Miyakogusa Predicted Gene
- Lj2g3v2088400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2088400.1 gene.g42934.t1.1
(470 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 353 1e-97
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 2e-92
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 1e-91
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 332 2e-91
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 3e-91
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 6e-90
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 7e-90
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 9e-90
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 3e-89
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 4e-89
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 6e-89
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 3e-88
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 9e-86
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 4e-84
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 4e-83
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 9e-83
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 299 3e-81
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 8e-81
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 8e-77
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 2e-74
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 2e-74
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 7e-72
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 2e-71
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 264 8e-71
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 262 3e-70
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 2e-69
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 1e-63
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 5e-63
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 2e-62
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 5e-60
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 6e-58
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 208 5e-54
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 205 5e-53
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 1e-52
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 5e-52
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 201 6e-52
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 5e-51
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 5e-51
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 6e-51
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 197 2e-50
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 6e-50
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 192 5e-49
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 8e-49
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 8e-49
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 9e-49
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 184 8e-47
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 2e-46
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 4e-46
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 4e-46
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 1e-44
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 176 2e-44
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 174 1e-43
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 173 2e-43
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 171 1e-42
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 164 2e-40
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 155 5e-38
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 6e-38
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 6e-38
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 1e-36
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 147 2e-35
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 6e-35
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 142 6e-34
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 7e-33
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 134 1e-31
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 134 2e-31
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 132 5e-31
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 128 9e-30
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 128 1e-29
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 123 3e-28
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 122 4e-28
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 120 2e-27
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 119 4e-27
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 117 2e-26
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 116 3e-26
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 3e-26
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 115 5e-26
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 110 2e-24
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 109 4e-24
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 109 5e-24
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 3e-23
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 105 8e-23
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 105 9e-23
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 104 1e-22
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 5e-22
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 102 6e-22
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 102 8e-22
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 100 4e-21
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 98 1e-20
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 94 2e-19
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 94 2e-19
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 94 2e-19
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 94 2e-19
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 92 8e-19
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 92 9e-19
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 92 1e-18
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 92 1e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 92 1e-18
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 91 2e-18
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 91 2e-18
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 90 3e-18
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 89 6e-18
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 85 1e-16
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 84 2e-16
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 82 1e-15
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 81 2e-15
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 81 2e-15
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 79 5e-15
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 79 9e-15
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 79 1e-14
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 78 1e-14
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 77 3e-14
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 75 8e-14
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 75 1e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 72 6e-13
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 72 1e-12
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 69 6e-12
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 55 1e-07
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 1e-07
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 1e-07
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 55 1e-07
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 353 bits (906), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/492 (36%), Positives = 284/492 (57%), Gaps = 52/492 (10%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P +++F++FF+++ +TK + + +Q++ + +++T NI+INC+C + A
Sbjct: 83 RPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFA 142
Query: 62 FSVLCNIFKRGYQPDTITFNTIIK---IQGKLA--------------QPDVVMY------ 98
+SVL + K GY+PDT TFNT+IK ++GK++ QPDVV Y
Sbjct: 143 YSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG 202
Query: 99 -----------------------------STIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
STIIDSLC+D ++ A +L+ EM K I
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VVTY +L+ G C G+ + LL MV + I P+V TF++L+D KEGK++EA +
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
MI G P+++TY++LMDGYC+ N +++A ++ + M R + +PD+ +++ +I G C +K
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
VDD + +F+ + + N VTYS L+ G C+SG+I A EL EM S G+ P+V+TY
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
LLD LC N ++ A+ + + ++ + + YT +++G+CKGG+++DA +F L K
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G +V TYT+MI+GLCK G EA L+ KME++G PN TY +I A + GD +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 430 EKLLRQMIARGL 441
KL+ +M + G
Sbjct: 563 AKLIEEMKSCGF 574
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 195/350 (55%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P +V +S ++ + K N + ++ I+ ++ T +I+ FC + A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L +++ PD TF+ L+ L EGKV EA ++ M++ G +PDVVTY+S+++G C
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ + A D+ M + DV +YS +I+ LC+ +D A++LFK+M T+ I +VVT
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y+SL+ GLCK+G+ +D L+ +M SR + PNVIT++ LLD K + A L K+M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+GI PN+ TY L+DG C RL +A + ++ + D+ T+T +I G C D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+ + + + G NAVTY I++ Q G AE+L ++M++ G+L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 184/331 (55%)
Query: 112 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
+DA L+ EM+ R P +V ++ S Q + Q+ L I ++YT +I+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
++ C+ K A +VL ++K G +PD T+++L+ G L +V++A + + M
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
PDV +Y+ ++NG+C+ AL+L ++M N+ +V TYS++ID LC+ G I A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
L EM ++G+ +V+TY+SL+ LCK ++ L+K M + I+PNV T+ +LLD
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 352 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
K G+L++A E++++++ +G + ++ TY +++G C EA ++ M N C+P+ V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 412 TYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
T+ +I D K+ R + RGL+
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 16/194 (8%)
Query: 288 DAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
DA L EM SR LP +++ +S A+ + + + K+++ GI N+YT I+
Sbjct: 71 DAIALFQEMIRSRPLP-SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
++ C+ + A V ++ GY D T+ +I GL +G EA+ L+ +M +NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF-YATEFEAV----------- 454
P+ VTY I+ + + GD A LLR+M R + +F Y+T +++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 455 --EELSAPGLRSPV 466
+E+ G++S V
Sbjct: 250 LFKEMETKGIKSSV 263
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 291/528 (55%), Gaps = 87/528 (16%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I+EFNK +++ K + ISL ++M R+ DL+++NILINC+C Q+ A
Sbjct: 75 RPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLA 134
Query: 62 FSVLCNIFKRGYQPD-----------------------------------TITFNTII-- 84
+VL + K GY+PD T+TFNT+I
Sbjct: 135 LAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 85 ---------------KIQGKLAQP-----------------------------------D 94
++ + QP D
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
VV+Y+TIID+LC K VNDA NL++EM K I P+VVTY +LI C G+ +A LL+
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
M+ + INP+V TFS L+DA KEGK+ EA+ + MIK PD+ TYSSL++G+C+ +
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+++A+ +F M + P+V +Y+ +I G CK K V++ + LF++M + N VTY+
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LI GL ++G A ++ +M S G+PP++ITYS LLD LCK ++ A+ + + ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
+ P++YTY I+++G+CK G+++D ++F L +KG +V YT MI+G C+ GL +EA
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
AL +M+++G PN+ TY +I A + GD + +L+++M + G +
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 229/416 (55%), Gaps = 18/416 (4%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+ L +M R +P + FN L++ + + F ++ ++ +R
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK----FDLVISLGER-------------- 105
Query: 86 IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
+Q D+ Y+ +I+ C+ + A + +M+ PD+VT ++L++G+C +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
+ EAV L++QM + P+ TF+ L+ L K EA ++ M+ G +PD+ TY +
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
+++G C +++ A + M + ++ DV Y+ +I+ LC K V+DALNLF +M +
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
I PNVVTY+SLI LC GR SDA L+++M R + PNV+T+S+L+DA K + A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
L +M + I P+++TY+ L++G C RL +A+ +F+ ++ K +V TY +I G
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
CK +E + L +M G N VTY +I LFQ GD D A+K+ ++M++ G+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 227/447 (50%), Gaps = 55/447 (12%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M P + FN L + A++L +M R PDLFT+ ++N C G I
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 61 AFSVL-------------------------------CNIF----KRGYQPDTITFNTIIK 85
A S+L N+F +G +P+ +T+N++I+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 86 ------------------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS 127
I+ K+ P+VV +S +ID+ K+ + +A LY EM+ + I
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
PD+ TY++LI+GFC+ +L EA + M+ K P+V T++ L+ CK +V+E +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
M + G + VTY++L+ G + + A+ IF M + PD+ +YSI+++GLCK
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 248 IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
++ AL +F+ + + P++ TY+ +I+G+CK+G++ D W+L + +G+ PNVI
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 308 YSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLL 367
Y++++ C+ + A +L ++MK G LPN TY L+ + G + E+ +++
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 368 IKGYNLDVRTYTIMINGLCKDGLFDEA 394
G+ D T +++IN L DG +++
Sbjct: 598 SCGFVGDASTISMVINML-HDGRLEKS 623
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 202/375 (53%), Gaps = 10/375 (2%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P +V ++ ++ ++ K + +L M RIS D+ +Y LI+ FC QL A+ +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L +M+ PD+ T S L++ C ++ EA ++ M +P+ VT+++L+ G L
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
N+ ++A + + M PD+ +Y ++NGLCK +D AL+L K+M I +VV
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y+++ID LC ++DA L EM ++G+ PNV+TY+SL+ LC +A L+ M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I PNV T++ L+D K G+L +A++++ +++ + + D+ TY+ +ING C D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG----------LL 442
EA + M C PN VTY +I + ++ +L R+M RG L+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 443 TGLFYATEFEAVEEL 457
GLF A + + +++
Sbjct: 438 QGLFQAGDCDMAQKI 452
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 118/227 (51%)
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+++ A D+F M + P + ++ +++ + K+ D ++L ++M I+ ++ +Y+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
LI+ C+ ++ A ++ +M G P+++T SSLL+ C + A++L+ +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
PN T+ L+ GL + +A + ++ +G D+ TY ++NGLCK G D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
L+L+ KME + V Y II AL + + A L +M +G+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 3/167 (1%)
Query: 285 RISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
++ DA +L EM SR LP +++ ++ LL A+ K + D ISL ++M++ I ++Y+Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLP-SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
IL++ C+ +L A V ++ GY D+ T + ++NG C EA+AL+ +M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF-YAT 449
PN VT+ +I+ LF +A L+ +M+ARG LF Y T
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 333 bits (855), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 273/456 (59%), Gaps = 25/456 (5%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I++FN+ +++VK K Y ISL ++M+ + DL+TFNI+INC+C Q++ A
Sbjct: 80 RPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLA 139
Query: 62 FSVLCNIFKRGYQPDTITFNTII-------KIQGKLA----------QPDVVMYSTIIDS 104
S+L + K GY+PD +T +++ ++ ++ +PD+V Y+ IIDS
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LCK K VNDA++ + E+ K I P+VVTYT L++G C + +A LL+ M+ K I P+
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V T+S L+DA K GKV EAK + M++ PD+VTYSSL++G CL + +++A +F+
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M DV SY+ +ING CK K V+D + LF++M + N VTY++LI G ++G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+ A E ++M G+ P++ TY+ LL LC N ++ A+ + + M+ + + ++ TYT
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
++ G+CK G++++A +F L +KG D+ TYT M++GLC GL E AL +KM+
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
G N T GD + +L+++M++ G
Sbjct: 500 GLMKNDCT--------LSDGDITLSAELIKKMLSCG 527
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 198/330 (60%)
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+D +NDA +L+S+M+ R P +V + L+S + + + L +M + I D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TF+I+++ C +V A ++L M+K G +PD VT SL++G+C N V+ A + + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ PD+ +Y+ +I+ LCK K V+DA + FK++ + I PNVVTY++L++GLC S R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
SDA L+++M + + PNVITYS+LLDA KN V A L ++M I P++ TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
++GLC R+ +A ++F ++ KG DV +Y +ING CK ++ + L +M G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
N VTY +I FQ GD DKA++ QM
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 218/438 (49%), Gaps = 52/438 (11%)
Query: 57 QITSAFSVLCNIFKRGYQPDTITFNTI--------------------------------- 83
++ A + ++ K P + FN +
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 84 ---------------IKIQGKLA----QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ I GK+ +PD V ++++ C+ V+DA +L +M+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
PD+V Y +I C ++ +A ++ K I P+V T++ LV+ LC + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+L+ MIK P+V+TYS+L+D + +V +A+++F M RM + PD+ +YS +ING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
LC +D+A +F M ++ +VV+Y++LI+G CK+ R+ D +L EM RGL N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
+TY++L+ + VD A +M GI P+++TY ILL GLC G L+ A +F+
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
D+ + +LD+ TYT +I G+CK G +EA +L + G P+ VTY ++ L KG
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 425 DNDKAEKLLRQMIARGLL 442
+ E L +M GL+
Sbjct: 485 LLHEVEALYTKMKQEGLM 502
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M P I+ ++ L A + M + + D+ ++N LIN +C ++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
+ + +RG +T+T+NT+ IQG D V+ A +S+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTL--IQGFFQAGD----------------VDKAQEFFSQ 390
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M ISPD+ TY L+ G C G+L++A+ + M + ++ D+ T++ ++ +CK GK
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
V+EA ++ + G KPD+VTY+++M G C +++ E ++ M +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 332 bits (852), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 290/528 (54%), Gaps = 89/528 (16%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINC---------- 51
RP P IIEF+K +++ K + ISL +QM + + +T++ILINC
Sbjct: 76 RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 135
Query: 52 -------------------------YCHLGQITSAFSVLCNIFKRGYQPDTIT------- 79
YCH +I+ A +++ +F GYQP+T+T
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 80 ---------------------------------------------FNTIIKI-QGKLAQP 93
FN + K+ QGKL +P
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL-EP 254
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
V++Y+TIID LCK K ++DA NL+ EM K I P+VVTY++LIS C G+ +A LL
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+ M+ + INPDV+TFS L+DA KEGK+ EA+ + M+K P +VTYSSL++G+C+
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+ +++A+ +F M PDV +Y+ +I G CK K V++ + +F++M + N VTY
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+ LI GL ++G A E+ EM S G+PPN++TY++LLD LCKN ++ A+ + + ++
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
+ P +YTY I+++G+CK G+++D ++F +L +KG DV Y MI+G C+ G +E
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
A AL +M+++G PN+ Y +I A + GD + + +L+++M + G
