ G+ + + + +F M V D+ +YSI+++G C +D
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 182 ALNLLKH 188
AL + K+
Sbjct: 487 ALVIFKY 493
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 101/187 (54%), Gaps = 5/187 (2%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A Q+ + + K PN+ YNT+I+ CK K V D LF EM + + +T
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y T+I GF G ++A + +MV + D++T++ L+ L G++ A + +
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K + N+ YN++++G C +V + D+F +++ + PDV +Y+ MI+G C +++
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQ 552
Query: 181 EALNLLK 187
EA +L +
Sbjct: 553 EADDLFR 559
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 96/182 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L ++ +P++V +++++ C K ++DA L +MV P T+ TLI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + AV L+++MV + PD++T+ T+V+ L K G + A N+L M K
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVV +N+++D C + V D+F M + P+V +Y+ +IN C +A LL
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 187 KH 188
+
Sbjct: 317 SN 318
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ +S P+ + YN +I+ C +++A +F MV+K P + TY
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC ++E V L EM + + + +T+ T++ + G A+ V M+
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+++TY+ L+ G C +++ IF + + E+ +++ Y+ MI G CK V E
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 182 ALNLL 186
A +L
Sbjct: 522 AWDLF 526
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 96/179 (53%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L Q+Q ++ Y+ I+ C+ ++ A + ++M+ P ++T ++L+ G
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG 162
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+C ++ AV L+++MV PD TF TL+ L + EA ++ M++ G +P+
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VTY ++++G C +++ ++ N M + +V ++ +I+ CK + V+ A++L
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 89/166 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++V +N ++ ++ K +L +M T IS + TY+ I FC Q+ A+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ PD++T ++L++ R+ +A ++ M++ G KP+ T+ +L+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ + + M Q PD+ +Y ++NG CK +D ALNLL
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 83/150 (55%)
Query: 39 VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
V+DA +LF +MV R P+++ +N L+ + + E + L +M I+ D+ T++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
++ + ++ A VLA M+K G +P++VT +SL++GYC K ++ + + M +M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 159 VTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
PD ++++ +I+G EA+ L+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L R++ + N V Y TII + + A +F +MV+ R+ ++TY+ L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 67 GFCIVGQMEAAVCLL-----NEMVLK---------------------------SINPDVI 94
G C G+++ A+ + +EM L SI PDV+
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 95 TFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTM 154
T+NT++ L + ++EA ++ M ++G PN TYN+L+ + + ++ M
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Query: 155 TQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
D + S++ N ++ LN+L
Sbjct: 597 RSSGFVGDASTISLVTNMLHDGRLDKSFLNML 628
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL + + +Q + N+ +YNT+I+ +CK V +A++LF + I P V+TY
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTY 538
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA 102
NT+I G C ++ A L +M P+ T+NTL+ A
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 120/187 (64%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G++ AL L R+++ ++ + +VV Y+ +IDSLCKD +DA +LF+EM K I V+TY
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI G C G+ + +L EM+ ++I PDV+TF+ L+D KEG++ EAK + MI
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+ +TYNSL+DG+C +++ +F+ M PD+ +YSI+IN +CK K VD+
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 182 ALNLLKH 188
+ L +
Sbjct: 404 GMRLFRE 410
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 100/181 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A Q+ + K +P++V Y+ +I+S CK K V+D LF E+ +K + P ITYNTL+
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC G++ AA L EMV + + P V+T+ L+D L G + +A + M K
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 488
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ YN ++ G C +V+ +F +++ V PDV +Y++MI G CK + EA L
Sbjct: 489 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Query: 187 K 187
+
Sbjct: 549 R 549
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 104/185 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ + P+ + YN++ID CK+ +++A +F MV+K P ++TY
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI +C +++ + L E+ K + P+ IT+NTLV + G++ AK + M+
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+VVTY L+DG C E+NK +IF M + +T + Y+I+I+G C VD+
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 182 ALNLL 186
A +L
Sbjct: 509 AWSLF 513
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 109/186 (58%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ++LR++ G++ P+VV ++ +ID K+ + +A L++EM+T+ I+P ITY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI GFC + A + + MV K PD++T++ L+++ K RV + + +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN +TYN+L+ G+C ++N K++F M V P V +Y I+++G C +++
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 182 ALNLLK 187
AL + +
Sbjct: 474 ALEIFE 479
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 100/181 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL L+ ++ QP+ V Y +++ LCK A +LF +M + I +V+ Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ +I C G + A+ L NEM +K I DV+T+++L+ L +G+ + +L MI
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+VVT+++L+D + ++ + K+++N M + PD +Y+ +I+GFCK + E
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 182 A 182
A
Sbjct: 369 A 369
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 87/160 (54%)
Query: 29 IIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS 88
+I+ C+ K + A+++ P IT++TL+ GFC+ G++ AV L++ MV
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 89 INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTK 148
PD++T +TL++ L +GRV EA ++ M++ G +P+ VTY +++ C
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 149 DIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
D+F M + + V YSI+I+ CK D+AL+L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 88/171 (51%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+ + ++T+++ C + V++A L MV + P ++T +TLI G C+ G++ A+
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L++ MV PD +T+ +++ L K G A ++ M + K +VV Y+ ++D C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
+ +FN M + DV +YS +I G C D+ +L+ I
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 73/137 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L +++ + P+VV Y ++D LC + +N A +F +M R++ + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G C +++ A L + K + PDV+T+N ++ L K+G + EA + M +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 122 EGEKPNVVTYNSLMDGY 138
+G P+ TYN L+ +
Sbjct: 554 DGCTPDDFTYNILIRAH 570
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%)
Query: 39 VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
VNDA +LF M+ R PT I +N L Q + + M L I D+ T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
+++ ++ ++ A +VL K G +P+ +T+++L++G+CL V++ + + M +M+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 159 VTPDVWSYSIMINGFCKIKMVDEALNLLKHPILY 192
PD+ + S +ING C V EAL L+ + Y
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L + K +P+VV YN +I LCK +++A LF +M +P TYN LI
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALS 104
+ ++V L+ EM + + D T ++D LS
Sbjct: 569 AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 119/187 (63%), Gaps = 4/187 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG T+ AL LL +++ +P+VV+Y+ IID LCKD +DA LFSEM+ K I+P V T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I GFC G+ A LL +M+ + INPDV+TFN L+ A KEG++ EA+ + M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
P+ VTYNS++ G+C + K +F+ M +PDV +++ +I+ +C+ K VD
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVD 449
Query: 181 EALNLLK 187
E + LL+
Sbjct: 450 EGMQLLR 456
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 108/186 (58%), Gaps = 15/186 (8%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFS---------------EMVTKRISPTVITYNTL 64
QP+VV +NT++ LC + +++A LF +MV ++P VIT+NTL
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G C+ G++ A L+N+MV K ++ DV+T+ T+V+ + K G K A N+L+ M +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
KP+VV Y++++D C + + +F+ M + + P+V++Y+ MI+GFC +A
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 185 LLKHPI 190
LL+ I
Sbjct: 353 LLRDMI 358
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Query: 19 AQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAV 78
A P+VV +NTIID C+ K V++ L E+ + + TYNTLI GFC V + AA
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
L EM+ + PD IT N L+ + +++EA + V+ + V YN ++ G
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
C +V++ D+F ++ V PDV +Y++MI+GFC + +A N+L H +
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA-NVLFHKM 598
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L Q+ P V+ +NT+I+ LC + V +A L ++MV K + V+TY T++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C +G ++A+ LL++M I PDV+ ++ ++D L K+G +A+ + + M+++G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING-------FCKIKMV 179
NV TYN ++DG+C + + + M + E+ PDV +++ +I+ F K+
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 180 DEALNLLKHP 189
DE L+ P
Sbjct: 390 DEMLHRCIFP 399
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 97/180 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+QLLR+I + N YNT+I C+ +N A +LF EM++ + P IT N L++
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC ++E A+ L + + I+ D + +N ++ + K +V EA ++ + G +P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V TYN ++ G+C ++ +F+ M PD +Y+ +I G K +D+++ L+
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 5 RP--ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
RP A+ L R+++ + N+ +N +I C ++ + + F ++ P V+T+N
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 63 TLIFGFCIVGQME---------------AAVCLLNEMVLKSINPDVITFNTLVDALSKEG 107
TL+ G C+ ++ AV L ++MV + P VITFNTL++ L EG
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 108 RVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS 167
RV EA ++ M+ +G +VVTY ++++G C + + ++ + M + + PDV YS
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 168 IMINGFCK 175
+I+ CK
Sbjct: 301 AIIDRLCK 308
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 42 AYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD 101
A +L+ +M +RI + ++N LI FC ++ ++ ++ PDV+TFNTL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 102 ALSKEGRVKEAKNVLAVMIKEGE---------------KPNVVTYNSLMDGYCLVKEVNK 146
L E R+ EA + M++ G P V+T+N+L++G CL V +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ N M + DV +Y ++NG CK+ ALNLL
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+L IQ + V YN II +CK V++A++LF + + P V TYN +I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC + A L ++M PD T+NTL+ K G + ++ +++ M G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 127 NVVTYNSLMD 136
+ T + D
Sbjct: 641 DAFTIKMVAD 650
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 37 KLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITF 96
K ++DA + F MV R T + N +I F + + + A+ L +M ++ I ++ +F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 97 NTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN----------- 145
N L+ ++ + + + K G +P+VVT+N+L+ G CL ++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 146 ----KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +F+ M ++ +TP V +++ +ING C V EA L+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+V YN +I C ++DA LF +M P TYNTLI G G+++ ++
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEA 112
L++EM + D T + D ++ +GR+ ++
Sbjct: 629 LISEMRSNGFSGDAFTIKMVADLIT-DGRLDKS 660
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 119/187 (63%), Gaps = 4/187 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG T+ AL LL +++ +P+VV+Y+ IID LCKD +DA LFSEM+ K I+P V T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I GFC G+ A LL +M+ + INPDV+TFN L+ A KEG++ EA+ + M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
P+ VTYNS++ G+C + K +F+ M +PDV +++ +I+ +C+ K VD
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVD 449
Query: 181 EALNLLK 187
E + LL+
Sbjct: 450 EGMQLLR 456
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 107/183 (58%), Gaps = 15/183 (8%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFS---------------EMVTKRISPTVITYNTL 64
QP+VV +NT++ LC + +++A LF +MV ++P VIT+NTL
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G C+ G++ A L+N+MV K ++ DV+T+ T+V+ + K G K A N+L+ M +
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
KP+VV Y++++D C + + +F+ M + + P+V++Y+ MI+GFC +A
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 185 LLK 187
LL+
Sbjct: 353 LLR 355
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 1/172 (0%)
Query: 19 AQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAV 78
A P+VV +NTIID C+ K V++ L E+ + + TYNTLI GFC V + AA
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
L EM+ + PD IT N L+ + +++EA + V+ + V YN ++ G
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
C +V++ D+F ++ V PDV +Y++MI+GFC + +A N+L H +
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA-NVLFHKM 598
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L Q+ P V+ +NT+I+ LC + V +A L ++MV K + V+TY T++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C +G ++A+ LL++M I PDV+ ++ ++D L K+G +A+ + + M+++G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING-------FCKIKMV 179
NV TYN ++DG+C + + + M + E+ PDV +++ +I+ F K+
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 180 DEALNLLKHP 189
DE L+ P
Sbjct: 390 DEMLHRCIFP 399
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 97/180 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+QLLR+I + N YNT+I C+ +N A +LF EM++ + P IT N L++
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC ++E A+ L + + I+ D + +N ++ + K +V EA ++ + G +P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V TYN ++ G+C ++ +F+ M PD +Y+ +I G K +D+++ L+
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 5 RP--ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
RP A+ L R+++ + N+ +N +I C ++ + + F ++ P V+T+N
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 63 TLIFGFCIVGQME---------------AAVCLLNEMVLKSINPDVITFNTLVDALSKEG 107
TL+ G C+ ++ AV L ++MV + P VITFNTL++ L EG
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 108 RVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS 167
RV EA ++ M+ +G +VVTY ++++G C + + ++ + M + + PDV YS
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 168 IMINGFCK 175
+I+ CK
Sbjct: 301 AIIDRLCK 308
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 42 AYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD 101
A +L+ +M +RI + ++N LI FC ++ ++ ++ PDV+TFNTL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 102 ALSKEGRVKEAKNVLAVMIKEGE---------------KPNVVTYNSLMDGYCLVKEVNK 146
L E R+ EA + M++ G P V+T+N+L++G CL V +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ N M + DV +Y ++NG CK+ ALNLL
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 37 KLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITF 96
K ++DA + F MV R T + N +I F + + + A+ L +M ++ I ++ +F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 97 NTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN----------- 145
N L+ ++ + + + K G +P+VVT+N+L+ G CL ++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 146 ----KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +F+ M ++ +TP V +++ +ING C V EA L+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 156 bits (394), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 111/180 (61%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL + Q+ G +PNVV+YNTIID LCK K V++A +L + M I P V+TYN+LI
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+ A +++ M + I PDV TFN L+DA KEGRV EA+ MI+ P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++VTY+ L+ G C+ +++ +++F M PDV +YSI+ING+CK K V+ + L
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 93/171 (54%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K P+VV Y+ +I+ CK K V LF EM + + +TY LI G+C G++
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A + MV ++P++IT+N L+ L G++++A +LA M K G ++VTYN ++
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
G C EV DI+ ++ + PD+W+Y+ M+ G K + EA L +
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFR 490
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 103/185 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +++ + + P+V +N +ID+ K+ V++A + EM+ + + P ++TY
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI+G C+ +++ A + MV K PDV+T++ L++ K +V+ + M +
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTY L+ GYC ++N ++IF M V P++ +Y+++++G C +++
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 182 ALNLL 186
AL +L
Sbjct: 415 ALVIL 419
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 97/184 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + ++ +S P++V Y+ +I LC +++A +F MV+K P V+TY
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI G+C ++E + L EM + + + +T+ L+ + G++ A+ + M+
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN++TYN L+ G C ++ K I M + + D+ +Y+I+I G CK V +
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 182 ALNL 185
A ++
Sbjct: 450 AWDI 453
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 97/175 (55%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L Q+Q N+ N +++ C+ ++ A + +M+ P+++T+ +L+ G
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
FC ++ A+ + ++MV P+V+ +NT++D L K +V A ++L M K+G P+
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
VVTYNSL+ G C + + + MT+ E+ PDV++++ +I+ K V EA
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 84/154 (54%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++ ++ ++ ++ K K + L+ +M I + T N L+ FC Q+ A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ P ++TF +L++ + RV +A + M+ G KPNVV YN+++DG C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
K+V+ D+ N M + + PDV +Y+ +I+G C
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 82/148 (55%)
Query: 39 VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
++D+ +LF MV R P++ ++ L+ + + + + L +M + I ++ T N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
L++ + ++ A + L MIK G +P++VT+ SL++G+C V +F+ M M
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 159 VTPDVWSYSIMINGFCKIKMVDEALNLL 186
P+V Y+ +I+G CK K VD AL+LL
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLL 209
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L ++ + N V Y +I C+ +N A +F MV + P +ITYN L+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ +L +M ++ D++T+N ++ + K G V +A ++ + +G P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 127 NVVTYNSLMDGYCLVKEVNKTKD-IFNTMTQMEVTPD 162
++ TY ++M G K + + D +F M + + P+
Sbjct: 465 DIWTYTTMMLGL-YKKGLRREADALFRKMKEDGILPN 500
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ R++ PN++ YN ++ LC + + A + ++M + ++TY
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G C G++ A + + + + PD+ T+ T++ L K+G +EA + M +
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 122 EGEKPN 127
+G PN
Sbjct: 495 DGILPN 500
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 107/169 (63%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V YN IIDSLCK K VNDA++ F E+ K I P V+TY L+ G C + A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
LL++M+ K I P+VIT++ L+DA K G+V EAK + M++ P++VTY+SL++G C
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
L +++ +F+ M DV SY+ +INGFCK K V++ + L +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 105/176 (59%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++I+ K +PNVV Y +++ LC +DA L S+M+ K+I+P VITY+ L+
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
F G++ A L EMV SI+PD++T+++L++ L R+ EA + +M+ +G
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+VV+YN+L++G+C K V +F M+Q + + +Y+ +I GF + VD+A
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 98/176 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L ++ +P+ V ++++ C+ V+DA +L +MV P ++ YN +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C ++ A E+ K I P+V+T+ LV+ L R +A +L+ MIK+ P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
NV+TY++L+D + +V + K++F M +M + PD+ +YS +ING C +DEA
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 101/185 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ S P++V Y+++I+ LC +++A +F MV+K V++Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC ++E + L EM + + + +T+NTL+ + G V +A+ + M
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P++ TYN L+ G C E+ K IF M + E+ D+ +Y+ +I G CK V+E
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 182 ALNLL 186
A +L
Sbjct: 454 AWSLF 458
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A Q+ + K +VV YNT+I+ CK K V D LF EM + + +T
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNTLI GF G ++ A ++M I+PD+ T+N L+ L G +++A + M
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K ++VTY +++ G C +V + +F +++ + PD+ +Y+ M++G C ++
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 181 E 181
E
Sbjct: 488 E 488
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 86/150 (57%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++L R++ + N V YNT+I + V+ A FS+M ISP + TYN L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++E A+ + +M + ++ D++T+ T++ + K G+V+EA ++ + +G KP
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ 156
++VTY ++M G C +++ + ++ M Q
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 95/184 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L + P++V +N ++ ++ K K + +L +M I + T+N +I
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC Q+ A+ +L +M+ PD +T +LV+ + RV +A +++ M++ G KP
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++V YN+++D C K VN D F + + + P+V +Y+ ++NG C +A LL
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 187 KHPI 190
I
Sbjct: 249 SDMI 252
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 91/163 (55%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
+N +I+ C V+ A ++ +M+ P +T +L+ GFC ++ AV L+++MV
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
PD++ +N ++D+L K RV +A + + ++G +PNVVTY +L++G C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + M + ++TP+V +YS +++ F K V EA L +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + Q+ P++ YN ++ LC + + A +F +M + + ++TY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T+I G C G++E A L + LK + PD++T+ T++ L +G + E + + M +
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 122 EGEKPNVVTYNSLMDG 137
EG N T L DG
Sbjct: 499 EGLMKNDCT---LSDG 511
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 106/169 (62%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+PNVV+YNT+ID LCK+ +N A L +EM K + V+TYNTL+ G C G+ A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+L +M+ +SINPDV+TF L+D K+G + EA+ + MI+ PN VTYNS+++G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + K F+ M P+V +Y+ +I+GFCK +MVDE + L +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 3/206 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++LR + +S P+VV + +ID K +++A L+ EM+ + P +TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N++I G C+ G++ A + M K P+V+T+NTL+ K V E + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
EG ++ TYN+L+ GYC V ++ DIF M VTPD+ ++ I+++G C ++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 182 AL---NLLKHPILYWMLYAKAIMLTG 204
AL + ++ Y + A IM+ G
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHG 430
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A +L +++ S PN V YN+II+ LC + DA F M +K P V+TY
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC ++ + L M + N D+ T+NTL+ + G+++ A ++ M+
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+++T+ L+ G C+ E+ F+ M + E + +Y+IMI+G CK V++
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 182 ALNLL 186
A L
Sbjct: 440 AWELF 444
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 94/187 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + + K PNVV YNT+I CK ++V++ LF M + + + TY
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI G+C VG++ A+ + MV + + PD+IT L+ L G ++ A M +
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ +V YN ++ G C +V K ++F + V PD +Y+IMI G CK E
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 474
Query: 182 ALNLLKH 188
A L++
Sbjct: 475 ADELIRR 481
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 89/165 (53%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
+ +I C+ ++ A ++ +M+ P+++T+ +L+ GFC+V ++ A L+ MV
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
P+V+ +NTL+D L K G + A +L M K+G +VVTYN+L+ G C +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
+ M + + PDV +++ +I+ F K +DEA L K I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
M H++P ++ + +A N+ Y T+I K +L +++L+S
Sbjct: 62 MVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS------------- 108
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ LI FC ++ A+ +L +M+ P ++TF +L+ R+ +A +++ +M+
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K G +PNVV YN+L+DG C E+N ++ N M + + DV +Y+ ++ G C
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 181 EALNLLK 187
+A +L+
Sbjct: 229 DAARMLR 235
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%)
Query: 41 DAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLV 100
DA+ LF EMV + P+++ + L+ + + E + +M L I+ D+ +F L+
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 101 DALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVT 160
+ R+ A +VL M+K G +P++VT+ SL+ G+CLV + + M +
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 161 PDVWSYSIMINGFCKIKMVDEALNLL 186
P+V Y+ +I+G CK ++ AL LL
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELL 199
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G R AL + + + P+++ + ++ LC + + A F +M ++
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I G C ++E A L + ++ + PD T+ ++ L K G +EA ++ M
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Query: 121 KEG 123
+EG
Sbjct: 484 EEG 486
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 110/180 (61%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ ++ Q+ +P+VVMY TIIDSLCK+ VN A +LF +M I P V+ Y +L+
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+ A LL M + I PDVITFN L+DA KEG+ +A+ + MI+ P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+ TY SL++G+C+ V++ + +F M PDV +Y+ +INGFCK K VD+A+ +
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH AL L Q++ +P+VVMY ++++ LC DA +L M ++I P VIT+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI F G+ A L NEM+ SI P++ T+ +L++ EG V EA+ + +M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+VV Y SL++G+C K+V+ IF M+Q +T + +Y+ +I GF ++ +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 182 ALNLLKH 188
A + H
Sbjct: 371 AQEVFSH 377
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 103/180 (57%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++ +P++V + ++I+ C + +A ++ ++MV I P V+ Y T+I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G + A+ L ++M I PDV+ + +LV+ L GR ++A ++L M K KP
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V+T+N+L+D + + ++++N M +M + P++++Y+ +INGFC VDEA +
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 102/182 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A LLR + + +P+V+ +N +ID+ K+ DA L++EM+ I+P + TY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI GFC+ G ++ A + M K PDV+ + +L++ K +V +A + M +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G N +TY +L+ G+ V + N +++F+ M V P++ +Y+++++ C V +
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 182 AL 183
AL
Sbjct: 406 AL 407
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 3/185 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ S PN+ Y ++I+ C + V++A +F M TK P V+ Y
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI GFC +++ A+ + EM K + + IT+ TL+ + G+ A+ V + M+
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME---VTPDVWSYSIMINGFCKIKM 178
G PN+ TYN L+ C +V K IF M + E V P++W+Y+++++G C
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 179 VDEAL 183
+++AL
Sbjct: 441 LEKAL 445
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 3/188 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A Q+ ++ K P+VV Y ++I+ CK K V+DA +F EM K ++ ITY
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TLI GF VG+ A + + MV + + P++ T+N L+ L G+VK+A + M K
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 122 ---EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
+G PN+ TYN L+ G C ++ K +F M + E+ + +Y+I+I G CK
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 179 VDEALNLL 186
V A+NL
Sbjct: 476 VKNAVNLF 483
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL L + P+++ + +++ + K K + NL + +S + T N L+
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC Q A L +M+ PD++TF +L++ R++EA +++ M++ G KP
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV Y +++D C VN +F+ M + PDV Y+ ++NG C +A +LL
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 187 K 187
+
Sbjct: 236 R 236
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 82/147 (55%)
Query: 40 NDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTL 99
N+A +LF+ MV R P++I + L+ + + + + L + + + ++ D+ T N L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 100 VDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
++ + + A + L M+K G +P++VT+ SL++G+CL + + + N M +M +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLL 186
PDV Y+ +I+ CK V+ AL+L
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLF 200
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR---ISPTV 58
G A ++ + + PN+ YN ++ LC + V A +F +M + ++P +
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
TYN L+ G C G++E A+ + +M + ++ +IT+ ++ + K G+VK A N+
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 119 MIKEGEKPNVVTYNSLMDG 137
+ +G KPNVVTY +++ G
Sbjct: 486 LPSKGVKPNVVTYTTMISG 504
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 2 GHTRPALQLLRQIQGK---SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
G + AL + +Q + PN+ YN ++ LC + + A +F +M + + +
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
ITY +I G C G+++ AV L + K + P+V+T+ T++ L +EG EA +
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 119 MIKEG 123
M ++G
Sbjct: 521 MKEDG 525
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 107/182 (58%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ +++ +P+VV+YNTIID CK LVNDA LF M + +TYN+L+
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+ A L+ +MV++ I P+VITF ++D KEG+ EA + M + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V TYNSL++G C+ V++ K + + M PDV +Y+ +INGFCK K VDE L
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 187 KH 188
+
Sbjct: 338 RE 339
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++L ++ + P+V YN++I+ LC V++A + MVTK P V+TY
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC +++ L EM + + D IT+NT++ + GR A+ + + M
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM-- 375
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+PN+ TY+ L+ G C+ V K +F M + E+ D+ +Y+I+I+G CKI V++
Sbjct: 376 -DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVED 434
Query: 182 ALNLLK 187
A +L +
Sbjct: 435 AWDLFR 440
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+R + + PNV+ + +ID K+ ++A L+ EM + + P V TY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI G C+ G+++ A +L+ MV K PDV+T+NTL++ K RV E + M +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G + +TYN+++ GY + ++IF ++M+ P++ +YSI++ G C V++
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 182 ALNLLKH 188
AL L ++
Sbjct: 400 ALVLFEN 406
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 100/180 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL ++ ++ +P+VV +++I+ C+ V DA +L S+M P V+ YNT+I
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C +G + AV L + M + D +T+N+LV L GR +A ++ M+ P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NV+T+ +++D + + ++ ++ MT+ V PDV++Y+ +ING C VDEA +L
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 32/192 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A Q+L + K P+VV YNT+I+ CK K V++ LF EM + + ITY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 62 NTLI--------------------------------FGFCIVGQMEAAVCLLNEMVLKSI 89
NT+I +G C+ ++E A+ L M I
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 90 NPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKD 149
D+ T+N ++ + K G V++A ++ + +G KP+VV+Y +++ G+C ++ +K+
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 472
Query: 150 IFNTMTQMEVTP 161
++ M + + P
Sbjct: 473 LYRKMQEDGLLP 484
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 92/171 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++V ++ ++ + K K + +LF M I + +YN +I C + A+ +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+ +M+ PDV+T ++L++ + RV +A ++++ M + G +P+VV YN+++DG C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPIL 191
+ VN ++F+ M + V D +Y+ ++ G C +A L++ ++
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 81/145 (55%)
Query: 44 NLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDAL 103
+LF +M+ R P+++ ++ ++ + + L + M + I D+ ++N +++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 104 SKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
+ R A +V+ M+K G +P+VVT +SL++G+C V D+ + M +M PDV
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 164 WSYSIMINGFCKIKMVDEALNLLKH 188
Y+ +I+G CKI +V++A+ L
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDR 199
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 110/180 (61%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ QI G +PNVV+YNTIIDSLC+ VN A ++ M I P V+TYN+LI
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + +L++M+ I+PDVITF+ L+D KEG++ EAK MI+ P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+VTYNSL++G C+ +++ K + N + P+ +Y+ +ING+CK K VD+ + +L
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 101/175 (57%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
++L + P+V+ ++ +ID K+ + +A ++EM+ + ++P ++TYN+LI G
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
CI G ++ A +LN +V K P+ +T+NTL++ K RV + +L VM ++G +
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
TYN+L GYC + + + + M V PD+++++I+++G C + +AL
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 93/170 (54%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
+S PN+V YN++I+ LC L+++A + + +V+K P +TYNTLI G+C +++
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
+ +L M ++ D T+NTL + G+ A+ VL M+ G P++ T+N L+D
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
G C ++ K + + + + +Y+I+I G CK V++A L
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++L + K PN V YNT+I+ CK K V+D + M + TYNTL
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C G+ AA +L MV ++PD+ TFN L+D L G++ +A L + K
Sbjct: 368 GYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVV 427
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++TYN ++ G C +V +F ++ V+PDV +Y M+ G + ++ EA L
Sbjct: 428 GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELY 487
Query: 187 K 187
+
Sbjct: 488 R 488
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 100/175 (57%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L R ++ ++ + T+ID C+ ++ A + +M+ P+++T+ +L+ G
Sbjct: 99 ISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNG 158
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
FC V + A+ L++++V P+V+ +NT++D+L ++G+V A +VL M K G +P+
Sbjct: 159 FCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD 218
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
VVTYNSL+ + I + M +M ++PDV ++S +I+ + K + EA
Sbjct: 219 VVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 82/149 (55%)
Query: 40 NDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTL 99
NDA LF +M P+++ ++ L+ + + EA + L + + I+ D+ +F TL
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 100 VDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
+D + R+ A + L M+K G +P++VT+ SL++G+C V + + + + +
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLLKH 188
P+V Y+ +I+ C+ V+ AL++LKH
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKH 209
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 84/164 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL L + P++V ++ ++ ++ K +LF + IS + ++ TLI
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC ++ A+ L +M+ P ++TF +LV+ R EA +++ ++ G +P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
NVV YN+++D C +VN D+ M +M + PDV +Y+ +I
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L ++ P++ +N ++D LC + A ++ + +ITY
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G C ++E A L + LK ++PDVIT+ T++ L ++ +EA + M K
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQK 492
Query: 122 E 122
E
Sbjct: 493 E 493
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 117/188 (62%), Gaps = 1/188 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL LL +++ + +VV+YNTIID LCK K ++DA++LF++M TK I P V TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI C G+ A LL++M+ K+INPD++ FN L+DA KEG++ EA+ + M+K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 122 EGEK-PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
P+VV YN+L+ G+C K V + ++F M+Q + + +Y+ +I+GF + + D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 181 EALNLLKH 188
A + K
Sbjct: 409 NAQMVFKQ 416
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 94/169 (55%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
++ K P+VV YNT+I CK K V + +F EM + + +TY TLI GF
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
+ A + +MV ++PD++T+N L+D L G V+ A V M K K ++VTY +
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+++ C +V D+F +++ V P+V +Y+ M++GFC+ + +EA
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 100/179 (55%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L Q+Q N+ Y+ I+ C+ ++ A + +M+ P+++T N+L+ G
Sbjct: 95 ISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG 154
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
FC ++ AV L+++MV PD +TF TLV L + + EA ++ M+ +G +P+
Sbjct: 155 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VTY ++++G C E + ++ N M + ++ DV Y+ +I+G CK K +D+A +L
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMV-TKRISPTVIT 60
G A +LL + K+ P++V +N +ID+ K+ + +A L+ EMV +K P V+
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNTLI GFC ++E + + EM + + + +T+ TL+ + A+ V M+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G P+++TYN L+DG C V +F M + ++ D+ +Y+ MI CK V+
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 181 EALNLL 186
+ +L
Sbjct: 479 DGWDLF 484
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 95/180 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L ++ P++V N++++ C +++A L +MV P +T+ TL+
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + AV L+ MV+K PD++T+ +++ L K G A N+L M K +
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV YN+++DG C K ++ D+FN M + PDV++Y+ +I+ C +A LL
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+++ R++ + N V Y T+I + + ++A +F +MV+ + P ++TYN L+
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G +E A+ + M + + D++T+ T+++AL K G+V++ ++ + +G KP
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
NVVTY ++M G+C + +F M + P+ +Y+ +I +++ DEA
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA--RLRDGDEA 548
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L+ Q+ QP+ V + T++ L + ++A L MV K P ++TY +I
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+ + A+ LLN+M I DV+ +NT++D L K + +A ++ M +G KP
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 127 NVVTYNSLMDGYC---------------LVKEVNKTKDIFNTMTQMEVT----------- 160
+V TYN L+ C L K +N FN + V
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 161 ----------PDVWSYSIMINGFCKIKMVDEALNLLKH 188
PDV +Y+ +I GFCK K V+E + + +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + +Q+ P+++ YN ++D LC + V A +F M + + ++TY T+I
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G++E L + LK + P+V+T+ T++ ++G +EA + M ++G P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
N TYN+L+ + + ++ M D ++ ++ N
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++V ++ ++ ++ K + +L +M IS + TY+ I FC Q+ A+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M+ P ++T N+L++ R+ EA ++ M++ G +P+ VT+ +L+ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ + M PD+ +Y +ING CK D ALNLL
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ AL + +Q + + ++V Y T+I++LCK V D ++LF + K + P V+TY
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T++ GFC G E A L EM P+ T+NTL+ A ++G + ++ M
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Query: 122 EGEKPNVVTY----NSLMDG 137
G + T+ N L DG
Sbjct: 560 CGFAGDASTFGLVTNMLHDG 579
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ R L R G S+ + + +D ++DA LF +MV R P+++ +
Sbjct: 22 GNPRTTLCWERSFAGASSDD---CRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEF 78
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ L+ + + + + L +M I+ ++ T++ ++ + ++ A +L M+K
Sbjct: 79 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P++VT NSL++G+C +++ + + M +M PD +++ +++G + E
Sbjct: 139 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198
Query: 182 ALNLLKHPIL 191
A+ L++ ++
Sbjct: 199 AVALVERMVV 208
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 109/182 (59%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ A+ L+ + G PNVV+YNT+I+ LCK++ +N+A +F M K I +TYNTL
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G G+ A LL +MV + I+P+VI F L+D KEG + EA+N+ MI+
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
PNV TYNSL++G+C+ + K +F+ M PDV +Y+ +I GFCK K V++ +
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 185 LL 186
L
Sbjct: 346 LF 347
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 105/182 (57%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LLR + + PNV+ + +ID+ K+ + +A NL+ EM+ + + P V TY
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI GFCI G + A + + MV K PDV+T+NTL+ K RV++ + M
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G + TYN+L+ GYC ++N + +FN M V+PD+ +Y+I+++ C +++
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 182 AL 183
AL
Sbjct: 413 AL 414
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 96/171 (56%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K P+VV YNT+I CK K V D LF EM + + TYNTLI G+C G++
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A + N MV ++PD++T+N L+D L G++++A ++ + K +++TYN ++
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
G C ++ + +F ++T+ V PD +Y MI+G C+ + EA L +
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A L +++ +S PNV YN++I+ C + DA +F MV+K P V+TY
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC ++E + L EM + + D T+NTL+ + G++ A+ V M+
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P++VTYN L+D C ++ K + + + E+ D+ +Y+I+I G C+ + E
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 182 ALNLLK 187
A L +
Sbjct: 448 AWCLFR 453
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V ++++ C+ +A +L M P V+ YNT+I G C + A+
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ M K I D +T+NTL+ LS GR +A +L M+K PNV+ + +L+D +
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF- 264
Query: 140 LVKEVN--KTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
VKE N + ++++ M + V P+V++Y+ +INGFC
Sbjct: 265 -VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
P++V YN ++D LC + + A + ++ + +ITYN +I G C +++ A C
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN-SLMDGY 138
L + K + PD I + T++ L ++G +EA + M ++G P+ Y+ +L D Y
Sbjct: 451 LFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L +++ ++ + +I C+ ++ A L +M+ P+++T +L+ GFC
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+ + AV L++ M P+V+ +NT+++ L K + A V M K+G + + V
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHP 189
TYN+L+ G + M + ++ P+V ++ +I+ F K + EA NL K
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 190 I 190
I
Sbjct: 281 I 281
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 79/147 (53%)
Query: 40 NDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTL 99
+DA++LF EM+ R P+++ + ++ + + + + L ++M I+ D+ +F L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 100 VDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
+ + R+ A +L M+K G +P++VT SL++G+C + + ++M
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLL 186
P+V Y+ +ING CK + ++ AL +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVF 207
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 89/181 (49%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++ P++V + ++ + K + L+ +M IS + ++ LI
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC ++ A+ LL +M+ P ++T +L++ + R +EA +++ M G P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVV YN++++G C +++N ++F M + + D +Y+ +I+G +A LL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 187 K 187
+
Sbjct: 243 R 243
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 109/180 (60%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L QI G +PNVV Y T+I LCK++ +N A LF++M T P V+TYN L+
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C +G+ A LL +M+ + I P+VITF L+DA K G++ EAK + VMI+ P
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V TY SL++G C+ +++ + +F M + P+ Y+ +I+GFCK K V++ + +
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 100/181 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A Q+ ++ PN V+Y T+I CK K V D +F EM K + ITY LI
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C+VG+ + A + N+M + PD+ T+N L+D L G+V++A + M K
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+VTY ++ G C + +V D+F ++ + P+V +Y+ MI+GFC+ ++ EA +L
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 187 K 187
K
Sbjct: 492 K 492
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 99/180 (55%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H A++L Q+ ++PNVV YN ++ LC+ DA L +M+ +RI P VIT+
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
LI F VG++ A L N M+ S+ PDV T+ +L++ L G + EA+ + +M +
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
G PN V Y +L+ G+C K V IF M+Q V + +Y+++I G+C + D A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 97/167 (58%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V + ++++ C + DA LF +++ P V+TY TLI C + AV
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L N+M P+V+T+N LV L + GR +A +L M+K +PNV+T+ +L+D +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V ++ + K+++N M QM V PDV++Y +ING C ++DEA +
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAA 77
S P+V Y ++I+ LC L+++A +F M P + Y TLI GFC ++E
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 78 VCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
+ + EM K + + IT+ L+ GR A+ V M P++ TYN L+DG
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
C +V K IF M + E+ ++ +Y+I+I G CK+ V++A +L
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 91/181 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL L ++ P+++ + ++ + K + +LF +M I P + T N ++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C+ Q A C L +M+ PD++TF +L++ R+++A + ++ G KP
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVVTY +L+ C + +N ++FN M P+V +Y+ ++ G C+I +A LL
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 187 K 187
+
Sbjct: 247 R 247
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 5 RP--ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
RP A ++ Q+ + A P++ YN ++D LC + V A +F M + + ++TY
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
+I G C +G++E A L + K + P+VIT+ T++ + G + EA ++ M ++
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 123 GEKPNVVTY 131
G PN Y
Sbjct: 498 GFLPNESVY 506
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 81/161 (50%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y I+ + + NDA +LF+ MV R P++I + L+ + + + + L +M
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ I P + T N ++ + + A L M+K G +P++VT+ SL++GYC +
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+F+ + M P+V +Y+ +I CK + ++ A+ L
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 140 bits (352), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 108/183 (59%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R A++L +++ K +P+ YN +IDSLC +++A N+ +M + +VITYNTL
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I GFC + A + +EM + ++ + +T+NTL+D L K RV++A ++ MI EG+
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
KP+ TYNSL+ +C ++ K DI MT PD+ +Y +I+G CK V+ A
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 185 LLK 187
LL+
Sbjct: 597 LLR 599
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 112/191 (58%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + A+++L Q+ + PN V YNT+I +LCK+ V +A L + +K I P V T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N+LI G C+ A+ L EM K PD T+N L+D+L +G++ EA N+L M
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G +V+TYN+L+DG+C + + ++IF+ M V+ + +Y+ +I+G CK + V+
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 181 EALNLLKHPIL 191
+A L+ I+
Sbjct: 523 DAAQLMDQMIM 533
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 109/188 (57%), Gaps = 1/188 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQ-PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G AL ++++ + P+ +NT+++ LCK V A + M+ + P V T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN++I G C +G+++ AV +L++M+ + +P+ +T+NTL+ L KE +V+EA + V+
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G P+V T+NSL+ G CL + ++F M PD ++Y+++I+ C +D
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 181 EALNLLKH 188
EALN+LK
Sbjct: 453 EALNMLKQ 460
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL +L+Q++ +V+ YNT+ID CK +A +F EM +S +TY
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI G C ++E A L+++M+++ PD T+N+L+ + G +K+A +++ M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT--MTQMEVTPDVWSYSIMINGFCKIKMV 179
G +P++VTY +L+ G C V + + M + +TP +Y+ +I G + +
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP--HAYNPVIQGLFRKRKT 626
Query: 180 DEALNLLKH 188
EA+NL +
Sbjct: 627 TEAINLFRE 635
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
RPA+ +L + P+ + T++ ++ ++ A + +MV S + ++ N +
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 65 IFGFCIVGQMEAAVCLLNEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
+ GFC G++E A+ + EM + PD TFNTLV+ L K G VK A ++ VM++EG
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
P+V TYNS++ G C + EV + ++ + M + +P+ +Y+ +I+ CK V+EA
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 184 NLLK 187
L +
Sbjct: 386 ELAR 389
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
TR A ++ +++ N V YNT+ID LCK + V DA L +M+ + P TYN+
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
L+ FC G ++ A ++ M PD++T+ TL+ L K GRV+ A +L + +G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTM-TQMEVTPDVWSYSIMINGFC 174
YN ++ G ++ + ++F M Q E PD SY I+ G C
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+V +N +I +LC+ + A + +M + + P T+ T++ G+ G ++ A+
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI-KEGEKPNVVTYNSLMDGY 138
+ +MV + ++ N +V KEGRV++A N + M ++G P+ T+N+L++G
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
C V +I + M Q PDV++Y+ +I+G CK+ V EA+ +L I
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%)
Query: 83 EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK 142
+M + I PDV TFN L+ AL + +++ A +L M G P+ T+ ++M GY
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 143 EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+++ I M + + S +++++GFCK V++ALN ++
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A +++ + +P++V Y T+I LCK V A L + K I+ T Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDAL-SKEGRVKEAKNVLAVM 119
N +I G + A+ L EM+ ++ PD +++ + L + G ++EA + L +
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVEL 673
Query: 120 IKEGEKPNVVTYNSLMDG-YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
+++G P + L +G L E K + M + + + S M+ G KI+
Sbjct: 674 LEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVS---MVKGLLKIRK 730
Query: 179 VDEALNLL 186
+AL L
Sbjct: 731 FQDALATL 738
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 139 bits (351), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 102/167 (61%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+ +VV+ I+D LCKD +A NLF+EM K I P V+TYN +I FC G+ A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
LL M+ K INPD++TF+ L++A KE +V EA+ + M++ P +TYNS++DG+C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V+ K + ++M +PDV ++S +ING+CK K VD + +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 107/184 (58%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++ K PNV+ YN +IDS C +DA L M+ K+I+P ++T++ LI
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
F ++ A + EM+ SI P IT+N+++D K+ RV +AK +L M +G P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VVT+++L++GYC K V+ +IF M + + + +Y+ +I+GFC++ +D A +LL
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 187 KHPI 190
I
Sbjct: 209 NEMI 212
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 106/186 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A QLLR + K P++V ++ +I++ K++ V++A ++ EM+ I PT ITY
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N++I GFC +++ A +L+ M K +PDV+TF+TL++ K RV + M +
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N VTY +L+ G+C V +++ +D+ N M V PD ++ M+ G C K + +
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 182 ALNLLK 187
A +L+
Sbjct: 239 AFAILE 244
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 83/152 (54%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++ +++ S P + YN++ID CK V+DA + M +K SP V+T++TLI
Sbjct: 99 AEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN 158
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C +++ + + EM + I + +T+ TL+ + G + A+++L MI G P
Sbjct: 159 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
+ +T++ ++ G C KE+ K I + + E
Sbjct: 219 DYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 76/138 (55%)
Query: 49 MVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR 108
M I V+ ++ C G A L EM K I P+V+T+N ++D+ GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 109 VKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSI 168
+A +L MI++ P++VT+++L++ + ++V++ ++I+ M + + P +Y+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 169 MINGFCKIKMVDEALNLL 186
MI+GFCK VD+A +L
Sbjct: 121 MIDGFCKQDRVDDAKRML 138
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
M I DV+ +VD L K+G A+N+ M ++G PNV+TYN ++D +C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWMLYAKAI 200
+ + M + ++ PD+ ++S +IN F K + V EA + K +L W ++ I
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYK-EMLRWSIFPTTI 116
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 105/180 (58%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++ L ++ + P++V YNT++ +LCKD V DA + +++ +K SP +ITYNT+I
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G G+ A+ LL+EM K + PD IT+++LV LS+EG+V EA + G +P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N VT+NS+M G C ++ ++ D M P+ SY+I+I G M EAL LL
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 108/187 (57%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A+++L ++ + P+V+ Y +I++ C+D V A L EM + +P V+TY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G C G+++ A+ LN+M P+VIT N ++ ++ GR +A+ +LA M++
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+VVT+N L++ C + + DI M Q P+ SY+ +++GFCK K +D
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 182 ALNLLKH 188
A+ L+
Sbjct: 398 AIEYLER 404
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 109/188 (57%), Gaps = 3/188 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+GH A++LL +++ + P+VV YN +++ +CK+ +++A ++M + P VIT
Sbjct: 255 VGH---AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N ++ C G+ A LL +M+ K +P V+TFN L++ L ++G + A ++L M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G +PN ++YN L+ G+C K++++ + M PD+ +Y+ M+ CK V+
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 181 EALNLLKH 188
+A+ +L
Sbjct: 432 DAVEILNQ 439
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 105/180 (58%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ +L ++ QPN + YN ++ CK+K ++ A MV++ P ++TYNT++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G++E AV +LN++ K +P +IT+NT++D L+K G+ +A +L M + KP
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +TY+SL+ G +V++ F+ +M + P+ +++ ++ G CK + D A++ L
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 101/180 (56%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL + K P+VV +N +I+ LC+ L+ A ++ +M P ++YN L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC +M+ A+ L MV + PD++T+NT++ AL K+G+V++A +L + +G P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++TYN+++DG + K + + M ++ PD +YS ++ G + VDEA+
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G TR A ++L ++G A P+V+ YN +I CK +N+A ++ M +SP V+T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT++ C G+++ A+ +L+ M+ + PDVIT+ L++A ++ V A +L M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G P+VVTYN L++G C +++ N M P+V +++I++ C
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 181 EALNLL 186
+A LL
Sbjct: 327 DAEKLL 332
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+++ T+I C+ A + + P VITYN +I G+C G++ A+ +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L+ M S++PDV+T+NT++ +L G++K+A VL M++ P+V+TY L++ C
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V + + M TPDV +Y++++NG CK +DEA+ L
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+++L Q+ K P ++ YNT+ID L K A L EM K + P ITY
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++L+ G G+++ A+ +E I P+ +TFN+++ L K + A + L MI
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 122 EGEKPNVVTYNSLMDG 137
G KPN +Y L++G
Sbjct: 548 RGCKPNETSYTILIEG 563
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 24 VMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
V N + + + + + + MV P +I TLI GFC +G+ A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
+ PDVIT+N ++ K G E N L+V+ + P+VVTYN+++ C +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + ++ + M Q + PDV +Y+I+I C+ V A+ LL
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 67/122 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A++LL +++ K +P+ + Y++++ L ++ V++A F E I P +T+
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+++ G C Q + A+ L M+ + P+ ++ L++ L+ EG KEA +L +
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 122 EG 123
+G
Sbjct: 583 KG 584
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 111/184 (60%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A++ L Q++ + PN Y T++D + +N+AY + EM SP+V+TY
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G C+ G+ME A+ +L +M K ++PDV++++T++ + V EA V M++
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G KP+ +TY+SL+ G+C + + D++ M ++ + PD ++Y+ +IN +C +++
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 182 ALNL 185
AL L
Sbjct: 539 ALQL 542
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 106/185 (57%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A ++LR++ P+VV YN +I+ C + DA + +M K +SP V++Y
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+T++ GFC ++ A+ + EMV K I PD IT+++L+ ++ R KEA ++ M++
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+ TY +L++ YC+ ++ K + N M + V PDV +YS++ING K E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 182 ALNLL 186
A LL
Sbjct: 574 AKRLL 578
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 107/184 (58%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + +L ++ + + V YNT+I CK+ + A + +EM+ ++P+VITY
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI C G M A+ L++M ++ + P+ T+ TLVD S++G + EA VL M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+VVTYN+L++G+C+ ++ + M + ++PDV SYS +++GFC+ VDE
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 182 ALNL 185
AL +
Sbjct: 469 ALRV 472
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 104/186 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ AL L +++ K PNVV YNT+ID CK + ++D + L M K + P +I+Y
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G C G+M+ +L EM + + D +T+NTL+ KEG +A + A M++
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+V+TY SL+ C +N+ + + M + P+ +Y+ +++GF + ++E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 182 ALNLLK 187
A +L+
Sbjct: 399 AYRVLR 404
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 108/196 (55%), Gaps = 15/196 (7%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL++ R++ K +P+ + Y+++I C+ + +A +L+ EM+ + P TY LI
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+C+ G +E A+ L NEMV K + PDV+T++ L++ L+K+ R +EAK +L + E P
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 127 NVVTYN---------------SLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
+ VTY+ SL+ G+C+ + + +F +M PD +Y+IMI+
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 172 GFCKIKMVDEALNLLK 187
G C+ + +A L K
Sbjct: 649 GHCRAGDIRKAYTLYK 664
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + +++ PNV YN +I C ++ A LF +M TK P V+TYNTLI
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C + +++ LL M LK + P++I++N +++ L +EGR+KE VL M + G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ VTYN+L+ GYC ++ + M + +TP V +Y+ +I+ CK ++ A+ L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKL-VNDAYNLFSEMVTKRISPTVITYNTLI 65
AL ++ Q P V+ YN ++D+ + K ++ A N+F EM+ ++SP V TYN LI
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
GFC G ++ A+ L ++M K P+V+T+NTL+D K ++ + +L M +G +
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL-- 183
PN+++YN +++G C + + + M + + D +Y+ +I G+CK +AL
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 184 --NLLKHPI 190
+L+H +
Sbjct: 333 HAEMLRHGL 341
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 100/184 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ AL + ++ P+V+ Y ++I S+CK +N A +M + + P TY
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TL+ GF G M A +L EM +P V+T+N L++ G++++A VL M +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+VV+Y++++ G+C +V++ + M + + PD +YS +I GFC+ + E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 182 ALNL 185
A +L
Sbjct: 504 ACDL 507
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ALQL ++ K P+VV Y+ +I+ L K +A L ++ + P+ +TY
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 62 NTLIF---------------GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKE 106
+TLI GFC+ G M A + M+ K+ PD +N ++ +
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 107 GRVKEAKNVLAVMIKEG 123
G +++A + M+K G
Sbjct: 654 GDIRKAYTLYKEMVKSG 670
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDS---------------LCKDKLVNDAYNLFSE 48
TR A +LL ++ + + P+ V Y+T+I++ C ++ +A +F
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 49 MVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR 108
M+ K P YN +I G C G + A L EMV +T LV AL KEG+
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 109 VKEAKNVLAVMIKEGE 124
V E +V+ +++ E
Sbjct: 691 VNELNSVIVHVLRSCE 706
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 96 FNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE-VNKTKDIFNTM 154
F+ +V + S+ + +A +++ + G P V++YN+++D K ++ +++F M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 155 TQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +V+P+V++Y+I+I GFC +D AL L
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 133 bits (334), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 111/191 (58%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +L ++ +PN V +N +I + CK+ + +A +F EM K P V T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N+LI G C V +++ A+ LL +M+ + + + +T+NTL++A + G +KEA+ ++ M+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G + +TYNSL+ G C EV+K + +F M + P S +I+ING C+ MV+
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 181 EALNLLKHPIL 191
EA+ K +L
Sbjct: 617 EAVEFQKEMVL 627
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 1/172 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITYNTLIFGFCIVGQMEAAV 78
+P +V++NT+I ++DA + S+MVT I P V TYN+LI+G+ G + A+
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+L++M K P+V ++ LVD K G++ EA NVL M +G KPN V +N L+ +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
C + + +IF M + PDV++++ +I+G C++ + AL LL+ I
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Query: 3 HTRP-ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
H P A+++ R++ K +P+V +N++I LC+ + A L +M+++ + +TY
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI F G+++ A L+NEMV + D IT+N+L+ L + G V +A+++ M++
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+ ++ N L++G C V + + M TPD+ +++ +ING C+ +++
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 182 ALNLLK 187
L + +
Sbjct: 653 GLTMFR 658
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+V YN++I K+ LV A + +M K P V +Y L+ GFC +G+++ A +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
LNEM + P+ + FN L+ A KE R+ EA + M ++G KP+V T+NSL+ G C
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V E+ + M V + +Y+ +IN F + + EA L+
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 90/169 (53%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAA 77
S +P YN +++ L A N+F +M++++I PT+ T+ ++ FC V ++++A
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 78 VCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
+ LL +M P+ + + TL+ +LSK RV EA +L M G P+ T+N ++ G
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
C +N+ + N M PD +Y ++NG CKI VD A +L
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ AL LLR + + N V YNT+I++ + + +A L +EMV + ITYN+L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G C G+++ A L +M+ P I+ N L++ L + G V+EA M+ G
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
P++VT+NSL++G C + +F + + PD +++ +++ CK V +A
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 185 LLKHPI 190
LL I
Sbjct: 691 LLDEGI 696
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 96/180 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A +L+ ++ + + + + YN++I LC+ V+ A +LF +M+ +P+ I+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G C G +E AV EMVL+ PD++TFN+L++ L + GR+++ + +
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
EG P+ VT+N+LM C V + + + P+ ++SI++ + +D
Sbjct: 663 EGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P + + ++ + C ++ A +L +M P + Y TLI ++ A+ L
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L EM L PD TFN ++ L K R+ EA ++ M+ G P+ +TY LM+G C
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ V+ KD+F + + P++ ++ +I+GF +D+A
Sbjct: 335 IGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDA 372
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 88 SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
S P ++N +++ L K A NV M+ P + T+ +M +C V E++
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 148 KDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPIL 191
+ MT+ P+ Y +I+ K V+EAL LL+ L
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL 280
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 101/166 (60%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ V+Y T+ID CK + A F EM ++ I+P V+TY +I GFC +G M A L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+EM K + PD +TF L++ K G +K+A V MI+ G PNVVTY +L+DG C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++ ++ + M ++ + P++++Y+ ++NG CK ++EA+ L+
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 6/200 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +L ++ K +P+ V + +I+ CK + DA+ + + M+ SP V+T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI G C G +++A LL+EM + P++ T+N++V+ L K G ++EA ++
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G + VTY +LMD YC E++K ++I M + P + ++++++NGFC M++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 181 EALNLLKHPILYWMLYAKAI 200
+ LL WML AK I
Sbjct: 579 DGEKLLN-----WML-AKGI 592
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 97/173 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH + A ++ + PNVV Y T+ID LCK+ ++ A L EM + P + TY
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+++ G C G +E AV L+ E +N D +T+ TL+DA K G + +A+ +L M+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
+G +P +VT+N LM+G+CL + + + N M + P+ +++ ++ +C
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G +L+ ++ K +PN +Y +II LC+ + +A FSEM+ + I P +
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI GFC G + AA EM + I PDV+T+ ++ + G + EA + M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G +P+ VT+ L++GYC + + N M Q +P+V +Y+ +I+G CK +D
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 181 EALNLL 186
A LL
Sbjct: 474 SANELL 479
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL ++ QPN+ YN+I++ LCK + +A L E ++ +TY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TL+ +C G+M+ A +L EM+ K + P ++TFN L++ G +++ + +L M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN T+NSL+ YC+ + I+ M V PD +Y ++ G CK + + E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 182 ALNLLKH 188
A L +
Sbjct: 650 AWFLFQE 656
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A++L+ + + + V Y T++D+ CK ++ A + EM+ K + PT++T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ GFC+ G +E LLN M+ K I P+ TFN+LV +K A + M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+ TY +L+ G+C + + + +F M + V +YS++I GF K K E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 182 A 182
A
Sbjct: 685 A 685
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 100/183 (54%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
T A+ + R+ NV YN +I +C+ + +A++L M K +P VI+Y+T
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
++ G+C G+++ L+ M K + P+ + +++ L + ++ EA+ + MI++G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
P+ V Y +L+DG+C ++ F M ++TPDV +Y+ +I+GFC+I + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 184 NLL 186
L
Sbjct: 407 KLF 409
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 97/190 (51%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + A LL ++ K P+V+ Y+T+++ C+ ++ + L M K + P
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y ++I C + ++ A +EM+ + I PD + + TL+D K G ++ A M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
P+V+TY +++ G+C + ++ + +F+ M + PD +++ +ING+CK +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 181 EALNLLKHPI 190
+A + H I
Sbjct: 439 DAFRVHNHMI 448
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L+++ GK QP +V +N +++ C ++ D L + M+ K I+P T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+L+ +CI ++AA + +M + + PD T+ LV K +KEA + M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+G +V TY+ L+ G+ K+ + +++F+ M + + D
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 101/166 (60%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ V+Y T+ID CK + A F EM ++ I+P V+TY +I GFC +G M A L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+EM K + PD +TF L++ K G +K+A V MI+ G PNVVTY +L+DG C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++ ++ + M ++ + P++++Y+ ++NG CK ++EA+ L+
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 6/200 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +L ++ K +P+ V + +I+ CK + DA+ + + M+ SP V+T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI G C G +++A LL+EM + P++ T+N++V+ L K G ++EA ++
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G + VTY +LMD YC E++K ++I M + P + ++++++NGFC M++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 181 EALNLLKHPILYWMLYAKAI 200
+ LL WML AK I
Sbjct: 579 DGEKLLN-----WML-AKGI 592
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 97/173 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH + A ++ + PNVV Y T+ID LCK+ ++ A L EM + P + TY
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+++ G C G +E AV L+ E +N D +T+ TL+DA K G + +A+ +L M+
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
+G +P +VT+N LM+G+CL + + + N M + P+ +++ ++ +C
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G +L+ ++ K +PN +Y +II LC+ + +A FSEM+ + I P +
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI GFC G + AA EM + I PDV+T+ ++ + G + EA + M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G +P+ VT+ L++GYC + + N M Q +P+V +Y+ +I+G CK +D
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 181 EALNLL 186
A LL
Sbjct: 474 SANELL 479
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL ++ QPN+ YN+I++ LCK + +A L E ++ +TY
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TL+ +C G+M+ A +L EM+ K + P ++TFN L++ G +++ + +L M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN T+NSL+ YC+ + I+ M V PD +Y ++ G CK + + E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 182 ALNLLKH 188
A L +
Sbjct: 650 AWFLFQE 656
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A++L+ + + + V Y T++D+ CK ++ A + EM+ K + PT++T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ GFC+ G +E LLN M+ K I P+ TFN+LV +K A + M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+ TY +L+ G+C + + + +F M + V +YS++I GF K K E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 182 A 182
A
Sbjct: 685 A 685
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 100/183 (54%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
T A+ + R+ NV YN +I +C+ + +A++L M K +P VI+Y+T
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
++ G+C G+++ L+ M K + P+ + +++ L + ++ EA+ + MI++G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
P+ V Y +L+DG+C ++ F M ++TPDV +Y+ +I+GFC+I + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 184 NLL 186
L
Sbjct: 407 KLF 409
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 97/190 (51%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + A LL ++ K P+V+ Y+T+++ C+ ++ + L M K + P
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y ++I C + ++ A +EM+ + I PD + + TL+D K G ++ A M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
P+V+TY +++ G+C + ++ + +F+ M + PD +++ +ING+CK +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 181 EALNLLKHPI 190
+A + H I
Sbjct: 439 DAFRVHNHMI 448
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 85/161 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L+++ GK QP +V +N +++ C ++ D L + M+ K I+P T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+L+ +CI ++AA + +M + + PD T+ LV K +KEA + M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+G +V TY+ L+ G+ K+ + +++F+ M + + D
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 103/186 (55%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A L Q+ K QP+ Y +I +LC L++ A+NLF EM+ + P V T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI G C G++E A + +MV I P VIT+N L++ K+GRV A +L VM
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K KPNV T+N LM+G C V + K + M ++PD+ SY+++I+G C+ ++
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 181 EALNLL 186
A LL
Sbjct: 459 TAYKLL 464
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++ + +PNV Y +ID LC+D + +A + +MV RI P+VITYN LI
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C G++ A LL M ++ P+V TFN L++ L + G+ +A ++L M+ G P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++V+YN L+DG C +N + ++M ++ PD +++ +IN FCK D A L
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 96/171 (56%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAA 77
+ PN V Y+ +I LC+ + +A+ L +M K P+ TY LI C G ++ A
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 78 VCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
L +EM+ + P+V T+ L+D L ++G+++EA V M+K+ P+V+TYN+L++G
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
YC V ++ M + P+V +++ ++ G C++ +A++LLK
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 105/221 (47%), Gaps = 35/221 (15%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+ LL+++ P++V YN +ID LC++ +N AY L S M I P +T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAK------- 113
+ +I FC G+ + A L M+ K I+ D +T TL+D + K G+ ++A
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 114 -----------NVLAVMIKEGEK-----------------PNVVTYNSLMDGYCLVKEVN 145
NV+ M+ +G K P+VVTY +L+DG ++
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ I M P+V+ Y+I+ING C+ V+EA LL
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G PA +LL ++ ++ +PNV +N +++ LC+ A +L M+ +SP +++Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G C G M A LL+ M I PD +TF +++A K+G+ A L +M++
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKD---IFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
+G + VT +L+DG C +V KT+D I T+ +M + S +++++ K
Sbjct: 505 KGISLDEVTGTTLIDGVC---KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 179 VDEALNLL 186
V E L +L
Sbjct: 562 VKEELAML 569
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 99/186 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + R++ P+V+ YN +I+ CKD V A+ L + M + P V T+
Sbjct: 350 GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G C VG+ AV LL M+ ++PD++++N L+D L +EG + A +L+ M
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+P+ +T+ ++++ +C + + M + ++ D + + +I+G CK+ +
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRD 529
Query: 182 ALNLLK 187
AL +L+
Sbjct: 530 ALFILE 535
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVIT 60
G+T A + +I + + +++ C+ + DA +F M + +P ++
Sbjct: 209 GYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVS 268
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+ LI G C VG++E A L ++M K P T+ L+ AL G + +A N+ MI
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G KPNV TY L+DG C ++ + + M + + P V +Y+ +ING+CK V
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 181 EALNLL 186
A LL
Sbjct: 389 PAFELL 394
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH A +LL + +P+ + + II++ CK + A M+ K IS +T
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMV------------------------------LKSIN- 90
TLI G C VG+ A+ +L +V L IN
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 91 ----PDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
P V+T+ TLVD L + G + + +L +M G PNV Y +++G C V +
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + + M V+P+ +Y++M+ G+ +D AL ++
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G TR AL +L + N I+D L K V + + ++ + P+V+T
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TL+ G G + + +L M L P+V + +++ L + GRV+EA+ +L+ M
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
G PN VTY ++ GY ++++ + M + + YS ++ GF
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ L +L +I P+VV Y T++D L + + ++ + M P V Y +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G C G++E A LL+ M ++P+ +T+ +V G++ A + M++ G
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Query: 125 KPNVVTYNSLMDGYCLVK------EVNKTKDIFNTMTQMEVTPDVWSYSIMING------ 172
+ N Y+SL+ G+ L + E + DI T E ++ S + G
Sbjct: 683 ELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLC 742
Query: 173 ------FCKIKMVDEALNLLKHPILYWMLYAKAI 200
CK DE+ +L+++ + + KA+
Sbjct: 743 IFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM 776
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 3/181 (1%)
Query: 11 LRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCI 70
LR++ G + N Y++++ SL K L AY + M +I Y T++ C
Sbjct: 150 LREVFG--FRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK 207
Query: 71 VGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE-KPNVV 129
G EAA +++++ D +L+ + +++A V VM KE PN V
Sbjct: 208 NGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSV 267
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHP 189
+Y+ L+ G C V + + + + M + P +Y+++I C ++D+A NL
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 190 I 190
I
Sbjct: 328 I 328
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 1/187 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI-SPTVI 59
+G AL+LL + G +P++V YNT+I CK +N A +F ++ + + SP V+
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TY ++I G+C G+M A LL++M+ I P +TFN LVD +K G + A+ + M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
I G P+VVT+ SL+DGYC V +V++ ++ M + P+ ++YSI+IN C +
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 180 DEALNLL 186
+A LL
Sbjct: 399 LKARELL 405
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A LL + P V +N ++D K + A + +M++ P V+T+
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI G+C VGQ+ L EM + + P+ T++ L++AL E R+ +A+ +L +
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ P YN ++DG+C +VN+ I M + + PD +++I+I G C + E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 182 ALNLL 186
A+++
Sbjct: 471 AVSIF 475
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 13 QIQGK----SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+I+GK P+VV + ++ID C+ V+ + L+ EM + + P TY+ LI
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C ++ A LL ++ K I P +N ++D K G+V EA ++ M K+ KP+
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+T+ L+ G+C+ + + IF+ M + +PD + S +++ K M EA +L
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL Q+ K P MYN +ID CK VN+A + EM K+ P IT+ LI
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C+ G+M AV + ++MV +PD IT ++L+ L K G KEA + L + ++G+
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSN 519
Query: 127 NVV 129
NVV
Sbjct: 520 NVV 522
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 36/196 (18%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL---- 81
YN + SLCK L + A +F M + +SP L+ F G++ A LL
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 82 ------------------------------NEMVLKSINPDVITFNTLVDALSKEGRVKE 111
+ +S N D TFN L+ L G+ ++
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEK 224
Query: 112 AKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV-TPDVWSYSIMI 170
A +L VM G +P++VTYN+L+ G+C E+NK ++F + V +PDV +Y+ MI
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 171 NGFCKIKMVDEALNLL 186
+G+CK + EA +LL
Sbjct: 285 SGYCKAGKMREASSLL 300
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G +L ++ + PN Y+ +I++LC + + A L ++ +K I P
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I GFC G++ A ++ EM K PD ITF L+ +GR+ EA ++ M+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 121 KEGEKPNVVTYNSLMDGYCLVK 142
G P+ +T +SL+ CL+K
Sbjct: 480 AIGCSPDKITVSSLLS--CLLK 499
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 1/187 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI-SPTVI 59
+G AL+LL + G +P++V YNT+I CK +N A +F ++ + + SP V+
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TY ++I G+C G+M A LL++M+ I P +TFN LVD +K G + A+ + M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
I G P+VVT+ SL+DGYC V +V++ ++ M + P+ ++YSI+IN C +
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 180 DEALNLL 186
+A LL
Sbjct: 399 LKARELL 405
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A LL + P V +N ++D K + A + +M++ P V+T+
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI G+C VGQ+ L EM + + P+ T++ L++AL E R+ +A+ +L +
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ P YN ++DG+C +VN+ I M + + PD +++I+I G C + E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 182 ALNLL 186
A+++
Sbjct: 471 AVSIF 475
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 13 QIQGK----SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+I+GK P+VV + ++ID C+ V+ + L+ EM + + P TY+ LI
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C ++ A LL ++ K I P +N ++D K G+V EA ++ M K+ KP+
