Miyakogusa Predicted Gene

Lj2g3v2099820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2099820.1 Non Chatacterized Hit- tr|C6TEP8|C6TEP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32168
PE,85.99,0,PORPHBDMNASE,Tetrapyrrole biosynthesis, hydroxymethylbilane
synthase; SUBFAMILY NOT NAMED,NULL; PORP,CUFF.38566.1
         (344 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08280.1 | Symbols: HEMC | hydroxymethylbilane synthase | chr...   537   e-153

>AT5G08280.1 | Symbols: HEMC | hydroxymethylbilane synthase |
           chr5:2663763-2665596 REVERSE LENGTH=382
          Length = 382

 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 257/321 (80%), Positives = 286/321 (89%)

Query: 22  VKASIAVEQPTKLALIKIGTRGSPLALAQAYETRDKLIASHSELAEEGAIQIVIIKTTGD 81
           VKA +AVEQ T+ A+I+IGTRGSPLALAQAYETR+KL   H EL E+GAI I IIKTTGD
Sbjct: 60  VKACVAVEQKTRTAIIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGD 119

Query: 82  KILSQPLADIGGKGLFTKEIDEALLNGEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRD 141
           KILSQPLADIGGKGLFTKEIDEAL+NG IDIAVHSMKDVPTYLP+KTILPCNLPREDVRD
Sbjct: 120 KILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRD 179

Query: 142 AFIXXXXXXXXXXPAGSVIGTASLRRKSQILHRYPSLNVQDNFRGNVQTRLKKLNEGVVK 201
           AFI          PAGSV+GTASLRRKSQILH+YP+L+V++NFRGNVQTRL KL  G V+
Sbjct: 180 AFICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQ 239

Query: 202 ATLLALAGLKRLNMTENVTSTLSIEEKLPAVAQGAIGIACRSDDDKMAEYIASLNHEETR 261
           ATLLALAGLKRL+MTENV S LS++E LPAVAQGAIGIACR+DDDKMA Y+ASLNHEETR
Sbjct: 240 ATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETR 299

Query: 262 LAVVCERAFLLTLDGSCRTPIAGYASRNEDGNCLFRGLVASPDGTRVLETSRVGPYAVED 321
           LA+ CERAFL TLDGSCRTPIAGYAS++E+GNC+FRGLVASPDGT+VLETSR GPY  ED
Sbjct: 300 LAISCERAFLETLDGSCRTPIAGYASKDEEGNCIFRGLVASPDGTKVLETSRKGPYVYED 359

Query: 322 MIEMGKDAGKELLSRAGPNFF 342
           M++MGKDAG+ELLSRAGP FF
Sbjct: 360 MVKMGKDAGQELLSRAGPGFF 380