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 213/391 (54%), Gaps = 19/391 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ +N L K KH A++L ++M+ + + P++ T++ LI+C C+ G+ + A +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L ++ +R PD TF S +ID+ K+ + +A LY EM+ +
Sbjct: 314 LSDMIERKINPDVFTF------------------SALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
I P +VTY++LI+GFC+ +L EA + MV K PDV T++ L+ CK +V+E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
V M + G + VTY+ L+ G + + A++IF M + P++ +Y+ +++G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
LCK ++ A+ +F+ + + P + TY+ +I+G+CK+G++ D W+L + +G+ P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
V+ Y++++ C+ + A +L K+MK G LPN Y L+ + G + + E+ +
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
++ G+ D T ++ N L DG D++
Sbjct: 596 EMRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 202/401 (50%), Gaps = 70/401 (17%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
++DA L+ EM+ R P ++ ++ L+S + + + L QM I + YT+SI
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC------------------- 211
L++ C+ ++ A VL M+K G +P++VT SSL++GYC
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 212 ----------------LVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN------------ 243
L N+ ++A + + M PD+ +Y +++N
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 244 -----------------------GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
GLCK K +DDALNLFK+M T+ I PNVVTYSSLI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
C GR SDA L+++M R + P+V T+S+L+DA K + A L +M + I P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
TY+ L++G C RL +A+++F+ ++ K DV TY +I G CK +E + + +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 401 MEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
M G N VTY I+I LFQ GD D A+++ ++M++ G+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 201/375 (53%), Gaps = 10/375 (2%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P ++ +S ++ ++ K + +L +M I + TY+ LI+ FC QL A+ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L +M+ P++ T S L++ C ++ EA ++ M G +P+ VT+++L+ G L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
N+ ++A + + M PD+ +Y +++NGLCK D A NL +M + P V+
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y+++IDGLCK + DA L EM ++G+ PNV+TYSSL+ LC +A L+ M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I P+V+T++ L+D K G+L +A++++ +++ + + + TY+ +ING C D
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG----------LL 442
EA + M C P+ VTY +I + ++ ++ R+M RG L+
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 443 TGLFYATEFEAVEEL 457
GLF A + + +E+
Sbjct: 439 QGLFQAGDCDMAQEI 453
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 139/269 (51%)
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQS 237
E K+ +A + M+K P ++ +S L+ +N+ + + M + + + +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
YSI+IN C+ + AL + +M PN+VT SSL++G C S RIS+A LV++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLK 357
G PN +T+++L+ L ++ A++LI +M +G P++ TY ++++GLCK G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
A + + V Y +I+GLCK D+AL L +ME G PN VTY +I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 418 YALFQKGDNDKAEKLLRQMIARGLLTGLF 446
L G A +LL MI R + +F
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVF 327
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 332 bits (851), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 281/522 (53%), Gaps = 87/522 (16%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I+EFNK +++ K K + ISL ++M ++ L+T+NILINC+C QI+ A
Sbjct: 80 RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 139
Query: 62 FSVLCNIFK-----------------------------------RGYQPDTITFNTII-- 84
++L + K GY+PDTITF T+I
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 85 --------------------------------------------------KIQGKLAQPD 94
K++ + D
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
VV+++TIIDSLCK + V+DA NL+ EM K I P+VVTY++LIS C G+ +A LL+
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
M+ K INP++ TF+ L+DA KEGK EA+ + MIK PD+ TY+SL++G+C+ +
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
++KA+ +F M + PDV +Y+ +I G CK K V+D LF++M + + VTY+
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LI GL G +A ++ +M S G+PP+++TYS LLD LC N ++ A+ + M+
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
I ++Y YT +++G+CK G++ D ++F L +KG +V TY MI+GLC L EA
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
AL+ KM+++G PN+ TY +I A + GD + +L+R+M
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 190/350 (54%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P +V ++ ++ ++ K K + +L +M I + TY LI+ FC Q+ A+ L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L +M+ P + T S L++ C ++ +A ++ M++ G +PD +T+++L+ G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
N+ ++A + + M + P++ +Y +++NGLCK D ALNL +M I +VV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
++++ID LCK + DA L EM ++G+ PNV+TYSSL+ LC +A L+ M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I PN+ T+ L+D K G+ +A++++ D++ + + D+ TY ++NG C D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+A + M C P+ VTY +I + + +L R+M RGL+
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 186/342 (54%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y I+ + D ++DA L+ M+ R P +V + L+S + + + L +M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
I +YT++IL++ C+ ++ A +L M+K G +P +VT SSL++GYC ++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A + + M M PD +++ +I+GL +A+ L +M PN+VTY ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
+GLCK G A L+N+M + + +V+ +++++D+LCK HVD+A++L K+M+ +GI
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
PNV TY+ L+ LC GR DA ++ D++ K N ++ T+ +I+ K+G F EA L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
M P+ TY ++ DKA+++ M+++
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 163/309 (52%), Gaps = 14/309 (4%)
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK------- 197
+L +A+GL MV P + F+ L+ A+ K K V+I GEK
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKK-------FDVVISLGEKMQRLEIV 117
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
+ TY+ L++ +C ++++ A + M ++ P + + S ++NG C K + DA+ L
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
QM P+ +T+++LI GL + S+A LV+ M RG PN++TY +++ LCK
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
D A++L+ KM+ I +V + ++D LCK + DA +F+++ KG +V T
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
Y+ +I+ LC G + +A L+S M + PN VT+ +I A ++G +AEKL MI
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 438 ARGLLTGLF 446
R + +F
Sbjct: 358 KRSIDPDIF 366
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 328 bits (840), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 280/522 (53%), Gaps = 87/522 (16%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHL------ 55
RP P +I+F++ F+++ KTK Y ++L +QM+ + + +L+T +I+INC+C
Sbjct: 83 RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLA 142
Query: 56 -----------------------------GQITSAFSVLCNIFKRGYQPDTITFNTIIK- 85
G+++ A ++ + + G++PD IT NT++
Sbjct: 143 FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 202
Query: 86 --IQGKLA--------------QP-----------------------------------D 94
+ GK A QP D
Sbjct: 203 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
V YS IID LCK +++A+NL++EM K I+ +++TY LI GFC G+ + LL
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
M+ + INP+V TFS+L+D+ KEGK++EA+ + MI G PD +TY+SL+DG+C N
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
++KA + + M P++++++I+ING CK +DD L LF++M + + VTY+
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LI G C+ G+++ A EL EM SR +PPN++TY LLD LC N + A+ + +K++
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
+ ++ Y I++ G+C ++ DA ++F L +KG V+TY IMI GLCK G EA
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
L KME++G P+ TY I+I A GD K+ KL+ ++
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 210/382 (54%), Gaps = 17/382 (4%)
Query: 75 PDTITFNTIIKIQGKLAQPDVVM-----------------YSTIIDSLCKDKLVNDAYNL 117
P I F+ + K Q D+V+ S +I+ C+ + + A++
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 118 YSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCK 177
+++ P+ +T++TLI+G C+ G++ EA+ L+++MV PD+ T + LV+ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQS 237
GK EA ++ M++ G +P+ VTY +++ C + A ++ M + D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
YSI+I+GLCK +D+A NLF +M + IT N++TY+ LI G C +GR D +L+ +M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLK 357
R + PNV+T+S L+D+ K + A L K+M H+GI P+ TYT L+DG CK L
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
A ++ ++ KG + ++RT+ I+ING CK D+ L L KM G + VTY +I
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 418 YALFQKGDNDKAEKLLRQMIAR 439
+ G + A++L ++M++R
Sbjct: 446 QGFCELGKLNVAKELFQEMVSR 467
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 196/351 (55%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P V+ +S + ++ K K + L +M K I+ ++ T + +I+ FC +L A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+ +++ P+ TFS L++ LC EG+V EA ++ M++ G KPD++T ++L++G CL
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ +A + + M P+ +Y ++N +CK A+ L ++M NI + V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
YS +IDGLCK G + +A+ L NEM +G+ N+ITY+ L+ C D+ L++ M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I PNV T+++L+D K G+L++A+E+ ++++ +G D TYT +I+G CK+ D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
+A ++ M GC PN T+ I+I + D +L R+M RG++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 222/413 (53%), Gaps = 19/413 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + + K+ A A+ L ++M+ R + D ++I+I+ C G + +AF++
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 65 LCNIFKRGYQPDTITFNTIIK------------------IQGKLAQPDVVMYSTIIDSLC 106
+ +G + IT+N +I I+ K+ P+VV +S +IDS
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI-NPNVVTFSVLIDSFV 344
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K+ + +A L+ EM+ + I+PD +TYT+LI GFC L +A +++ MV K +P++
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TF+IL++ CK ++ + + M G D VTY++L+ G+C + ++N A+++F M
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
++ P++ +Y I+++GLC + AL +F+++ + ++ Y+ +I G+C + ++
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
DAW+L + +G+ P V TY+ ++ LCK + A L +KM+ G P+ +TY IL
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
+ G + ++ ++L G+++D T ++I+ L L L ++S
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 189/330 (57%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+DA +L+ +M+ R P V+ ++ L S Q + L QM LK I ++YT SI
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
+++ C+ K+ A + + +IK G +P+ +T+S+L++G CL V++A ++ + M M
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
PD+ + + ++NGLC +A+ L +M PN VTY +++ +CKSG+ + A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
EL+ +M R + + + YS ++D LCK+ +DNA +L +M+ +GI N+ TY IL+ G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
C GR D ++ +D++ + N +V T++++I+ K+G EA L +M G P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+TY +I ++ DKA +++ M+++G
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 117/260 (45%), Gaps = 35/260 (13%)
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+ + A D+F M P V +S + + + K K D L L KQM + I N+ T S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS-------- 326
+I+ C+ ++ A+ + ++ G PN IT+S+L++ LC V A+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 327 ---------------------------LIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
LI KM G PN TY +L+ +CK G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 360 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
E+ + + + LD Y+I+I+GLCK G D A L ++ME G T N +TY I+I
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 420 LFQKGDNDKAEKLLRQMIAR 439
G D KLLR MI R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKR 327
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 328 bits (840), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 280/522 (53%), Gaps = 87/522 (16%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I EFNK +++ K K + ISL ++M + +L+T+NILINC+C QI+ A
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 62 FSVLCNIFK-----------------------------------RGYQPDTITFNTII-- 84
++L + K GY+PDTITF T+I
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 85 --------------------------------------------------KIQGKLAQPD 94
K++ + D
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
VV+++TIIDSLCK + V+DA NL+ EM K I P+VVTY++LIS C G+ +A LL+
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
M+ K INP++ TF+ L+DA KEGK EA+ + MIK PD+ TY+SL++G+C+ +
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
++KA+ +F M + PD+ +Y+ +I G CK K V+D LF++M + + VTY+
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LI GL G +A ++ +M S G+PP+++TYS LLD LC N ++ A+ + M+
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
I ++Y YT +++G+CK G++ D ++F L +KG +V TY MI+GLC L EA
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
AL+ KM+++G P++ TY +I A + GD + +L+R+M
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 189/350 (54%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P + ++ ++ ++ K K + +L +M IS ++ TY LI+ FC Q+ A+ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L +M+ P + T S L++ C ++ +A ++ M++ G +PD +T+++L+ G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
N+ ++A + + M + P++ +Y +++NGLCK +D A NL +M I +VV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
++++ID LCK + DA L EM ++G+ PNV+TYSSL+ LC +A L+ M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I PN+ T+ L+D K G+ +A+++ D++ + + D+ TY +ING C D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+A + M C P+ TY +I + + +L R+M RGL+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 178/319 (55%)
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M+ R P + + L+S + + + L +M I+ ++YT++IL++ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+ A +L M+K G +P +VT SSL++GYC ++ A + + M M PD +++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
+I+GL +A+ L +M PN+VTY +++GLCK G I A+ L+N+M +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+ +V+ +++++D+LCK HVD+A++L K+M+ +GI PNV TY+ L+ LC GR DA
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
++ D++ K N ++ T+ +I+ K+G F EA L M P+ TY +I
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 421 FQKGDNDKAEKLLRQMIAR 439
DKA+++ M+++
Sbjct: 301 CMHDRLDKAKQMFEFMVSK 319
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 155/284 (54%)
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 222
P ++ F+ L+ A+ K K ++ M + G ++ TY+ L++ +C ++++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
M ++ P + + S ++NG C K + DA+ L QM P+ +T+++LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
+ S+A LV+ M RG PN++TY +++ LCK +D A +L+ KM+ I +V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
+ ++D LCK + DA +F+++ KG +V TY+ +I+ LC G + +A L+S M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
+ PN VT+ +I A ++G +AEKL MI R + +F
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 117/216 (54%)
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M + P + ++ +++ + K+K D ++L ++M I+ N+ TY+ LI+ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
IS A L+ +M G P+++T SSLL+ C + +A++L+ +M G P+ T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
L+ GL + +A + ++ +G ++ TY +++NGLCK G D A L++KME
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ V + II +L + D A L ++M +G+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 327 bits (839), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 286/522 (54%), Gaps = 87/522 (16%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINC---------- 51
RP P I+EF+K +++ K K + IS ++M+ V +L+T+NI+INC
Sbjct: 60 RPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFA 119
Query: 52 -------------------------YCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-- 84
+CH +I+ A +++ + + GYQPDT+TF T++
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 85 --------------------------------------------------KIQGKLAQPD 94
K++ + D
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
VV+YST+IDSLCK + V+DA NL++EM K I PDV TY++LIS C G+ +A LL+
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
M+ + INP+V TF+ L+DA KEGK+ EA+ + MI+ P++VTY+SL++G+C+ +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+++A+ IF M + PDV +Y+ +ING CK K V D + LF+ M + N VTY+
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LI G ++ +A + +M S G+ PN++TY++LLD LCKN ++ A+ + + ++
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
+ P++YTY I+ +G+CK G+++D ++F L +KG DV Y MI+G CK GL +EA
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
L KM+++G P++ TY +I A + GD + +L+++M
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 209/364 (57%), Gaps = 2/364 (0%)
Query: 78 ITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLI 137
I+F ++I G ++ Y+ +I+ LC+ ++ A + +M+ P +VT +L+
Sbjct: 85 ISFGEKMEILG--VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL 142
Query: 138 SGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK 197
+GFC ++ EAV L++QMV PD TF+ LV L + K EA ++ M+ G +
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
PD+VTY ++++G C E + A ++ N M + ++ DV YS +I+ LCK + VDDALNL
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
F +M + I P+V TYSSLI LC GR SDA L+++M R + PNV+T++SL+DA K
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
+ A L +M + I PN+ TY L++G C RL +AQ++F ++ K DV T
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
Y +ING CK + + L M G N VTY +I+ FQ D D A+ + +QM+
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 438 ARGL 441
+ G+
Sbjct: 443 SDGV 446
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 215/389 (55%), Gaps = 19/389 (4%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ ++ SL K +H A++L +MD + + PD+FT++ LI+C C+ G+ + A +L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
++ +R P+ +TFN++I D+ K+ + +A L+ EM+ + I
Sbjct: 300 DMLERKINPNVVTFNSLI------------------DAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
P++VTY +LI+GFC+ +L EA + MV K PDV T++ L++ CK KV +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+ M + G + VTY++L+ G+ ++ + A+ +F M + P++ +Y+ +++GLC
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K ++ A+ +F+ + + P++ TY+ + +G+CK+G++ D W+L + +G+ P+VI
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
Y++++ CK + A +L KMK G LP+ TY L+ + G + E+ +++
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
+ D TY ++ + L DG D+
Sbjct: 582 RSCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 192/332 (57%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+++A +L+ EM+ R P +V ++ L+S + + + +M + ++ ++YT++I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
+++ LC+ ++ A +L M+K G P +VT +SL++G+C N +++A + + M M
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
PD +++ +++GL + +A+ L ++M + P++VTY ++I+GLCK G A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
L+N+M + +V+ YS+++D+LCK HVD+A++L +M ++GI P+V+TY+ L+ L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
C GR DA + D+L + N +V T+ +I+ K+G EA L +M PN
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
VTY +I D+A+++ M+++ L
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 129/232 (55%)
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
++++A D+F M + P + +S +++ + K+K D ++ ++M ++ N+ TY+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+I+ LC+ ++S A ++ +M G P+++T +SLL+ C + + A++L+ +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
G P+ T+T L+ GL + + +A + + +++KG D+ TY +INGLCK G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
L L++KME + V Y +I +L + D A L +M +G+ +F
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 287/527 (54%), Gaps = 87/527 (16%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINC---------- 51
RP P I+EFNK +++ K + ISL +QM + DL+T++I INC
Sbjct: 78 RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 52 -------------------------YCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-- 84
YCH +I+ A +++ + + GY+PDT TF T+I
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 85 --------------------------------------------------KIQGKLAQPD 94
K++ + D
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 257
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
VV+Y+TIID LCK K ++DA NL++EM K I PDV TY++LIS C G+ +A LL+
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
M+ + INP+V TFS L+DA KEGK+ EA+ + MIK PD+ TYSSL++G+C+ +
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+++A+ +F M + P+V +YS +I G CK K V++ + LF++M + N VTY+
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LI G ++ +A + +M S G+ PN++TY+ LLD LCKN + A+ + + ++
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