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+T+ L+ G+C+ + + IF+ M + +PD + S +++ K M EA +L
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL Q+ K P MYN +ID CK VN+A + EM K+ P IT+ LI
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C+ G+M AV + ++MV +PD IT ++L+ L K G KEA + L + ++G+
Sbjct: 461 GHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSN 519
Query: 127 NVV 129
NVV
Sbjct: 520 NVV 522
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 36/196 (18%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL---- 81
YN + SLCK L + A +F M + +SP L+ F G++ A LL
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 82 ------------------------------NEMVLKSINPDVITFNTLVDALSKEGRVKE 111
+ +S N D TFN L+ L G+ ++
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEK 224
Query: 112 AKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV-TPDVWSYSIMI 170
A +L VM G +P++VTYN+L+ G+C E+NK ++F + V +PDV +Y+ MI
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 171 NGFCKIKMVDEALNLL 186
+G+CK + EA +LL
Sbjct: 285 SGYCKAGKMREASSLL 300
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G +L ++ + PN Y+ +I++LC + + A L ++ +K I P
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I GFC G++ A ++ EM K PD ITF L+ +GR+ EA ++ M+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 121 KEGEKPNVVTYNSLMDGYCLVK 142
G P+ +T +SL+ CL+K
Sbjct: 480 AIGCSPDKITVSSLLS--CLLK 499
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 107/190 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L++ ++ + P+ Y T+I LC+ +++A LF+EMV K +PTV+TY
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI G C ++ A+ L EM K I P+V T+++L+D L K+GR +A + +M+
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +PN+VTY +L+ G C +++ + ++ + M + PD Y +I+GFC I E
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Query: 182 ALNLLKHPIL 191
A N L IL
Sbjct: 351 AANFLDEMIL 360
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCK-DKLVNDAYNLFSEMVTKRISPTVITYNTLI 65
A + + ++ P V N +I +LC+ D V+ +F EM + P TY TLI
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
G C G+++ A L EMV K P V+T+ +L++ L V EA L M +G +
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
PNV TY+SLMDG C + ++F M P++ +Y+ +I G CK + + EA+ L
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 186 LKHPILYWM-----LYAKAI 200
L L + LY K I
Sbjct: 320 LDRMNLQGLKPDAGLYGKVI 339
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 91/169 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L ++ K P VV Y ++I+ LC K V++A EM +K I P V TY
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTY 265
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++L+ G C G+ A+ L M+ + P+++T+ TL+ L KE +++EA +L M
Sbjct: 266 SSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL 325
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
+G KP+ Y ++ G+C + + + + + M +TP+ +++I +
Sbjct: 326 QGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHV 374
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL Q+ K PNV+ YN +I+ CK ++ DA ++ M ++++SP TYN LI
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C + A+ +LN+M+ + + PDV+T+N+L+D + G A +L++M G P
Sbjct: 437 GYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ TY S++D C K V + D+F+++ Q V P+V Y+ +I+G+CK VDEA
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++ K PNVVMY +ID CK V++A+ + +M++K P +T+N LI
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+++ A L +MV + P V T L+ L K+G A + M+ G KP
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ TY + + YC + +D+ M + V+PD+++YS +I G+ + + A ++L
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 187 KH 188
K
Sbjct: 696 KR 697
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 101/181 (55%), Gaps = 1/181 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ ++ ++ + PN YN +I CK V+ A + ++M+ +++ P V+TY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI G C G ++A LL+ M + + PD T+ +++D+L K RV+EA ++ + +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PNVV Y +L+DGYC +V++ + M P+ +++ +I+G C + E
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 182 A 182
A
Sbjct: 586 A 586
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 95/169 (56%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++ ++ K + N V Y +I LC + +++A +LF +M PTV TY LI
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C + A+ L+ EM I P++ T+ L+D+L + + ++A+ +L M+++G P
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
NV+TYN+L++GYC + D+ M +++P+ +Y+ +I G+CK
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 100/187 (53%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ A Q + +I P+ Y ++I C+ K ++ A+ +F+EM K +
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI G C+ +++ A+ L +M P V T+ L+ +L R EA N++ M
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G KPN+ TY L+D C + K +++ M + + P+V +Y+ +ING+CK M++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 181 EALNLLK 187
+A+++++
Sbjct: 411 DAVDVVE 417
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 91/162 (56%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
YNT+++SL + LV++ ++ EM+ ++ P + TYN ++ G+C +G +E A ++++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
++PD T+ +L+ + + A V M +G + N V Y L+ G C+ + ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ D+F M E P V +Y+++I C + EALNL+K
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 19/199 (9%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKL------------------VNDA 42
+G T A +L++++ +P+ + ++I L + K +
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTV 744
Query: 43 YNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL-KSINPDVITFNTLVD 101
L +MV ++P +Y LI G C VG + A + + M + I+P + FN L+
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 102 ALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
K + EA V+ MI G P + + L+ G E + +F + Q
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 162 DVWSYSIMINGFCKIKMVD 180
D ++ I+I+G K +V+
Sbjct: 865 DELAWKIIIDGVGKQGLVE 883
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVITYNTLIF 66
++LL ++ S PN Y +I +C+ + A +F M + ISP+ + +N L+
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C + + A ++++M+ P + + L+ L K+G + +V +++ G
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
+ + + ++DG V ++FN M + +YS++I G
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 1 MGHTRPALQLLRQIQ-GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G+ R A ++ +Q + P+ +++N ++ CK K N+A + +M+ P +
Sbjct: 773 VGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE 832
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+ LI G G+ E + ++ D + + ++D + K+G V+ + VM
Sbjct: 833 SCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
Query: 120 IKEGEKPNVVTYNSLMDG 137
K G K + TY+ L++G
Sbjct: 893 EKNGCKFSSQTYSLLIEG 910
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 107/187 (57%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T AL L + GK +PNV++YNT+I L ++ +A L +EM K + P V T+
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G C +G + A L+ M+ K PD+ TFN L+ S + +++ A +L VM+
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+V TYNSL++G C + + + TM + P++++++I++ C+ + +DE
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 182 ALNLLKH 188
AL LL+
Sbjct: 550 ALGLLEE 556
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Query: 8 LQLLRQIQGKSA----QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
+QL +I G + P+ Y ++ID LC + N A LF+E + K I P VI YNT
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
LI G G + A L NEM K + P+V TFN LV+ L K G V +A ++ VMI +G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
P++ T+N L+ GY ++ +I + M V PDV++Y+ ++NG CK ++ +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 184 NLLK 187
K
Sbjct: 517 ETYK 520
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 100/181 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A QL ++ K P V +N +++ LCK V+DA L M++K P + T+N LI
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+ +ME A+ +L+ M+ ++PDV T+N+L++ L K + ++ M+++G P
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+ T+N L++ C +++++ + M V PD ++ +I+GFCK +D A L
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 187 K 187
+
Sbjct: 590 R 590
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++++ + + +P+V+ YN +I LCK+ +A +MV + + P TY
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI G+C G ++ A ++ + V PD T+ +L+D L EG A + +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G KPNV+ YN+L+ G + + + N M++ + P+V +++I++NG CK+ V +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 182 ALNLLK 187
A L+K
Sbjct: 445 ADGLVK 450
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + +LL ++ + PN+ YN I LC+ ++ A + ++ + P VITY
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI+G C + + A L +MV + + PD T+NTL+ K G V+ A+ ++ +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+ TY SL+DG C E N+ +FN + P+V Y+ +I G M+ E
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 182 ALNL 185
A L
Sbjct: 410 AAQL 413
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 102/190 (53%), Gaps = 2/190 (1%)
Query: 4 TRP--ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
+RP AL+LL + + + NVV Y T++ ++ + Y LF +M+ +S + T+
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ C G ++ LL++++ + + P++ T+N + L + G + A ++ +I+
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G KP+V+TYN+L+ G C + + + M + PD ++Y+ +I G+CK MV
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 182 ALNLLKHPIL 191
A ++ +
Sbjct: 340 AERIVGDAVF 349
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 3/182 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL++L + P+V YN++++ LCK D + MV K +P + T+N L+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK- 125
C +++ A+ LL EM KS+NPD +TF TL+D K G + A + M +E K
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKV 598
Query: 126 -PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
+ TYN ++ + V + +F M + PD ++Y +M++GFCK V+
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 185 LL 186
L
Sbjct: 659 FL 660
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%)
Query: 11 LRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCI 70
L ++ + +P+ YNT+I CK +V A + + V P TY +LI G C
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 71 VGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
G+ A+ L NE + K I P+VI +NTL+ LS +G + EA + M ++G P V T
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 131 YNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+N L++G C + V+ + M PD+++++I+I+G+ ++ AL +L
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL 484
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITYNTLI 65
AL LL +++ KS P+ V + T+ID CK+ ++ AY LF +M ++S + TYN +I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
F + A L EMV + + PD T+ +VD K G V L M++ G
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
P++ T +++ C+ V + I + M Q + P+
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K PN+ +N +++SLC+ + +++A L EM K ++P +T+ TLI GFC G ++
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 77 AVCLLNEMV-LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
A L +M ++ T+N ++ A +++ V A+ + M+ P+ TY ++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 136 DGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWML 195
DG+C VN M + P + + +IN C V EA ++ H ++ L
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII-HRMVQKGL 703
Query: 196 YAKAI 200
+A+
Sbjct: 704 VPEAV 708
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A+ + ++ +P V YN I+ L + A+ ++ M + I+P V ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ FC + AA+ LLN M + +V+ + T+V +E E + M+
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G + T+N L+ C +V + + + + + + V P++++Y++ I G C+ +D
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 182 ALNLL 186
A+ ++
Sbjct: 270 AVRMV 274
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 104 SKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
++G+V+EA NV M +P V +YN++M ++ ++ M +TPDV
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 164 WSYSIMINGFCKIKMVDEALNLLKH 188
+S++I + FCK AL LL +
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNN 171
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 103/180 (57%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
L+L +++ P+V +YN +ID LCK K +NDA LF EM+ +R+ P++ITYNTLI
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C G E + + M I P +ITFNTL+ L K G V++A+NVL M G P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ T++ L DGY ++ ++ T V + ++ SI++N CK +++A +L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 97/164 (59%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+L++++ PNVV Y T+I+ LCK + +A + +M + +SP V YN LI G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C G++E A EM+ K I +++T+NTL+D LS G++ EA+++L + ++G KP+
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
V TYNSL+ GY V + ++ M + + P + +Y ++I+
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L + K PN V+YNT+ID C+ + A M + + P + Y
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI FC +G+ME A +N+M LK ++P V T+N L+ ++ + ++L M
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PNVV+Y +L++ C ++ + + + M V+P V Y+++I+G C +++
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 182 ALNLLKH 188
A K
Sbjct: 548 AFRFSKE 554
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 35/211 (16%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A QL ++ + P+++ YNT+ID CK ++ + M I P++IT+NTL+
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD------------------------- 101
G G +E A +L EM PD TF+ L D
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 102 ----------ALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
AL KEG++++A+ +L + +G PN V YN+++DGYC ++ +
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
M + + PD +Y+ +I FC++ ++ A
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+ MY I + K V LF+ M RI P+V YN LI G C +M A
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L +EM+ + + P +IT+NTL+D K G +++ V M + +P+++T+N+L+ G
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
V +++ M + PD +++SI+ +G+ + + AL +
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 96/173 (55%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A + + +++ K P+V YN +I + + +++ EM P V++
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI C ++ A + +M + ++P V +N L+D +G++++A M+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
K+G + N+VTYN+L+DG + ++++ +D+ +++ + PDV++Y+ +I+G+
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 35/222 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + ++ +++ +P+++ +NT++ L K +V DA N+ EM P T+
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322
Query: 62 NTLIFGF-----------------------------------CIVGQMEAAVCLLNEMVL 86
+ L G+ C G++E A +L +
Sbjct: 323 SILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA 382
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
K + P+ + +NT++D ++G + A+ + M K+G KP+ + YN L+ +C + E+
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ N M V+P V +Y+I+I G+ + D+ ++LK
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 31/207 (14%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + +++ K + N+V YNT+ID L +++A +L E+ K + P V TY
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKE--------------- 106
N+LI G+ G ++ + L EM I P + T++ L+ +KE
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK 662
Query: 107 ----------------GRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDI 150
G +++A N+ MI++ + TYNSL+ G V ++ + + +
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 151 FNTMTQMEVTPDVWSYSIMINGFCKIK 177
+ M E+ P+ +Y+I++ G C++K
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVK 749
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N + ++++LCK+ + A + + K + P + YNT+I G+C G + A +
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
M + + PD + +N L+ + G ++ A+ + M +G P+V TYN L+ GY
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
E +K DI M P+V SY +IN CK + EA
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++ + P+ ++D L K K N+F ++ P+ Y I
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQ 187
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ + + L N M I P V +N L+D L K R+ +A+ + M+ P
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP 247
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++TYN+L+DGYC K+ + M + P + +++ ++ G K MV++A N+L
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 187 KH 188
K
Sbjct: 308 KE 309
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + + L +++ +P + Y+ +I SLC + + LF EM K P ++ Y
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLK---PDLLVY 668
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ + + G ME A L +M+ KSI D T+N+L+ K G++ E ++++ M
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
Query: 122 EGEKPNVVTYNSLMDGYCLVKE 143
+P TYN ++ G+C VK+
Sbjct: 729 REMEPEADTYNIIVKGHCEVKD 750
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%)
Query: 33 LCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPD 92
L + K++++A +LF + + I P+ + L+ Q + + ++ P
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 93 VITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFN 152
+ + A K V + + M + P+V YN L+DG C K +N + +F+
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 153 TMTQMEVTPDVWSYSIMINGFCK 175
M + P + +Y+ +I+G+CK
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCK 261
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L +Q+ KS + YN++I K + + +L EM + + P TY
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
N ++ G C V +A EM K DV N LV L +E R KEA+ V++ M
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 110/186 (59%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T+ A Q+ +++ + N+V YNT+I LC++ +N+A + +M + I+P +ITY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC VG++ A+ L ++ + ++P ++T+N LV ++G A ++ M +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G KP+ VTY L+D + + K + +M ++ + PDV +YS++I+GFC ++E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 182 ALNLLK 187
A L K
Sbjct: 462 ASRLFK 467
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 101/182 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +++ Q++ PN++ YNT+ID C + A +L ++ ++ +SP+++TYN L+
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC G A ++ EM + I P +T+ L+D ++ +++A + M + G P
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V TY+ L+ G+C+ ++N+ +F +M + P+ Y+ MI G+CK AL LL
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 187 KH 188
K
Sbjct: 502 KE 503
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 35/222 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM------------ 49
G + LL ++ PNVV+Y T+ID CK + A +LF EM
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 50 -----------VTKR------------ISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
V K+ + P + TYN ++ C G+ + A + +EM
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ ++ +++T+NTL+ L +E ++ EA V+ M +G PN++TYN+L+DG+C V ++ K
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + ++P + +Y+I+++GFC+ A ++K
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G AL L R ++ + P++V YN ++ C+ + A + EM + I P+ +T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI F ME A+ L M + PDV T++ L+ +G++ EA + M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++ +PN V YN+++ GYC + + M + E+ P+V SY MI CK +
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 181 EALNLLKHPI 190
EA L++ I
Sbjct: 531 EAERLVEKMI 540
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 35/201 (17%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+V + +I C+ + +++L E+ SP V+ Y TLI G C G++E A L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 82 NEM-------------VL----------------------KSINPDVITFNTLVDALSKE 106
EM VL + P++ T+N +++ L K+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 107 GRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSY 166
GR K+A V M + G N+VTYN+L+ G C ++N+ + + M + P++ +Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 167 SIMINGFCKIKMVDEALNLLK 187
+ +I+GFC + + +AL+L +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCR 362
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A +++++++ + +P+ V Y +ID+ + + A L M + P V TY
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI GFCI GQM A L MV K+ P+ + +NT++ KEG A +L M +
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
+ PNV +Y +++ C ++ + + + M + P
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 110/182 (60%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ A+ + Q++ + +VV+ +ID+LCK++LV A + M + ISP V+TY++L
Sbjct: 30 KDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSL 89
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G C G++ A L+EM K INP+VITF+ L+DA +K G++ + +V +MI+
Sbjct: 90 ITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI 149
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
PNV TY+SL+ G C+ V++ + + M TP+V +YS + NGF K VD+ +
Sbjct: 150 DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIK 209
Query: 185 LL 186
LL
Sbjct: 210 LL 211
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 105/183 (57%)
Query: 6 PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLI 65
PAL++L++++ + PNVV Y+++I LCK + DA EM +K+I+P VIT++ LI
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
+ G++ + M+ SI+P+V T+++L+ L RV EA +L +MI +G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
PNVVTY++L +G+ V+ + + M Q V + S + +I G+ + +D AL +
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 186 LKH 188
+
Sbjct: 246 FGY 248
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 93/167 (55%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V +++++ C + DA + +M I V+ LI C + A+
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+L M + I+P+V+T+++L+ L K GR+ +A+ L M + PNV+T+++L+D Y
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++K ++ M QM + P+V++YS +I G C VDEA+ +L
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML 176
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 3 HTR--PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H R A+++L + K PNVV Y+T+ + K V+D L +M + ++ ++
Sbjct: 166 HNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 225
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
NTLI G+ G+++ A+ + M + P++ ++N ++ L G V++A + M
Sbjct: 226 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 285
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K +++TY ++ G C V + D+F + V PD +Y+IMI + M
Sbjct: 286 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRT 345
Query: 181 EA 182
EA
Sbjct: 346 EA 347
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
M+K G +P++VT +SL++G+CL + + M +M + DV +I+I+ CK ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 179 VDEALNLLKH 188
V AL +LK
Sbjct: 64 VVPALEVLKR 73
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG---Q 73
+ QPNV +N +I++LCK +N A ++ +M SP V++YNTLI G+C +G +
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
M A +L EMV ++P++ TFN L+D K+ + + V M+ + KPNV++YNS
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
L++G C ++++ + + M V P++ +Y+ +INGFCK M+ EAL++
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + ++ QPN++ YN +I+ CK+ ++ +A ++F + + PT Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI +C +G+++ L EM + I PDV T+N L+ L + G ++ AK + +
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P++VT++ LM+GYC E K + M++M + P +Y+I++ G+CK +
Sbjct: 465 KG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 182 ALNL 185
A N+
Sbjct: 524 ATNM 527
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK---DKLVNDAYNLFSEMVTKRISPTV 58
G A ++ ++ PNVV YNT+ID CK + + A + EMV +SP +
Sbjct: 237 GKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
T+N LI GF + ++ + EM+ + + P+VI++N+L++ L G++ EA ++
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
M+ G +PN++TYN+L++G+C + + D+F ++ P Y+++I+ +CK+
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 179 VDEALNL 185
+D+ L
Sbjct: 417 IDDGFAL 423
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 99/185 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+++ PN+ +N +ID KD + + +F EM+ + + P VI+Y
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI G C G++ A+ + ++MV + P++IT+N L++ K +KEA ++ +
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P YN L+D YC + +++ + M + + PDV +Y+ +I G C+ ++
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 182 ALNLL 186
A L
Sbjct: 455 AKKLF 459
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Query: 32 SLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINP 91
+L K+ D ++ EM+ ++I P V T+N +I C G+M A ++ +M + +P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 92 DVITFNTLVDA---LSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTK 148
+V+++NTL+D L G++ +A VL M++ PN+ T+N L+DG+ + +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 149 DIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+F M +V P+V SY+ +ING C + EA+++
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 7/184 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G L +++ + P+V YN +I LC++ + A LF ++ +K + P ++T
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVT 472
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
++ L+ G+C G+ A LL EM + P +T+N ++ KEG +K A N+ M
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME 532
Query: 121 KEGE-KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
KE + NV +YN L+ GY ++ + N M + + P+ +Y I+ K +MV
Sbjct: 533 KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV-----KEEMV 587
Query: 180 DEAL 183
D+
Sbjct: 588 DQGF 591
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVT-KRISPTVIT 60
G +R A LL+++ +P + YN ++ CK+ + A N+ ++M +R+ V +
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
YN L+ G+ G++E A LLNEM+ K + P+ IT+ + + + +G V + + L
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHL 599
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
L+ AL KE R + + V MI+ +PNV T+N +++ C ++NK +D+ M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 159 VTPDVWSYSIMINGFCKI 176
+P+V SY+ +I+G+CK+
Sbjct: 254 CSPNVVSYNTLIDGYCKL 271
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ R A L ++I PNVV++ T++D CK + + A +LF MV + P + Y
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G C G M AV LL+EM +++PDV T+ L++ L E +V EA + M
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
E P+ TYNSL+ GYC + + D+ + MT V P++ ++S +I+G+C ++ +
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 182 ALNL 185
A+ L
Sbjct: 463 AMGL 466
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL ++ +PNV +Y I LC+D + +A +F M + P + TY+ +I G+
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C G + A L E+++ + P+V+ F TLVD K + A+++ M+K G PN+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
YN L+ G+C + + + + M + ++PDV++Y+I+ING C V EA L +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A+ LL +++ + P+V Y +I+ LC + V +A LF +M +RI P+ TY
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI G+C ME A+ L +EM + P++ITF+TL+D +K A + M
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+VVTY +L+D + + + +++ M + + P+ +++ +++GF K +
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532
Query: 182 ALNLLK 187
A++ +
Sbjct: 533 AIDFYQ 538
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 94/169 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L ++++ + P+ YN++I CK+ + A +L SEM + P +IT++TLI
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C V ++AA+ L EM +K I PDV+T+ L+DA KE +KEA + + M++ G P
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
N T+ L+DG+ ++ D + Q + ++ +I G C+
Sbjct: 513 NDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN+ Y+ +ID CK V AY L+ E++ + P V+ + TL+ GFC ++ A L
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
MV ++P++ +N L+ K G + EA +L+ M P+V TY L++G C+
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+V + +F M + P +Y+ +I+G+CK +++AL+L
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+V +Y + K L + L EM + I P V Y I C +ME A +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
M + P++ T++ ++D K G V++A + ++ PNVV + +L+DG+C
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCK 316
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+E+ + +F M + V P+++ Y+ +I+G CK + EA+ LL
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 8/209 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG AL + R+++ P+ +I++ L + + + + + M+++ + P V
Sbjct: 145 MGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHI 201
Query: 61 YNTLIFGFCI-VGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
Y L F C G LL+EM I P+V + + L ++ +++EA+ + +M
Sbjct: 202 YFVL-FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELM 260
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
K G PN+ TY++++DGYC V + ++ + E+ P+V + +++GFCK + +
Sbjct: 261 KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 180 DEALNLLKHPILYWM---LYAKAIMLTGQ 205
A +L H + + + LY ++ G
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ A+ L ++ K P+VV Y +ID+ K+ + +A L+S+M+ I P T+ L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ GF G++ A+ E + + + F L++ L + G + A + M G
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
P++ +Y S++ G+ K + T + M + + P++
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL 619
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 102/182 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G +L ++ + + YN +ID CK VN AY L EM TK PTV+TY
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++I G + +++ A L E K I +V+ +++L+D K GR+ EA +L +++
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN+ T+NSL+D +E+N+ F +M +++ TP+ +Y I+ING CK++ ++
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 182 AL 183
A
Sbjct: 746 AF 747
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 104/185 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A QLL +++ K +P VV Y ++ID L K +++AY LF E +KRI V+ Y
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++LI GF VG+++ A +L E++ K + P++ T+N+L+DAL K + EA M +
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PN VTY L++G C V++ NK + M + + P SY+ MI+G K + E
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 182 ALNLL 186
A L
Sbjct: 781 AGALF 785
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A + +I+ +P+ V Y ++I LCK +++A +F + R P
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT+I G+ G+ + A LL K P VI +N ++ L K G+V EA V M
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K+ PN+ TYN L+D C +++ ++ ++M + + P+V + +IM++ CK + +D
Sbjct: 371 KDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 181 EALNLLKH 188
EA + +
Sbjct: 430 EACAMFEE 437
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 36/221 (16%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG AL++ +++ K A PN+ YN +ID LC+ ++ A+ L M + P V T
Sbjct: 356 MGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
N ++ C +++ A + EM K PD ITF +L+D L K GRV +A V M+
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 121 KEGEKPNVVTYNSLM----------DGY-----------------------CLVK--EVN 145
+ N + Y SL+ DG+ C+ K E
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
K + +F + PD SYSI+I+G K +E L
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+Q++R+ + +P Y T+I + + LF +M PTV + TLI G
Sbjct: 156 VQMMRKFK---FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
F G++++A+ LL+EM S++ D++ +N +D+ K G+V A + G KP+
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
VTY S++ C +++ ++F + + P ++Y+ MI G+ DEA +LL+
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 188 H 188
Sbjct: 333 R 333
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 92/182 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + ++ K P+ + + ++ID L K V+DAY ++ +M+ I Y +LI
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
F G+ E + +M+ ++ +PD+ NT +D + K G ++ + + + P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +Y+ L+ G N+T ++F +M + D +Y+I+I+GFCK V++A LL
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 187 KH 188
+
Sbjct: 611 EE 612
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H+ L L +Q+Q +P V ++ T+I K+ V+ A +L EM + + ++ YN
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
I F VG+++ A +E+ + PD +T+ +++ L K R+ EA + + K
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
P YN+++ GY + ++ + P V +Y+ ++ K+ VDEA
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 183 LNLLKH 188
L + +
Sbjct: 363 LKVFEE 368
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ++ + + ++ P++ + NT +D + K +F E+ +R P +Y
Sbjct: 496 GRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSY 555
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI G G L M + D +N ++D K G+V +A +L M
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G +P VVTY S++DG + +++ +F + +V YS +I+GF K+ +DE
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 182 ALNLLKH 188
A +L+
Sbjct: 676 AYLILEE 682
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +L ++ K PN+ +N+++D+L K + +N+A F M + +P +T
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI G C V + A EM + + P I++ T++ L+K G + EA +
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ 156
G P+ YN++++G + N+ D F+ +
Sbjct: 790 ANGGVPDSACYNAMIEG---LSNGNRAMDAFSLFEE 822
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A ++ ++ + N ++Y ++I + D + ++ +M+ + SP +
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
NT + G+ E + E+ + PD +++ L+ L K G E + M
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G + YN ++DG+C +VNK + M P V +Y +I+G KI +D
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 181 EALNLLKH 188
EA L +
Sbjct: 640 EAYMLFEE 647
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L + + K + NVV+Y+++ID K +++AY + E++ K ++P + T+N+L+
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
++ A+ M P+ +T+ L++ L K + +A M K+G KP
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++Y +++ G + + +F+ PD Y+ MI G +A +L
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 187 KH 188
+
Sbjct: 821 EE 822
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIID---SLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLI 65
Q+L ++ P+V NT I+ K + + Y++ M + P Y TLI
Sbjct: 119 QILGEMSVAGFGPSV---NTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLI 175
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
F V + + L +M P V F TL+ +KEGRV A ++L M
Sbjct: 176 GAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLD 235
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++V YN +D + V +V+ F+ + + PD +Y+ MI CK +DEA+ +
Sbjct: 236 ADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEM 295
Query: 186 LKH 188
+H
Sbjct: 296 FEH 298
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+YN+L+ +A +L EM + P V T +V K +++E +V+ +M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
K +P Y +L+ + V + +F M ++ P V ++ +I GF K V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 180 DEALNLL 186
D AL+LL
Sbjct: 220 DSALSLL 226
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 122 bits (305), Expect = 2e-28, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 108/181 (59%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++ + + +V YNT++D++CK ++ A+ + ++M KRI P V++Y+T+I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF G+ + A+ L EM I D +++NTL+ +K GR +EA ++L M G K
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VVTYN+L+ GY + ++ K +F M + V P++ +YS +I+G+ K + EA+ +
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 187 K 187
+
Sbjct: 538 R 538
Score = 115 bits (288), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/185 (35%), Positives = 100/185 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L Q+ K PNVV Y+T+ID K ++A NLF EM I+ ++Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTL+ + VG+ E A+ +L EM I DV+T+N L+ K+G+ E K V M +
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
E PN++TY++L+DGY + +IF + DV YS +I+ CK +V
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 182 ALNLL 186
A++L+
Sbjct: 568 AVSLI 572
Score = 97.4 bits (241), Expect = 6e-21, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKL-VNDAYNLFSEMVTKRISPTVITYNTLI 65
A+ + ++ +PN+V YN +ID+ K + F EM + P IT+N+L+
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
G EAA L +EM + I DV ++NTL+DA+ K G++ A +LA M +
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
PNVV+Y++++DG+ ++ ++F M + + D SY+ +++ + K+ +EAL++
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 186 LK 187
L+
Sbjct: 467 LR 468
Score = 92.8 bits (229), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 85/152 (55%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + AL +LR++ + +VV YN ++ K ++ +F+EM + + P ++T
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+TLI G+ G + A+ + E + DV+ ++ L+DAL K G V A +++ M
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFN 152
KEG PNVVTYNS++D + ++++ D N
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 100/208 (48%), Gaps = 27/208 (12%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
++ +++ + PN++ Y+T+ID K L +A +F E + + V+ Y+ LI
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRV------------------- 109
C G + +AV L++EM + I+P+V+T+N+++DA + +
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSAL 619
Query: 110 -----KEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVW 164
E V+ + + + N T +G ++E++ ++F M Q+E+ P+V
Sbjct: 620 SALTETEGNRVIQLFGQLTTESNNRTTKDCEEG---MQELSCILEVFRKMHQLEIKPNVV 676
Query: 165 SYSIMINGFCKIKMVDEALNLLKHPILY 192
++S ++N + ++A LL+ L+
Sbjct: 677 TFSAILNACSRCNSFEDASMLLEELRLF 704
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 15 QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQM 74
QGK A + +I +L + V A +F TV ++ LI + G
Sbjct: 232 QGKLA-------SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 284
Query: 75 EAAVCLLNEMVLKSINPDVITFNTLVDALSKEG-RVKEAKNVLAVMIKEGEKPNVVTYNS 133
E A+ + N M + P+++T+N ++DA K G K+ M + G +P+ +T+NS
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
L+ +++F+ MT + DV+SY+ +++ CK +D A +L
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 105/185 (56%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL L++++ PN+ +YN +IDSLCK + ++A LF M + P +TY
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI FC G+++ A+ L EMV + V +N+L++ K G + A+ +A MI
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ +P VVTY SLM GYC ++NK +++ MT + P +++++ +++G + ++ +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 182 ALNLL 186
A+ L
Sbjct: 526 AVKLF 530
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 101/181 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL L ++ + +V YN++I+ CK ++ A +EM+ K++ PTV+TY
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+L+ G+C G++ A+ L +EM K I P + TF TL+ L + G +++A + M +
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
KPN VTYN +++GYC +++K + MT+ + PD +SY +I+G C E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 182 A 182
A
Sbjct: 596 A 596
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 108/180 (60%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +++ ++ N+V YN +ID LCK + V +A + ++ K + P V+TY TL++
Sbjct: 246 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 305
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C V + E + +++EM+ +P ++LV+ L K G+++EA N++ ++ G P
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+ YN+L+D C ++ ++ + +F+ M ++ + P+ +YSI+I+ FC+ +D AL+ L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L ++ GK P++ + T++ L + L+ DA LF+EM + P +TY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G+C G M A L EM K I PD ++ L+ L G+ EAK + + K
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ N + Y L+ G+C ++ + + M Q V D+ Y ++I+G K K
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 182 ALNLLKH 188
LLK
Sbjct: 666 FFGLLKE 672
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 98/188 (52%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G A + ++ K +P VV Y +++ C +N A L+ EM K I+P++ T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ TL+ G G + AV L NEM ++ P+ +T+N +++ +EG + +A L M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G P+ +Y L+ G CL + ++ K + + + + Y+ +++GFC+ ++
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 181 EALNLLKH 188
EAL++ +
Sbjct: 630 EALSVCQE 637
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 4/156 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ--MEAAV 78
PN V Y +I+ LCK VN+A L S+M P +TY + G+ M+ AV
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DILTKGEVDMQKAV 773
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
L N +LK + + T+N L+ ++GR++EA ++ MI +G P+ +TY ++++
Sbjct: 774 ELHN-AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
C +V K +++N+MT+ + PD +Y+ +I+G C
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L ++Q S+ PN V Y +D L K ++ + K + TY
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI GFC G++E A L+ M+ ++PD IT+ T+++ L + VK+A + M +
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+G +P+ V YN+L+ G C+ E+ K ++ N M + + P+
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 35/216 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A++L ++ + +PN V YN +I+ C++ ++ A+ EM K I P +Y
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 62 NTLIFGFCIVGQ-----------------------------------MEAAVCLLNEMVL 86
LI G C+ GQ +E A+ + EMV
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ ++ D++ + L+D K K +L M G KP+ V Y S++D + +
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
I++ M P+ +Y+ +ING CK V+EA
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ + + + GK +P+VV Y T++ LCK + + EM+ R SP+ ++L+
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G G++E A+ L+ +V ++P++ +N L+D+L K + EA+ + M K G +P
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 127 NVVTY-----------------------------------NSLMDGYCLVKEVNKTKDIF 151
N VTY NSL++G+C +++ +
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
M ++ P V +Y+ ++ G+C +++AL L
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P V + ++ L K + A LF++MV+ I P V Y +I C + + A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+ M + +++ +N L+D L K+ +V EA + + + KP+VVTY +L+ G C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
V+E ++ + M + +P + S ++ G K ++EALNL+K
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+ ++ G P+ + Y T+I+ LC+ V A L++ M K I P + Y
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
NTLI G C+ G+M A L NEM+ + + P+ T T
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 35/219 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL + +++ + ++V Y +ID K K + L EM + + P + Y
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++I G + A + + M+ + P+ +T+ +++ L K G V EA+ + + M
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 122 EGEKPNVVTYNSLMD-----------------------------------GYCLVKEVNK 146
PN VTY +D G+C + +
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEE 805
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++ M V+PD +Y+ MIN C+ V +A+ L
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 109/188 (57%), Gaps = 2/188 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G T+ ALQLL + K +PN V YN II+ LCKD LV DA + M +R P IT
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKS--INPDVITFNTLVDALSKEGRVKEAKNVLAV 118
YN L+ G C G ++ A LL M+ S +PDVI++N L+ L KE R+ +A ++ +
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
++++ + VT N L++ +VNK +++ ++ ++ + +Y+ MI+GFCK M
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 179 VDEALNLL 186
++ A LL
Sbjct: 510 LNVAKGLL 517
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 101/180 (56%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ LLR+++ S P+V YNT+I C+ K + A L +EM S +++T+ LI
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC G+M+ A+ L EM + D++ + +L+ G + K + +++ G+ P
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+TYN+L+ G+C + ++ + +IF M + V P+V++Y+ +I+G C + EAL LL
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 103/181 (56%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+L +++G ++V + +ID+ CK +++A EM + ++ Y +LI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC G+++ L +E++ + +P IT+NTL+ K G++KEA + MI+ G +P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NV TY L+DG C V + + + N M + + P+ +Y+I+IN CK +V +A+ ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 187 K 187
+
Sbjct: 376 E 376
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 103/185 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L++++ + ++V+Y ++I C ++ LF E++ + SP ITY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC +GQ++ A + M+ + + P+V T+ L+D L G+ KEA +L +MI+
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ E+PN VTYN +++ C V +I M + PD +Y+I++ G C +DE
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 182 ALNLL 186
A LL
Sbjct: 406 ASKLL 410
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 2/186 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L ++ + P + YNT+I CK + +A +F M+ + + P V TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI G C VG+ + A+ LLN M+ K P+ +T+N +++ L K+G V +A ++ +M K
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME--VTPDVWSYSIMINGFCKIKMV 179
+P+ +TYN L+ G C ++++ + M + PDV SY+ +I+G CK +
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 180 DEALNL 185
+AL++
Sbjct: 441 HQALDI 446
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 93/169 (55%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NV +N ++ LC++ A +L EM + P V +YNT+I GFC ++E A+ L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
NEM + ++T+ L+DA K G++ EA L M G + ++V Y SL+ G+C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
E+++ K +F+ + + +P +Y+ +I GFCK+ + EA + + I
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 2/190 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + A ++ + + +PNV Y +ID LC +A L + M+ K P +T
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I C G + AV ++ M + PD IT+N L+ L +G + EA +L +M+
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 121 KEGE--KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
K+ P+V++YN+L+ G C +++ DI++ + + D + +I++N K
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 179 VDEALNLLKH 188
V++A+ L K
Sbjct: 475 VNKAMELWKQ 484
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 95/180 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL + + K + V N +++S K VN A L+ ++ +I TY +I
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC G + A LL +M + + P V +N L+ +L KEG + +A + M ++ P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV++N ++DG ++ + + M++ ++PD+++YS +IN F K+ +DEA++
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++L +QI N Y +ID CK ++N A L +M + P+V Y
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ C G ++ A L EM + PDV++FN ++D K G +K A+++L M +
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
G P++ TY+ L++ + + +++ F+ M PD
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A LL +++ QP+V YN ++ SLCK+ ++ A+ LF EM P V+++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G G +++A LL M ++PD+ T++ L++ K G + EA + M+
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 122 EGEKPNVVTYNSLMDGYCLVK-EVNKTKDIFNTMTQMEVTPD 162
G +P+ +S++ YC+ + E +K ++ + ++ D
Sbjct: 628 SGFEPDAHICDSVLK-YCISQGETDKLTELVKKLVDKDIVLD 668
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 6/180 (3%)
Query: 28 TIIDSLCKDK--LVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
T + SLC+D + +A ++F + V S N L+ E A +M+
Sbjct: 41 TKLRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGNNLMAKLVRSRNHELAFSFYRKML 99
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ ++ + L++ + + A VLA+M+K G NV +N L+ G C E
Sbjct: 100 ETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECG 159
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL---LKHPILYWMLYAKAIML 202
K + M + + PDV+SY+ +I GFC+ K +++AL L +K W L I++
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 73/147 (49%)
Query: 42 AYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD 101
A++ + +M+ ++ + L+ + + + A +L M+ + +V N L+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 102 ALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
L + +A ++L M + P+V +YN+++ G+C KE+ K ++ N M +
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 162 DVWSYSIMINGFCKIKMVDEALNLLKH 188
+ ++ I+I+ FCK +DEA+ LK
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKE 237
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 100/185 (54%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G T + + + G A+P V YN +ID +CK+ V A LF EM + + P +T
Sbjct: 240 LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVT 299
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN++I GF VG+++ VC EM PDVIT+N L++ K G++ M
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 359
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G KPNVV+Y++L+D +C + + + M ++ + P+ ++Y+ +I+ CKI +
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 181 EALNL 185
+A L
Sbjct: 420 DAFRL 424
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 96/176 (54%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
L+ R+++G +PNVV Y+T++D+ CK+ ++ A + +M + P TY +LI
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C +G + A L NEM+ + +V+T+ L+D L R+KEA+ + M G P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
N+ +YN+L+ G+ K +++ ++ N + + PD+ Y I G C ++ ++ A
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 95/185 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L +++ + P+ V YN++ID K ++D F EM P VITY
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI FC G++ + EM + P+V++++TLVDA KEG +++A M +
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN TY SL+D C + ++ + N M Q+ V +V +Y+ +I+G C + + E
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 182 ALNLL 186
A L
Sbjct: 456 AEELF 460
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ A +L ++ + NVV Y +ID LC + + +A LF +M T + P + +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI GF M+ A+ LLNE+ + I PD++ + T + L +++ AK V+ M
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTK--DIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
+ G K N + Y +LMD Y K N T+ + + M ++++ V ++ ++I+G CK K+
Sbjct: 535 ECGIKANSLIYTTLMDAY--FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 179 VDEALNLLKHPILYWMLYAKAIMLTG 204
V +A++ + L A A + T
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTA 618
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+Q +++ P N ++ K +D F +M+ PTV T
Sbjct: 205 LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 264
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I C G +EAA L EM + + PD +T+N+++D K GR+ + M
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+P+V+TYN+L++ +C ++ + + M + P+V SYS +++ FCK M+
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 181 EALNL 185
+A+
Sbjct: 385 QAIKF 389
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P +++ + L ++ +A FS+M R+ P + N L+ F +G+ +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+M+ P V T+N ++D + KEG V+ A+ + M G P+ VTYNS++DG+
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
V ++ T F M M PDV +Y+ +IN FCK
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 345
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVIT 60
G+ L LL +++ + VV + +ID LCK+KLV+ A + F+ + +
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ +I G C Q+EAA L +MV K + PD + +L+D K+G V EA + M
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD-VWSYSIMINGFCKIKMV 179
+ G K +++ Y SL+ G ++ K + M + PD V S++ + ++ +
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY-ELGCI 734
Query: 180 DEALN----LLKHPIL 191
DEA+ L+KH +L
Sbjct: 735 DEAVELQSYLMKHQLL 750
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK---DKLVNDAYNLFSEMVTKRISPTV 58
G ALQ+ +++ +PN++ NT++ L + ++ A +F +MV +S V
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLA 117
T+N L+ G+C+ G++E A+ +L MV + +NPD +T+NT++ A+SK+GR+ + K +L
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 118 VMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIK 177
M K G PN VTYN+L+ GYC + + + I M Q V PD+ +Y+I+ING C
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 178 MVDEALNLL 186
+ E L L+
Sbjct: 325 SMREGLELM 333
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 103/186 (55%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G AL+++R++ K + N + NTI+D+LCK++ +++A+NL + + +T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI GF ++E A+ + +EM I P V TFN+L+ L G+ + A +
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G P+ T+NS++ GYC V K + +N + PD ++ +I++NG CK M +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 181 EALNLL 186
+ALN
Sbjct: 609 KALNFF 614
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVI 59
+G + A +L+ Q++ + N V +N + LCK++ E+V SP ++
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TY+TLI + VG + A+ ++ EM K I + IT NT++DAL KE ++ EA N+L
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
K G + VTY +L+ G+ ++V K ++++ M ++++TP V +++ +I G C
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL++ +++ P V +N++I LC A F E+ + P T+N++I
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C G++E A NE + S PD T N L++ L KEG ++A N +I+E E
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE-V 623
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ VTYN+++ +C K++ + D+ + M + + PD ++Y+ I+ + + E LL
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Query: 187 K 187
K
Sbjct: 684 K 684
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 98/185 (52%), Gaps = 1/185 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R L+L+ ++ QP+VV YNT+ID + L +A L +M + +T+
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMV-LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
N + C + EA + E+V + +PD++T++TL+ A K G + A ++ M
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G K N +T N+++D C +++++ ++ N+ + D +Y +I GF + + V+
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 181 EALNL 185
+AL +
Sbjct: 504 KALEM 508
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 2 GHTRPALQLL-RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G AL +L R + P+ V YNTI+ ++ K ++D L +M + P +T
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN L++G+C +G ++ A ++ M ++ PD+ T+N L++ L G ++E ++ M
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME---VTPDVWSYSIMINGFCK 175
+P+VVTYN+L+DG C E+ + + M QME V + +++I + CK
Sbjct: 338 SLKLQPDVVTYNTLIDG-CF--ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 93/168 (55%), Gaps = 1/168 (0%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITYNTLIFGFCIVGQMEAAVCL 80
NV +N +++ C + + DA + MV++ +++P +TYNT++ G++ L
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M + P+ +T+N LV K G +KEA ++ +M + P++ TYN L++G C
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + ++ + M +++ PDV +Y+ +I+G ++ + EA L++
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 98/188 (52%), Gaps = 3/188 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + A Q++ ++ + P++ YN +I+ LC + + L M + ++ P V+T
Sbjct: 288 LGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVT 347
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEA--KNVLAV 118
YNTLI G +G A L+ +M + + +T N + L KE + +EA + V +
Sbjct: 348 YNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK-REAVTRKVKEL 406
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
+ G P++VTY++L+ Y V +++ ++ M Q + + + + +++ CK +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 179 VDEALNLL 186
+DEA NLL
Sbjct: 467 LDEAHNLL 474
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A++ ++ P+ +N+II CK+ V A+ ++E + P T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G C G E A+ N ++ + D +T+NT++ A K+ ++KEA ++L+ M +
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLI-EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 122 EGEKPNVVTYNSLM 135
+G +P+ TYNS +
Sbjct: 654 KGLEPDRFTYNSFI 667
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 75 EAAVCLLNEMVLKSIN----PDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
+A++ L N ++ +++ P F+ + A EG+ A + MI+ KPN++T
Sbjct: 109 DASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLT 168
Query: 131 YNSLMDG---YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
N+L+ G Y ++ +++F+ M ++ V+ +V ++++++NG+C +++AL +L+
Sbjct: 169 CNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLE 228
Query: 188 H 188
Sbjct: 229 R 229
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 100/185 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A++LL ++ K +V YN +I LC+ + Y L +M + I P +TY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GF G++ A LLNEM+ ++P+ +TFN L+D EG KEA + +M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+ V+Y L+DG C E + + + M + V +Y+ MI+G CK +DE
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 182 ALNLL 186
A+ LL
Sbjct: 462 AVVLL 466
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 1/195 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH R A + L+ + A + VMYNT++ ++CK + A +LF EMV + I P TY
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+LI G C G+ A+ E + + P+ + + VD + K G+ K M
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G P++VT N+++DGY + ++ KT D+ M P++ +Y+I+++G+ K K V
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811
Query: 181 EALNLLKHPILYWML 195
+ L + IL +L
Sbjct: 812 TSFLLYRSIILNGIL 826
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ LL ++ P++V Y+ +I+ CK A + + +SP I Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+TLI+ C +G ++ A+ + M+L+ D TFN LV +L K G+V EA+ + M
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN V+++ L++GY E K +F+ MT++ P ++Y ++ G CK + E
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 636
Query: 182 ALNLLK 187
A LK
Sbjct: 637 AEKFLK 642
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + L+++++ P +V YNT++ CK A L M +K + V TY
Sbjct: 247 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY 306
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI C ++ LL +M + I+P+ +T+NTL++ S EG+V A +L M+
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN VT+N+L+DG+ + +F M +TP SY ++++G CK D
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 182 A 182
A
Sbjct: 427 A 427
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 97/186 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + AL++ ++ K P+ V Y ++D LCK+ + A + M + ITY
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I G C G ++ AV LLNEM I+PD++T++ L++ K GR K AK ++ + +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN + Y++L+ C + + + I+ M T D +++++++ CK V E
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 182 ALNLLK 187
A ++
Sbjct: 567 AEEFMR 572
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 101/192 (52%), Gaps = 6/192 (3%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
L+++ + P+V +N +I+ LC + + L +M +PT++TYNT++ +
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C G+ +AA+ LL+ M K ++ DV T+N L+ L + R+ + +L M K PN
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
VTYN+L++G+ +V + N M ++P+ +++ +I+G EAL
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK---- 394
Query: 189 PILYWMLYAKAI 200
+++M+ AK +
Sbjct: 395 --MFYMMEAKGL 404
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 95/185 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A QLL ++ PN V +N +ID + +A +F M K ++P+ ++Y L+
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C + + A M + IT+ ++D L K G + EA +L M K+G P
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++VTY++L++G+C V K+I + ++ ++P+ YS +I C++ + EA+ +
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 187 KHPIL 191
+ IL
Sbjct: 537 EAMIL 541
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + +L++ R + P+V N I+ S+ K ++ EM+ ++I P V T+
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 236
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI C G E + L+ +M P ++T+NT++ K+GR K A +L M
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
+G +V TYN L+ C + K + M + + P+ +Y+ +INGF
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG + A+++ + + + +N ++ SLCK V +A M + I P ++
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
++ LI G+ G+ A + +EM +P T+ +L+ L K G ++EA+ L +
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+ V YN+L+ C + K +F M Q + PD ++Y+ +I+G C+
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 700
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 6 PALQLLRQIQ---GKSA-------------QPNVVMYNTIIDSLCKDKLVNDAYNLFSEM 49
PA +L+++ GKS+ N +Y+ +I ++ ++ D+ +F M
Sbjct: 130 PARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLM 189
Query: 50 VTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRV 109
+P+V T N ++ G+ + L EM+ + I PDV TFN L++ L EG
Sbjct: 190 GLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSF 249
Query: 110 KEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
+++ ++ M K G P +VTYN+++ YC ++ + M V DV +Y+++
Sbjct: 250 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 309
Query: 170 INGFCKIKMVDEALNLLK 187
I+ C+ + + LL+
Sbjct: 310 IHDLCRSNRIAKGYLLLR 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG LL ++ ++ PN+ YN ++ K K V+ ++ L+ ++ I P +T
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
++L+ G C +E + +L + + + D TFN L+ G + A +++ VM
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G + T ++++ +++ + + M++ ++P+ Y +ING C++ +
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 181 EAL 183
A
Sbjct: 952 TAF 954
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
+ ++ L ++ ++ + EM + ISP Y LI G C VG ++ A + EM+
Sbjct: 903 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 962
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
I P + + +V AL+K G+ EA +L M+K P + ++ +LM C V +
Sbjct: 963 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 1022
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFC 174
++ M+ + D+ SY+++I G C
Sbjct: 1023 ALELRVVMSNCGLKLDLVSYNVLITGLC 1050
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+L ++ + P Y +I+ LC+ + A+ + EM+ +I P + + ++
Sbjct: 921 VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALA 980
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G+ + A LL M+ + P + +F TL+ K G V EA + VM G K ++V
Sbjct: 981 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
+YN L+ G C ++ +++ M + +Y +I G
Sbjct: 1041 SYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + + Q+ P++V N +ID + + +L EM + P + TY
Sbjct: 738 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 797
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G+ + + L ++L I PD +T ++LV + + ++ +L I
Sbjct: 798 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 857
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
G + + T+N L+ C E+N D+ MT + ++ D
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 49 MVTKRI---SPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSK 105
M T R+ +P+V Y+ LI + G ++ ++ + M L NP V T N ++ ++ K
Sbjct: 153 MTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 210
Query: 106 EGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWS 165
G + L M+K P+V T+N L++ C K+ + M + P + +
Sbjct: 211 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 270
Query: 166 YSIMINGFCKIKMVDEALNLLKH 188
Y+ +++ +CK A+ LL H
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDH 293
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
L++L+ + + + +N +I C + +N A++L M + IS T + ++
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ + + +L+EM + I+P+ + L++ L + G +K A V MI P
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
V ++++ + ++ + M +M++ P + S++ +++ CK V EAL L
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 111/188 (59%), Gaps = 3/188 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMV-TKRISPTVIT 60
G + +++L + ++ P+V+ +N+++ L K A++LF EM T ++P T
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+NTLI GFC ++ A + +M L NPDV+T+NT++D L + G+VK A NVL+ M+
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 121 KEGE--KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
K+ PNVV+Y +L+ GYC+ +E+++ +F+ M + P+ +Y+ +I G +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 179 VDEALNLL 186
DE ++L
Sbjct: 332 YDEIKDIL 339
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 16/203 (7%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR--ISPTVITYNTL 64
A ++ + ++ P+VV YNTIID LC+ V A+N+ S M+ K + P V++Y TL
Sbjct: 228 AFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTL 287
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ G+C+ +++ AV + ++M+ + + P+ +T+NTL+ LS+ R E K++L I +
Sbjct: 288 VRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL---IGGND 344
Query: 125 K-----PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
P+ T+N L+ +C ++ +F M M++ PD SYS++I C
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEF 404
Query: 180 DEALNLLKHPILYWMLYAKAIML 202
D A L+ L+ K ++L
Sbjct: 405 DRA------ETLFNELFEKEVLL 421
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N+LI + G + +V L M I+P V+TFN+L+ L K GR A ++ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 121 KE-GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+ G P+ T+N+L++G+C V++ IF M PDV +Y+ +I+G C+ V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 180 DEALNLL 186
A N+L
Sbjct: 261 KIAHNVL 267
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI------- 54
GH A+++ +++ P+ Y+ +I +LC + A LF+E+ K +
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 55 SPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKN 114
P YN + C G+ + A + +++ + + D ++ TL+ +EG+ K A
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYE 485
Query: 115 VLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
+L +M++ P++ TY L+DG + E D M + P ++ ++
Sbjct: 486 LLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELA 545
Query: 175 KIKMVDEALNLL 186
K K +E+ L+
Sbjct: 546 KRKFANESFCLV 557
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 96 FNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMT 155
FN+L+ + G +E+ + M + G P+V+T+NSL+ D+F+ M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 156 QM-EVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILY 192
+ VTPD ++++ +INGFCK MVDEA + K LY
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELY 238
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 104/190 (54%), Gaps = 5/190 (2%)
Query: 2 GHTRPA-LQLLRQ----IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
GH+R + L+++ + K QP++V+YNT+++ CK+ + A N+ M+ + + P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
ITY TLI GFC G +E A+ + EM I D + F+ LV + KEGRV +A+ L
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
M++ G KP+ VTY +MD +C + + M P V +Y++++NG CK+
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 177 KMVDEALNLL 186
+ A LL
Sbjct: 534 GQMKNADMLL 543
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 104/186 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A ++ +I +S QP VV +NT+I+ CK +++ + L +M R P V TY
Sbjct: 254 GNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTY 313
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI C +M+ A L +EM + + P+ + F TL+ S+ G + K M+
Sbjct: 314 SALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLS 373
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G +P++V YN+L++G+C ++ ++I + M + + PD +Y+ +I+GFC+ V+
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 182 ALNLLK 187
AL + K
Sbjct: 434 ALEIRK 439
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 103/187 (55%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ +L Q++ +P+V Y+ +I++LCK+ ++ A+ LF EM + + P +
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ TLI G G+++ +M+ K + PD++ +NTLV+ K G + A+N++ MI
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G +P+ +TY +L+DG+C +V +I M Q + D +S ++ G CK V
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 181 EALNLLK 187
+A L+
Sbjct: 468 DAERALR 474
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 91/154 (59%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NV ++N +++ CK+ ++DA +F E+ + + PTV+++NTLI G+C VG ++ L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
++M PDV T++ L++AL KE ++ A + M K G PN V + +L+ G+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
E++ K+ + M + PD+ Y+ ++NGFCK
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL++ +++ + + V ++ ++ +CK+ V DA EM+ I P +TY
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ FC G + LL EM P V+T+N L++ L K G++K A +L M+
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
G P+ +TYN+L++G+ + N +K ++ + D+ SY ++N
Sbjct: 549 IGVVPDDITYNTLLEGH--HRHANSSKRYIQK-PEIGIVADLASYKSIVN 595
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 92 DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
+V FN L++ KEG + +A+ V + K +P VV++N+L++GYC V +++ +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ M + PDV++YS +IN CK +D A L
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLF 333
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 84/180 (46%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+Q R + + ++D + K + + E++ V
Sbjct: 183 LGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYV 242
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N L+ FC G + A + +E+ +S+ P V++FNTL++ K G + E + M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K +P+V TY++L++ C +++ +F+ M + + P+ ++ +I+G + +D
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 2 GHTRPALQLLRQ-IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G T AL L Q I+G QPNVV YNT++ C + A ++FS M SP + T
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y +LI GF G ++ AV + N+M+ P+V+ + +V+AL + + KEA++++ +M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKMV 179
KE P+V T+N+ + G C ++ + +F M Q P++ +Y+ +++G K +
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 180 DEALNLLK 187
+EA L +
Sbjct: 510 EEAYGLTR 517
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P V +YN +I+ LCK+ A+ L EMV K ISP VI+Y+TLI C GQ+E A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE-GEKPNVVTYNSLMDGY 138
L +M+ + +P++ T ++LV G +A ++ MI+ G +PNVV YN+L+ G+
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
C + K +F+ M ++ +P++ +Y +INGF K +D A+
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 6/183 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL ++ K P+ V Y T+I S+C+ LV + L +R P V YN LI
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALIN 254
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C + A L+ EMV K I+P+VI+++TL++ L G+++ A + L M+K G P
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ-MEVTPDVWSYSIMINGFCKIKMVDEALNL 185
N+ T +SL+ G L D++N M + + P+V +Y+ ++ GFC + +A+++
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374
Query: 186 LKH 188
H
Sbjct: 375 FSH 377
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+++ +I+ P+V +YN ++D+L + + Y ++ +M P V T
Sbjct: 124 VGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFT 183
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN L+ C +++ A LL EM K PD +++ T++ ++ + G VKE + +
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----L 238
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
E +P V YN+L++G C + ++ M + ++P+V SYS +IN C ++
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 181 EALNLLK-------HPILY 192
A + L HP +Y
Sbjct: 299 LAFSFLTQMLKRGCHPNIY 317
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
Query: 2 GHTRPALQLLRQI-QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G A ++ RQ+ Q PN+V YN ++D L K + +AY L E+ + + + T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNTL+ G C G A+ L+ +M++ +PD IT N ++ A K+G+ + A +L ++
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 121 --KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
+ +P+V++Y +++ G C + M + P + ++S++IN F
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 98/208 (47%), Gaps = 38/208 (18%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PNVV+Y ++++LC+ +A +L M + +P+V T+N I G C G+++ A +
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 81 LNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNV------------------------ 115
+M + P+++T+N L+D L+K R++EA +
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Query: 116 -----------LAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMT--QMEVTPD 162
+ M+ +G+ P+ +T N ++ YC + + + + ++ + + PD
Sbjct: 540 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599
Query: 163 VWSYSIMINGFCKIKMVDEALNLLKHPI 190
V SY+ +I G C+ ++ + LL+ I
Sbjct: 600 VISYTNVIWGLCRSNCREDGVILLERMI 627
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
+ +I L D V+ L +M + + + ++I + VG E AV + +
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+P V +N ++D L E R++ V M ++G +PNV TYN L+ C +V+
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
K + M+ PD SY+ +I+ C++ +V E L
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L R+I + + + YNT++ C L A L +M+ SP IT N +I
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIIL 571
Query: 67 GFCIVGQMEAAVCLLN--EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+C G+ E A +L+ + PDVI++ ++ L + ++ +L MI G
Sbjct: 572 AYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIF 151
P++ T++ L++ + ++ ++ + D F
Sbjct: 632 VPSIATWSVLINCF-ILDDIVRAHDQF 657
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 105/179 (58%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+ L+Q+ +V YN +ID LCK + + +A +EM + ISP ++T+NT + G+
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
+ G ++ +L ++++ PDVITF+ +++ L + +K+A + M++ G +PN
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+TYN L+ C + +++ +F M + ++PD+++Y+ I FCK++ V +A LLK
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 84/146 (57%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+V+ ++ II+ LC+ K + DA++ F EM+ I P ITYN LI C G + +V
Sbjct: 492 KPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVK 551
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L +M ++PD+ +N + + K +VK+A+ +L M++ G KP+ TY++L+
Sbjct: 552 LFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALS 611
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWS 165
++ +++F+++ + PD ++
Sbjct: 612 ESGRESEAREMFSSIERHGCVPDSYT 637
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
+ +P Y ++ +L + ++ +M + +V +YN +I C ++E
Sbjct: 384 RGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A L EM + I+P+++TFNT + S G VK+ VL ++ G KP+V+T++ +++
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIIN 503
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
C KE+ D F M + + P+ +Y+I+I C D ++ L
Sbjct: 504 CLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLF 553
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
QI +P+ +YN +ID+L K ++ AY F +M + P TYN LI G C G
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
++ A+ L+ +M + P+V T+ L+D GRV EA L +M PN T
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
Query: 133 SLMDG 137
+ + G
Sbjct: 290 TFVHG 294
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 39/215 (18%)
Query: 11 LRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCI 70
+Q++ +P+ YN +I +CK +V++A L +M + P V TY LI GF I
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 71 VGQMEAAVCLLNEMVLKSINPDVITFNTLVDA---------------------------- 102
G+++ A+ L M ++ +NP+ T T V
Sbjct: 263 AGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVG 322
Query: 103 -------LSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK--EVNKTKDIFNT 153
LS KE L + + G P+ T+N+ M CL+K ++ +T IF+
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMS--CLLKGHDLVETCRIFDG 380
Query: 154 MTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
V P Y +++ + E LK
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQ 415
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 14/215 (6%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+++LL++I+ + + + +I S + L ++F+++ + P+ YN +I
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
++ A +M PD T+N L+ + K+G V EA ++ M +EG +P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF------CK----- 175
NV TY L+DG+ + V++ M ++ P+ + ++G CK
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVL 308
Query: 176 IKMVDEALNLLK---HPILYWMLYAKAIMLTGQFL 207
+ +++ NL + +LY + TGQFL
Sbjct: 309 VGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFL 343
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 104/181 (57%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL++L Q+ + QP V+ Y +I++ + V++A L EM+++ + P + TYNT+I
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G ++ A ++ + LK PDVI++N L+ AL +G+ +E + ++ M E P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVVTY+ L+ C ++ + ++ M + +TPD +SY +I FC+ +D A+ L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 187 K 187
+
Sbjct: 392 E 392
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 102/185 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L+ ++ + +P++ YNTII +CK+ +V+ A+ + + K P VI+Y
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G+ E L+ +M + +P+V+T++ L+ L ++G+++EA N+L +M +
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+ +Y+ L+ +C ++ + TM PD+ +Y+ ++ CK D+
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 182 ALNLL 186
AL +
Sbjct: 422 ALEIF 426
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 35/210 (16%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
+I K QP+V YN +I+ CK ++DA + M +K SP +TYN +I C G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
+++ A+ +LN+++ + P VIT+ L++A EG V EA ++ M+ G KP++ TYN
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 133 SLMDGYCLVKEVNKTKDIFNT--------------------------------MTQM--- 157
+++ G C V++ ++ MT+M
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 158 EVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ P+V +YSI+I C+ ++EA+NLLK
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G +L+ ++ + PNVV Y+ +I +LC+D + +A NL M K ++P +Y
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLA---- 117
+ LI FC G+++ A+ L M+ PD++ +NT++ L K G+ +A +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 118 -------------------------------VMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
M+ G P+ +TYNS++ C V++
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ M E P V +Y+I++ GFCK +++A+N+L+
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 94/172 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +++R ++ K +P+V+ YN ++ +L + L ++M +++ P V+TY
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI C G++E A+ LL M K + PD +++ L+ A +EGR+ A L MI
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
+G P++V YN+++ C + ++ +IF + ++ +P+ SY+ M +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ +L LL + K P+V++ +I + + A + E++ K P V Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAY 161
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI GFC + +++ A +L+ M K +PD +T+N ++ +L G++ A VL ++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ +P V+TY L++ L V++ + + M + PD+++Y+ +I G CK MVD
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 182 ALNLLKH 188
A ++++
Sbjct: 282 AFEMVRN 288
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++ L + P++V YNT++ +LCK+ + A +F ++ SP +Y
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NT+ G A+ ++ EM+ I+PD IT+N+++ L +EG V EA +L M
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+VVTYN ++ G+C + ++ +M P+ +Y+++I G E
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 182 ALNL 185
A+ L
Sbjct: 562 AMEL 565
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C G ++ LL MV K NPDVI L+ + +A V+ ++ K G+ P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
YN+L++G+C + ++ + + M + +PD +Y+IMI C +D AL +L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 189 --------PILYWMLYAKAIMLTG 204
++ + + +A ML G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEG 242
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL ++ P+VV YN ++ CK + DA N+ MV P TY
Sbjct: 487 GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMV 85
LI G G A+ L N++V
Sbjct: 547 TVLIEGIGFAGYRAEAMELANDLV 570
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 92/167 (55%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
QP+VV YN++I LC++ + A +L +M+ KRI P +T+ L+ G C G+ A
Sbjct: 218 QPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKK 277
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L+ +M + P ++ + L+ L K GR+ EAK +L M K KP+VV YN L++ C
Sbjct: 278 LMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLC 337
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V + + M P+ +Y +MI+GFC+I+ D LN+L
Sbjct: 338 TECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVL 384
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + +I + NT+I+ L + + A + F R+ P +++
Sbjct: 130 GSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSF 189
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI GF EAA + +EM+ + P V+T+N+L+ L + + +AK++L MIK
Sbjct: 190 NILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 249
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ +PN VT+ LM G C E N+ K + M P + +Y I+++ K +DE
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 182 ALNLL 186
A LL
Sbjct: 310 AKLLL 314
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A LL +++ + +P+VV+YN +++ LC + V +AY + +EM K P TY
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY 364
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I GFC + ++ + +LN M+ P TF +V L K G + A VL VM K
Sbjct: 365 RMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGK 424
Query: 122 EGEKPNVVTYNSLMDGYCL 140
+ + +L+ C+
Sbjct: 425 KNLSFGSGAWQNLLSDLCI 443
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 86/178 (48%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
Q+LR ++ ++ + ++ +I K V+ A ++F ++ + T+ + NTLI
Sbjct: 102 QILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVL 161
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G++E A + + P+ ++FN L+ + + A V M++ +P+V
Sbjct: 162 VDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
VTYNSL+ C ++ K K + M + + P+ ++ +++ G C +EA L+
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLM 279
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+ ++ + +P +V Y ++ L K +++A L EM +RI P V+ Y
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ C ++ A +L EM +K P+ T+ ++D + NVL M+
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Query: 122 EGEKPNVVTYNSL---------MDGYCLVKEVNKTKDI 150
P T+ + +D C V EV K++
Sbjct: 390 SRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL L Q Q + + Y+++I L K + + + + + + + LI
Sbjct: 65 ALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQ 124
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G ++ A+ + +++ + + NTL++ L G +++AK+ +P
Sbjct: 125 HYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N V++N L+ G+ + +F+ M +MEV P V +Y+ +I C+ + +A +LL
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 187 K 187
+
Sbjct: 245 E 245
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ LL ++Q + P+ V+YN +ID LCK + L M K P +TYNTLI
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALS---------------------- 104
G C+ G+++ AV LL MV P+ +T+ TL++ L
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 105 -------------KEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
KEG+ +EA ++ M ++G KPN+V Y+ L+DG C + N+ K+I
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
N M P+ ++YS ++ GF K + +EA+ + K
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE 457
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L R++ K +PN+V+Y+ ++D LC++ N+A + + M+ P TY
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++L+ GF G E AV + EM + + ++ L+D L GRVKEA V + M+
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME---VTPDVWSYSIMINGFCKIKM 178
G KP+ V Y+S++ G C + ++ +++ M E PDV +Y+I+++G C K
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555
Query: 179 VDEALNLL 186
+ A++LL
Sbjct: 556 ISRAVDLL 563
