Miyakogusa Predicted Gene

Lj2g3v2089750.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2089750.2 tr|B9HP09|B9HP09_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1088048 PE=4
SV=1,85.69,0,BchD-ChlD: magnesium chelatase ATPase subunit D,Magnesium
chelatase, ATPase subunit D; von Willebran,CUFF.38559.2
         (473 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08520.1 | Symbols: ALB1, ALB-1V, V157, PDE166, CHLD | ALBINA...   682   0.0  

>AT1G08520.1 | Symbols: ALB1, ALB-1V, V157, PDE166, CHLD | ALBINA 1
           | chr1:2696538-2700819 FORWARD LENGTH=760
          Length = 760

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/473 (74%), Positives = 376/473 (79%), Gaps = 2/473 (0%)

Query: 1   MSFEDRVAAVGVATEFQENSGQVFKMIEEETDTAKTQIILSREYLKDVTISTEQLKYLVI 60
           MSFEDRVAAVG+AT+FQE   +VF+M+ EET+TAKTQIIL+REYLKDV IS EQLKYLV+
Sbjct: 290 MSFEDRVAAVGIATQFQERCNEVFRMVNEETETAKTQIILAREYLKDVKISREQLKYLVL 349

Query: 61  EALRGGCQGHRAELYAARVAKCLAALEGREKVFVDDLKKAVELVILPRSIITEKXXXXXX 120
           EA+RGG QGHRAELYAARVAKCLAA+EGREKV +DDL+KAVELVILPRS + E       
Sbjct: 350 EAVRGGVQGHRAELYAARVAKCLAAIEGREKVTIDDLRKAVELVILPRSSLDE-TPPEQQ 408

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPEEFIFDAEGGFVDE 180
                                                       +PEEFIFDAEGG VDE
Sbjct: 409 NQPPPPPPPPQNSESGEEENEEEQEEEEEDESNEENENEQQQDQIPEEFIFDAEGGLVDE 468

Query: 181 KLLFFAQQAQRKRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR 240
           KLLFFAQQAQ++RGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR
Sbjct: 469 KLLFFAQQAQKRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR 528

Query: 241 REKDTESRRKVYVEKTDXXXXXXXXXXGALVIFVVDASGSMALNRMQNAKGAALKLLAES 300
           REKD    RKV+VEKTD          GALVIFVVDASGSMALNRMQNAKGAALKLLAES
Sbjct: 529 REKDISGTRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQNAKGAALKLLAES 588

Query: 301 YTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAE 360
           YTSRDQVSIIPFRGD+AEVLLPPSRSIAMAR RLERLPCGGGSPLAHGLTTAVRVGLNAE
Sbjct: 589 YTSRDQVSIIPFRGDAAEVLLPPSRSIAMARNRLERLPCGGGSPLAHGLTTAVRVGLNAE 648

Query: 361 KSGDVGRIMIVAITDGRANISLKRSNXXXXXXXXXXXXXXXXXLKDEILEVAGKIYKAGM 420
           KSGDVGRIMIVAITDGRANI+LKRS                  LKDEILEVAGKIYKAGM
Sbjct: 649 KSGDVGRIMIVAITDGRANITLKRST-DPESIAPDAPRPTSKELKDEILEVAGKIYKAGM 707

Query: 421 SLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALSALKNS 473
           SLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVIS+ T++ALS LKNS
Sbjct: 708 SLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISATTRDALSDLKNS 760