+ P++YTY I+++G+CK G+++D E+F +L +KG + +V Y MI+G C+ G +EA
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+L+ KM+++G PN+ TY +I A + GD + + +L+++M + G
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 204/376 (54%), Gaps = 4/376 (1%)
Query: 71 RGYQPDTITFNTIIKIQGKLAQ----PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
R D I + + + G + + P +V ++ ++ ++ K +L +M I
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
S D+ TY+ I+ FC QL A+ +L +M+ PD+ T S L++ C ++ +A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
++ M++ G KPD T+++L+ G L N+ ++A + + M + PD+ +Y ++NGLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K +D AL+L K+M I +VV Y+++IDGLCK + DA L EM ++G+ P+V
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
TYSSL+ LC +A L+ M + I PNV T++ L+D K G+L +A++++ ++
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
+ + + D+ TY+ +ING C DEA + M C PN VTY +I +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 427 DKAEKLLRQMIARGLL 442
++ +L R+M RGL+
Sbjct: 415 EEGMELFREMSQRGLV 430
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 188/361 (52%), Gaps = 14/361 (3%)
Query: 86 IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
+QG P V + + S C ++ A Y E+L R+S D++ +
Sbjct: 18 LQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLS-DII-------------K 63
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
+ +AV L MV P + F+ L+ A+ K K + ++ M G D+ TYS
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
++ +C ++++ A + M ++ PD+ + S ++NG C K + DA+ L QM
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
P+ T+++LI GL + S+A LV++M RG P+++TY ++++ LCK +D A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
SL+KKM+ I +V Y ++DGLCK + DA +F ++ KG DV TY+ +I+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
C G + +A L+S M + PN VT+ +I A ++G +AEKL +MI R + +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 446 F 446
F
Sbjct: 364 F 364
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 325 bits (833), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 255/432 (59%), Gaps = 17/432 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I F+ + A++L +M + PDL T + LIN C G+++ A +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ + + G+QPD +T+ ++ K++ + + VV YS +IDSLCK
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
D +DA +L++EM K I DVVTY++LI G C G+ + +L +M+ ++I PDV T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
FS L+D KEGK+ EAK + MI G PD +TY+SL+DG+C N +++A +F+ M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
PD+ +YSI+IN CK K VDD + LF+++ ++ + PN +TY++L+ G C+SG+++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A EL EM SRG+PP+V+TY LLD LC N ++ A+ + +KM+ + + Y I++
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
G+C ++ DA +F L KG DV TY +MI GLCK G EA L KM+++GCT
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 408 PNAVTYEIIIYA 419
P+ TY I+I A
Sbjct: 558 PDDFTYNILIRA 569
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 266/547 (48%), Gaps = 102/547 (18%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I+FN+ +++ +TK Y + + M+ + D++T I+INCYC ++ A
Sbjct: 65 RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 124
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
FSVL +K GY+PDTITF ST+++ C + V++A L M
Sbjct: 125 FSVLGRAWKLGYEPDTITF------------------STLVNGFCLEGRVSEAVALVDRM 166
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ + PD+VT +TLI+G C+ G++ EA+ L+++MV PD T+ +++ LCK G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
A ++ M + K VV YS ++D C + A +FN M + DV +YS +
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
I GLC DD + ++M NI P+VVT+S+LID K G++ +A EL NEM +RG+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 302 PPNVITYSSLLDALCKNH-----------------------------------HVDNAIS 326
P+ ITY+SL+D CK + VD+ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 327 LIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 386
L +++ +G++PN TY L+ G C+ G+L A+E+FQ+++ +G V TY I+++GLC
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 387 KDGLFDEALALMSKME-----------------------------------DNGCTPNAV 411
+G ++AL + KM+ D G P+ V
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 412 TYEIIIYALFQKGDNDKAEKLLRQM--------------IARGLLTGLFYATEFEAVEEL 457
TY ++I L +KG +A+ L R+M + R L G + E +EE+
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 458 SAPGLRS 464
G +
Sbjct: 587 KVCGFSA 593
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 221/412 (53%), Gaps = 17/412 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + L K+ + A A+ L ++M+ R + + ++I+I+ C G A S+
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ +G + D +T++++I ++ G+ PDVV +S +ID K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ + +A LY+EM+ + I+PD +TY +LI GFC L EA + + MV K PD+ T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+SIL+++ CK +V + + + G P+ +TY++L+ G+C ++N A+++F M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ P V +Y I+++GLC ++ AL +F++M +T + Y+ +I G+C + ++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
DAW L + +G+ P+V+TY+ ++ LCK + A L +KMK G P+ +TY IL+
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
G L + E+ +++ + G++ D T ++I+ L L L ++S
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 192/367 (52%), Gaps = 35/367 (9%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
VNDA +L+ M+ R P + + L S Q +G M L I D+YT +I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
+++ C++ K+ A +VL K G +PD +T+S+L++G+CL V++A + + M M+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 231 LAPDVQSYSIMINGLCKIKMVDD-----------------------------------AL 255
PD+ + S +INGLC V + AL
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
+LF++M NI +VV YS +ID LCK G DA L NEM +G+ +V+TYSSL+ L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
C + D+ ++++M + I+P+V T++ L+D K G+L +A+E++ +++ +G D
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
TY +I+G CK+ EA + M GC P+ VTY I+I + + D +L R+
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 436 MIARGLL 442
+ ++GL+
Sbjct: 411 ISSKGLI 417
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 137/263 (52%)
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
KV +A ++ MI+ P + ++ L + + M + D+ + +
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
IMIN C+ K + A ++ + P+ +T+S+L++G C GR+S+A LV+ M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
P+++T S+L++ LC V A+ LI +M G P+ TY +L+ LCK G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 360 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
++F+ + + V Y+I+I+ LCKDG FD+AL+L ++ME G + VTY +I
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 420 LFQKGDNDKAEKLLRQMIARGLL 442
L G D K+LR+MI R ++
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNII 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNH 319
+H +IT ++Y + +++DA +L M SR LP I ++ L A+ +
Sbjct: 26 LHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLP-TPIDFNRLCSAVARTK 84
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
D + K M+ GI ++YT TI+++ C+ +L A V GY D T++
Sbjct: 85 QYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFS 144
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
++NG C +G EA+AL+ +M + P+ VT +I L KG +A L+ +M+
Sbjct: 145 TLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Query: 440 GL 441
G
Sbjct: 205 GF 206
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 325 bits (832), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 258/450 (57%), Gaps = 17/450 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P + F+ L + A+ L +M P L T N L+N C G+++ A
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQP-----------------DVVMYSTIIDSLC 106
++ + + G+QP+ +T+ ++K+ K Q D V YS IID LC
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
KD +++A+NL++EM K D++ YTTLI GFC G+ + LL M+ + I PDV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
FS L+D KEGK++EA+ + MI+ G PD VTY+SL+DG+C N+++KA + + M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
P++++++I+ING CK ++DD L LF++M + + VTY++LI G C+ G++
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
A EL EM SR + P++++Y LLD LC N + A+ + +K++ + ++ Y I+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+ G+C ++ DA ++F L +KG DV+TY IMI GLCK G EA L KME++G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+PN TY I+I A +GD K+ KL+ ++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 259/457 (56%), Gaps = 17/457 (3%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P +I+F++ F+ + +TK Y + L +QM+ + + +L+T +I+INC C +++ A
Sbjct: 67 RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLA 126
Query: 62 FSVLCNIFKRGYQPDTITFNTIIK---IQGKLAQ--------------PDVVMYSTIIDS 104
FS + I K GY+PDT+TF+T+I ++G++++ P ++ + +++
Sbjct: 127 FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LC + V+DA L M+ P+ VTY ++ C GQ A+ LL +M + I D
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
+SI++D LCK+G + A N+ M G K D++ Y++L+ G+C + +
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M + ++ PDV ++S +I+ K + +A L K+M I+P+ VTY+SLIDG CK
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
++ A +++ M S+G PN+ T++ L++ CK + +D+ + L +KM +G++ + TY
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
L+ G C+ G+L+ A+E+FQ+++ + D+ +Y I+++GLC +G ++AL + K+E +
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ Y III+ + D A L + +G+
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 221/413 (53%), Gaps = 19/413 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + + K+ A A+ L ++M+ R++ D ++I+I+ C G + +AF++
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 65 LCNIFKRGYQPDTITFNTIIK------------------IQGKLAQPDVVMYSTIIDSLC 106
+ +G++ D I + T+I+ I+ K+ PDVV +S +ID
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT-PDVVAFSALIDCFV 328
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K+ + +A L+ EM+ + ISPD VTYT+LI GFC QL +A +L+ MV K P++
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TF+IL++ CK + + + M G D VTY++L+ G+C + ++ A+++F M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ PD+ SY I+++GLC + AL +F+++ + ++ Y+ +I G+C + ++
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
DAW+L + +G+ P+V TY+ ++ LCK + A L +KM+ G PN TY IL
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
+ G + ++ +++ G+++D T ++++ L L L ++S
Sbjct: 569 IRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 192/352 (54%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+P ++ +S + + + K + +L +M K I+ ++ T + +I+ C +L A
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+ +++ PD TFS L++ LC EG+V EA ++ M++ G KP ++T ++L++G C
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
L +V+ A + + M P+ +Y ++ +CK A+ L ++M I + V
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
YS +IDGLCK G + +A+ L NEM +G ++I Y++L+ C D+ L++ M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+ I P+V ++ L+D K G+L++A+E+ ++++ +G + D TYT +I+G CK+
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
D+A ++ M GC PN T+ I+I + D +L R+M RG++
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 182/329 (55%)
Query: 112 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
+DA +L+ EM R P ++ ++ L S Q + L QM LK I ++YT SI+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
++ C+ K+ A + + +IK G +PD VT+S+L++G CL V++A ++ + M M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
P + + + ++NGLC V DA+ L +M PN VTY ++ +CKSG+ + A E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
L+ +M R + + + YS ++D LCK+ +DNA +L +M+ +G ++ YT L+ G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 352 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
GR D ++ +D++ + DV ++ +I+ K+G EA L +M G +P+ V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 412 TYEIIIYALFQKGDNDKAEKLLRQMIARG 440
TY +I ++ DKA +L M+++G
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P I+ + L A+ + ++++ ++ D+ +NI+I+ C+ ++ A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+ + C++ +G +PD T+N +I LCK +++A L+ +M
Sbjct: 512 WDLFCSLPLKGVKPDVKTYN------------------IMIGGLCKKGSLSEADLLFRKM 553
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
SP+ TY LI G ++ L+ ++ + D T ++VD L +G++
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRL 612
Query: 182 KEA 184
K++
Sbjct: 613 KKS 615
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/460 (38%), Positives = 272/460 (59%), Gaps = 20/460 (4%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P II+F K + K K + I+L + V DL+T N+L+NC+C Q A
Sbjct: 67 RPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLA 126
Query: 62 FSVLCNIFKRGYQPDTITFNTII-------KIQGKLA----------QPDVVMYSTIIDS 104
S L + K G++PD +TF ++I +++ ++ +PDVVMY+TIIDS
Sbjct: 127 SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LCK+ VN A +L+ +M I PDVV YT+L++G C G+ ++A LL M + I PD
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V TF+ L+DA KEGK +A+ + MI+ P++ TY+SL++G+C+ V++A +F
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M PDV +Y+ +ING CK K VDDA+ +F +M + +T N +TY++LI G + G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ---GILPNVY 341
+ + A E+ + M SRG+PPN+ TY+ LL LC N V A+ + + M+ + G+ PN++
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 401
TY +LL GLC G+L+ A VF+D+ + ++ + TYTI+I G+CK G A+ L +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 402 EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
G PN VTY +I LF++G +A L R+M G+
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 231/436 (52%), Gaps = 20/436 (4%)
Query: 24 ATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTI 83
A+S S+ +D + + ++ H Q A + ++ + P I F +
Sbjct: 19 GKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKL 78
Query: 84 IKIQGKLAQPDVV---------------MYST--IIDSLCKDKLVNDAYNLYSEMLAKRI 126
+ + K+ + DVV +Y+ +++ C+ A + +M+
Sbjct: 79 LNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF 138
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
PD+VT+T+LI+GFC+ +++EA+ ++NQMV I PDV ++ ++D+LCK G V A +
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+ M G +PDVV Y+SL++G C A+ + MT+ ++ PDV +++ +I+
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K DA L+ +M +I PN+ TY+SLI+G C G + +A ++ M ++G P+V+
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
Y+SL++ CK VD+A+ + +M +G+ N TYT L+ G + G+ AQEVF +
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALAL---MSKMEDNGCTPNAVTYEIIIYALFQK 423
+ +G ++RTY ++++ LC +G +AL + M K E +G PN TY ++++ L
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 424 GDNDKAEKLLRQMIAR 439
G +KA + M R
Sbjct: 439 GKLEKALMVFEDMRKR 454
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 195/330 (59%)
Query: 112 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
N+A +L++ M+ R P ++ +T L++ + + + L + + + ++ D+YT ++L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
++ C+ + A + L M+K G +PD+VT++SL++G+CL N + +A + N M M +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
PDV Y+ +I+ LCK V+ AL+LF QM I P+VV Y+SL++GLC SGR DA
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
L+ M R + P+VIT+++L+DA K +A L +M I PN++TYT L++G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 352 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
G + +A+++F + KG DV YT +ING CK D+A+ + +M G T N +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 412 TYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
TY +I Q G + A+++ M++RG+
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 90/357 (25%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M P ++ + SL K H A+SL QM+ + PD+ + L+N C+ G+
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKI---QGKLAQ------------------------- 92
A S+L + KR +PD ITFN +I +GK
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 93 ------------------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
PDVV Y+++I+ CK K V+DA ++ EM K ++
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 129 DVVTYTTLISGF-----------------------------------CIVGQLKEAVGLL 153
+ +TYTTLI GF C G++K+A+ +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 154 NQMV---LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 210
M + + P+++T+++L+ LC GK+++A V M K ++TY+ ++ G
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
C +V A ++F ++ + P+V +Y+ MI+GL + + +A LF++M + ++
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 266/450 (59%), Gaps = 19/450 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ N + A+SL QM PD FTFN LI+ + + A ++
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 65 LCNIFKRGYQPDTITFNTIIK------------------IQGKLAQPDVVMYSTIIDSLC 106
+ + +G QPD +T+ ++ QGK+ +P VV+Y+TIID+LC
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI-EPGVVIYNTIIDALC 267
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K VNDA NL++EM K I P+VVTY +LI C G+ +A LL+ M+ + INP+V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TFS L+DA KEGK+ EA+ + MIK PD+ TYSSL++G+C+ + +++A+ +F M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ P+V +Y+ +I G CK K VD+ + LF++M + N VTY++LI G ++
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A + +M S G+ P+++TYS LLD LC N V+ A+ + + ++ + P++YTY I+
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
++G+CK G+++D ++F L +KG +V TYT M++G C+ GL +EA AL +M++ G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
P++ TY +I A + GD + +L+R+M
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 264/493 (53%), Gaps = 52/493 (10%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I+EF+K +++ K + ISL +QM + +L+T++ILINC+C Q++ A
Sbjct: 76 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLA 135
Query: 62 FSVLCNIFK-----------------------------------RGYQPDTITFNTII-- 84
+VL + K GYQPD+ TFNT+I
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 85 ---------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
++ K QPD+V Y +++ LCK ++ A +L +M +I P
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VV Y T+I C + +A+ L +M K I P+V T++ L+ LC G+ +A +L+
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
MI+ P+VVT+S+L+D + ++ +AE +++ M + + PD+ +YS +ING C
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+D+A ++F+ M +++ PNVVTY++LI G CK+ R+ + EL EM RGL N +TY+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+L+ + DNA + K+M G+LP++ TY+ILLDGLC G+++ A VF+ L
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
D+ TY IMI G+CK G ++ L + G PN VTY ++ +KG ++A
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 430 EKLLRQMIARGLL 442
+ L R+M G L
Sbjct: 556 DALFREMKEEGPL 568
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 224/403 (55%), Gaps = 17/403 (4%)
Query: 57 QITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM-----------------YS 99
++ A ++ ++ K P + F+ ++ K+ + D+V+ YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
+I+ C+ ++ A + ++M+ PD+VT +L++GFC ++ +AV L+ QMV
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
PD +TF+ L+ L + + EA ++ M+ G +PD+VTY +++G C +++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
+ M + ++ P V Y+ +I+ LC K V+DALNLF +M + I PNVVTY+SLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
LC GR SDA L+++M R + PNV+T+S+L+DA K + A L +M + I P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
++TY+ L++G C RL +A+ +F+ ++ K +V TY +I G CK DE + L
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+M G N VTY +I+ FQ + D A+ + +QM++ G+L
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 215/394 (54%), Gaps = 19/394 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ +N +L K+ A++L +MD + + P++ T+N LI C C+ G+ + A +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L ++ +R P+ +TF S +ID+ K+ + +A LY EM+ +
Sbjct: 314 LSDMIERKINPNVVTF------------------SALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
I PD+ TY++LI+GFC+ +L EA + M+ K P+V T++ L+ CK +V E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ M + G + VTY++L+ G+ E + A+ +F M + PD+ +YSI+++G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
LC V+ AL +F+ + + P++ TY+ +I+G+CK+G++ D W+L + +G+ PN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
V+TY++++ C+ + A +L ++MK +G LP+ TY L+ + G + E+ +
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIR 595
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
++ + D T ++ N L DG D++ M
Sbjct: 596 EMRSCRFVGDASTIGLVTNML-HDGRLDKSFLKM 628
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 197/380 (51%), Gaps = 35/380 (9%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y I + D ++DA NL+ +M+ R P +V ++ L+S + + + L QM
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
I+ ++YT+SIL++ C+ ++ A VLA M+K G +PD+VT +SL++G+C N ++
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 218 KAEDIFNTMTRMEL-----------------------------------APDVQSYSIMI 242
A + M M PD+ +Y I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
NGLCK +D AL+L K+M I P VV Y+++ID LC ++DA L EM ++G+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