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 91/182 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ LL ++ PN V Y T+I+ L K + DA L S M + Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI G G+ E A+ L +M K P+++ ++ LVD L +EG+ EAK +L MI
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN TY+SLM G+ + ++ M + + + + YS++I+G C + V E
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 182 AL 183
A+
Sbjct: 486 AM 487
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 91/167 (54%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
PN + +N +I +LCK + V+ A +F M ++ P TY TL+ G C +++ AV
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
LL+EM + +P + +N L+D L K+G + ++ M +G PN VTYN+L+ G C
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
L +++K + M + P+ +Y +ING K + +A+ LL
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR----ISPTVITYNTLIFG 67
R + + +V +N++++ + + L + + +V ISP +++N +I
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKA 196
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C + ++ A+ + M + PD T+ TL+D L KE R+ EA +L M EG P+
Sbjct: 197 LCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
V YN L+DG C ++ + + + M P+ +Y+ +I+G C +D+A++LL+
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 188 H 188
Sbjct: 317 R 317
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK---RISPT 57
+G + A+ + ++ +P+ V Y++II LC ++ A L+ EM+ + + P
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 58 VITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALS-KEGRVKEAKNVL 116
V+TYN L+ G C+ + AV LLN M+ + +PDVIT NT ++ LS K + ++ L
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
++ K V+ G C + EV M + P ++++++ CK
Sbjct: 600 EELVVRLLKRQRVS------GACTIVEV---------MLGKYLAPKTSTWAMIVREICKP 644
Query: 177 KMVDEALN 184
K ++ A++
Sbjct: 645 KKINAAID 652
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 22/118 (18%)
Query: 91 PD--VITFNTLVDALSKEGRVKEAKNVLAVMIKEGE--------------------KPNV 128
PD V F+ +VD + VK +VL V+I EG PN
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++N ++ C ++ V++ ++F M + + PD ++Y +++G CK + +DEA+ LL
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 95/167 (56%), Gaps = 8/167 (4%)
Query: 15 QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQM 74
QG S PNVV Y +I LC+D + +A+ ++ +++ + + P+++TY++LI GFC G +
Sbjct: 385 QGIS--PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 75 EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSL 134
+ L +M+ PDV+ + LVD LSK+G + A M+ + + NVV +NSL
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 135 MDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSY------SIMINGFCK 175
+DG+C + ++ +F M + PDV ++ SIM + FCK
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 5/207 (2%)
Query: 3 HTRP--ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H +P LQL +Q ++ + N +I L K + DA F+ ++ ++ P ++T
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT+I G+C + +++ A + + + P+ +T L+ L K + A + ++M
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G KPN VTY LMD + ++ + +F M + ++P + SYSI+I+G CK VD
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 181 EALNLLKHPILYWML---YAKAIMLTG 204
EA N+ I +L A AI++ G
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRG 756
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 101/184 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L + ++ + +P+++ Y+T+ID K ++ + LFS+ + K + V+ +
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ I + G + A + M+ + I+P+V+T+ L+ L ++GR+ EA + ++K
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P++VTY+SL+DG+C + ++ M +M PDV Y ++++G K ++
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 182 ALNL 185
A+
Sbjct: 480 AMRF 483
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
I+GK +P++V YNT+I C + +++A +F + P +T LI C
Sbjct: 599 IEGK-MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
M+ A+ + + M K P+ +T+ L+D SK ++ + + M ++G P++V+Y+
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
++DG C V++ +IF+ ++ PDV +Y+I+I G+CK+ + EA L +H
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 772
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 90/169 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL + PNVV + T+I+ CK ++ A++LF M + I P +I Y+TLI
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+ G + L ++ + K + DV+ F++ +D K G + A V M+ +G P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
NVVTY L+ G C + + ++ + + + P + +YS +I+GFCK
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL R + + + +V N ++ L D+ + A L S ++ +P V+T+
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTF 289
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TLI GFC G+M+ A L M + I PD+I ++TL+D K G + + + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G K +VV ++S +D Y ++ ++ M ++P+V +Y+I+I G C+ + E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 182 ALNL 185
A +
Sbjct: 410 AFGM 413
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN V +I LCK+ ++ A +FS M K P +TY L+ F +E + L
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
EM K I+P +++++ ++D L K GRV EA N+ I P+VV Y L+ GYC
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 141 VKEVNKTKDIFNTMTQMEVTPD 162
V + + ++ M + V PD
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPD 781
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++ ++ G+S + NVV++N++ID C+ ++A +F M I P V T+ T++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM- 538
Query: 67 GFCIVGQMEAAVC----------LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
V ME A C L + M I+ D+ N ++ L K R+++A
Sbjct: 539 ---RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+I+ +P++VTYN+++ GYC ++ +++ + IF + P+ + +I+I+ CK
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 177 KMVDEALNLL 186
+D A+ +
Sbjct: 656 NDMDGAIRMF 665
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 68/121 (56%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+++ + K ++PN V Y ++D K + ++ LF EM K ISP++++Y+ +I
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+++ A + ++ + + PDV+ + L+ K GR+ EA + M++ G KP
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 127 N 127
+
Sbjct: 781 D 781
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 5/207 (2%)
Query: 3 HTRP--ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
H +P LQL +Q ++ + N +I L K + DA F+ ++ ++ P ++T
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT+I G+C + +++ A + + + P+ +T L+ L K + A + ++M
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G KPN VTY LMD + ++ + +F M + ++P + SYSI+I+G CK VD
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 181 EALNLLKHPILYWML---YAKAIMLTG 204
EA N+ I +L A AI++ G
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRG 785
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
Query: 15 QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQM 74
QG S PNVV Y +I LC+D + +A+ ++ +++ + + P+++TY++LI GFC G +
Sbjct: 385 QGIS--PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 75 EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSL 134
+ L +M+ PDV+ + LVD LSK+G + A M+ + + NVV +NSL
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 135 MDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+DG+C + ++ +F M + PDV +++ ++ ++EAL L
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 101/184 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L + ++ + +P+++ Y+T+ID K ++ + LFS+ + K + V+ +
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ I + G + A + M+ + I+P+V+T+ L+ L ++GR+ EA + ++K
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P++VTY+SL+DG+C + ++ M +M PDV Y ++++G K ++
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 182 ALNL 185
A+
Sbjct: 480 AMRF 483
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
I+GK +P++V YNT+I C + +++A +F + P +T LI C
Sbjct: 628 IEGK-MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
M+ A+ + + M K P+ +T+ L+D SK ++ + + M ++G P++V+Y+
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
++DG C V++ +IF+ ++ PDV +Y+I+I G+CK+ + EA L +H
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 801
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 90/169 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL + PNVV + T+I+ CK ++ A++LF M + I P +I Y+TLI
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+ G + L ++ + K + DV+ F++ +D K G + A V M+ +G P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
NVVTY L+ G C + + ++ + + + P + +YS +I+GFCK
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + QI + +P++V Y+++ID CK + + L+ +M+ P V+ Y
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G G M A+ +M+ +SI +V+ FN+L+D + R EA V +M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
G KP+V T+ ++M + + + +F M +M + PD +Y +I+ FCK
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ R L + P+VV+Y ++D L K L+ A +M+ + I V+ +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI G+C + + + A+ + M + I PDV TF T++ EGR++EA + M K
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 122 EGEKPNVVTYNSLMDGYC--------------------------------LVKEVNKTKD 149
G +P+ + Y +L+D +C L+ + ++ +D
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 150 ---IFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
FN + + ++ PD+ +Y+ MI G+C ++ +DEA
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 1/184 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL R + + + +V N ++ L D+ + A L S ++ +P V+T+
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTF 289
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TLI GFC G+M+ A L M + I PD+I ++TL+D K G + + + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G K +VV ++S +D Y ++ ++ M ++P+V +Y+I+I G C+ + E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 182 ALNL 185
A +
Sbjct: 410 AFGM 413
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 72/142 (50%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN V +I LCK+ ++ A +FS M K P +TY L+ F +E + L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
EM K I+P +++++ ++D L K GRV EA N+ I P+VV Y L+ GYC
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 141 VKEVNKTKDIFNTMTQMEVTPD 162
V + + ++ M + V PD
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPD 810
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++ ++ G+S + NVV++N++ID C+ ++A +F M I P V T+ T++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKE-------------------- 106
+ G++E A+ L M + PD + + TL+DA K
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 107 ---------------GRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
R+++A +I+ +P++VTYN+++ GYC ++ +++ + IF
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ P+ + +I+I+ CK +D A+ +
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 68/121 (56%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+++ + K ++PN V Y ++D K + ++ LF EM K ISP++++Y+ +I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+++ A + ++ + + PDV+ + L+ K GR+ EA + M++ G KP
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Query: 127 N 127
+
Sbjct: 810 D 810
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 6/183 (3%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V + +ID++C K + +A L S++ P YNT++ GFC + + AV
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ +M + + PD IT+NTL+ LSK GRV+EA+ L M+ G +P+ TY SLM+G C
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWMLYAKA 199
E + M P+ +Y+ +++G CK +++D+ + LY M+ +
Sbjct: 347 RKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME------LYEMMKSSG 400
Query: 200 IML 202
+ L
Sbjct: 401 VKL 403
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R A+ L+ ++ +P+ +YNTI+ C ++A ++ +M + + P ITYNTL
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
IFG G++E A L MV PD T+ +L++ + ++G A ++L M G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC 366
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
PN TYN+L+ G C + ++K +++ M V + Y+ ++ K V EA
Sbjct: 367 APNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE 426
Query: 185 LLKHPI 190
+ + +
Sbjct: 427 VFDYAV 432
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVIT 60
G A L++++ K + P+ YN ++ LCK K ++ Y EM + P +++
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ LI C + A+ L++++ PD +NT++ + EA V M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+EG +P+ +TYN+L+ G V + + TM PD +Y+ ++NG C+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 181 EALNLLKH 188
AL+LL+
Sbjct: 353 GALSLLEE 360
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 7 ALQLLRQIQGKSAQP-NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR--ISPTVITYNT 63
A L I S P ++ +N+++ S +VND LF ++ + P T+
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 64 LIFGFCIV--GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ C + +LN MV + PD +T + V +L + GRV EAK+++ + +
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMT-QMEVTPDVWSYSIMINGFCKIKMVD 180
+ P+ TYN L+ C K+++ + + M +V PD+ S++I+I+ C K +
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 181 EALNLL 186
EA+ L+
Sbjct: 248 EAMYLV 253
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ + ++++ + +P+ + YNT+I L K V +A MV P TY +L+
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+ A+ LL EM + P+ T+NTL+ L K + + + +M G K
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
Y +L+ +V + ++F+ + D +YS +
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L+ + +P+ Y ++++ +C+ A +L EM + +P TY
Sbjct: 314 GRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTY 373
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTL+ G C M+ + L M + + + TLV +L K G+V EA V +
Sbjct: 374 NTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVD 433
Query: 122 EGEKPNVVTYNSL 134
+ Y++L
Sbjct: 434 SKSLSDASAYSTL 446
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A R + + + Y +++ L K+ V+DA +F EM K I+P V +Y
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI GF +G M+ A + +EMV + + P+VI +N L+ + G +++AK +L M
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN VTY +++DGYC ++ + +F+ M + PD + Y+ +++G C++ V+
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 182 ALNLL 186
A+ +
Sbjct: 751 AITIF 755
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 4/183 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++ R+++GK P+V Y +I+ K + A ++F EMV + ++P VI YN L+
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC G++E A LL+EM +K ++P+ +T+ T++D K G + EA + M +G P
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVP 730
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN---GFCKIKMVDEAL 183
+ Y +L+DG C + +V + IF T + ++ +IN F K ++ E L
Sbjct: 731 DSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 184 NLL 186
N L
Sbjct: 790 NRL 792
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 97/182 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + +++++ PN V+ +I+ CK V +A + + MV + I TY L+
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G +++ A + EM K I PDV ++ L++ SK G +++A ++ M++EG P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NV+ YN L+ G+C E+ K K++ + M+ + P+ +Y +I+G+CK + EA L
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 187 KH 188
Sbjct: 721 DE 722
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
+ R +LL +++ ++ + Y T++ +C ++ AYN+ EM+ P V+ Y
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
TLI F + A+ +L EM + I PD+ +N+L+ LSK R+ EA++ L M++
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
G KPN TY + + GY E M + V P+ + +IN +CK V EA
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+++L++++ + P++ YN++I L K K +++A + EMV + P TY I
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+ + +A + EM + P+ + L++ K+G+V EA + M+ +G
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI---------- 176
+ TY LM+G +V+ ++IF M + PDV+SY ++INGF K+
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 177 -KMVDEALNLLKHPILYWML 195
+MV+E L + I+Y ML
Sbjct: 651 DEMVEEGLT--PNVIIYNML 668
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL ++ K PN V Y TIID CK + +A+ LF EM K + P Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 62 NTLIFGFCIVGQMEAAVCL----------------------------------LNEMVLK 87
TL+ G C + +E A+ + LN ++
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 88 SIN----PDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
S + P+ +T+N ++D L KEG ++ AK + M P V+TY SL++GY +
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ +F+ + PD YS++IN F K M +AL L+
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ + A + ++ + PNV++YN ++ C+ + A L EM K + P +T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV-- 118
Y T+I G+C G + A L +EM LK + PD + TLVD + V+ A +
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK 759
Query: 119 ----------------MIKEGE--------------------KPNVVTYNSLMDGYCLVK 142
+ K G+ KPN VTYN ++D C
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 143 EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
+ K++F+ M + P V +Y+ ++NG+ K+ E + I
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P Y ++I+ C++K V Y L EM + I + TY T++ G C G ++ A +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+ EM+ P+V+ + TL+ + R +A VL M ++G P++ YNSL+ G
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
K +++ + M + + P+ ++Y I+G+
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+L + K P Y+ +ID LCK K + DA +L EM + +S TY+ LI
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G +AA L++EMV IN ++ + +SKEG +++AK + MI G P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
Y SL++GYC K V + ++ M + + ++Y ++ G C +D A N++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 187 KHPI 190
K I
Sbjct: 441 KEMI 444
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 1 MGHTRPALQLLRQIQGKS----AQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
G T ++L ++ S +PN V YN +ID LCK+ + A LF +M + P
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
TVITY +L+ G+ +G+ + +E + I PD I ++ +++A KEG +A ++
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Query: 117 AVM-----IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
M + +G K ++ T +L+ G+ V E+ + + M +++ PD + +IN
Sbjct: 899 DQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Query: 172 GFC 174
C
Sbjct: 959 ESC 961
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
MY+ I + K+ ++ A LF M+ + P Y +LI G+C + LL EM
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
++I T+ T+V + G + A N++ MI G +PNVV Y +L+ +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ M + + PD++ Y+ +I G K K +DEA + L
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A+ + G P + ++D+L + ++ ++++ MV + + V TY
Sbjct: 165 GYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI C G ++ L + VL + T VD K +KE+ MI
Sbjct: 225 HMLIIAHCRAGNVQ-----LGKDVLFKTEKEFRTATLNVDGALK---LKES------MIC 270
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P TY+ L+DG C +K + K + M + V+ D +YS++I+G K + D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 182 ALNLLKH 188
A L+
Sbjct: 331 AKGLVHE 337
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 11 LRQIQGKSA-QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L+ + GKS QPNVV +NT+I C+ + +A +F EM ++P +TYNTLI G+
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G E A +MV I D++T+N L+ L K+ + ++A + + KE PN
Sbjct: 355 QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
T+++L+ G C+ K ++ +++ +M + P+ +++++++ FC+ + D A +L+
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ++LL+ ++ + V YNT+I C+ L++ A L + M + P V+T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC +++ A + EM ++ P+ +T+NTL++ S++G + A M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G + +++TYN+L+ G C + K + + + P+ ++S +I G C K D
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 182 ALNLLK 187
L K
Sbjct: 432 GFELYK 437
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+ R+++ PN N ++ C+ ++ L +M T ++Y
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI G C G + +A+ L N M + P+V+TFNTL+ + +++EA V M
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PN VTYN+L++GY + + M + D+ +Y+ +I G CK +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 182 ALNLLK 187
A +K
Sbjct: 397 AAQFVK 402
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R A Q++ P V N + SL V+ A + EM +ISP T N +
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMV 244
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ G+C G+++ + LL +M +++NTL+ ++G + A + +M K G
Sbjct: 245 MSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+PNVVT+N+L+ G+C ++ + +F M + V P+ +Y+ +ING+ +
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ 355
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 79/158 (50%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+++++ + K +A + F +M PTV + N + G+++ A+ EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
I+P+ T N ++ + G++ + +L M + G + V+YN+L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ + N M + + P+V +++ +I+GFC+ + EA
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
TR A Q ++++ ++ PN ++ +I C K + + L+ M+ P T+N
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
L+ FC + A +L EMV +SI D T + + + L +G+ + K +L M EG
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM--EG 511
Query: 124 EK 125
+K
Sbjct: 512 KK 513
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
Q +++ YN +I LCK A E+ + + P T++ LI G C+ +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
L M+ +P+ TFN LV A + A VL M++
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Query: 11 LRQIQGKSA-QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L+ + GKS QPNVV +NT+I C+ + +A +F EM ++P +TYNTLI G+
Sbjct: 295 LKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYS 354
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G E A +MV I D++T+N L+ L K+ + ++A + + KE PN
Sbjct: 355 QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
T+++L+ G C+ K ++ +++ +M + P+ +++++++ FC+ + D A +L+
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ++LL+ ++ + V YNT+I C+ L++ A L + M + P V+T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GFC +++ A + EM ++ P+ +T+NTL++ S++G + A M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G + +++TYN+L+ G C + K + + + P+ ++S +I G C K D
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 182 ALNLLK 187
L K
Sbjct: 432 GFELYK 437
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+ R+++ PN N ++ C+ ++ L +M T ++Y
Sbjct: 217 GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY 276
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI G C G + +A+ L N M + P+V+TFNTL+ + +++EA V M
Sbjct: 277 NTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PN VTYN+L++GY + + M + D+ +Y+ +I G CK +
Sbjct: 337 VNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRK 396
Query: 182 ALNLLK 187
A +K
Sbjct: 397 AAQFVK 402
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R A Q++ P V N + SL V+ A + EM +ISP T N +
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMV 244
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ G+C G+++ + LL +M +++NTL+ ++G + A + +M K G
Sbjct: 245 MSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL 304
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+PNVVT+N+L+ G+C ++ + +F M + V P+ +Y+ +ING+ +
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQ 355
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 79/158 (50%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+++++ + K +A + F +M PTV + N + G+++ A+ EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
I+P+ T N ++ + G++ + +L M + G + V+YN+L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ + N M + + P+V +++ +I+GFC+ + EA
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
TR A Q ++++ ++ PN ++ +I C K + + L+ M+ P T+N
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
L+ FC + A +L EMV +SI D T + + + L +G+ + K +L M EG
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM--EG 511
Query: 124 EK 125
+K
Sbjct: 512 KK 513
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
Q +++ YN +I LCK A E+ + + P T++ LI G C+ +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
L M+ +P+ TFN LV A + A VL M++
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 97/172 (56%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K P+V ++ T I++ CK V +A LFS+M ++P V+T+NT+I G + G+ +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A +MV + + P +IT++ LV L++ R+ +A VL M K+G PNV+ YN+L+D
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ +NK +I + M ++ +Y+ +I G+CK D A LLK
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 97/186 (52%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
M A+Q + P+V Y+ +ID CK + + F EM++K + P +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI +C G++ A+ L +M K I+P+ T+ +L+ +S RV+EAK + M
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
EG +PNV Y +L+DGY + ++ K + + M V P+ +Y++MI G+ + V
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 181 EALNLL 186
EA LL
Sbjct: 768 EASRLL 773
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
T + ++ K+ QPN V+YN +I + C+ ++ A L +M K ISP TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
+LI G I+ ++E A L EM ++ + P+V + L+D K G++ + + +L M +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
PN +TY ++ GY V + + N M + + PD +Y I G+ K V EA
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Query: 183 L 183
Sbjct: 805 F 805
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++L +++ PNVV +NT+ID L ++A+ +MV + + PT+ITY
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ L+ G ++ A +L EM K P+VI +N L+D+ + G + +A + +M+
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G TYN+L+ GYC + + + + M + + S++ +I C M D
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 182 ALNLLKHPILYWMLYAKAIMLT 203
AL + +L M ++ T
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTT 475
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ ++I G+ + V YNT+I C K +++A+ EMV + + P TY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI G + ++E A+ ++ + PDV T++ ++D K R +E + M+
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ +PN V YN L+ YC ++ ++ M ++P+ +Y+ +I G I V+E
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 182 A 182
A
Sbjct: 699 A 699
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L Q K + N ++ LC+ +++A+ + E++ + ++Y
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI G C +++ A L+EMV + + PD T++ L+ L +V+EA +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+V TY+ ++DG C + + ++ F+ M V P+ Y+ +I +C+ +
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 182 ALNL---LKH 188
AL L +KH
Sbjct: 664 ALELREDMKH 673
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L ++ K PN Y ++I + V +A LF EM + + P V Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI G+ +GQM CLL EM K+++P+ IT+ ++ +++G V EA +L M +
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 122 EGEKPNVVTYNSLMDGY 138
+G P+ +TY + GY
Sbjct: 779 KGIVPDSITYKEFIYGY 795
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL + + K P+ N ++ SL + F ++V K +SP V + T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC G++E AV L ++M + P+V+TFNT++D L GR EA M++ G +P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++TY+ L+ G K + + MT+ P+V Y+ +I+ F + +++A+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+ + ++ ++ P + T+I LCK + A L+ + + K T N L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+++ A + E++ + D +++NTL+ + ++ EA L M+K G KP
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ TY+ L+ G + +V + ++ + + PDV++YS+MI+G CK + +E
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L+++ K PNV++YN +IDS + +N A + MV+K +S T TYNTLI
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 67 GFCIVGQMEAA----------------------VCLL-------------NEMVLKSINP 91
G+C GQ + A +CLL EM+L++++P
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 92 DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
TL+ L K G+ +A + + +G + T N+L+ G C ++++ I
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWML---YAKAIMLTGQF 206
+ D SY+ +I+G C K +DEA L + + Y +I++ G F
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 42 AYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD 101
A ++F + K + P+ T N L+ + + C ++V K ++PDV F T ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAIN 268
Query: 102 ALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
A K G+V+EA + + M + G PNVVT+N+++DG + ++ M + + P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 162 DVWSYSIMINGFCKIKMVDEALNLLKH 188
+ +YSI++ G + K + +A +LK
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKE 355
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ + +P ++ Y+ ++ L + K + DAY + EM K P VI Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI F G + A+ + + MV K ++ T+NTL+ K G+ A+ +L M+
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N ++ S++ C + M ++P + +I+G CK +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 182 ALNL 185
AL L
Sbjct: 489 ALEL 492
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVT---------------------------------- 51
YNT+I CK+ ++A L EM++
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 52 -KRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVK 110
+ +SP TLI G C G+ A+ L + + K D T N L+ L + G++
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 111 EAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
EA + ++ G + V+YN+L+ G C K++++ + M + + PD ++YSI+I
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 171 NGFCKIKMVDEALNLLKHPILYWML---YAKAIMLTG 204
G + V+EA+ ML Y ++M+ G
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 97/172 (56%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K P+V ++ T I++ CK V +A LFS+M ++P V+T+NT+I G + G+ +
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A +MV + + P +IT++ LV L++ R+ +A VL M K+G PNV+ YN+L+D
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ +NK +I + M ++ +Y+ +I G+CK D A LLK
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 97/186 (52%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
M A+Q + P+V Y+ +ID CK + + F EM++K + P +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI +C G++ A+ L +M K I+P+ T+ +L+ +S RV+EAK + M
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
EG +PNV Y +L+DGY + ++ K + + M V P+ +Y++MI G+ + V
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 181 EALNLL 186
EA LL
Sbjct: 768 EASRLL 773
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
T + ++ K+ QPN V+YN +I + C+ ++ A L +M K ISP TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
+LI G I+ ++E A L EM ++ + P+V + L+D K G++ + + +L M +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
PN +TY ++ GY V + + N M + + PD +Y I G+ K V EA
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Query: 183 L 183
Sbjct: 805 F 805
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++L +++ PNVV +NT+ID L ++A+ +MV + + PT+ITY
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ L+ G ++ A +L EM K P+VI +N L+D+ + G + +A + +M+
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G TYN+L+ GYC + + + + M + + S++ +I C M D
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 182 ALNLLKHPILYWMLYAKAIMLT 203
AL + +L M ++ T
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTT 475
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ ++I G+ + V YNT+I C K +++A+ EMV + + P TY
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI G + ++E A+ ++ + PDV T++ ++D K R +E + M+
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ +PN V YN L+ YC ++ ++ M ++P+ +Y+ +I G I V+E
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 182 A 182
A
Sbjct: 699 A 699
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L Q K + N ++ LC+ +++A+ + E++ + ++Y
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI G C +++ A L+EMV + + PD T++ L+ L +V+EA +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+V TY+ ++DG C + + ++ F+ M V P+ Y+ +I +C+ +
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 182 ALNL---LKH 188
AL L +KH
Sbjct: 664 ALELREDMKH 673
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L ++ K PN Y ++I + V +A LF EM + + P V Y
Sbjct: 659 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI G+ +GQM CLL EM K+++P+ IT+ ++ +++G V EA +L M +
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Query: 122 EGEKPNVVTYNSLMDGY 138
+G P+ +TY + GY
Sbjct: 779 KGIVPDSITYKEFIYGY 795
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 1/179 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL + + K P+ N ++ SL + F ++V K +SP V + T I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC G++E AV L ++M + P+V+TFNT++D L GR EA M++ G +P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++TY+ L+ G K + + MT+ P+V Y+ +I+ F + +++A+ +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 91/176 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+ + ++ ++ P + T+I LCK + A L+ + + K T N L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+++ A + E++ + D +++NTL+ + ++ EA L M+K G KP
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ TY+ L+ G + +V + ++ + + PDV++YS+MI+G CK + +E
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L+++ K PNV++YN +IDS + +N A + MV+K +S T TYNTLI
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 67 GFCIVGQMEAA----------------------VCLL-------------NEMVLKSINP 91
G+C GQ + A +CLL EM+L++++P
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 92 DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
TL+ L K G+ +A + + +G + T N+L+ G C ++++ I
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWML---YAKAIMLTGQF 206
+ D SY+ +I+G C K +DEA L + + Y +I++ G F
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 42 AYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD 101
A ++F + K + P+ T N L+ + + C ++V K ++PDV F T ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC-CEAFDVVCKGVSPDVYLFTTAIN 268
Query: 102 ALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
A K G+V+EA + + M + G PNVVT+N+++DG + ++ M + + P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 162 DVWSYSIMINGFCKIKMVDEALNLLKH 188
+ +YSI++ G + K + +A +LK
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKE 355
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ + +P ++ Y+ ++ L + K + DAY + EM K P VI Y
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI F G + A+ + + MV K ++ T+NTL+ K G+ A+ +L M+
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N ++ S++ C + M ++P + +I+G CK +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 182 ALNL 185
AL L
Sbjct: 489 ALEL 492
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVT---------------------------------- 51
YNT+I CK+ ++A L EM++
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 52 -KRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVK 110
+ +SP TLI G C G+ A+ L + + K D T N L+ L + G++
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 111 EAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
EA + ++ G + V+YN+L+ G C K++++ + M + + PD ++YSI+I
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 171 NGFCKIKMVDEALNLLKHPILYWML---YAKAIMLTG 204
G + V+EA+ ML Y ++M+ G
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ L +++ K Q ++ +I LCK+ +N+ Y +F M+ K P V Y LI G
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+ G +E A+ LL+ M+ + PDV+T++ +V+ L K GRV+EA + +G N
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ Y+SL+DG V++ + +F M++ T D + Y+ +I+ F K + VDEA+ L K
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 188 H----PILYWMLYAKAIMLTGQF 206
+Y I+L+G F
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMF 514
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 35/219 (15%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G L + R+++ +P + YN +++ L V+ A +F M + RI P ++T
Sbjct: 200 LGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVT 259
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA------------------ 102
YNT+I G+C GQ + A+ L +M + D IT+ T++ A
Sbjct: 260 YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 103 -----------------LSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
L KEG++ E V MI++G KPNV Y L+DGY V
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
+ + M PDV +YS+++NG CK V+EAL+
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T+ A++ LR ++ + + + + Y T+I + D L+ EM K I +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ +I G C G++ + M+ K P+V + L+D +K G V++A +L MI
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
EG KP+VVTY+ +++G C V + D F+T + + YS +I+G K VDE
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 182 ALNLLKH 188
A L +
Sbjct: 451 AERLFEE 457
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++LL ++ + +P+VV Y+ +++ LCK+ V +A + F ++ + Y
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM-I 120
++LI G G+++ A L EM K D +N L+DA +K +V EA + M
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+EG V TY L+ G + +++ M +TP + + G C V
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVA 555
Query: 181 EALNLL 186
A +L
Sbjct: 556 RACKIL 561
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 35/203 (17%)
Query: 23 VVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLN 82
V N +I S K +V + ++ +M I PT+ TYN L+ G +++A +
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 83 EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSL-------- 134
M I PD++T+NT++ K G+ ++A L M G + + +TY ++
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 135 -----------MD----------------GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS 167
MD G C ++N+ +F M + P+V Y+
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 168 IMINGFCKIKMVDEALNLLKHPI 190
++I+G+ K V++A+ LL I
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMI 389
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N+ Y +++D L K V+ + SE+ TV N LI F +G +E + +
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+M I P + T+N L++ L V A+ V VM KP++VTYN+++ GYC
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
+ K + M D +Y MI
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 7 ALQLLRQIQGKSA-QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLI 65
A+ L ++++ + V Y ++ + K+ +A L+ M+ K I+PT + L
Sbjct: 486 AIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALS 545
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
G C+ G++ A +L+E+ + D +++ L K GR+KEA + + + G +
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERGRE 604
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 103/189 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + A +L + + PN YN ++ + C + ++ AY LF +M+ + + P V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI GFC GQ+ A+ LL++M+ K PD +++ TL+++L ++ +++EA +L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P++V YN+++ G+C + + + M +P+ SY +I G C M DE
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 182 ALNLLKHPI 190
L+ I
Sbjct: 349 GKKYLEEMI 357
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A QL ++ + P+V Y +I C+ VN A L +M+ K P ++Y TL+
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C Q+ A LL M LK NPD++ +NT++ +E R +A+ VL M+ G P
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N V+Y +L+ G C ++ K M +P + ++ GFC V+EA +++
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 388
Query: 187 K 187
+
Sbjct: 389 E 389
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++LL + K P+ + Y T+++SLC+ + +AY L M K +P ++ Y
Sbjct: 239 GQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY 298
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NT+I GFC + A +L++M+ +P+ +++ TL+ L +G E K L MI
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVT--PDVW 164
+G P+ N L+ G+C +V + D+ + + T D W
Sbjct: 359 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTW 403
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R A +LL +++ K P++V YNT+I C++ DA + +M++ SP ++Y TL
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G C G + L EM+ K +P N LV G+V+EA +V+ V++K GE
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
+ T+ ++ C E K K + E+T D
Sbjct: 397 TLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 435
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 75 EAAVCLLNEMVLKSINPDVITFNTLVDAL-SKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
E + +M+ + P N ++D L S G +++A + G PN +YN
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
LM +CL +++ +F M + +V PDV SY I+I GFC+ V+ A+ LL
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 99/167 (59%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+VV +++II+ LCK V + L EM + P +TY TL+ A+ L
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
++MV++ I D++ + L+D L K G ++EA+ +++++ + PNVVTY +L+DG C
Sbjct: 317 YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+++ + I M + V P+V +YS MING+ K M++EA++LL+
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 9/193 (4%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G T+ A ++ ++ + P+ V +N+++ V A + +S M+ ISP V T
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT+I G G ++ L+EM + + PD T+N L+ +K G +K + + MI
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G P TYN L+ + V ++ + +++ M + V+P+ +Y MI+G CK
Sbjct: 811 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK----- 865
Query: 181 EALNLLKHPILYW 193
L HP + W
Sbjct: 866 ----LCTHPDVEW 874
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 94/179 (52%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
LLR+++ S PN V Y T++DSL K + A L+S+MV + I ++ Y L+ G
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G + A ++ + P+V+T+ LVD L K G + A+ ++ M+++ PNVV
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
TY+S+++GY + + + M V P+ ++Y +I+G K + A+ L K
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKE 459
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+ LLR + + V YNT+I LC+ L ++AY SEMV I P ++
Sbjct: 142 VGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVS 198
Query: 61 YNTLIFGFCIVGQMEAAVCLLNE----------------------------MVLKSINPD 92
YNTLI GFC VG A L++E MV+ +PD
Sbjct: 199 YNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPD 258
Query: 93 VITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFN 152
V+TF+++++ L K G+V E +L M + PN VTY +L+D +++
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 153 TMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
M + D+ Y+++++G K + EA K
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 96/163 (58%), Gaps = 8/163 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNL-FSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
P+ ++N++I + LV+D +L +S+M+ +SP V N LI FC VG++ A+
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
LL V I+ D +T+NT++ L + G EA L+ M+K G P+ V+YN+L+DG+C
Sbjct: 151 LLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFC 207
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
V + K + + ++++ ++ +++I+++ + + ++EA
Sbjct: 208 KVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAIEEA 246
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 87/164 (53%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+YNT+I +LCK + A + +M + P +T+N+L+ G+ + + A+ + M
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
+ I+P+V T+NT++ LS G +KE L+ M G +P+ TYN+L+ G + +
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ I+ M + P +Y+++I+ F + + +A LLK
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 843
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ +L Q+ PN+ Y +D+ K K + + +++ I + Y
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI C +G + A ++ +M + PD +TFN+L+ V++A + +VM++
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 122 EGEKPNVVTYNSLMDGYC---LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
G PNV TYN+++ G L+KEV+K + M + PD ++Y+ +I+G KI
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKW---LSEMKSRGMRPDDFTYNALISGQAKI 796
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 35/213 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A + + + + PNVV Y ++D LCK ++ A + ++M+ K + P V+TY
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA------------LSKE--- 106
+++I G+ G +E AV LL +M +++ P+ T+ T++D LSKE
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 107 --------------------GRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
GR+KE K ++ M+ +G + + Y SL+D + +
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 522
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
M + + DV SY+++I+G K V
Sbjct: 523 ALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 38/214 (17%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
+ ++ K +P++ +N +++S K L+ +M + I P++++ N ++ C
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 72 GQMEAAVCLLNEMVLKSINPDVIT-----------------------------------F 96
G+ME A+ +LN+M+L I+P++ T +
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 97 NTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ 156
NTL+ L K G K+A V+ M G P+ VT+NSLM GY + V K ++ M +
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 157 MEVTPDVWSYSIMINGFCK---IKMVDEALNLLK 187
++P+V +Y+ +I G IK VD+ L+ +K
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK-------------------------- 35
G A+ LLR+++ ++ PN Y T+ID L K
Sbjct: 413 GMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYIL 472
Query: 36 DKLVN---------DAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
D LVN + L +MV+K ++ I Y +LI F G EAA+ EM
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE 532
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ + DV+++N L+ + K G+V A M ++G +P++ T+N +M+ +
Sbjct: 533 RGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEG 591
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPIL 191
+++ M + P + S +I++ C+ ++EA+++L +L
Sbjct: 592 ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + L++ + K + + Y ++ID K A EM + + V++
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI G G++ A M K I PD+ TFN ++++ K+G + + M
Sbjct: 542 YNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G KP++++ N ++ C ++ + I N M ME+ P++ +Y I ++ K K D
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 660
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
+Q + +VV YN +I + K V + + M K I P + T+N ++ G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
E + L ++M I P +++ N +V L + G+++EA ++L M+ PN+ TY
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+D K + T+ + Y+ +I CK+ M +A
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKA 697
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A L ++ QP Y ++I LC+ +A LF ++V K + P ++
Sbjct: 411 GDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMM 470
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTL+ G C +G M+ A LL EM + SINPD +T+N L+ L EG+ +EA+ ++ M +
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G KP+ ++YN+L+ GY + + + M + P + +Y+ ++ G K + +
Sbjct: 531 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 182 ALNLLKH 188
A LL+
Sbjct: 591 AEELLRE 597
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
TR A +L ++ GK +P++VM NT++D C ++ A++L EM I+P +TYN
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
L+ G C G+ E A L+ EM + I PD I++NTL+ SK+G K A V M+ G
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
P ++TYN+L+ G +E +++ M + P+ S+ +I
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P YNT+I L + + A L E+ K I +TYN LI G+C G + A L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+EM+ I P T+ +L+ L ++ + +EA + ++ +G KP++V N+LMDG+C
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +++ + M M + PD +Y+ ++ G C +EA L+
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L+R+I+ K + V YN +I+ C+ A+ L EM+T I PT TY +LI+ C
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+ A L ++V K + PD++ NTL+D G + A ++L M P+ V
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK-------IKMVDEA 182
TYN LM G C + + +++ M + + PD SY+ +I+G+ K + DE
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 183 LNLLKHPIL 191
L+L +P L
Sbjct: 564 LSLGFNPTL 572
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+ ++++ ++ C+ ++V++A F M K P T N ++ + ++E A
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+M I +V TFN +++ L KEG++K+AK L +M G KP +VTYN+L+ G+ L
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + I + M PD+ +Y+ +++ C E L +K
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKE 320
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++ ++ K P N I+ L + + +A+ +++M I V T+N +I
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 233
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G+++ A L M + I P ++T+NTLV S GR++ A+ +++ M +G +P
Sbjct: 234 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
++ TYN ++ C + ++ M ++ + PD SY+I+I G
Sbjct: 294 DMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRG 336
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ A LL+++ S P+ V YN ++ LC + +A L EM + I P I+
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNTLI G+ G + A + +EM+ NP ++T+N L+ LSK + A+ +L M
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 121 KEGEKPNVVTYNSLMDG 137
EG PN ++ S+++
Sbjct: 600 SEGIVPNDSSFCSVIEA 616
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+ +++ + +P+ + YNT+I K A+ + EM++ +PT++TY
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALS 104
N L+ G + E A LL EM + I P+ +F ++++A+S
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 117/195 (60%), Gaps = 8/195 (4%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ + A++L ++++ K + +VV YNT++D K ++ A ++++MV+K I PT I+
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+ L+ C G + A + +EM+ K+I P V+ N+++ + G + ++ L MI
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME-----VTPDVWSYSIMINGFCK 175
EG P+ ++YN+L+ G+ V+E N +K F + +ME + PDV++Y+ +++GFC+
Sbjct: 613 SEGFVPDCISYNTLIYGF--VREENMSK-AFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 176 IKMVDEALNLLKHPI 190
+ EA +L+ I
Sbjct: 670 QNQMKEAEVVLRKMI 684
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A + ++I NV N ++++LCKD + S++ K + P ++T
Sbjct: 213 IGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNTLI + G ME A L+N M K +P V T+NT+++ L K G+ + AK V A M+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G P+ TY SL+ C +V +T+ +F+ M +V PD+ +S M++ F + +D
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 181 EAL 183
+AL
Sbjct: 393 KAL 395
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 97/176 (55%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L Q+Q K P++V YNT+I + L+ +A+ L + M K SP V TYNT+I G C
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G+ E A + EM+ ++PD T+ +L+ K+G V E + V + M P++V
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++S+M + ++K FN++ + + PD Y+I+I G+C+ M+ A+NL
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 98/184 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ AL ++ P+ V+Y +I C+ +++ A NL +EM+ + + V+TY
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NT++ G C + A L NEM +++ PD T L+D K G ++ A + M +
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ + +VVTYN+L+DG+ V +++ K+I+ M E+ P SYSI++N C + E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 182 ALNL 185
A +
Sbjct: 569 AFRV 572
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A ++ + K P + Y+ ++++LC + +A+ ++ EM++K I PTV+
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
N++I G+C G L +M+ + PD I++NTL+ +E + +A ++ M
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 121 KE--GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
+E G P+V TYNS++ G+C ++ + + + M + V PD +Y+ MINGF
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Query: 179 VDEALNL 185
+ EA +
Sbjct: 708 LTEAFRI 714
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L ++ ++ P+ +ID CK + +A LF +M KRI V+TYNTL+
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF VG ++ A + +MV K I P I+++ LV+AL +G + EA V MI + KP
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V+ NS++ GYC + + M PD SY+ +I GF + + + +A L+
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 187 K 187
K
Sbjct: 644 K 644
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 35/221 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+ + GK P V YNT+I+ LCK A +F+EM+ +SP TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEG----------RVKE 111
+L+ C G + + ++M + + PD++ F++++ ++ G VKE
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 112 A------------------KNVLAV-------MIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
A K +++V M+++G +VVTYN+++ G C K + +
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+FN MT+ + PD ++ +I+I+G CK+ + A+ L +
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 96/184 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L ++ + +VV YNTI+ LCK K++ +A LF+EM + + P T LI
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C +G ++ A+ L +M K I DV+T+NTL+D K G + AK + A M+ + P
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++Y+ L++ C + + +++ M + P V + MI G+C+ + + L
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 187 KHPI 190
+ I
Sbjct: 609 EKMI 612
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH A ++ ++ K+ +P V++ N++I C+ +D + +M+++ P I+Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLK--SINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
NTLI+GF M A L+ +M + + PDV T+N+++ ++ ++KEA+ VL M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
I+ G P+ TY +++G+ + + I + M Q +PD
Sbjct: 684 IERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 90/171 (52%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R A + ++ K ++ N +I SL + V A+ ++ E+ + V T N +
Sbjct: 182 REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIM 241
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ C G+ME L+++ K + PD++T+NTL+ A S +G ++EA ++ M +G
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
P V TYN++++G C + + K++F M + ++PD +Y ++ CK
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 89/174 (51%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
++ ++ + P++V +++++ + ++ A F+ + + P + Y LI G+
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C G + A+ L NEM+ + DV+T+NT++ L K + EA + M + P+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
T L+DG+C + + ++F M + + DV +Y+ +++GF K+ +D A
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 87/161 (54%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N +++ +I + + + + +A+ F+ + +K + ++ N LI +G +E A +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
E+ + +V T N +V+AL K+G++++ L+ + ++G P++VTYN+L+ Y
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ + ++ N M +P V++Y+ +ING CK + A
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 101/182 (55%), Gaps = 1/182 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++L + ++ +NTI+D LCK K V AY LF + R S +TY
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTY 198
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ G+C++ + A+ +L EMV + INP++ T+NT++ + G+++ A M K
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ +VVTY +++ G+ + E+ + +++F+ M + V P V +Y+ MI CK V+
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 182 AL 183
A+
Sbjct: 319 AV 320
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 100/184 (54%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
T AL++L+++ + PN+ YNT++ + + A+ F EM + V+TY T
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
++ GF + G+++ A + +EM+ + + P V T+N ++ L K+ V+ A + M++ G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
+PNV TYN L+ G E ++ +++ M P+ +Y++MI + + V++AL
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 184 NLLK 187
L +
Sbjct: 391 GLFE 394
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L R ++G+ + + V YN I++ C K A + EMV + I+P + TYNT++
Sbjct: 180 AYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLK 238
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF GQ+ A EM + DV+T+ T+V G +K A+NV MI+EG P
Sbjct: 239 GFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLP 298
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
+V TYN+++ C V +F M + P+V +Y+++I G
Sbjct: 299 SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 344
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A + +++ + + +VV Y T++ + A N+F EM+ + + P+V TY
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I C +E AV + EMV + P+V T+N L+ L G + ++ M
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
EG +PN TYN ++ Y EV K +F M + P++ +Y+I+I+G
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 2/169 (1%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS-PTVITYNTLIFGFCIVGQMEAAV 78
QPN ++N ++ CK+ +N A+ + EM IS P ITY+TL+ + + AV
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 79 CLLNEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
L +M+ K I+PD +TFN +++ + G V+ AK +L M K G PNV Y++LM+G
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+C V ++ + K F+ + + + D Y+ ++N FC+ DEA+ LL
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVITYNTLIFGFCIVGQMEAAVC 79
PN + Y+T++D L +A LF +M++K ISP +T+N +I GFC G++E A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+L+ M NP+V ++ L++ K G+++EAK + K G K + V Y +LM+ +C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
E ++ + M D +Y++++ G +EAL +L
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L ++ PNV Y+ +++ CK + +A F E+ + + Y
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGY 341
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TL+ FC G+ + A+ LL EM D +T+N ++ LS EGR +EA +L
Sbjct: 342 TTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGS 401
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
EG N +Y +++ C E+ K + M++ + P +++ ++ C+
Sbjct: 402 EGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCE 455
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 1 MGHTRP--ALQLLRQIQGKSA-QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPT 57
H+R A++L + K P+ V +N +I+ C+ V A + M +P
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 58 VITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLA 117
V Y+ L+ GFC VG+++ A +E+ + D + + TL++ + G EA +L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 118 VMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIK 177
M + + +TYN ++ G + + + V + SY I++N C
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Query: 178 MVDEALNLL 186
+++A+ L
Sbjct: 423 ELEKAVKFL 431
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 87/186 (46%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + A Q +++ + + V Y T+++ C++ ++A L EM R +T
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLT 375
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN ++ G G+ E A+ +L++ + ++ + ++ +++AL G +++A L+VM
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 435
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G P+ T+N L+ C + ++ + P S+ ++ CK + +
Sbjct: 436 ERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLV 495
Query: 181 EALNLL 186
LL
Sbjct: 496 HVFELL 501
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVITYNTLI 65
A++LL + K P+ V Y TI+ LCK+K + + +L +M + + P +TYNTLI
Sbjct: 331 AIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI 390
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE- 124
+ A+ L + K D + ++ +V AL KEGR+ EAK+++ M+ +G
Sbjct: 391 HMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHC 450
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
P+VVTY ++++G+C + EV+K K + M P+ SY+ ++NG C+ EA
Sbjct: 451 PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE 510
Query: 185 LLKHPILYW 193
++ +W
Sbjct: 511 MMNMSEEHW 519
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 37/223 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R AL++L +Q +PN+++ NT ID + + A M I P V+TY
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G+C + ++E A+ LL +M K PD +++ T++ L KE R+ E ++++ M K
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 122 E-GEKPNVVTYNSLMD----------------------------GY-------CLVKEVN 145
E G P+ VTYN+L+ GY C ++
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 146 KTKDIFNTM-TQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ KD+ N M ++ PDV +Y+ ++NGFC++ VD+A LL+
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++R++ K P V N ++ SLC+D ++A E + K + V+ +
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T+I GFC +++AA+ +L++M L + + DV T+ TLVD L K+GR+ EA ++ M+
Sbjct: 598 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH 657
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P VTY +++ YC + +V+ I M + + Y+ +I C + ++E
Sbjct: 658 KGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEE 715
Query: 182 ALNLL 186
A LL
Sbjct: 716 ADTLL 720
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 94/187 (50%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +LL+ + +PN V Y +++ +C+ +A + + SP IT
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+ ++ G G++ A ++ EMVLK P + N L+ +L ++GR EA+ + +
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G NVV + +++ G+C E++ + + M + DV++Y+ +++ K +
Sbjct: 587 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 181 EALNLLK 187
EA L+K
Sbjct: 647 EATELMK 653
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITY 61
H AL L+ Q K + + + Y+ I+ +LCK+ +++A +L +EM++K P V+TY
Sbjct: 398 HADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTY 457
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ GFC +G+++ A LL M P+ +++ L++ + + G+ EA+ ++ + +
Sbjct: 458 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE 517
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PN +TY+ +M G ++++ D+ M P ++++ C+ E
Sbjct: 518 HWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 577
Query: 182 ALNLLK 187
A ++
Sbjct: 578 ARKFME 583
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%)
Query: 24 VMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
++Y ++++ L K KL + + M + I T ++ ++ + GQ+ A+ +L
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
M + P+++ NT +D + R+++A L M G PNVVTYN ++ GYC +
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
V + ++ M PD SY ++ CK K + E +L+K
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
++ ++ S + + DA + + M + P ++ NT I F ++E A+ L M
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ I P+V+T+N ++ RV+EA +L M +G P+ V+Y ++M C K +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 146 KTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ +D+ M + + PD +Y+ +I+ K DEAL LK
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLK 407
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +L + + +V Y T++D+L K + +A L +M+ K I PT +TY T+I
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+C +G+++ V +L +M+ + + +N +++ L G+++EA +L +++ +
Sbjct: 673 RYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRS 730
Query: 127 NVVTYNSLMDGY 138
+ T +LM+GY
Sbjct: 731 DAKTCYALMEGY 742
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L++++ K P V Y T+I C+ V+D + +M++++ T+ Y
Sbjct: 643 GRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--Y 700
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I C++G++E A LL +++ + D T L++ K+G A V M
Sbjct: 701 NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFN 760
Query: 122 EGEKPNV 128
P+V
Sbjct: 761 RNLIPDV 767
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++R++ G+ P+ Y+ +++ LC + A+ LF EM + V TY
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ FC G +E A NEM P+V+T+ L+ A K +V A + M+
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD----------------VWS 165
EG PN+VTY++L+DG+C +V K IF M + PD V +
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 166 YSIMINGFCKIKMVDEALNLL 186
Y +++GFCK V+EA LL
Sbjct: 642 YGALLDGFCKSHRVEEARKLL 662
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI------------ 54
A +L + + PN+V Y+ +ID CK V A +F M +
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 55 ----SPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVK 110
P V+TY L+ GFC ++E A LL+ M ++ P+ I ++ L+D L K G++
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 111 EAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
EA+ V M + G + TY+SL+D Y VK + + + M + P+V Y+ MI
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 171 NGFCKIKMVDEALNLLK 187
+G CK+ DEA L++
Sbjct: 752 DGLCKVGKTDEAYKLMQ 768
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 106/181 (58%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL + + +PN ++Y+ +ID LCK +++A + +EM T+ TY++LI
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ V + + A +L++M+ S P+V+ + ++D L K G+ EA ++ +M ++G +P
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVVTY +++DG+ ++ ++ ++ M V P+ +Y ++I+ CK +D A NLL
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 187 K 187
+
Sbjct: 838 E 838
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%)
Query: 11 LRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCI 70
+Q S +PNVV Y ++D CK V +A L M + P I Y+ LI G C
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 71 VGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
VG+++ A + EM + T+++L+D K R A VL+ M++ PNVV
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 131 YNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
Y ++DG C V + ++ + M + P+V +Y+ MI+GF I ++ L LL+
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++L ++ S PNVV+Y +ID LCK ++AY L M K P V+TY +I
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF ++G++E + LL M K + P+ +T+ L+D K G + A N+L M +
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ Y +++G+ KE ++ + + + Q + P + Y ++I+ K + ++ AL LL
Sbjct: 848 HTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 187 K 187
+
Sbjct: 906 E 906
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N + ++ LC A+++ EM+ + P TY+ ++ C +ME A L
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
EM + DV T+ +VD+ K G +++A+ M + G PNVVTY +L+ Y
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
K+V+ ++F TM P++ +YS +I+G CK V++A + +
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDK------LVNDAYNLFSEMVTKRIS 55
G A +LL+++ P V+YN +I S+C DK L++ A +SEM+ +
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 56 PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNV 115
I ++ C G+ E A ++ EM+ + PD T++ +++ L +++ A +
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 116 LAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
M + G +V TY ++D +C + + + FN M ++ TP+V +Y+ +I+ + K
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 176 IKMVDEALNLLK 187
K V A L +
Sbjct: 566 AKKVSYANELFE 577
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y+++ID K K + A + S+M+ +P V+ Y +I G C VG+ + A L+ M
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
K P+V+T+ ++D G+++ +L M +G PN VTY L+D C ++
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ M Q Y +I GF K + E+L LL
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLL 870
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G T A +L++ ++ K QPNVV Y +ID + L M +K ++P +T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEM--------------VLKSINPDVI------------ 94
Y LI C G ++ A LL EM V++ N + I
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD 876
Query: 95 -------TFNTLVDALSKEGRVKEAKNVL-------AVMIKEGEKPNVVTYNSLMDGYCL 140
+ L+D L K R++ A +L A ++ TYNSL++ CL
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS-----TYNSLIESLCL 931
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL---KHPILYWM 194
+V +F+ MT+ V P++ S+ +I G + + EAL LL H + W+
Sbjct: 932 ANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQWI 988
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G R AL L ++ ++ P+ V Y +I LC+ L +A + + M P V+T
Sbjct: 283 VGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+TL+ G Q+ +LN M+++ P FN+LV A G A +L M+
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 121 KEGEKPNVVTYNSLMDGYCLVKE 143
K G P V YN L+ C K+
Sbjct: 400 KCGHMPGYVVYNILIGSICGDKD 422
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Query: 32 SLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINP 91
SLCK +A L T+ P + Y LI G C E A+ LN M S P
Sbjct: 279 SLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 92 DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
+V+T++TL+ + ++ K VL +M+ EG P+ +NSL+ YC + + +
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIK 177
M + P Y+I+I C K
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDK 421
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 3/164 (1%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+ L+QI+ + N ++ C++ + A + R P+ TYN LI F
Sbjct: 186 EFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF 245
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
++++A + EM L ++ D T +L K G+ +EA L ++ E P+
Sbjct: 246 LKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDT 302
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
V Y L+ G C + D N M P+V +YS ++ G
Sbjct: 303 VFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 346
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+ L +++ +P+ YN +I + K ++ A + EM + T +
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C VG+ A+ L+ ++ PD + + L+ L + +EA + L M P
Sbjct: 279 SLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVVTY++L+ G K++ + K + N M P ++ +++ +C A LL
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 187 K 187
K
Sbjct: 396 K 396
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 1/183 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + Q++ P+V YN ++D+ K +++ + L+ EM T IT+N +I
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 67 GFCIVGQMEAAVCLLNE-MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
G G ++ A+ L + M + +P T+ L+D LSK GR+ EAK + M+ G +
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
PN YN L++G+ E + +F M + V PD+ +YS++++ C + VDE L+
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 186 LKH 188
K
Sbjct: 984 FKE 986
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 105/186 (56%), Gaps = 1/186 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A++LL ++ +P+V++ N++I++L K V++A+ +F M ++ PTV+T
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNTL+ G G+++ A+ L MV K P+ ITFNTL D L K V A +L M+
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G P+V TYN+++ G +V + F+ M ++ V PD + ++ G K +++
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIE 694
Query: 181 EALNLL 186
+A ++
Sbjct: 695 DAYKII 700
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L+++ + P+VV Y +ID+LC + ++ A +F +M T R P +TY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TL+ F +++ +EM PDV+TF LVDAL K G EA + L VM
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+G PN+ TYN+L+ G V ++ ++F M + V P ++Y + I+ + K
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVIT 60
G +L +++ + N + +N +I L K V+DA +L+ ++++ R SPT T
Sbjct: 834 GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI G G++ A L M+ P+ +N L++ K G A + M+
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
KEG +P++ TY+ L+D C+V V++ F + + + PDV Y+++ING K ++
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 181 EALNLL 186
EAL L
Sbjct: 1014 EALVLF 1019
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 2 GHTRPALQLLRQI-QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G+ AL L + + P Y +ID L K + +A LF M+ P
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI GF G+ +AA L MV + + PD+ T++ LVD L GRV E + +
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTM-TQMEVTPDVWSYSIMINGFCKIKMV 179
+ G P+VV YN +++G + + +FN M T +TPD+++Y+ +I MV
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 180 DEA 182
+EA
Sbjct: 1049 EEA 1051
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A Q+ ++ P+ V YN ++ K +++A L SEM+ P VI
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI +++ A + M + P V+T+NTL+ L K G+++EA + M++
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PN +T+N+L D C EV + M M PDV++Y+ +I G K V E
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 182 AL 183
A+
Sbjct: 662 AM 663
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L +++ + +P++ Y+ ++D LC V++ + F E+ ++P V+ Y
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 62 NTLIFGFCIVGQMEAAVCLLNEM-VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
N +I G ++E A+ L NEM + I PD+ T+N+L+ L G V+EA + +
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
+ G +PNV T+N+L+ GY L + ++ TM +P+ +Y + N
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + AL+ +++ K PN+V N + SL K +A +F + + P +TY
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ + VG+++ A+ LL+EM+ PDVI N+L++ L K RV EA + M +
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
KP VVTYN+L+ G ++ + ++F M Q P+ +++ + + CK V
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 182 ALNLL 186
AL +L
Sbjct: 627 ALKML 631
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ LL++++ +PNV + I L + +N+AY + M + P V+TY LI
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C +++ A + +M PD +T+ TL+D S + K + M K+G P+
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD 362
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
VVT+ L+D C + D + M + P++ +Y+ +I G ++ +D+AL L
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A QL + +PN +YN +I+ K + A LF MV + + P + TY
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM-I 120
+ L+ C+VG+++ + E+ +NPDV+ +N +++ L K R++EA + M
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
G P++ TYNSL+ + V + I+N + + + P+V++++ +I G+
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A LR+++ N YN +I L K + +A ++ M+ + P++ TY
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++L+ G +++ + LL EM + P+V TF + L + G++ EA +L M
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
EG P+VVTY L+D C ++++ K++F M PD +Y +++ F + +D
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVI 59
+G L ++++ P+VV YN II+ L K + +A LF+EM T R I+P +
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TYN+LI I G +E A + NE+ + P+V TFN L+ S G+ + A V M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 120 IKEGEKPNVVTYNSL 134
+ G PN TY L
Sbjct: 1094 VTGGFSPNTGTYEQL 1108
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A L ++ + PN+ YNT+I L + ++DA LF M + + PT TY
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
I + G +A+ +M K I P+++ N + +L+K GR +EAK + +
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+ VTYN +M Y V E+++ + + M + PDV + +IN K VDE
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 182 A 182
A
Sbjct: 557 A 557
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+++ R++ + +P++ Y++++ L K + ++ L EM T + P V T+ I
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G++ A +L M + PDV+T+ L+DAL ++ AK V M KP
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ VTY +L+D + ++++ K ++ M + PDV +++I+++ CK EA + L
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
Q +++ P+VV + ++D+LCK +A++ M + I P + TYNTLI G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
V +++ A+ L M + P T+ +D K G A M +G PN+
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
V N+ + + K IF + + + PD +Y++M+ + K+ +DEA+ LL
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+L ++ +P Y ID K A F +M TK I+P ++ N ++
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+ A + + + PD +T+N ++ SK G + EA +L+ M++ G +P
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V+ NSL++ V++ +F M +M++ P V +Y+ ++ G K + EA+ L
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 187 K 187
+
Sbjct: 597 E 597
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
QP + YN +I L + ++ A ++F ++ + P V TYN L+ + G+++
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE-KPNVVTYNSLMDGY 138
L EM + IT N ++ L K G V +A ++ ++ + + P TY L+DG
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + K +F M P+ Y+I+INGF K D A L K
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 29 IIDSLCKDKLVNDAYNLFSEMVTKR--ISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
II CK V+ A LF E TK + P + TYN LI G +E A + ++
Sbjct: 755 IIRYSCKHNNVSGARTLF-EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
PDV T+N L+DA K G++ E + M + N +T+N ++ G V+
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 147 TKDI-FNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILY 192
D+ ++ M+ + +P +Y +I+G K + EA L + + Y
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
N ++++L D + + +F M + I TY T+ + G ++ A L +M
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ ++N L+ L K EA V MI EG +P++ TY+SLM G ++++
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ M + + P+V++++I I + ++EA +LK
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 283
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 39/222 (17%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAY---------------NLF 46
G + A+ Q++ K P+ V T++ + K L+ DAY NLF
Sbjct: 657 GQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 47 SEMVTKRISPTVITYNTLIF-------GFCIVGQ---------------MEAAVCLLNEM 84
E + I N + F G C G + A L +
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 85 VLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
+ P + T+N L+ L + ++ A++V + G P+V TYN L+D Y +
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+++ +++ M+ E + +++I+I+G K VD+AL+L
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+LL+ ++ PN V+YNT++ +LCK+ V A +L SEM P +T+N LI
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILIS 256
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+C ++ ++ LL + PDV+T +++ L EGRV EA VL + +G K
Sbjct: 257 AYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV 316
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL--- 183
+VV N+L+ GYC + ++ + F M + P+V +Y+++I G+C + M+D AL
Sbjct: 317 DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTF 376
Query: 184 NLLKHPILYW 193
N +K + W
Sbjct: 377 NDMKTDAIRW 386
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL++L +++ K + +VV NT++ C + A F EM K P V TY
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G+C VG +++A+ N+M +I + TFNTL+ LS GR + +L +M
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 122 EG--EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKM 178
+ YN ++ G+ KE N+ +D + +ME + P S + C+
Sbjct: 417 SDTVHGARIDPYNCVIYGF--YKE-NRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGG 473
Query: 179 VDE 181
+D+
Sbjct: 474 MDD 476
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P V + + SLC+ ++D + +M+ + P++I + LI + G++E ++ L
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+N+MV + P TFN ++ K+ +V + M + G P+ +YN L++ C+
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCV 575
Query: 141 VKEVNKTKDIFNTMTQMEVTPD--VWSYSIMINGFC 174
++ K +F+ M + + PD +WS S+M FC
Sbjct: 576 KGDIQKAWLLFSRMVEKSIVPDPSMWS-SLM---FC 607
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G R A + +++ K PNV YN +I C +++ A + F++M T I T
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 61 YNTLIFGFCIVGQMEAAVCLLN---------------------------------EMVLK 87
+NTLI G I G+ + + +L E +LK
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLK 450
Query: 88 --SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ P + + + +L ++G + + K MI EG P+++ + L+ Y ++
Sbjct: 451 MEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIE 510
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ ++ N M P +++ +I GFCK D+ +N +K
Sbjct: 511 ESLELINDMVTRGYLPRSSTFNAVIIGFCK---QDKVMNGIK 549
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
Q+ G+ P++++ + +I + + ++ L ++MVT+ P T+N +I GFC
Sbjct: 483 QMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
++ + + +M + PD ++N L++ L +G +++A + + M+++ P+ ++
Sbjct: 543 KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWS 602
Query: 133 SLMDGYCLVKE 143
SLM +CL ++
Sbjct: 603 SLM--FCLSQK 611
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 2 GHTRPALQLLRQIQGKSA--QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
G T L++L +Q + YN +I K+ DA +M +++ P +
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAV 459
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+ + C G M+ ++M+ + P +I + L+ S+ G+++E+ ++ M
Sbjct: 460 DRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+ G P T+N+++ G+C +V M + PD SY+ ++ C +
Sbjct: 520 VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 180 DEALNLLKHPILYWMLYAKAI 200
+A W+L+++ +
Sbjct: 580 QKA----------WLLFSRMV 590
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ ++ TII + +L+ ++ + I P++ +N+++ A
Sbjct: 110 PDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFF 169
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+M+ I+ DV T+ L+ LS R+ + +L +M G PN V YN+L+ C
Sbjct: 170 TRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK 229
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+V + + + + M + P+ +++I+I+ +C + + +++ LL+
Sbjct: 230 NGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLE 272
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 1/164 (0%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
Y + LC + + Y L EM + P + T+I GF ++ + +++ +
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
I P + FN+++D L KE + M+ G +V TY LM G L +
Sbjct: 139 SKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ M V P+ Y+ +++ CK V A +L+
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSE 242
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G +L+L+ + + P +N +I CK V + +M + P +Y
Sbjct: 507 GKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESY 566
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKE 106
N L+ C+ G ++ A L + MV KSI PD +++L+ LS++
Sbjct: 567 NPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 102/184 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A+++L +I K + +MYNT+ +L K K ++ ++LF +M SP + TY
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI F VG+++ A+ + E+ PD+I++N+L++ L K G V EA M +
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+VVTY++LM+ + + V +F M P++ +Y+I+++ K E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 182 ALNL 185
A++L
Sbjct: 601 AVDL 604
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 82/134 (61%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+ + +++ +P+++ YN++I+ L K+ V++A+ F EM K ++P V+T
Sbjct: 490 VGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVT 549
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+TL+ F ++E A L EM++K P+++T+N L+D L K GR EA ++ + M
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Query: 121 KEGEKPNVVTYNSL 134
++G P+ +TY L
Sbjct: 610 QQGLTPDSITYTVL 623
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 87/158 (55%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+Y+ ++ +L K V++A+ LF +M + + +Y +++ C G+ A+ +L+++
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
K + D + +NT+ AL K ++ ++ M K+G P++ TYN L+ + V EV
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
++ +IF + + + PD+ SY+ +IN K VDEA
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+GH A +L + + Y ++++SLC +A + S++ K + +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT+ + Q+ L +M +PD+ T+N L+ + + G V EA N+ +
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 121 KEGEKPNVVTYNSLMDGYCLVK--EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
+ KP++++YNSL++ CL K +V++ F M + + PDV +YS ++ F K +
Sbjct: 505 RSDCKPDIISYNSLIN--CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 179 VDEALNLLKH 188
V+ A +L +
Sbjct: 563 VEMAYSLFEE 572
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 32/220 (14%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+ L ++ + NVV YNT++ L K K+V+ A +FS MV P T
Sbjct: 283 IGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYT 342
Query: 61 YNTL---------------------------IFGFCI-----VGQMEAAVCLLNEMVLKS 88
Y+ L I+ + + +G + A L +M
Sbjct: 343 YSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFP 402
Query: 89 INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTK 148
+ + ++ +++++L G+ EA +L+ + ++G + + YN++ +K+++
Sbjct: 403 VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH 462
Query: 149 DIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
D+F M + +PD+++Y+I+I F ++ VDEA+N+ +
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + +I+ + ++ YN ++D+L KD+ A +F +M + TY +I
Sbjct: 222 AFDVYCEIRRGGHKLDIFAYNMLLDALAKDE---KACQVFEDMKKRHCRRDEYTYTIMIR 278
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+G+ + AV L NEM+ + + +V+ +NTL+ L+K V +A V + M++ G +P
Sbjct: 279 TMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRP 338
Query: 127 NVVTYNSLMDGYCLVKEVNKTK-DIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
N TY+ L++ LV E + D +++ +T ++SY ++ K+ V EA L
Sbjct: 339 NEYTYSLLLN--LLVAEGQLVRLDGVVEISKRYMTQGIYSY--LVRTLSKLGHVSEAHRL 394
Query: 186 L 186
Sbjct: 395 F 395
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 19 AQPNVVMYNTIIDSLCKDKL---VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME 75
+Q + +YN II L + L + ++ MV + + T N LI F ++
Sbjct: 129 SQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQ 188
Query: 76 AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
+ L+ + LK + T+ L+ A + +A +V + + G K ++ YN L+
Sbjct: 189 MCLRLVKKWDLKM---NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLL 245
Query: 136 DGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
D L K+ K +F M + D ++Y+IMI +I DEA+ L I
Sbjct: 246 DA--LAKD-EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI 297
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 106/187 (56%), Gaps = 7/187 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+ ++ + + + V YN D+L K V +A+ L EM + I P VI Y TLI
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C+ G++ A+ L++EM+ ++PD+IT+N LV L++ G +E + M EG KP
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKP 491
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL- 185
N VT + +++G C ++V + +D F+++ Q P+ + + + G+C+ + +A
Sbjct: 492 NAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPE--NKASFVKGYCEAGLSKKAYKAF 547
Query: 186 --LKHPI 190
L++P+
Sbjct: 548 VRLEYPL 554
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL L ++ GK + N V+ + I+ CK + +A F E I + YN
Sbjct: 337 ALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFD 396
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+G++E A LL EM + I PDVI + TL+D +G+V +A +++ MI G P
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSP 456
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+++TYN L+ G + +I+ M P+ + S++I G C + V EA
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A +L+++ +P M +I + CK V +A LF MV + + P + TY
Sbjct: 570 GYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD-----------ALSKEGRV- 109
+I +C + +++ A L +M + I PDV+T+ L+D S +G V
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG 689
Query: 110 -KEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSI 168
++A VL G +VV Y L+D C + + + ++F+ M + PD+ +Y+
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 169 MINGFCKIKMVDEALNLL 186
+I+ + + +D A+ L+
Sbjct: 750 LISSYFRKGYIDMAVTLV 767
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 28/203 (13%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM------------ 49
GH L++ +++ + +PN V + II+ LC + V +A + FS +
Sbjct: 472 GHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFV 531
Query: 50 -------VTKRISPTVI---------TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDV 93
++K+ + Y L F CI G +E A +L +M + P
Sbjct: 532 KGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGR 591
Query: 94 ITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT 153
++ A K V+EA+ + M++ G P++ TY ++ YC + E+ K + +F
Sbjct: 592 SMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFED 651
Query: 154 MTQMEVTPDVWSYSIMINGFCKI 176
M Q + PDV +Y+++++ + K+
Sbjct: 652 MKQRGIKPDVVTYTVLLDRYLKL 674
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +LL++++ + P+V+ Y T+ID C V DA +L EM+ +SP +IT
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN L+ G G E + + M + P+ +T + +++ L +VKEA++ + +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL- 519
Query: 121 KEGEKPNVVTYNSLMDGYC------------------LVKEV--------------NKTK 148
E+ S + GYC L K V K
Sbjct: 520 ---EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAH 576
Query: 149 DIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
D+ M+ V P MI FCK+ V EA
Sbjct: 577 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA 610
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%)
Query: 28 TIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLK 87
+ID CK+ + +A +M+ K + + + ++ +C + A+ E
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM 382
Query: 88 SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
+I D + +N DALSK GRV+EA +L M G P+V+ Y +L+DGYCL +V
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 148 KDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
D+ + M ++PD+ +Y+++++G + +E L + +
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYER 483
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+Y + SLC + + A+++ +M R+ P +I FC + + A L + M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY------ 138
V + + PD+ T+ ++ + +++A+++ M + G KP+VVTY L+D Y
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 139 ----CLVK-EVNKTK--DIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
C V+ EV K K ++ + + DV Y+++I+ CK+ +++A L I
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMI 736
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+ + R A L + + P++ Y +I + C+ + A +LF +M + I P V+T
Sbjct: 604 LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT 663
Query: 61 YNTLIFGFCIVGQMEAAVC-------------LLNEMVLKSINPDVITFNTLVDALSKEG 107
Y L+ + + C +L E I DV+ + L+D K
Sbjct: 664 YTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMN 723
Query: 108 RVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+++A + MI G +P++V Y +L+ Y
Sbjct: 724 NLEQAAELFDRMIDSGLEPDMVAYTTLISSY 754
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 3/170 (1%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI---SPTVITYNTLIFGFCIVGQMEAAV 78
+V Y T I+ LC A L E++ ++ ++ GFC +M+AA
Sbjct: 244 SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAE 303
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
++ EM DV ++D K + EA L M+ +G K N V + ++ Y
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCY 363
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
C + + + F M + D Y++ + K+ V+EA LL+
Sbjct: 364 CKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R A ++LR+ +VV Y +ID CK + A LF M+ + P ++ Y TL
Sbjct: 691 RKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTL 750
Query: 65 IFGFCIVGQMEAAVCLLNEMVLK 87
I + G ++ AV L+ E+ K
Sbjct: 751 ISSYFRKGYIDMAVTLVTELSKK 773
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 103/182 (56%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL Q+ + +P++V Y +I L ++DA N+ +++ + +SP YN L+
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G+ A L +EM+ ++I PD + TL+D + G EA+ V ++ +++G K
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV +N+++ G+C +++ N M + + PD ++YS +I+G+ K + + A+ +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 187 KH 188
++
Sbjct: 579 RY 580
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L + K PN + Y +I + CK K + A L +M + P ++TY
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI G + G M+ AV + +++ + ++PD +N L+ L K GR AK + + M+
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+ Y +L+DG+ + ++ + +F+ + V DV ++ MI GFC+ M+DE
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Query: 182 AL 183
AL
Sbjct: 539 AL 540
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G PA L ++ ++ P+ +Y T+ID + ++A +FS V K + V+ +
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I GFC G ++ A+ +N M + + PD T++T++D K+ + A + M K
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
KPNVVTY SL++G+C + ++ F M ++ P+V +Y+ +I K
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK------ 637
Query: 182 ALNLLKHPILYWML 195
+ L+ + YW L
Sbjct: 638 ESSTLEKAVYYWEL 651
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G +L+ GK PN+V YNTII CK + +AY +F E+ K PT+ T+
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 62 NTLIFGFCIVGQMEAAVCLLNE-----------------------------------MVL 86
T+I GFC G A+ LL+E ++
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
PDV T+N L++ L KEG+ + A L K+G PN ++Y L+ YC KE +
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ M + PD+ +Y I+I+G +D+A+N+
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH A+ + ++ + P+ +YN ++ LCK A LFSEM+ + I P Y
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TLI GF G + A + + V K + DV+ N ++ + G + EA + M +
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC---KIKM 178
E P+ TY++++DGY +++ IF M + + P+V +Y+ +INGFC KM
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKM 608
Query: 179 VDEAL 183
+E
Sbjct: 609 AEETF 613
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+V YN +I+ LCK+ A E K + P ++Y LI +C + + A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
LL +M + PD++T+ L+ L G + +A N+ +I G P+ YN LM G C
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
K +F+ M + PD + Y+ +I+GF + DEA
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL +++ + + +V N IID+ + D ++ P V TYN LI
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRL 355
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C G+ E AV L+E K + P+ +++ L+ A K A +L M + G KP++
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
VTY L+ G + ++ ++ + V+PD Y+++++G CK
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 50/223 (22%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL + ++ + P+ Y+TIID K + + A +F M + P V+TY
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR-VKEAKNVLAVMI 120
+LI GFC G + A EM L+ + P+V+T+ TL+ +L+KE +++A +M+
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMM 653
Query: 121 KEGEKPNVVTYNSLMDGY------------------------------------------ 138
PN VT+N L+ G+
Sbjct: 654 TNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAY 713
Query: 139 -----CL-VKEVNKTKDIF-NTMTQMEVTPDVWSYSIMINGFC 174
CL V + KT +F + M + +PD S++ +++GFC
Sbjct: 714 NSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 37/202 (18%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS------------------------- 55
P+V+ N+++ L K + + DA ++ EM + S
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 56 ----------PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSK 105
P ++ YNT+I G+C +G +E A + E+ LK P + TF T+++ K
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 106 EGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG-YCLVKEVNKTKDIFNTMTQMEVTPDVW 164
EG + +L+ + + G + +V N+++D Y +V+ + I + + PDV
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVA 346
Query: 165 SYSIMINGFCKIKMVDEALNLL 186
+Y+I+IN CK + A+ L
Sbjct: 347 TYNILINRLCKEGKKEVAVGFL 368
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDK-LVNDAYNLFSEMVTKRISPTVIT 60
G + A + +++Q + PNVV Y T+I SL K+ + A + M+T + P +T
Sbjct: 604 GDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
Query: 61 YNTLIFGFCIV--------------GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKE 106
+N L+ GF GQ + M + +N+ + L
Sbjct: 664 FNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVH 723
Query: 107 GRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
G VK A M+K+G P+ V++ +++ G+C+V
Sbjct: 724 GMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV 758
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 23/203 (11%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L+Q+ K P++ YN ++D LCK +++DA + M + P +TY L+
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C VG+++AA LL EM+ + P+ T N L+ +L K GR+ EA+ +L M ++G
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIF-----------------------NTMTQMEVTPDV 163
+ VT N ++DG C E++K +I +++ + PD+
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 164 WSYSIMINGFCKIKMVDEALNLL 186
+YS ++NG CK EA NL
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLF 547
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 107/195 (54%), Gaps = 9/195 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+++ Y+T+++ LCK +A NLF+EM+ +++ P + YN I FC G++ +A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M K + + T+N+L+ L + ++ E ++ M ++G PN+ TYN+ + C
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI--------LY 192
++V ++ + M Q + P+V+S+ +I FCK+ D A + + + LY
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 193 WMLYAKAIMLTGQFL 207
+++ + ++ GQ L
Sbjct: 702 SLMFNE-LLAAGQLL 715
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 39/225 (17%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI----SPT 57
G + +++ +++ + P++V +N+ I +LCK+ V DA +FS+M P
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPN 290
Query: 58 VITYNTLIFGFCIVGQMEAAVCL-----------------------------------LN 82
ITYN ++ GFC VG +E A L L
Sbjct: 291 SITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLK 350
Query: 83 EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK 142
+M K I P + ++N L+D L K G + +AK ++ +M + G P+ VTY L+ GYC V
Sbjct: 351 QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 143 EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+V+ K + M + P+ ++ +I+++ K+ + EA LL+
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P +N +I +LC V+ A LF EM K P T+ L+ G+C G + + L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
LN M + P+ + +NT+V + +EGR +++ ++ M +EG P++VT+NS + C
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 141 VKEVNKTKDIFNTMTQMEV----TPDVWSYSIMINGFCKIKMVDEALNLLK 187
+V IF+ M E P+ +Y++M+ GFCK+ ++++A L +
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDS----------------------------- 32
G T L+LL ++ PN V+YNTI+ S
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255
Query: 33 ------LCKDKLVNDAYNLFSEMVTKRI----SPTVITYNTLIFGFCIVGQMEAAVCLLN 82
LCK+ V DA +FS+M P ITYN ++ GFC VG +E A L
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Query: 83 EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK 142
+ + ++N + L + G+ EA+ VL M +G P++ +YN LMDG C +
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 143 EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
++ K I M + V PD +Y +++G+C + VD A +LL+
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L ++ K +PN + ++ CK L + L + M + + P + YNT++
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG--- 123
FC G+ + + ++ +M + + PD++TFN+ + AL KEG+V +A + + M +
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 124 -EKPNVVTYNSLMDGYCLVKEVNKTKDIFNT----------------------------- 153
+PN +TYN ++ G+C V + K +F +
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 154 ------MTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
MT + P ++SY+I+++G CK+ M+ +A
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L ++ G+ QP+ V YN I CK ++ A+ + +M K ++ TY
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI G I Q+ L++EM K I+P++ T+NT + L + +V++A N+L M++
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ PNV ++ L++ +C V + + +++F T + YS+M N + +
Sbjct: 658 KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLK 716
Query: 182 ALNLLK 187
A LL+
Sbjct: 717 ATELLE 722
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM----------- 49
MG A +LLR++ K + V N I+D LC ++ A + M
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 50 ------------VTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFN 97
+ P +ITY+TL+ G C G+ A L EM+ + + PD + +N
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 98 TLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM 157
+ K+G++ A VL M K+G ++ TYNSL+ G + ++ + + + M +
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 158 EVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++P++ +Y+ I C+ + V++A NLL
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLL 652
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 6 PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLI 65
P QL+R + +P+V +YN +++S K++ V L+ +MV I+P T+N LI
Sbjct: 96 PQFQLVRS-RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLI 154
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
C ++AA L +EM K P+ TF LV K G + +L M G
Sbjct: 155 RALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL 214
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
PN V YN+++ +C + ++ + M + + PD+ +++ I+ CK
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 28 TIIDSLCKDKLVNDAYNLFSEMVTKRI---SPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+++ K ++ A+ F ++V R P+V YN L+ ++E L +M
Sbjct: 80 SVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
VL I P TFN L+ AL V A+ + M ++G KPN T+ L+ GYC
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+K ++ N M V P+ Y+ +++ FC+ D++
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDS 236
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 91 PDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDI 150
P V +N L+++ KE RV+ + M+ G P T+N L+ C V+ +++
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 151 FNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
F+ M + P+ +++ I++ G+CK + D+ L LL
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELL 205
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ +++ I + N V YNT++ SLC + ++ + + M PTVITY
Sbjct: 293 GNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITY 352
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G C + A+ +M+ + PD++T+NT++ A+SKEG V +A +L ++
Sbjct: 353 NILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P ++TYNS++DG + K ++++ M + PD + +I GFC+ +V+E
Sbjct: 413 TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEE 472
Query: 182 ALNLLK 187
A +LK
Sbjct: 473 AGQVLK 478
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 5/199 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH R AL LL + + P+V+ YNT+I + A + + + P +ITY
Sbjct: 188 GHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY 247
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ C A+ +L +M ++ PD++T+N+LV+ + G ++E +V+ ++
Sbjct: 248 TVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILS 307
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G + N VTYN+L+ C + ++ ++I N M Q P V +Y+I+ING CK +++
Sbjct: 308 HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSR 367
Query: 182 ALNLLKHPILYWMLYAKAI 200
A++ Y ML K +
Sbjct: 368 AIDF-----FYQMLEQKCL 381
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ Q+ + P++V YNT++ ++ K+ +V+DA L + P +ITYN++I
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G G M+ A+ L ++M+ I PD IT +L+ + V+EA VL G
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 487
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
TY ++ G C KE+ ++ M PD Y+ ++ G ++ M EA+
Sbjct: 488 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+ + + P+ + ++ L + ++ A + MV P ITY
Sbjct: 118 GKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITY 177
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I C G + A+ LL +M L PDVIT+NT++ + G ++A ++
Sbjct: 178 NMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQ 237
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P ++TY L++ C + ++ M PD+ +Y+ ++N C+ ++E
Sbjct: 238 NGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEE 297
Query: 182 ALNLLKH 188
++++H
Sbjct: 298 VASVIQH 304
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++LL ++ P ++ YN++ID L K L+ A L+ +M+ I P IT
Sbjct: 398 GMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI+GFC +E A +L E + T+ ++ L K+ ++ A V+ +M+
Sbjct: 458 RSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT 517
Query: 122 EGEKPNVVTYNSLMDG 137
G KP+ Y +++ G
Sbjct: 518 GGCKPDETIYTAIVKG 533
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
N I+ +LC + + DA L M P + + L+ G + Q++ A+C+L MV+
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
PD IT+N ++ L K+G ++ A +L M G P+V+TYN+++ C+ N
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVI--RCMFDYGNA 225
Query: 147 TKDI--FNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ I + Q P + +Y++++ C+ A+ +L+
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLE 268
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 94/165 (56%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+V+ Y II+ LCK+ + A NL S ++ ++ ITYN+LI G C G + A+ L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+ + + P +T+ L+D L KEG +A+ +L M+ +G PN++ YNS++DGYC +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + + VTPD ++ S MI G+CK ++EAL++
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVF 818
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ AL LL ++ + +PN++ Y II LCK + +A+ LF+ +++ I Y
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TLI G C G + A +L +M + I P ++T+NT+++ L GRV EA V
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----S 405
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDI------------------------------- 150
+G +V+TY++L+D Y V+ ++ +I
Sbjct: 406 KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGE 465
Query: 151 ----FNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ M +M++TPD +Y+ MI G+CK ++EAL +
Sbjct: 466 ADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 97/166 (58%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN+V Y T++ +LC+ V++ +L + + + Y+ I G+ G + A+
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
EMV K +N DV++++ L+D LSKEG V+EA +L MIKEG +PN++TY +++ G C
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ + +FN + + + D + Y +I+G C+ ++ A ++L
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL R++ K +VV Y+ +ID L K+ V +A L +M+ + + P +ITY
Sbjct: 256 GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITY 315
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I G C +G++E A L N ++ I D + TL+D + ++G + A ++L M +
Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P+++TYN++++G C+ V++ ++ V DV +YS +++ + K++ +D
Sbjct: 376 RGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDA 430
Query: 182 ALNLLKH 188
L + +
Sbjct: 431 VLEIRRR 437
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 93/187 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL L + + N + YN++I+ LC+ + +A LF + + P+ +TY
Sbjct: 669 GFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTY 728
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI C G A LL+ MV K + P++I +N++VD K G+ ++A V++ +
Sbjct: 729 GILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMM 788
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+ T +S++ GYC ++ + +F ++ D + + +I GFC ++E
Sbjct: 789 GRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEE 848
Query: 182 ALNLLKH 188
A LL+
Sbjct: 849 ARGLLRE 855
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 41/221 (18%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG A L +I + + +Y T+ID +C+ +N A+++ +M + I P+++T
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA----------LSKEGRVK 110
YNT+I G C+ G++ A + V K + DVIT++TL+D+ L R
Sbjct: 385 YNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 111 EAK--------NVLA----VMIKEGEK-------------PNVVTYNSLMDGYCLVKEVN 145
EAK N+L +M GE P+ TY +++ GYC ++
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIE 499
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++FN + + V+ V Y+ +I+ CK M+D A +L
Sbjct: 500 EALEMFNELRKSSVSAAVC-YNRIIDALCKKGMLDTATEVL 539
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 79/148 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+L ++ P+ V Y +ID+LCK+ L DA L MV+K + P +I YN+++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C +GQ E A+ +++ ++ + PD T ++++ K+G ++EA +V +
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISA 828
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTM 154
+ + L+ G+C + + + + M
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 70/254 (27%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL++ +++ KS+ V YN IID+LCK +++ A + E+ K + + T
Sbjct: 496 GQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTS 554
Query: 62 NT----------------LIFG-------------------FCIVGQMEAAV-------- 78
T L++G C G EAA+
Sbjct: 555 RTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRR 614
Query: 79 ---------CLLNEMV--LKSINP---------------DVITFNTLVDALSKEGRVKEA 112
+L +V L+S++ DVI + +++ L KEG + +A
Sbjct: 615 KGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKA 674
Query: 113 KNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
N+ + G N +TYNSL++G C + + +F+++ + + P +Y I+I+
Sbjct: 675 LNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDN 734
Query: 173 FCKIKMVDEALNLL 186
CK + +A LL
Sbjct: 735 LCKEGLFLDAEKLL 748
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 46/177 (25%)
Query: 56 PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSIN------------------------- 90
P+ +T+ +LI+ F G+M+ A+ +L M K++N
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 91 -------------PDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
P+++T+ TLV AL + G+V E ++++ + EG + + V Y++ + G
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 138 Y----CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
Y LV + + ++ M + + DV SYSI+I+G K V+EAL LL I
Sbjct: 252 YFKGGALVDALMQDRE----MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 1 MGHTRPALQLL-RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G T A++++ R++ G+ P+ +++I CK + +A ++F+E K IS
Sbjct: 773 LGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF 831
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+ LI GFC G+ME A LL EM+ ++ V+ VDA E + + L +
Sbjct: 832 GFLFLIKGFCTKGRMEEARGLLREML---VSESVVKLINRVDAELAES--ESIRGFLVEL 886
Query: 120 IKEGEKPNVV 129
++G P +
Sbjct: 887 CEQGRVPQAI 896
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 1/182 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMV-TKRISPTVITYNTLI 65
AL+L ++ K +P V + T+I LCKD V +A + +M+ + PTV Y +LI
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
C +G++ A L +E I D ++TL+ +L K GR E +L M ++G K
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
P+ VTYN L++G+C+ + + + M + + PDV SY++++ F +IK +EA L
Sbjct: 291 PDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYL 350
Query: 186 LK 187
+
Sbjct: 351 FE 352
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + +L ++ K +P+ V YN +I+ C + A + EMV K + P VI+Y
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ F + + E A L +M + +PD +++ + D L + + +EA +L M+
Sbjct: 332 NMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLF 391
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ-MEVTPDVWSYSIMINGFCKIKMVD 180
+G KP + C ++ + +++ + + DVW S+MI CK ++
Sbjct: 392 KGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVW--SVMIPTMCKEPVIS 449
Query: 181 EALNLL 186
++++LL
Sbjct: 450 DSIDLL 455
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 36/155 (23%)
Query: 56 PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNV 115
P TYN LI G G + A+ L +EMV K + P +TF TL+ L K+ RVKEA +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 116 LAVMIK-EGEKPNVVTYNSLMDGYCLVKEVN---KTKD---------------------- 149
M+K G +P V Y SL+ C + E++ K KD
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 150 ----------IFNTMTQMEVTPDVWSYSIMINGFC 174
I M++ PD +Y+++INGFC
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFC 304
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 100/182 (54%), Gaps = 1/182 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L + + +P+V Y+T+I+ L K ++DA LF EM + ++P V YN LI
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 67 GFCIVGQMEAAVCLLNEMVL-KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
GF + A+ L + ++ S+ P+V T N ++ LSK GRV + + M + +
Sbjct: 228 GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE 287
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++ TY+SL+ G C V+K + +FN + + + + DV +Y+ M+ GFC+ + E+L L
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347
Query: 186 LK 187
+
Sbjct: 348 WR 349
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 97/185 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ AL ++++++ +V Y +IID LCK K + +A NL EM +
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G ++ A L EM P V+++N L+ L K G+ EA + M++
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G KP++ TY+ L+ G C ++++ ++++ Q + DV ++I+I+G C + +D+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 182 ALNLL 186
A+ ++
Sbjct: 588 AMTVM 592
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
LR++ +P VV YN +I LCK +A EM+ P + TY+ L+ G C
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+++ A+ L ++ + + DV+ N L+ L G++ +A V+A M N+V
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV-------DEA 182
TYN+LM+G+ V + N+ I+ M +M + PD+ SY+ ++ G C + V D+A
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDA 665
Query: 183 LNLLKHPILY-WMLYAKAIM 201
N P +Y W + +A++
Sbjct: 666 RNHGIFPTVYTWNILVRAVV 685
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L++ +++ + ++ Y+++I LC V+ A ++F+E+ ++ S V+TY
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
NT++ GFC G+++ ++ L M K S+N ++++N L+ L + G++ EA + +M
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKNSVN--IVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G + TY + G C+ VNK + + DV++Y+ +I+ CK K ++
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 181 EALNLLK 187
EA NL+K
Sbjct: 447 EASNLVK 453
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ +R+I G +P + YNT++++ + K +LF+ T ++P + TYN LI
Sbjct: 101 FKRMREIFG--CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKM 158
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C + E A L+ M + PDV +++T+++ L+K G++ +A + M + G P+
Sbjct: 159 SCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD 218
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQ-MEVTPDVWSYSIMINGFCKIKMVDEALNL 185
V YN L+DG+ K+ ++++ + + V P+V +++IMI+G K VD+ L +
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
Query: 5 RPALQLL-RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
+ A++L R ++ S PNV +N +I L K V+D ++ M + TY++
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
LI G C G ++ A + NE+ + + DV+T+NT++ + G++KE+ + +M +
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHK 354
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
N+V+YN L+ G ++++ I+ M D +Y I I+G C V++AL
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 184 NLLK 187
+++
Sbjct: 415 GVMQ 418
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVT-KRISPTVIT 60
G AL+L ++ + P+V YN +ID K+K A L+ ++ + P V T
Sbjct: 198 GKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT 257
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N +I G G+++ + + M D+ T+++L+ L G V +A++V +
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ +VVTYN+++ G+C ++ ++ +++ M + + + ++ SY+I+I G + +D
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKID 376
Query: 181 EA 182
EA
Sbjct: 377 EA 378
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + +L+L R ++ K++ N+V YN +I L ++ +++A ++ M K + TY
Sbjct: 339 GKIKESLELWRIMEHKNS-VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
I G C+ G + A+ ++ E+ + DV + +++D L K+ R++EA N++ M K
Sbjct: 398 GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK 457
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G + N N+L+ G + + M + P V SY+I+I G CK E
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGE 517
Query: 182 ALNLLK 187
A +K
Sbjct: 518 ASAFVK 523
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+L Q + +V+M+N +I LC ++DA + + M + + ++TYNTL+
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF VG A + M + PD+I++NT++ L V A G P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 127 NVVTYNSLM 135
V T+N L+
Sbjct: 673 TVYTWNILV 681
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+ ++ ++ ++ N+V YNT+++ K N A ++ M + P +I+
Sbjct: 582 VGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIIS 641
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDAL 103
YNT++ G C+ + A+ ++ I P V T+N LV A+
Sbjct: 642 YNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL L Q++ P++V Y+ +I LCK + A L+ EM KRI P T+
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G C G + A LL+ ++ D++ +N ++D +K G ++EA + V+I+
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC---KIKM 178
G P+V T+NSL+ GYC + + + + I + + + P V SY+ +++ + K
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 179 VDE 181
+DE
Sbjct: 557 IDE 559
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPN-VVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G+ L LL+ + + + N ++ + ++ LCK +++A +LF++M +SP ++
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
Y+ +I G C +G+ + A+ L +EM K I P+ T L+ L ++G + EA+++L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
I GE ++V YN ++DGY + + ++F + + +TP V +++ +I G+CK + +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 180 DEALNLLKHPILY 192
EA +L LY
Sbjct: 520 AEARKILDVIKLY 532
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ LR + K P+VV +N+I+ CK V+ A + F ++ + P+V ++N LI
Sbjct: 206 AVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILIN 265
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C+VG + A+ L ++M + PD +T+N L G + A V+ M+ +G P
Sbjct: 266 GLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP 325
Query: 127 NVVTYNSLMDGYC----------LVKE--------------------------VNKTKDI 150
+V+TY L+ G C L+K+ +++ +
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 151 FNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
FN M ++PD+ +YSI+I+G CK+ D AL L
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 91/162 (56%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y+T++D LC+ + + DA K I P+V+++N+++ G+C +G ++ A ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ P V + N L++ L G + EA + + M K G +P+ VTYN L G+ L+ ++
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ M ++PDV +Y+I++ G C++ +D L LLK
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A LL + ++V+YN +ID K + +A LF ++ I+P+V T+N+LI+
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C + A +L+ + L + P V+++ TL+DA + G K + M EG P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 127 NVVTYNSLMDGYC----------LVKE--VNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
VTY+ + G C +++E K K M + PD +Y+ +I C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 175 KIKMVDEALNLLK 187
++K + A L+
Sbjct: 632 RVKHLSGAFVFLE 644
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G AL+L + +P+ V YN + +++ A+ + +M+ K +SP VIT
Sbjct: 270 VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPD-VITFNTLVDALSKEGRVKEAKNVLAVM 119
Y L+ G C +G ++ + LL +M+ + + +I + ++ L K GR+ EA ++ M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+G P++V Y+ ++ G C + + + +++ M + P+ ++ ++ G C+ M+
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 180 DEALNLL 186
EA +LL
Sbjct: 450 LEARSLL 456
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 97/181 (53%), Gaps = 7/181 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+L +L++++ ++ + YN+++ + + ++++ E+ K TY+T++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDKNEH----TYSTVVD 195
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C ++E AV L K I P V++FN+++ K G V AK+ ++K G P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V ++N L++G CLV + + ++ + M + V PD +Y+I+ GF + M+ A ++
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 187 K 187
+
Sbjct: 316 R 316
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 37 KLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSI-NPDVIT 95
++V+D+ + +M + ++ + +YN++++ F +M V K I + + T
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD--------VYKEIKDKNEHT 189
Query: 96 FNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMT 155
++T+VD L ++ ++++A L + P+VV++NS+M GYC + V+ K F T+
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 156 QMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ + P V+S++I+ING C + + EAL L
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK------------DKLVNDAYNLFSEM 49
G+T+ +L R+++ + P V Y+ I LC+ +++ +M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 50 VTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRV 109
++ I P ITYNT+I C V + A L M ++++ T+N L+D+L G +
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 110 KEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
++A + + + ++ + Y +L+ +C+ + +F+ + + YS +
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 170 INGFCKIKMVD 180
IN C+ +++
Sbjct: 732 INRLCRRHLMN 742
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L + + P+V +N++I CK + + +A + + ++P+V++Y
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALS------------KEGRV 109
TL+ + G ++ L EM + I P +T++ + L +E
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 110 KEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
++ K L M EG P+ +TYN+++ C VK ++ M + +Y+I+
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 170 INGFCKIKMVDEA 182
I+ C + +A
Sbjct: 662 IDSLCVYGYIRKA 674
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL L Q++ P++V Y+ +I LCK + A L+ EM KRI P T+
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G C G + A LL+ ++ D++ +N ++D +K G ++EA + V+I+
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC---KIKM 178
G P+V T+NSL+ GYC + + + + I + + + P V SY+ +++ + K
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 179 VDE 181
+DE
Sbjct: 557 IDE 559
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPN-VVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G+ L LL+ + + + N ++ + ++ LCK +++A +LF++M +SP ++
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
Y+ +I G C +G+ + A+ L +EM K I P+ T L+ L ++G + EA+++L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
I GE ++V YN ++DGY + + ++F + + +TP V +++ +I G+CK + +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 180 DEALNLLKHPILYWM 194
EA +L LY +
Sbjct: 520 AEARKILDVIKLYGL 534
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ LR + K P+VV +N+I+ CK V+ A + F ++ + P+V ++N LI
Sbjct: 206 AVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILIN 265
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C+VG + A+ L ++M + PD +T+N L G + A V+ M+ +G P
Sbjct: 266 GLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP 325
Query: 127 NVVTYNSLMDGYC----------LVKE--------------------------VNKTKDI 150
+V+TY L+ G C L+K+ +++ +
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 151 FNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
FN M ++PD+ +YSI+I+G CK+ D AL L
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 92/166 (55%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N Y+T++D LC+ + + DA K I P+V+++N+++ G+C +G ++ A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
++ + P V + N L++ L G + EA + + M K G +P+ VTYN L G+ L+
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ ++ M ++PDV +Y+I++ G C++ +D L LLK
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A LL + ++V+YN +ID K + +A LF ++ I+P+V T+N+LI+
Sbjct: 452 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C + A +L+ + L + P V+++ TL+DA + G K + M EG P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 127 NVVTYNSLMDGYC----------LVKE--VNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
VTY+ + G C +++E K K M + PD +Y+ +I C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 175 KIKMVDEALNLLK 187
++K + A L+
Sbjct: 632 RVKHLSGAFVFLE 644
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G AL+L + +P+ V YN + +++ A+ + +M+ K +SP VIT
Sbjct: 270 VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPD-VITFNTLVDALSKEGRVKEAKNVLAVM 119
Y L+ G C +G ++ + LL +M+ + + +I + ++ L K GR+ EA ++ M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+G P++V Y+ ++ G C + + + +++ M + P+ ++ ++ G C+ M+
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 180 DEALNLL 186
EA +LL
Sbjct: 450 LEARSLL 456
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 97/181 (53%), Gaps = 7/181 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+L +L++++ ++ + YN+++ + + ++++ E+ K TY+T++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDKNEH----TYSTVVD 195
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C ++E AV L K I P V++FN+++ K G V AK+ ++K G P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V ++N L++G CLV + + ++ + M + V PD +Y+I+ GF + M+ A ++
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 187 K 187
+
Sbjct: 316 R 316
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 37 KLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSI-NPDVIT 95
++V+D+ + +M + ++ + +YN++++ F +M V K I + + T
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD--------VYKEIKDKNEHT 189
Query: 96 FNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMT 155
++T+VD L ++ ++++A L + P+VV++NS+M GYC + V+ K F T+
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 156 QMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ + P V+S++I+ING C + + EAL L
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK------------DKLVNDAYNLFSEM 49
G+T+ +L R+++ + P V Y+ I LC+ +++ +M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 50 VTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRV 109
++ I P ITYNT+I C V + A L M ++++ T+N L+D+L G +
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 110 KEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
++A + + + ++ + Y +L+ +C+ + +F+ + + YS +
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 170 INGFCKIKMVD 180
IN C+ +++
Sbjct: 732 INRLCRRHLMN 742
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L + + P+V +N++I CK + + +A + + ++P+V++Y
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALS------------KEGRV 109
TL+ + G ++ L EM + I P +T++ + L +E
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 110 KEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
++ K L M EG P+ +TYN+++ C VK ++ M + +Y+I+
Sbjct: 602 EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNIL 661
Query: 170 INGFCKIKMVDEA 182
I+ C + +A
Sbjct: 662 IDSLCVYGYIRKA 674
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A++L +++ QP +Y T++ K V A +LF EM SPTV T
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI G G+++ A +M+ + PDV+ N L++ L K GRV+E NV + M
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 121 KEGEKPNVVTYNSLMDGYCLVK-EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
P VV+YN+++ K V++ F+ M V+P ++YSI+I+G+CK V
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 180 DEALNLLKH 188
++AL LL+
Sbjct: 426 EKALLLLEE 434
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Query: 21 PNVVMYNTIIDSLCKDKL-VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
P VV YNT+I +L + K V++ + F +M +SP+ TY+ LI G+C ++E A+
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE--GEKPNVVTYNSLMDG 137
LL EM K P + +L++AL K R EA N L +KE G + V Y ++
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRY-EAANELFKELKENFGNVSSRV-YAVMIKH 488
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ ++++ D+FN M PDV++Y+ +++G K M++EA +LL+
Sbjct: 489 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLR 538
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL LL ++ K P Y ++I++L K K A LF E+ + + Y +I
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
F G++ AV L NEM + PDV +N L+ + K G + EA ++L M + G +
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ ++N +++G+ + ++F T+ + PD +Y+ ++ F M +EA ++
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 187 KH 188
+
Sbjct: 608 RE 609
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAA 77
S P V+ + ++ +L + K+V+ A ++F + ++ PT TYN++I GQ E
Sbjct: 159 SVSPAVL--SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKV 216
Query: 78 VCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
+ EM + PD IT++ L+ + K GR A + M +P Y +L+
Sbjct: 217 HEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
Y V +V K D+F M + +P V++Y+ +I G K VDEA K
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYK 327
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L +++ + + P+V YN ++ + K ++N+A +L +M + ++
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ GF G A+ + + I PD +T+NTL+ + G +EA ++ M
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKD 149
+G + + +TY+S++D V V+ KD
Sbjct: 613 KGFEYDAITYSSILDA---VGNVDHEKD 637
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L ++++ + +Y +I K +++A +LF+EM + P V YN L+
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G G + A LL +M D+ + N +++ ++ G + A + + G KP
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
+ VTYN+L+ + + + M D +YS +++
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A +L R+I+ N V Y T+ID C+ +++A L M ++ SP V+TY
Sbjct: 287 GRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTY 345
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+++ C G++ A LL EM K I PD IT NTL++A K + A V MI+
Sbjct: 346 NSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIE 405
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G K ++ +Y +L+ G+C V E+ K+ +M + +P +YS +++GF DE
Sbjct: 406 SGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDE 465
Query: 182 ALNLLK 187
LL+
Sbjct: 466 ITKLLE 471
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL +++ K P++ YNT+I CK + +A ++ M ++P ++TY
Sbjct: 217 GDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTY 276
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+ I GF G+M A L E + + + +T+ TL+D + + EA + VM
Sbjct: 277 NSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMES 335
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P VVTYNS++ C + + + M+ ++ PD + + +IN +CKI+ +
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395
Query: 182 ALNLLKHPI 190
A+ + K I
Sbjct: 396 AVKVKKKMI 404
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 1/184 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ++ + QI+ +P++ +++SL K +L + + +F +MV + + Y
Sbjct: 147 GMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVY 206
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G E A LL+EM K + PD+ T+NTL+ K+ EA +V M +
Sbjct: 207 NVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMER 266
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN+VTYNS + G+ + + +F + +VT + +Y+ +I+G+C++ +DE
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDE 325
Query: 182 ALNL 185
AL L
Sbjct: 326 ALRL 329
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL+L ++ + P VV YN+I+ LC+D + +A L +EM K+I P IT NTLI
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+C + M +AV + +M+ + D+ ++ L+ K ++ AK L MI++G P
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
TY+ L+DG+ + ++ + + + DV Y +I CK++ VD A
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYA 501
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A +LL ++ GK +P+ + NT+I++ CK + + A + +M+ + + +Y
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI GFC V ++E A L M+ K +P T++ LVD + + E +L K
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +V Y L+ C +++V+ K +F +M + + D ++ M + + V E
Sbjct: 476 RGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTE 535
Query: 182 ALNLL 186
A L
Sbjct: 536 ASALF 540
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 14 IQGKSAQPNVV--MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
+ G S P V +++ ++ K ++ND+ +F ++ + + P + L+
Sbjct: 122 VGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQ 181
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
+ + +MV + ++ +N LV A SK G ++A+ +L+ M ++G P++ TY
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241
Query: 132 NSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
N+L+ YC + + + M + V P++ +Y+ I+GF + + EA L +
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR 297
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L+ ++ K +PNVV YN ++ + C+ K ++ A ++FSEM+ K + P TY
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI GF + A ++N+M + + + +NT+++ L K G+ +AK +L +IK
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 122 EGEKP-NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
E + +YNS++DG+ V + + + + M++ +P+V +++ +INGFCK +D
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 181 EALNL 185
AL +
Sbjct: 643 LALEM 647
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 98/179 (54%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL++ +++ + ++ Y +ID CK + AY LFSE+ + P V YN+LI
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF +G+M+AA+ L +MV I+ D+ T+ T++D L K+G + A ++ + ++ G P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ + + L++G + K + M + +VTP+V YS +I G + ++EA L
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 1 MGHTRPALQLLRQ-IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G T A ++L+ I+ K + YN+IID K + A + EM SP V+
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
T+ +LI GFC +M+ A+ + +EM + D+ + L+D K+ +K A + + +
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+ G PNV YNSL+ G+ + +++ D++ M ++ D+++Y+ MI+G K +
Sbjct: 687 PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNI 746
Query: 180 DEA---------LNLLKHPILYWMLYAKAIMLTGQFL 207
+ A L ++ IL+ M+ + GQFL
Sbjct: 747 NLASDLYSELLDLGIVPDEILH-MVLVNGLSKKGQFL 782
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 34/218 (15%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL L +++ + P+ VM++ +++ CK+ + A + M + RI+P+ + +T+I
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 67 G----------------------------------FCIVGQMEAAVCLLNEMVLKSINPD 92
G FC G+++AA L M K I P+
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 93 VITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFN 152
V+ +N ++ A + + A+++ + M+++G +PN TY+ L+DG+ K+ D+ N
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 153 TMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
M + Y+ +ING CK+ +A +L++ I
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A++++ ++ G +V+ ++++ CK + A +LF+ M + ++P + +
Sbjct: 324 GNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMF 383
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA------------------- 102
+ ++ FC +ME A+ M I P + +T++
Sbjct: 384 SVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE 443
Query: 103 ---------------LSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
K+G+V A + L +M ++G +PNVV YN++M +C +K ++
Sbjct: 444 SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLA 503
Query: 148 KDIFNTMTQMEVTPDVWSYSIMINGFCKIK 177
+ IF+ M + + P+ ++YSI+I+GF K K
Sbjct: 504 RSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP-TVITYNTLI 65
A+++ R++ + A+P+ ++++ + + CK + A +L EM K P + TY ++I
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
F G ME AV +++EMV I VI +LV+ K + +A ++ M +EG
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
P+ V ++ +++ +C E+ K + + M + + P MI G K + + AL +
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 186 LKHPILYWMLYA 197
W+ +
Sbjct: 438 FNDSFESWIAHG 449
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 87/168 (51%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ A L ++ PNV +YN++I ++ A +L+ +MV IS + TY T+
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G G + A L +E++ I PD I LV+ LSK+G+ +A +L M K+
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
PNV+ Y++++ G+ +N+ + + M + + D ++++++G
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 35 KDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLK-SINPDV 93
+++ +A +F ++++ P + ++ + C + A+ LL EM K +
Sbjct: 251 RERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 94 ITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT 153
T+ +++ A KEG ++EA V+ M+ G +V+ SL++GYC E+ K D+FN
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 154 MTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
M + + PD +S+M+ FCK +++A+
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF 402
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+ L +++ ++ Y T+ID L KD +N A +L+SE++ I P I
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ L+ G GQ A +L EM K + P+V+ ++T++ +EG + EA + M+
Sbjct: 768 HMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEML 827
Query: 121 KEGEKPNVVTYNSLMDG 137
++G + +N L+ G
Sbjct: 828 EKGIVHDDTVFNLLVSG 844
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ +++ P+ + ++ +I +L + + ++A + F + R P VI Y
Sbjct: 200 GLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVY 258
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G+C G++ A + EM L I P+V T++ ++DAL + G++ A +V A M+
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD 318
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN +T+N+LM + K ++N M ++ PD +Y+ +I C+ + ++
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLEN 378
Query: 182 ALNLL 186
A+ +L
Sbjct: 379 AVKVL 383
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 100/186 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ ++++ +PNV Y+ +ID+LC+ ++ A+++F++M+ +P IT+
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G+ E + + N+M PD IT+N L++A ++ ++ A VL MIK
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ + N T+N++ ++VN +++ M + + P+ +Y+I++ F K D
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 182 ALNLLK 187
L + K
Sbjct: 449 VLKMKK 454
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
KS P YN +ID K + + A++L M ++ + ++ T+ LI + G
Sbjct: 149 KSPHP----YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASE 204
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
AV N M PD I F+ ++ LS++ R EA++ + K+ +P+V+ Y +L+
Sbjct: 205 AVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVR 263
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
G+C E+++ + +F M + P+V++YSI+I+ C+ + A ++
Sbjct: 264 GWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+V++Y ++ C+ +++A +F EM I P V TY+ +I C GQ+ A
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ +M+ P+ ITFN L+ K GR ++ V M K G +P+ +TYN L++ +C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 140 LVKEVNKTKDIFNTM 154
+ + + NTM
Sbjct: 372 RDENLENAVKVLNTM 386
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+++L + K + N +NTI + K + VN A+ ++S+M+ + P +TYN L+
Sbjct: 379 AVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG-EK 125
F + + + EM K + P+V T+ LV G A + M++E
Sbjct: 439 MFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLT 498
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ 156
P++ Y ++ ++ K +++ M Q
Sbjct: 499 PSLSLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L +++ + + +V +Y ++I C+ + A+ LF E+ K +SP+ TY
Sbjct: 308 GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTY 367
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEG-------------- 107
LI G C VG+M AA L+NEM K +N + FNTL+D ++G
Sbjct: 368 GALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ 427
Query: 108 ---------------------RVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
R EAK L M++ G K + V+Y +L+D YC V +
Sbjct: 428 KGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEE 487
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
K +F M+ V P+ +Y++MI +CK + EA L
Sbjct: 488 AKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + A L ++ K P+ Y +ID +CK + A L +EM +K ++ T + +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT----------------------- 98
NTLI G+C G ++ A + + M K DV T NT
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 99 ------------LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
L+D KEG V+EAK + M +G +PN +TYN ++ YC ++ +
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + M + PD ++Y+ +I+G C VDEA+ L
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A L+ ++Q K V++NT+ID C+ +V++A ++ M K V T
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 61 YNT-----------------------------------LIFGFCIVGQMEAAVCLLNEMV 85
NT LI +C G +E A L EM
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
K + P+ IT+N ++ A K+G++KEA+ + A M G P+ TY SL+ G C+ V+
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ +F+ M + + +Y++MI+G K DEA L
Sbjct: 557 EAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGL 596
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N V Y +++ K+ ++DA LF EM + I V Y +LI C G M+ A L
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+E+ K ++P T+ L+D + K G + A+ ++ M +G V +N+L+DGYC
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
V++ I++ M Q DV++ + + + F ++K DEA
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A +L ++ K QPN + YN +I + CK + +A L + M + P TY
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI G CI ++ A+ L +EM LK ++ + +T+ ++ LSK G+ EA + M +
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Query: 122 EGEKPNVVTYNSLM 135
+G + Y +L+
Sbjct: 603 KGYTIDNKVYTALI 616
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L R ++G + + V Y +ID CK+ V +A LF EM +K + P ITYN +I+ +C
Sbjct: 457 LFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G+++ A L M ++PD T+ +L+ V EA + + M +G N V
Sbjct: 516 KQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSV 575
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
TY ++ G + ++ +++ M + T D Y+ +I
Sbjct: 576 TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%)
Query: 35 KDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVI 94
K + ++ +F MV + TV + ++ G C G++E + L+ E +K I P+
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 95 TFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTM 154
T+NT+++A K+ + VL VM K+G N VTY LM+ +++ + +F+ M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 155 TQMEVTPDVWSYSIMINGFCK 175
+ + DV Y+ +I+ C+
Sbjct: 321 RERGIESDVHVYTSLISWNCR 341
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L++ R++ + V +++ LC+ V + L E K I P TYNT+I
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFN----TLVDALS-KEGRVKEAKNVLAVMIKE 122
+ V Q + + E VLK + D + +N TL+ LS K G++ +A+ + M +
Sbjct: 269 Y--VKQRDFSGV---EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
G + +V Y SL+ C + + +F+ +T+ ++P ++Y +I+G CK+
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKV 377
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 89/167 (53%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
PN +N + + C D + + +M + P ++TYNTL+ +C G+++ A
Sbjct: 233 HPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFY 292
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L M + + PD++T+ +L+ L K+GRV+EA M+ G KP+ ++YN+L+ YC
Sbjct: 293 LYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYC 352
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++K + + M V PD ++ +++ GF + + A+N +
Sbjct: 353 KEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G ++ R++ +VV N +++ L K L+ D + ++S M I P T
Sbjct: 179 LGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYT 238
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N L FC L +M + PD++T+NTLV + + GR+KEA + +M
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ P++VTY SL+ G C V + F+ M + PD SY+ +I +CK M+
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358
Query: 181 EALNLLKHPIL 191
++ LL H +L
Sbjct: 359 QSKKLL-HEML 368
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 78/134 (58%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R L +++ + +P++V YNT++ S C+ + +A+ L+ M +R+ P ++TY +L
Sbjct: 253 REVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 312
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I G C G++ A + MV + I PD +++NTL+ A KEG ++++K +L M+
Sbjct: 313 IKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 372
Query: 125 KPNVVTYNSLMDGY 138
P+ T +++G+
Sbjct: 373 VPDRFTCKVIVEGF 386
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 36/221 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A L + + + P++V Y ++I LCKD V +A+ F MV + I P ++Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLA---- 117
NTLI+ +C G M+ + LL+EM+ S+ PD T +V+ +EGR+ A N +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 118 --------------------------------VMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
++ +EG + TYN+L++ +
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + + D +Y +I C+I EA +L+
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLM 505
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%)
Query: 24 VMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
V+++ ++ K LV + + +F E++ S +V+T N L+ G + ME + +
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
M I+P+ TFN L + + +E + L M +EG +P++VTYN+L+ YC
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ + ++ M + V PD+ +Y+ +I G CK V EA
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 40/223 (17%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A Q ++ + +P+ + YNT+I + CK+ ++ + L EM+ + P T
Sbjct: 320 GRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTC 379
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVI--------------------------- 94
++ GF G++ +AV + E L+ + D+
Sbjct: 380 KVIVEGFVREGRLLSAVNFVVE--LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Query: 95 -----------TFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
T+N L+++LS+ ++EA + + + + + TY +L+ C +
Sbjct: 438 IEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGR 497
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + + M EV PD + ++ G+CK D+A LL
Sbjct: 498 NREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%)
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
+ ++ L+ G+ +G +E + E++ + V+T N L++ L K +++ V +V
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
M + G PN T+N L + +C + D M + PD+ +Y+ +++ +C+
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 179 VDEALNLLK 187
+ EA L K
Sbjct: 287 LKEAFYLYK 295
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 2 GHTRPALQLLRQI---QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
G A LL +I +G A+P YN +I+SL + + +A L ++ +
Sbjct: 425 GKPFAAKHLLDRIIEEEGHEAKPET--YNNLIESLSRCDAIEEALVLKGKLKNQNQVLDA 482
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
TY LI C +G+ A L+ EM + PD LV KE +A+ +L++
Sbjct: 483 KTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSL 542
Query: 119 MIKEGEKPNVVTYNSLMDGYC 139
E + +YNSL+ C
Sbjct: 543 FAMEFRIFDPESYNSLVKAVC 563
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 89/167 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+V+ YN ++ + + + Y L EMV SP + TYN L+ + AA+ L
Sbjct: 255 PDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNL 314
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
LN M + P VI F TL+D LS+ G+++ K + +K G P+VV Y ++ GY
Sbjct: 315 LNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYIS 374
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
E+ K +++F MT+ P+V++Y+ MI GFC EA LLK
Sbjct: 375 GGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G T +LL ++ P++ YN ++ L A NL + M + P VI
Sbjct: 270 LGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIH 329
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ TLI G G++EA ++E V PDV+ + ++ G +++A+ + M
Sbjct: 330 FTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMT 389
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G+ PNV TYNS++ G+C+ + + + M P+ YS ++N V
Sbjct: 390 EKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVL 449
Query: 181 EALNLLK 187
EA ++K
Sbjct: 450 EAHEVVK 456
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+VV Y +I + A +F EM K P V TYN++I GFC+ G+ + A L
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACAL 419
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
L EM + NP+ + ++TLV+ L G+V EA V+ M+++G ++++
Sbjct: 420 LKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P YN I+ SL K ++ +M+ +P V+TYN ++F +G+ +
Sbjct: 219 RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYR 278
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
LL+EMV +PD+ T+N L+ L+ + A N+L M + G +P V+ + +L+DG
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ K + ++ TPDV Y++MI G+ +++A + K
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFK 386
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + +L+ ++ +N +I + + L D F + T P +Y
Sbjct: 166 GEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSY 225
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ V Q + + +M+ PDV+T+N ++ A + G+ +L M+K
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVK 285
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+G P++ TYN L+ + ++ N M ++ V P V ++ +I+G +
Sbjct: 286 DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 45 LFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV-LKSIN--PDVITFNTLVD 101
L EM+ T T+N LI C G+ A ++ + + K+ N P ++N ++
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 102 ALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
+L + K V M+++G P+V+TYN +M + + ++ + + M + +P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 162 DVWSYSIMINGFCKIKMVDEALNLLKH 188
D+++Y+I+++ ALNLL H
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNH 317
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 99/187 (52%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G ++LR + + NVV Y ++I CK L+ +A ++F + K++
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y L+ G+C GQ+ AV + + M+ + + N+L++ K G++ EA+ + + M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
KP+ TYN+L+DGYC V++ + + M Q EV P V +Y+I++ G+ +I
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 181 EALNLLK 187
+ L+L K
Sbjct: 454 DVLSLWK 460
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 97/182 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A Q+ ++ S +P+ YNT++D C+ V++A L +M K + PTV+TY
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G+ +G + L M+ + +N D I+ +TL++AL K G EA + ++
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G + +T N ++ G C +++VN+ K+I + + P V +Y + +G+ K+ + E
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 182 AL 183
A
Sbjct: 560 AF 561
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITYNTLIFGFCIVGQMEAAVC 79
PN ++YN I LCK + DA LFS++++ R P TY LI G I G + A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L +EM LK I P+++T+N L+ L K G V A+ +L + ++G PN +TYN+L+DG
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG-- 834
Query: 140 LVKEVN 145
LVK N
Sbjct: 835 LVKSGN 840
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NVV YN++I+ V + M + +S V+TY +LI G+C G ME A +
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+ K + D + L+D + G++++A V MI+ G + N NSL++GYC
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++ + + IF+ M + PD +Y+ +++G+C+ VDEAL L
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL 423
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 99/185 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A+++ + + N + N++I+ CK + +A +FS M + P TY
Sbjct: 345 GQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTY 404
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTL+ G+C G ++ A+ L ++M K + P V+T+N L+ S+ G + ++ +M+K
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G + ++ ++L++ + + N+ ++ + + D + ++MI+G CK++ V+E
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 182 ALNLL 186
A +L
Sbjct: 525 AKEIL 529
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
MY ++D C+ + DA + M+ + N+LI G+C GQ+ A + + M
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
S+ PD T+NTLVD + G V EA + M ++ P V+TYN L+ GY +
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWML 195
+ ++ M + V D S S ++ K+ +EA+ L ++ + +L
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G L L + + + + + +T++++L K N+A L+ ++ + + IT
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
N +I G C + ++ A +L+ + + P V T+ L K G +KEA V M
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G P + YN+L+ G + +NK D+ + +TP V +Y +I G+C I M+D
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 181 EA 182
+A
Sbjct: 629 KA 630
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ Y +I +N A+ L EM K I P ++TYN LI G C +G ++ A L
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
L+++ K I P+ IT+NTL+D L K G V EA + MI++G
Sbjct: 813 LHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 42 AYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLK-SINPDVITFNTLV 100
A +++ +M++ +SP V T + ++ +C G ++ A+ E + +V+T+N+L+
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 101 DALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVT 160
+ + G V+ VL +M + G NVVTY SL+ GYC + + + +F + + ++
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 161 PDVWSYSIMINGFCKIKMVDEALNL 185
D Y ++++G+C+ + +A+ +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRV 353
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 52 KRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVK 110
K + P I YN I G C G++E A L ++++ PD T+ L+ + G +
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 111 EAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
+A + M +G PN+VTYN+L+ G C + V++ + + + + Q +TP+ +Y+ +I
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 171 NGFCKIKMVDEALNL 185
+G K V EA+ L
Sbjct: 833 DGLVKSGNVAEAMRL 847
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A++L + + + + N +I LCK + VN+A + + R P V T
Sbjct: 484 LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT 543
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y L G+ VG ++ A + M K I P + +NTL+ K + + +++ +
Sbjct: 544 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 603
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G P V TY +L+ G+C + ++K M + +T +V S + N ++ +D
Sbjct: 604 ARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKID 663
Query: 181 EALNLLKHPILYWML 195
EA LL+ + + +L
Sbjct: 664 EACLLLQKIVDFDLL 678
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 106/204 (51%), Gaps = 14/204 (6%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+L+R + S P V ++ I+ + LV +A ++F M P++++ N+L+
Sbjct: 143 ELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP-- 126
G+ A+ + ++M+ ++PDV T + +V+A + G V +A V KE E
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA----MVFAKETESSLG 256
Query: 127 ---NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA- 182
NVVTYNSL++GY ++ +V + M++ V+ +V +Y+ +I G+CK +++EA
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 183 --LNLLKHPILYWMLYAKAIMLTG 204
LLK L + +++ G
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDG 340
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS------- 55
H L+ +++ + P V Y +I C +++ AY EM+ K I+
Sbjct: 591 HLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICS 650
Query: 56 -------------------PTVITYNTLIFGFCIVGQM---EAAVCLLNEMVLKSIN--- 90
++ ++ L+ G+ + + A CL + + +S+
Sbjct: 651 KIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENST 710
Query: 91 ------PDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK-PNVVTYNSLMDGYCLVKE 143
P+ I +N + L K G++++A+ + + ++ P+ TY L+ G + +
Sbjct: 711 PKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGD 770
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+NK + + M + P++ +Y+ +I G CK+ VD A LL
Sbjct: 771 INKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L ++ K PN+V YN +I LCK V+ A L ++ K I+P ITY
Sbjct: 769 GDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITY 828
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
NTLI G G + A+ L +M+ K LV K+G V K V+
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKG----------LVRGSDKQGDVDIPKEVV 873
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 91/172 (52%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
++GK +P+VV YN++ID CKD+ + AY L +M + +P VITY T+I G ++GQ
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
+ A +L EM PDV +N + R+ +A ++ M+K+G PN TYN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
L ++ ++ +++ M E P+ S +I F + + VD A+ L
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 91/161 (56%), Gaps = 4/161 (2%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
+N ++ +LC++K + DA N++ + + P + T+N L+ G+ E A EM
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
K + PDV+T+N+L+D K+ +++A ++ M +E E P+V+TY +++ G L+ + +
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
K +++ M + PDV +Y+ I FC + + +A L+
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 339
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 52 KRISPTVIT---YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR 108
KR+ P +N L+ C M A + + + PD+ TFN L LS
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNIL---LSGWKS 226
Query: 109 VKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSI 168
+EA+ M +G KP+VVTYNSL+D YC +E+ K + + M + E TPDV +Y+
Sbjct: 227 SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT 286
Query: 169 MINGFCKIKMVDEALNLLK 187
+I G I D+A +LK
Sbjct: 287 VIGGLGLIGQPDKAREVLK 305
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L+ +++ + P+V+ Y T+I L + A + EM P V YN I
Sbjct: 265 AYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIR 324
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALS 104
FCI ++ A L++EMV K ++P+ T+N LS
Sbjct: 325 NFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 362
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 38/194 (19%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A ++L++++ P+V YN I + C + + DA L EMV K +SP T
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 61 YNT-----------------------------------LIFGFCIVGQMEAAVCLLNEMV 85
YN LI F +++ A+ L +MV
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+K + + L+D L +V+EA+ L M+++G +P+ V++ + L++ N
Sbjct: 414 VKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIK---LLMELAN 470
Query: 146 KTKDIFNTMTQMEV 159
K ++ N + +M +
Sbjct: 471 KHDEVNNLIQKMAI 484
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ I+ +LC++ LVN A F +M+ P +I + +LI G C G ++ A +
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM 309
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK-EGEKPNVVTYNSLMDGYC 139
L EMV P+V T L+D L K G ++A + +++ + KPNV TY S++ GYC
Sbjct: 310 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++N+ + +F+ M + + P+V +Y+ +ING CK A L+
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ R++ +PN++ + ++ID LCK + A+ + EMV P V T+
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
LI G C G E A L ++V + P+V T+ +++ KE ++ A+ + + M
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G PNV TY +L++G+C + ++ N M P++++Y+ I+ CK
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 181 EALNLL 186
EA LL
Sbjct: 446 EAYELL 451
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Query: 2 GHTRPALQL-LRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G T A +L L+ ++ + +PNV Y ++I CK+ +N A LFS M + + P V T
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI G C G A L+N M + P++ T+N +D+L K+ R EA +L
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G + + VTY L+ C ++N+ F M + D+ +I+I FC+ K +
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 181 EALNLLK 187
E+ L +
Sbjct: 516 ESERLFQ 522
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Query: 2 GHTRP-----ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
GH + A +L+ + + PN+ YN IDSLCK +AY L ++ + +
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+TY LI C + A+ M D+ N L+ A ++ ++KE++ +
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+++ G P TY S++ YC +++ F+ M + PD ++Y +I+G CK
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 177 KMVDEALNL 185
MVDEA L
Sbjct: 582 SMVDEACKL 590
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 91/186 (48%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+ ++ +Q + P+ + N +++ + L+ A N+F EM + + P +
Sbjct: 160 IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y ++ G G+++ A L M+ + PD T ++ AL + G V A MI
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI 279
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G KPN++ + SL+DG C + + ++ M + P+V++++ +I+G CK +
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339
Query: 181 EALNLL 186
+A L
Sbjct: 340 KAFRLF 345
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 78/150 (52%)
Query: 39 VNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT 98
+N+A + +M + ++P+ IT N ++ +G +E A + +EM ++ + PD ++
Sbjct: 163 LNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKL 222
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
+V ++G+++EA L MI+ G P+ T ++ C VN+ F M +
Sbjct: 223 MVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282
Query: 159 VTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
P++ +++ +I+G CK + +A +L+
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEE 312
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL ++ + ++ + N +I + C+ K + ++ LF +V+ + PT TY ++I
Sbjct: 482 ALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMIS 541
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+C G ++ A+ + M PD T+ +L+ L K+ V EA + MI G P
Sbjct: 542 CYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME-VTPDVWSYSI--MINGFCKIKMVDEA 182
VT +L YC K D N M +E + +W ++ ++ C K V A
Sbjct: 602 PEVTRVTLAYEYC------KRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVA 654
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 7 ALQLLRQIQGKSA------QPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVI 59
AL++ Q++GK + + + +NT+ID LCK + +A L M + +R P +
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TYN LI G+C G++E A +++ M I P+V+T NT+V + + + A M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
KEG K NVVTY +L+ C V V K + M + +PD Y +I+G C+++
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 180 DEALNLLK 187
+A+ +++
Sbjct: 528 HDAIRVVE 535
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 42/210 (20%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK--------------- 52
+ L+ + PN V I SLCK+ N A+++ S+++
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 53 --------------------RISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS---- 88
+I P V+T LI C +++ A+ + +M K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 89 --INPDVITFNTLVDALSKEGRVKEAKNVLAVM-IKEGEKPNVVTYNSLMDGYCLVKEVN 145
I D I FNTL+D L K GR+KEA+ +L M ++E PN VTYN L+DGYC ++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
K++ + M + E+ P+V + + ++ G C+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ +Y +I LC+ + +DA + ++ S ++ YN LI FC E +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M + PD IT+NTL+ K + + ++ M ++G P V TY +++D YC
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 141 VKEVNKTKDIFNTMT-QMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
V E+++ +F M +V P+ Y+I+IN F K+ +AL+L
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +++ +++ +PNVV NTI+ +C+ +N A F +M + + V+TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNV------ 115
TLI C V +E A+ +M+ +PD + L+ L + R +A V
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 116 -----------------------------LAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
L M KEG+KP+ +TYN+L+ + K+
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + M + + P V +Y +I+ +C + +DEAL L K
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 1 MGHTRPALQLLRQIQ-GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G + A +LL +++ + PN V YN +ID C+ + A + S M I P V+
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
T NT++ G C + AV +M + + +V+T+ TL+ A V++A M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
++ G P+ Y +L+ G C V+ + + + + + D+ +Y+++I FC
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
++L ++ + +P+ + YNT+I K K + +M + PTV TY +I +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 69 CIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C VG+++ A+ L +M L S +NP+ + +N L++A SK G +A ++ M + +PN
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 128 VVTYNSL 134
V TYN+L
Sbjct: 687 VETYNAL 693
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR--ISPTVITYNTLIFGFCIVGQM- 74
S N + N ++D L ++ LV+DA+ + EM+ K P IT + ++ +
Sbjct: 180 SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLT 239
Query: 75 -EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
E + L++ ++P+ + + +L K R A ++L+ ++K +N+
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 134 LMDGYCLVK--EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
L+ CL + ++++ D+ M ++++ PDV + I+IN CK + VDEAL + +
Sbjct: 300 LLS--CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ 354
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++++ +++ +++ YN +I C Y + ++M + P ITYNTLI
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM-IKEGEK 125
F E+ ++ +M ++P V T+ ++DA G + EA + M +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI-------NGFCKIKM 178
PN V YN L++ + + + + M V P+V +Y+ + G +K+
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 179 VDEALNLLKHPI 190
+DE + L + I
Sbjct: 710 MDEMVEHLVNQI 721
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 77/174 (44%), Gaps = 8/174 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDA--YNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAV 78
PN + + ++ + K++L+ + L S + +SP + I C + A
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+L++++ + FN L+ L + + +++ M + +P+VVT L++
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 139 CLVKEVNKTKDIFNTMTQME------VTPDVWSYSIMINGFCKIKMVDEALNLL 186
C + V++ ++F M + D ++ +I+G CK+ + EA LL
Sbjct: 340 CKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 7/188 (3%)
Query: 7 ALQLLRQIQGKSA------QPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVI 59
AL++ Q++GK + + + +NT+ID LCK + +A L M + +R P +
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TYN LI G+C G++E A +++ M I P+V+T NT+V + + + A M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
KEG K NVVTY +L+ C V V K + M + +PD Y +I+G C+++
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 180 DEALNLLK 187
+A+ +++
Sbjct: 528 HDAIRVVE 535
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 42/210 (20%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK--------------- 52
+ L+ + PN V I SLCK+ N A+++ S+++
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 53 --------------------RISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS---- 88
+I P V+T LI C +++ A+ + +M K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 89 --INPDVITFNTLVDALSKEGRVKEAKNVLAVM-IKEGEKPNVVTYNSLMDGYCLVKEVN 145
I D I FNTL+D L K GR+KEA+ +L M ++E PN VTYN L+DGYC ++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
K++ + M + E+ P+V + + ++ G C+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ +Y +I LC+ + +DA + ++ S ++ YN LI FC E +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M + PD IT+NTL+ K + + ++ M ++G P V TY +++D YC
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 141 VKEVNKTKDIFNTMT-QMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
V E+++ +F M +V P+ Y+I+IN F K+ +AL+L
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +++ +++ +PNVV NTI+ +C+ +N A F +M + + V+TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNV------ 115
TLI C V +E A+ +M+ +PD + L+ L + R +A V
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 116 -----------------------------LAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
L M KEG+KP+ +TYN+L+ + K+
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + M + + P V +Y +I+ +C + +DEAL L K
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 1 MGHTRPALQLLRQIQ-GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G + A +LL +++ + PN V YN +ID C+ + A + S M I P V+
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
T NT++ G C + AV +M + + +V+T+ TL+ A V++A M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
++ G P+ Y +L+ G C V+ + + + + + D+ +Y+++I FC
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
++L ++ + +P+ + YNT+I K K + +M + PTV TY +I +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 69 CIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C VG+++ A+ L +M L S +NP+ + +N L++A SK G +A ++ M + +PN
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 128 VVTYNSL 134
V TYN+L
Sbjct: 687 VETYNAL 693
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVITYNTLIFG 67
+++ Q++ P V Y +ID+ C +++A LF +M + +++P + YN LI
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
F +G A+ L EM +K + P+V T+N L L+++ + + ++ M+++ +PN
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 128 VVTYNSLMD 136
+T LM+
Sbjct: 722 QITMEILME 730
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR--ISPTVITYNTLIFGFCIVGQM- 74
S N + N ++D L ++ LV+DA+ + EM+ K P IT + ++ +
Sbjct: 180 SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLT 239
Query: 75 -EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
E + L++ ++P+ + + +L K R A ++L+ ++K +N+
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 134 LMDGYCLVK--EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
L+ CL + ++++ D+ M ++++ PDV + I+IN CK + VDEAL + +
Sbjct: 300 LLS--CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQ 354
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++++ +++ +++ YN +I C Y + ++M + P ITYNTLI
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM-IKEGEK 125