PNV+TY+SL+ LC +A L+ M + I PNV T++ L+D K G+L +A+++
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
+ +++ + + D+ TY+ +ING C DEA + M C PN VTY +I +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 423 KGDNDKAEKLLRQMIARGLL 442
D+ +L R+M RGL+
Sbjct: 409 AKRVDEGMELFREMSQRGLV 428
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 161/302 (53%)
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
+L +AV L MV P + FS L+ A+ K K ++ M G ++ TYS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
L++ +C ++++ A + M ++ PD+ + + ++NG C + DA++L QM
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
P+ T+++LI GL + R S+A LV+ M +G P+++TY +++ LCK +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
+SL+KKM+ I P V Y ++D LC + DA +F ++ KG +V TY +I
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
LC G + +A L+S M + PN VT+ +I A ++G +AEKL +MI R +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 445 LF 446
+F
Sbjct: 361 IF 362
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 314 bits (804), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 163/425 (38%), Positives = 253/425 (59%), Gaps = 17/425 (4%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I +F++ +++ K K Y I L +QM + +L T NIL+NC+C Q++ A
Sbjct: 76 RPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLA 135
Query: 62 FSVLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDS 104
S L + K G++P +TF +++ ++ G +P+VV+Y+TIID
Sbjct: 136 LSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LCK K V++A +L + M I PDVVTY +LISG C G+ +A +++ M + I PD
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V+TF+ L+DA KEG+V EA+ MI+ PD+VTYS L+ G C+ + +++AE++F
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M PDV +YSI+ING CK K V+ + LF +M + N VTY+ LI G C++G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+++ A E+ M G+ PN+ITY+ LL LC N ++ A+ ++ M+ G+ ++ TY
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
I++ G+CK G + DA +++ L +G D+ TYT M+ GL K GL EA AL KM+++
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Query: 405 GCTPN 409
G PN
Sbjct: 496 GILPN 500
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 195/331 (58%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
++D+ +L+ M+ R P + ++ L+S + + + L QM + I ++ T +I
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
L++ C+ ++ A + L MIK G +P +VT+ SL++G+C + V A +F+ M M
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
P+V Y+ +I+GLCK K VD+AL+L +M + I P+VVTY+SLI GLC SGR SDA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
+V+ M R + P+V T+++L+DA K V A ++M + + P++ TY++L+ GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
C RL +A+E+F ++ KG DV TY+I+ING CK + + L +M G N
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
VTY I+I + G + AE++ R+M+ G+
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 139/261 (53%)
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
K+ ++ ++ M++ P + +S L+ + + + ++ M + + ++ + +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
I++N C+ + AL+ +M P++VT+ SL++G C+ R+ DA + ++M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
G PNV+ Y++++D LCK+ VDNA+ L+ +M+ GI P+V TY L+ GLC GR DA
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 360 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
+ + + DV T+ +I+ K+G EA +M P+ VTY ++IY
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 420 LFQKGDNDKAEKLLRQMIARG 440
L D+AE++ M+++G
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKG 321
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%)
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
Y M+ + +DD+L+LF M P++ +S L+ + K + L +M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLK 357
G+P N+ T + LL+ C+ + A+S + KM G P++ T+ LL+G C+G R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
DA +F ++ GY +V Y +I+GLCK D AL L+++ME +G P+ VTY +I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 418 YALFQKGDNDKAEKLLRQMIARGLLTGLF 446
L G A +++ M R + +F
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVF 257
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 270/498 (54%), Gaps = 87/498 (17%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I EFNK +++ K K + ISL ++M + +L+T+NILINC+C QI+ A
Sbjct: 80 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 139
Query: 62 FSVLCNIFK-----------------------------------RGYQPDTITFNTII-- 84
++L + K GY+PDTITF T+I
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 85 --------------------------------------------------KIQGKLAQPD 94
K++ + +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
VV+YST+IDSLCK + +DA NL++EM K + P+V+TY++LIS C + +A LL+
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
M+ + INP+V TF+ L+DA KEGK+ EA+ + MIK PD+ TYSSL++G+C+ +
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+++A+ +F M + P+V +Y+ +ING CK K +D+ + LF++M + N VTY+
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LI G ++ +A + +M S G+ PN++TY++LLD LCKN ++ A+ + + ++
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
+ P +YTY I+++G+CK G+++D ++F L +KG DV Y MI+G C+ GL +EA
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 395 LALMSKMEDNGCTPNAVT 412
AL KM ++G P++ T
Sbjct: 560 DALFRKMREDGPLPDSGT 577
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 193/350 (55%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P + ++ ++ ++ K K + +L +M IS ++ TY LI+ FC Q+ A+ L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L +M+ P + T S L++ C ++ +A ++ M++ G +PD +T+++L+ G L
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
N+ ++A + + M + P++ +Y +++NGLCK +D A NL +M I NVV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
YS++ID LCK DA L EM ++G+ PNVITYSSL+ LC +A L+ M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I PNV T+ L+D K G+L +A++++ +++ + + D+ TY+ +ING C D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
EA + M C PN VTY +I + D+ +L R+M RGL+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 163/302 (53%)
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
+L +A+GL MV P ++ F+ L+ A+ K K ++ M + G ++ TY+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
L++ +C ++++ A + M ++ P + + S ++NG C K + DA+ L QM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
P+ +T+++LI GL + S+A LV+ M RG PN++TY +++ LCK +D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
+L+ KM+ I NV Y+ ++D LCK DA +F ++ KG +V TY+ +I+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
LC + +A L+S M + PN VT+ +I A ++G +AEKL +MI R +
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 445 LF 446
+F
Sbjct: 365 IF 366
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y ++ S ++ DA L M P++ ++ LL A+ K D ISL +KM+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 333 HQGILPNVYTYTI-----------------------------------LLDGLCKGGRLK 357
GI N+YTY I LL+G C G R+
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
DA + ++ GY D T+T +I+GL EA+AL+ +M GC PN VTY +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 418 YALFQKGDNDKAEKLLRQMIA 438
L ++GD D A LL +M A
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEA 253
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 249/430 (57%), Gaps = 17/430 (3%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P II+F + + + K Y ISL +QM + P L T NI+++C C Q A
Sbjct: 78 RPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA 137
Query: 62 FSVLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDS 104
L + K G++PD +TF +++ +I G +P+VV Y+T+I
Sbjct: 138 SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC 197
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LCK++ +N A L+++M P+VVTY L++G C +G+ +A LL M+ + I P+
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V TF+ L+DA K GK+ EAK + VMI+ PDV TY SL++G C+ +++A +F
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M R P+ Y+ +I+G CK K V+D + +F +M + + N +TY+ LI G C G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
R A E+ N+M SR PP++ TY+ LLD LC N V+ A+ + + M+ + + N+ TYT
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
I++ G+CK G+++DA ++F L KG +V TYT MI+G C+ GL EA +L KM+++
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 405 GCTPNAVTYE 414
G PN Y+
Sbjct: 498 GFLPNESVYK 507
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 188/342 (54%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y I+ + + NDA +L++ M+ R P ++ +T L+S + + + L QM
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
+ I P + T +I++ +C + A L M+K G +PD+VT++SL++GYC N +
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A +F+ + M P+V +Y+ +I LCK + ++ A+ LF QM T PNVVTY++L+
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
GLC+ GR DA L+ +M R + PNVIT+++L+DA K + A L M +
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
P+V+TY L++GLC G L +A+++F + G + YT +I+G CK ++ + +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
+M G N +TY ++I G D A+++ QM +R
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 160/299 (53%)
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
Q +A+ L +MV P + F+ L+ + K + ++ M G P + T +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
+M CL ++ +A M ++ PD+ +++ ++NG C ++DA+ LF Q+
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
PNVVTY++LI LCK+ ++ A EL N+M + G PNV+TY++L+ LC+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
L++ M + I PNV T+T L+D K G+L +A+E++ ++ DV TY +ING
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
LC GL DEA + ME NGC PN V Y +I+ + + K+ +M +G++
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 119/232 (51%)
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+ N A D+F M P + ++ +++ + K+ D ++LF+QM I P + T +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
++ +C S + A + +M G P+++T++SLL+ C + +++AI+L ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
G PNV TYT L+ LCK L A E+F + G +V TY ++ GLC+ G + +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
L+ M PN +T+ +I A + G +A++L MI + +F
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 304 bits (778), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 253/454 (55%), Gaps = 17/454 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + FN L + A+ L +M P L T N L+N C G+++ A +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQP-----------------DVVMYSTIIDSLCK 107
+ + + G+QP+ +T+ ++ + K Q D V YS IID LCK
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
D +++A+NL++EM K D++TY TLI GFC G+ + LL M+ + I+P+V T
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
FS+L+D+ KEGK++EA +L M++ G P+ +TY+SL+DG+C N + +A + + M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
PD+ +++I+ING CK +DD L LF++M + N VTY++L+ G C+SG++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A +L EM SR + P++++Y LLD LC N ++ A+ + K++ + ++ Y I++
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
G+C ++ DA ++F L +KG LD R Y IMI+ LC+ +A L KM + G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
P+ +TY I+I A D A +L+ +M + G
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 289 bits (739), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 267/457 (58%), Gaps = 17/457 (3%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P +I+FN+ F+++ KTK Y ++L +QM+ + + ++T +I+INC+C +++ A
Sbjct: 83 RPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA 142
Query: 62 FSVLCNIFKRGYQPDTITFNTIIK---IQGKLAQ--------------PDVVMYSTIIDS 104
FS + I K GY+PDT+ FNT++ ++ ++++ P ++ +T+++
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LC + V+DA L M+ P+ VTY +++ C GQ A+ LL +M ++I D
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
+SI++D LCK+G + A N+ M G K D++TY++L+ G+C + +
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M + +++P+V ++S++I+ K + +A L K+M I PN +TY+SLIDG CK
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
R+ +A ++V+ M S+G P+++T++ L++ CK + +D+ + L ++M +G++ N TY
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
L+ G C+ G+L+ A+++FQ+++ + D+ +Y I+++GLC +G ++AL + K+E +
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ Y III+ + D A L + +G+
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 217/413 (52%), Gaps = 19/413 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + + K+ A A+ L ++M+ R + D ++I+I+ C G + +AF++
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 65 LCNIFKRGYQPDTITFNTIIK------------------IQGKLAQPDVVMYSTIIDSLC 106
+ +G++ D IT+NT+I I+ K++ P+VV +S +IDS
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS-PNVVTFSVLIDSFV 344
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K+ + +A L EM+ + I+P+ +TY +LI GFC +L+EA+ +++ M+ K +PD+
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TF+IL++ CK ++ + + M G + VTY++L+ G+C ++ A+ +F M
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ PD+ SY I+++GLC ++ AL +F ++ + ++ Y +I G+C + ++
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
DAW+L + +G+ + Y+ ++ LC+ + A L +KM +G P+ TY IL
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
+ A E+ +++ G+ DV T ++IN L L L ++S
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 193/351 (54%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P V+ ++ + ++ K K L +M +K I+ + T + +I+ FC +L A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+ +++ PD F+ L++ LC E +V EA ++ M++ G KP ++T ++L++G CL
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+V+ A + + M P+ +Y ++N +CK A+ L ++M NI + V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
YS +IDGLCK G + +A+ L NEM +G ++ITY++L+ C D+ L++ M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I PNV T+++L+D K G+L++A ++ ++++ +G + TY +I+G CK+ +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
EA+ ++ M GC P+ +T+ I+I + D +L R+M RG++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 185/330 (56%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+DA +L+ +M+ R P V+ + L S Q + + L QM K I +YT SI
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
+++ C+ K+ A + + ++K G +PD V +++L++G CL V++A ++ + M M
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
P + + + ++NGLC V DA+ L +M PN VTY +++ +CKSG+ + A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
EL+ +M R + + + YS ++D LCK+ +DNA +L +M+ +G ++ TY L+ G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
C GR D ++ +D++ + + +V T++++I+ K+G EA L+ +M G PN
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+TY +I ++ ++A +++ MI++G
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 246/424 (58%), Gaps = 20/424 (4%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I++F+K + + K+K+Y ISL M+ + DL+++NI+INC C + A
Sbjct: 64 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 62 FSVLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDS 104
SV+ + K GY+PD +T +++I K++ +PDVV+Y+TIID
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
CK LVNDA L+ M + D VTY +L++G C G+ +A L+ MV++ I P+
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V TF+ ++D KEGK EA + M + PDV TY+SL++G C+ V++A+ + +
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M PDV +Y+ +ING CK K VD+ LF++M + + +TY+++I G ++G
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
R A E+ + M SR PN+ TYS LL LC N V+ A+ L + M+ I ++ TY
Sbjct: 364 RPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
I++ G+CK G ++DA ++F+ L KG DV +YT MI+G C+ +D++ L KM+++
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 405 GCTP 408
G P
Sbjct: 481 GLLP 484
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 190/324 (58%)
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
+L+ +M+ R P +V ++ ++S + L + M + I D+Y+++I+++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
C+ + A +V+ M+K G +PDVVT SSL++G+C N V A D+ + M M PDV
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
Y+ +I+G CKI +V+DA+ LF +M + + + VTY+SL+ GLC SGR SDA L+ +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M R + PNVIT+++++D K A+ L ++M + + P+V+TY L++GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEI 415
+ +A+++ ++ KG DV TY +ING CK DE L +M G + +TY
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 416 IIYALFQKGDNDKAEKLLRQMIAR 439
II FQ G D A+++ +M +R
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 203/381 (53%), Gaps = 32/381 (8%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P +V +S ++ + K K + +L+ M I D+ +Y +I+ C + A+ +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+ +M+ PDV T S L++ C+ +V +A ++++ M + G +PDVV Y++++DG C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ VN A ++F+ M R + D +Y+ ++ GLC DA L + M +I PNV+T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
++++ID K G+ S+A +L EM R + P+V TY+SL++ LC + VD A ++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL--------------LIKGY------- 371
+G LP+V TY L++G CK R+ + ++F+++ +I+GY
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 372 -----------NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
++RTY+I++ GLC + ++AL L M+ + + TY I+I+ +
Sbjct: 367 AAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 421 FQKGDNDKAEKLLRQMIARGL 441
+ G+ + A L R + +GL
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGL 447
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 298 bits (762), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 250/428 (58%), Gaps = 19/428 (4%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
+P P I++F + T+ + Y T I SQ+M+ + DL++F ILI+C+C +++ A
Sbjct: 66 QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFA 125
Query: 62 FSVLCNIFKRGYQPDTITFNTII-------KIQGKLA----------QPDVVMYSTIIDS 104
SVL + K GY+P +TF +++ +I + +P+VV+Y+T+ID
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LCK+ +N A L +EM K + DVVTY TL++G C G+ +A +L M+ +SINPD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V TF+ L+D K+G + EA+ + MI+ P+ VTY+S+++G C+ + A+ F+
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M P+V +Y+ +I+G CK +MVD+ + LF++M E ++ TY++LI G C+ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
++ A ++ M SR + P++IT+ LL LC N +++A+ M+ + Y
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
I++ GLCK +++ A E+F L ++G D RTYTIMI GLCK+G EA L+ +M++
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 405 G--CTPNA 410
G C NA
Sbjct: 486 GIICQMNA 493
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 240/499 (48%), Gaps = 66/499 (13%)
Query: 25 TAISLSQQMDFRRVM-PDLFTFNI-----------LINCYCHLGQITSAFSVLCNIFKRG 72
T I+ S FRRV+ P+L L + H + AF++ +
Sbjct: 7 TGIATSTAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQ 66
Query: 73 YQPDTITFNTIIKIQGKLAQPDVVMY-----------------STIIDSLCKDKLVNDAY 115
P + F ++ L + + V+Y + +I C+ ++ A
Sbjct: 67 PLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFAL 126
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
++ +M+ P +VT+ +L+ GFC+V ++ +A L+ MV P+V ++ L+D L
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
CK G++ A +L M K G DVVTY++L+ G C + A + M + + PDV
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
+++ +I+ K +D+A L+K+M ++ PN VTY+S+I+GLC GR+ DA + +
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M S+G PNV+TY++L+ CK VD + L ++M +G +++TY L+ G C+ G+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 356 LKDAQEVFQDLLIKGYNLDVRT-----------------------------------YTI 380
L+ A ++F ++ + D+ T Y I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
MI+GLCK ++A L ++ G P+A TY I+I L + G +A++L+R+M G
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Query: 441 LLTGLFYATEFEAVEELSA 459
++ + E + +EE S+
Sbjct: 487 IICQM--NAEDDHLEEHSS 503
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 275/528 (52%), Gaps = 90/528 (17%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINC---------- 51
RP P I+EFNK +++ K + ISL +QM + DL+T++I INC
Sbjct: 78 RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 52 -------------------------YCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-- 84
YCH +I+ A +++ + + GY+PDT TF T+I
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 85 --------------------------------------------------KIQGKLAQPD 94
K++ + +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
VV+++TIIDSLCK + V A +L++EM K I P+VVTY +LI+ C G+ +A LL+
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
M+ K INP+V TF+ L+DA KEGK+ EA+ + MI+ PD +TY+ L++G+C+ N
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+++A+ +F M + P++Q+Y+ +ING CK K V+D + LF++M + N VTY+
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
++I G ++G A + +M S +P +++TYS LL LC +D A+ + K ++
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
+ N++ Y +++G+CK G++ +A ++F L IK DV TY MI+GLC L EA
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP---DVVTYNTMISGLCSKRLLQEA 554
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
L KM+++G PN+ TY +I A + D + +L+++M + G +
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV 602
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 211/394 (53%), Gaps = 22/394 (5%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R ++ FN SL K +H A+ L +M+ + + P++ T+N LINC C+ G+ + A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+L N+ ++ P+ +TFN +I D+ K+ + +A L+ EM
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALI------------------DAFFKEGKLVEAEKLHEEM 354
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ + I PD +TY LI+GFC+ +L EA + MV K P++ T++ L++ CK +V
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
++ + M + G + VTY++++ G+ + + A+ +F M + D+ +YSI+
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
++GLC +D AL +FK + + N+ Y+++I+G+CK+G++ +AW+L S +
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSI 531
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE 361
P+V+TY++++ LC + A L +KMK G LPN TY L+ + + E
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Query: 362 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
+ +++ G+ D T +++ N L DG D++
Sbjct: 592 LIKEMRSSGFVGDASTISLVTNML-HDGRLDKSF 624
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 189/332 (56%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
V+DA +L+ +M+ R P +V + L+S + + + + L QM I+ D+YT+SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
++ C+ ++ A VLA M+K G +PD+VT SSL++GYC ++ A + + M M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
PD +++ +I+GL +A+ L QM P++VTY ++++GLCK G I A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
L+N+M + + NV+ +++++D+LCK HV+ A+ L +M+ +GI PNV TY L++ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
C GR DA + ++L K N +V T+ +I+ K+G EA L +M P+
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+TY ++I D+A+++ + M+++ L
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 185/356 (51%), Gaps = 14/356 (3%)
Query: 86 IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
+QG P V + + S C ++ A Y E+L R+S D++ +
Sbjct: 18 LQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLS-DII-------------K 63
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
+ +AV L MV P + F+ L+ A+ K K + ++ M G D+ TYS
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
++ +C ++++ A + M ++ PD+ + S ++NG C K + DA+ L QM
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
P+ T+++LI GL + S+A LV++M RG P+++TY ++++ LCK +D A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
+L+ KM+ I NV + ++D LCK ++ A ++F ++ KG +V TY +IN L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
C G + +A L+S M + PN VT+ +I A F++G +AEKL +MI R +
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 284 bits (727), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 270/493 (54%), Gaps = 53/493 (10%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I+EF+K +++ K + ISL +QM + +L+T++I IN +C Q++ A
Sbjct: 70 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLA 129
Query: 62 FSVLCNIFK-----------------------------------RGYQPDTITFNTII-- 84
++L + K GYQPDT+TF T++
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189
Query: 85 ---------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
++ K QPD+V Y +I+ LCK + A NL ++M +I D
Sbjct: 190 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VV Y T+I G C + +A L N+M K I PDV+T++ L+ LC G+ +A +L+
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA-PDVQSYSIMINGLCKI 248
M++ PD+V +++L+D + ++ +AE +++ M + + PDV +Y+ +I G CK
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 249 KMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 308
K V++ + +F++M + N VTY++LI G ++ +A + +M S G+ P+++TY
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
+ LLD LC N +V+ A+ + + M+ + + ++ TYT +++ LCK G+++D ++F L +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
KG +V TYT M++G C+ GL +EA AL +M+++G PN+ TY +I A + GD
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 429 AEKLLRQMIARGL 441
+ +L+++M + G
Sbjct: 550 SAELIKEMRSCGF 562
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 190/371 (51%), Gaps = 36/371 (9%)
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+D ++DA L+ +M+ R P +V ++ L+S + + + L QM I+ ++Y
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T+SI ++ C+ ++ A +L M+K G P +VT +SL++G+C N +++A + + M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
M PD +++ +++GL + +A+ L ++M + P++VTY ++I+GLCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
A L+N+M + +V+ Y++++D LCK H+D+A L KM+ +GI P+V+TY L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYN---------------------------------- 372
+ LC GR DA + D+L K N
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 373 --LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
DV Y +I G CK +E + + +M G N VTY +I+ FQ D D A+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 431 KLLRQMIARGL 441
+ +QM++ G+
Sbjct: 412 MVFKQMVSDGV 422
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 124/232 (53%)
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+++ A +F M + P + +S +++ + K+ D ++L +QM I+ N+ TYS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
I+ C+ ++S A ++ +M G P+++T +SLL+ C + + A++L+ +M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
G P+ T+T L+ GL + + +A + + +++KG D+ TY +INGLCK G D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
L L++KME + V Y II L + D A L +M +G+ +F
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 251/450 (55%), Gaps = 22/450 (4%)
Query: 14 FTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGY 73
F +V+T + A++L QM + P + TFN LIN C G++ A +++ + +G
Sbjct: 199 FGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 74 QPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYN 116
D +T+ TI+ K++ +PDVV+YS IID LCKD +DA
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 117 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALC 176
L+SEML K I+P+V TY +I GFC G+ +A LL M+ + INPDV TF+ L+ A
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 177 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 236
KEGK+ EA+ + M+ PD VTY+S++ G+C N + A+ +F+ M +PDV
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVV 433
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+++ +I+ C+ K VD+ + L +++ + N TY++LI G C+ ++ A +L EM
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
S G+ P+ IT + LL C+N ++ A+ L + ++ I + Y I++ G+CKG ++
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
+A ++F L I G DV+TY +MI+G C +A L KM+DNG P+ TY +
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 417 IYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
I + G+ DK+ +L+ +M + G F
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 252/472 (53%), Gaps = 36/472 (7%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP ++ NK V+ AISL ++M+ RR+ ++++FNILI C+C +++ +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 62 FSVLCNIFKRGYQPDTITFNTII-------KIQGKLA----------------------- 91
S + K G+QPD +TFNT++ +I LA
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 92 --QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
P V+ ++T+I+ LC + V +A L ++M+ K + DVVTY T+++G C +G K A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
+ LL++M I PDV +S ++D LCK+G +A+ + + M++ G P+V TY+ ++DG
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+C + A+ + M E+ PDV +++ +I+ K + +A L +M I P+
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
VTY+S+I G CK R DA + + M S P+V+T+++++D C+ VD + L++
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
++ +G++ N TY L+ G C+ L AQ++FQ+++ G D T I++ G C++
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+EAL L ++ + + V Y III+ + + D+A L + G+
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 197/383 (51%), Gaps = 22/383 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ ++ L K H++ A L +M + + P++FT+N +I+ +C G+ + A +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L ++ +R PD +TFN +I K+ + +A L EML +
Sbjct: 354 LRDMIEREINPDVLTFNALISAS------------------VKEGKLFEAEKLCDEMLHR 395
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
I PD VTY ++I GFC + +A + + M +PDV TF+ ++D C+ +V E
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 451
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+L + + G + TY++L+ G+C V+ +N A+D+F M + PD + +I++ G
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
C+ + +++AL LF+ + I + V Y+ +I G+CK ++ +AW+L + G+ P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
V TY+ ++ C + +A L KMK G P+ TY L+ G K G + + E+
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 365 DLLIKGYNLDVRTYTIMINGLCK 387
++ G++ D T + +C+
Sbjct: 632 EMRSNGFSGDAFTIKMAEEIICR 654
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 190/378 (50%), Gaps = 37/378 (9%)
Query: 81 NTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF 140
N +I + ++ +PDV A +LY +M +RI ++ ++ LI F
Sbjct: 110 NKVIGVFVRMNRPDV------------------AISLYRKMEIRRIPLNIYSFNILIKCF 151
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE---- 196
C +L ++ ++ PDV TF+ L+ LC E ++ EA + M++ G
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 197 -----------KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
P V+T+++L++G CL V +A + N M L DV +Y ++NG+
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
CK+ ALNL +M +I P+VV YS++ID LCK G SDA L +EM +G+ PNV
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
TY+ ++D C +A L++ M + I P+V T+ L+ K G+L +A+++ +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
+L + D TY MI G CK FD+A + M +P+ VT+ II +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKR 447
Query: 426 NDKAEKLLRQMIARGLLT 443
D+ +LLR++ RGL+
Sbjct: 448 VDEGMQLLREISRRGLVA 465
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 185/350 (52%), Gaps = 15/350 (4%)
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
K ++DA + + M+ R V +I F + + A+ L +M ++ I ++Y+F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA--------- 219
+IL+ C K+ + + + K G +PDVVT+++L+ G CL + +++A
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 220 ------EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+F+ M + L P V +++ +INGLC V +A L +M + + +VVTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
++++G+CK G A L+++M + P+V+ YS+++D LCK+ H +A L +M
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
+GI PNV+TY ++DG C GR DAQ + +D++ + N DV T+ +I+ K+G E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
A L +M P+ VTY +IY + D A+ + M + ++T
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT 434
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 15/256 (5%)
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
L G ++ A D F+ M R + +I ++ D A++L+++M
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
I N+ +++ LI C ++S + ++ G P+V+T+++LL LC + A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 326 SLIKKMKHQGIL---------------PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
+L M G L P V T+ L++GLC GR+ +A + ++ KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 371 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
++DV TY ++NG+CK G AL L+SKME+ P+ V Y II L + G + A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 431 KLLRQMIARGLLTGLF 446
L +M+ +G+ +F
Sbjct: 317 YLFSEMLEKGIAPNVF 332
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 52/243 (21%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ FN + K + L +++ R ++ + T+N LI+ +C + + +A
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 64 VLCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLC 106
+ + G PDTIT N ++ IQ D V Y+ II +C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 107 KDKLVNDAYNLYSEMLAKRISPDV-----------------------------------V 131
K V++A++L+ + + PDV
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
TY TLI G G++ +++ L+++M + D +T + + +C+ + +N L
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPK 668
Query: 192 IKG 194
I G
Sbjct: 669 ING 671
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 250/446 (56%), Gaps = 22/446 (4%)
Query: 13 FFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRG 72
F +V+T + A++L QM + P + TFN LIN C G++ A +++ + +G
Sbjct: 198 LFGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 73 YQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAY 115
D +T+ TI+ K++ +PDVV+YS IID LCKD +DA
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
L+SEML K I+P+V TY +I GFC G+ +A LL M+ + INPDV TF+ L+ A
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
KEGK+ EA+ + M+ PD VTY+S++ G+C N + A+ +F+ M +PDV
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDV 432
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
+++ +I+ C+ K VD+ + L +++ + N TY++LI G C+ ++ A +L E
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M S G+ P+ IT + LL C+N ++ A+ L + ++ I + Y I++ G+CKG +
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEI 415
+ +A ++F L I G DV+TY +MI+G C +A L KM+DNG P+ TY
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 416 IIYALFQKGDNDKAEKLLRQMIARGL 441
+I + G+ DK+ +L+ +M + G
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 252/472 (53%), Gaps = 36/472 (7%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP ++ NK V+ AISL ++M+ RR+ ++++FNILI C+C +++ +
Sbjct: 101 RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 62 FSVLCNIFKRGYQPDTITFNTII-------KIQGKLA----------------------- 91
S + K G+QPD +TFNT++ +I LA
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 92 --QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
P V+ ++T+I+ LC + V +A L ++M+ K + DVVTY T+++G C +G K A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
+ LL++M I PDV +S ++D LCK+G +A+ + + M++ G P+V TY+ ++DG
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+C + A+ + M E+ PDV +++ +I+ K + +A L +M I P+
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
VTY+S+I G CK R DA + + M S P+V+T+++++D C+ VD + L++
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
++ +G++ N TY L+ G C+ L AQ++FQ+++ G D T I++ G C++
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+EAL L ++ + + V Y III+ + + D+A L + G+
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 204/397 (51%), Gaps = 29/397 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ ++ L K H++ A L +M + + P++FT+N +I+ +C G+ + A +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 65 LCNIFKRGYQPDTITFNTIIKI---QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
L ++ +R PD +TFN +I +GKL + A L EM
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFE---------------------AEKLCDEM 392
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
L + I PD VTY ++I GFC + +A + + M +PDV TF+ ++D C+ +V
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRV 448
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
E +L + + G + TY++L+ G+C V+ +N A+D+F M + PD + +I+
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
+ G C+ + +++AL LF+ + I + V Y+ +I G+CK ++ +AW+L + G+
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE 361
P+V TY+ ++ C + +A L KMK G P+ TY L+ G K G + + E
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 362 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
+ ++ G++ D T M+ L DG D++ + M
Sbjct: 629 LISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFSDM 664
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 190/378 (50%), Gaps = 37/378 (9%)
Query: 81 NTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF 140
N +I + ++ +PDV A +LY +M +RI ++ ++ LI F
Sbjct: 110 NKVIGVFVRMNRPDV------------------AISLYRKMEIRRIPLNIYSFNILIKCF 151
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE---- 196
C +L ++ ++ PDV TF+ L+ LC E ++ EA + M++ G
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 197 -----------KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
P V+T+++L++G CL V +A + N M L DV +Y ++NG+
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
CK+ ALNL +M +I P+VV YS++ID LCK G SDA L +EM +G+ PNV
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
TY+ ++D C +A L++ M + I P+V T+ L+ K G+L +A+++ +
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
+L + D TY MI G CK FD+A + M +P+ VT+ II +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKR 447
Query: 426 NDKAEKLLRQMIARGLLT 443
D+ +LLR++ RGL+
Sbjct: 448 VDEGMQLLREISRRGLVA 465
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 185/350 (52%), Gaps = 15/350 (4%)
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
K ++DA + + M+ R V +I F + + A+ L +M ++ I ++Y+F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA--------- 219
+IL+ C K+ + + + K G +PDVVT+++L+ G CL + +++A
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 220 ------EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+F+ M + L P V +++ +INGLC V +A L +M + + +VVTY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
++++G+CK G A L+++M + P+V+ YS+++D LCK+ H +A L +M
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
+GI PNV+TY ++DG C GR DAQ + +D++ + N DV T+ +I+ K+G E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
A L +M P+ VTY +IY + D A+ + M + ++T
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT 434
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 15/256 (5%)
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
L G ++ A D F+ M R + +I ++ D A++L+++M
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
I N+ +++ LI C ++S + ++ G P+V+T+++LL LC + A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 326 SLIKKMKHQGIL---------------PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
+L M G L P V T+ L++GLC GR+ +A + ++ KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 371 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
++DV TY ++NG+CK G AL L+SKME+ P+ V Y II L + G + A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 431 KLLRQMIARGLLTGLF 446
L +M+ +G+ +F
Sbjct: 317 YLFSEMLEKGIAPNVF 332
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 250/430 (58%), Gaps = 17/430 (3%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
RP P I++F + T + K + I L +M+ + DL++F ILI+C+C +++ A
Sbjct: 74 RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLA 133
Query: 62 FSVLCNIFKRGYQPDTITFNTIIK--IQGKLAQ---------------PDVVMYSTIIDS 104
++L + K G++P +T +++ QG Q P+VV+Y+T+I+
Sbjct: 134 LALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 193
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LCK++ +N+A ++ M K I D VTY TLISG G+ +A LL MV + I+P+
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V F+ L+D KEG + EA+N+ MI+ P+V TY+SL++G+C+ + A+ +F+
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M PDV +Y+ +I G CK K V+D + LF +M + + + TY++LI G C++G
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+++ A ++ N M G+ P+++TY+ LLD LC N ++ A+ +++ ++ + ++ TY
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
I++ GLC+ +LK+A +F+ L KG D Y MI+GLC+ GL EA L +M+++
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 405 GCTPNAVTYE 414
G P+ Y+
Sbjct: 494 GFMPSERIYD 503
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 214/405 (52%), Gaps = 17/405 (4%)
Query: 54 HLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMY--------------- 98
H + AFS+ C + + P + F ++ + K+ + D+V+Y
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115
Query: 99 --STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
+ +I C+ ++ A L +M+ P +VT +L++GFC + +EAV L++ M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
P+V ++ +++ LCK + A V M K G + D VTY++L+ G
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
A + M + ++ P+V ++ +I+ K + +A NL+K+M ++ PNV TY+SL
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I+G C G + DA + + M S+G P+V+TY++L+ CK+ V++ + L +M +QG+
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
+ + +TY L+ G C+ G+L AQ+VF ++ G + D+ TY I+++ LC +G ++AL
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ ++ + + +TY III L + +A L R + +G+
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 174/342 (50%), Gaps = 21/342 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ +N L K + A+ + M+ + + D T+N LI+ + G+ T A +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 65 LCNIFKRGYQPDTITFNTIIKI---QGKLAQ--------------PDVVMYSTIIDSLCK 107
L ++ KR P+ I F +I +G L + P+V Y+++I+ C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ DA ++ M++K PDVVTY TLI+GFC ++++ + L +M + + D +T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+ C+ GK+ A+ V M+ G PD+VTY+ L+D C ++ KA + +
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ E+ D+ +Y+I+I GLC+ + +A LF+ + + + P+ + Y ++I GLC+ G
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
+A +L M G P+ Y L ++H+ + LIK
Sbjct: 482 EADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIK 519
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%)
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
DDA +LF +M P++V ++ ++ + K + L ++M + G+ ++ +++ L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+ C+ + A++L+ KM G P++ T LL+G C+G R ++A + + G+
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEK 431
+V Y +INGLCK+ + AL + ME G +AVTY +I L G A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 432 LLRQMIARGLLTGLFYAT 449
LLR M+ R + + + T
Sbjct: 241 LLRDMVKRKIDPNVIFFT 258