F E+ ++ +M ++P V T+ ++DA G + EA + M +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI-------NGFCKIKM 178
PN V YN L++ + + + + M V P+V +Y+ + G +K+
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 179 VDE 181
+DE
Sbjct: 710 MDE 712
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 77/174 (44%), Gaps = 8/174 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAY--NLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAV 78
PN + + ++ + K++L+ + L S + +SP + I C + A
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+L++++ + FN L+ L + + +++ M + +P+VVT L++
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 139 CLVKEVNKTKDIFNTMTQME------VTPDVWSYSIMINGFCKIKMVDEALNLL 186
C + V++ ++F M + D ++ +I+G CK+ + EA LL
Sbjct: 340 CKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 7 ALQLLRQIQGKSA------QPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVI 59
AL++ +++GK + + + +NT+ID LCK + +A L M + +R +P +
Sbjct: 348 ALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAV 407
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TYN LI G+C G++E A +++ M I P+V+T NT+V + + + A M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
KEG K NVVTY +L+ C V V K + M + +PD Y +I+G C+++
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 180 DEALNLLK 187
+A+ +++
Sbjct: 528 HDAIRVVE 535
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 42/210 (20%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK--------------- 52
+ L+ + PN V I SLCK+ N A+++ S+++
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 53 --------------------RISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS---- 88
+I P V+T LI C +++ A+ + +M K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 89 --INPDVITFNTLVDALSKEGRVKEAKNVLAVM-IKEGEKPNVVTYNSLMDGYCLVKEVN 145
I D I FNTL+D L K GR+KEA+ +L M ++E PN VTYN L+DGYC ++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
K++ + M + E+ P+V + + ++ G C+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ +Y +I LC+ + +DA + ++ S ++ YN LI FC E +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEM 568
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M + PD IT+NTL+ K + + ++ M ++G P V TY +++D YC
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 141 VKEVNKTKDIFNTMT-QMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
V E+++ +F M +V P+ Y+I+IN F K+ +AL+L
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +++ +++ +PNVV NTI+ +C+ +N A F +M + + V+TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNV------ 115
TLI C V +E A+ +M+ +PD + L+ L + R +A V
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 116 -----------------------------LAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
L M KEG+KP+ +TYN+L+ + K+
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + M + + P V +Y +I+ +C + +DEAL L K
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 1 MGHTRPALQLLRQIQ-GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G + A +LL +++ + PN V YN +ID C+ + A + S M I P V+
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
T NT++ G C + AV +M + + +V+T+ TL+ A V++A M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
++ G P+ Y +L+ G C V+ + + + + + D+ +Y+++I FC
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
+T ++L ++ + +P+ + YNT+I K K + +M + PTV TY
Sbjct: 561 NTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I +C VG+++ A+ L +M L S +NP+ + +N L++A SK G +A ++ M
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 122 EGEKPNVVTYNSL 134
+ +PNV TYN+L
Sbjct: 681 KMVRPNVETYNAL 693
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVITYNTLIFG 67
+++ Q++ P V Y +ID+ C +++A LF +M + +++P + YN LI
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
F +G A+ L EM +K + P+V T+N L L+++ + + ++ M+++ +PN
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 128 VVTYNSLMD 136
+T LM+
Sbjct: 722 QITMEILME 730
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR--ISPTVITYNTLIFGFCIVGQM- 74
S N + N ++D L ++ LV+DA+ + EM+ K P IT + ++ G++
Sbjct: 180 SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITAD-IVLHEVWKGRLL 238
Query: 75 --EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
E + L++ ++P+ + + +L K R A ++L+ ++K +N
Sbjct: 239 TEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFN 298
Query: 133 SLMDGYCLVK--EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+L+ CL + ++++ D+ M ++++ PDV + I+IN CK + VDEAL + +
Sbjct: 299 ALLS--CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++++ +++ +++ YN +I C Y + ++M + P ITYNTLI
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM-IKEGEK 125
F E+ ++ +M ++P V T+ ++DA G + EA + M +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI-------NGFCKIKM 178
PN V YN L++ + + + + M V P+V +Y+ + G +K+
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 179 VDE 181
+DE
Sbjct: 710 MDE 712
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 77/174 (44%), Gaps = 8/174 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAY--NLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAV 78
PN + + ++ + K +L+ + L S + +SP + I C + AA
Sbjct: 220 PNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAW 279
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+L++++ + FN L+ L + + +++ M + +P+VVT L++
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 139 CLVKEVNKTKDIFNTMTQME------VTPDVWSYSIMINGFCKIKMVDEALNLL 186
C + V++ ++F M + D ++ +I+G CK+ + EA LL
Sbjct: 340 CKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Query: 2 GHTRPA---LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
G R A L+ LR G +P++V +N++ + K K++++ + ++ ++ K SP V
Sbjct: 105 GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNV 163
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
+TY+T I FC G+++ A+ + M +++P+V+TF L+D K G ++ A ++
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
M + NVVTY +L+DG+C E+ + +++++ M + V P+ Y+ +I+GF +
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 179 VDEALNLL 186
D A+ L
Sbjct: 284 SDNAMKFL 291
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K PNVV Y+T ID+ CK + A F M +SP V+T+ LI G+C G +E
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEV 216
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
AV L EM ++ +V+T+ L+D K+G ++ A+ + + M+++ +PN + Y +++D
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
G+ + + M + D+ +Y ++I+G C + EA +++
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + AL+ ++ + PNVV + +ID CK + A +L+ EM R+S V+TY
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI GFC G+M+ A + + MV + P+ + + T++D + G A LA M+
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G + ++ Y ++ G C ++ + +I M + ++ PD+ ++ M+N + K +
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 182 ALNL 185
A+N+
Sbjct: 357 AVNM 360
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 91/182 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L ++++ NVV Y +ID CK + A ++S MV R+ P + Y
Sbjct: 212 GDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVY 271
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T+I GF G + A+ L +M+ + + D+ + ++ L G++KEA ++ M K
Sbjct: 272 TTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P++V + ++M+ Y + ++++ + + PDV + S MI+G K + E
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Query: 182 AL 183
A+
Sbjct: 392 AI 393
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R ALQ L +++ S P+ N I L + + +V++ +P ++N++
Sbjct: 3 REALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSV 62
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL-------- 116
+ C +GQ++ A +++ M PDVI++N+L+D + G ++ A VL
Sbjct: 63 VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHG 122
Query: 117 ------------------------------AVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
VM+K PNVVTY++ +D +C E+
Sbjct: 123 FICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSGELQL 181
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
F++M + ++P+V +++ +I+G+CK ++ A++L K
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+L +I P+ MY + I LCK + DA+ L + MV + + ++ Y TLI+G
Sbjct: 424 RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
G M A + +EM+ I+PD F+ L+ A KEG + A ++L M + G
Sbjct: 484 ASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+ N VMY +ID+LCK+ + LFS++ + P Y + I G C G + A
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
L MV + + D++ + TL+ L+ +G + EA+ V M+ G P+ ++ L+ Y
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A+ + ++ + +P+VV +T+ID + K+ +++A F + K + Y
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC--IEK---ANDVMY 406
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI C G L +++ + PD + + + L K+G + +A + M++
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
EG +++ Y +L+ G + + + +F+ M ++PD + ++I + K +
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526
Query: 182 ALNLL 186
A +LL
Sbjct: 527 ASDLL 531
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN+ N ++ +LCK + AY + E+ + + P ++TY T++ G+ G ME+A +
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L EM+ + PD T+ L+D K GR EA V+ M K +PN VTY ++ C
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
K+ + +++F+ M + PD +I+ C+ VDEA L +
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWR 355
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A ++ ++ +PN V Y +I +LCK+K +A N+F EM+ + P
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+I C +++ A L +M+ + PD +TL+ L KEGRV EA+ +
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE 393
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K G P+++TYN+L+ G C E+ + +++ M + + P+ ++Y+++I G K V
Sbjct: 394 K-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452
Query: 181 EALNLLKH 188
E + +L+
Sbjct: 453 EGVRVLEE 460
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLF-SEMVTKRISPTVIT 60
G ++++ +I + +V NT+++ L +++ + + +F + + I+P + T
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
N L+ C +E+A +L+E+ + P+++T+ T++ G ++ AK VL M+
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G P+ TY LMDGYC + ++ + + M + E+ P+ +Y +MI CK K
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 181 EALNLL 186
EA N+
Sbjct: 314 EARNMF 319
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L R++ + P+ + +T+I LCK+ V +A LF E I P+++TYNTLI
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIA 408
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C G++ A L ++M + P+ T+N L++ LSK G VKE VL M++ G P
Sbjct: 409 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFN--TMTQMEVTPDVWSYSIMINGF 173
N T+ L +G ++++ K +D +M M D S+ + + F
Sbjct: 469 NKTTFLILFEG---LQKLGKEEDAMKIVSMAVMNGKVDKESWELFLKKF 514
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++L +I PN+V Y TI+ + A + EM+ + P TY L+
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C +G+ A ++++M I P+ +T+ ++ AL KE + EA+N+ M++ P
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++D C +V++ ++ M + PD S +I+ CK V EA L
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + ++ +S P+ + +ID+LC+D V++A L+ +M+ P +TLI
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH 374
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G++ A L +E SI P ++T+NTL+ + ++G + EA + M + KP
Sbjct: 375 WLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N TYN L++G V + + M ++ P+ ++ I+ G K+ ++A+ ++
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Query: 187 KHPIL-------YWMLYAK 198
++ W L+ K
Sbjct: 494 SMAVMNGKVDKESWELFLK 512
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 90/168 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++ +Y II LC +K +AY +F + K +P + Y T+I GFC G + +A L
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
EM+ K + P+ +N ++ K G + + M++ G +++ N+++ G+C
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ ++ +IF M++ VTP+ +Y+ +I GFCK V++ L L K
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKE 448
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + + ++ K P+ V+Y T+I C+ + A L+ EM+ K + P YN +I
Sbjct: 302 AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIH 361
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G G++ NEM+ +++ NT++ G+ EA + M + G P
Sbjct: 362 GHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTP 421
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
N +TYN+L+ G+C +V K ++ + + + P +Y+ ++ V +LNL
Sbjct: 422 NAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G +LL+Q + P +Y +I C+ + M+ P++ Y
Sbjct: 227 GDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIY 286
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I G C+ + A C+ + K PD + + T++ ++G + A+ + MIK
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK 346
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G +PN YN ++ G+ E++ + +N M + + S + MI GFC DE
Sbjct: 347 KGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDE 406
Query: 182 ALNLLKH 188
A + K+
Sbjct: 407 AFEIFKN 413
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P + + L ++ LV +A +++ + IS +V+T N+++ G +++
Sbjct: 142 KPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWE 201
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L EMV + + I L+ AL G V E +L +K+G P Y L+ G+C
Sbjct: 202 LHKEMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC 259
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ ++ +TM P ++ Y +I G C K EA + K+
Sbjct: 260 EIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKN 308
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
PN+ + ++D L K +DA +F +M + ISP +TY LI G C G + A
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARK 254
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L EM PD + N L+D K GR+ EA +L + K+G + Y+SL+DG
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + +++ M + + PD+ Y+I+I G K +++AL LL
Sbjct: 315 RARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L + K+ +P++++Y +I L K + DA L S M +K ISP YN +I
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G +E L EM PD T L+ ++ + G V+EA+ + + K G P
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSP 441
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDI-----------------------FNTMTQ------- 156
+V T+N+L+DG C E+ + + + F+TM +
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKA 501
Query: 157 ---------MEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+PD+ SY+++INGFC+ +D AL LL
Sbjct: 502 YRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 35/216 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A ++ + G+ PN V Y +I LC+ +DA LF EM T P + +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 62 NTLIFGFCIVGQMEAAVCLLN-----------------------------------EMVL 86
N L+ GFC +G+M A LL M+
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
K+I PD+I + L+ LSK G++++A +L+ M +G P+ YN+++ C + +
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ + M++ E PD +++I+I C+ +V EA
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREA 427
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 96/186 (51%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +LLR + + Y+++ID L + + A+ L++ M+ K I P +I
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL 340
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI G G++E A+ LL+ M K I+PD +N ++ AL G ++E +++ M
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ P+ T+ L+ C V + ++IF + + +P V +++ +I+G CK +
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 181 EALNLL 186
EA LL
Sbjct: 461 EARLLL 466
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 39/224 (17%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+LL + K P+ YN +I +LC L+ + +L EM P T+
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAK-------- 113
LI C G + A + E+ +P V TFN L+D L K G +KEA+
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Query: 114 -------------------------------NVLAVMIKEGEKPNVVTYNSLMDGYCLVK 142
LA G P++V+YN L++G+C
Sbjct: 472 GRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAG 531
Query: 143 EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++ + N + ++PD +Y+ +ING ++ +EA L
Sbjct: 532 DIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
Q L +++ + + +I + K + A F M P V TYN ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-- 170
Query: 69 CIVGQMEA----AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
++ + E A + NEM+ + +P++ TF L+D L K+GR +A+ + M G
Sbjct: 171 -VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGI 229
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
PN VTY L+ G C + + +F M PD +++ +++GFCK+ + EA
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFE 289
Query: 185 LLK 187
LL+
Sbjct: 290 LLR 292
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 41/182 (22%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-------- 53
G R A ++ +I+ P+V +N +ID LCK + +A L +M R
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 54 -------------------------------ISPTVITYNTLIFGFCIVGQMEAAVCLLN 82
SP +++YN LI GFC G ++ A+ LLN
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 83 EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK 142
+ LK ++PD +T+NTL++ L + GR +EA + K+ + + Y SLM C +
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRKR 599
Query: 143 EV 144
+V
Sbjct: 600 KV 601
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 32/217 (14%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + L + P++V YN +I+ C+ ++ A L + + K +SP +TY
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 62 NTLIFGFCIVGQMEAAVCLL--------NEMVLKSI-------NPDVITFNTLVDALSKE 106
NTLI G VG+ E A L + V +S+ ++ FN + L K
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKI 615
Query: 107 GRV-KEAKNVLAVMIKEGEKPNVVT----------------YNSLMDGYCLVKEVNKTKD 149
+ E N + KEGE + Y + G C ++
Sbjct: 616 SCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALM 675
Query: 150 IFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+F+ + + ++ S +I+G CK + +D A+ +
Sbjct: 676 VFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 96/185 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + R ++ + + +VV YN ++ K +N + L EM + ISP V TY
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI + G ++ A +++E++ + P + F ++ SK G +EA + M
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
KP+VVT ++L+ GYC + + K +FN + + PDV Y+ +I+G+C + +++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 182 ALNLL 186
A L+
Sbjct: 637 ACELI 641
Score = 96.7 bits (239), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 5/191 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A++L+ + +PN+ +Y++ + ++C + A +F E+ + P +
Sbjct: 354 VGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT-LVDALSKEGRVKEAKNVLAVM 119
Y T+I G+C +G+ + A + LKS NP +T +T L+ A S+ G + +A++V M
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGAL-LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
EG K +VVTYN+LM GY ++NK ++ + M ++PDV +Y+I+I+ +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 180 DEALNLLKHPI 190
DEA ++ I
Sbjct: 530 DEANEIISELI 540
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 86/166 (51%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+L+ +++ P+V YN +I S+ +++A + SE++ + P+ + + +I G
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
F G + A L M + PDV+T + L+ K R+++A + ++ G KP+
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
VV YN+L+ GYC V ++ K ++ M Q + P+ ++ ++ G
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 75/136 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A +++ ++ + P+ + + +I K +A+ L+ M R+ P V+T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ L+ G+C +ME A+ L N+++ + PDV+ +NTL+ G +++A ++ +M++
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
Query: 122 EGEKPNVVTYNSLMDG 137
G PN T+++L+ G
Sbjct: 647 RGMLPNESTHHALVLG 662
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 32/152 (21%)
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
I +C G + LL M I PD++ F +D L K G +KEA +VL + G
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 124 EKPNVVTYNSLMDGYCLV--------------------------------KEVNKTKDIF 151
+ V+ +S++DG+C V ++ + IF
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
+ ++ + PD Y+ MI+G+C + D+A
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 96/185 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + R ++ + + +VV YN ++ K +N + L EM + ISP V TY
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI + G ++ A +++E++ + P + F ++ SK G +EA + M
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
KP+VVT ++L+ GYC + + K +FN + + PDV Y+ +I+G+C + +++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 182 ALNLL 186
A L+
Sbjct: 637 ACELI 641
Score = 96.7 bits (239), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 5/191 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A++L+ + +PN+ +Y++ + ++C + A +F E+ + P +
Sbjct: 354 VGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNT-LVDALSKEGRVKEAKNVLAVM 119
Y T+I G+C +G+ + A + LKS NP +T +T L+ A S+ G + +A++V M
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGAL-LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
EG K +VVTYN+LM GY ++NK ++ + M ++PDV +Y+I+I+ +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 180 DEALNLLKHPI 190
DEA ++ I
Sbjct: 530 DEANEIISELI 540
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 86/166 (51%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+L+ +++ P+V YN +I S+ +++A + SE++ + P+ + + +I G
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
F G + A L M + PDV+T + L+ K R+++A + ++ G KP+
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
VV YN+L+ GYC V ++ K ++ M Q + P+ ++ ++ G
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 75/136 (55%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A +++ ++ + P+ + + +I K +A+ L+ M R+ P V+T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ L+ G+C +ME A+ L N+++ + PDV+ +NTL+ G +++A ++ +M++
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ 646
Query: 122 EGEKPNVVTYNSLMDG 137
G PN T+++L+ G
Sbjct: 647 RGMLPNESTHHALVLG 662
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 32/152 (21%)
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
I +C G + LL M I PD++ F +D L K G +KEA +VL + G
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 124 EKPNVVTYNSLMDGYCLV--------------------------------KEVNKTKDIF 151
+ V+ +S++DG+C V ++ + IF
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
+ ++ + PD Y+ MI+G+C + D+A
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 3/181 (1%)
Query: 9 QLLRQIQGKS---AQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLI 65
+LL +I S A ++V+ ++DS K+ V A ++ EM K + + YN +I
Sbjct: 248 KLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII 307
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
G C G M AA + +MV + +NPDV T+NTL+ AL KEG+ EA ++ M G
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
P+ ++Y ++ G C+ +VN+ + +M + + P+V ++++I+G+ + AL++
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 186 L 186
L
Sbjct: 428 L 428
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ AL++ +++ K+ + V+YN II LC + AY +MV + ++P V TY
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY 338
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI C G+ + A L M + PD I++ ++ L G V A L M+K
Sbjct: 339 NTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLK 398
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
P V+ +N ++DGY + + + N M V P+V++ + +I+G+ K
Sbjct: 399 SSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 71/115 (61%)
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+++++ C+ G+++AA+ L +M+ + P +IT N L++ L K G +++A ++ M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+ G PN V+YN+L+ G C V V+K +FNTM + + P+ + +I+++ C+
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL L +++ P ++ +N +++ LCK + A L EM SP ++Y
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRV------------ 109
NTLI G C V ++ A+ L N M I P+ +T N +V AL ++G +
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 110 --KEAKNVLAVMI---------------------KEGEKPNV----VTYNSLMDGYCLVK 142
+A L ++I KE + NV V YN ++ G C
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 143 EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ M + V PDV++Y+ +I+ CK DEA +L
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L +Q P+ + Y II LC VN A M+ + P V+ +
Sbjct: 349 GKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I G+ G +A+ +LN M+ + P+V T N L+ K GR+ +A V M
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+ TYN L+ C + + +++ M + PD+ +Y+ ++ G C + +
Sbjct: 469 TKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKK 528
Query: 182 ALNLL 186
A +LL
Sbjct: 529 AESLL 533
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P V+++N +ID + + A ++ + M++ + P V T N LI G+ G++ A +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
NEM I+PD T+N L+ A G ++ A + M++ G +P+++TY L+ G C
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ K + + + + +T D + I+ + +++ EA
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
++++I+ LC ++ A L +M+ + P +IT+N L+ G C G +E A L+ EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+P+ +++NTL+ L V +A + M K G +PN VT N ++ C
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%)
Query: 49 MVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR 108
M+ I PT ITYN++I GFC +++ A +L+ M K +PDV+TF+TL++ K R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 109 VKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSI 168
V + M + G N VTY +L+ G+C V +++ +D+ N M V PD ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 169 MINGFCKIKMVDEALNLLK 187
M+ G C K + +A +L+
Sbjct: 121 MLAGLCSKKELRKAFAILE 139
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P + YN++ID CK V+DA + M +K SP V+T++TLI G+C +++ + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
EM + I + +T+ TL+ + G + A+++L MI G P+ +T++ ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 141 VKEVNKTKDIFNTMTQME 158
KE+ K I + + E
Sbjct: 128 KKELRKAFAILEDLQKSE 145
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 68/115 (59%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++L + K P+VV ++T+I+ CK K V++ +F EM + I +TY TLI
Sbjct: 29 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 88
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
GFC VG ++AA LLNEM+ + PD ITF+ ++ L + +++A +L + K
Sbjct: 89 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 67/107 (62%)
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
M+ SI P IT+N+++D K+ RV +AK +L M +G P+VVT+++L++GYC K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
V+ +IF M + + + +Y+ +I+GFC++ +D A +LL I
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 107
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTII----DSLCKDKLVNDAYNLFSEMVT-KRISP 56
G TR A+ L +++ +P+ +YN +I + K K + +M +R P
Sbjct: 147 GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQP 206
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
V+TYN L+ F G+++ L ++ + ++PDV TFN ++DA K G +KE + VL
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
M KP+++T+N L+D Y +E K + F ++ + + P + +++ MI + K
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 177 KMVDEA 182
+M+D+A
Sbjct: 327 RMIDKA 332
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 3 HTRPALQLLRQIQG--------KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI 54
HTR + L +++G + QPNVV YN ++ + + V+ LF ++ +
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 55 SPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKN 114
SP V T+N ++ + G ++ +L M PD+ITFN L+D+ K+ ++ +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 115 VLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS--IMING 172
+++ EKP + T+NS++ Y + ++K + +F M M P +Y IM+ G
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 173 FC 174
+C
Sbjct: 360 YC 361
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 79/178 (44%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+L +++ +P+++ +N +IDS K + F ++ + PT+ T+N++I +
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
++ A + +M + P IT+ ++ G V A+ + + +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
T N++++ YC + +F+ + V PD +Y + + K M ++ L+K
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 56 PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA-LSKEGRVKEAKN 114
P Y+ LI GQ A+ L +EM PD +N L+ A L + K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 115 VLAVMIK----EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
V + K E +PNVVTYN L+ + +V++ +F + V+PDV++++ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 171 NGFCKIKMVDE 181
+ + K M+ E
Sbjct: 251 DAYGKNGMIKE 261
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L + + P+V +N ++D+ K+ ++ + + + M + P +IT+N LI +
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG 289
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+ E ++ P + TFN+++ K + +A+ V M P+ +
Sbjct: 290 KKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFI 349
Query: 130 TYNS--LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
TY +M GYC V++ ++IF + + + + + M+ +C+ + EA L
Sbjct: 350 TYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTII----DSLCKDKLVNDAYNLFSEMVT-KRISP 56
G TR A+ L +++ +P+ +YN +I + K K + +M +R P
Sbjct: 147 GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQP 206
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
V+TYN L+ F G+++ L ++ + ++PDV TFN ++DA K G +KE + VL
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
M KP+++T+N L+D Y +E K + F ++ + + P + +++ MI + K
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 177 KMVDEA 182
+M+D+A
Sbjct: 327 RMIDKA 332
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 3 HTRPALQLLRQIQG--------KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI 54
HTR + L +++G + QPNVV YN ++ + + V+ LF ++ +
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 55 SPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKN 114
SP V T+N ++ + G ++ +L M PD+ITFN L+D+ K+ ++ +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 115 VLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS--IMING 172
+++ EKP + T+NS++ Y + ++K + +F M M P +Y IM+ G
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 173 FC 174
+C
Sbjct: 360 YC 361
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 79/178 (44%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+L +++ +P+++ +N +IDS K + F ++ + PT+ T+N++I +
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
++ A + +M + P IT+ ++ G V A+ + + +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
T N++++ YC + +F+ + V PD +Y + + K M ++ L+K
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 56 PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA-LSKEGRVKEAKN 114
P Y+ LI GQ A+ L +EM PD +N L+ A L + K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 115 VLAVMIK----EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
V + K E +PNVVTYN L+ + +V++ +F + V+PDV++++ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 171 NGFCKIKMVDE 181
+ + K M+ E
Sbjct: 251 DAYGKNGMIKE 261
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L + + P+V +N ++D+ K+ ++ + + + M + P +IT+N LI +
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYG 289
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+ E ++ P + TFN+++ K + +A+ V M P+ +
Sbjct: 290 KKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFI 349
Query: 130 TYNS--LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
TY +M GYC V++ ++IF + + + + + M+ +C+ + EA L
Sbjct: 350 TYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+VV Y+T+I++ C+ AY LF EM K + V+TY +LI F G A LL
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
++M ++PD I + T++D L K G V +A V MI+ P+ ++YNSL+ G C
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
V + +F M E PD ++ +I G + K + A
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
Q + YN ++ C+ + YN + + R V++Y+TLI FC A
Sbjct: 287 QLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYR 346
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L EM K + +V+T+ +L+ A +EG AK +L M + G P+ + Y +++D C
Sbjct: 347 LFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLC 406
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
V+K +FN M + E+TPD SY+ +I+G C+ V EA+ L +
Sbjct: 407 KSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMV-TKRISPTVIT 60
G A+++ + P+ ++ LC + V+ AY + +E + + R+ + +
Sbjct: 163 GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI GFC G++E A L + M PD++T+N L++ +K A+ V+A M+
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP----DVWSYSIMINGFCKI 176
+ G + + +YN L+ +C V +K +N M + E+ P DV SYS +I FC+
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKC---YNFMVK-EMEPRGFCDVVSYSTLIETFCRA 338
Query: 177 KMVDEALNLLKH 188
+A L +
Sbjct: 339 SNTRKAYRLFEE 350
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G++ A +LL Q+ P+ + Y TI+D LCK V+ AY +F++M+ I+P I+Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI G C G++ A+ L +M K PD +TF ++ L + ++ A V M+
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 122 EGEKPNVVTYNSLMDGYC 139
+G + ++L+ C
Sbjct: 494 KGFTLDRDVSDTLIKASC 511
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+Q+ +++ S + YN I L ++ A ++ +M S TY+ I
Sbjct: 28 AVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFIS 87
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C V + + LL++M PD+ FN +D L +E +V A M++ G +P
Sbjct: 88 GLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREP 147
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+VV+Y L++G +V +I+N M + V+PD + + ++ G C + VD A ++
Sbjct: 148 DVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMV 207
Query: 187 KHPI 190
I
Sbjct: 208 AEEI 211
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++ +N +D LC++ V A F MV + P V++Y LI G G++ AV +
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE-KPNVVTYNSLMDGYC 139
N M+ ++PD LV L +V A ++A IK K + V YN+L+ G+C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC 231
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ K + + + M+++ PD+ +Y++++N + M+ A
Sbjct: 232 KAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
+TR A +L +++ K NVV Y ++I + ++ + A L +M +SP I Y
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
T++ C G ++ A + N+M+ I PD I++N+L+ L + GRV EA + M +
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
P+ +T+ ++ G K+++ +++ M T D +I C +
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y + I +L K ++++A +F EM YN I + E A + +M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ T++ + L K + +L+ M G P++ +N +D C +V
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
F M Q PDV SY+I+ING + V +A+ +
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG+ A L ++ + + + V YN D+L K V +A LF EM K I+P VI
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TLI G C+ G+ A L+ EM PD++ +N L L+ G +EA L +M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G KP VT+N +++G E++K + + ++ D + M+ GFC +D
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGCLD 549
Query: 181 EALN 184
A
Sbjct: 550 HAFE 553
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
++ P L + R+++ P+VV Y +I+ C + Y LF +M + I P V+TY
Sbjct: 678 NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYT 737
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
L+ + + L EM + PDV + L+D K G + EAK + MI+
Sbjct: 738 VLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIES 790
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
G P+ Y +L+ C + + + K IF+ M + V PDV Y+ +I G C+ V +A
Sbjct: 791 GVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKA 850
Query: 183 LNLLKH 188
+ L+K
Sbjct: 851 VKLVKE 856
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 29/215 (13%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L+ ++ G P++V+YN + L + L +A+ M + + PT +T+
Sbjct: 445 GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTH 504
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSIN-----------------------------PD 92
N +I G G+++ A + KS P
Sbjct: 505 NMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPK 564
Query: 93 VITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFN 152
+ F +++ + +A+++L M K G +P Y L+ +C V V K ++ F
Sbjct: 565 SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFE 624
Query: 153 TMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ ++ PD+++Y+IMIN +C++ +A L +
Sbjct: 625 ILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 6/171 (3%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
P+V +Y+ II+ K+ + A ++F++M+ KR + ++++ +C +G A
Sbjct: 323 DPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYD 382
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L E +I+ D + +N DAL K G+V+EA + M +G P+V+ Y +L+ G C
Sbjct: 383 LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC 442
Query: 140 LVKEVNKTKDIFNTMTQME---VTPDVWSYSIMINGFCKIKMVDEALNLLK 187
L K D F+ M +M+ TPD+ Y+++ G + EA LK
Sbjct: 443 L---QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLK 490
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A LL ++ +P MY +I + C+ V A F +VTK+I P + TY +I
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+C + + + A L +M + + PDV+T++ L+++ E +K V+ P
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKREMEAFDVI------P 696
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
+VV Y +++ YC + ++ K +F M + E+ PDV +Y++++
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL 740
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 2 GHTR-----PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
GH + A+ + ++ K + N V+ ++I+ C+ ++AY+LF E IS
Sbjct: 335 GHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISL 394
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+ YN +G++E A+ L EM K I PDVI + TL+ +G+ +A +++
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME---VTPDVWSYSIMINGF 173
M G+ P++V YN L G + ++ F T+ ME V P +++++I G
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGG---LATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGL 511
Query: 174 CKIKMVDEA 182
+D+A
Sbjct: 512 IDAGELDKA 520
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 25 MYNTIIDSLCKDK-LVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
+Y T+ SLC +K ++ A +L M + P Y LI +C V + A
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
+V K I PD+ T+ +++ + K+A + M + KP+VVTY+ L++
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS------ 679
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ D+ M +V PDV Y+IMIN +C + + + L K
Sbjct: 680 -DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFK 722
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRI----SPTVITYNTL 64
+LL ++ + V Y I+ LC +++ + AY L + I S I Y +
Sbjct: 238 KLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKV 297
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ G C ++E A ++ +M I+PDV ++ +++ K + +A +V M+K+ +
Sbjct: 298 VRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK 357
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
+ N V +S++ YC + ++ D+F + ++ D Y++ + K+ V+EA+
Sbjct: 358 RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 185 LLKH 188
L +
Sbjct: 418 LFRE 421
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 66/130 (50%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+P L R+++ +P+V Y +ID CK + +A +F +M+ + P Y L
Sbjct: 743 KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I C +G ++ A + + M+ + PDV+ + L+ + G V +A ++ M+++G
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Query: 125 KPNVVTYNSL 134
KP + +++
Sbjct: 863 KPTKASLSAV 872
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A ++ Q+ P+ Y +I CK + +A +F M+ + P V+
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVP 833
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINP 91
Y LI G C G + AV L+ EM+ K I P
Sbjct: 834 YTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
N +I LC+ + A L E ++ P V+T++ LI GFC G+ E A LL M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ I PD ITFN L+ L K+GRV+E ++L M +G +PN TY ++ G K +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
K++ + M + P SY M+ G C+ K V E
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVE 360
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ ALQLL + + ++PNV+ ++ +I C +A+ L M +RI P IT+
Sbjct: 216 GNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITF 275
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI G G++E + LL M +K P+ T+ ++ L + R EAK +++ MI
Sbjct: 276 NILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMIS 335
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
G +P+ ++Y ++ G C K V + + M P
Sbjct: 336 WGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 59/130 (45%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +LL +++ + +P+ + +N +I L K V + +L M K P TY
Sbjct: 251 GKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTY 310
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+++G + A ++++M+ + P +++ +V L + V E VL M+
Sbjct: 311 QEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVN 370
Query: 122 EGEKPNVVTY 131
G P + +
Sbjct: 371 HGFVPKTLMW 380
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 87/161 (54%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+++ YN ++D+LCK V+ Y +F EM + P ++ I +C G + +A +L
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+ M + P+V TFN ++ L K +V +A +L MI++G P+ TYNS+M +C
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
EVN+ + + M + + PD +Y++++ +I D A
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRA 402
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P V + ++ SLC K VN A F + I P+ TY+ L+ G+ + A
Sbjct: 170 KPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARK 229
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ +EM+ ++ D++ +N L+DAL K G V + M G KP+ ++ + YC
Sbjct: 230 VFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYC 289
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V+ + + M + ++ P+V++++ +I CK + VD+A LL
Sbjct: 290 DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H A + + +G P+ Y+ ++ + + + A +F EM+ + ++ YN
Sbjct: 188 HVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYN 247
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
L+ C G ++ + EM + PD +F + A G V A VL M +
Sbjct: 248 ALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRY 307
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
PNV T+N ++ C ++V+ + + M Q PD W+Y+ ++ C V+ A
Sbjct: 308 DLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRA 367
Query: 183 LNLL 186
LL
Sbjct: 368 TKLL 371
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ++ +++ +P+ + I + C V+ AY + M + P V T+
Sbjct: 257 GDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF 316
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I C +++ A LL+EM+ K NPD T+N+++ V A +L+ M +
Sbjct: 317 NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR 376
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIK 177
P+ TYN ++ + ++ +I+ M++ + P V +Y++MI+G + K
Sbjct: 377 TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKK 432
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L +++ PNV +N II +LCK++ V+DAY L EM+ K +P TY
Sbjct: 292 GDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTY 351
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+++ C ++ A LL+ M PD T+N ++ L + GR A + M +
Sbjct: 352 NSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSE 411
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDI---FNTMTQMEVTPDVWSYSIMIN---GFCK 175
P V TY ++ G LV++ K ++ F M + P + ++ N G+ +
Sbjct: 412 RKFYPTVATYTVMIHG--LVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQ 469
Query: 176 IKMVD 180
+ +VD
Sbjct: 470 MDVVD 474
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
R++ A P+VV YNT++ K +A LF ++ I P+++TYNTLI G C
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
G +E A L EM + I PDVIT+ TLV K G + A V M+++G KP+ Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 132 NSLMDGYCLVKEVNKTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ G + + +K + M + PD+ Y++ I+G CK+ + +A+ +
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQ-PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G + A +L ++ P++ +YN ID LCK + A ++ + P +
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TY T+I G+ GQ + A L +EM+ K + P VIT+ L+ +K GR+++A M
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
K G +PNV+T+N+L+ G C +++ M + + P+ +SY+++I+ C +
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671
Query: 180 DEALNLLK 187
+E + L K
Sbjct: 672 EEVVKLYK 679
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ A++ R+I P+ V Y T+I ++ A NL+ EM+ KR+ P+VIT
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI+G G++E A EM + + P+V+T N L+ + K G + EA L M
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
+EG PN +Y L+ C ++ + ++ M E+ PD +++ +
Sbjct: 648 EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P YN I +LC ++DA L S M +P V++YNTL+ G+ +G+ A L
Sbjct: 341 PTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+++ I+P ++T+NTL+D L + G ++ A+ + M + P+V+TY +L+ G+
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++ ++++ M + + PD ++Y+ G ++ D+A L
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 13/219 (5%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG A L ++ P++V YNT+ID LC+ + A L EM T+ I P VIT
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y TL+ GF G + A + +EM+ K I PD + T + G +A + M+
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 121 K-EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC---KI 176
+ P++ YN +DG C V + K + + ++ + PD +Y+ +I G+ +
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 177 KMV----DEALNLLKHP--ILYWML---YAKAIMLTGQF 206
KM DE L +P I Y++L +AKA L F
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 92/173 (53%), Gaps = 4/173 (2%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
+++ ++ + + V YN +I+ K+ + +A +M + T ++N LI G+C G
Sbjct: 263 EMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG 322
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
+ A + +EM+ I P T+N + AL GR+ +A+ +L+ M P+VV+YN
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYN 378
Query: 133 SLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+LM GY + + + +F+ + ++ P + +Y+ +I+G C+ ++ A L
Sbjct: 379 TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K P+V N ++ L +++N A ++ M+ I PTVIT+NT++ G +E
Sbjct: 197 KGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLER 256
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
+ EM ++I +T+N L++ SK G+++EA+ M + G ++N L++
Sbjct: 257 VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
GYC + + + M + P +Y+I I C +D+A LL
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P V+ +NT++DS K + ++ EM + I + +TYN LI GF G+ME A
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+M +FN L++ K+G +A V M+ G P TYN + C
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI-KMVDEAL 183
++ +++ ++M PDV SY+ +++G+ K+ K V+ +L
Sbjct: 356 FGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASL 395
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMV-TKRISPTVIT 60
G+ A ++ ++ K +P+ Y T + + A+ L EMV T +P +
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN I G C VG + A+ ++ + PD +T+ T++ + G+ K A+N+ M+
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++ P+V+TY L+ G+ + + M + V P+V +++ ++ G CK +D
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 181 EALNLL 186
EA L
Sbjct: 638 EAYRYL 643
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A Q +++ + +PNV+ +N ++ +CK +++AY +M + I P +Y
Sbjct: 599 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAK 113
LI C + E V L EM+ K I PD T L L K+ +E +
Sbjct: 659 TMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVE 710
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+M+ K P V N ++ L + +A V MI+ G P V+T+N+++D
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
++ + I+ M + + +Y+I+INGF K ++EA
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ A+++L ++ +P+ ++ ++D+LCK V DA LF +M R + + +L
Sbjct: 200 KKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM-RFPVNLRYFTSL 258
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
++G+C VG+M A +L +M PD++ + L+ + G++ +A ++L M + G
Sbjct: 259 LYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+PN Y L+ C V + + +F M + E DV +Y+ +++GFCK +D+
Sbjct: 319 EPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDK 375
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A LLR ++ + +PN Y +I +LCK + +A +F EM V+TY
Sbjct: 301 GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ GFC G+++ +L++M+ K + P +T+ ++ A K+ +E ++ M +
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P++ YN ++ C + EV + ++N M + ++P V ++ IMING + E
Sbjct: 421 IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLE 480
Query: 182 ALNLLKH 188
A + K
Sbjct: 481 ASDHFKE 487
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +L Q+ +P++V Y ++ + DAY+L +M + P
Sbjct: 265 VGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANC 324
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI C V +ME A+ + EM DV+T+ LV K G++ + VL MI
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K+G P+ +TY +M + + + ++ M Q+E PD+ Y+++I CK+ V
Sbjct: 385 KKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVK 444
Query: 181 EALNL 185
EA+ L
Sbjct: 445 EAVRL 449
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 39/202 (19%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT---YNTLIFGFCIVGQMEAAV 78
++ +Y +++ L K + + L EM ++ +P +I + L+ F ++ A+
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAI 203
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVK---------------------------- 110
+L+EM PD F L+DAL K G VK
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWC 263
Query: 111 ------EAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVW 164
EAK VL M + G +P++V Y +L+ GY ++ D+ M + P+
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 165 SYSIMINGFCKIKMVDEALNLL 186
Y+++I CK+ ++EA+ +
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVF 345
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 96/233 (41%), Gaps = 59/233 (25%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY----- 61
A+++ +++ + +VV Y ++ CK ++ Y + +M+ K + P+ +TY
Sbjct: 341 AMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV 400
Query: 62 ------------------------------NTLIFGFCIVGQMEAAVCLLNEMVLKSINP 91
N +I C +G+++ AV L NEM ++P
Sbjct: 401 AHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
Query: 92 DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
V TF +++ L+ +G + EA + M+ G +V Y +L L+ V K K
Sbjct: 461 GVDTFVIMINGLASQGCLLEASDHFKEMVTRG-LFSVSQYGTLK---LLLNTVLKDK--- 513
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWMLYAKAIMLTG 204
++E+ DVWS I G C++ +L W ++ A+ G
Sbjct: 514 ----KLEMAKDVWS-CITSKGACELN------------VLSWTIWIHALFSKG 549
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQ---PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
GH R A L +I G P+V ++N +++ + + + A L+ EM + PTV
Sbjct: 226 GHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTV 285
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
+TY TLI G+C + +++ A+ +L EM + + + + FN ++D L + GR+ EA ++
Sbjct: 286 VTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMER 345
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
P +VTYNSL+ +C ++ I M V P +Y+ F K
Sbjct: 346 FFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNK 405
Query: 179 VDEALNL 185
+E +NL
Sbjct: 406 TEEGMNL 412
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 94/177 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+++L +++ + N +++N IID L + +++A + PT++TYN+L+
Sbjct: 304 AMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVK 363
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC G + A +L M+ + ++P T+N SK + +E N+ +I+ G P
Sbjct: 364 NFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
+ +TY+ ++ C +++ + M + PD+ + +++I+ C+++M++EA
Sbjct: 424 DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAF 480
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL ++ + + P +V YN+++ + CK + A + M+T+ + PT TY
Sbjct: 334 GRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N F + E + L +++ +PD +T++ ++ L ++G++ A V M
Sbjct: 394 NHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P+++T L+ C ++ + + + F+ + + P ++ ++ NG M D
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDM 513
Query: 182 ALNL 185
A L
Sbjct: 514 AKRL 517
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 29 IIDSLCKDKLVNDAYNLFSEMVTKRIS----PTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
++D+LCK+ V +A +++ E + + P+V +N L+ G+ +++ A L EM
Sbjct: 218 LLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
++ P V+T+ TL++ + RV+ A VL M + N + +N ++DG +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ + E P + +Y+ ++ FCK + A +LK
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILK 379
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
L+L R I P+V+ Y+ +I +LCK +A LF+EMV+K + PTV TYN++I
Sbjct: 598 GLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMID 657
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+C G+++ + + M NPDVIT+ +L+ L GR EA M + P
Sbjct: 658 GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYP 717
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSY 166
N +T+ +L+ G C + F M + E+ PD Y
Sbjct: 718 NRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + L + G+ ++V ID L K++ V+ LF ++ P VI Y
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI C + A L NEMV K + P V T+N+++D KEG + + + M +
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ + P+V+TY SL+ G C ++ +N M + P+ ++ +I G CK E
Sbjct: 678 DEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGE 737
Query: 182 AL 183
AL
Sbjct: 738 AL 739
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL LL++++ +P + ++ LC++ DA ++ + ++ I
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G ++ + L ++ PDVI ++ L+ AL K R EA + M+ +G KP
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
V TYNS++DG+C E+++ M + E PDV +Y+ +I+G C EA+
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L ++ K +P V YN++ID CK+ ++ + M +P VITY +LI G C
Sbjct: 636 LFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G+ A+ NEM K P+ ITF L+ L K G EA M ++ +P+
Sbjct: 696 ASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSA 755
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
Y SL+ + + +N IF M P
Sbjct: 756 VYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ LL I P +MYN II+ +CK+ ++ L EM + P+ T N I+
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNC-IY 516
Query: 67 GFCIVGQME--AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
G C+ + + A+ LL +M P + LV L + GR +A L + EG
Sbjct: 517 G-CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF 575
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
++V + +DG + V++ ++F + PDV +Y ++I CK EA
Sbjct: 576 LGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEA 633
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+ ++ + + N Y +I K+ ++ A+ LF +M ++ + Y
Sbjct: 262 GQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALY 321
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI G C +E A+ L E+ I PD L+ + S+E E + V+I
Sbjct: 322 DVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEE---SELSRITEVIIG 378
Query: 122 EGEKPNV-VTYNSLMDGYC---LVKEV---------NKTKDIFNTMTQM------EVTPD 162
+ +K +V + Y SL +G+ LV E N D + + ++ + PD
Sbjct: 379 DIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPD 438
Query: 163 VWSYSIMINGFCKIKMVDEALNLLKHPIL 191
S SI+IN K VD A+ LL H I+
Sbjct: 439 SDSLSIVINCLVKANKVDMAVTLL-HDIV 466
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L + ++ P+V+ Y ++I LC ++A ++EM K P IT+
Sbjct: 663 GEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITF 722
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI G C G A+ EM K + PD + +LV + + + M+
Sbjct: 723 MALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVH 782
Query: 122 EGEKPNVVTYNSLM 135
+G P V N ++
Sbjct: 783 KGRFPVSVDRNYML 796
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 100/189 (52%), Gaps = 3/189 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK-DKLVNDAYNLFSEMVTKRISPTVIT 60
G R A+ + ++++ +P ++ YN I++ K N +L +M + I+P T
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 61 YNTLIFGFCIVGQM-EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
YNTLI C G + + A + EM + D +T+N L+D K R KEA VL M
Sbjct: 282 YNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+ G P++VTYNSL+ Y +++ ++ N M + PDV++Y+ +++GF + V
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 180 DEALNLLKH 188
+ A+++ +
Sbjct: 401 ESAMSIFEE 409
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 93/182 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A Q+ +++ + V YN ++D K +A + +EMV SP+++TYN+LI
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G ++ A+ L N+M K PDV T+ TL+ + G+V+ A ++ M G KP
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N+ T+N+ + Y + + IF+ + ++PD+ +++ ++ F + M E +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 187 KH 188
K
Sbjct: 478 KE 479
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 79/139 (56%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+L ++ + P++ YN+++ + + + E++ K I P +I+YNT+I+ +C
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+M A + +EM I PDVIT+NT + + + + +EA V+ MIK G +PN
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN 770
Query: 130 TYNSLMDGYCLVKEVNKTK 148
TYNS++DGYC + ++ K
Sbjct: 771 TYNSIVDGYCKLNRKDEAK 789
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 85/162 (52%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
L+ +++ P+ YNT+I + L +A +F EM S +TYN L+ +
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
+ + A+ +LNEMVL +P ++T+N+L+ A +++G + EA + M ++G KP+V
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
TY +L+ G+ +V IF M P++ +++ I
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 5 RP--ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
RP A+++L ++ P++V YN++I + +D ++++A L ++M K P V TY
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
TL+ GF G++E+A+ + EM P++ TFN + G+ E + +
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
G P++VT+N+L+ + ++ +F M + P+ +++ +I+ + + ++A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 183 LNLLKH 188
+ + +
Sbjct: 509 MTVYRR 514
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 91/176 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + +++ + P++ N+++ + ++V A + M + +P++ TYN+L++
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ +L E++ K I PD+I++NT++ A + R+++A + + M G P
Sbjct: 673 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+V+TYN+ + Y + + M + P+ +Y+ +++G+CK+ DEA
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 3 HTRPA-----LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPT 57
H+R A ++LR+I K +P+++ YNT+I + C++ + DA +FSEM I P
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 58 VITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAK 113
VITYNT I + E A+ ++ M+ P+ T+N++VD K R EAK
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 90/173 (52%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P V+ T++ K L+ +A FSE+ + SP + T N+++ + + A
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+L+ M + P + T+N+L+ S+ +++ +L ++ +G KP++++YN+++ YC
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILY 192
+ IF+ M + PDV +Y+ I + M +EA+ ++++ I +
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH 763
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
P++V +NT++ ++ + ++ +F EM P T+NTLI + G E A+
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ M+ + PD+ T+NT++ AL++ G ++++ VLA M KPN +TY SL+ Y
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 140 LVKEVN 145
KE+
Sbjct: 571 NGKEIG 576
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + R++ P++ YNT++ +L + + + + +EM R P +TY
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 62 NTLIFGFC---------------IVGQMEAAVCLLNEMVL-------------------- 86
+L+ + G +E LL +VL
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ +PD+ T N++V + V +A VL M + G P++ TYNSLM + + K
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCK-IKMVDEA 182
+++I + + PD+ SY+ +I +C+ +M D +
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + +++ +PN+ +N I + +F E+ +SP ++T+
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTL+ F G + EM P+ TFNTL+ A S+ G ++A V M+
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P++ TYN+++ +++ + M P+ +Y +++ + K +
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG- 576
Query: 182 ALNLLKHPILYWMLYAKAIML 202
++ L + ++ +A++L
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLL 597
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
G++ +A + N + + DV ++ +L+ A + GR +EA NV M ++G KP ++TY
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 132 NSLMDGYC-LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
N +++ + + NK + M + PD ++Y+ +I + + EA + +
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE 304
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ A+++L ++ +P+ ++ ++D+LCK+ V +A +F +M K P + + +L
Sbjct: 184 KKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSL 242
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
++G+C G++ A +L +M + PD++ F L+ + G++ +A +++ M K G
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 125 KPNVVTYNSLMDGYCLV-KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
+PNV Y L+ C K +++ +F M + D+ +Y+ +I+GFCK M+D+
Sbjct: 303 EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGY 362
Query: 184 NLL 186
++L
Sbjct: 363 SVL 365
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK-DKLVNDAYNLFSEMVTKRISPTVIT 60
G A L+ ++ + +PNV Y +I +LC+ +K +++A +F EM ++T
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVT 344
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI GFC G ++ +L++M K + P +T+ ++ A K+ + +E ++ M
Sbjct: 345 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G P+++ YN ++ C + EV + ++N M ++P V ++ IMINGF +
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLI 464
Query: 181 EALNLLKH 188
EA N K
Sbjct: 465 EACNHFKE 472
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L Q++ +P++V++ ++ + DAY+L ++M + P V Y
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCY 309
Query: 62 NTLIFGFCIV-GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
LI C +M+ A+ + EM D++T+ L+ K G + + +VL M
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K+G P+ VTY +M + ++ + ++ M + PD+ Y+++I CK+ V
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 181 EALNL 185
EA+ L
Sbjct: 430 EAVRL 434
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A ++ ++ K PN+ + +++ C++ + +A + +M + P ++ +
Sbjct: 216 GSVKEASKVFEDMREKFP-PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVF 274
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSK-EGRVKEAKNVLAVMI 120
L+ G+ G+M A L+N+M + P+V + L+ AL + E R+ EA V M
Sbjct: 275 TNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME 334
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G + ++VTY +L+ G+C ++K + + M + V P +Y ++ K + +
Sbjct: 335 RYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFE 394
Query: 181 EALNLLK-------HPIL 191
E L L++ HP L
Sbjct: 395 ECLELIEKMKRRGCHPDL 412
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 33 LCKDKLVNDAYNLFSEMVTKRISPTVIT---YNTLIFGFCIVGQMEAAVCLLNEMVLKSI 89
L K + + L EM ++ +P +I + L+ F ++ AV +L+EM +
Sbjct: 141 LSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 90 NPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKD 149
PD F L+DAL K G VKEA V M +E PN+ + SL+ G+C ++ + K+
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 150 IFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ M + + PD+ ++ +++G+ + +A +L+
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G +L ++ K P+ V Y I+ + K + + L +M + P ++ Y
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I C +G+++ AV L NEM ++P V TF +++ + +G + EA N M+
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVS 475
Query: 122 EG--EKPNVVTYNSLMDGYCLVKEVNKTKDIF----NTMTQMEVTPDVWS 165
G P T SL++ ++ KD++ N + E+ W+
Sbjct: 476 RGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWT 525
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+L+ +++ + P++++YN +I CK V +A L++EM +SP V T+ +I G
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456
Query: 68 FCIVGQMEAAVCLLNEMVLKSI--NPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE- 124
F G + A EMV + I P T +L++ L ++ +++ AK+V + + +
Sbjct: 457 FTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSS 516
Query: 125 -KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+ NV + + V + M +M++ P +Y+ ++ G K+
Sbjct: 517 CELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKL 569
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGK-SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
GH A++L + Q V +YN+++ +LC K+ + AY L M+ K + P T
Sbjct: 160 GHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRT 219
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y L+ G+C G+M+ A L+EM + NP + L++ L G ++ AK +++ M
Sbjct: 220 YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMT 279
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K G P++ T+N L++ EV +++ T ++ + D+ +Y +I KI +D
Sbjct: 280 KGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKID 339
Query: 181 EALNLL 186
EA LL
Sbjct: 340 EAFRLL 345
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 35/199 (17%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L+R++ K +P+ Y +++ C + +A EM + +P + LI
Sbjct: 201 AYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIE 260
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFN----------------------------- 97
G G +E+A ++++M PD+ TFN
Sbjct: 261 GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV 320
Query: 98 ------TLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
TL+ A+SK G++ EA +L +++G KP Y ++ G C + F
Sbjct: 321 DIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFF 380
Query: 152 NTMTQMEVTPDVWSYSIMI 170
+ M P+ Y+++I
Sbjct: 381 SDMKVKAHPPNRPVYTMLI 399
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H L L+ +++ +P+ +++N II++ + ++ A +F +M PT T+N
Sbjct: 369 HFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 428
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TLI G+ +G++E + LL+ M+ + P+ T N LV A + +++EA N++ M
Sbjct: 429 TLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKD-IFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G KP+VVT+N+L Y + +D I M +V P+V + ++NG+C+ ++
Sbjct: 489 YGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKME 548
Query: 181 EALNLLK-------HPILY 192
EAL HP L+
Sbjct: 549 EALRFFYRMKELGVHPNLF 567
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 89/168 (52%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+PNV TI++ C++ + +A F M + P + +N+LI GF + M+
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+++ M + PDV+TF+TL++A S G +K + + M++ G P++ ++ L GY
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYA 647
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
E K + I N M + V P+V Y+ +I+G+C + +A+ + K
Sbjct: 648 RAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYK 695
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+ +++ PN+ ++N++I ++ + M + P V+T+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+TL+ + VG M+ + +M+ I+PD+ F+ L ++ G ++A+ +L M K
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM-EVTPDVWSYSIMINGFCKIKMVD 180
G +PNVV Y ++ G+C E+ K ++ M + ++P++ +Y +I GF + K
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW 724
Query: 181 EALNLLK 187
+A LLK
Sbjct: 725 KAEELLK 731
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLF-SEMVTKRISPTVITYNTLI 65
A ++ ++Q +P+VV +NT+ + + A ++ M+ ++ P V T T++
Sbjct: 479 AWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIV 538
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
G+C G+ME A+ M ++P++ FN+L+ + V+ +M + G K
Sbjct: 539 NGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVK 598
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
P+VVT+++LM+ + V ++ + ++I+ M + + PD+ ++SI+ G+ + ++A +
Sbjct: 599 PDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Query: 186 LKH 188
L
Sbjct: 659 LNQ 661
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Query: 16 GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME 75
G + +V +++ L + +A+++F+ ++ + P++ITY TL+
Sbjct: 312 GGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFH 371
Query: 76 AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
+ + L++++ + PD I FN +++A S+ G + +A + M + G KP T+N+L+
Sbjct: 372 SLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLI 431
Query: 136 DGYCLVKEVNKTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKMVDEALNLL 186
GY + ++ ++ + + M + E + P+ + +I++ +C + ++EA N++
Sbjct: 432 KGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIV 483
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+VV ++T++++ + ++++M+ I P + ++ L G+ G+ E A
Sbjct: 598 KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQ 657
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK-EGEKPNVVTYNSLMDGY 138
+LN+M + P+V+ + ++ G +K+A V M G PN+ TY +L+ G+
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
K+ K +++ M V P + ++ +G+ I
Sbjct: 718 GEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSI 755
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVT-KRISPTVIT 60
G A Q+L Q++ +PNVV+Y II C + A ++ +M +SP + T
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTT 709
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEG 107
Y TLI+GF Q A LL +M K++ P T + D G
Sbjct: 710 YETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 52/96 (54%)
Query: 92 DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
DV + L++ L + GR +EA ++ +I+EG KP+++TY +L+ K + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 152 NTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + + + PD ++ +IN + +D+A+ + +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFE 413
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 2 GHTR-----PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
GH R A ++ +++ N V Y +I L + K +++A +L +M P
Sbjct: 199 GHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCP 258
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
V TY LI C GQ A+ L +M I PD + L+ + + EA +L
Sbjct: 259 NVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
M++ G PNV+TYN+L+ G+C K V+K + + M + + PD+ +Y+ +I G C
Sbjct: 319 EHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSS 377
Query: 177 KMVDEALNLL 186
+D A LL
Sbjct: 378 GNLDSAYRLL 387
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 1/186 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ A Q + + P+ Y + I C+ K V+ A+ +F EM ++
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS 227
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI+G +++ A+ LL +M + P+V T+ L+DAL G+ EA N+ M
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G KP+ Y L+ +C +++ + M + + P+V +Y+ +I GFCK K V
Sbjct: 288 ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVH 346
Query: 181 EALNLL 186
+A+ LL
Sbjct: 347 KAMGLL 352
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
P++ +NT+++ CK V +A + ++ P TY + I G C +++AA
Sbjct: 152 SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFK 211
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ EM + + +++ L+ L + ++ EA ++L M + PNV TY L+D C
Sbjct: 212 VFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC 271
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ ++ ++F M++ + PD Y+++I FC +DEA LL+H
Sbjct: 272 GSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL LL +++ + PNV Y +ID+LC ++A NLF +M I P Y LI
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC ++ A LL M+ + P+VIT+N L+ K+ V +A +L+ M+++ P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVP 362
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+++TYN+L+ G C ++ + + M + + P+
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L +Q+ +P+ MY +I S C +++A L M+ + P VITY
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI GFC + A+ LL++M+ +++ PD+IT+NTL+ G + A +L++M +
Sbjct: 334 NALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEE 392
Query: 122 EGEKPNVVT 130
G PN T
Sbjct: 393 SGLVPNQRT 401
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++L + G++ + + ++ +I SLC+ + V DA L +M++K +P +N ++
Sbjct: 356 AQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVH 415
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G ++ A +L M + + PDV T+ ++ +K G + EA+ +LA K+ +K
Sbjct: 416 ACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKL 475
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ VTY++L+ GYC ++E ++ + N M + V P+ Y+ +I FC +AL+
Sbjct: 476 SPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL-----KALDWE 530
Query: 187 KHPILYWMLYAKAIML 202
K +L+ + K + L
Sbjct: 531 KAEVLFEEMKQKGLHL 546
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 45/240 (18%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G ++ A + + + PN Y +++LCK ++ A ++ +M+ +
Sbjct: 244 LGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQ 303
Query: 61 YNTLIFGFCIVGQMEAAVCL--LNEMVLKSINP--------------DVITF-NTLVDAL 103
+I FC G+ E A + L + KS+ P ITF ++ L
Sbjct: 304 MGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDL 363
Query: 104 SKEGR-------------------VKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
S E R VK+AK +L MI +G P +N ++ ++
Sbjct: 364 SGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDL 423
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL-----KH----PILYWML 195
++ K++ M + PDV++Y+++I+G+ K M+DEA +L KH P+ Y L
Sbjct: 424 DEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHAL 483
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 72/120 (60%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V + +ID++C K + +A L S++ P YNT++ GFC + + AV
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ +M + + PD IT+NTL+ LSK GRV+EA+ L M+ G +P+ TY SLM+G C
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+ V + + SLC+ V++A +L E+ K P TYN L+ C +
Sbjct: 156 EPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYE 215
Query: 80 LLNEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
++EM + PD+++F L+D + ++EA +++ + G KP+ YN++M G+
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
C + + ++ ++ M + V PD +Y+ +I G K V+EA LK
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVIT 60
G A L++++ K + P+ YN ++ LCK K ++ Y EM + P +++
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ LI C + A+ L++++ PD +NT++ + EA V M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+EG +P+ +TYN+L+ G V + + TM PD +Y+ ++NG C+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R A+ L+ ++ +P+ +YNTI+ C ++A ++ +M + + P ITYNTL
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEG 107
IFG G++E A L MV PD T+ +L++ + ++G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 39 VNDAYNLFSEMV-TKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS---INPDVI 94
++DA +LF+ + T RI + +N+++ + + + V L + +LKS P
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLF-QHILKSQPNFRPGRS 123
Query: 95 TFNTLVDALSK--EGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFN 152
TF L+ + + + VL +M+ G +P+ VT + + C V++ KD+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 153 TMTQMEVTPDVWSYSIMINGFCKIK 177
+T+ PD ++Y+ ++ CK K
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCK 208
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAY-NLFSEMVTKRISPTVIT 60
G +L+LL +++ + P+++ YNT+I++ + L + LF+EM + I P ++T
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVT 249
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNTL+ I G + A + M I PD+ T++ LV+ K R+++ ++L M
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G P++ +YN L++ Y + + +F+ M TP+ +YS+++N F + D
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 181 EALNLL 186
+ L
Sbjct: 370 DVRQLF 375
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 108/187 (57%), Gaps = 2/187 (1%)
Query: 2 GHTRPALQLLRQIQGK-SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G + +L+L + +Q + +PN +Y +I L ++ L++ +F EM ++ +S +V +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEA-KNVLAVM 119
Y LI + G+ E ++ LL+ M + I+P ++T+NT+++A ++ G E + A M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
EG +P++VTYN+L+ + ++ + +F TM + PD+ +YS ++ F K++ +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 180 DEALNLL 186
++ +LL
Sbjct: 299 EKVCDLL 305
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L L +++ + QP++V YNT++ + L ++A +F M I P + TY+ L+
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
F + ++E LL EM PD+ ++N L++A +K G +KEA V M G PN
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
TY+ L++ + + + +F M PD +Y+I+I F + E + L
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A+ + Q+Q PN Y+ +++ + +D LF EM + P TY
Sbjct: 331 GSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATY 390
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI F G + V L ++MV ++I PD+ T+ ++ A K G ++A+ +L M
Sbjct: 391 NILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+ Y +++ + + FNTM ++ P + ++ ++ F + +V E
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 182 ALNLLKH 188
+ +L
Sbjct: 511 SEAILSR 517
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
LL ++ + P++ YN ++++ K + +A +F +M +P TY+ L+ F
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G+ + L EM + +PD T+N L++ + G KE + M++E +P++
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
TY ++ + I MT ++ P +Y+ +I F + + +EAL
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + + L + ++ +P++ Y II + K L DA + M I P+ Y
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I F E A+ N M NP + TF++L+ + ++ G VKE++ +L+ ++
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVT---PDVWSYSIMINGFCKIKM 178
G N T+N+ ++ Y K+ K ++ T ME + PD + +++ + ++
Sbjct: 521 SGIPRNRDTFNAQIEAY---KQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 179 VDE 181
VDE
Sbjct: 578 VDE 580
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 89/187 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L+ + P+ Y +I++ + L +A F+ M +P++ T+
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++L++ F G ++ + +L+ +V I + TFN ++A + G+ +EA M K
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+ T +++ Y + V++ ++ F M ++ P + Y +M+ + K + D+
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 615
Query: 182 ALNLLKH 188
LL+
Sbjct: 616 VNELLEE 622
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVI 59
+G A ++ ++ ++ + + +N ++++ K + +F E+ K I P V
Sbjct: 119 VGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVA 178
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+YNTLI G C G AV L++E+ K + PD ITFN L+ +G+ +E + + A M
Sbjct: 179 SYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM 238
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+++ K ++ +YN+ + G + + + +F+ + E+ PDV++++ MI GF +
Sbjct: 239 VEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKL 298
Query: 180 DEALNLLKH 188
DEA+ K
Sbjct: 299 DEAITWYKE 307
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 10 LLRQIQGK-SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+ +++ GK S +P+V YNT+I LC +A L E+ K + P IT+N L+
Sbjct: 163 IFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHES 222
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G+ E + MV K++ D+ ++N + L+ E + +E ++ + KP+V
Sbjct: 223 YTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDV 282
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
T+ +++ G+ ++++ + + + P + ++ ++ CK ++ A L K
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE 342
Query: 189 PILYWMLYAKAIM 201
+L +A++
Sbjct: 343 IFAKRLLVDEAVL 355
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTII-DSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G A+ L+ +I+ K +P+ + +N ++ +S K K + +++ MV K + + +
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF-EEGEQIWARMVEKNVKRDIRS 249
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN + G + + E V L +++ + PDV TF ++ EG++ EA +
Sbjct: 250 YNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIE 309
Query: 121 KEGEKPNVVTYNSLMDGYC 139
K G +P +NSL+ C
Sbjct: 310 KNGCRPLKFVFNSLLPAIC 328
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 104/185 (56%), Gaps = 1/185 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A +LL +++ + PNVV YN ++ C+ K ++ A +FS ++ K + P TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI G + A+ ++N M +I + + + T+++ L K G+ +A+ +LA MI+
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 122 EGEK-PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
E + ++YNS++DG+ E++ + M ++P+V +Y+ ++NG CK +D
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 181 EALNL 185
+AL +
Sbjct: 637 QALEM 641
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 98/189 (51%), Gaps = 11/189 (5%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ ++ G PNV+ Y ++++ LCK+ ++ A + EM K + + Y
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI GFC ME+A L +E++ + +NP +N+L+ G + A ++ M+K
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVN--KTKDIFNTMTQMEVTPDVWSYSIMINGFCK---- 175
+G + ++ TY +L+DG L+K+ N +++ M + + PD Y++++NG K
Sbjct: 718 DGLRCDLGTYTTLIDG--LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 176 ---IKMVDE 181
+KM +E
Sbjct: 776 VKVVKMFEE 784
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 95/179 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL++ +++ K + ++ Y +ID CK + A LFSE++ + ++P+ YN+LI
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF +G M AA+ L +M+ + D+ T+ TL+D L K+G + A + M G P
Sbjct: 698 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVP 757
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ + Y +++G + K +F M + VTP+V Y+ +I G + +DEA L
Sbjct: 758 DEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Query: 1 MGHTRPALQLLRQ-IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+G T A +LL I+ K + + YN+IID K+ ++ A + EM ISP VI
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TY +L+ G C +M+ A+ + +EM K + D+ + L+D K ++ A + + +
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
++EG P+ YNSL+ G+ + + D++ M + + D+ +Y+ +I+G K
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 34/221 (15%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A++L ++ NVV ++I CK+ + A LF +M + SP +T+
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA------------------- 102
+ LI F G+ME A+ +M + + P V +T++
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 103 ---------------LSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
L K+G+ EA +L+ M G PNVV+YN++M G+C K ++
Sbjct: 438 TGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 148 KDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ +F+ + + + P+ ++YSI+I+G + AL ++ H
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 41/229 (17%)
Query: 2 GHTR-----PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
GH + AL L +++ + PN V ++ +I+ K+ + A + +M ++P
Sbjct: 348 GHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTP 407
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+V +T+I G+ + E A+ L +E + +V NT++ L K+G+ EA +L
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELL 466
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI------ 170
+ M G PNVV+YN++M G+C K ++ + +F+ + + + P+ ++YSI+I
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 171 -----------------------------NGFCKIKMVDEALNLLKHPI 190
NG CK+ +A LL + I
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS-PTVITYNTLI 65
AL++L + + A+P+ ++Y+ + + CK + A +L EM K++ P+ TY ++I
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
G M+ A+ L +EM+ I+ +V+ +L+ K + A + M KEG
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
PN VT++ L++ + E+ K + + M + +TP V+ +I G+ K + +EAL L
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 186 L 186
Sbjct: 432 F 432
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ AL L +++ + ++ Y T+ID L KD + A L++EM + P I
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y ++ G GQ V + EM ++ P+V+ +N ++ +EG + EA + M+
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 121 KEGEKPNVVTYNSLMDG 137
+G P+ T++ L+ G
Sbjct: 822 DKGILPDGATFDILVSG 838
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 41 DAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSIN-PDVITFNTL 99
+A + S + + P + Y+ + C + A LL EM K + P T+ ++
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 100 VDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
+ A K+G + +A + M+ +G NVV SL+ G+C ++ +F+ M +
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLLK 187
+P+ ++S++I F K +++AL K
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYK 398
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 100/187 (53%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + ++++ ++++ + + YN++ + + A F++MV++ + PT TY
Sbjct: 199 GIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTY 258
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +++GF + ++E A+ +M + I+PD TFNT+++ + ++ EA+ + M
Sbjct: 259 NLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG 318
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+VV+Y +++ GY V V+ IF M + P+ +YS ++ G C + E
Sbjct: 319 NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVE 378
Query: 182 ALNLLKH 188
A N+LK+
Sbjct: 379 AKNILKN 385
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P YN ++ + A F +M T+ ISP T+NT+I GFC +M+ A
Sbjct: 252 EPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEK 311
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L EM I P V+++ T++ RV + + M G +PN TY++L+ G C
Sbjct: 312 LFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLC 371
Query: 140 LVKEVNKTKDIFNTMTQMEVTP 161
++ + K+I M + P
Sbjct: 372 DAGKMVEAKNILKNMMAKHIAP 393
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 83/164 (50%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
M+ +I+S K +V ++ +F +M + T+ +YN+L G+ A N+M
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
V + + P T+N ++ R++ A M G P+ T+N++++G+C K++
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
++ + +F M ++ P V SY+ MI G+ + VD+ L + +
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G +LQ + ++ K PN Y+ ++++ K++ ++A L E++ K P +++
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS 248
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN L+ GFC G+ + A+ L E+ K +V+++N L+ L +GR +EA ++LA M
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMT----QMEVTPDVWSYSIMINGFCKI 176
P+VVTYN L++ + + M+ Q VT SY+ +I CK
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVT--ATSYNPVIARLCKE 366
Query: 177 KMVD 180
VD
Sbjct: 367 GKVD 370
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A+QL+ +++ N V YN ++ LC +N + ++ K ++P TY
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTY 214
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ L+ + AV LL+E+++K P+++++N L+ KEGR +A + +
Sbjct: 215 SFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G K NVV+YN L+ C + + M + P V +Y+I+IN ++
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 182 ALNLLKH 188
AL +LK
Sbjct: 335 ALQVLKE 341
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ Y +++ LCK V A L +M +TYN L+ G C++G + ++
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+ ++ K + P+ T++ L++A KE EA +L +I +G +PN+V+YN L+ G+C
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +F + +V SY+I++ C +EA +LL
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
I G S +P++ + D + ++D+++ +VT P V L++ C +
Sbjct: 62 ITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANR 121
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
++ A+ ++ MV I PD + LV+ L K G V A ++ M G N VTYN+
Sbjct: 122 LKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYW 193
L+ G C++ +N++ + Q + P+ ++YS ++ K + DEA+ LL I+
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 194 M---LYAKAIMLTG 204
L + ++LTG
Sbjct: 242 GEPNLVSYNVLLTG 255
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVM--YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
G T ALQ+L+++ + Q V YN +I LCK+ V+ EM+ +R P
Sbjct: 330 GRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEG 389
Query: 60 TYN-----------------------------------TLIFGFCIVGQMEAAVCLLNEM 84
TYN ++I C G AA LL EM
Sbjct: 390 TYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEM 449
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK-EGEKPNVVTYNSLMDGYCLVKE 143
+PD T++ L+ L EG A VL++M + E KP V +N+++ G C ++
Sbjct: 450 TRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRR 509
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFC---KIKMVDEALNLLK 187
+ ++F M + + P+ +Y+I++ G ++++ E L+ L+
Sbjct: 510 TDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 73/259 (28%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A+ L R++ K + NVV YN ++ LC D +A +L +EM +P+V+TY
Sbjct: 260 GRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTY 319
Query: 62 NTLIFGFCIVGQMEAA-------------------------------------VCLLNEM 84
N LI G+ E A V L+EM
Sbjct: 320 NILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEA-------------------KNVLAVMIKEGE- 124
+ + P+ T+N + +V+EA K+V+ + ++G
Sbjct: 380 IYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNT 439
Query: 125 ---------------KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME-VTPDVWSYSI 168
P+ TY++L+ G CL ++ + M + E P V +++
Sbjct: 440 FAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNA 499
Query: 169 MINGFCKIKMVDEALNLLK 187
MI G CKI+ D A+ + +
Sbjct: 500 MILGLCKIRRTDLAMEVFE 518
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Query: 9 QLLRQIQGK-SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+L ++ GK S +P++V YNT+I +LC+ + +A L E+ K + P ++T+NTL+
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+ GQ E + +MV K++ D+ T+N + L+ E + KE N+ + G KP+
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
V ++N+++ G ++++ + + + + PD ++++++ CK + A+ L K
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 188 H 188
Sbjct: 345 E 345
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Query: 29 IIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLK- 87
II K + +A +F EM + +V+++N L+ + + + + L NE+ K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 88 SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
SI PD++++NTL+ AL ++ + EA +L + +G KP++VT+N+L+ L +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 148 KDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++I+ M + V D+ +Y+ + G E +NL
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLF 273
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ LL +I+ K +P++V +NT++ S ++++MV K ++ + TYN +
Sbjct: 199 AVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLL 258
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + V L E+ + PDV +FN ++ EG++ EA+ ++K G +P
Sbjct: 259 GLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRP 318
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIF 151
+ T+ L+ C + ++F
Sbjct: 319 DKATFALLLPAMCKAGDFESAIELF 343
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 2 GHTR-----PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
G+TR A + R+++ +P+V YN++I K+ ++N LF EM+ +SP
Sbjct: 57 GYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSP 116
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMV-LKSINPDVITFNTLVDALSKEGRVKEAKNV 115
+ +YNTL+ + +G+ A +L+E + L + P + T+N L+DAL K G A +
Sbjct: 117 DMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL 176
Query: 116 LAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+K KP ++TYN L++G C + V + + + TP+ +Y+ M+ + K
Sbjct: 177 FK-HLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFK 235
Query: 176 IKMVDEALNLL 186
K +++ L L
Sbjct: 236 TKRIEKGLQLF 246
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+V+ YNT+I + +++AY + M I P V TYN+LI G + + L
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK-EGEKPNVVTYNSLMDGYC 139
+EM+ ++PD+ ++NTL+ K GR EA +L I G P + TYN L+D C
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+ ++F + + V P++ +Y+I+ING CK + V
Sbjct: 166 KSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRV 204
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GHT A++L + ++ + +P ++ YN +I+ LCK + V + E+ +P +TY
Sbjct: 168 GHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T++ + ++E + L +M + D +V AL K GR +EA + +++
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 122 EGEKP-NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
G + ++V+YN+L++ Y ++ D+ + + PD ++++I++NG I
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNI 342
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+ N ++SLCK + + A L + + + P VITYNTLI G+ ++ A + M
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
I PDV T+N+L+ +K + + M+ G P++ +YN+LM Y +
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 145 NKTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ I + + + P + +Y+I+++ CK D A+ L KH
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH 179
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%)
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N + C +E A LL + + + PDVIT+NTL+ ++ + EA V M +
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P+V TYNSL+ G +N+ +F+ M ++PD+WSY+ +++ + K+ E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 182 ALNLLKHPI 190
A +L I
Sbjct: 137 AFKILHEDI 145
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 5/170 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMV-TKRISPTVITYNTLI 65
LQL +++ + + ++ +L K +AY E+V + S +++YNTL+
Sbjct: 242 GLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
+ G ++A LL E+ +K + PD T +V+ L G A+ LA + + G +
Sbjct: 302 NLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQ 361
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
P+VVT N L+DG C V++ +F MEV D ++Y+ +++ CK
Sbjct: 362 PSVVTCNCLIDGLCKAGHVDRAMRLF---ASMEVR-DEFTYTSVVHNLCK 407
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 90.9 bits (224), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL ++ QPN V YN +I S + +N+A N+F++M P +TY TLI
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G ++ A+ + M ++PD T++ +++ L K G + A + M+ +G PN+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
VTYN +MD + + ++ M PD +YSI++ ++EA
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH A +L ++ + PN+V YN ++D K + +A L+ +M P +TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 62 NTL--IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+ + + G C G +E A + EM K+ PD + LVD K G V++A M
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN-------- 171
+ G +PNV T NSL+ + V ++ + ++ M + + P + +Y+++++
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Query: 172 ---GFCKIKMVDEA----LNLLKHP 189
GFC M + LLK P
Sbjct: 661 LDMGFCGQLMASTGHPAHMFLLKMP 685
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ + Q+Q +P+ V Y T+ID K ++ A +++ M +SP TY+ +I
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + AA L EMV + P+++T+N ++D +K + A + M G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 127 NVVTYNSLMD--GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ VTY+ +M+ G+C E + + +F M Q PD Y ++++ + K V++A
Sbjct: 538 DKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y T++ +L + K L EMV P +TYN LI + + A+ + N+M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK--E 143
PD +T+ TL+D +K G + A ++ M G P+ TY+ +++ CL K
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN--CLGKAGH 484
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ +F M TP++ +Y+IM++ K + AL L +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TY T++ Q A LL+EMV P+ +T+N L+ + + + EA NV M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK---- 175
+ G KP+ VTY +L+D + ++ D++ M ++PD ++YS++IN K
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 176 -------IKMVDEAL--NLLKHPILYWMLYAKA 199
+MVD+ NL+ + I+ L+AKA
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMM-DLHAKA 517
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 90.9 bits (224), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL ++ QPN V YN +I S + +N+A N+F++M P +TY TLI
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G ++ A+ + M ++PD T++ +++ L K G + A + M+ +G PN+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
VTYN +MD + + ++ M PD +YSI++ ++EA
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH A +L ++ + PN+V YN ++D K + +A L+ +M P +TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 62 NTL--IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+ + + G C G +E A + EM K+ PD + LVD K G V++A M
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN-------- 171
+ G +PNV T NSL+ + V ++ + ++ M + + P + +Y+++++
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Query: 172 ---GFCKIKMVDEA----LNLLKHP 189
GFC M + LLK P
Sbjct: 661 LDMGFCGQLMASTGHPAHMFLLKMP 685
Score = 76.6 bits (187), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ + Q+Q +P+ V Y T+ID K ++ A +++ M +SP TY+ +I
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + AA L EMV + P+++T+N ++D +K + A + M G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 127 NVVTYNSLMD--GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ VTY+ +M+ G+C E + + +F M Q PD Y ++++ + K V++A
Sbjct: 538 DKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y T++ +L + K L EMV P +TYN LI + + A+ + N+M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK--E 143
PD +T+ TL+D +K G + A ++ M G P+ TY+ +++ CL K
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN--CLGKAGH 484
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ +F M TP++ +Y+IM++ K + AL L +
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TY T++ Q A LL+EMV P+ +T+N L+ + + + EA NV M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK---- 175
+ G KP+ VTY +L+D + ++ D++ M ++PD ++YS++IN K
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 176 -------IKMVDEAL--NLLKHPILYWMLYAKA 199
+MVD+ NL+ + I+ L+AKA
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMM-DLHAKA 517
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQ--PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
+G + AL L ++ K A+ P+VV + +I+ + + +F MV + + P +
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
++YN L+ + + G A+ +L ++ I PDV+++ L+++ + + +AK V +
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWS 165
M KE KPNVVTYN+L+D Y + + +IF M Q + P+V S
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + AL +L I+ P+VV Y +++S + + A +F M +R P V+TY
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI + G + AV + +M I P+V++ TL+ A S+ + VL+
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N YNS + Y E+ K ++ +M + +V D +++I+I+G C++ E
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 182 ALNLLKH 188
A++ LK
Sbjct: 417 AISYLKE 423
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS--PTVITYNTL 64
AL ++G +P+ +N II L K + A +LF+ M KR P V+T+ ++
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ + + G++E + MV + + P+++++N L+ A + G A +VL + + G
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
P+VV+Y L++ Y ++ K K++F M + P+V +Y+ +I+ + + EA+
Sbjct: 255 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 314
Query: 185 LLKH 188
+ +
Sbjct: 315 IFRQ 318
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+YN +I + V+ A LF EM P TY+ LI GQ A+ L+++M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
+ +I P T+N L++A G +EA V M G P++VT+N ++ Y ++
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+K F M +V PD +++I+I K+ +AL+L
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A+ L+ + + P+ YN +I++ +A + +M + P ++T+
Sbjct: 60 GQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH 119
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI- 120
N ++ + Q A+ M + PD TFN ++ LSK G+ +A ++ M
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 121 KEGE-KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
K E +P+VVT+ S+M Y + E+ + +F M + P++ SY+ ++ + M
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 180 DEALNLL 186
AL++L
Sbjct: 240 GTALSVL 246
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+L Q + N YN+ I S + A L+ M K++ +T+ LI G C
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+ + A+ L EM SI +++++ A SK+G+V EA+++ M G +P+V+
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 469
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
Y S++ Y ++ K ++F M + PD + S ++ F K
Sbjct: 470 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++Q S +P+ Y+ +I++ + A NL +M+ I+P+ TYN LI
Sbjct: 30 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 89
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G A+ + +M + PD++T N ++ A + +A + +M +P
Sbjct: 90 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 149
Query: 127 NVVTYNSLMDGYCLVK--EVNKTKDIFNTMTQ--MEVTPDVWSYSIMIN 171
+ T+N ++ YCL K + ++ D+FN+M + E PDV +++ +++
Sbjct: 150 DTTTFNIII--YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 78/172 (45%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+++ RQ++ +PNVV T++ + + K + + S ++ I+ Y
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+ I + ++E A+ L M K + D +TF L+ + + EA + L M
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
Y+S++ Y +V + + IFN M PDV +Y+ M++ +
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 62/132 (46%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L + ++ K + + V + +I C+ +A + EM I T Y++++
Sbjct: 382 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 441
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ GQ+ A + N+M + PDVI + +++ A + + +A + M G +P
Sbjct: 442 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 501
Query: 127 NVVTYNSLMDGY 138
+ + ++LM +
Sbjct: 502 DSIACSALMRAF 513
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQ--PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
+G + AL L ++ K A+ P+VV + +I+ + + +F MV + + P +
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
++YN L+ + + G A+ +L ++ I PDV+++ L+++ + + +AK V +
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
M KE KPNVVTYN+L+D Y + + +IF M Q + P+V
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + AL +L I+ P+VV Y +++S + + A +F M +R P V+TY
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI + G + AV + +M I P+V++ TL+ A S+ + VL+
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N YNS + Y E+ K ++ +M + +V D +++I+I+G C++ E
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 182 ALNLLKH 188
A++ LK
Sbjct: 549 AISYLKE 555
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS--PTVITYNTL 64
AL ++G +P+ +N II L K + A +LF+ M KR P V+T+ ++
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ + + G++E + MV + + P+++++N L+ A + G A +VL + + G
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
P+VV+Y L++ Y ++ K K++F M + P+V +Y+ +I+ + + EA+
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 185 LLKH 188
+ +
Sbjct: 447 IFRQ 450
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%)
Query: 25 MYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEM 84
+YN +I + V+ A LF EM P TY+ LI GQ A+ L+++M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 85 VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
+ +I P T+N L++A G +EA V M G P++VT+N ++ Y ++
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+K F M +V PD +++I+I K+ +AL+L
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 306
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A+ L+ + + P+ YN +I++ +A + +M + P ++T+
Sbjct: 192 GQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH 251
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI- 120
N ++ + Q A+ M + PD TFN ++ LSK G+ +A ++ M
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 121 KEGE-KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
K E +P+VVT+ S+M Y + E+ + +F M + P++ SY+ ++ + M
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 180 DEALNLL 186
AL++L
Sbjct: 372 GTALSVL 378
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+L Q + N YN+ I S + A L+ M K++ +T+ LI G C
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
+ + A+ L EM SI +++++ A SK+G+V EA+++ M G +P+V+
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 601
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
Y S++ Y ++ K ++F M + PD + S ++ F K
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L ++Q S +P+ Y+ +I++ + A NL +M+ I+P+ TYN LI
Sbjct: 162 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 221
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G A+ + +M + PD++T N ++ A + +A + +M +P
Sbjct: 222 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 281
Query: 127 NVVTYNSLMDGYCLVK--EVNKTKDIFNTMTQ--MEVTPDVWSYSIMIN 171
+ T+N ++ YCL K + ++ D+FN+M + E PDV +++ +++
Sbjct: 282 DTTTFNIII--YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 62/132 (46%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ L + ++ K + + V + +I C+ +A + EM I T Y++++
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 573
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ GQ+ A + N+M + PDVI + +++ A + + +A + M G +P
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 633
Query: 127 NVVTYNSLMDGY 138
+ + ++LM +
Sbjct: 634 DSIACSALMRAF 645
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 1/171 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L +++ K P+ V YN+++ + +++ ++ +M +TY
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMV-LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
NT+I + GQ++ A+ L +M L NPD IT+ L+D+L K R EA +++ M+
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
G KP + TY++L+ GY + + +D F+ M + PD +YS+M++
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++LL ++ +P+ + YNT++ + +D ++ A +F +M R P + TYN +I
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G A L E+ LK PD +T+N+L+ A ++E ++ K V M K G
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKMVDEALNL 185
+ +TYN+++ Y +++ ++ M + PD +Y+++I+ K EA L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 186 LKH 188
+
Sbjct: 461 MSE 463
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLV--NDAYNLFSEMVTKRISPTVI 59
G A +L+ ++ + P+++ +NT+I++ K + N A L + + P I
Sbjct: 239 GKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAI 298
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TYNTL+ ++ AV + +M PD+ T+N ++ + G EA+ + +
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+G P+ VTYNSL+ + + K K+++ M +M D +Y+ +I+ + K +
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 180 DEALNLLK 187
D AL L K
Sbjct: 419 DLALQLYK 426
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQ-PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G ALQL + ++G S + P+ + Y +IDSL K +A L SEM+ I PT+ T
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+ LI G+ G+ E A + M+ PD + ++ ++D L + ++A + MI
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMI 535
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
+G P+ Y ++ G L+KE N++ DI T+ ME
Sbjct: 536 SDGHTPSYTLYELMILG--LMKE-NRSDDIQKTIRDME 570
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM--VTKRISPTVIT 60
+T ++ +Q+Q + + YNTII K ++ A L+ +M ++ R +P IT
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR-NPDAIT 440
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI + A L++EM+ I P + T++ L+ +K G+ +EA++ + M+
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G KP+ + Y+ ++D E K ++ M TP Y +MI G K D
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
Query: 181 E 181
+
Sbjct: 561 D 561
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 11/172 (6%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV----ITYNTLIFGFCIVGQMEA 76
PN M I+ L + + A +F+ R PTV YN ++ + G+
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFT-----RAEPTVGDRVQVYNAMMGVYSRSGKFSK 243
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKE--AKNVLAVMIKEGEKPNVVTYNSL 134
A L++ M + PD+I+FNTL++A K G + A +L ++ G +P+ +TYN+L
Sbjct: 244 AQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 135 MDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ +F M PD+W+Y+ MI+ + + + EA L
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ +Q+ ++I+ +P+ YNT+I C+D+ + Y L +M + P + TY +L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I F +E A L E++ K + D ++T++ G +A+ +L +M G
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
+P + T + LM Y + + + + + EV YS +I+ + + K + +
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 185 LL 186
L
Sbjct: 1124 RL 1125
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 1 MGHTRPALQLLRQIQGK----SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
+G A Q++ Q + K + P MY II++ K KL A ++ + +P
Sbjct: 729 LGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTP 785
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+ T+N+L+ + G E A + N M+ +P V + N L+ AL +GR++E V+
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVV 845
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+ G K + + ++D + + + K I+++M P + Y +MI CK
Sbjct: 846 EELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 905
Query: 177 KMVDEA 182
K V +A
Sbjct: 906 KRVRDA 911
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 24 VMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
MY T++ ++ +A +FS++ + +++ +C +G E A ++N+
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQ 741
Query: 84 MVLKSINPDVIT-FNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK 142
K + + +++A K+ ++A++V+ + + G P++ T+NSLM Y
Sbjct: 742 AETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
Query: 143 EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
+ + IFNTM + +P V S +I+++ C
Sbjct: 802 CYERARAIFNTMMRDGPSPTVESINILLHALC 833
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P + +Y +I+ LCK K V DA + SEM + +N+++ + + + V +
Sbjct: 890 PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+ + PD T+NTL+ ++ R +E ++ M G P + TY SL+ +
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGK 1009
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
K + + + +F + + D Y M+
Sbjct: 1010 QKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL ++ QPN V YN +I S + +N+A N+F++M P +TY TLI
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G ++ A+ + M ++PD T++ +++ L K G + A + M+ +G PN+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
VTYN +MD + + ++ M PD +YSI++ ++EA
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH A +L ++ + PN+V YN ++D K + +A L+ +M P +TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 62 NTL--IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+ + + G C G +E A + EM K+ PD + LVD K G V++A M
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN-------- 171
+ G +PNV T NSL+ + V ++ + ++ M + + P + +Y+++++
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Query: 172 ---GFCKIKMVDEALNLLKHPILYWMLYAKAIMLTGQ 205
GFC M HP ++L A G+
Sbjct: 661 LDMGFCGQLMASTG-----HPAHMFLLKMPAAGPDGE 692
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ + Q+Q +P+ V Y T+ID K ++ A +++ M +SP TY+ +I
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + AA L EMV + P+++T+N ++D +K + A + M G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 127 NVVTYNSLMD--GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ VTY+ +M+ G+C E + + +F M Q PD Y ++++ + K V++A
Sbjct: 538 DKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y T++ +L + K L EMV P +TYN LI + + A+ + N+M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
PD +T+ TL+D +K G + A ++ M G P+ TY+ +++ +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+F M TP++ +Y+IM++ K + AL L +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%)
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TY T++ Q A LL+EMV P+ +T+N L+ + + + EA NV M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+ G KP+ VTY +L+D + ++ D++ M ++PD ++YS++IN K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 180 DEALNLL 186
A L
Sbjct: 486 PAAHKLF 492
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 97/175 (55%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P++V YNT+I +LC+ ++D ++F E+ P +I++NTL+ F +
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+ M K+++P++ ++N+ V L++ + +A N++ VM EG P+V TYN+L+ Y +
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWML 195
+ + +N M + +TPD +Y ++I CK +D A+ + + I + +L
Sbjct: 311 DNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
++ K+ PN+ YN+ + L ++K DA NL M T+ ISP V TYN LI + +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG--EKPNV 128
+E + NEM K + PD +T+ L+ L K+G + A V IK +PN+
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM 370
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 90/181 (49%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L + +++ +P+++ +NT+++ + +L + ++ M +K +SP + +YN+ + G
Sbjct: 213 LSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+ A+ L++ M + I+PDV T+N L+ A + ++E M ++G P+
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
VTY L+ C ++++ ++ + ++ Y ++ +DEA L+K
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Query: 188 H 188
+
Sbjct: 393 N 393
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 35/203 (17%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME---- 75
+P YN I++SL K ++ +M+ SP V+TYN L++ +G+M+
Sbjct: 216 RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 76 -------------------------------AAVCLLNEMVLKSINPDVITFNTLVDALS 104
AA+ LN M I+P V+ + TL+D LS
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 105 KEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVW 164
+ G ++ K L M+K G +P+VV Y ++ GY + E++K K++F MT P+V+
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 165 SYSIMINGFCKIKMVDEALNLLK 187
+Y+ MI G C EA LLK
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLK 418
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+L ++ P+ YN ++ L K A + M I P+V+ Y TLI G
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G +EA L+EMV PDV+ + ++ G + +AK + M +G+ PNV
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
TYNS++ G C+ E + + M P+ YS +++ K + EA +++
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIR 453
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ L ++ +P+VV Y +I ++ A +F EM K P V TY
Sbjct: 338 GNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY 397
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N++I G C+ G+ A LL EM + NP+ + ++TLV L K G++ EA+ V+ M+K
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Query: 122 EGEKPNVV 129
+G ++V
Sbjct: 458 KGHYVHLV 465
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
+N +I S + L A F + T P +YN ++ V Q + + +M+
Sbjct: 187 FNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML 246
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+PDV+T+N L+ + G++ + M ++G P+ TYN L+ ++ + N
Sbjct: 247 EDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLH---ILGKGN 303
Query: 146 KTKDIFNTMTQME---VTPDVWSYSIMINGFCK 175
K T+ M+ + P V Y+ +I+G +
Sbjct: 304 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%)
Query: 43 YNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA 102
+ L EMV T T+N LI G + AV + + P ++N ++++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 103 LSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
L + K + V M+++G P+V+TYN L+ + ++++ +F+ M + +PD
Sbjct: 229 LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPD 288
Query: 163 VWSYSIMINGFCKIKMVDEALNLLKH 188
++Y+I+++ K AL L H
Sbjct: 289 SYTYNILLHILGKGNKPLAALTTLNH 314
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 89.0 bits (219), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 97/183 (53%), Gaps = 5/183 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R L+L+ + +G +YN + LC + N+ M+ P T
Sbjct: 394 GKARNVLELMLRKEGAD---RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTL 450
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVL-KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
NT+I G C +G+++ A+ +L++M+ K PD +T NT++ L +GR +EA +VL ++
Sbjct: 451 NTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 121 KEGE-KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
E + KP VV YN+++ G + + ++ +F + + VT D +Y+I+I+G C V
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 180 DEA 182
D A
Sbjct: 571 DMA 573
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 12/181 (6%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y +IDSLC+ + + A + M +K + P +YN +I G C G A LL E
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
P T+ L+++L KE +A+NVL +M+++ YN + G C++
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWMLYAKAIMLTGQ 205
+ ++ +M Q + PD ++ + +ING CK+ VD+A+ +L M+TG+
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDD------------MMTGK 477
Query: 206 F 206
F
Sbjct: 478 F 478
Score = 80.5 bits (197), Expect = 7e-16, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVT-KRISPTVITYNTLIFGF 68
L+ +QG +P+ NT+I+ LCK V+DA + +M+T K +P +T NT++ G
Sbjct: 435 LVSMLQG-DCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGL 493
Query: 69 CIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
G+ E A+ +LN ++ ++ I P V+ +N ++ L K + EA +V + K +
Sbjct: 494 LAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
TY ++DG C+ +V+ K ++ + D + Y+ + G C+ + +A + L
Sbjct: 554 STTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL 612
Score = 70.5 bits (171), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL++L + + +P+ + +++I SLC ++A+ F + P T N +I
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 67 GFCIVGQMEAAVCLLNEMV--LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ + +++ ++ K P + +N L++ L RV +A ++ M G
Sbjct: 134 RLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH 193
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
P+VVT+ +L+ GYC ++E+ +F+ M + P+ + S++I GF K++ V+
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 185 LLK 187
L+K
Sbjct: 254 LMK 256
Score = 70.5 bits (171), Expect = 7e-13, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 37/217 (17%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSE------------------ 48
A +++ ++ K +P YN II LCKD AY L E
Sbjct: 326 AARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLME 385
Query: 49 -----------------MVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINP 91
M+ K + YN + G C++ + +L M+ P
Sbjct: 386 SLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRP 445
Query: 92 DVITFNTLVDALSKEGRVKEAKNVL-AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDI 150
D T NT+++ L K GRV +A VL +M + P+ VT N++M G + D+
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Query: 151 FN-TMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N M + ++ P V +Y+ +I G K+ DEA+++
Sbjct: 506 LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVF 542
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 2 GHTRPALQLLRQIQGKSA-QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G AL +L ++ ++ +P VV YN +I L K ++A ++F ++ ++ T
Sbjct: 497 GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTT 556
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y +I G C+ +++ A ++++ S D + + L + G + +A + L +
Sbjct: 557 YAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLA 616
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
G PNVV YN+++ + I M + PD ++ I+
Sbjct: 617 DSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 40/221 (18%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L+ ++ + P+VV + T+I C+ + + A+ +F EM I P +T + LI
Sbjct: 181 AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG 240
Query: 67 GFCIVGQMEAAVCLLNEM--VLKS---INPDVITFNTLVDALSKEG-------------- 107
GF + +E L+ E+ +K+ + F LVD++ +EG
Sbjct: 241 GFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSL 300
Query: 108 ---------------------RVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
R A ++ +M +G KP +YN+++ G C +
Sbjct: 301 CESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMR 360
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ ++ E P ++Y +++ CK +A N+L+
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLE 401
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ALQLL Q +II +L +A LF E+ I P Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ G+ G ++ A +++EM + ++PD T++ L+DA GR + A+ VL M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+PN ++ L+ G+ E KT + M + V PD Y+++I+ F K +D
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 182 AL 183
A+
Sbjct: 463 AM 464
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 91/186 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + Q+L++++ +P+ YN +ID+ K ++ A F M+++ I P +T+
Sbjct: 423 GEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTW 482
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI C G+ A + M + P T+N ++++ + R + K +L M
Sbjct: 483 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G PNVVT+ +L+D Y N + M + + P Y+ +IN + + + ++
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 602
Query: 182 ALNLLK 187
A+N +
Sbjct: 603 AVNAFR 608
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL +++ + PNVV + T++D K NDA EM + + P+ YN LI +
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G E AV M + P ++ N+L++A ++ R EA VL M + G KP+V
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIK 177
VTY +LM V + K ++ M PD + S++ + +K
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMK 703
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T A L +++ +P YN ++ K + DA ++ SEM + +SP TY
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI + G+ E+A +L EM + P+ F+ L+ G ++ VL M
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
G KP+ YN ++D + ++ F+ M + PD +++ +I+ CK
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 84/170 (49%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++ ++ + P YN +I+S + +D L +M ++ I P V+T+ TL+
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G+ A+ L EM + P +N L++A ++ G ++A N VM +G KP
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+++ NSL++ + + + + M + V PDV +Y+ ++ ++
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDA--YNLFSEMVTKRISPTVITYNTL 64
AL L+ +++ Q + V Y+ +I SL + ++ L+ E+ ++ V N +
Sbjct: 216 ALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDI 275
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I GF G A+ LL ++ T +++ AL+ GR EA+ + + + G
Sbjct: 276 IMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGI 335
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
KP YN+L+ GY + + + + M + V+PD +YS++I+ + + A
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 395
Query: 185 LLKH 188
+LK
Sbjct: 396 VLKE 399
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++ L +++ +P+ MYN +I++ + L A N F M + + P+++
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI F + A +L M + PDV+T+ TL+ AL + + ++ V MI
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682
Query: 122 EGEKPN 127
G KP+
Sbjct: 683 SGCKPD 688
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+L ++I+ + +V + N II K + A L +S T ++I
Sbjct: 254 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
G+ A L E+ I P +N L+ K G +K+A+++++ M K G P+
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
TY+ L+D Y + + M +V P+ + +S ++ GF
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF 419
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 94/167 (56%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V++N+++ ++ + + A + + +SP ++TYN+L+ + G+ A
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+L + + PD++++NT++ + G ++EA +L+ M + G +P + TYN+ + GY
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + +D+ M + + P+ ++ ++++G+C+ EA++ +
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L I+ P++V YN+++D + A + + ++ P +++YNT+I
Sbjct: 650 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GFC G M+ AV +L+EM + I P + T+NT V + G E ++V+ M K +P
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDI 150
N +T+ ++DGYC + ++ D
Sbjct: 770 NELTFKMVVDGYCRAGKYSEAMDF 793
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 97/187 (51%), Gaps = 1/187 (0%)
Query: 1 MGHT-RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
MG + R L +L +++ K + + +T++ + ++ L+ +A F+E+ + P +
Sbjct: 258 MGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTV 317
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TYN L+ F G A+ +L EM S D +T+N LV A + G KEA V+ +M
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
K+G PN +TY +++D Y + ++ +F +M + P+ +Y+ +++ K
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 180 DEALNLL 186
+E + +L
Sbjct: 438 NEMIKML 444
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 7/186 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A + +++ +P V YN ++ K + +A ++ EM +TY
Sbjct: 295 GLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N L+ + G + A ++ M K + P+ IT+ T++DA K G+ EA + M +
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME---VTPDVWSYSIMINGFCKIKM 178
G PN TYN+++ L+ + +++ ++ + M+ +P+ +++ M+ C K
Sbjct: 415 AGCVPNTCTYNAVLS---LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKG 470
Query: 179 VDEALN 184
+D+ +N
Sbjct: 471 MDKFVN 476
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++L+ ++ +P++V YNT+I C+ L+ +A + SEM + I P + TY
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLA 117
NT + G+ +G ++ M P+ +TF +VD + G+ EA + ++
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVS 795
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +LL +I + +V Y TI+ + + A +LF M SPT++TYN ++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 67 GFCIVGQM-EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
F +G+ + +L+EM K + D T +T++ A ++EG ++EAK A + G +
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
P VTYN+L+ + + + M + D +Y+ ++ + + EA +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 186 LKHPILYWMLYAKAIM 201
++ M+ K +M
Sbjct: 374 IE------MMTKKGVM 383
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 2/175 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+L ++ PN YN ++ L K N+ + +M + SP T+
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 62 NTLIFGFCIVGQMEAAV-CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
NT++ C M+ V + EM PD TFNTL+ A + G +A + M
Sbjct: 460 NTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMT 518
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+ G V TYN+L++ + +++ + M P SYS+M+ + K
Sbjct: 519 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 77/140 (55%), Gaps = 3/140 (2%)
Query: 42 AYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD 101
A+ LF + K P ++ +N+++ F + A +L + ++PD++T+N+L+D
Sbjct: 618 AFTLFKKHGYK---PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 102 ALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
+ G +A+ +L + K KP++V+YN+++ G+C + + + + MT+ + P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 162 DVWSYSIMINGFCKIKMVDE 181
+++Y+ ++G+ + M E
Sbjct: 735 CIFTYNTFVSGYTAMGMFAE 754
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 97/250 (38%), Gaps = 70/250 (28%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
++ R+++ +P+ +NT+I + + DA ++ EM + V TYN L+
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEG----------RVKE------- 111
G + ++++M K P +++ ++ +K G R+KE
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 112 ------------------AKNVLAVMIKEGEKPNV------------------------- 128
++ + K G KP++
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 129 ----------VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
VTYNSLMD Y E K ++I T+ + ++ PD+ SY+ +I GFC+ +
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 179 VDEALNLLKH 188
+ EA+ +L
Sbjct: 717 MQEAVRMLSE 726
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 39/204 (19%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
QP + +N ++D+LCK LV + L M R+ P T+N L FG+C V + A+
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK-------------- 125
LL EM+ P+ T+ +D + G V EA ++ MI +G
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 126 ------------------------PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
P+V TY +++G C+ ++V++ + M+ P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 162 DVWSYSIMINGFCKIKMVDEALNL 185
D+ +Y+ + C+ + DEAL L
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKL 433
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS---PTVITY 61
+ A++LL ++ +P Y ID+ C+ +V++A +LF M+TK + PT T+
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I + E L+ M+ PDV T+ +++ + +V EA L M
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P++VTYN + C ++ ++ ++ M + P V +Y+++I+ F ++ D
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 182 ALN 184
A N
Sbjct: 465 AFN 467
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVT--KRISPTVITYNTL---IFGFCIVG 72
S +P + YN +ID L K N + + +M+ KR + TV+ + L + +C
Sbjct: 156 SHEP--IAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERY 213
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
+ + P++ FN L+DAL K G VKE + +L M + KP+ T+N
Sbjct: 214 LTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFN 272
Query: 133 SLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
L G+C V++ K + M + P+ ++Y I+ FC+ MVDEA +L
Sbjct: 273 VLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLF 326
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + L ++ K P++V YN + LC+++ ++A L+ MV R +P+V TYN LI
Sbjct: 395 AYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
F + + A EM + DV T+ +++ L R KEA +L ++ +G K
Sbjct: 455 MFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL 514
Query: 127 NVVTYNSLM 135
++S +
Sbjct: 515 PYRVFDSFL 523
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 41/183 (22%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+L+ ++ P+V Y +I+ +C + V++AY EM K P ++TYN +
Sbjct: 361 FELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRV 420
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C + + A+ L MV P V T+N L+ M E + P
Sbjct: 421 LCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS-----------------MFFEMDDP- 462
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQM---EVTPDVWSYSIMINGFCKIKMVDEALN 184
DG FNT T+M + DV +Y MING EA
Sbjct: 463 --------DG------------AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 185 LLK 187
LL+
Sbjct: 503 LLE 505
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK--RISPTVI 59
G + AL +++ +P+V YNTII++LC+ A L +M R P
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 60 TYNTLIFGFCIVG-----------QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR 108
TY LI +C G +M A + EM+ + PDV+T+N L+D K R
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 109 VKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM-EVTPDVWSYS 167
+ A + M +G PN VTYNS + Y + E+ ++ TM ++ P +Y+
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYT 358
Query: 168 IMINGFCKIKMVDEALNLL 186
+I+ + + EA +L+
Sbjct: 359 PLIHALVETRRAAEARDLV 377
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 16/194 (8%)
Query: 10 LLRQIQGKSAQPNVVMYNTI---IDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
LRQ+ + NVV +I + L ++ V +A F M P V YNT+I
Sbjct: 149 FLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIIN 208
Query: 67 GFCIVGQMEAAVCLLNEMVLKSIN--PDVITFNTLVDALSKEG-----------RVKEAK 113
C VG + A LL++M L PD T+ L+ + + G R+ EA
Sbjct: 209 ALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEAN 268
Query: 114 NVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
+ M+ G P+VVTYN L+DG C + + ++F M P+ +Y+ I +
Sbjct: 269 RMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328
Query: 174 CKIKMVDEALNLLK 187
++ A+ +++
Sbjct: 329 SVTNEIEGAIEMMR 342
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++ R++ + P+VV YN +ID CK + A LF +M TK P +TYN+ I
Sbjct: 267 ANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIR 326
Query: 67 GFCIVGQMEAAVCLLNEM-VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
+ + ++E A+ ++ M L P T+ L+ AL + R EA++++ M++ G
Sbjct: 327 YYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLV 386
Query: 126 PNVVTYNSLMDG 137
P TY + D
Sbjct: 387 PREYTYKLVCDA 398
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + A +L + + PN YN ++ + C + ++ AY LF +M+ + + P V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI GFC GQ+ A+ LL++M+ K PD TL+ L +G E K L MI
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVT--PDVW 164
+G P+ N L+ G+C +V + D+ + + T D W
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTW 329
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
+N I D L K + + Y L E + TY LI + E + +M+
Sbjct: 100 FNLIDDVLAKHR--SSGYPLTGE---------IFTY--LIKVYAEAKLPEKVLSTFYKML 146
Query: 86 LKSINPDVITFNTLVDAL-SKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEV 144
+ P N ++D L S G +++A + G PN +YN LM +CL ++
Sbjct: 147 EFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL 206
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +F M + +V PDV SY I+I GFC+ V+ A+ LL
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 86.7 bits (213), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVND-AYNLFSEMVTKRISPTVITYNTLIFGF 68
LLR+++ +PNV Y +I + + K ++D A + F M + P+ +Y LI +
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY 495
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
+ G E A EM + I P V T+ +++DA + G + + +M++E K
Sbjct: 496 SVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR 555
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK-------IKMVDE 181
+TYN+L+DG+ + +D+ + ++M + P V +Y++++N + + +++ E
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Query: 182 --ALNLLKHPILY-WMLYA 197
ALNL I Y M+YA
Sbjct: 616 MAALNLKPDSITYSTMIYA 634
Score = 77.0 bits (188), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Query: 21 PNVVMYNTIIDSLCK-DKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
P+ V +I +L K + + + +F +M K + + + L+ FC G E A+
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ EM K I + I +NTL+DA +K ++E + + M +G KP+ TYN LMD Y
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ + + + M + + P+V SY+ +I+ + + K + +
Sbjct: 426 RRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
Score = 74.7 bits (182), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL + +++ K + N ++YNT++D+ K + + LF+EM K + P+ TY
Sbjct: 358 GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATY 417
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKE-AKNVLAVMI 120
N L+ + Q + LL EM + P+V ++ L+ A + ++ + A + M
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
K G KP+ +Y +L+ Y + K F M + + P V +Y+ +++ F
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
++ ++ K + + ++ ++ S C + L +A + +EM K I I YNTL+ +
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
+E L EM K + P T+N L+DA ++ + + +L M G +PNV
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 129 VTYNSLMDGYCLVKEV-NKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
+Y L+ Y K++ + D F M ++ + P SY+ +I+ +
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY 495
Score = 63.9 bits (154), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 1 MGHTRPA---LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPT 57
+G R A L LL + K +V +YN I L + +DA+ ++ M + P
Sbjct: 248 LGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPD 307
Query: 58 VITYNTLIFGFCIVGQMEAAVC-LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+T LI G+ V + +M K + F LV + EG +EA +
Sbjct: 308 NVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQ 367
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
M K+G + N + YN+LMD Y + + + +F M + P +Y+I+++ + +
Sbjct: 368 TEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARR 427
Query: 177 KMVDEALNLLK 187
D LL+
Sbjct: 428 MQPDIVETLLR 438
Score = 63.9 bits (154), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L L +I+G + YNT++D K L +A ++ SE + P+V+TYN L+
Sbjct: 545 LMLREKIKGTR-----ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNA 599
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+ GQ LL EM ++ PD IT++T++ A + K A +M+K G+ P+
Sbjct: 600 YARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Query: 128 VVTYNSLMDGYCLVKEVNKTKD 149
+Y L ++++ KTK+
Sbjct: 660 PRSYEKLR---AILEDKAKTKN 678
Score = 63.5 bits (153), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 74/147 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+V Y +++D+ + ++ M+ ++I T ITYNTL+ GF G A
Sbjct: 517 KPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARD 576
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+++E + P V+T+N L++A ++ G+ + +L M KP+ +TY++++ +
Sbjct: 577 VVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFV 636
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSY 166
V++ + M + PD SY
Sbjct: 637 RVRDFKRAFFYHKMMVKSGQVPDPRSY 663
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
N ++DSL + KL +A LF ++ +R +P ++TY L+ G+C V + A + N+M+
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ + PD++ N +++ L + + +A + VM +G PNV +Y ++ +C +
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK------HP 189
+ F+ M + PD Y+ +I GF K +D LLK HP
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 8/207 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++L ++ K PNV Y +I CK + A F +MV + P Y LI
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF +++ LL EM K PD T+N L+ ++ + + A + MI+ +P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ T+N +M Y + + + ++ M + + PD SY+++I G EA L
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 531
Query: 187 --------KHPILYWMLYAKAIMLTGQ 205
K P++ + +A GQ
Sbjct: 532 EEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V +N +++ L + + +DA LF M +K P V +Y +I FC ME A+
Sbjct: 330 KPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
++MV + PD + L+ + ++ +L M ++G P+ TYN+L+
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
K I+N M Q E+ P + ++++++ +
Sbjct: 450 NQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
YN+++ L K + ++ EM TK + T+ T+ + F + + AV + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
V T N L+D+L + KEA+ VL +KE PN++TY L++G+C V+ +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ I+N M + PD+ ++++M+ G + + +A+ L
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 90/165 (54%), Gaps = 13/165 (7%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
YN II LCK ++A N+F+ ++ + P V TYN +I F +G+ E L EM+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFSSLGRAEK---LYAEMI 72
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ + PD IT+N+++ L K+ ++ +A+ V + T+N+L++GYC V
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVK 123
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
++F M + + +V +Y+ +I+GF ++ + AL++ + +
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
QP+V YN +I + + A L++EM+ + + P ITYN++I G C ++ A
Sbjct: 46 QPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA-- 99
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ ++ TFNTL++ K RVK+ N+ M + G NV+TY +L+ G+
Sbjct: 100 -------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFR 152
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V + N DIF M V ++ ++ C K + +A+ +L
Sbjct: 153 QVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 45 LFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALS 104
+F M + YN +I G C G+ + A + +++ + PDV T+N ++ S
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFS 59
Query: 105 KEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVW 164
GR A+ + A MI+ G P+ +TYNS++ G C ++ + + +V+
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR---------KVSKSCS 107
Query: 165 SYSIMINGFCKIKMVDEALNLL 186
+++ +ING+CK V + +NL
Sbjct: 108 TFNTLINGYCKATRVKDGMNLF 129
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 15 QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQM 74
Q + + +NT+I+ CK V D NLF EM + I VITY TLI GF VG
Sbjct: 98 QARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDF 157
Query: 75 EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
A+ + EMV + ITF ++ L KE + +A+++ +K ++V+ N
Sbjct: 158 NTALDIFQEMVSNGVYSSSITFRDILPQLCSR---KELRKAVAMLL---QKSSMVSNN 209
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL L ++ P+V+ Y T+ID ++ A +F EM K P V TYN++I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G C+ G+ A LL EM + NP+ + ++TLV L K G++ EA+ V+ M+K+G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYV 827
Query: 127 NVVT 130
++V+
Sbjct: 828 HLVS 831
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%)
Query: 76 AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
AA+ LN M I+P V+ + TL+D G + +AK + M +G+ PNV TYNS++
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 136 DGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
G C+ E + + M P+ YS ++ K + EA ++K
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIK 818
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 54 ISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAK 113
I P+V+ Y TLI G+ + G+++ A + EM +K P+V T+N+++ L G +EA
Sbjct: 720 IDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC 779
Query: 114 NVLAVMIKEGEKPNVVTYNSLMDGY 138
+L M G PN V Y++L+ GY
Sbjct: 780 WLLKEMESRGCNPNFVVYSTLV-GY 803
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVITYNTLI 65
A Q+L ++ N + YN ++ CK ++ A +L EM I P V++YN +I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE- 124
G ++ A+ NEM + I P I++ TL+ A + G+ K A V M+ +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
K +++ +N L++GYC + + + + + M + P+V +Y + NG + + +AL
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 185 LLKH 188
L K
Sbjct: 651 LWKE 654
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 94/180 (52%), Gaps = 8/180 (4%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+ +R+ +++ P+ V Y T++ + L++ A + +EM + ITYN L+ G
Sbjct: 437 LEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKG 496
Query: 68 FCIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAV---MIKEG 123
+C Q++ A LL EM + I PDV+++N ++D + ++ LA M G
Sbjct: 497 YCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL---IDDSAGALAFFNEMRTRG 553
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNT-MTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
P ++Y +LM + + + +F+ M V D+ ++++++ G+C++ ++++A
Sbjct: 554 IAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDA 613
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 49 MVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL---KSINPDVITFNTLVDALSK 105
++ K +P Y TL+ G+ G++ +L M ++ +PD +T+ T+V A
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 106 EGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ-MEVTPDVW 164
G + A+ VLA M + G N +TYN L+ GYC ++++ +D+ MT+ + PDV
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 165 SYSIMING 172
SY+I+I+G
Sbjct: 525 SYNIIIDG 532
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK---PNVVTYNSLMDGYCL 140
++ K PD + TL+ K GRV + +L M ++ ++ P+ VTY +++ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+++ + + M +M V + +Y++++ G+CK +D A +LL+
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE 512
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
R I GK PNV +YNT+++ K ++ A + M +R P V T+N LI G+C
Sbjct: 185 RLIDGK---PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRS 241
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
+ + A+ L EM K P+V++FNTL+ G+++E + MI+ G + + T
Sbjct: 242 SKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATC 301
Query: 132 NSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
L+DG C V+ + + V P + Y ++ C A+ +++
Sbjct: 302 EILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMME 357
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 35/204 (17%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTII-----------------------------------D 31
AL L R+++ K +PNVV +NT+I D
Sbjct: 247 ALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 32 SLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINP 91
LC++ V+DA L +++ KR+ P+ Y +L+ C + A+ ++ E+ K P
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 92 DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF 151
I TLV+ L K GR ++A + M+ G P+ VT+N L+ C +
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR 426
Query: 152 NTMTQMEVTPDVWSYSIMINGFCK 175
+ PD +Y ++++GF K
Sbjct: 427 LLASSKGYEPDETTYHVLVSGFTK 450
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 92/186 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+ +++ + A+P+V +N +I+ C+ + A +LF EM K P V+++
Sbjct: 207 GDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSF 266
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI GF G++E V + EM+ T LVD L +EGRV +A ++ ++
Sbjct: 267 NTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLN 326
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ P+ Y SL++ C + + ++ + + TP + + ++ G K ++
Sbjct: 327 KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEK 386
Query: 182 ALNLLK 187
A ++
Sbjct: 387 ASGFME 392
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L+ + K P+ Y ++++ LC + A + E+ K +P I
Sbjct: 312 GRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIAC 371
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TL+ G G+ E A + +M+ I PD +TFN L+ L +A + +
Sbjct: 372 TTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASS 431
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF-CKIKMVD 180
+G +P+ TY+ L+ G+ + + + N M ++ PD+++Y+ +++G C K
Sbjct: 432 KGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Query: 181 EALNLL 186
+ + +L
Sbjct: 492 KQVRML 497
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 6/188 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + A++ RQI K ++V +NT++ +DK + A + M+ + +S I++
Sbjct: 410 GYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISF 469
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TLI G+ G++E A+ + + M+ + +++ +N++V+ LSK G A+ V+ M
Sbjct: 470 GTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM-- 527
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM--EVTPDVWSYSIMINGFCKIKMV 179
E ++VTYN+L++ V + DI + M + E + + +++IMIN CK
Sbjct: 528 --EIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSY 585
Query: 180 DEALNLLK 187
++A +LK
Sbjct: 586 EKAKEVLK 593
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEM---VTKRISPTVITYNTLIFGFCIVGQMEAA 77
PNVV +N +ID CK + A L +M +SP +TYN++I GFC G+++ A
Sbjct: 251 PNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLA 310
Query: 78 VCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
+ +MV ++ + T+ LVDA + G EA + M +G N V YNS++
Sbjct: 311 ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYW 370
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ ++ + M + D ++ +I++ G C+ V EA+ +
Sbjct: 371 LFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQ 421
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NV +N +I S CK+ + +A ++F M+ + P V+++N +I G C G M A+ LL
Sbjct: 217 NVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL 276
Query: 82 NEMVLKS---INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+M + S ++P+ +T+N++++ K GR+ A+ + M+K G N TY +L+D Y
Sbjct: 277 GKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAY 336
Query: 139 CLVKEVNKTKDIFNTMTQ 156
++ + + MT
Sbjct: 337 GRAGSSDEALRLCDEMTS 354
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A +++ Q + + +V N + L ++ + ++ EM + V T+
Sbjct: 162 GDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTF 221
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM-I 120
N +I+ FC ++ A+ + M+ + P+V++FN ++D K G ++ A +L M +
Sbjct: 222 NLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGM 281
Query: 121 KEGE--KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
G PN VTYNS+++G+C ++ + I M + V + +Y +++ + +
Sbjct: 282 MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGS 341
Query: 179 VDEALNL--------------LKHPILYWML 195
DEAL L + + I+YW+
Sbjct: 342 SDEALRLCDEMTSKGLVVNTVIYNSIVYWLF 372
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 92/181 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + AL+L ++ K N V+YN+I+ L + + A ++ +M +K + T
Sbjct: 340 GSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQ 399
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ G C G ++ AV ++ K + D++ NTL+ ++ ++ A +L M+
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV 459
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G + +++ +L+DGY ++ + +I++ M +M T ++ Y+ ++NG K M
Sbjct: 460 QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGA 519
Query: 182 A 182
A
Sbjct: 520 A 520
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 38/222 (17%)
Query: 2 GHTRPALQLLRQI---QGKSAQPNVVMYNTIIDSLCKDKLVN------------------ 40
G R ALQLL ++ G PN V YN++I+ CK ++
Sbjct: 267 GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNE 326
Query: 41 -------DAYN----------LFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
DAY L EM +K + + YN++++ + G +E A+ +L +
Sbjct: 327 RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRD 386
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
M K++ D T +V L + G VKEA + ++ ++V +N+LM + K+
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKK 446
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ I +M ++ D S+ +I+G+ K ++ AL +
Sbjct: 447 LACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEI 488
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
L+R Q + P+V +++++ + ++ AY + + + +V N +
Sbjct: 137 LIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLL 194
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
V +++ + EM +V TFN ++ + KE ++ EA +V M+K G PNVV
Sbjct: 195 NVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVV 254
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQME---VTPDVWSYSIMINGFCKIKMVDEA 182
++N ++DG C ++ + M M V+P+ +Y+ +INGFCK +D A
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLA 310
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL++ + + N+V+YN+I++ L K + A + + M K I +TY
Sbjct: 480 GKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTY 535
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDV--ITFNTLVDALSKEGRVKEAKNVLAVM 119
NTL+ G +E A +L++M + V +TFN +++ L K G ++AK VL M
Sbjct: 536 NTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFM 595
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
++ G P+ +TY +L+ + + K ++ + + VTP
Sbjct: 596 VERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK--RISPTVITYNTLIFGFCIVGQMEAAVC 79
++V YNT+++ K V +A ++ S+M + S +++T+N +I C G E A
Sbjct: 531 DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKE 590
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
+L MV + + PD IT+ TL+ + SK ++ + +I +G P+ Y S++
Sbjct: 591 VLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
N ++DSL + KL +A LF ++ +R +P ++TY L+ G+C V + A + N+M+
Sbjct: 267 NCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ PD++ N +++ L + + +A + VM +G PNV +Y ++ +C +
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK------HP 189
+ F+ M + PD Y+ +I GF K +D LLK HP
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 434
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 8/207 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++L ++ K PNV Y +I CK + A F +MV + P Y LI
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF +++ LL EM K PD T+N L+ ++ + + + MI+ +P
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ T+N +M Y + + + +++ M + + PD SY+++I G EA L
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 187 --------KHPILYWMLYAKAIMLTGQ 205
K P++ + +A GQ
Sbjct: 531 EEMLDKGMKTPLIDYNKFAADFHRGGQ 557
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V +N +++ L + +DA LF M +K P V +Y +I FC ME A+
Sbjct: 329 KPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 388
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
++MV + PD + L+ + ++ +L M ++G P+ TYN+L+
Sbjct: 389 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 448
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
K I+N M Q E+ P + ++++++ +
Sbjct: 449 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
YN+++ L K + ++ EM TK + T+ T+ + F + + AV + M
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
V T N L+D+L + KEA+ VL +KE PN++TY L++G+C V+ +
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ I+N M + PD+ ++++M+ G + +A+ L
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L++L++++ +P+V Y +I +L + ++ + ++ EM I P V+ Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
TL+ G C G++E L EM K I D + L++ +G+V+ A N+ ++
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS------IMINGFCK 175
G ++ YN+++ G C V +V+K +F + E+ PD + S +++N
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSD 456
Query: 176 IKMVDEALNLLKHPI 190
V E + L +P+
Sbjct: 457 FSNVLERIGELGYPV 471
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P V +YN I+D+L K+ + A ++ + + T+ L+ G C G++E +
Sbjct: 225 KPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLE 284
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+L M PDV + ++ L EG + + V M ++ KP+V+ Y +L+ G C
Sbjct: 285 ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLC 344
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
V + ++F M ++ D Y ++I GF V A NL
Sbjct: 345 KDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ +L++ +++ +P+V+ Y T++ LCKD V Y LF EM K+I Y
Sbjct: 312 GNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIY 371
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI GF G++ +A L ++V D+ +N ++ L +V +A + V I+
Sbjct: 372 RVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIE 431
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM-EVTPDVWSYSIMINGFCKIKMVD 180
E +P+ T + +M Y + +N+ D N + ++ E+ V Y + F K+ D
Sbjct: 432 EELEPDFETLSPIMVAYVV---MNRLSDFSNVLERIGELGYPVSDY---LTQFFKLLCAD 485
Query: 181 EALNLLKHPILY 192
E N + + Y
Sbjct: 486 EEKNAMALDVFY 497
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH R A QL + + P+ + +I ++ Y ++ +M P V Y
Sbjct: 172 GHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLY 231
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ G + A+ + + + + TF LV L K GR++E +L M +
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
KP+V Y +++ ++ + +++ M + E+ PDV +Y ++ G CK V+
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 182 ALNLL 186
L
Sbjct: 352 GYELF 356
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 34/206 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G +L +++GK + +Y +I+ D V A NL+ ++V + Y
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIY 406
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVIT----------------FNTLVDALSK 105
N +I G C V Q++ A L + + + PD T F+ +++ + +
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Query: 106 EGR--------------VKEAKNVLAV----MIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
G E KN +A+ ++K +V YN LM+ + ++ K+
Sbjct: 467 LGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKS 526
Query: 148 KDIFNTMTQMEVTPDVWSYSIMINGF 173
+F M ++ PD SYSI I F
Sbjct: 527 LSLFYEMRKLGFEPDSSSYSIAICCF 552
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 7/169 (4%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
N ++DSL + KL +A LF ++ +R +P ++TY L+ G+C V + A + N+M+
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+ PD++ N +++ L + + +A + VM +G PNV +Y ++ +C +
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK------HP 189
+ F+ M + PD Y+ +I GF K +D LLK HP
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 8/207 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++L ++ K PNV Y +I CK + A F +MV + P Y LI
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF +++ LL EM K PD T+N L+ ++ + + + MI+ +P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ T+N +M Y + + + +++ M + + PD SY+++I G EA L
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 531
Query: 187 --------KHPILYWMLYAKAIMLTGQ 205
K P++ + +A GQ
Sbjct: 532 EEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++V +N +++ L + +DA LF M +K P V +Y +I FC ME A+
Sbjct: 330 KPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
++MV + PD + L+ + ++ +L M ++G P+ TYN+L+
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
K I+N M Q E+ P + ++++++ +
Sbjct: 450 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
YN+++ L K + ++ EM TK + T+ T+ + F + + AV + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
V T N L+D+L + KEA+ VL +KE PN++TY L++G+C V+ +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ I+N M + PD+ ++++M+ G + +A+ L
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
+ A+PN ++ C++ V D M R+ ++ +N+LI GF V +
Sbjct: 254 EKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDG 313
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
+L M ++ DVIT++T+++A S G +++A V M+K G KP+ Y+ L
Sbjct: 314 IDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAK 373
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
GY KE K +++ T+ +E P+V ++ +I+G+C +D+A+ +
Sbjct: 374 GYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVF 422
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ-MEAAVC 79
PN+ +N ++ + CK K V +A+ + +M + P +TYNT+ + G+ + A
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 80 LLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
++ +MV+K P+ T +V +EGRV++ + M + + N+V +NSL++G+
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
V + + ++ M + V DV +YS ++N + +++A + K
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
++G S + V +++ L + ++A +F + P++I+Y TL+ + Q
Sbjct: 37 VEGSSCR-TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 95
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
+ +++E+ D I FN +++A S+ G +++A L M + G P TYN+
Sbjct: 96 YGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNT 155
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQ---MEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
L+ GY + + ++ ++ + M + ++V P++ ++++++ +CK K V+EA ++K
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+ +V+ Y+T++++ + A +F EMV + P Y+ L G+ + + A
Sbjct: 327 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
LL ++++S P+V+ F T++ G + +A V M K G PN+ T+ +LM GY
Sbjct: 387 LLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYL 445
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE---ALNLLK 187
VK+ K +++ M V P+ ++ ++ + + DE A+N LK
Sbjct: 446 EVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + + + +P+++ Y T++ ++ K ++ SE+ I +
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I F G ME AV L +M +NP T+NTL+ G+ + + +L +M++
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 122 EGE---KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
EG PN+ T+N L+ +C K+V + ++ M + V PD +Y+ +
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDS---LCKDKLVNDAYNLFSEMVTKRISPTV 58
G+ A+Q L +++ P YNT+I K + ++ +L E + P +
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKN--VL 116
T+N L+ +C ++E A ++ +M + PD +T+NT+ ++G A++ V
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+++KE KPN T ++ GYC V M +M V ++ ++ +INGF ++
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Query: 177 ---KMVDEALNLLKH 188
+DE L L+K
Sbjct: 309 MDRDGIDEVLTLMKE 323
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%)
Query: 19 AQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAV 78
++PNVV++ T+I C + ++DA +F++M +SP + T+ TL++G+ V Q A
Sbjct: 395 SRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAE 454
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+L M + P+ TF L +A G E+ +
Sbjct: 455 EVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI 492
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVIT 60
G L+L +++ + +P+ +YN ++ +L K V++A NL M ++ I P V+T
Sbjct: 316 GSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVT 375
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN+LI C + E A + +EM+ K + P + T++ + L V E +LA M
Sbjct: 376 YNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFE---LLAKMR 432
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K G +P V TY L+ C ++ + +++ M + V PD+ SY +MI+G ++
Sbjct: 433 KMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIE 492
Query: 181 EALNLLKH 188
EA K
Sbjct: 493 EAYGYYKE 500
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G R A ++ ++ + +VV Y+++I K +N LF M + I P
Sbjct: 280 IGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKV 339
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEM-VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
YN ++ + A L+ M K I P+V+T+N+L+ L K + +EAK V M
Sbjct: 340 YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM 399
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+++G P + TY++ M +++ + ++ M +M P V +Y ++I C+ +
Sbjct: 400 LEKGLFPTIRTYHAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 180 DEALNL---LKHPILYWMLYAKAIMLTGQFL 207
D L L +K + L + +M+ G FL
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 32/145 (22%)
Query: 15 QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT----------- 63
+ K +PNVV YN++I LCK + +A +F EM+ K + PT+ TY+
Sbjct: 365 EEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV 424
Query: 64 ---------------------LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA 102
LI C + + L +EM K++ PD+ ++ ++
Sbjct: 425 FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 484
Query: 103 LSKEGRVKEAKNVLAVMIKEGEKPN 127
L G+++EA M +G +PN
Sbjct: 485 LFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISP-TVITYNTLIFGFC-IVGQMEAAVCLLNE 83
+ +++ +LC+ K V+DA +L K P ++N ++ G+C ++G A + E
Sbjct: 235 FQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWME 292
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
M + DV+++++++ SK G + + + M KE +P+ YN+++
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 144 VNKTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKMVDEA 182
V++ +++ TM + + + P+V +Y+ +I CK + +EA
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEA 392
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 40/204 (19%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL---IFGFCIVGQMEAAV 78
+V Y+++I L K + + A+ L EM ++ SP+++ TL I +C V + A+
Sbjct: 160 SVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAI 217
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKE-------------------------------- 106
+ + + F +L+ AL +
Sbjct: 218 NTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWC 277
Query: 107 ---GRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
G +EA+ V M G K +VV+Y+S++ Y +NK +F+ M + + PD
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 164 WSYSIMINGFCKIKMVDEALNLLK 187
Y+ +++ K V EA NL+K
Sbjct: 338 KVYNAVVHALAKASFVSEARNLMK 361
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G AL++ R ++ + + N+ Y+ +I+ K K +A+ +F +MV + + P VI
Sbjct: 497 VGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVIL 556
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I FC +G M+ A+ + EM P TF ++ +K G ++ + V +M
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G P V T+N L++G +++ K +I + MT V+ + +Y+ ++ G+ +
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 181 EALNLL 186
+A
Sbjct: 677 KAFEYF 682
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 88/178 (49%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+++L ++ N Y I+ A+ F+ + + + + TY L+
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G+M++A+ + EM ++I + +N L+D ++ G V EA +++ M KEG KP
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
++ TY S + ++N+ M + V P++ +Y+ +I G+ + + ++AL+
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G T A + ++Q + ++ Y ++ + CK + A + EM + I
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI G+ G + A L+ +M + + PD+ T+ + + A SK G + A + M
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G KPN+ TY +L+ G+ K + M M + PD Y ++ +
Sbjct: 792 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 181 EA 182
EA
Sbjct: 852 EA 853
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+V++YN II + C ++ A EM R PT T+ +I G+ G M ++
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ + M P V TFN L++ L ++ ++++A +L M G N TY +M GY
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
V + K + F + + D+++Y ++ CK + AL + K
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 91/186 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH A + + N +Y II + C+ + A L EM + I + Y
Sbjct: 393 GHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIY 452
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+T++ G+ +V + + + + P V+T+ L++ +K G++ +A V VM +
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
EG K N+ TY+ +++G+ +K+ +F M + + PDV Y+ +I+ FC + +D
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 182 ALNLLK 187
A+ +K
Sbjct: 573 AIQTVK 578
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R +L++ ++ P V +N +I+ L + + + A + EM +S TY
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ G+ VG A + + ++ D+ T+ L+ A K GR++ A V M
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
N YN L+DG+ +V + D+ M + V PD+ +Y+ I+ K ++
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 182 ALNLLK 187
A ++
Sbjct: 783 ATQTIE 788
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + +++ + P +Y ++I + + +++A + +M + I +++TY
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 62 NTLIFGFCIVGQMEAAVCLLNE--MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+ ++ GF G EAA +E + K++N + + ++ A + ++ A+ ++ M
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI--YGKIIYAHCQTCNMERAEALVREM 440
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+EG + Y+++MDGY +V + K +F + + TP V +Y +IN + K+ +
Sbjct: 441 EEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKI 500
Query: 180 DEALNLLK 187
+AL + +
Sbjct: 501 SKALEVSR 508
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG+ A+Q ++++Q +P + II K + + +F M PTV T
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N LI G QME AV +L+EM L ++ + T+ ++ + G +A +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
EG ++ TY +L+ C + + M+ + + + Y+I+I+G+ + V
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 181 EALNLLKH 188
EA +L++
Sbjct: 747 EAADLIQQ 754
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 82/166 (49%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P VV Y +I+ K ++ A + M + + + TY+ +I GF + A +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+MV + + PDVI +N ++ A G + A + M K +P T+ ++ GY
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ ++ ++F+ M + P V +++ +ING + + +++A+ +L
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L++Q++ + +P++ Y + I + K +N A EM + P + TY
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TLI G+ E A+ EM I PD ++ L+ +L + EA VM
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVM 860
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+ MY+ +I K A +FS MV K + + +TYN+L+ +
Sbjct: 251 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSK 307
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ ++M I PDV+++ L+ A + R +EA +V M+ G +P YN L+D +
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ V + K +F +M + + PD+WSY+ M++ + ++ A K
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 99/192 (51%), Gaps = 8/192 (4%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ A ++L + + PNV+ Y +++S + N+A +F M + P+ IT
Sbjct: 159 LGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAIT 218
Query: 61 YNTLIFGFCIVGQMEAAV----CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
Y ++ F + + A LL+E + PD ++ ++ K G ++A+ V
Sbjct: 219 YQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+ M+ +G + VTYNSLM KEV+K I++ M + ++ PDV SY+++I + +
Sbjct: 278 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 334
Query: 177 KMVDEALNLLKH 188
+ +EAL++ +
Sbjct: 335 RREEEALSVFEE 346
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
Q+Q QP+VV Y +I + + + +A ++F EM+ + PT YN L+ F I G
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
+E A + M I PD+ ++ T++ A ++ A+ + +G +PN+VTY
Sbjct: 371 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 133 SLMDGYCLVKEVNKTKDIFNTM 154
+L+ GY +V K +++ M
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKM 452
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A ++ + GK + V YN+++ K V+ Y+ +M I P V++Y
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSY 324
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI + + E A+ + EM+ + P +N L+DA + G V++AK V M +
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ P++ +Y +++ Y ++ + F + P++ +Y +I G+ K V++
Sbjct: 385 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 444
Query: 182 ALNL 185
+ +
Sbjct: 445 MMEV 448
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL + ++ +P YN ++D+ +V A +F M RI P + +Y T++
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ ME A + + P+++T+ TL+ +K V++ V M G K