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 247/448 (55%), Gaps = 18/448 (4%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N SL + + +M +V P+++T+N ++N YC LG + A + I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 70 KRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDKLVN 112
+ G PD T+ ++I ++ K + + V Y+ +I LC + ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
+A +L+ +M P V TYT LI C + EA+ L+ +M I P+++T+++L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
D+LC + K ++A+ +L M++ G P+V+TY++L++GYC + A D+ M +L+
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
P+ ++Y+ +I G CK V A+ + +M + P+VVTY+SLIDG C+SG A+ L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
++ M+ RGL P+ TY+S++D+LCK+ V+ A L ++ +G+ PNV YT L+DG CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
G++ +A + + +L K + T+ +I+GLC DG EA L KM G P T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMIARG 440
I+I+ L + GD D A +QM++ G
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 238/459 (51%), Gaps = 18/459 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +NK K + A ++ + PD FT+ LI YC + SAF V
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ +G + + + + +I K++ P V Y+ +I SLC
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ ++A NL EM I P++ TYT LI C + ++A LL QM+ K + P+V T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L++ CK G +++A +V+ +M P+ TY+ L+ GYC N V+KA + N M
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
++ PDV +Y+ +I+G C+ D A L M+ + P+ TY+S+ID LCKS R+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+A +L + + +G+ PNV+ Y++L+D CK VD A +++KM + LPN T+ L+
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
GLC G+LK+A + + ++ G V T TI+I+ L KDG FD A + +M +G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
P+A TY I ++G AE ++ +M G+ LF
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 239/453 (52%), Gaps = 26/453 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + SL ++ + A++L ++M+ + P++ T+ +LI+ C + A +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L + ++G P+ IT+N +I + CK ++ DA ++ M ++
Sbjct: 381 LGQMLEKGLMPNVITYNALI------------------NGYCKRGMIEDAVDVVELMESR 422
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
++SP+ TY LI G+C + +A+G+LN+M+ + + PDV T++ L+D C+ G A
Sbjct: 423 KLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+L++M G PD TY+S++D C V +A D+F+++ + + P+V Y+ +I+G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
CK VD+A + ++M ++N PN +T+++LI GLC G++ +A L +M GL P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
V T + L+ L K+ D+A S ++M G P+ +TYT + C+ GRL DA+++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+ G + D+ TY+ +I G G + A ++ +M D GC P+ T+ +I L +
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM- 720
Query: 425 DNDKAEKLLRQMIARGLLTGLFYATEFEAVEEL 457
K +Q + L + EF+ V EL
Sbjct: 721 ------KYGKQKGSEPELCAMSNMMEFDTVVEL 747
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 197/344 (57%), Gaps = 1/344 (0%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y+T+++SL + LV++ +Y EML ++ P++ TY +++G+C +G ++EA ++++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
++PD +T++ L+ C+ + A V M G + + V Y+ L+ G C+ ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+A D+F M E P V++Y+++I LC + +ALNL K+M I PN+ TY+ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
D LC + A EL+ +M +GL PNVITY++L++ CK +++A+ +++ M+ + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
PN TY L+ G CK + A V +L + DV TY +I+G C+ G FD A L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+S M D G P+ TY +I +L + ++A L + +G+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 231/485 (47%), Gaps = 72/485 (14%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP +N+ K+ + A+ + +M R+V+PD+ T+N LI+ C G SA+
Sbjct: 425 SPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
+L + RG PD T+ ++I ++ K P+VVMY+ +ID C
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA---------VGL----- 152
K V++A+ + +ML+K P+ +T+ LI G C G+LKEA +GL
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Query: 153 ---------------------LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
QM+ PD +T++ + C+EG++ +A++++A M
Sbjct: 604 TDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM- 250
+ G PD+ TYSSL+ GY + + N A D+ M P ++ +I L ++K
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 251 -----------------VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
D + L ++M ++TPN +Y LI G+C+ G + A ++
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVF 783
Query: 294 NEMH-SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
+ M + G+ P+ + +++LL CK + A ++ M G LP + + +L+ GL K
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK 843
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
G + VFQ+LL GY D + I+I+G+ K GL + L + ME NGC ++ T
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903
Query: 413 YEIII 417
Y ++I
Sbjct: 904 YSLLI 908
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 229/472 (48%), Gaps = 37/472 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I +N K A+ + + M+ R++ P+ T+N LI YC + A V
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGV 449
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
L + +R PD +T+N++I Q + PD Y+++IDSLCK
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K V +A +L+ + K ++P+VV YT LI G+C G++ EA +L +M+ K+ P+ T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
F+ L+ LC +GK+KEA + M+K G +P V T + L+ + + A F M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
PD +Y+ I C+ + DA ++ +M ++P++ TYSSLI G G+ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLD------------------ALCKNHHVDNAISLIK 329
A++++ M G P+ T+ SL+ A+ D + L++
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI-KGYNLDVRTYTIMINGLCKD 388
KM + PN +Y L+ G+C+ G L+ A++VF + +G + + +++ CK
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+EA ++ M G P + +++I L++KG+ ++ + + ++ G
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 145/440 (32%), Positives = 235/440 (53%), Gaps = 52/440 (11%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYC-------- 53
RP P IIEF+K +++ K + IS ++M+ + +L+T+NILINC+C
Sbjct: 73 RPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLA 132
Query: 54 ---------------------------HLGQITSAFSVLCNIFKRGYQPDTITFNTII-- 84
H +I+ A +++ + + GY+PDT+TF T+I
Sbjct: 133 LALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Query: 85 ---------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
++ + QPD+V Y +++ LCK + A NL ++M A +I +
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VV Y+T+I C +A+ L +M K + P+V T+S L+ LC G+ +A +L+
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
MI+ P++VT+S+L+D + ++ KAE ++ M + + P++ +YS +ING C +
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ +A + + M ++ PNVVTY++LI+G CK+ R+ EL EM RGL N +TY+
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 432
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+L+ + DNA + K+M G+ PN+ TY ILLDGLCK G+L A VF+ L
Sbjct: 433 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 492
Query: 370 GYNLDVRTYTIMINGLCKDG 389
D+ TY IMI G+CK G
Sbjct: 493 TMEPDIYTYNIMIEGMCKAG 512
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 217/384 (56%), Gaps = 17/384 (4%)
Query: 75 PDTITFNTIIKIQGKLAQPDVVM-----------------YSTIIDSLCKDKLVNDAYNL 117
P I F+ ++ K+ + D+V+ Y+ +I+ C+ ++ A L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 118 YSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCK 177
+M+ PD+VT +L++GFC ++ +AV L++QMV PD TF+ L+ L
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQS 237
K EA ++ M++ G +PD+VTY ++++G C + + A ++ N M ++ +V
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
YS +I+ LCK + DDALNLF +M + + PNV+TYSSLI LC GR SDA L+++M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLK 357
R + PN++T+S+L+DA K + A L ++M + I PN++TY+ L++G C RL
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
+A+++ + ++ K +V TY +ING CK D+ + L +M G N VTY +I
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 418 YALFQKGDNDKAEKLLRQMIARGL 441
+ FQ D D A+ + +QM++ G+
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGV 459
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 201/369 (54%), Gaps = 4/369 (1%)
Query: 78 ITFNTIIKIQGKLAQ----PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTY 133
I + I + G +AQ P ++ +S ++ ++ K + + +M IS ++ TY
Sbjct: 57 IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 116
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
LI+ FC +L A+ LL +M+ PD+ T + L++ C ++ +A ++ M++
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 194 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
G KPD VT+++L+ G L N+ ++A + + M + PD+ +Y ++NGLCK D
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
ALNL +M I NVV YS++ID LCK DA L EM ++G+ PNVITYSSL+
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
LC +A L+ M + I PN+ T++ L+D K G+L A++++++++ + +
Sbjct: 297 CLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
++ TY+ +ING C EA ++ M C PN VTY +I + DK +L
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 434 RQMIARGLL 442
R+M RGL+
Sbjct: 417 REMSQRGLV 425
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 174/349 (49%), Gaps = 35/349 (10%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y ++ + D ++DA L+ M R P ++ ++ L+S + + + +M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
+ I+ ++YT++IL++ C+ ++ A +L M+K G +PD+VT +SL
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL----------- 154
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+NG C + DA+ L QM P+ VT+++LI
Sbjct: 155 ------------------------LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
GL + S+A L++ M RG P+++TY ++++ LCK D A++L+ KM+ I
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
NV Y+ ++D LCK DA +F ++ KG +V TY+ +I+ LC G + +A L
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
+S M + PN VT+ +I A +KG KAEKL +MI R + +F
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 253/454 (55%), Gaps = 23/454 (5%)
Query: 6 PIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVL 65
P + F L KT+ A + + ++ +PD+ T+N++I+ YC G+I +A SVL
Sbjct: 139 PCTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 66 CNIFKRGYQPDTITFNTIIKI---QGKLAQ--------------PDVVMYSTIIDSLCKD 108
+ PD +T+NTI++ GKL Q PDV+ Y+ +I++ C+D
Sbjct: 196 ---DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
V A L EM + +PDVVTY L++G C G+L EA+ LN M P+V T
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
+I++ ++C G+ +A+ +LA M++ G P VVT++ L++ C + +A DI M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 229 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
P+ SY+ +++G CK K +D A+ ++M + P++VTY++++ LCK G++ D
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A E++N++ S+G P +ITY++++D L K AI L+ +M+ + + P+ TY+ L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
GL + G++ +A + F + G + T+ ++ GLCK D A+ + M + GC P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 409 NAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
N +Y I+I L +G +A +LL ++ +GL+
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 246/483 (50%), Gaps = 28/483 (5%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
+E N +V+T + M + +PD+ LI +C LG+ A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQ--------------PDVVMYSTIIDSLCKDKLVND 113
+ G PD IT+N +I K + PDVV Y+TI+ SLC +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 114 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVD 173
A + ML + PDV+TYT LI C + A+ LL++M + PDV T+++LV+
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 174 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
+CKEG++ EA L M G +P+V+T++ ++ C AE + M R +P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
V +++I+IN LC+ ++ A+++ ++M PN ++Y+ L+ G CK ++ A E +
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
M SRG P+++TY+++L ALCK+ V++A+ ++ ++ +G P + TY ++DGL K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G+ A ++ ++ K D TY+ ++ GL ++G DEA+ + E G PNAVT+
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 414 EIIIYALFQKGDNDKAEKLLRQMIARG----------LLTGLFY---ATE-FEAVEELSA 459
I+ L + D+A L MI RG L+ GL Y A E E + EL
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 460 PGL 462
GL
Sbjct: 583 KGL 585
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 219/405 (54%), Gaps = 18/405 (4%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M SP ++ +N SL + A+ + +M R PD+ T+ ILI C +
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
A +L + RG PD +T+N +++ +CK+ +++A ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYN------------------VLVNGICKEGRLDEAIKFLND 299
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M + P+V+T+ ++ C G+ +A LL M+ K +P V TF+IL++ LC++G
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+ A ++L M + G +P+ ++Y+ L+ G+C ++++A + M PD+ +Y+
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
M+ LCK V+DA+ + Q+ ++ +P ++TY+++IDGL K+G+ A +L++EM ++
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
L P+ ITYSSL+ L + VD AI + + GI PN T+ ++ GLCK + A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
+ ++ +G + +YTI+I GL +G+ EAL L++++ + G
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 264 bits (675), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 253/471 (53%), Gaps = 32/471 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + +N + A++L +M+ + +P++ T+N LI+ YC L +I F
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 64 VLCNIFKRGYQPDTITFNTIIK---IQGKLAQP--------------DVVMYSTIIDSLC 106
+L ++ +G +P+ I++N +I +G++ + D V Y+T+I C
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K+ + A +++EML ++P V+TYT+LI C G + A+ L+QM ++ + P+
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ LVD ++G + EA VL M G P VVTY++L++G+C+ ++ A + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
L+PDV SYS +++G C+ VD+AL + ++M + I P+ +TYSSLI G C+ R
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A +L EM GLPP+ TY++L++A C ++ A+ L +M +G+LP+V TY++L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 347 LDGLCKGGRLKDAQEV---------------FQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
++GL K R ++A+ + + L+ N++ ++ +I G C G+
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
EA + M P+ Y I+I+ + GD KA L ++M+ G L
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Score = 258 bits (658), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 253/434 (58%), Gaps = 19/434 (4%)
Query: 5 PPIIEFNKFFTSLVKTK-HYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P ++ +N + +++K + + A ++ ++M +V P++FT+NILI +C G I A +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ K++ K P+VV Y+T+ID CK + ++D + L M
Sbjct: 227 LF------------------DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K + P++++Y +I+G C G++KE +L +M + + D T++ L+ CKEG +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A + A M++ G P V+TY+SL+ C +N+A + + M L P+ ++Y+ +++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
G + +++A + ++M+ +P+VVTY++LI+G C +G++ DA ++ +M +GL P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+V++YS++L C+++ VD A+ + ++M +GI P+ TY+ L+ G C+ R K+A +++
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+++L G D TYT +IN C +G ++AL L ++M + G P+ VTY ++I L ++
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 424 GDNDKAEKLLRQMI 437
+A++LL ++
Sbjct: 569 SRTREAKRLLLKLF 582
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 236/438 (53%), Gaps = 18/438 (4%)
Query: 23 YATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNT 82
YA+ + S Q + F++++ Y L I A S++ G+ P +++N
Sbjct: 115 YASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNA 174
Query: 83 II--KIQGKL----------------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
++ I+ K P+V Y+ +I C ++ A L+ +M K
Sbjct: 175 VLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
P+VVTY TLI G+C + ++ + LL M LK + P++ +++++++ LC+EG++KE
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
VL M + G D VTY++L+ GYC ++A + M R L P V +Y+ +I+
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
+CK ++ A+ QM + PN TY++L+DG + G +++A+ ++ EM+ G P+
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
V+TY++L++ C +++AI++++ MK +G+ P+V +Y+ +L G C+ + +A V +
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+++ KG D TY+ +I G C+ EA L +M G P+ TY +I A +G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 425 DNDKAEKLLRQMIARGLL 442
D +KA +L +M+ +G+L
Sbjct: 535 DLEKALQLHNEMVEKGVL 552
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 233/452 (51%), Gaps = 32/452 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ +N K + L + M + + P+L ++N++IN C G++ V
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQ--------------PDVVMYSTIIDSLCK 107
L + +RGY D +T+NT+IK +G Q P V+ Y+++I S+CK
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+N A +M + + P+ TYTTL+ GF G + EA +L +M +P V T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L++ C GK+++A VL M + G PDVV+YS+++ G+C +V++A + M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ PD +YS +I G C+ + +A +L+++M + P+ TY++LI+ C G +
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A +L NEM +G+ P+V+TYS L++ L K A L+ K+ ++ +P+ TY L+
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 348 D---------------GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ G C G + +A +VF+ +L K + D Y IMI+G C+ G
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+A L +M +G + VT ++ AL ++G
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 177/357 (49%), Gaps = 32/357 (8%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P +I + S+ K + A+ QM R + P+ T+ L++ + G + A+
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 64 VLCNIFKRGYQPDTITFNTIIK---IQGKLA--------------QPDVVMYSTIIDSLC 106
VL + G+ P +T+N +I + GK+ PDVV YST++ C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ V++A + EM+ K I PD +TY++LI GFC + KEA L +M+ + PD +
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ L++A C EG +++A + M++ G PDVVTYS L++G + +A+ + +
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 227 TRMELAP-DVQSYSI--------------MINGLCKIKMVDDALNLFKQMHTENITPNVV 271
E P DV +++ +I G C M+ +A +F+ M +N P+
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGT 641
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
Y+ +I G C++G I A+ L EM G + +T +L+ AL K V+ S+I
Sbjct: 642 AYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 178/346 (51%), Gaps = 32/346 (9%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII- 84
A + ++M+ P + T+N LIN +C G++ A +VL ++ ++G PD ++++T++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 85 ------------KIQGKLAQ----PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
+++ ++ + PD + YS++I C+ + +A +LY EML + P
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
D TYT LI+ +C+ G L++A+ L N+MV K + PDV T+S+L++ L K+ + +EAK +L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 189 AVMIKGGEKPDVVTYS---------------SLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
+ P VTY SL+ G+C+ + +A+ +F +M P
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKP 638
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
D +Y+IMI+G C+ + A L+K+M + VT +L+ L K G++++ ++
Sbjct: 639 DGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
+ L++ + ++D + ++ +M G LPN
Sbjct: 699 VHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 139/338 (41%), Gaps = 71/338 (21%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ +N T AI++ + M + + PD+ +++ +++ +C + A
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQ-------------------PDVVMYSTIIDS 104
V + ++G +PDTIT++++I QG Q PD Y+ +I++
Sbjct: 472 VKREMVEKGIKPDTITYSSLI--QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYT------------------------------ 134
C + + A L++EM+ K + PDVVTY+
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 135 --------------------TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
+LI GFC+ G + EA + M+ K+ PD ++I++
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 175 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 234
C+ G +++A + M+K G VT +L+ +VN+ + + R +
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSE 709
Query: 235 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ +++ + +D L++ +M + PN ++
Sbjct: 710 AEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 239/426 (56%), Gaps = 17/426 (3%)
Query: 33 MDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ 92
M+ + PD+ +++ ++N YC G++ + ++ + ++G +P++ + +II + ++ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 93 -----------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
PD V+Y+T+ID CK + A + EM ++ I+PDV+TYT
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
+ISGFC +G + EA L ++M K + PD TF+ L++ CK G +K+A V MI+ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