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 459
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
N ++MD K + M V PD + +++++ ++EA L
Sbjct: 460 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 94 ITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT 153
I F L+ A K G A+ VL+V+ K G PNV++Y +LM+ Y + N + IF
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 154 MTQMEVTPDVWSYSIMINGFC---KIKMVDEALNLL 186
M P +Y I++ F K K +E L
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++ YN +I C+ + +Y++ +EM K I P ++ +I GF + +
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+L M + +N V T+N + +L K + KEAK +L M+ G KPN VTY+ L+ G+C
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
+ + K +F M PD Y +I CK + AL+L K +
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%)
Query: 54 ISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAK 113
I P + TYN +I FC G ++ ++ EM K I P+ +F ++ E + E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 114 NVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
VLA+M G V TYN + C K+ + K + + M + P+ +YS +I+GF
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 174 CKIKMVDEALNLLK 187
C +EA L K
Sbjct: 303 CNEDDFEEAKKLFK 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
++ A LL + +PN V Y+ +I C + +A LF MV + P Y T
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
LI+ C G E A+ L E + K+ P +LV+ L+K+ +V+EAK ++ +KE
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIG-QVKEK 391
Query: 124 EKPNVVTYNSL 134
NV +N +
Sbjct: 392 FTRNVELWNEV 402
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
++L ++ + V YN I SLCK K +A L M++ + P +TY+ LI GF
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C E A L MV + PD + TL+ L K G + A ++ +++ P+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQ 156
SL++G +V + K++ + +
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
+++ K +PN + +I + ++ + + M + ++ V TYN I C
Sbjct: 212 EMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
+ + A LL+ M+ + P+ +T++ L+ E +EAK + +M+ G KP+ Y
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYF 331
Query: 133 SLMDGYCLVKEVNKTKDIFNTMTQM--EVTPDVW--SYSIM---INGFCKIKMVDEALNL 185
+L+ Y L K + F T + E W S+SIM +NG K V+EA L
Sbjct: 332 TLI--YYLCKGGD-----FETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKEL 384
Query: 186 L 186
+
Sbjct: 385 I 385
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+ MY+ +I K A +FS MV K + + +TYN+L+ +
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSK 300
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ ++M I PDV+++ L+ A + R +EA +V M+ G +P YN L+D +
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ V + K +F +M + + PD+WSY+ M++ + ++ A K
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 99/192 (51%), Gaps = 8/192 (4%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ A ++L + + PNV+ Y +++S + N+A +F M + P+ IT
Sbjct: 152 LGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAIT 211
Query: 61 YNTLIFGFCIVGQMEAAV----CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
Y ++ F + + A LL+E + PD ++ ++ K G ++A+ V
Sbjct: 212 YQIILKTFVEGDKFKEAEEVFETLLDEKK-SPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+ M+ +G + VTYNSLM KEV+K I++ M + ++ PDV SY+++I + +
Sbjct: 271 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 327
Query: 177 KMVDEALNLLKH 188
+ +EAL++ +
Sbjct: 328 RREEEALSVFEE 339
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
Q+Q QP+VV Y +I + + + +A ++F EM+ + PT YN L+ F I G
Sbjct: 304 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
+E A + M I PD+ ++ T++ A ++ A+ + +G +PN+VTY
Sbjct: 364 MVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 133 SLMDGYCLVKEVNKTKDIFNTM 154
+L+ GY +V K +++ M
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKM 445
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A ++ + GK + V YN+++ K V+ Y+ +M I P V++Y
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYD---QMQRSDIQPDVVSY 317
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI + + E A+ + EM+ + P +N L+DA + G V++AK V M +
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+ P++ +Y +++ Y ++ + F + P++ +Y +I G+ K V++
Sbjct: 378 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 437
Query: 182 ALNL 185
+ +
Sbjct: 438 MMEV 441
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL + ++ +P YN ++D+ +V A +F M RI P + +Y T++
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ ME A + + P+++T+ TL+ +K V++ V M G K
Sbjct: 393 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 452
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
N ++MD K + M V PD + +++++ ++EA L
Sbjct: 453 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 94 ITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT 153
I F L+ A K G A+ VL+V+ K G PNV++Y +LM+ Y + N + IF
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 154 MTQMEVTPDVWSYSIMINGFC---KIKMVDEALNLL 186
M P +Y I++ F K K +E L
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +++++G +P V+ Y TII C+ Y + SEM P ITY T++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE-GEK 125
+ E A+ + M PD + +N L+ L++ GR++EA+ V V + E G
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV-TPDVWSYSIMINGFCKIKMVDEALN 184
N TYNS++ YC E +K ++ M + PDV +Y ++ K V E
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 185 LLK 187
LLK
Sbjct: 423 LLK 425
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN +N I CK V +A EM P VI+Y T+I +C + +
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L+EM P+ IT+ T++ +L+ + +EA V M + G KP+ + YN L+
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 141 VKEVNKTKDIFN-TMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + + +F M ++ V+ + +Y+ MI +C D+A+ LLK
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + ++ + N N ++D+LCK+K V A + ++ + I+P T+
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTF 227
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N I G+C ++E A+ + EM P VI++ T++ ++ + +L+ M
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN +TY ++M KE + + M + PD Y+ +I+ + ++E
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 182 ALNLLK 187
A + +
Sbjct: 348 AERVFR 353
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +++++G +P V+ Y TII C+ Y + SEM P ITY T++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE-GEK 125
+ E A+ + M PD + +N L+ L++ GR++EA+ V V + E G
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV-TPDVWSYSIMINGFCKIKMVDEALN 184
N TYNS++ YC E +K ++ M + PDV +Y ++ K V E
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 185 LLK 187
LLK
Sbjct: 423 LLK 425
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN +N I CK V +A EM P VI+Y T+I +C + +
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L+EM P+ IT+ T++ +L+ + +EA V M + G KP+ + YN L+
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 141 VKEVNKTKDIFN-TMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + + +F M ++ V+ + +Y+ MI +C D+A+ LLK
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLK 389
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ + ++ + N N ++D+LCK+K V A + ++ + I+P T+
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTF 227
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N I G+C ++E A+ + EM P VI++ T++ ++ + +L+ M
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN +TY ++M KE + + M + PD Y+ +I+ + ++E
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 182 ALNLLK 187
A + +
Sbjct: 348 AERVFR 353
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL ++R + +P +Y+ ++ + + + +A + F EM + V +
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+LI FC +M+ +L EM K + P+ + N ++ L + G EA +V MIK
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK 405
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
E P+ TY ++ +C KE+ ++ M + V P + ++S++ING C+ + +
Sbjct: 406 VCE-PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQK 464
Query: 182 ALNLLKHPI 190
A LL+ I
Sbjct: 465 ACVLLEEMI 473
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN+V +N ++ +LCK K V A +F M R +P TY+ L+ G+ + A +
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
EM+ +PD++T++ +VD L K GRV EA ++ M KP Y+ L+ Y
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGT 319
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + D F M + + DV ++ +I FCK + +LK
Sbjct: 320 ENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKE 367
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++ R++ P++V Y+ ++D LCK V++A + M PT Y+ L+
Sbjct: 256 AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVH 315
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ ++E AV EM + DV FN+L+ A K R+K VL M +G P
Sbjct: 316 TYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP 375
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N + N ++ E ++ D+F M ++ PD +Y+++I FC+ K ++ A +
Sbjct: 376 NSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVW 434
Query: 187 KH 188
K+
Sbjct: 435 KY 436
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ +++ + +V ++N++I + CK + + Y + EM +K ++P + N ++
Sbjct: 326 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+ + A + +M+ K PD T+ ++ ++ ++ A V M K+G P
Sbjct: 386 HLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK------IKMVD 180
++ T++ L++G C + K + M +M + P ++ + K +K ++
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLN 504
Query: 181 EALNLL 186
E +N+L
Sbjct: 505 EKMNVL 510
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + R++ K +P+ Y +I C+ K + A ++ M K + P++ T+
Sbjct: 391 GEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ LI G C + A LL EM+ I P +TF L L KE R ++VL +
Sbjct: 450 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER----EDVLKFL-- 503
Query: 122 EGEKPNVVTYNSLMD 136
EK NV+ L D
Sbjct: 504 -NEKMNVLVNEPLCD 517
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+V Y+ +I + Q + L+N M K + +V TF ++ ++ +V EA
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
VM K PN+V +N L+ C K V K +++F M TPD +YSI++ G+ K
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKE 250
Query: 177 KMVDEALNLLKHPI 190
+ +A + + I
Sbjct: 251 PNLPKAREVFREMI 264
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+ + + N+++D+L K+ + A+ +F ++ I P T+N LI GFC + + A
Sbjct: 236 KTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARA 294
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+++ M + PDV+T+ + V+A KEG + +L M + G PNVVTY +M
Sbjct: 295 MMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLG 354
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
K+V + ++ M + PD YS +I+ K +A + +
Sbjct: 355 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+ +N +I CK + +DA + M +P V+TY + + +C G
Sbjct: 270 KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE 329
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+L EM NP+V+T+ ++ +L K +V EA V M ++G P+ Y+SL+
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+IF MT V DV Y+ MI+ + AL LLK
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKR 438
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 3/184 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R ++L +++ PNVV Y ++ SL K K V +A ++ +M P Y
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM-I 120
++LI G+ + A + +M + + DV+ +NT++ A R + A +L M
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 121 KEGE--KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
+EGE PNV TY L+ C K++ + + M + +V+ DV +Y ++I G C
Sbjct: 442 EEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Query: 179 VDEA 182
V+EA
Sbjct: 502 VEEA 505
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISP--TVITYNTLIFGFCIVGQMEAAVCLLNE 83
YN ++D L K + + + L +EM S T+ T + ++ G+ AV E
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228
Query: 84 MVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK 142
M + D I N+L+DAL KE ++ A V + + KP+ T+N L+ G+C +
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFCKAR 287
Query: 143 EVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK---IKMVDEALNLLK 187
+ + + + + M E TPDV +Y+ + +CK + V+E L ++
Sbjct: 288 KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 1 MGHTRP--ALQLLRQIQ---GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS 55
+ H+R AL+LL++++ G+S PNV Y ++ C K + L MV +S
Sbjct: 424 LHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVS 483
Query: 56 PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAK 113
V TY LI G C+ G++E A E V K + P T LVD L K+ + EAK
Sbjct: 484 IDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN-MAEAK 540
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
++L R++ + N V Y T+I L + + A +F EMV+ + P ++TYN L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 68 FCIVGQMEAAVC---------LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
C G++E A+ L + LK + P+V+T+ T++ K+G +EA +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
M ++G P+ TYN+L+ + + + ++ M D +Y ++ +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKD-KL--------VNDAYNLFSEMVTKRISPT 57
A ++ +++ P+++ YN ++D LCK+ KL V D ++LF + K + P
Sbjct: 35 AQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPN 94
Query: 58 VITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLA 117
V+TY T+I GFC G E A L +M PD T+NTL+ A ++G K A
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGD----KAASA 150
Query: 118 VMIKE 122
+IKE
Sbjct: 151 ELIKE 155
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L EM + + + +T+ TL+ L + G A+ + M+ +G P+++TYN L+DG C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 140 ---------LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ +V D+F +++ V P+V +Y+ MI+GFCK +EA L +
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L + K +PNVV Y T+I CK +AY LF +M P TY
Sbjct: 74 GKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTY 133
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEA 112
NTLI G A+ L+ EM D T+ + D L +GR+ +
Sbjct: 134 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKG 183
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 90/165 (54%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+L+++ G+ PN + I+ C+ V++A+ + M+ IS +V ++ L+ GF
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVV 129
G+ + AV L N+M+ +P+++T+ +L+ G V EA VL+ + EG P++V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
N ++ Y + + + +F ++ + ++ PD ++++ +++ C
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG---QMEAA 77
PN N ++D K +VN A +F + + +++ + FC G +
Sbjct: 141 PNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGV 196
Query: 78 VCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
+L M+ + P+ F ++ + G V EA V+ +MI G +V ++ L+ G
Sbjct: 197 KIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSG 256
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ E K D+FN M Q+ +P++ +Y+ +I GF + MVDEA +L
Sbjct: 257 FFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVL 305
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A Q++ + +V +++ ++ + A +LF++M+ SP ++TY
Sbjct: 226 GCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTY 285
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI GF +G ++ A +L+++ + + PD++ N ++ ++ GR +EA+ V + K
Sbjct: 286 TSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEK 345
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
P+ T+ S++ CL + + I + + D+ + +++ N F KI
Sbjct: 346 RKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG---TDFDLVTGNLLSNCFSKIGYNSY 402
Query: 182 ALNLL 186
AL +L
Sbjct: 403 ALKVL 407
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ AL++L + K + Y + +LC+ A ++ ++ ++
Sbjct: 397 IGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHF 456
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
++ +I +G+ AV L +L+ DV+++ + L + R++EA ++ M
Sbjct: 457 HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMK 516
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+ G PN TY +++ G C KE K + I Q V D
Sbjct: 517 EGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A +L ++Q + P++V+ N +I + + +A +F+ + +++ P T
Sbjct: 295 LGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYT 354
Query: 61 YNTLIFGFCIVGQME--------------------------------AAVCLLNEMVLKS 88
+ +++ C+ G+ + A+ +L+ M K
Sbjct: 355 FASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKD 414
Query: 89 INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTK 148
D T+ + AL + G + A + ++IKE + + +++++D + + N
Sbjct: 415 FALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAV 474
Query: 149 DIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+F + DV SY++ I G + K ++EA +L
Sbjct: 475 HLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 80/179 (44%), Gaps = 7/179 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNL---FSEMVTKRISPTVITYNT 63
AL++ I+ + N ++ + C D + M+ + P +
Sbjct: 162 ALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQ 217
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
++ C G + A ++ M+ I+ V ++ LV + G ++A ++ MI+ G
Sbjct: 218 ILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG 277
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
PN+VTY SL+ G+ + V++ + + + + PD+ ++MI+ + ++ +EA
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 96/184 (52%), Gaps = 5/184 (2%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
++ +++ + + + +N +I++ + + DA +M ++PT TYNTLI G+
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 70 IVGQMEAAVCLLNEMVLKS---INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
I G+ E + LL+ M+ + + P++ TFN LV A K+ +V+EA V+ M + G +P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 127 NVVTYNSLMDGYCLVKE-VNKTKDIFNTMTQME-VTPDVWSYSIMINGFCKIKMVDEALN 184
+ VTYN++ Y E V ++ M E P+ + I++ G+C+ V + L
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 185 LLKH 188
++
Sbjct: 282 FVRR 285
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 26/195 (13%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC------- 69
+ A+PN ++ C++ V D M R+ ++ +N+LI GF
Sbjct: 254 EKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDG 313
Query: 70 ------------------IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKE 111
+VG + V +L M ++ DVIT++T+++A S G +++
Sbjct: 314 IDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 373
Query: 112 AKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
A V M+K G KP+ Y+ L GY KE K +++ T+ +E P+V ++ +I+
Sbjct: 374 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVIS 432
Query: 172 GFCKIKMVDEALNLL 186
G+C +D+A+ +
Sbjct: 433 GWCSNGSMDDAMRVF 447
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ + +Q+L ++ + + +V+ Y+T++++ + A +F EMV + P
Sbjct: 333 VGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 392
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+ L G+ + + A LL ++++S P+V+ F T++ G + +A V M
Sbjct: 393 YSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 451
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K G PN+ T+ +LM GY VK+ K +++ M V P+ ++ ++ + + D
Sbjct: 452 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTD 511
Query: 181 E---ALNLLK 187
E A+N LK
Sbjct: 512 ESNKAINALK 521
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
++G S + V +++ L + ++A +F + P++I+Y TL+ + Q
Sbjct: 37 VEGSSCR-TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQ 95
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
+ +++E+ D I FN +++A S+ G +++A L M + G P TYN+
Sbjct: 96 YGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNT 155
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQ---MEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
L+ GY + + ++ ++ + M + ++V P++ ++++++ +CK K V+EA ++K
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A + + + +P+++ Y T++ ++ K ++ SE+ I +
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N +I F G ME AV L +M +NP T+NTL+ G+ + + +L +M++
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 122 EGE---KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIM 169
EG PN+ T+N L+ +C K+V + ++ M + V PD +Y+ +
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 62/229 (27%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ-MEAAVC 79
PN+ +N ++ + CK K V +A+ + +M + P +TYNT+ + G+ + A
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 80 LLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
++ +MV+K P+ T +V +EGRV++ + M + + N+V +NSL++G+
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 139 --------------------------------------CLVKEVN--------------- 145
L+KE N
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 146 -------KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
K +F M + V PD +YSI+ G+ + K +A LL+
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 414
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 81.3 bits (199), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 93/181 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ + +++Q P+ Y+ II+ L K + A+ LF EMV + +P ++T+N +I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
E A+ L +M PD +T++ +++ L G ++EA+ V A M ++ P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ Y L+D + V+K + M Q + P+V + + +++ F ++ + EA NLL
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 187 K 187
+
Sbjct: 628 Q 628
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 84/174 (48%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL ++ +PN V YN +I S + + +A N+F++M P +TY TLI
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G ++ A+ + M ++PD T++ +++ L K G + A + M+ +G PN+
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
VT+N ++ + + ++ M PD +YSI++ ++EA
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH A +L ++ G+ PN+V +N +I K + A L+ +M P +TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 62 NTL--IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+ + + G C G +E A + EM K+ PD + LVD K G V +A M
Sbjct: 538 SIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN-------- 171
++ G +PNV T NSL+ + V +++ ++ +M + + P + +Y+++++
Sbjct: 596 LQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSN 655
Query: 172 ---GFC 174
GFC
Sbjct: 656 FDMGFC 661
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
+ + A+ + Q+Q +P+ V Y T+ID K ++ A +++ M +SP TY+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
+I G + AA L EMV + P+++TFN ++ +K + A + M
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 123 GEKPNVVTYNSLMD--GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G +P+ VTY+ +M+ G+C E + + +F M + PD Y ++++ + K VD
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLE--EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVD 586
Query: 181 EA 182
+A
Sbjct: 587 KA 588
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y T++ +L + K + L EMV P +TYN LI + ++ A+ + N+M
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVK--E 143
PD +T+ TL+D +K G + A ++ M + G P+ TY+ +++ CL K
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN--CLGKAGH 479
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ +F M TP++ +++IMI K + + AL L +
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYR 523
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 95 TFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTM 154
T+ T+V L + + E +L M+++G KPN VTYN L+ Y + + ++FN M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 155 TQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ PD +Y +I+ K +D A+++ +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQ 453
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 3/182 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL++ + I +S + NV + N+I+ L K+ ++ LF +M + P V+TYNTL+
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLA 209
Query: 67 GFCIV--GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
G CI A+ L+ E+ I D + + T++ + GR +EA+N + M EG
Sbjct: 210 G-CIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGH 268
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
PN+ Y+SL++ Y + K ++ M + + P+ + ++ + K + D +
Sbjct: 269 SPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRE 328
Query: 185 LL 186
LL
Sbjct: 329 LL 330
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++L+ ++ Q + VMY T++ + +A N +M + SP + Y++L+
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLN 280
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G + A L+ EM + P+ + TL+ K G ++ +L+ + G
Sbjct: 281 SYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAE 340
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N + Y LMDG ++ + + IF+ M V D ++ SIMI+ C+ K EA L
Sbjct: 341 NEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELS 400
Query: 187 K 187
+
Sbjct: 401 R 401
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A +L+ +++ PN VM T++ K L + + L SE+ + + + Y
Sbjct: 286 GDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G G++E A + ++M K + D + ++ AL + R KEAK +
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSET 405
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
EK ++V N+++ YC E+ + M + V+PD ++ I+I F K K+
Sbjct: 406 TYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKL 462
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++L ++++ + + +VV YNT+I ++ + V +F EM + P V T+
Sbjct: 238 GKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NT+I C G+M A +L+EM + PD IT+ L L K E ++ MI+
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIR 354
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P + TY LM + + ++ TM + TPD +Y+ +I+ + M+D
Sbjct: 355 SGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDM 414
Query: 182 A 182
A
Sbjct: 415 A 415
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 17/187 (9%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+ +++ + ++ Y+ +D +CK A L+ EM ++R+ V+ YNT+I
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
+E + + EM + P+V T NT++ L ++GR+++A +L M K G +P+
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 129 VTYNSLMDGYCLVKEVNKTKDI---FNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+TY CL + K +I F M + V P + +Y +++ F E
Sbjct: 330 ITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKF-------ERWGF 376
Query: 186 LKHPILY 192
L+ P+LY
Sbjct: 377 LQ-PVLY 382
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 32/153 (20%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL-- 64
+++ R+++ + +PNV +NTII LC+D + DAY + EM + P ITY L
Sbjct: 278 GIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS 337
Query: 65 ----------IFGFCIVG----QMEAAVCLLNEM-----------VLKSIN-----PDVI 94
+FG I +M+ V L+ + V K++ PD
Sbjct: 338 RLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSA 397
Query: 95 TFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+N ++DAL ++G + A+ MI+ G P
Sbjct: 398 AYNAVIDALIQKGMLDMAREYEEEMIERGLSPR 430
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N ++N I+ K + +M T+ ++ + +Y+ + C G+ AV L
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
EM + + DV+ +NT++ A+ V+ V M + G +PNV T+N+++ C
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + + M + PD +Y + F +++ E L+L
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLF 349
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF-----CIVGQMEA 76
+ V +N I S C+ +++ AY EM ++P V+TY TLI C++G
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN--- 232
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
L N MVLK P++ TFN + L R +A ++L +M K +P+ +TYN ++
Sbjct: 233 --GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK 290
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
G+ L + + + ++ M P++ Y MI+ CK D A + K
Sbjct: 291 GFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCK 341
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K +PN+ +N I L + DA +L M ++ P ITYN +I GF + +
Sbjct: 241 KGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDM 300
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A + M K P++ + T++ L K G A + +++ PN+ T L+
Sbjct: 301 AERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLK 360
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTP 161
G ++++ K I + V P
Sbjct: 361 GLVKKGQLDQAKSIME-LVHRRVPP 384
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 92/187 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+T A+ + ++++ +P YN +I+ K ++ L+ EM + + P + TY
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ F G E A + ++ + PDV +N L+++ S+ G A + ++M
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P+ +YN ++D Y + + +F M ++ + P + S+ ++++ + K + V +
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 182 ALNLLKH 188
++K
Sbjct: 445 CEAIVKE 451
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
++ S QP+V+ +N +ID+ + +A +L+ +++ R PT TY LI +C+ G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 74 MEAAVCLLNEMVLKSINPDVI---TFNTLVDAL-SKEGRVKEAKNVLAVMIKEGEKPNVV 129
+E A +L EM ++P I +N ++ L ++G +EA +V M ++ KP
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
TYN +++ Y + + ++ M + P++ +Y+ ++N F + + ++A + +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+ +L +++ +PN+ Y ++++ ++ L A +F ++ + P V YN L+
Sbjct: 305 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 364
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G A + + M PD ++N +VDA + G +A+ V M + G P
Sbjct: 365 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 424
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+ ++ L+ Y ++V K + I M++ V PD + + M+N + ++
Sbjct: 425 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ Q+Q +P+V +YN +++S + A +FS M P +Y
Sbjct: 335 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 394
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ + G A + EM I P + + L+ A SK V + + ++ M +
Sbjct: 395 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 454
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P+ NS+++ Y + + K + I M T D+ +Y+I+IN + K ++
Sbjct: 455 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 514
Query: 182 ALNLL 186
L
Sbjct: 515 IEELF 519
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 90/189 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A ++ +Q +P+ YN ++D+ + L +DA +F EM I+PT+ ++
Sbjct: 370 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 429
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ + + ++ EM + PD N++++ + G+ + + +LA M
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 489
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
++ TYN L++ Y + + +++F + + PDV +++ I + + K+ +
Sbjct: 490 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 549
Query: 182 ALNLLKHPI 190
L + + I
Sbjct: 550 CLEVFEEMI 558
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + + +L Q++ +P++V Y ++ + D+ A LF E++ ++P V TY
Sbjct: 265 GRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTY 324
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N I G C +E A+ +++ M P+V+T+N L+ AL K G + AK + M
Sbjct: 325 NVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMET 384
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G N T++ ++ Y V EV + M V +I+ C+ ++D+
Sbjct: 385 NGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQ 444
Query: 182 ALNLLKH 188
A+ LL H
Sbjct: 445 AVELLAH 451
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 11 LRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCI 70
L ++ P + Y ++ L + + ++ ++M R+ P ++ Y ++ G
Sbjct: 239 LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIA 298
Query: 71 VGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
A L +E++L + PDV T+N ++ L K+ ++ A +++ M K G +PNVVT
Sbjct: 299 DEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVT 358
Query: 131 YNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF-------CKIKMVDEAL 183
YN L+ ++++ K ++ M V + ++ IMI+ + C +++EA
Sbjct: 359 YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAF 418
Query: 184 NL 185
N+
Sbjct: 419 NM 420
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK--DKLVNDAYNLFSEMVTKRISPTV 58
+G A +L+R + S + +Y+ ++ S+CK D D ++ R SP +
Sbjct: 192 IGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGL 251
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
Y ++ G+ + V +LN+M + PD++ + ++ + + +A +
Sbjct: 252 RDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDE 311
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
++ G P+V TYN ++G C ++ + ++M ++ P+V +Y+I+I K
Sbjct: 312 LLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGD 371
Query: 179 VDEALNLLKH 188
+ A L K
Sbjct: 372 LSRAKTLWKE 381
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 92/187 (49%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+T A+ + ++++ +P YN +I+ K ++ L+ EM + + P + TY
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ F G E A + ++ + PDV +N L+++ S+ G A + ++M
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P+ +YN ++D Y + + +F M ++ + P + S+ ++++ + K + V +
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 182 ALNLLKH 188
++K
Sbjct: 423 CEAIVKE 429
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
++ S QP+V+ +N +ID+ + +A +L+ +++ R PT TY LI +C+ G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 74 MEAAVCLLNEMVLKSINPDVI---TFNTLVDAL-SKEGRVKEAKNVLAVMIKEGEKPNVV 129
+E A +L EM ++P I +N ++ L ++G +EA +V M ++ KP
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
TYN +++ Y + + ++ M + P++ +Y+ ++N F + + ++A + +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 81/170 (47%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+ +L +++ +PN+ Y ++++ ++ L A +F ++ + P V YN L+
Sbjct: 283 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 342
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G A + + M PD ++N +VDA + G +A+ V M + G P
Sbjct: 343 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+ ++ L+ Y ++V K + I M++ V PD + + M+N + ++
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ Q+Q +P+V +YN +++S + A +FS M P +Y
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 372
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ + G A + EM I P + + L+ A SK V + + ++ M +
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P+ NS+++ Y + + K + I M T D+ +Y+I+IN + K ++
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492
Query: 182 ALNLL 186
L
Sbjct: 493 IEELF 497
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 90/189 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A ++ +Q +P+ YN ++D+ + L +DA +F EM I+PT+ ++
Sbjct: 348 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 407
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ + + ++ EM + PD N++++ + G+ + + +LA M
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 467
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
++ TYN L++ Y + + +++F + + PDV +++ I + + K+ +
Sbjct: 468 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 527
Query: 182 ALNLLKHPI 190
L + + I
Sbjct: 528 CLEVFEEMI 536
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 96/186 (51%), Gaps = 1/186 (0%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
+ R A++L + + + + +N ++ LC+ V+ A ++F+ I +YN
Sbjct: 201 YVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGNIPFDSCSYN 259
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
+I G+ +G++E +L EMV PD ++++ L++ L + GR+ ++ + + +
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
G P+ YN+++ + ++ +++ + M E P++ +YS +++G K + V +A
Sbjct: 320 GNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDA 379
Query: 183 LNLLKH 188
L + +
Sbjct: 380 LEIFEE 385
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
+ +L+ + + P++ +DS + V A LF E + + + ++N L+
Sbjct: 171 MDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRC 230
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
C + AA + N +I D ++N ++ SK G V+E + VL M++ G P+
Sbjct: 231 LCERSHVSAAKSVFNAKK-GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPD 289
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++Y+ L++G +N + +IF+ + PD Y+ MI F + DE++ +
Sbjct: 290 CLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYR 349
Query: 188 H 188
Sbjct: 350 R 350
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
+++ R++ + +PN+ Y+ ++ L K + V+DA +F EM+++ + PT + +
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLK 403
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G AA+ + + + L+ LS+ G+ NV M + G
Sbjct: 404 PLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPS 463
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS 167
+V Y ++DG C++ + + + P+ + YS
Sbjct: 464 DVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYS 504
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 60/139 (43%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G ++L+++ P+ + Y+ +I+ L + +ND+ +F + K P
Sbjct: 268 LGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANV 327
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN +I F + ++ M+ + P++ T++ LV L K +V +A + M+
Sbjct: 328 YNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEML 387
Query: 121 KEGEKPNVVTYNSLMDGYC 139
G P S + C
Sbjct: 388 SRGVLPTTGLVTSFLKPLC 406
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 10 LLRQIQGKSA-QPNV------VMYNTIIDSLCKDKLVNDAYNLFSEMVTKR--ISPTVIT 60
L++++GKSA Q ++ + + + D L + L +A F + + ++ V +
Sbjct: 94 FLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGS 153
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+ ++ + +L MV + +NPD+ +D+ + V+ A +
Sbjct: 154 YSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G K + ++N+L+ C V+ K +FN + + D SY+IMI+G+ K+ V+
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEVE 272
Query: 181 EALNLLKH 188
E +LK
Sbjct: 273 EMEKVLKE 280
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++ +++ ++ +P+ ++ ++I+ L +K +NDA F + TYN L+
Sbjct: 286 AIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVG 345
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+C +ME A ++EM LK + P+ T++ ++ L + R KEA V M E P
Sbjct: 346 AYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---P 402
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
V TY ++ +C + ++ I++ M V P + +S +I C +DEA
Sbjct: 403 TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
R+++ + +P+VV Y II++ CK K +A F+EM + P+ + +LI G
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 315
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
++ A+ + T+N LV A R+++A + M +G PN TY
Sbjct: 316 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTY 375
Query: 132 NSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+ ++ + L++ + ++K+ + M P V +Y IM+ FC + +D A+ +
Sbjct: 376 DIIL--HHLIR-MQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKI 426
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
YN +I+SL K K ++L +M K++ + T+ + + +++ A+ ++M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEAIGAFHKME 189
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ FN ++D LSK V +A+ V M K+ +P++ +Y L++G+ +
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ ++ M PDV +Y I+IN CK K +EA+
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 41/195 (21%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF----------------- 68
+N ++D+L K + V DA +F +M KR P + +Y L+ G+
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 69 ------------------CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVK 110
C + E A+ NEM ++ P F +L++ L E ++
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 111 EAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME---VTPDVWSYS 167
+A G TYN+L+ YC + + +D + T+ +M V P+ +Y
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQ---RMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 168 IMINGFCKIKMVDEA 182
I+++ +++ EA
Sbjct: 377 IILHHLIRMQRSKEA 391
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + + +++ K PN Y+ I+ L + + +AY ++ M + PTV TY ++
Sbjct: 356 AYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVR 412
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
FC +++ A+ + +EM K + P + F++L+ AL E ++ EA M+ G +P
Sbjct: 413 MFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+ NVV +NT+ID + ++ A LF EM + I +++N+++ G+++ A+
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMN 192
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L M + DV+++ +VD L+K G+V EA+ + M + N++++N+++ GY
Sbjct: 193 LFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYA 244
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++ +F M + D S++ MI GF + + +++A L
Sbjct: 245 QNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLF 287
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+R I S++P V +I LCK + +A LF + + V+T+ +I G
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITG 86
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+ +G M A L + + + +V+T+ +V + ++ ++ ++ +E + N
Sbjct: 87 YIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQL----SIAEMLFQEMPERN 139
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL- 186
VV++N+++DGY ++K ++F+ M + + S++ M+ + +DEA+NL
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFE 195
Query: 187 ---KHPILYWMLYAKAIMLTGQ 205
+ ++ W + G+
Sbjct: 196 RMPRRDVVSWTAMVDGLAKNGK 217
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKR------ISPTVITYNTLIFGFCIVGQMEAAVC 79
YN I ++ A +LF EM + P + TYN+LI C+ G+ + A+
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ +E+ + PD T+ L+ K R+ +A + M G P+ + YN L+DG
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++V + +F M Q V W+Y+I+I+G + + L
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLF 417
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 2 GHTRPALQLLRQIQ------GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS 55
G AL L ++++ G S P++ YN++I LC DA ++ E+
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 56 PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNV 115
P TY LI G C +M+ A+ + EM PD I +N L+D K +V EA +
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 116 LAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
M++EG + + TYN L+DG +F + + D ++SI+ C+
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 176 IKMVDEALNLLKH 188
++ A+ L++
Sbjct: 442 EGKLEGAVKLVEE 454
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVT-KRISPTVITYNTLIFGFCIVGQMEAAVC 79
P V N ++ L + + ++ +F ++ KR +YN I GF G ++AA+
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 80 LLNEMVLK------SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
L EM + S PD+ T+N+L+ L G+ K+A V + G +P+ TY
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
L+ G C ++ I+ M PD Y+ +++G K + V EA L +
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 7/188 (3%)
Query: 5 RPALQLLR--QIQGKSAQPNVVMYNTIID---SLCKDKLVNDAYNLFSEMVTKRISPTVI 59
+P L R +++ K +V M NT + S L + +F+ M + T
Sbjct: 574 KPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDL--TSY 631
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
TYN+++ F G + A +L++M D+ T+N ++ L K GR A VL +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
K+G ++V YN+L++ +++ +F+ M + PDV SY+ MI K +
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 180 DEALNLLK 187
EA LK
Sbjct: 752 KEAYKYLK 759
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G + AL + +++ +P+ Y +I CK ++DA ++ EM P I
Sbjct: 302 FGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIV 361
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN L+ G ++ A L +MV + + T+N L+D L + GR + + +
Sbjct: 362 YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLK 421
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K+G+ + +T++ + C ++ + M + D+ + S ++ GF K D
Sbjct: 422 KKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Query: 181 EALNLLKH 188
L+KH
Sbjct: 482 WKEKLMKH 489
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ + A +L Q+ ++ YN II L K + A + + + ++ Y
Sbjct: 644 GYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMY 703
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTLI +++ A L + M INPDV+++NT+++ SK G++KEA L M+
Sbjct: 704 NTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 763
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTK 148
G PN VT ++++D L KE+ K +
Sbjct: 764 AGCLPNHVT-DTILD--YLGKEMEKAR 787
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
MG A +L ++ + ++VMYNT+I++L K +++A LF M + I+P V++
Sbjct: 678 MGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVS 737
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKE---GRVKEAKNV 115
YNT+I G+++ A L M+ P+ +T +T++D L KE R K+A V
Sbjct: 738 YNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGKEMEKARFKKASFV 794
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 88/180 (48%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL L + ++ + P+ YN++ L LV++A + +EM+ P TY +I
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ +G + AV L M + P+ + + +L++ ++ G V+EA +M + G +
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N + SL+ Y V + + + +++ M E PDV + + M++ + +V EA ++
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++L ++ +P Y +I S + L++DA +L+ M + P + Y +LI
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
GF G +E A+ M + + I +L+ A SK G ++EA+ V M P
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+V NS++ + V++ + IFN + + + T DV S++ M+ + + M+DEA+ +
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIFNALRE-KGTCDVISFATMMYLYKGMGMLDEAIEV 746
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 4/192 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPN----VVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
+G P + L G + P +NT+ID K +NDA NLFSEM+ +
Sbjct: 279 VGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPI 338
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+T+NT+I G + A LL +M K I+PD T+N L+ + G ++ A
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYY 398
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+ K G P+ VT+ +++ C K V + + + M + + D S +++ +
Sbjct: 399 RKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNE 458
Query: 177 KMVDEALNLLKH 188
+V +A L +
Sbjct: 459 GLVVQAKALFER 470
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 58 VITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLA 117
V+ YN +I + E A+ L M + PD T+N+L L+ V EA+ +LA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 118 VMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIK 177
M+ G KP TY +++ Y + ++ D++ M + V P+ Y +INGF +
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 178 MVDEALNLLK 187
MV+EA+ +
Sbjct: 635 MVEEAIQYFR 644
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 18 SAQPNVVM-YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
S Q N V+ YN +I + K KL A +LF M + P TYN+L V ++
Sbjct: 509 SGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A +L EM+ P T+ ++ + + G + +A ++ M K G KPN V Y SL++
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
G+ V + F M + V + + +I + K+ ++EA
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A+ L ++ +PN V+Y ++I+ + +V +A F M + I
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+LI + VG +E A + ++M PDV N+++ + G V EA+++ +
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR 717
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
++G +V+++ ++M Y + +++ ++ M + + D S++ ++ + +
Sbjct: 718 EKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLS 776
Query: 181 EALNLLKHPIL 191
E L H +L
Sbjct: 777 ECCELF-HEML 786
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 2/186 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+ R+I+ P+ V + ++ LC+ K+V + + +EM I +
Sbjct: 389 GDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSV 448
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL-AVMI 120
++ + G + A L L + T ++D +++G EA+ V
Sbjct: 449 PVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLAAVIDVYAEKGLWVEAETVFYGKRN 507
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G++ +V+ YN ++ Y K K +F M PD +Y+ + + +VD
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD 567
Query: 181 EALNLL 186
EA +L
Sbjct: 568 EAQRIL 573
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVT-KRISPTVITYNTLIFGFCIVGQMEAAV 78
+P + +Y ++I K +L++ A++ M + P V T+ LI C +G+ +
Sbjct: 176 KPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVK 235
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK-PNVVTYNSLMDG 137
++ EM + +T+NT++D K G +E ++VLA MI++G+ P+V T NS++
Sbjct: 236 SIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGS 295
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
Y + + K + ++ M V PD+ +++I+I F K M
Sbjct: 296 YGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGM 336
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRIS-PTVITYNTLIFGFCIVGQMEAAVCL 80
+ V YNTIID K + + ++ ++M+ S P V T N++I + M
Sbjct: 249 STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESW 308
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+ L + PD+ TFN L+ + K G K+ +V+ M K VTYN +++ +
Sbjct: 309 YSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGK 368
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ K D+F M V P+ +Y ++N + K +V + ++L+
Sbjct: 369 AGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
I+ + P+V N+II S + + + +S + P + T+N LI F G
Sbjct: 277 IEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGM 336
Query: 74 MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNS 133
+ +++ M + + +T+N +++ K GR+++ +V M +G KPN +TY S
Sbjct: 337 YKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCS 396
Query: 134 LMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
L++ Y V K + + +V D ++ +IN +
Sbjct: 397 LVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAY 436
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 82/171 (47%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
QP++ +N +I S K + ++ M + S T +TYN +I F G++E
Sbjct: 318 QPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDD 377
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ +M + + P+ IT+ +LV+A SK G V + +VL ++ + +N +++ Y
Sbjct: 378 VFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYG 437
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
++ K+++ M + + PD +++ MI + + D L K I
Sbjct: 438 QAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITYNTLIF 66
L +L++++ +P+V+ YN+++D L + LVN+ + S M +S +ITYNT++
Sbjct: 197 LMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLN 256
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G + + + + NEMV I PD++++ ++D+L + G VKE+ + M + +P
Sbjct: 257 GMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRP 316
Query: 127 NVVTYNSLMDGYCLVK 142
+V Y +L+D CL K
Sbjct: 317 SVYVYRALID--CLKK 330
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 44 NLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDAL 103
+L E+ + +I N +IF F Q++ + +L EM PDVIT+N+++D L
Sbjct: 163 SLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDIL 222
Query: 104 SKEGRVKEAKNVLAVMIKEGE-KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+ G V E VL+ M ++ N++TYN++++G + I+N M Q + PD
Sbjct: 223 GRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPD 282
Query: 163 VWSYSIMINGFCKIKMVDEALNLL 186
+ SY+ +I+ + V E+L L
Sbjct: 283 LLSYTAVIDSLGRSGNVKESLRLF 306
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
LL++I S +++ N II + + + ++ + EM P VITYN+++
Sbjct: 163 SLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDIL 222
Query: 69 CIVGQMEAAVCLLNEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
G + + +L+ M S++ ++IT+NT+++ + K R + M++ G +P+
Sbjct: 223 GRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPD 282
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+++Y +++D V ++ +F+ M Q ++ P V+ Y +I+ K AL L
Sbjct: 283 LLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 95/185 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L +Q++ + +P+ ++++++DS+ K ++ + ++ EM P+ +
Sbjct: 327 GRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 386
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+LI + G+++ A+ L +EM P+ + ++++ +K G+++ A V M K
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G P TY+ L++ + +V+ I+N+MT + P + SY ++ ++VD
Sbjct: 447 AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDV 506
Query: 182 ALNLL 186
A +L
Sbjct: 507 AGKIL 511
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y II SL K ++ A+ LF +M +++ P+ +++L+ G+++ ++ + EM
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQ 375
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
P F +L+D+ +K G++ A + M K G +PN Y +++ + ++
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
+F M + P +YS ++ VD A+ +
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%)
Query: 11 LRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCI 70
++ Q + + YN ++ L A+ ++ M TY +I
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAK 325
Query: 71 VGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
G+++AA L +M + + P F++LVD++ K GR+ + V M G +P+
Sbjct: 326 SGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATM 385
Query: 131 YNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ SL+D Y +++ +++ M + P+ Y+++I K ++ A+ + K
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G ++++ ++QG +P+ M+ ++IDS K ++ A L+ EM P Y
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I G++E A+ + +M P T++ L++ + G+V A + M
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G +P + +Y SL+ + V+ I M M + DV + +++ + K VD
Sbjct: 482 AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDL 540
Query: 182 ALNLLK 187
AL L+
Sbjct: 541 ALKWLR 546
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 89/166 (53%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+V YN ++ ++ + K + A+ LF EM + ++P TY+TLI F G ++A+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
L +M ++ D++ ++ L++ + +A ++ + + + G P++V YNS+++ Y
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
K + + + M + V P+ SYS +++ + + EAL++
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 92/180 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A L +++ ++ P+ Y+T+I S K+ + + A + +M R+S ++ Y+ LI
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ A+ + + + I PD++ +N++++ K +EA+ ++ M + G P
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N V+Y++L+ Y + + +F M ++ D+ + +IMI+ + ++ MV EA L
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
+ A +L ++ +PNVV YNTI+ + +L +A +LF M K I V+TYNT+
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I + + E A L+ EM + I P+ IT++T++ K G++ A + + G
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTM 154
+ + V Y +++ Y V + K + + +
Sbjct: 467 EIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ + +++ P++V YN++I+ K KL +A L EM + P ++Y+TL+
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ + A+ + EM + D+ T N ++D + VKEA + + K +P
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
NVV+YN+++ Y + + +F M + ++ +V +Y+ MI + K ++A NL+
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 187 K 187
+
Sbjct: 424 Q 424
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
M H + A L++++Q + +PN + Y+TII K ++ A LF ++ + + +
Sbjct: 414 MEHEK-ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y T+I + VG M A LL+E+ L PD I T + L+K GR +EA V
Sbjct: 473 YQTMIVAYERVGLMGHAKRLLHELKL----PDNIPRETAITILAKAGRTEEATWVFRQAF 528
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ GE ++ + +++ Y + ++F M PD ++++N + K + +
Sbjct: 529 ESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFE 588
Query: 181 EA 182
+A
Sbjct: 589 KA 590
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 75/135 (55%)
Query: 53 RISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEA 112
+ +P+V YN ++ Q + A L +EM +++ PD T++TL+ + KEG A
Sbjct: 150 KYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSA 209
Query: 113 KNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
+ L M ++ ++V Y++L++ + + +K IF+ + + +TPD+ +Y+ MIN
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 173 FCKIKMVDEALNLLK 187
+ K K+ EA L+K
Sbjct: 270 YGKAKLFREARLLIK 284
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
N +ID + +V +A LF + I P V++YNT++ + A+ L M
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
K I +V+T+NT++ K ++A N++ M G +PN +TY++++ + ++++
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+F + V D Y MI + ++ ++ A LL
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
++V ++ ++ LC+ K V A LF + + N ++ G+C++G + A
Sbjct: 212 DLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+++ PDV+++ T+++AL+K+G++ +A + M P+V N+++D C
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
K + + ++F +++ P+V +Y+ ++ CKI+ ++ L++
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVE 376
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 27 NTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL 86
N I++ C V++A + +++ + P V++Y T+I G++ A+ L M
Sbjct: 251 NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWD 310
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
NPDV N ++DAL + R+ EA V + ++G PNVVTYNSL+ C ++ +
Sbjct: 311 TRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLC---KIRR 367
Query: 147 TKDIFNTMTQMEV-----TPDVWSYSIMINGFCKIKMVD 180
T+ ++ + +ME+ +P+ ++S ++ + K VD
Sbjct: 368 TEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVD 406
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ A + + I +P+VV Y T+I++L K + A L+ M R +P V
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM- 119
N +I C ++ A+ + E+ K +P+V+T+N+L+ L K R ++ ++ M
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 120 IKEGE-KPNVVTYNSLMDGYCLVKEVN--------------------------------K 146
+K G PN VT++ L+ K+V+ K
Sbjct: 380 LKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++I++ M + + PD +Y+I I+G + EAL+ +
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 24 VMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
++YN I+D L K + + + +F EM + TY L+ + +++ AV +
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER 203
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
I+ D++ F+ L+ L + V+ A+ + +E ++ N +++G+C++
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREF-GCDIKAMNMILNGWCVLGN 262
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
V++ K + + + PDV SY MIN K + +A+ L +
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 95/179 (53%), Gaps = 13/179 (7%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L L RQ+ + + + V YN++ID K L+ A LF M + +I++N++I G
Sbjct: 172 LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEM--KNLISWNSMISG 229
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
+ Q V + +++ D+I++N+++D K GR+++AK + VM + +
Sbjct: 230 Y---AQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----D 282
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
VVT+ +++DGY + V+ K +F+ M DV +Y+ M+ G+ + K EAL +
Sbjct: 283 VVTWATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIF 337
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN V ++D LCKD LV +A LF M K P V+ Y ++ FC ++E A +
Sbjct: 132 PNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRI 188
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+M I P+ ++ LV L + +A + M++ G PNV T+ L+D C
Sbjct: 189 FRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Query: 141 VKEVNKTKDIFNTMTQ 156
VK V + + +T+ Q
Sbjct: 249 VKGVEQAQSAIDTLNQ 264
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A++L ++ K P VV+Y ++++ CK + DA +F +M I+P +Y
Sbjct: 145 GLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSY 204
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G ++ AV +EM+ +P+V TF LVDAL + V++A++ + + +
Sbjct: 205 GVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQ 264
Query: 122 EGEKPNVVTYNSLMD 136
+G NV MD
Sbjct: 265 KGFAVNVKAVKEFMD 279
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 98 TLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM 157
++D L K+G V+EA + +M +G P VV Y ++++ +C ++ K IF M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 158 EVTPDVWSYSIMINGFCKIKMVDEAL 183
+ P+ +SY +++ G M+D+A+
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAV 221
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 41 DAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLV 100
D+ +F +M + P + ++ G C G ++ A+ L M K P+V+ + +V
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 101 DALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVT 160
+A K ++++AK + M G PN +Y L+ G ++ + M + +
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 161 PDVWSYSIMINGFCKIKMVDEALNLL 186
P+V ++ +++ C++K V++A + +
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAI 259
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN V ++D LCKD LV +A LF M K P V+ Y ++ FC ++E A +
Sbjct: 132 PNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRI 188
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+M I P+ ++ LV L + +A + M++ G PNV T+ L+D C
Sbjct: 189 FRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Query: 141 VKEVNKTKDIFNTMTQ 156
VK V + + +T+ Q
Sbjct: 249 VKGVEQAQSAIDTLNQ 264
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A++L ++ K P VV+Y ++++ CK + DA +F +M I+P +Y
Sbjct: 145 GLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSY 204
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G ++ AV +EM+ +P+V TF LVDAL + V++A++ + + +
Sbjct: 205 GVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQ 264
Query: 122 EGEKPNVVTYNSLMD 136
+G NV MD
Sbjct: 265 KGFAVNVKAVKEFMD 279
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 98 TLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM 157
++D L K+G V+EA + +M +G P VV Y ++++ +C ++ K IF M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 158 EVTPDVWSYSIMINGFCKIKMVDEAL 183
+ P+ +SY +++ G M+D+A+
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAV 221
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 41 DAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLV 100
D+ +F +M + P + ++ G C G ++ A+ L M K P+V+ + +V
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 101 DALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVT 160
+A K ++++AK + M G PN +Y L+ G ++ + M + +
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 161 PDVWSYSIMINGFCKIKMVDEALNLL 186
P+V ++ +++ C++K V++A + +
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQSAI 259
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 93/180 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL + ++ P YN++I L ++ ++ D +L + + P V TY ++
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C +AA +++ M + P V +++++ +L K+GRV EA+ A M++ G +P
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ + Y +++ Y +++ ++ + + + P ++Y+++I+GF K+ M+++ L
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQP-NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
GH A+ +L + G + P V +Y ++ CK +A LF M +
Sbjct: 215 GHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVM 274
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y L+ +C M A+ L MV +S D FNTL+ K G + + + + + MI
Sbjct: 275 YTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMI 334
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIF-NTMTQMEVTPDVWSYSIMINGFCKIKMV 179
K+G + NV TY+ ++ YC V+ +F N +++ +V Y+ +I GF K +
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 180 DEALNLL 186
D+A++LL
Sbjct: 395 DKAVDLL 401
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 4/185 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++++ +++ KS PN+ ++NTII C +++AYN M + I P ++TY
Sbjct: 774 GSKSFAMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTY 832
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G +E+A+ L + PD + ++TL+ L R +A ++ M K
Sbjct: 833 TILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQK 889
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN +Y L+ C + + + M +++ P +++ +I C+ K + E
Sbjct: 890 SGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLRE 949
Query: 182 ALNLL 186
A L
Sbjct: 950 ARALF 954
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 83/167 (49%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++ ++ +P V +Y++II SL K V +A F++M+ I P I Y +I
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G+++ A L+ E+V + P T+ L+ K G +++ L M+++G P
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
NVV Y +L+ + + + +F M + ++ D +Y +++G
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGL 732
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+V Y +++ LCK + A+ + M + PTV Y+++I G++ A
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
+M+ I PD I + +++ ++ GR+ EA ++ ++K +P+ TY L+ G+
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+ + K + M + ++P+V Y+ +I F K
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLK 699
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLI--- 65
LL +I K A V + +LC + A + +MV +P +YN++I
Sbjct: 463 SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL 522
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
F I+ + + V ++ E+ PDV T+ +V+ L K+ A ++ M + G +
Sbjct: 523 FQENIIEDLASLVNIIQEL---DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLR 579
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
P V Y+S++ V + ++ F M + + PD +Y IMIN + + +DEA L
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANEL 639
Query: 186 LKHPILYWM 194
++ + +++
Sbjct: 640 VEEVVKHFL 648
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLF-SEMVTKRISPTVITYNTLIFGF 68
+ Q+ K Q NV Y+ +I S CK+ V+ A LF + ++ IS V Y LIFGF
Sbjct: 329 MFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGF 388
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
G M+ AV LL M+ I PD IT+ L+ L K +K A +L ++ G
Sbjct: 389 YKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 50 VTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRV 109
V K I P + +NT+I G+C G+++ A L M + I P+++T+ L+ + + G +
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI 845
Query: 110 KEAKNVLAVMIKEGE--KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS 167
+ A ++ EG +P+ V Y++L+ G C K + M + + P+ SY
Sbjct: 846 ESAIDLF-----EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYE 900
Query: 168 IMINGFCKIKMVDEALNLLK 187
++ C ++ EA+ ++K
Sbjct: 901 KLLQCLCYSRLTMEAVKVVK 920
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+ L +G + +P+ VMY+T++ LC K DA L EM I+P +Y
Sbjct: 843 GDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSY 899
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ C AV ++ +M I P I L+ L +E +++EA+ + A+M++
Sbjct: 900 EKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQ 959
Query: 122 EGE 124
G
Sbjct: 960 SGR 962
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++L ++ +S + + ++NT+I K +++ +FS+M+ K + V TY+ +I
Sbjct: 291 AMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIG 350
Query: 67 GFCIVGQMEAAVCLL-NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
+C G ++ A+ L N + I+ +V + L+ K+G + +A ++L M+ G
Sbjct: 351 SYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIV 410
Query: 126 PNVVTYNSLM 135
P+ +TY L+
Sbjct: 411 PDHITYFVLL 420
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 87/223 (39%), Gaps = 37/223 (16%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+ ++ +P+ Y +I K ++ +M+ +SP V+ Y
Sbjct: 631 GRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLY 690
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
LI F G + + L M I D I + TL+ L + K+ + V+ K
Sbjct: 691 TALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGK 750
Query: 122 E----------------------GEK---------------PNVVTYNSLMDGYCLVKEV 144
E G K PN+ +N+++ GYC +
Sbjct: 751 EKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRL 810
Query: 145 NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ + +M + + P++ +Y+I++ + ++ A++L +
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE 853
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 82/161 (50%)
Query: 28 TIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLK 87
I++ K + +A ++ + + +TY I +C + + A L +EMV K
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
Query: 88 SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
+ V+ ++ ++D K R+ +A ++A M + G KPN+ YNSL+D + ++ +
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 148 KDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ I+ M + +V PD SY+ MI+ + + K ++ + L +
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%)
Query: 24 VMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
V Y I++ C+ + N A LF EMV K V+ Y+ ++ + ++ AV L+ +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
M + P++ +N+L+D + ++ A+ + M + P+ V+Y S++ Y KE
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + +++ D IM+ F K +DE + LL+
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQ 552
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 2 GHTR---PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
G TR A++L+ +++ + +PN+ +YN++ID + + A ++ EM ++ P
Sbjct: 434 GKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDK 493
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
++Y ++I + ++E V L E + D +V SK R+ E +L
Sbjct: 494 VSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQD 553
Query: 119 MIKEGEKPNVVTYNSLMDG 137
M EG + + Y+S ++
Sbjct: 554 MKVEGTRLDARLYSSALNA 572
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 84/185 (45%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL++L +++ K + +Y+ +I + + + V LF E K++
Sbjct: 262 GRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMC 321
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ + G ME + ++ M + +V+ SK+ EA V +K
Sbjct: 322 LKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMK 381
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
E + VTY ++ YC +++ NK + +F+ M + V +YS +++ + K + + +
Sbjct: 382 EECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSD 441
Query: 182 ALNLL 186
A+ L+
Sbjct: 442 AVRLM 446
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK--RISPTVITYNTL 64
A++ Q+ + V +N ++++ K + LF E+ + +I P I+Y L
Sbjct: 121 AMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGIL 180
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I +C G E A+ ++ +M K + I F T++ +L K+G ++ A N+ M+K+G
Sbjct: 181 IKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGC 240
Query: 125 KPNVVTYN-SLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ + YN +M E + K++ M+ M + PD SY+ ++ +C+ M+DEA
Sbjct: 241 ELDNAAYNVRIMSAQKESPE--RVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEA 297
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++++RQ+QGK + + + TI+ SL K + A NL++EMV K Y
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAY 247
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N I E L+ EM + PD I++N L+ A + G + EAK V +
Sbjct: 248 NVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEG 306
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
PN T+ +L+ C + + IF M PD + ++ G + K D+
Sbjct: 307 NNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDD 366
Query: 182 ALNLLK 187
A L++
Sbjct: 367 AKGLIR 372
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
P+ + Y +I S C A + +M K + T I + T++ G++E A L
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEG--RVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
NEMV K D +N + + KE RVKE ++ M G KP+ ++YN LM Y
Sbjct: 232 WNEMVKKGCELDNAAYNVRIMSAQKESPERVKE---LIEEMSSMGLKPDTISYNYLMTAY 288
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
C +++ K ++ + P+ ++ +I C ++ ++ + K +
Sbjct: 289 CERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSV 340
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NV N +++LCK+KLV +A +F ++ + I P ITY T+I GFC VG + A L
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI-KEGEKPNVVTYNSLMDGYCL 140
N M+ + + D+ +++ L K+ + EA V VM+ K G + Y ++D C
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCK 298
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++ + +F+ M + V D +++ +I G + V EA L++
Sbjct: 299 NGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVE 345
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQP-----NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
G AL+L ++ + P N+ +N +++ C +A +F +M + SP
Sbjct: 324 GKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSP 383
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
+++N L+ C + A L EM K++ PD T+ L+D KEG++ E
Sbjct: 384 DTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYY 443
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
M++ +PN+ YN L D +++ K F+ M ++ D +Y ++ +
Sbjct: 444 KTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS-KLKMDDEAYKFIMRALSEA 502
Query: 177 KMVDEALNLL 186
+DE L ++
Sbjct: 503 GRLDEMLKIV 512
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NVV + ++ +LC D DA LF EM + V+++NTL+ G G ME A +
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVF 192
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+ M + DV+++N ++ + ++EAK + M + NVVT+ S++ GYC
Sbjct: 193 DAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRY 244
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+V + +F M + + S++ MI+GF ++ EAL L
Sbjct: 245 GDVREAYRLFCEMPERNIV----SWTAMISGFAWNELYREALMLF 285
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 31/197 (15%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+ N+V N ++ K + +N+A+ LF EM V+++ ++ C G+ E AV
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVE 159
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L +EM + +V+++NTLV L + G +++AK V M +VV++N+++ GY
Sbjct: 160 LFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYI 211
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL----KHPILYWM- 194
+ + K +F M++ V +++ M+ G+C+ V EA L + I+ W
Sbjct: 212 ENDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 195 ---------LYAKAIML 202
LY +A+ML
Sbjct: 268 MISGFAWNELYREALML 284
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
P++++ N+++ K + DAY +F++MV K +++N++I G G + A+
Sbjct: 500 DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALN 555
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE-KPNVVTYNSLMDGY 138
L EM+ P+ +TF ++ A S G + + M + +P + Y S++D
Sbjct: 556 LFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMID-- 613
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
L+ K K+ ++ + TPD Y ++ G C + D+
Sbjct: 614 -LLGRAGKLKEAEEFISALPFTPDHTVYGALL-GLCGLNWRDK 654
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L +++ K V + +I L +++L +A +L S+MV + P TY
Sbjct: 414 GDVSRAFGLFQKLHDKDG----VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTY 469
Query: 62 NTLIFGFCIVGQMEAAV---CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
+ L+ ++ C++ + +PD+I N+LV +K G +++A + A
Sbjct: 470 SVLLSSAGATSNLDQGKHIHCVIAKTT-ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAK 528
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
M+++ + V++NS++ G +K ++F M P+ ++ +++ +
Sbjct: 529 MVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 179 VDEALNLLK 187
+ L L K
Sbjct: 585 ITRGLELFK 593
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A ++ ++ + N +Y + C+ V +A L SEM +SP T+
Sbjct: 318 GDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETF 377
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N LI GF G E + MV + + P FN +V ++SK V A +L I
Sbjct: 378 NCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSID 437
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+ TY+ L+ G+ ++++ +F M +++P + +I G C V+
Sbjct: 438 KGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEA 497
Query: 182 ALNLLK 187
LK
Sbjct: 498 GEKYLK 503
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
++ LL+++ K+ + + Y+ ++ + K+ + A +F EM+ + S Y +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C G ++ A LL+EM ++P TFN L+ ++ G ++ VM+ G P
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ +N ++ ++ VN+ +I PD +YS +I GF + +D+AL L
Sbjct: 408 SCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL- 466
Query: 187 KHPILYWMLYAK 198
Y M Y K
Sbjct: 467 ----FYEMEYRK 474
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
K PN + +I LCK+ + + +L + KR P+VI +L+F ++E
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
++ LL +++K++ D I ++ +V A +KEG + A+ V M++ G N Y +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 137 GYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
C +V + + + + M + V+P +++ +I GF + ++ L
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLE 395
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 71/154 (46%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G L+ + + P+ +N ++ S+ K + VN A + ++ + K P T
Sbjct: 387 FGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT 446
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y+ LI GF ++ A+ L EM + ++P F +L+ L G+V+ + L +M
Sbjct: 447 YSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMK 506
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTM 154
K +PN Y++L+ + + + ++N M
Sbjct: 507 KRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+V+ NT+I K K+ + + ++ + KRI P IT +I C G+++ V LL
Sbjct: 198 SVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLL 257
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+ + K P VI +LV + +E R++E+ ++L ++ + + + Y+ ++ Y
Sbjct: 258 DRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVV--YAKA 315
Query: 142 KEVN--KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
KE + + +F+ M Q + + + Y++ + C+ V EA LL
Sbjct: 316 KEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL 362
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++L + K P+ Y+ +I + ++ A LF EM +++SP + +LI
Sbjct: 428 ANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIV 487
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
G C G++EA L M + I P+ ++ L+ A K G A V MI
Sbjct: 488 GLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%)
Query: 54 ISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAK 113
I P + TYN +I C G ++ ++ EM K I P +F ++D KE + E +
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 114 NVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
V+ +M + G V TYN ++ C K+ + K + + + + P+ +YS++I+GF
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 174 CKIKMVDEALNLLK 187
C + +DEA+NL +
Sbjct: 298 CSEENLDEAMNLFE 311
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P++ YN +I LC+ + +Y++ +EM K I PT ++ +I GF + +
Sbjct: 179 EPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRK 238
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
++ M ++ V T+N ++ L K + EAK ++ ++ +PN VTY+ L+ G+C
Sbjct: 239 VMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFC 298
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPI 190
+ +++ ++F M PD Y +I+ CK + AL L + +
Sbjct: 299 SEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+PN V Y+ +I C ++ +++A NLF MV P Y TLI C G E A+
Sbjct: 284 RPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALI 343
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSL 134
L E + K+ P LV+ L+ +V EAK ++AV +KE NV +N +
Sbjct: 344 LCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAV-VKEKFTRNVDLWNEV 397
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+++R + V YN +I LCK K +A L +++ R+ P +TY+ LI GF
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C ++ A+ L MV PD + TL+ L K G + A + +++ P+
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 129 VTYNSLMDGYCLVKEVNKTKDI 150
L++G +V++ K++
Sbjct: 358 SVMKWLVNGLASRSKVDEAKEL 379
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
+++ K +P + +ID K++ ++ + M + V TYN +I C
Sbjct: 207 EMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRK 266
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
+ A L++ ++ + P+ +T++ L+ E + EA N+ VM+ G KP+ Y
Sbjct: 267 KSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYF 326
Query: 133 SLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVW--SYSIM---INGFCKIKMVDEALNLL 186
+L+ +CL K + + ME W S+S+M +NG VDEA L+
Sbjct: 327 TLI--HCLCKGGDFETALILCRESMEKN---WVPSFSVMKWLVNGLASRSKVDEAKELI 380
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 1/186 (0%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+T+ A L + GK P V Y+ I +LC+ + +A + + +R T
Sbjct: 798 VGNTKDAKSCLDSL-GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYT 856
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y +++ G G ++ A+ +N M P V + +L+ KE ++++ M
Sbjct: 857 YGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKME 916
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
E +P+VVTY +++ GY + +V + + F M + +PD +YS IN C+ +
Sbjct: 917 GESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSE 976
Query: 181 EALNLL 186
+AL LL
Sbjct: 977 DALKLL 982
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+ ++++G+S +P+VV Y +I V +A+N F M + SP TY+ I
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGR 108
C + E A+ LL+EM+ K I P I F T+ L++EG+
Sbjct: 969 LCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + AL+L+R+++ K + + ++ LC+ + DA + M +++ + + Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-Y 401
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINP-DVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+I G+ + A+ E++ KS P V T+ ++ L K + ++ N+ MI
Sbjct: 402 GIIISGYLRQNDVSKALEQF-EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ G +P+ V +++ G+ V + +F++M + + P SYSI + C+ D
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 181 EALNLL 186
E + +
Sbjct: 521 EIIKIF 526
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+L+ +++ ++ + +I K K + +F +M YN +I
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
CI G+ + A+ EM+ K I + T+ L+D ++K +V +++ M++ E
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEH 329
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI-KMVD--EALNL 185
+ L+ +C+ ++ + ++ + E+ D + I++ G C+ +MVD E +++
Sbjct: 330 DAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDI 389
Query: 186 LKHPIL 191
+K L
Sbjct: 390 MKRRKL 395
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 1/182 (0%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + R++ P+ + + LC+ DA + + K P + Y+ I
Sbjct: 769 ATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL-GKIGFPVTVAYSIYIR 827
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C +G++E A+ L + D T+ ++V L + G +++A + + M + G KP
Sbjct: 828 ALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKP 887
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V Y SL+ + K++ K + M P V +Y+ MI G+ + V+EA N
Sbjct: 888 GVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAF 947
Query: 187 KH 188
++
Sbjct: 948 RN 949
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 68/136 (50%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + AL + ++ +P V +Y ++I K+K + +M + P+V+TY
Sbjct: 868 GDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+I G+ +G++E A M + +PD T++ ++ L + + ++A +L+ M+
Sbjct: 928 TAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLD 987
Query: 122 EGEKPNVVTYNSLMDG 137
+G P+ + + ++ G
Sbjct: 988 KGIAPSTINFRTVFYG 1003
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G AL L +G+ + + Y +I+ L + + A + + M P V
Sbjct: 832 IGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHV 891
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y +LI F Q+E + +M +S P V+T+ ++ G+V+EA N M
Sbjct: 892 YTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM 157
+ G P+ TY+ ++ C + K++D +++M
Sbjct: 952 ERGTSPDFKTYSKFINCLC---QACKSEDALKLLSEM 985
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G AL+ +++ K + Y ++D + K + V+ ++ +MV +
Sbjct: 273 GRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAF 332
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ FC+ G+++ A+ L+ E+ K + D F LV L + R+ +A ++ +M +
Sbjct: 333 GYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKR 392
Query: 122 EG-EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+ NV Y ++ GY +V+K + F + + P V +Y+ ++ K+K +
Sbjct: 393 RKLDDSNV--YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 181 EALNLLKHPI 190
+ NL I
Sbjct: 451 KGCNLFNEMI 460
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVITYNTLIFGF 68
L RQ+ +P+V N ++ VNDA +F +M V P TY+ LI G
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
C G+ A LL+EM K P+ ++N+LV+A + G + +A L MI+ G +
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
++Y +L+D C + ++ + + + ++ D SY ++N
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVN 436
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 20 QPNVVMYNTIIDSLC---KDKLVNDAY-----NLFSEMVTKRISPTVITYNTLIFGFCIV 71
+P + Y+ + +L + +N Y +LF +MV I P V N L+ G+ +
Sbjct: 242 RPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLS 301
Query: 72 GQMEAAVCLLNEM-VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
+ A+ + ++M V+ P+ T++ L+ L +GR A+ +L+ M +G PN +
Sbjct: 302 LHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKS 361
Query: 131 YNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
YNSL++ + L E++ M + D SY +++ C+ DEA LL+
Sbjct: 362 YNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
Query: 3 HTRPALQLLRQIQG-KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
H AL++ Q+ +PN Y+ +I LC +A L SEM K P +Y
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSY 362
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+L+ F + G+++ AV L EM+ D I++ TLVD ++G+ EA +L M++
Sbjct: 363 NSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE-MLR 421
Query: 122 EGEKPNVVTYNSLMD 136
E + + +Y+ L++
Sbjct: 422 EKQLVDRDSYDKLVN 436
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 12/177 (6%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR---ISPTVITYNTLIFGFCIVGQ----- 73
N +YN+II K + A N+F MVT + PT+ TY+ L G
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 74 ---MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM-IKEGEKPNVV 129
ME L +MV I PDV N LV V +A + M + +PN
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSF 325
Query: 130 TYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
TY+ L+ G C +++ + M P+ SY+ ++N F +D+A+ L
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCL 382
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 18 SAQPNVVM----YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQ 73
S QP Y+ I L K+ + ++ +++++ R YN++IF F G+
Sbjct: 163 SQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGK 222
Query: 74 MEAAVCLLNEMVLK---SINPDVITFNTLVDALSKEGR--------VKEAKNVLAVMIKE 122
+ AV + MV P + T++ L AL G ++ +++ M+
Sbjct: 223 LIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDS 282
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM-EVTPDVWSYSIMINGFCKIKMVDE 181
G +P+V N L+ GY L VN IF+ M+ + + P+ ++Y +I+G C
Sbjct: 283 GIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTIN 342
Query: 182 ALNLL 186
A LL
Sbjct: 343 ARELL 347
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y+ +I LCK V ++Y EM + ++P V YN LI C + A L +EM
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
++ ++ T+N L+ LS+EG +E+ + M++ G +P+ Y SL++G C ++
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIE 519
Query: 146 KTKDIFNTMTQME---VTPDVWSYSIMINGFCKIKMVDEALNLLK 187
++F + + VT V S ++ C EA LL+
Sbjct: 520 AAMEVFRKCMERDHKTVTRRVLSEFVL--NLCSNGHSGEASQLLR 562
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCK----DKLVNDAYNLFSEMVTKRISPTVITYN 62
A++ L + P + + + +LC+ D L+ AY L S +K + +Y+
Sbjct: 346 AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIK-AYELLS---SKGYFSELQSYS 401
Query: 63 TLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
+I C G++ + L EM + + PDV +N L++A K ++ AK + M E
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
G K N+ TYN L+ E ++ +F+ M + + PD Y +I G CK ++ A
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 183 LNLLK 187
+ + +
Sbjct: 522 MEVFR 526
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 63/115 (54%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R + L++++ + P+V +YN +I++ CK +++ A L+ EM + + TY
Sbjct: 411 GRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTY 470
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVL 116
N LI G+ E ++ L ++M+ + I PD + +L++ L KE +++ A V
Sbjct: 471 NVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 17 KSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEA 76
+ +PN V Y ID CK + +A LF +M TV TLI G +
Sbjct: 239 RGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIK 298
Query: 77 AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMD 136
A L +E+ + + PD +N L+ +L K G V A V+ M ++G +P+ VT++S+
Sbjct: 299 ARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFI 358
Query: 137 GYCLVKE--VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
G KE N + + M + + P + +++ FC V+ L+L K+
Sbjct: 359 GMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKY 412
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
+N ++ + C ++ + +A ++F E + R +P V T N L+ GF G + A +EMV
Sbjct: 179 FNILLRAFCTEREMKEARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+ P+ +T+ +D K+ EA + M + V +L+ G + +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
K + +F+ +++ +TPD +Y+ +++ K V A+ ++K
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMK 339
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 94/189 (49%), Gaps = 5/189 (2%)
Query: 2 GHTRPALQLLRQIQGK-SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G T ++ R+++ + PNV YN ++++ C L+++A ++ EM + + ++
Sbjct: 259 GETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVA 318
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT+I G C ++ A L +M LK I +T+ LV+ K G V V M
Sbjct: 319 YNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMK 378
Query: 121 KEGEKPNVVTYNSLMDGYCLVKE---VNKTKDIF-NTMTQMEVTPDVWSYSIMINGFCKI 176
++G + + +T +L++G C ++ V + DI + + + P Y +++ C+
Sbjct: 379 RKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCED 438
Query: 177 KMVDEALNL 185
+D ALN+
Sbjct: 439 GKMDRALNI 447
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 39/161 (24%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
++V YNT+I LC + V A LF +M K I T +TY L+ G+C G +++ + +
Sbjct: 315 DIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVY 374
Query: 82 NEMVLKSINPDVITFNTLVDALS------------------------------------- 104
EM K D +T LV+ L
Sbjct: 375 REMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKR 434
Query: 105 --KEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
++G++ A N+ A M+ +G KP+ TY + +DGY +V +
Sbjct: 435 LCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ ++R+++ + + N +I + + + ++ Y ++ E +F
Sbjct: 181 AVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE----------------VF 224
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE-GEK 125
G V EA +M+ K I P+ TFN+++ + +EG + + + M +E G
Sbjct: 225 GLDDVSVDEA-----KKMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCS 278
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
PNV +YN LM+ YC +++ + ++ M V D+ +Y+ MI G C
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC 327
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 71.6 bits (174), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+LR +Q + +Y T+I S K V+ + +F +M + + T+ LI G
Sbjct: 489 VLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCA 548
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE--KPN 127
GQ+ A + K++ PD + FN L+ A + G V A +VLA M E P+
Sbjct: 549 RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPD 608
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV--TPDVWSYSIMINGFCKIKMVDEALNL 185
++ +LM C +V + K+++ + + + TP+V Y+I +N K D A ++
Sbjct: 609 HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV--YTIAVNSCSKSGDWDFACSI 666
Query: 186 LK 187
K
Sbjct: 667 YK 668
Score = 60.5 bits (145), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 89/210 (42%), Gaps = 37/210 (17%)
Query: 14 IQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMV--TKRISPTVITYNTLIFGFCIV 71
++ K+ +P+ V++N +I + + V+ A+++ +EM T I P I+ L+ C
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 72 GQMEAA-----------------------------------VCLLNEMVLKSINPDVITF 96
GQ+E A + +M K + PD + F
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 97 NTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ 156
+ L+D + EA +L +G + ++Y+SLM C K+ K +++ +
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 157 MEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++ P + + + +I C+ + +A+ L
Sbjct: 743 IKLRPTISTMNALITALCEGNQLPKAMEYL 772
Score = 55.8 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 66/129 (51%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + + ++ K P+ V ++ +ID K++++A+ + + ++ I I+Y++L+
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMG 722
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
C + A+ L ++ + P + T N L+ AL + ++ +A L + G KP
Sbjct: 723 ACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKP 782
Query: 127 NVVTYNSLM 135
N +TY+ LM
Sbjct: 783 NTITYSMLM 791
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCK-DKLVNDAYNLFSEMVTKRISPTVIT 60
G + + LL + + +Y+ CK + V +A+ F++++ ++PT+ T
Sbjct: 414 GRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFR-FTKLI---LNPTMST 469
Query: 61 YNTLIFGFCIVGQ-MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+N L+ C Q +E A +L + + D + TL+ + +K G+V V M
Sbjct: 470 FNMLM-SVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
G + N+ T+ +L+DG +V K + + V PD ++ +I+ + V
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 180 DEALNLL------KHPI 190
D A ++L HPI
Sbjct: 589 DRAFDVLAEMKAETHPI 605
Score = 50.8 bits (120), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 2 GHTR---PALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
GH + A +L+ + + + + Y++++ + C K A L+ ++ + ++ PT+
Sbjct: 690 GHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTI 749
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
T N LI C Q+ A+ L+E+ + P+ IT++ L+ A ++ + + +L+
Sbjct: 750 STMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQ 809
Query: 119 MIKEGEKPNVV 129
+G PN++
Sbjct: 810 AKGDGVSPNLI 820
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
YNT+ID+ K + +A F M+ + I PT +T+NT+I + GQ+ L+ M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
L PD T+N L+ +K ++ A M +G KP+ V+Y +L+ + + V
Sbjct: 361 LHCA-PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + + M V D ++ S + + + +M++++ + K
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A +L + P+ YNT++ L + + +M I Y +I
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
F +GQ+ A + EMV +I PDV+ + L++A + G V++A + + M + G
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPG 643
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQM---EVTPDVWSYSIMINGFCKIKMVDEA 182
N V YNSL+ Y V +++ + I+ + Q PDV++ + MIN + + MV +A
Sbjct: 644 NSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 26 YNTIIDSLCKDKLVNDAYNLF--SEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
Y+ ID+ + +++A +F + V KR TVI YN +I + I E A L
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKR---TVIEYNVMIKAYGISKSCEKACELFES 530
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
M+ + PD T+NTLV L+ + + L M + G + + Y +++ + + +
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+N ++++ M + + PDV Y ++IN F V +A++ ++
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVE 634
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 104/253 (41%), Gaps = 59/253 (23%)
Query: 3 HTRPALQLLRQIQGKSA-QPNVVMYN---TIIDSLCKDKLVNDAYNLFSEMVTKRISPTV 58
H A+++ + K + NV+ YN I+ CK + V +L+ EM+ K I P
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQ---SLWDEMIRKGIKPIN 222
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVI------------------------ 94
TY TLI + G A+C L +M + PD +
Sbjct: 223 STYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKK 282
Query: 95 -----------------TFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
T+NT++D K G++KEA M++EG P VT+N+++
Sbjct: 283 WSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHI 342
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH--------- 188
Y ++ + + TM ++ PD +Y+I+I+ K ++ A K
Sbjct: 343 YGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPD 401
Query: 189 PILYW-MLYAKAI 200
P+ Y +LYA +I
Sbjct: 402 PVSYRTLLYAFSI 414
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 7/186 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM------VTKRISPTVIT 60
AL L ++ QP+ V ++ K + A F + + + T
Sbjct: 241 ALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYT 300
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YNT+I + GQ++ A M+ + I P +TFNT++ G++ E +++ M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM- 359
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
K P+ TYN L+ + ++ + F M + PD SY ++ F MV+
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 181 EALNLL 186
EA L+
Sbjct: 420 EAEGLI 425
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A ++ +++ + +P+VV+Y +I++ V A + M I +
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSIN----PDVITFNTLVDALSKEGRVKEAKNVL 116
YN+LI + VG ++ A + ++ L+S N PDV T N +++ S+ V++A+ +
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKL-LQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF 706
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
M + GE N T+ ++ Y + I M +M++ D SY+ ++ F
Sbjct: 707 DSMKQRGE-ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALD 765
Query: 177 KMVDEALNLLKH 188
EA+ K
Sbjct: 766 GRFKEAVETFKE 777
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++++ +P+ V Y T++ + +V +A L +EM + T + L
Sbjct: 386 AGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR 445
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ +E + + N ++ +DA + G + EA+ V + +E K
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAERVF-ICCQEVNKR 503
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
V+ YN ++ Y + K K ++F +M VTPD +Y+ ++
Sbjct: 504 TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQ 548
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A + R+++ + +V+ +N+++ + C++ +A L EM + ISP ++T+N LI
Sbjct: 235 ATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+ +G+ +AA+ L+ +M I DV T+ ++ L G +A ++ M G P
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
N VT S + +K +N+ ++ + +M DV + +++ + K +++A
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 39/222 (17%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++L+++++ + P +V +N +I + + A +L +M T I+ V T+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINP------------------------------ 91
+I G G A+ + +M L + P
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 92 -----DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
DV+ N+LVD SK G++++A+ V + + +V T+NS++ GYC K
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV----KNKDVYTWNSMITGYCQAGYCGK 436
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
++F M + P++ +++ MI+G+ K EA++L +
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 40/217 (18%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVIT 60
G+ A +L ++Q + +PN++ +NT+I K+ +A +LF M ++ T
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITF------------------------ 96
+N +I G+ G+ + A+ L +M P+ +T
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 97 -----------NTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
N L D +K G ++ ++ + M E +++T+NSL+ GY L
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM----ETKDIITWNSLIGGYVLHGSYG 607
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+FN M +TP+ + S +I + VDE
Sbjct: 608 PALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R +L R + P+ ++ I+ V + S ++ +S + N++
Sbjct: 163 REVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSI 222
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ + G+++ A M + DVI +N+++ A + G+ +EA ++ M KEG
Sbjct: 223 LAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
P +VT+N L+ GY + + + D+ M +T DV++++ MI+G M +AL+
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 185 LLKHPIL 191
+ + L
Sbjct: 339 MFRKMFL 345
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+V++ N+++D K + DA +F + K V T+N++I G+C G A L
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELF 441
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE-KPNVVTYNSLMDGYCL 140
M ++ P++IT+NT++ K G EA ++ M K+G+ + N T+N ++ GY
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 141 VKEVNKTKDIFNTMTQMEVTPD 162
+ ++ ++F M P+
Sbjct: 502 NGKKDEALELFRKMQFSRFMPN 523
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+ R++ +V +N++I C+ AY LF+ M + P +IT+NT+I G
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 68 FCIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ G A+ L M + + T+N ++ + G+ EA + M P
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 127 NVVTYNSLM 135
N VT SL+
Sbjct: 523 NSVTILSLL 531
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A ++ R++ PN Y+ +I K + D+ L+ EM + ++P + YN+L++
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVY 337
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
+ A+ L+ ++ + + PD +T+N+++ L + G++ A+NVLA MI E P
Sbjct: 338 VLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSP 397
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
V T+++ ++ KT ++ M ++ P ++ +++ K K + AL +
Sbjct: 398 TVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKI 452
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQP-NVVMYNTIIDSLCKDKL-VNDAYNLFSEMVTKRISPTVI 59
GH A + + + K P +V +N I++ C V +A ++ EM I+P
Sbjct: 238 GHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKD 295
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+Y+ +I F VG + ++ L +EM + + P + +N+LV L++E EA ++ +
Sbjct: 296 SYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL 355
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDV 163
+EG KP+ VTYNS++ C +++ +++ TM ++P V
Sbjct: 356 NEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 89/182 (48%), Gaps = 4/182 (2%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G+ +L+L +++ + P + +YN+++ L ++ ++A L ++ + + P +T
Sbjct: 307 VGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVT 366
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN++I C G+++ A +L M+ ++++P V TF+ ++A++ E ++ VL M
Sbjct: 367 YNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLE----VLGQMK 422
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
P T+ ++ K+ I+ M + E+ + Y I G ++
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 181 EA 182
+A
Sbjct: 483 KA 484
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPT-VITYNTLIFGFC-IVGQMEAAV 78
P + ++ +LC+ + A + +K++ P V +N ++ G+C I + A
Sbjct: 222 PYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAK 279
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+ EM I P+ +++ ++ SK G + ++ + M K G P + YNSL+ Y
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV--Y 337
Query: 139 CLVKE--VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
L +E ++ + + + + PD +Y+ MI C+ +D A N+L
Sbjct: 338 VLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVL 387
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+ +++ S ++ +N+++++ K L++DA LF EM + VI+++ LI G
Sbjct: 113 LRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER----NVISWSCLING 168
Query: 68 FCIVGQMEAAVCLLNEMVLKSIN-----PDVITFNTLVDALSKEGRVKEAKNVLAVMIKE 122
+ + G+ + A+ L EM L N P+ T +T++ A + G +++ K V A + K
Sbjct: 169 YVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKY 228
Query: 123 GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ ++V +L+D Y + + K +FN + + DV +YS MI + DE
Sbjct: 229 HVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK---DVKAYSAMICCLAMYGLTDEC 285
Query: 183 LNLL 186
L
Sbjct: 286 FQLF 289
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
++V+ +ID K + A +F+ + +K+ V Y+ +I + G + L
Sbjct: 233 DIVLGTALIDMYAKCGSLERAKRVFNALGSKK---DVKAYSAMICCLAMYGLTDECFQLF 289
Query: 82 NEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE-GEKPNVVTYNSLMDGY- 138
+EM +INP+ +TF ++ A G + E K+ +MI+E G P++ Y ++D Y
Sbjct: 290 SEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYG 349
Query: 139 --CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING---FCKIKMVDEALNLL 186
L+KE + + M + PDV + +++G IK + AL L
Sbjct: 350 RSGLIKEAE------SFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N+V +N+++ L L+ DA L M + I P IT+N+L G+ +G+ E A+ ++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
+M K + P+V+++ + SK G + A V M +EG PN T ++L+
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 100/213 (46%), Gaps = 37/213 (17%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+L R++ N+ +N+I+ S K V+DA L EM + P ++T+N+L+ G
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSG 199
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNV------------ 115
+ G + A+ +L M + + P + ++L+ A+++ G +K K +
Sbjct: 200 YASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYD 259
Query: 116 -------LAVMIKEGEKP------------NVVTYNSLMDGY---CLVKEVNKTKDIFNT 153
+ + IK G P N+V +NSL+ G CL+K+ + +
Sbjct: 260 VYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD---AEALMIR 316
Query: 154 MTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
M + + PD +++ + +G+ + ++AL+++
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVT-KRISPTVIT 60
G A +L ++ + +P V +Y ++ + + L++DA+++ +M + + P V T
Sbjct: 138 GQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFT 197
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM- 119
Y+TL+ Q + L EM + I P+ +T N ++ + GR + + VL+ M
Sbjct: 198 YSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDML 257
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMV 179
+ KP+V T N ++ + + +++ + + + P+ +++I+I + K +M
Sbjct: 258 VSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMY 317
Query: 180 DEALNLLKH 188
D+ +++++
Sbjct: 318 DKMSSVMEY 326
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
QP Y ++ L K N A LF EM+ + + PTV Y L+ + ++ A
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 80 LLNEM-VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+L++M PDV T++TL+ A + ++ M + PN VT N ++ GY
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGY 240
Query: 139 CLVKEVNKTKDIFNTM-TQMEVTPDVWSYSIMINGFCKIKMVD 180
V ++ + + + M PDVW+ +I+++ F + +D
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
QP+V Y+T++ + + +L+ EM + I+P +T N ++ G+ VG+ +
Sbjct: 192 QPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEK 251
Query: 80 LLNEMVLKSI-NPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+L++M++ + PDV T N ++ G++ ++ G +P T+N L+ Y
Sbjct: 252 VLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSY 311
Query: 139 CLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKI 176
+ +K + M ++E +Y+ +I F +
Sbjct: 312 GKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADV 349
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK--RISPTVITYNTL 64
A+++ ++ VV +N ++ + L LF E + I+P I+Y L
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I +C G+ E A+ ++ +M +K + +I F T++ +L K G V EA+++ M+ +G
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 125 KPNVVTYN-SLMDGYCLVKEV-NKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ YN LM+ KE + K++ M+ + + PD SY+ ++ +C M+ EA
Sbjct: 241 DLDNTVYNVRLMNA---AKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEA 297
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 7/187 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++++R ++ K + ++ + TI+ SL K+ LV++A +L+ EMV K Y
Sbjct: 188 GKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVY 247
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N + E L+ EM + PD +++N L+ A +G + EAK V
Sbjct: 248 NVRLMN-AAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY----- 301
Query: 122 EG-EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
EG E+PN T+ +L+ C+ ++ +F + PD + + G K ++
Sbjct: 302 EGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRME 361
Query: 181 EALNLLK 187
+A + +
Sbjct: 362 DARGVAR 368
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+L+ ++ +P+ V YN ++ + C ++++A ++ + P T+ TLIF
Sbjct: 264 ELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE----QPNAATFRTLIFHL 319
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
CI G + + + + + PD T L + L K R+++A+ V A ++K+ P +
Sbjct: 320 CINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGV-ARIVKKKFPPRL 378
Query: 129 VT 130
VT
Sbjct: 379 VT 380
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
LQL QI ++ + ++D K + A N F EM + + +++ LI
Sbjct: 97 GLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHR----SEVSWTALIS 152
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
G+ G+++ A L ++M DV+ +N ++D K G + A+ + M +
Sbjct: 153 GYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEMTHK---- 205
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
V+T+ +++ GYC +K+++ + +F+ M + + S++ MI G+C+ K E + L
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV----SWNTMIGGYCQNKQPQEGIRLF 261
Query: 187 K 187
+
Sbjct: 262 Q 262
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVITYNTLIFGFCI 70
R++ + N+V +NT+I C++K + LF EM T + P +T +++
Sbjct: 227 RKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISD 286
Query: 71 VGQM---EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPN 127
G + E C + K ++ V ++D SK G +++AK + M ++
Sbjct: 287 TGALSLGEWCHCFVQR---KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK----Q 339
Query: 128 VVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
V ++N+++ GY L D+F TM +E PD
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTM-MIEEKPD 373
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+Y TLI C +G+++ A+ L+N+M + F+ +++ L+K+ R++EA V+ +M
Sbjct: 127 SYETLIARLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVELM 186
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME---VTPDVWSYSIMINGFCKI 176
+V +YN + +C +V + + M + E ++PD +Y ++ G CK
Sbjct: 187 RSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACKS 246
Query: 177 KMVDEALNLLKH 188
V+ A+ +L+
Sbjct: 247 GRVEAAMAILRR 258
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNT 63
T A+Q+ + + +P V+ Y ++ +L K KL ++A+ +++ M+ I P + Y T
Sbjct: 474 TTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTT 533
Query: 64 LIFGFCIVGQMEAAV--CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ + GQ + + LL EM K I P V+TFN ++ ++ G A M
Sbjct: 534 M--ASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKS 591
Query: 122 EGEKPNVVTYNSLMDG 137
E +PN +TY L++
Sbjct: 592 ENVEPNEITYEMLIEA 607
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
R ++LL +++ K +P +N ++ + K A +F MV PTVI+Y L
Sbjct: 440 RWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGAL 499
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
+ + A + N M+ I P++ + T+ L+ + + +L M +G
Sbjct: 500 LSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALN 184
+P+VVT+N+++ G + F+ M V P+ +Y ++I EAL
Sbjct: 560 EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLI----------EALA 609
Query: 185 LLKHPILYWMLYAKA 199
P L + L+ KA
Sbjct: 610 NDAKPRLAYELHVKA 624
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 7 ALQLLRQIQGKSAQPN-------VVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVI 59
AL++ + + +PN V +N ++ + K + L ++M K + P
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 60 TYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVM 119
+N ++ + AA+ + MV P VI++ L+ AL K EA V M
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 120 IKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
IK G +PN+ Y ++ ++ N + M + P V +++ +I+G
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISG 572
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 58/116 (50%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+PN+ Y T+ L + N L EM +K I P+V+T+N +I G G A
Sbjct: 525 EPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYE 584
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
+ M +++ P+ IT+ L++AL+ + + + A + EG K + Y++++
Sbjct: 585 WFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+PNV +Y +I L K K A+ LF EM+ + Y L+ + G+ +AA
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 80 LLNEM-VLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
LL M + PDV T++ L+ + + + +++L+ M ++G +PN +TYN+L+D Y
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266
Query: 139 CLVKE-VNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
K V + + + + PD W+ + + F
Sbjct: 267 GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVITYNTLIFGF 68
LL ++ + +PN + YNT+ID+ K K+ + + +M+ + P T N+ + F
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
GQ+E + I P++ TFN L+D+ K G K+ V+ M K +
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
VTYN ++D + ++ + + +F M + P + ++ + + D+ +L+
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR-ISPTVITYNTLI 65
A +L +++ + N +Y ++ + + + A+ L M + P V TY+ LI
Sbjct: 169 AHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILI 228
Query: 66 FGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE- 124
F V + LL++M + I P+ IT+NTL+DA K E ++ L M+ E +
Sbjct: 229 KSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDC 288
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
KP+ T NS + + ++ ++ + + P++ +++I+++ + K
Sbjct: 289 KPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGK 339
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%)
Query: 23 VVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLN 82
+V YN +ID+ + + LF M ++RI P+ +T +L+ + + + +L
Sbjct: 362 IVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Query: 83 EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
+ I D++ FN LVDA + + E K VL +M K+G KP+ +TY +++ Y
Sbjct: 422 FIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
+ Q +PN+ +N ++DS K + M S T++TYN +I F G
Sbjct: 317 KFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAG 376
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
++ L M + I P +T +LV A + + + VL + + ++V +N
Sbjct: 377 DLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFN 436
Query: 133 SLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
L+D Y +++ + K + M + PD +Y M+ +
Sbjct: 437 CLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 92/222 (41%), Gaps = 40/222 (18%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY-------------------- 61
N+ + TI+D+ +DK +A NLFS+M TK + P T+
Sbjct: 302 NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLH 361
Query: 62 ---------------NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKE 106
N L+ + G +E A + M + D++T+NT++ S
Sbjct: 362 GLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR----DIVTWNTMISGCSHH 417
Query: 107 GRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT-MTQMEVTPDVWS 165
G +EA MI GE PN +T+ ++ + V + FN M + +V PD+
Sbjct: 418 GLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQH 477
Query: 166 YSIMINGFCKIKMVDEALNLLKHPILYWMLYAKAIMLTGQFL 207
Y+ ++ K M +A + ++ + W + A +L ++
Sbjct: 478 YTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYV 519
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 24 VMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNE 83
+ Y+TII + L N A F M + P +TY+ ++ + G++E + L
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 84 MVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKE 143
V PD I F+ L + G + VL M KPNVV YN+L++ +
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 144 VNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ +FN M + +TP+ + + ++ + K + +AL L +
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEE 386
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A++ ++ P+ V Y+ I+D K V + +L+ V P I ++ L
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKP 126
F G + +L EM + P+V+ +NTL++A+ + G+ A+++ M++ G P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N T +L+ Y + ++ M + D Y+ ++N I + +EA L
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLF 419
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L L + +P+ + ++ + + + + EM + + P V+ Y
Sbjct: 270 GKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVY 329
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NTL+ G+ A L NEM+ + P+ T LV K ++A + M
Sbjct: 330 NTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ-MEVTPDVWSYSIMINGFCKIKMVD 180
+ + + YN+L++ + + + +FN M + ++ PD +SY+ M+N + +
Sbjct: 390 KKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAE 449
Query: 181 EALNLLKH 188
+A+ L +
Sbjct: 450 KAMELFEE 457
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 4 TRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKD-KLVNDAYNLFSEMVTK-RISPTVITY 61
R ALQL +++ K + ++YNT+++ +C D L +A LF++M + P +Y
Sbjct: 377 ARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSY 435
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ + G+ E A+ L EM+ + +V+ LV L K R+ + V + IK
Sbjct: 436 TAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIK 495
Query: 122 EGEKPN 127
G KP+
Sbjct: 496 RGVKPD 501
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 36/189 (19%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLC----------------------------------- 34
+L++++ +PNVV+YNT+++++
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372
Query: 35 KDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLK-SINPDV 93
K + DA L+ EM K+ I YNTL+ +G E A L N+M PD
Sbjct: 373 KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDN 432
Query: 94 ITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT 153
++ +++ G+ ++A + M+K G + NV+ L+ K ++ +F+
Sbjct: 433 FSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDL 492
Query: 154 MTQMEVTPD 162
+ V PD
Sbjct: 493 SIKRGVKPD 501
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 6 PALQLLRQIQGKSAQ----PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
A++L ++I G+ + NV++ + +ID K ++ A ++S+M + +IT+
Sbjct: 376 AAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMITW 431
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N ++ G+ E AV N+MV K I PD I+F ++ A G V E +N +M K
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Query: 122 E-GEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMIN 171
G KP Y+ ++D L+ ++ N + + E D + +++
Sbjct: 492 SYGIKPGTEHYSCMID---LLGRAGLFEEAENLLERAECRNDASLWGVLLG 539
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEM-VTKRISPTVITYNTLIFGFCI 70
R++ + +P+V+ + ++ + K+ L +A LF M K + P T+ T++
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 71 VGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
+ +++ + +++ I +V+ ++L+D K G V+EA+ V M K N V+
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM----SKKNSVS 333
Query: 131 YNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
+++L+ GYC E K +IF M + ++
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREMEEKDL 362
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 41 DAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVL-KSINPDVITFNTL 99
DA +F EM P VI + ++ F E A+ L M K + PD TF T+
Sbjct: 216 DARRVFDEMP----EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 100 VDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
+ A R+K+ K + +I G NVV +SL+D Y V + + +FN M++
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLLK 187
S+S ++ G+C+ ++A+ + +
Sbjct: 332 V----SWSALLGGYCQNGEHEKAIEIFR 355
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
L +I+ N MYN +I+ + +++ F EM+ +P +T+N L+
Sbjct: 650 HLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLL--- 706
Query: 69 CIVGQMEAAVCLLNEMVLKSINP---DVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
+ G+ + +NE+ L + DVI++NT++ A K + + M +G
Sbjct: 707 DVYGKAK-LFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS 765
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
++ YN+L+D Y K++ K + I M + PD ++Y+IMIN + + +DE ++
Sbjct: 766 VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADV 825
Query: 186 LK 187
LK
Sbjct: 826 LK 827
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+V+ YNTII + K+K + + M S ++ YNTL+ + QME +L
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSIL 791
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
M + PD T+N +++ ++G + E +VL + + G P++ +YN+L+ Y +
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWMLYAKAI 200
V + + M + PD +Y+ ++ ++ DE L +K W L+ K +
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA---LRRNDEFLEAIK-----WSLWMKQM 902
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
+L++++ ++ P+ YN +I+ + +++ ++ E+ + P + +YNTLI +
Sbjct: 790 ILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG 849
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEA 112
I G +E AV L+ EM ++I PD +T+ LV AL + EA
Sbjct: 850 IGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+PNV ++ K+ V +A FS M I Y+++I + + + A
Sbjct: 242 RPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEE 300
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+++ M + + + +++A S++G+++ A+++L M G PN++ YN+L+ GY
Sbjct: 301 VIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYG 360
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEA 182
+ ++ + +F+ + + + PD SY MI G+ + +EA
Sbjct: 361 KIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEA 403
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 75/162 (46%)
Query: 26 YNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMV 85
Y+++I + +L + A + M R+ + + ++ + G+ME A +L M
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 86 LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVN 145
+P++I +NTL+ K +++ A+ + + G +P+ +Y S+++G+
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 146 KTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ K + + + P+ ++ +IN K D A+ ++
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIE 443
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A L++++ P+V+ Y ++I+ C ++DA+ L EM +TY
Sbjct: 179 GDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTY 238
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKS----INPDVITFNTLVDALSKEGRVKEAKNVLA 117
+ ++ G C G ME A+ LL EM + I+P+ +T+ ++ A ++ RV+EA VL
Sbjct: 239 SRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLD 298
Query: 118 VMIKEGEKPNVVTYNSLMDG 137
M G PN VT L+ G
Sbjct: 299 RMGNRGCMPNRVTACVLIQG 318
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
AL +LR+ + + V YN +I +N A L EM + P VITY ++I
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 67 GFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE-- 124
G+C G+++ A L EM + +T++ +++ + K G ++ A +LA M KE
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 125 --KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMING 172
PN VTY ++ +C + V + + + M P+ + ++I G
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 29 IIDSLC-KDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLK 87
I+ +LC + L ++A + + + + YN +I F G + A L+ EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 88 SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
+ PDVIT+ ++++ G++ +A + M K N VTY+ +++G C ++ +
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 148 KDIFNTMTQME----VTPDVWSYSIMINGFCKIKMVDEALNLL 186
++ M + + ++P+ +Y+++I FC+ + V+EAL +L
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVL 297
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 5/178 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKR----ISPT 57
G A +L +++ N V Y+ I++ +CK + A L +EM + ISP
Sbjct: 214 GKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPN 273
Query: 58 VITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDA-LSKEGRVKEAKNVL 116
+TY +I FC ++E A+ +L+ M + P+ +T L+ L + VK ++
Sbjct: 274 AVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLI 333
Query: 117 AVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
++K G ++S +K + + IF M V PD + S + C
Sbjct: 334 DKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELC 391
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%)
Query: 15 QGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQM 74
Q K + + Y T++D + + Y++F M K + +TY +LI G +
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 75 EAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSL 134
+ A+ L EM P V+++ + L +GRV+EA V M++ PN TY L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 135 MDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
M+ + + DIF M ++ V PD + +I+I
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A++L +++ +P VV Y + L D V +A ++ EM+ R+SP TY
Sbjct: 171 GDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTY 230
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G+ E A+ + +M + PD N L+ K G VL M +
Sbjct: 231 TVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKE 290
Query: 122 EG 123
G
Sbjct: 291 NG 292
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%)
Query: 59 ITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAV 118
TY T++ F G++++ + + M K + D +T+ +L+ +S G V A +
Sbjct: 123 FTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEE 182
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
M G +P VV+Y + M V + +++ M + V+P+ +Y++++
Sbjct: 183 MRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Query: 179 VDEALNLL 186
+EAL++
Sbjct: 243 CEEALDIF 250
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+ V Y ++I + V+ A L+ EM PTV++Y + G++E A +
Sbjct: 156 DTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVY 215
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
EM+ ++P+ T+ L++ L G+ +EA ++ M + G +P+ N L+
Sbjct: 216 KEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKF 275
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
E + + M + V V Y I + +K E+ +LL+
Sbjct: 276 GETSFMTRVLVYMKENGV---VLRYPIFVEALETLKAAGESDDLLR 318
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
++ + N I+DS K + A LF EM KR S +++NT+I G+ G++E A CL
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEM-PKRDS---VSWNTMISGYTSCGKLEDAWCL 88
Query: 81 LNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
M + D +F+ L+ ++ R + V ++IK G + NV +SL+D Y
Sbjct: 89 FTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAK 148
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ V + F +++ P+ S++ +I GF +++ + A LL
Sbjct: 149 CERVEDAFEAFKEISE----PNSVSWNALIAGFVQVRDIKTAFWLL 190
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NV + ++++D K + V DA+ F E+ P +++N LI GF V ++ A LL
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEIS----EPNSVSWNALIAGFVQVRDIKTAFWLL 190
Query: 82 NEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
M +K+ + D TF L+ L K V A ++K G + + N+++ Y
Sbjct: 191 GLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYAD 250
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWM 194
V+ K +F+ + + D+ S++ MI GF K ++ + A L +W+
Sbjct: 251 CGSVSDAKRVFDGLGG---SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%)
Query: 16 GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME 75
G+S P + ++ID+ + + DAY LF E K P +T + L+ G+
Sbjct: 697 GESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHR 756
Query: 76 AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
A + + K+I D + +NTL+ A+ + G+++ A + M G ++ TYN+++
Sbjct: 757 EAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI 816
Query: 136 DGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
Y +++K +IF+ + + D Y+ MI + K + EAL+L
Sbjct: 817 SVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF 867
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R A + R K+ + + V YNT+I ++ + + A ++ M T + ++ TY
Sbjct: 753 GKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTY 812
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
NT+I + Q++ A+ + + + D + ++ K G++ EA ++ + M K
Sbjct: 813 NTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQK 872
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKD-IFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
+G KP +YN +M C ++ D + M + D+ +Y +I + +
Sbjct: 873 KGIKPGTPSYN-MMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFA 931
Query: 181 EA 182
EA
Sbjct: 932 EA 933
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 81/187 (43%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G L + +Q + + +YN ++ SL K +L+ EMV + + P TY
Sbjct: 237 GRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTY 296
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ + G E A+ EM P+ +T+++++ K G ++A + M
Sbjct: 297 TLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRS 356
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
+G P+ T +++ Y + K +F M + ++ D ++I + K+ + +
Sbjct: 357 QGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHD 416
Query: 182 ALNLLKH 188
A ++ +
Sbjct: 417 AQSMFEE 423
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 34 CKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDV 93
C D V AY +F +M K ++ +N++I GF G+ E A+ L EM K I PD
Sbjct: 169 CGD--VASAYKVFDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 222
Query: 94 ITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT 153
T +L+ A +K G + K V MIK G N+ + N L+D Y V + K +F+
Sbjct: 223 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 282
Query: 154 MTQMEVTPDVWSYSIM---INGFCKIKMVDEALNLLKH 188
M W+ I+ +NGF K EA+ L K+
Sbjct: 283 MVDKNSVS--WTSLIVGLAVNGFGK-----EAIELFKY 313
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+P+V + N I+ SLC+ AY E+ +T+ LI C G ++ AV
Sbjct: 320 EPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVL 379
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L+E++ K PDV ++N ++ L ++G + +L M + G ++ T+ ++ GYC
Sbjct: 380 YLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYC 439
Query: 140 LVKEVNKTKDIFNTM 154
++ + K I N M
Sbjct: 440 KARQFEEAKRIVNKM 454
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%)
Query: 40 NDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTL 99
D +L S + + P V N ++ C E A + E+ D +TF L
Sbjct: 305 QDFEDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGIL 364
Query: 100 VDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
+ EG +K A L+ ++ +G KP+V +YN+++ G T I + M + +
Sbjct: 365 IGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGM 424
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWMLYAKAI 200
+ ++ IM+ G+CK + +EA ++ Y ++ A +
Sbjct: 425 MLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKV 465
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + A ++++++G+ +YN +I LC +K + A+ + EM+ K+ P++ +
Sbjct: 717 LGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGS 776
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
LI C + A L + I+ + + L+ LS G++ +A+N L +M+
Sbjct: 777 CLMLIPRLCRANKAGTAFNLAEQ-----IDSSYVHY-ALIKGLSLAGKMLDAENQLRIML 830
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
G YN + GYC K +++ M + + V SY + C
Sbjct: 831 SNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMC 884
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A+ LL + + P Y+++I+ L + ++ A + +EMV +SP++ T+
Sbjct: 1062 GNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTW 1121
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+ L+ FC Q+ + L+ MV +P F T++D E +A ++ +M K
Sbjct: 1122 SGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQK 1181
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKT 147
G + + T+ SL+ KE T
Sbjct: 1182 CGYEVDFETHWSLISNMSSSKEKKTT 1207
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
L+ L + K +PN + SLC + V A +L+ M +K + T I
Sbjct: 964 LRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVE 1023
Query: 68 FCIV-GQMEAAVCLLNEMVLKSI-NPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
I G++ A L + + P+ ++ ++ LS G + A ++L M+K
Sbjct: 1024 TLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSI 1080
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNL 185
P +Y+S+++G +++K D M ++ ++P + ++S +++ FC+ V E+ L
Sbjct: 1081 PGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERL 1140
Query: 186 LK 187
+K
Sbjct: 1141 IK 1142
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 29 IIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS 88
+ D+L KD ++A LFS++ K P V+ + ++ + GQ + + + M+
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 89 INPDVITFNTLVDALSKEGRV-KEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKT 147
++P+ T++ L+ L+ +G+ K+AK L M+ G PN TY ++ + + +
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 148 KDIFNTMTQMEVTPD 162
+++ M PD
Sbjct: 323 RELLQEMKGKGFVPD 337
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G T AL+L QI+ K+ P+VV + I+++ + +F M+ +SP TY
Sbjct: 211 GRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTY 270
Query: 62 NTLIFGFCIVGQMEA-AVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ LI G G+ A L EM+ ++P+ T+ + +A +EG+ + A+ +L M
Sbjct: 271 SVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMK 330
Query: 121 KEGEKPN 127
+G P+
Sbjct: 331 GKGFVPD 337
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 99 LVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQME 158
+ DALSK+GR EA + + + + P+VV + ++++ Y + +T +F M
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 159 VTPDVWSYSIMINGFC 174
V+P+ ++YS++I G
Sbjct: 263 VSPNAYTYSVLIKGLA 278
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 90/186 (48%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + A++ ++ +P+ V +ID+ + V+ A +L+ T++ +T+
Sbjct: 224 GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF 283
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
+TLI + + G + + + EM + P+++ +N L+D++ + R +AK + +I
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT 343
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
G PN TY +L+ Y + + I+ M + ++ V Y+ +++ + VDE
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDE 403
Query: 182 ALNLLK 187
A + +
Sbjct: 404 AFEIFQ 409
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCL 80
PN Y ++ + + + +DA ++ EM K +S TVI YNTL+ ++ A +
Sbjct: 348 PNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEI 407
Query: 81 LNEMV-LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+M ++ +PD TF++L+ + GRV EA+ L M + G +P + S++ Y
Sbjct: 408 FQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYG 467
Query: 140 LVKEVNKTKDIFNTMTQMEVTPD 162
K+V+ F+ + ++ +TPD
Sbjct: 468 KAKQVDDVVRTFDQVLELGITPD 490
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+L ++ + +P+ + TII ++ + A F +M + P +T +I +
Sbjct: 196 KLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAY 255
Query: 69 CIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNV 128
G ++ A+ L + + D +TF+TL+ G N+ M G KPN+
Sbjct: 256 GRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 315
Query: 129 VTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
V YN L+D K + K I+ + TP+ +Y+ ++ + + + D+AL + +
Sbjct: 316 VIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYRE 375
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 18 SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAA 77
S Q ++ + +++ K ++DA F MV + V+++N +I GF G+ A
Sbjct: 271 SYQFDIPVATALLNMYAKSNHLSDARECFESMVVR----NVVSWNAMIVGFAQNGEGREA 326
Query: 78 VCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
+ L +M+L+++ PD +TF +++ + +K + E K V A++ K+G + NSL+
Sbjct: 327 MRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
Y +++ F+++ + PD+ S++ +I +E+L + +
Sbjct: 387 YSRNGNLSEALLCFHSIRE----PDLVSWTSVIGALASHGFAEESLQMFE 432
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 48/207 (23%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N+ + N ++D K ++++A +FS M K V+++N ++ G+ +G+ E AV L
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVK----DVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY---------- 131
+M + I DV+T++ + ++ G EA V M+ G KPN VT
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 132 --------------------------------NSLMDGYCLVKEVNKTKDIFNTMTQMEV 159
N L+D Y K+V+ + +F++++ E
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE- 437
Query: 160 TPDVWSYSIMINGFCKIKMVDEALNLL 186
DV ++++MI G+ + ++AL LL
Sbjct: 438 -RDVVTWTVMIGGYSQHGDANKALELL 463
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITYNTLI-----FGFCIVGQME 75
+VV +N+II+S K A +FS M + P IT ++ G +G+
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 76 AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
+ +EM+ ++ N LVD +K G + EA V + M +VV++N+++
Sbjct: 252 HCFAVTSEMI-----QNMFVGNCLVDMYAKCGMMDEANTVFSNM----SVKDVVSWNAMV 302
Query: 136 DGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
GY + +F M + ++ DV ++S I+G+ + + EAL + +
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N VMYN+++ L ++ DA LF M +S + +I G G + A+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS-----WAAMIKGLAQNGLAKEAIECF 258
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
EM ++ + D F +++ A G + E K + A +I+ + ++ ++L+D YC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
K ++ K +F+ M Q V S++ M+ G+ + +EA+ +
Sbjct: 319 KCLHYAKTVFDRMKQKNVV----SWTAMVVGYGQTGRAEEAVKIF 359
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 5/186 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A+++ +Q P+ I + + + + +T + V
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
N+L+ + G ++ + L NEM ++ D +++ +V A ++ GR E + M++
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMT-QMEVTPDVWSYSIMINGFCKIKMVD 180
G KP+ VT ++ V K + F MT + + P + YS MI+ F + ++
Sbjct: 466 HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLE 525
Query: 181 EALNLL 186
EA+ +
Sbjct: 526 EAMRFI 531
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 9/185 (4%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
Q ++ + + +ID CK K ++ A +F M K V+++ ++ G+ G+ E AV
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVK 357
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
+ +M I+PD T + A + ++E I G V NSL+ Y
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILYWMLYAKA 199
+++ + +FN M D S++ M++ + + E + L + + L
Sbjct: 418 KCGDIDDSTRLFNEMN----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH-GLKPDG 472
Query: 200 IMLTG 204
+ LTG
Sbjct: 473 VTLTG 477
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
R++ + QPN+ +N ++ + K L+++ + F ++ + +T+N LI G+ +
Sbjct: 61 RRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLS 116
Query: 72 GQMEAAVCLLNEMVLK-SINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
G + AAV N M+ S N +T T++ S G V K + +IK G + ++
Sbjct: 117 GLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 176
Query: 131 YNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ L+ Y V ++ K +F + Y+ ++ G M+++AL L +
Sbjct: 177 GSPLLYMYANVGCISDAKKVFYGLDDRNTV----MYNSLMGGLLACGMIEDALQLFR 229
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTK-RISPTVITYNTLI 65
A +L RQ + +P V N II ++ + K +++ +LF + I P V++YN +I
Sbjct: 164 ASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQII 223
Query: 66 FGFCIVGQMEAAVCLLNEMVLKS-INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
C G ++ A+ + ++ + P +T+ L L + GR+ +A ++L M+ +G+
Sbjct: 224 NAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQ 283
Query: 125 KPNVVTYNSLMDGYCLVKEVNKTKDIFNTM 154
+ YN+L+ GY + + +K + F+ +
Sbjct: 284 AADSTVYNNLIRGYLDLGDFDKAVEFFDEL 313
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 2 GHTRPALQLLRQIQGKSA-QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G+ AL++ R I + P+ V Y + L + + DA +L EM++K +
Sbjct: 230 GNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTV 289
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
YN LI G+ +G + AV +E+ K D I T ++ ++G KEA ++
Sbjct: 290 YNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLL 349
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYS-----IMINGFCK 175
+ + + T N L++ + + ++ +FN M P++ S + IM+N K
Sbjct: 350 DKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFK 409
Query: 176 IKMVDEALNLLK 187
+ EA+N K
Sbjct: 410 MGEFSEAINTFK 421
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVM----YNTIIDSLCKDKLVNDAYNLFSEMVTKRISP 56
MG A+ +++ K VM Y I+ C+ ++ +A F+E V++ +
Sbjct: 410 MGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPA 469
Query: 57 TVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVIT-FNTLV-DALSKEGRVKEAKN 114
++ +I + +++ AV +L+ MV +N V+ F V L K G++ E+
Sbjct: 470 DAPSHRAMIDAYLKAERIDDAVKMLDRMV--DVNLRVVADFGARVFGELIKNGKLTESAE 527
Query: 115 VLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
VL M + KP+ Y+ ++ G C +++ KDI M + V +I F
Sbjct: 528 VLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFE 587
Query: 175 KI---KMVDEALNLLKHPI 190
K + +++ LN + P+
Sbjct: 588 KAGRREEIEKILNSVARPV 606
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Query: 30 IDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS- 88
+ SL + ++ A L + V PTV T N +I + ++ L +S
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 89 INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE-KPNVVTYNSLMDGYCLVKEVNKT 147
I P+V+++N +++A EG V EA V ++ P+ VTY L G +
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 148 KDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+ M D Y+ +I G+ + D+A+
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFF 310
Score = 47.0 bits (110), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 13/196 (6%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNT-----IIDSLCKDKLVNDAYNLFSEMVTKRIS- 55
G A L ++ A PN++ N+ +++ K ++A N F ++ +K S
Sbjct: 371 GKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSK 430
Query: 56 PTVITY---NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEA 112
P V+ Y ++ FC G + A E V +S+ D + ++DA K R+ +A
Sbjct: 431 PFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDA 490
Query: 113 KNVLAVMIKEGEKPNVVTYNSLMDGYCLVK--EVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
+L M+ + V + + + G L+K ++ ++ ++ M + E PD Y +++
Sbjct: 491 VKMLDRMVDVNLRV-VADFGARVFGE-LIKNGKLTESAEVLTKMGEREPKPDPSIYDVVV 548
Query: 171 NGFCKIKMVDEALNLL 186
G C +D+A +++
Sbjct: 549 RGLCDGDALDQAKDIV 564
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 34 CKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDV 93
C D V AY +F +M K ++ +N++I GF G+ E A+ L EM K I PD
Sbjct: 36 CGD--VASAYKVFDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 89
Query: 94 ITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNT 153
T +L+ A +K G + K V MIK G N+ + N L+D Y V + K +F+
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 149
Query: 154 MTQMEVTPDVWSYSIM---INGFCKIKMVDEALNLLKH 188
M W+ I+ +NGF K EA+ L K+
Sbjct: 150 MVDKNSVS--WTSLIVGLAVNGFGK-----EAIELFKY 180
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 5 RPALQLLRQIQGKSAQPNVVMYNTIIDSLCK-------DKLVNDAYNLFSEMVTKRISPT 57
+ A ++++ ++ P++ +N+++ LC+ LV +A N+ EM + +I PT
Sbjct: 225 KEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPT 284
Query: 58 VITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLA 117
++YN L+ ++ + +L +M +PD ++ +V L GR + ++
Sbjct: 285 SMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVD 344
Query: 118 VMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
MI+ G +P Y L+ C V+ VN +F M + V Y ++I CK
Sbjct: 345 EMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCK 402
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
GH + AL ++ + + + +Y +++ + V +A + +M + I+P + +
Sbjct: 187 GHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCF 246
Query: 62 NTLIFGFC-------IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKN 114
N+L+ C G + A+ ++ EM I P +++N L+ L + RV+E+
Sbjct: 247 NSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQ 306
Query: 115 VLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFC 174
+L M + G P+ +Y ++ L K I + M + P+ Y +I C
Sbjct: 307 ILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLC 366
Query: 175 KIKMVDEALNLLK 187
++ V+ AL L +
Sbjct: 367 GVERVNFALQLFE 379
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 10 LLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFC 69
LLR I ++ N+++ +++D K ++ A ++F +M + +TY+ +I G
Sbjct: 260 LLRNI----SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR----NNLTYSAMISGLA 311
Query: 70 IVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE-KPNV 128
+ G+ E+A+ + ++M+ + + PD + + ++++A S G VKE + V A M+KEG+ +P
Sbjct: 312 LHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA 371
Query: 129 VTYNSLMD 136
Y L+D
Sbjct: 372 EHYGCLVD 379
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 56 PTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNV 115
P +NT+I G+ V E A+C NEM+ + PD T+ L+ A ++ ++E K +
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQI 154
Query: 116 LAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCK 175
+ K G + +V NSL++ Y E+ + +F + + S+S M++
Sbjct: 155 HGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLE----SKTAASWSSMVSARAG 210
Query: 176 IKMVDEALNLLK 187
+ M E L L +
Sbjct: 211 MGMWSECLLLFR 222
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
Query: 29 IIDSLCKDKLVNDAYNLFSEM-VTKRISPTVITYNTLIFGFCIVG-QMEAAVCLLNEMVL 86
++ LC + + A L EM + K + ++T+ ++I G C+ E +L M
Sbjct: 216 VVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLMEK 274
Query: 87 KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNK 146
+S+ D+ ++ L+D + G+V+EA+ ++ +M + + YN +M+GY V K
Sbjct: 275 ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEK 334
Query: 147 TKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
++++ M+ VTP+ +Y +++NG CK V EA++ L
Sbjct: 335 VIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNE 376
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G A +L+ + K + +YN I++ + LV L+SEM ++ ++P TY
Sbjct: 295 GKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTY 354
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ G C G++ A+ LNE+ + D ++TL + + G + ++ V+A MI+
Sbjct: 355 WVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIR 414
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTK 148
+G P L D + EVN+ +
Sbjct: 415 DGFIPGATICERLADS---LFEVNRKE 438
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 1/190 (0%)
Query: 2 GHTRPALQLLRQIQ-GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G A +L+ ++ K + N+V + ++I K + + M + + + +
Sbjct: 224 GEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDS 283
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
Y LI GF G++E A L+ M K + + +N +++ S+ G V++ + + M
Sbjct: 284 YKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMS 343
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVD 180
G PN TY LM+G C +V + N + E D YS + ++ M+D
Sbjct: 344 SRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMID 403
Query: 181 EALNLLKHPI 190
++L ++ I
Sbjct: 404 KSLEVVAEMI 413
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
R++ + P+V +Y +I + + DA NLF EM + V+++N++I G
Sbjct: 55 REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNSMISGCVEC 110
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
G M AV L +EM +S V+++ +V+ + G+V +A+ + M + +
Sbjct: 111 GDMNTAVKLFDEMPERS----VVSWTAMVNGCFRSGKVDQAERLFYQM----PVKDTAAW 162
Query: 132 NSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
NS++ GY +V+ +F M V S++ MI G + + EAL+L K
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVI----SWTTMICGLDQNERSGEALDLFK 214
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
QI + + + V+YN ++ + L +DA +F M + V+T+N+LI
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKV 316
Query: 73 QMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYN 132
++ L +M + I T T++ A S+ + K + A ++K EKP+V N
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 133 SLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKHPILY 192
SLMD Y EV ++ +F+ M +T D+ S++IM+N + ++E +NL +
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDVM----LTKDLASWNIMLNCYAINGNIEEVINLFE----- 427
Query: 193 WML 195
WM+
Sbjct: 428 WMI 430
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
R++ ++ NVV +N++I L K V++ +NLF +M + I + T T++ V
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
+ + +++ PDV N+L+D K G V+ ++ V VM+ + ++ ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK----DLASW 406
Query: 132 NSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
N +++ Y + + + ++F M + V PD ++ +++G + + L+L +
Sbjct: 407 NIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFER 463
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 3 HTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYN 62
H P +Q Q S V + + I+ L ++ + +A FS+M + P IT+
Sbjct: 20 HANPKIQRHNQ----STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFI 75
Query: 63 TLIFGFC--IVGQMEAAVCLLNEMVLK-SINPDVITFNT-LVDALSKEGRVKEAKNVLAV 118
L+ G C EA LL+ K ++ + + T ++ SK GR K+A+ V
Sbjct: 76 ALLSG-CGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDY 134
Query: 119 MIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKM 178
M E N VT+N+++DGY +V+ +F+ M + D+ S++ MINGF K
Sbjct: 135 M----EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGY 186
Query: 179 VDEAL 183
+EAL
Sbjct: 187 QEEAL 191
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N V +NT+ID + V++A +F +M + + I++ +I GF G E A+
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDL----ISWTAMINGFVKKGYQEEALLWF 194
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
EM + + PD + ++A + G + V ++ + K NV NSL+D YC
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
V + +F M + V S++ +I GF E+L
Sbjct: 255 GCVEFARQVFYNMEKRTVV----SWNSVIVGFAANGNAHESL 292
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G L + R + + + NV + N++ID C+ V A +F M + TV++
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR----TVVS 274
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+N++I GF G ++ +M K PD +TF + A S G V+E +M
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 121 KEGE-KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+ P + Y L+D L + +D + M + P+
Sbjct: 335 CDYRISPRIEHYGCLVD---LYSRAGRLEDALKLVQSMPMKPN 374
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 42 AYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVD 101
A+ +F M + SP +N+LI G+ +GQ E A+ L +M + PD TF ++
Sbjct: 146 AHEVFDRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 102 ALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTP 161
A G V+ + + ++KEG +V N+L+ Y ++ K +++F+ +
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH----K 259
Query: 162 DVWSYSIMINGFCKIKMVDEALNLLK 187
D S++ M+ G+ ++ EAL++ +
Sbjct: 260 DYVSWNSMLTGYLHHGLLHEALDIFR 285
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G+ A ++ ++ + + P +N++I + DA L+ +M + P T+
Sbjct: 141 GYAEVAHEVFDRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTF 198
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
++ +G ++ + ++V + DV N LV +K G + +A+NV ++
Sbjct: 199 PRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH 258
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPD 162
+ + V++NS++ GY +++ DIF M Q + PD
Sbjct: 259 K----DYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVND-AYNLFSEMVTKRISPTVIT 60
GH+ AL+L Q++ + + N +++ + S C D + + L +V
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSAL-STCADVVALELGKQLHGRLVKGGYETGCFV 446
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
N L+ +C G +E A L EM K D++++NT++ S+ G + A M
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 121 KEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ-MEVTPDVWSYSIMINGFCKIKMV 179
+EG KP+ T +++ V+K + F TMTQ V P+ Y+ M++ + ++
Sbjct: 503 REGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLL 562
Query: 180 DEALNLLKH 188
++A NL+K+
Sbjct: 563 EDAHNLMKN 571
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 87/166 (52%), Gaps = 18/166 (10%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
+V +NT++ ++ V+DA ++F M K +++N L+ + +ME A
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEAC--- 208
Query: 82 NEMVLKSI-NPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
M+ KS N ++++N L+ K+ ++ EA+ M +VV++N+++ GY
Sbjct: 209 --MLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM----NVRDVVSWNTIITGYAQ 262
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++++ + +F+ DV++++ M++G+ + +MV+EA L
Sbjct: 263 SGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPT--VITYNTLIFGFCIVGQMEAAVC 79
+VV +NTII + +++A LF E SP V T+ ++ G+ +E A
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDE------SPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
L ++M + + +++N ++ + R++ AK + VM NV T+N+++ GY
Sbjct: 303 LFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYA 354
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
++++ K++F+ M + D S++ MI G+ + EAL L
Sbjct: 355 QCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLF 397
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 5/191 (2%)
Query: 2 GHTRPALQLL----RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPT 57
G P L L+ R+ + + +Y+ I SL ++A + M P
Sbjct: 345 GSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPD 404
Query: 58 VITYNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLA 117
ITY+ L+FG C ++E A +L++M + PD+ T+ L+ K + +A A
Sbjct: 405 NITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFA 464
Query: 118 VMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ-MEVTPDVWSYSIMINGFCKI 176
M+++G + + L+DG+ + + M + V P +Y ++I+ KI
Sbjct: 465 NMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKI 524
Query: 177 KMVDEALNLLK 187
K +EAL+LL+
Sbjct: 525 KKSEEALDLLQ 535
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G A ++ + ++ +P+ + Y+ ++ LCK K + +A + +M + P + T
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKT 442
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+ LI G C +++ A+ M+ K + D + L+D + + A L M+
Sbjct: 443 WTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMV 502
Query: 121 KEGE-KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF-CKIKM 178
K KP TY L+D +K+ + D+ M + +Y+ +G+ K
Sbjct: 503 KNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP----AYAEAFDGYLAKFGT 558
Query: 179 VDEALNLL 186
+++A L
Sbjct: 559 LEDAKKFL 566
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 19 AQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG------ 72
++ N+V YNT +D C++ A+ L SE+ + + + T+ +L+ G VG
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 73 QMEAAVCLL----NEMVLKSI---------------------NPDVITFNTLVDALSKEG 107
Q+ + V L N+ V ++ N +VI++ +++ +K G
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 108 RVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQ-MEVTPDVWSY 166
MI+EG KPN VTY +++ V V++ FN+M + ++ P + Y
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 167 SIMINGFCKIKMVDEALNLL-----KHPILYWMLYAKA 199
+ M++ C+ ++ +A + + +L W + A
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G + AL+L +Q + PNV+ +N II SL ++ V++A ++F +M + I P +I++
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
T++ G G E A+ L +M + P+ + + A + + + + +I+
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR 574
Query: 122 EGEKPNVVTYN-SLMDGYCLVKEVNKTKDIFNT 153
+ ++V+ SL+D Y ++NK + +F +
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG------------ 67
+ +VV +N II + LV DA + M +++ +T TL+
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 68 ---FCIVGQMEAAVCLLN---EMVLK-------------SINPDVITFNTLVDALSKEGR 108
+CI E+ + L + +M K ++ D+I +NTL+ A ++ G
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 109 VKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSI 168
EA + M EG PNV+T+N ++ +V++ KD+F M + P++ S++
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 169 MINGFCKIKMVDEALNLLK 187
M+NG + +EA+ L+
Sbjct: 517 MMNGMVQNGCSEEAILFLR 535
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 65/119 (54%)
Query: 12 RQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIV 71
+++ + + +++++NT++ + + L +A LF M + + P VIT+N +I
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 72 GQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
GQ++ A + +M I P++I++ T+++ + + G +EA L M + G +PN +
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
++ + NTII K + DA+ FSE+ K VI+YN+LI G + + E + L
Sbjct: 342 DLTVQNTIISFYAKYGSLCDAFRQFSEIGLK----DVISYNSLITGCVVNCRPEESFRLF 397
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
+EM I PD+ T ++ A S + + + G N N+LMD Y
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
+++ K +F+TM + D+ S++ M+ GF + EAL+L
Sbjct: 458 GKLDVAKRVFDTMHKR----DIVSWNTMLFGFGIHGLGKEALSLF 498
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
N + N ++D K ++ A +F M + I +++NT++FGF I G + A+ L
Sbjct: 443 NTSICNALMDMYTKCGKLDVAKRVFDTMHKRDI----VSWNTMLFGFGIHGLGKEALSLF 498
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK--PNVVTYNSLMDGYC 139
N M +NPD +T ++ A S G V E K + M + P + YN + D
Sbjct: 499 NSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTD--- 555
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDV 163
L+ + ++ + +M PD+
Sbjct: 556 LLARAGYLDEAYDFVNKMPFEPDI 579
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NV + N++I CK K V+ A ++F ++ ++ T++++N +I GF G+ A+
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYF 426
Query: 82 NEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLV 141
++M +++ PD T+ +++ A+++ AK + V+++ NV +L+D Y
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 142 KEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+ + IF+ M++ VT +++ MI+G+ AL L +
Sbjct: 487 GAIMIARLIFDMMSERHVT----TWNAMIDGYGTHGFGKAALELFE 528
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 29 IIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLLNEMVLKS 88
++ C+ V++A +F + +K + Y+T++ GF V ++ A+ M
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSK----LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD 130
Query: 89 INPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCLVKEVNKTK 148
+ P V F L+ E ++ K + +++K G ++ L + Y ++VN+ +
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 149 DIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
+F+ M + D+ S++ ++ G+ + M AL ++K
Sbjct: 191 KVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVK 225
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 16 GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME 75
GK +V +N +I ++ DA N FS+M ++ + P TY ++I +
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 76 AAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLM 135
A + ++ ++ +V LVD +K G + A+ + +M + +V T+N+++
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM----SERHVTTWNAMI 511
Query: 136 DGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
DGY ++F M + + P+ ++ +I+ +V+ L
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 7 ALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIF 66
A+ + R I ++ +V +N +ID A LF EM I P +T+ ++I
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 67 GFCIVGQMEAAV-CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEK 125
G +EA + C SI + + +VD L + GR+ EA + + M K
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPV---K 604
Query: 126 PNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMI 170
P V Y +++ + K VN + + E+ PD Y +++
Sbjct: 605 PAVNVYGAMLGACQIHKNVNFAEKAAERL--FELNPDDGGYHVLL 647
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Query: 2 GHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITY 61
G R AL++++ + ++ +P+ + +++ ++ +L++ + + V
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 62 NTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIK 121
L+ + G +E A L + M+ + +V+++N+++DA + KEA + M+
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 122 EGEKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDE 181
EG KP V+ + + ++ + + I ++ + +V + +I+ +CK K VD
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 182 ALNLL 186
A ++
Sbjct: 391 AASMF 395
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 19 AQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMV-TKRISPTVITYNTLIFGFCIVGQMEAA 77
++ N+V + T++ D N A L+ M+ ++ + Y+ ++ +VG ++
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 78 VCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDG 137
+ + + +++ DV+ N++VD K GR+ EA + KE +P+ ++N+L+ G
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSF----KEILRPSSTSWNTLISG 182
Query: 138 YCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
YC +++ +F+ M Q P+V S++ +I+GF
Sbjct: 183 YCKAGLMDEAVTLFHRMPQ----PNVVSWNCLISGF 214
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 1 MGHTRPALQLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
+G + + + +I ++ + +VV+ N+++D K+ + +A + F E+ + P+ +
Sbjct: 120 VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI----LRPSSTS 175
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMI 120
+NTLI G+C G M+ AV L + M P+V+++N L+ +G + A L M
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMP----QPNVVSWNCLISGFVDKGSPR-ALEFLVRMQ 230
Query: 121 KEG 123
+EG
Sbjct: 231 REG 233
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 22 NVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVCLL 81
NV + N +I +L++DA+ +F EM + I +T+ T++ G+ G+ A+ L
Sbjct: 39 NVFIANNVISMYVDFRLLSDAHKVFDEMSERNI----VTWTTMVSGYTSDGKPNKAIELY 94
Query: 82 NEMV-LKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYCL 140
M+ + + ++ ++ A G ++ V + KE + +VV NS++D Y
Sbjct: 95 RRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVK 154
Query: 141 VKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLKH 188
+ + F + + P S++ +I+G+CK ++DEA+ L
Sbjct: 155 NGRLIEANSSFKEILR----PSSTSWNTLISGYCKAGLMDEAVTLFHR 198
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
+I K + ++V+Y ++D+LC V+DA + +++ K + Y+ + G
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 73 Q--MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
+E LL E +++ P + +++ + L +EG++ E + VL M +G +P
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 131 YNSLMDGYCLVKEVNKTKDIFN-TMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
Y + + C ++ + + N M Q P V Y+++I G C EA+ LK
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL + + A P + Y+ + L ++ + + + M +K PT Y +
Sbjct: 284 RLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKAL 343
Query: 69 CIVGQMEAAVCLLN-EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE-GEKP 126
C G+++ AV ++N EM+ P V +N L+ L +G+ EA L M K+
Sbjct: 344 CRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVA 403
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N TY +L+DG C + + + M P V +Y +MI G C + EA+ L
Sbjct: 404 NEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWL 463
Query: 187 KH 188
+
Sbjct: 464 EE 465
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 16 GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME 75
G + N ++ LC+ + A +F EM + P +Y L+ GFC+ G++E
Sbjct: 145 GWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLE 204
Query: 76 AAVCLLNEMVL----KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
A LL M K D++ + L+DAL G V +A +L ++++G K Y
Sbjct: 205 EATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCY 264
Query: 132 NSLMDGY 138
+ + G+
Sbjct: 265 HHIEAGH 271
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV--ITYNTLIFGFCIVGQMEAAV 78
P V +YN +I LC D +A +M +K++S TY TL+ G C GQ A
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKM-SKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
++ EM++KS P V T++ ++ L R EA L M+ + P + +L +
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Query: 139 CL 140
C
Sbjct: 486 CF 487
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 5/196 (2%)
Query: 7 ALQLLRQIQGK--SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
AL+L + + + S N +Y T+ID L K V + + M + ++
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I F G++E A+ L + + ++F+TL+ + KE ++ A ++ E
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 125 -KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
+ N LM C V + +F M PD SY I++ GFC ++EA
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 184 NLLKHPILYWMLYAKA 199
+LL ++W + K
Sbjct: 208 HLLYS--MFWRISQKG 221
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 2 GHTRPALQLLRQIQGK-SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G + A+ L+++ + S N Y T++D LC+D +A + EM+ K P V T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDAL 103
Y+ +I G C + + AV L EMV + + P+ + L +++
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 13 QIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVG 72
+I K + ++V+Y ++D+LC V+DA + +++ K + Y+ + G
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 73 Q--MEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVT 130
+E LL E +++ P + +++ + L +EG++ E + VL M +G +P
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 131 YNSLMDGYCLVKEVNKTKDIFN-TMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLLK 187
Y + + C ++ + + N M Q P V Y+++I G C EA+ LK
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 9 QLLRQIQGKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGF 68
+LL + + A P + Y+ + L ++ + + + M +K PT Y +
Sbjct: 284 RLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKAL 343
Query: 69 CIVGQMEAAVCLLN-EMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKE-GEKP 126
C G+++ AV ++N EM+ P V +N L+ L +G+ EA L M K+
Sbjct: 344 CRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVA 403
Query: 127 NVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEALNLL 186
N TY +L+DG C + + + M P V +Y +MI G C + EA+ L
Sbjct: 404 NEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWL 463
Query: 187 KH 188
+
Sbjct: 464 EE 465
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 16 GKSAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQME 75
G + N ++ LC+ + A +F EM + P +Y L+ GFC+ G++E
Sbjct: 145 GWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLE 204
Query: 76 AAVCLLNEMVL----KSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTY 131
A LL M K D++ + L+DAL G V +A +L ++++G K Y
Sbjct: 205 EATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCY 264
Query: 132 NSLMDGY 138
+ + G+
Sbjct: 265 HHIEAGH 271
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 21 PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTV--ITYNTLIFGFCIVGQMEAAV 78
P V +YN +I LC D +A +M +K++S TY TL+ G C GQ A
Sbjct: 367 PTVGVYNVLIKGLCDDGKSMEAVGYLKKM-SKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 79 CLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGY 138
++ EM++KS P V T++ ++ L R EA L M+ + P + +L +
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Query: 139 CL 140
C
Sbjct: 486 CF 487
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 5/196 (2%)
Query: 7 ALQLLRQIQGK--SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTL 64
AL+L + + + S N +Y T+ID L K V + + M + ++
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 65 IFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGE 124
I F G++E A+ L + + ++F+TL+ + KE ++ A ++ E
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 125 -KPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGFCKIKMVDEAL 183
+ N LM C V + +F M PD SY I++ GFC ++EA
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 184 NLLKHPILYWMLYAKA 199
+LL ++W + K
Sbjct: 208 HLLYS--MFWRISQKG 221
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 2 GHTRPALQLLRQIQGK-SAQPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVIT 60
G + A+ L+++ + S N Y T++D LC+D +A + EM+ K P V T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 61 YNTLIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDAL 103
Y+ +I G C + + AV L EMV + + P+ + L +++
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 12 RQIQGKSAQ----PNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFG 67
R I G + + ++V+ N +ID K K + +A ++F M + + T+N+++
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDL----FTWNSVLCV 337
Query: 68 FCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG---- 123
G + + L M+ I PD++T T++ + +++ + + MI G
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNR 397
Query: 124 EKPNVVTYNSLMDGYCLVKEVNKTKDIFNTMTQMEVTPDVWSYSIMINGF 173
+ N +NSLMD Y ++ + +F++M D S++IMING+
Sbjct: 398 KSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR----VKDSASWNIMINGY 443
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 20 QPNVVMYNTIIDSLCKDKLVNDAYNLFSEMVTKRISPTVITYNTLIFGFCIVGQMEAAVC 79
+ NVV+ N +ID K ++DA +F M K +++N ++ G++E +
Sbjct: 189 KGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK----DTVSWNAIVASCSRNGKLELGLW 244
Query: 80 LLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEGEKPNVVTYNSLMDGYC 139
++M NPD +T+N L+DA K G A VL+ M PN ++N+++ GY
Sbjct: 245 FFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDM----PNPNSSSWNTILTGYV 296
Query: 140 LVKEVNKTKDIFNTMTQMEVTPDVWSYSI 168
++ + + F M V D +S SI
Sbjct: 297 NSEKSGEATEFFTKMHSSGVRFDEYSLSI 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 8 LQLLRQIQGKSAQPNVVMYNTIIDSLCK----DKLVNDAYNLFSEMVTKRISPTVITYNT 63
+ L RQ+ G + V + +SL + + DA+ +F EM P VI++N+
Sbjct: 71 VSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP----DPDVISWNS 126
Query: 64 LIFGFCIVGQMEAAVCLLNEMVLKSINPDVITFNTLVDALSKEGRVKEAKNVLAVMIKEG 123
L+ G+ G+ + +CL E+ + P+ +F + A ++ + + ++K G
Sbjct: 127 LVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLG 186
Query: 124 -EKPNVVTYNSLMDGY 138
EK NVV N L+D Y
Sbjct: 187 LEKGNVVVGNCLIDMY 202