P+VVTY++L+DG C +++ A ++ + M ++ L P++ +Y+ ++NGLCK +++A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
L + + + VTY++L+D CKSG + A E++ EM +GL P ++T++ L++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
C + +++ L+ M +GI PN T+ L+ C LK A +++D+ +G D
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
+TY ++ G CK EA L +M+ G + + TY ++I ++ +A ++ Q
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 436 MIARGL 441
M GL
Sbjct: 692 MRREGL 697
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 207/348 (59%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+V Y+ +I +C+ + +A++L M K +PDV++Y+T+++G+C G+L + L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
M K + P+ Y + ++ LC+ K+ EA+ + MI+ G PD V Y++L+DG+C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
++ A F M ++ PDV +Y+ +I+G C+I + +A LF +M + + P+ VT+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+ LI+G CK+G + DA+ + N M G PNV+TY++L+D LCK +D+A L+ +M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
G+ PN++TY +++GLCK G +++A ++ + G N D TYT +++ CK G D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
A ++ +M G P VT+ +++ G + EKLL M+A+G+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 191/370 (51%), Gaps = 18/370 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + K A +M R + PD+ T+ +I+ +C +G + A +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+F +G +PD++TF + +I+ CK + DA+ +++ M+
Sbjct: 409 FHEMFCKGLEPDSVTF------------------TELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
SP+VVTYTTLI G C G L A LL++M + P+++T++ +V+ LCK G ++EA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
++ G D VTY++LMD YC E++KA++I M L P + ++++++NG
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
C M++D L M + I PN T++SL+ C + A + +M SRG+ P+
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
TY +L+ CK ++ A L ++MK +G +V TY++L+ G K + +A+EVF
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 365 DLLIKGYNLD 374
+ +G D
Sbjct: 691 QMRREGLAAD 700
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 183/369 (49%), Gaps = 6/369 (1%)
Query: 84 IKIQGKLAQPDVVMYSTIIDSLC-KDKL-VNDAYNLYSEMLA---KRISPDVVTYTTLIS 138
I I +A D+ + ++I S + KL V D++ + ++L K D +
Sbjct: 124 IVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQ 183
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG-KVKEAKNVLAVMIKGGEK 197
G L+EA + +M+ + V + ++ + L K+ K A V + G
Sbjct: 184 VLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC 243
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
+V +Y+ ++ C + + +A + M PDV SYS ++NG C+ +D L
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
+ M + + PN Y S+I LC+ ++++A E +EM +G+ P+ + Y++L+D CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
+ A +M + I P+V TYT ++ G C+ G + +A ++F ++ KG D T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
+T +ING CK G +A + + M GC+PN VTY +I L ++GD D A +LL +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 438 ARGLLTGLF 446
GL +F
Sbjct: 484 KIGLQPNIF 492
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 129/282 (45%), Gaps = 18/282 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ + L K +A L +M + P++FT+N ++N C G I A
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
++ G DT+T Y+T++D+ CK ++ A + EML
Sbjct: 513 LVGEFEAAGLNADTVT------------------YTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K + P +VT+ L++GFC+ G L++ LLN M+ K I P+ TF+ LV C +K
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A + M G PD TY +L+ G+C + +A +F M + V +YS++I
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
G K K +A +F QM E + + + D K R
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 239/426 (56%), Gaps = 17/426 (3%)
Query: 33 MDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ 92
M+ + PD+ +++ ++N YC G++ + ++ + ++G +P++ + +II + ++ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 93 -----------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
PD V+Y+T+ID CK + A + EM ++ I+PDV+TYT
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
+ISGFC +G + EA L ++M K + PD TF+ L++ CK G +K+A V MI+ G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
P+VVTY++L+DG C +++ A ++ + M ++ L P++ +Y+ ++NGLCK +++A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
L + + + VTY++L+D CKSG + A E++ EM +GL P ++T++ L++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
C + +++ L+ M +GI PN T+ L+ C LK A +++D+ +G D
Sbjct: 572 CLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
+TY ++ G CK EA L +M+ G + + TY ++I ++ +A ++ Q
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 436 MIARGL 441
M GL
Sbjct: 692 MRREGL 697
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 207/348 (59%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+V Y+ +I +C+ + +A++L M K +PDV++Y+T+++G+C G+L + L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
M K + P+ Y + ++ LC+ K+ EA+ + MI+ G PD V Y++L+DG+C
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
++ A F M ++ PDV +Y+ +I+G C+I + +A LF +M + + P+ VT+
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+ LI+G CK+G + DA+ + N M G PNV+TY++L+D LCK +D+A L+ +M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
G+ PN++TY +++GLCK G +++A ++ + G N D TYT +++ CK G D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
A ++ +M G P VT+ +++ G + EKLL M+A+G+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 191/370 (51%), Gaps = 18/370 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + K A +M R + PD+ T+ +I+ +C +G + A +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+F +G +PD++TF + +I+ CK + DA+ +++ M+
Sbjct: 409 FHEMFCKGLEPDSVTF------------------TELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
SP+VVTYTTLI G C G L A LL++M + P+++T++ +V+ LCK G ++EA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
++ G D VTY++LMD YC E++KA++I M L P + ++++++NG
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
C M++D L M + I PN T++SL+ C + A + +M SRG+ P+
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
TY +L+ CK ++ A L ++MK +G +V TY++L+ G K + +A+EVF
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 365 DLLIKGYNLD 374
+ +G D
Sbjct: 691 QMRREGLAAD 700
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 183/369 (49%), Gaps = 6/369 (1%)
Query: 84 IKIQGKLAQPDVVMYSTIIDSLC-KDKL-VNDAYNLYSEMLA---KRISPDVVTYTTLIS 138
I I +A D+ + ++I S + KL V D++ + ++L K D +
Sbjct: 124 IVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQ 183
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG-KVKEAKNVLAVMIKGGEK 197
G L+EA + +M+ + V + ++ + L K+ K A V + G
Sbjct: 184 VLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC 243
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
+V +Y+ ++ C + + +A + M PDV SYS ++NG C+ +D L
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
+ M + + PN Y S+I LC+ ++++A E +EM +G+ P+ + Y++L+D CK
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
+ A +M + I P+V TYT ++ G C+ G + +A ++F ++ KG D T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
+T +ING CK G +A + + M GC+PN VTY +I L ++GD D A +LL +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 438 ARGLLTGLF 446
GL +F
Sbjct: 484 KIGLQPNIF 492
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 129/282 (45%), Gaps = 18/282 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ + L K +A L +M + P++FT+N ++N C G I A
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
++ G DT+T Y+T++D+ CK ++ A + EML
Sbjct: 513 LVGEFEAAGLNADTVT------------------YTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K + P +VT+ L++GFC+ G L++ LLN M+ K I P+ TF+ LV C +K
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A + M G PD TY +L+ G+C + +A +F M + V +YS++I
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
G K K +A +F QM E + + + D K R
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/453 (31%), Positives = 239/453 (52%), Gaps = 18/453 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + FN +L + AI + + M ++PD TF ++ Y G + A +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQ---------------PDVVMYSTIIDSLC 106
+ + G ++ N I+ +G++ PD ++T+++ LC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K V A + ML + PDV TY ++ISG C +G++KEAV +L+QM+ + +P+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ L+ LCKE +V+EA + V+ G PDV T++SL+ G CL A ++F M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
PD +Y+++I+ LC +D+ALN+ KQM +V+TY++LIDG CK+ +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A E+ +EM G+ N +TY++L+D LCK+ V++A L+ +M +G P+ YTY L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
L C+GG +K A ++ Q + G D+ TY +I+GLCK G + A L+ ++ G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
Y +I LF+K +A L R+M+ +
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 231/430 (53%), Gaps = 22/430 (5%)
Query: 32 QMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA 91
+M + PD+ TFN+LI C Q+ A +L ++ G PD TF T++ QG +
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM--QGYIE 236
Query: 92 QPDV-------------------VMYSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVV 131
+ D+ V + I+ CK+ V DA N EM + PD
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
T+ TL++G C G +K A+ +++ M+ + +PDVYT++ ++ LCK G+VKEA VL M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
I P+ VTY++L+ C N+V +A ++ +T + PDV +++ +I GLC +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
A+ LF++M ++ P+ TY+ LID LC G++ +A ++ +M G +VITY++L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+D CK + A + +M+ G+ N TY L+DGLCK R++DA ++ ++++G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEK 431
D TY ++ C+ G +A ++ M NGC P+ VTY +I L + G + A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 432 LLRQMIARGL 441
LLR + +G+
Sbjct: 597 LLRSIQMKGI 606
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 203/411 (49%), Gaps = 38/411 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + +N ++L K A L++ + + ++PD+ TFN LI C +T
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC----LTRNHR 417
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
V +F+ +++ K +PD Y+ +IDSLC +++A N+ +M
Sbjct: 418 VAMELFE--------------EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ V+TY TLI GFC + +EA + ++M + ++ + T++ L+D LCK +V++
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A ++ MI G+KPD TY+SL+ +C ++ KA DI MT PD+ +Y +I+
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 244 GLCKIKMVDDALNLFK--QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM-HSRG 300
GLCK V+ A L + QM N+TP+ Y+ +I GL + + ++A L EM
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 301 LPPNVITYSSLLDALCKNHH-VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
PP+ ++Y + LC + A+ + ++ +G +P + +L +GL
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLS----- 696
Query: 360 QEVFQDLLIKGYNLDVRTYTI------MINGLCKDGLFDEALALMSKMEDN 404
++ L+K N+ ++ M+ GL K F +ALA + + D+
Sbjct: 697 ---MEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDS 744
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 191/387 (49%), Gaps = 5/387 (1%)
Query: 58 ITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNL 117
I+ A ++ + F P + T + L+ DV + ++ S D +NL
Sbjct: 14 ISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSL-RSQPDDSAALRLFNL 72
Query: 118 YSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCK 177
S+ SP+ Y ++ G + +L M TF IL+++ +
Sbjct: 73 ASK--KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQ 130
Query: 178 EGKVKEAKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 236
E +V+ MI + G KPD Y+ +++ N + E M+ + PDV
Sbjct: 131 FELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVS 190
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+++++I LC+ + A+ + + M + + P+ T+++++ G + G + A + +M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTILLDGLCKGGR 355
G + ++ + ++ CK V++A++ I++M +Q G P+ YT+ L++GLCK G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEI 415
+K A E+ +L +GY+ DV TY +I+GLCK G EA+ ++ +M C+PN VTY
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 416 IIYALFQKGDNDKAEKLLRQMIARGLL 442
+I L ++ ++A +L R + ++G+L
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGIL 397
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 239/425 (56%), Gaps = 18/425 (4%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
P P I++F++ ++ K Y ISL + ++ + DL++F LI+C+C +++ A
Sbjct: 74 HPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLA 133
Query: 62 FSVLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDS 104
S L + K G++P +TF +++ +I G +P+VV+Y+TIIDS
Sbjct: 134 LSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDS 193
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LC+ VN A ++ M I PDVVTY +LI+ G + +L+ M+ I+PD
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V TFS L+D KEG++ EAK MI+ P++VTY+SL++G C+ +++A+ + N
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLN 313
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
+ P+ +Y+ +ING CK K VDD + + M + + + TY++L G C++G
Sbjct: 314 VLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAG 373
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+ S A +++ M S G+ P++ T++ LLD LC + + A+ ++ ++ + + TY
Sbjct: 374 KFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME-D 403
I++ GLCK +++DA +F L +KG + DV TY M+ GL + L+ EA L KM+ +
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Query: 404 NGCTP 408
+G P
Sbjct: 494 DGLMP 498
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 218/405 (53%), Gaps = 17/405 (4%)
Query: 54 HLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM---------------- 97
H + A ++ C++ + P + F+ ++ KL + + V+
Sbjct: 56 HSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY 115
Query: 98 -YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
++T+ID C+ ++ A + +M+ P +VT+ +L++GFC V + EA+ L++Q+
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
V P+V ++ ++D+LC++G+V A +VL M K G +PDVVTY+SL+
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+ I + M RM ++PDV ++S +I+ K + +A + +M ++ PN+VTY+SL
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I+GLC G + +A +++N + S+G PN +TY++L++ CK VD+ + ++ M G+
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
+ +TY L G C+ G+ A++V ++ G + D+ T+ I+++GLC G +AL
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ ++ + +TY III L + + A L + +G+
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGV 460
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 192/375 (51%), Gaps = 8/375 (2%)
Query: 77 TITFNTIIKIQGKLAQ----PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVT 132
+I FN + + +A+ P +V +S ++ ++ K +L+ + IS D+ +
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS 116
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
+TTLI FC +L A+ L +M+ P + TF LV+ C + EA +++ ++
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
G +P+VV Y++++D C +VN A D+ M +M + PDV +Y+ +I L
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
+ + M I+P+V+T+S+LID K G++ +A + NEM R + PN++TY+SL+
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 372
+ LC + +D A ++ + +G PN TY L++G CK R+ D ++ + G +
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 373 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA--- 429
D TY + G C+ G F A ++ +M G P+ T+ I++ L G KA
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 430 -EKLLRQMIARGLLT 443
E L + G++T
Sbjct: 417 LEDLQKSKTVVGIIT 431
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 250/452 (55%), Gaps = 14/452 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + SL K A+ L ++M +PD TFN +I C +I A +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 65 LCNIFKRGYQPDTITF----NTIIKIQG---------KLAQPDVVMYSTIIDSLCKDKLV 111
+ + RG+ PD IT+ N + KI ++ +P++V+++T+I +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRL 369
Query: 112 NDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+DA + S+M+ I PDV TY +LI G+ G + A+ +L+ M K P+VY+++I
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
LVD CK GK+ EA NVL M G KP+ V ++ L+ +C + + +A +IF M R
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
PDV +++ +I+GLC++ + AL L + M +E + N VTY++LI+ + G I +A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
+LVNEM +G P + ITY+SL+ LC+ VD A SL +KM G P+ + IL++GL
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
C+ G +++A E ++++++G D+ T+ +INGLC+ G ++ L + K++ G P+
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
VT+ ++ L + G A LL + I G +
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 245/454 (53%), Gaps = 22/454 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +N LV + A ++ M R++ P LFTF +++ +C + +I SA S+
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
L ++ K G P+++ + T+I K + PD ++ +I LCK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+N+A + + ML + +PD +TY L++G C +G++ A L ++ P++
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVI 355
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
F+ L+ G++ +AK VL+ M+ G PDV TY+SL+ GY V A ++ + M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
P+V SY+I+++G CK+ +D+A N+ +M + + PN V ++ LI CK RI
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A E+ EM +G P+V T++SL+ LC+ + +A+ L++ M +G++ N TY L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
++ + G +K+A+++ +++ +G LD TY +I GLC+ G D+A +L KM +G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
P+ ++ I+I L + G ++A + ++M+ RG
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 202/414 (48%), Gaps = 42/414 (10%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+P Y+ +++ L A N++ +ML+++I P + T+ ++ FC V ++ A+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
LL M P+ + L+ +L K +V EA +L M G PD T++ ++ G C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM---------- 261
+ +N+A + N M APD +Y ++NGLCKI VD A +LF ++
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 262 ----------------------HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+ I P+V TY+SLI G K G + A E++++M ++
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
G PNV +Y+ L+D CK +D A +++ +M G+ PN + L+ CK R+ +A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 360 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
E+F+++ KG DV T+ +I+GLC+ AL L+ M G N VTY +I A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 420 LFQKGDNDKAEKLLRQMIARG----------LLTGLFYATEFEAVEELSAPGLR 463
++G+ +A KL+ +M+ +G L+ GL A E + L LR
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 146/283 (51%), Gaps = 5/283 (1%)
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
S P +++++++ L K A NV M+ P + T+ +M +C VNE++ A
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
+ MT+ P+ Y +I+ L K V++AL L ++M P+ T++ +I G
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
LCK RI++A ++VN M RG P+ ITY L++ LCK VD A L ++ P
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PE 352
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGLFDEALALM 398
+ + L+ G GRL DA+ V D++ G DV TY +I G K+GL AL ++
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 399 SKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
M + GC PN +Y I++ + G D+A +L +M A GL
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 18/134 (13%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P I N L ++ A+ ++M R PD+ TFN LIN C G+I +
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ + G PDT+TFNT++ LCK V DA L E +
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSW------------------LCKGGFVYDACLLLDEGIE 697
Query: 124 KRISPDVVTYTTLI 137
P+ T++ L+
Sbjct: 698 DGFVPNHRTWSILL 711
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/436 (32%), Positives = 233/436 (53%), Gaps = 25/436 (5%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
FNK L K L ++ R V+P+LFT+N+ I C G++ A ++ +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI 278
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
++G +PD IT+N +I LCK+ +A +M+ + + PD
Sbjct: 279 EQGPKPDVITYNNLIY------------------GLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
TY TLI+G+C G ++ A ++ V PD +T+ L+D LC EG+ A +
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
+ G KP+V+ Y++L+ G + +A + N M+ L P+VQ+++I++NGLCK+
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
V DA L K M ++ P++ T++ LI G ++ +A E+++ M G+ P+V TY+
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
SLL+ LCK ++ + K M +G PN++T+ ILL+ LC+ +L +A + +++ K
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMED----NGCTPNAVTYEIIIYALFQKGD 425
N D T+ +I+G CK+G D A L KME+ + TP TY III+A +K +
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP---TYNIIIHAFTEKLN 617
Query: 426 NDKAEKLLRQMIARGL 441
AEKL ++M+ R L
Sbjct: 618 VTMAEKLFQEMVDRCL 633
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 236/450 (52%), Gaps = 17/450 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P + +N + LV + ++ A + +M R + PD+++F I + +C + +A
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 64 VLCNIFKRGYQPDTITFNTII-------------KIQGKLAQPDVVM----YSTIIDSLC 106
+L N+ +G + + + + T++ ++ GK+ V + ++ ++ LC
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K V + L +++ + + P++ TY I G C G+L AV ++ ++ + PDV
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ L+ LCK K +EA+ L M+ G +PD TY++L+ GYC V AE I
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
PD +Y +I+GLC + AL LF + + I PNV+ Y++LI GL G I
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A +L NEM +GL P V T++ L++ LCK V +A L+K M +G P+++T+ IL
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+ G ++++A E+ +L G + DV TY ++NGLCK F++ + M + GC
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
PN T+ I++ +L + D+A LL +M
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEM 557
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 238/456 (52%), Gaps = 18/456 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N F L + A+ + + + PD+ T+N LI C + A
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 65 LCNIFKRGYQPDTITFNTIIK--IQGKLAQ---------------PDVVMYSTIIDSLCK 107
L + G +PD+ T+NT+I +G + Q PD Y ++ID LC
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ N A L++E L K I P+V+ Y TLI G G + EA L N+M K + P+V T
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
F+ILV+ LCK G V +A ++ VMI G PD+ T++ L+ GY ++ A +I + M
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ PDV +Y+ ++NGLCK +D + +K M + PN+ T++ L++ LC+ ++
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTIL 346
+A L+ EM ++ + P+ +T+ +L+D CKN +D A +L +KM+ + + TY I+
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+ + + A+++FQ+++ + D TY +M++G CK G + + +M +NG
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
P+ T +I L + +A ++ +M+ +GL+
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 173/332 (52%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
V +A N++ M P V +Y ++S G +A + +M + I PDVY+F+I
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
+ + CK + A +L M G + +VV Y +++ G+ N + ++F M
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
++ + +++ ++ LCK V + L ++ + PN+ TY+ I GLC+ G + A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
+V + +G P+VITY++L+ LCKN A + KM ++G+ P+ YTY L+ G
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
CKGG ++ A+ + D + G+ D TY +I+GLC +G + ALAL ++ G PN
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+ Y +I L +G +A +L +M +GL+
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 172/335 (51%), Gaps = 19/335 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I +N L A L+ +M + ++P++ TFNIL+N C +G ++ A +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ + +GY PD TFN +I YST + + +A + ML
Sbjct: 449 VKVMISKGYFPDIFTFNILIH-----------GYSTQLK-------MENALEILDVMLDN 490
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ PDV TY +L++G C + ++ + MV K P+++TF+IL+++LC+ K+ EA
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM-ELAPDVQSYSIMIN 243
+L M PD VT+ +L+DG+C +++ A +F M +++ +Y+I+I+
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
+ V A LF++M + P+ TY ++DG CK+G ++ ++ + EM G P
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
++ T +++ LC V A +I +M +G++P
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 150/298 (50%)
Query: 144 GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
G+++EAV + +M P V++++ ++ L G +A V M G PDV ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+ M +C + + A + N M+ +V +Y ++ G + + LF +M
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
++ + T++ L+ LCK G + + +L++++ RG+ PN+ TY+ + LC+ +D
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
A+ ++ + QG P+V TY L+ GLCK + ++A+ ++ +G D TY +I
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
G CK G+ A ++ NG P+ TY +I L +G+ ++A L + + +G+
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 137/270 (50%)
Query: 177 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 236
++GKV+EA NV M +P V +Y+++M ++A ++ M + PDV
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
S++I + CK AL L M ++ NVV Y +++ G + ++ +EL +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
+ G+ + T++ LL LCK V L+ K+ +G+LPN++TY + + GLC+ G L
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
A + L+ +G DV TY +I GLCK+ F EA + KM + G P++ TY +
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 417 IYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
I + G AE+++ + G + F
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
T+ +++ L GK + + VL M + G Y M Y +V +A ++F
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M + P V SY+ +++ L D A ++ +M ITP+V +++ + CK+ R
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
A L+N M S+G NV+ Y +++ + + L KM G+ + T+
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
LL LCK G +K+ +++ ++ +G ++ TY + I GLC+ G D A+ ++ + + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
P+ +TY +IY L + +AE L +M+ GL
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 224/412 (54%), Gaps = 21/412 (5%)
Query: 32 QMDFRRVMPDLFTFNIL-INCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKL 90
+M R V+PD ++ ++ I C+ G+I A L + +RG+ PD T
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNAT----------- 254
Query: 91 AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV 150
+ I+ +LC++ LVN A + +M+ P+++ +T+LI G C G +K+A
Sbjct: 255 -------CTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 307
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDG 209
+L +MV P+VYT + L+D LCK G ++A + +++ KP+V TY+S++ G
Sbjct: 308 EMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGG 367
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
YC +++N+AE +F+ M L P+V +Y+ +ING CK A L M E PN
Sbjct: 368 YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
+ TY++ ID LCK R +A+EL+N+ S GL + +TY+ L+ CK + ++ A++
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
+M G ++ IL+ C+ ++K+++ +FQ ++ G TYT MI+ CK+G
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
D AL M+ +GC P++ TY +I L +K D+A KL MI RGL
Sbjct: 548 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 203/430 (47%), Gaps = 27/430 (6%)
Query: 35 FRRVM-----PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK---- 85
FR+++ P+L F LI+ C G I AF +L + + G++P+ T +I
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334
Query: 86 --------------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVV 131
++ +P+V Y+++I CK+ +N A L+S M + + P+V
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
TYTTLI+G C G A L+N M + P++YT++ +D+LCK+ + EA +L
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
G + D VTY+ L+ C N++N+A F M + D++ +I+I C+ K +
Sbjct: 455 FSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKM 514
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
++ LF+ + + + P TY+S+I CK G I A + + M G P+ TY SL
Sbjct: 515 KESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSL 574
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+ LCK VD A L + M +G+ P T L CK +A + + L K
Sbjct: 575 ISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK-- 632
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEK 431
L +RT ++ LC + A K+ + + + VT A + G N+
Sbjct: 633 -LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTD 691
Query: 432 LLRQMIARGL 441
L + I+RG+
Sbjct: 692 LTER-ISRGV 700
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 147/327 (44%), Gaps = 21/327 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + K A L +M + + P++ T+ LIN +C G A+ +
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ + G+ P+ T+N IDSLCK +AY L ++ +
Sbjct: 416 MNLMGDEGFMPNIYTYN------------------AAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ D VTYT LI C + +A+ +M D+ +IL+ A C++ K+KE+
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ + +++ G P TY+S++ YC +++ A F+ M R PD +Y +I+G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
LCK MVD+A L++ M ++P VT +L CK ++A L+ + +
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW--- 634
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKM 331
+ T +L+ LC V A +K+
Sbjct: 635 IRTVRTLVRKLCSEKKVGVAALFFQKL 661
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 27/317 (8%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + K + A L M MP+++T+N I+ C + A+ +
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGK-------LA----------QPDVVMYSTIIDSLCK 107
L F G + D +T+ +I+ Q K LA + D+ + + +I + C+
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K + ++ L+ +++ + P TYT++IS +C G + A+ + M PD +T
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ L+ LCK+ V EA + MI G P VT +L YC K D N M
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC------KRNDSANAMI 624
Query: 228 RMELAPD---VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
+E +++ ++ LC K V A F+++ ++ + + VT ++ +SG
Sbjct: 625 LLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 684
Query: 285 RISDAWELVNEMHSRGL 301
+ + +L + SRG+
Sbjct: 685 KNNLVTDLTERI-SRGV 700
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
++ A+ ++ M++QG+ P+ T +L+ + G ++ A+ VF ++ ++G D +Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
+M+ G +DG EA ++ M G P+ T +I+ AL + G ++A R+MI
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 281
Query: 440 GLLTGLFYATE--------------FEAVEELSAPGLRSPV 466
G L T FE +EE+ G + V
Sbjct: 282 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 240/443 (54%), Gaps = 14/443 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N +L+ + + M P++FT+N+L+ C ++ A +
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLA------------QPDVVMYSTIIDSLCKDKLVN 112
L + +G PD +++ T+I ++ +P V +Y+ +I+ LCK+
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYK 263
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
A+ L EM+ K ISP+V++Y+TLI+ C GQ++ A L QM+ + +P++YT S LV
Sbjct: 264 GAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV 323
Query: 173 DALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
G +A ++ MI+G G +P+VV Y++L+ G+C + KA +F+ M +
Sbjct: 324 KGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
+P++++Y +ING K +D A+ ++ +M T PNVV Y+++++ LC+ + +A
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP-NVYTYTILLDGL 350
L+ M P+V T+++ + LC +D A + ++M+ Q P N+ TY LLDGL
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
K R+++A + +++ ++G TY +++G C GL AL L+ KM +G +P+
Sbjct: 504 AKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDE 563
Query: 411 VTYEIIIYALFQKGDNDKAEKLL 433
+T +II A ++G ++A ++L
Sbjct: 564 ITMNMIILAYCKQGKAERAAQML 586
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 219/421 (52%), Gaps = 24/421 (5%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P + +N L K Y A L ++M + + P++ +++ LIN C+ GQI A
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
FS L + KRG P+ T ++++K + T D+L +L+++M
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVK--------GCFLRGTTFDAL----------DLWNQM 342
Query: 122 LAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
+ + P+VV Y TL+ GFC G + +AV + + M +P++ T+ L++ K G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+ A + M+ G P+VV Y+++++ C ++ +AE + M++ AP V +++
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 241 MINGLCKIKMVDDALNLFKQMHTEN-ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
I GLC +D A +F+QM ++ PN+VTY+ L+DGL K+ RI +A+ L E+ R
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
G+ + TY++LL C A+ L+ KM G P+ T +++ CK G+ + A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 360 QEVFQDLLIKG---YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
++ DL+ G + DV +YT +I GLC+ ++ + L+ +M G P+ T+ ++
Sbjct: 583 AQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Query: 417 I 417
I
Sbjct: 642 I 642
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 182/352 (51%), Gaps = 7/352 (1%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+P+V Y+ ++ +LCK+ V+ A L EM K PD V+YTT+IS C VG +KE
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
L + P V ++ L++ LCKE K A ++ M++ G P+V++YS+L++ C
Sbjct: 238 LAER-----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPNV 270
++ A M + P++ + S ++ G DAL+L+ QM + PNV
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNV 352
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
V Y++L+ G C G I A + + M G PN+ TY SL++ K +D A+ + K
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
M G PNV YT +++ LC+ + K+A+ + + + + V T+ I GLC G
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472
Query: 391 FDEALALMSKMED-NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
D A + +ME + C PN VTY ++ L + ++A L R++ RG+
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 191/397 (48%), Gaps = 28/397 (7%)
Query: 43 FTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI--QGKLAQPDVVMYST 100
TF ++I GQ+ S +L + +G+ F ++I + Q LA+ V M+
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
I + C P V Y ++ +++ + M
Sbjct: 137 IKEFGC--------------------DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
P+V+T+++L+ ALCK KV AK +L M G PD V+Y++++ C V V +
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
++ R E P V Y+ +INGLCK A L ++M + I+PNV++YS+LI+ L
Sbjct: 237 EL---AERFE--PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPN 339
C SG+I A+ + +M RG PN+ T SSL+ +A+ L +M + G+ PN
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
V Y L+ G C G + A VF + G + ++RTY +ING K G D A+ + +
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWN 411
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
KM +GC PN V Y ++ AL + +AE L+ M
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 180/345 (52%), Gaps = 8/345 (2%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
+ +I L D V+ L +M + + ++IS + VG + AV + ++
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
+P V ++ ++D L E +++ V M + G +P+V TY+ L+ C N+V+
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A+ + M+ PD SY+ +I+ +C++ +V + L E P V Y++LI
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALI 253
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
+GLCK A+EL+ EM +G+ PNVI+YS+L++ LC + ++ A S + +M +G
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMINGLCKDGLFDEAL 395
PN+YT + L+ G G DA +++ +I+G+ L +V Y ++ G C G +A+
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQ-MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
++ S ME+ GC+PN TY +I ++G D A + +M+ G
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 139/275 (50%), Gaps = 6/275 (2%)
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TF +++ L +G+V + +L M G + S++ Y V +A ++F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
P V+ Y+ +++ L + +++ M + PNV TY+ L+ LCK+ ++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
A +L+ EM ++G P+ ++Y++++ ++C+ V L ++ + P V Y L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNAL 252
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
++GLCK K A E+ ++++ KG + +V +Y+ +IN LC G + A + +++M GC
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
PN T ++ F +G A L QMI RG
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGF 346
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ + +L + + A SL + M P + TFN I C G++ A V
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ ++ P P++V Y+ ++D L K + +AY L E+ +
Sbjct: 480 FRQMEQQHRCP-----------------PNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ TY TL+ G C G A+ L+ +M++ +PD T ++++ A CK+GK + A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 185 KNVLAVMIKGGEK--PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
+L ++ G K PDV++Y++++ G C N + M + P + ++S++I
Sbjct: 583 AQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Query: 243 N 243
N
Sbjct: 643 N 643
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 254 ALNLFKQMHTENI---TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
AL+ FK + N+ TP +T+ +I L G++ L+ +M +G + + S
Sbjct: 59 ALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS 116
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
++ + + A+ + ++K G P+V Y +LD L R++ V++D+ G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 371 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
+ +V TY +++ LCK+ D A L+ +M + GC P+AV+Y +I ++ + G +
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 431 KLLRQM-----IARGLLTGLF----YATEFEAVEELSAPGLRSP 465
+L + + L+ GL Y FE + E+ G+ SP
Sbjct: 237 ELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGI-SP 279
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 234/418 (55%), Gaps = 17/418 (4%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI---QG-------- 88
P+ +++ILI+ C +G++ AF + + ++G QP T T+ +IK +G
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 89 ------KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
+ +P+V Y+ +ID LC+D + +A + +M+ RI P V+TY LI+G+C
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
G++ A LL M ++ P+V TF+ L++ LC+ GK +A ++L M+ G PD+V+
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 203 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
Y+ L+DG C +N A + ++M ++ PD +++ +IN CK D A M
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
+ I+ + VT ++LIDG+CK G+ DA ++ + + + + +LD L K V
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 382
++++ K+ G++P+V TYT L+DGL + G + + + + + + G +V YTI+I
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 383 NGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
NGLC+ G +EA L+S M+D+G +PN VTY +++ G D+A + +R M+ RG
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 237/465 (50%), Gaps = 58/465 (12%)
Query: 35 FRRVMPDLFT-----FNILINCYCHLGQITSAFSVLCNIFKRGYQPDT-------ITFNT 82
+RR+ D F + ++N C G +A + I K G+ D+ + F
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 83 IIKIQGKL-----------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVV 131
+ ++ L P+ V YS +I LC+ + +A+ L +M K P
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
TYT LI C G + +A L ++M+ + P+V+T+++L+D LC++GK++EA V M
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
+K P V+TY++L++GYC V A ++ M + P+V++++ ++ GLC++
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
A++L K+M ++P++V+Y+ LIDGLC+ G ++ A++L++ M+ + P+ +T++++
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ------- 364
++A CK D A + + M +GI + T T L+DG+CK G+ +DA + +
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 365 -----------DLLIKGYNL-----------------DVRTYTIMINGLCKDGLFDEALA 396
D+L KG + V TYT +++GL + G +
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ M+ +GC PN Y III L Q G ++AEKLL M G+
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 233/520 (44%), Gaps = 105/520 (20%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + L + A + ++M R+ P + T+N LIN YC G++ AF +
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L + KR +P+ TFN ++ + LC+ A +L ML
Sbjct: 394 LTVMEKRACKPNVRTFNELM------------------EGLCRVGKPYKAVHLLKRMLDN 435
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+SPD+V+Y LI G C G + A LL+ M I PD TF+ +++A CK+GK A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
L +M++ G D VT ++L+DG C V + A I T+ +M + S +++++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
L K V + L + +++ + P+VVTY++L+DGL +SG I+ ++ ++ M G PN
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
V Y+ +++ LC+ V+ A L+ M+ G+ PN TYT+++ G G+L A E +
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 365 DLLIKGYNLDVRTYTIMING---------------------------------------- 384
++ +GY L+ R Y+ ++ G
Sbjct: 676 AMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLG 735
Query: 385 -------------LCKDGLFDEA----------------------------------LAL 397
LCK+G DE+ + L
Sbjct: 736 GCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMEL 795
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
++ + +G P+ ++ ++I L ++GD ++A +L+ +++
Sbjct: 796 ITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
N YSSL+ L K A+ M + G +I Y ++++ALCKN + + A +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMINGLC 386
K+ G + + + T LL G C+G L+DA +VF D++ K + +Y+I+I+GLC
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF-DVMSKEVTCAPNSVSYSILIHGLC 277
Query: 387 KDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+ G +EA L +M + GC P+ TY ++I AL +G DKA L +MI RG
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 166/418 (39%), Gaps = 111/418 (26%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP I+ +N L + H TA L M+ + PD TF +IN +C G+ A +
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAY--NLYSEM 121
L + ++G D +T T+I K+ + ++ I+++L K +++ + N+ +M
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF--ILETLVKMRILTTPHSLNVILDM 555
Query: 122 LAKR-----------------ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
L+K + P VVTYTTL+ G G + + +L M L P+
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT---------------------- 202
VY ++I+++ LC+ G+V+EA+ +L+ M G P+ VT
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 203 -------------YSSLMDGYCLVNEV--NKAEDIFNTMTRMELAPD--------VQSYS 239
YSSL+ G+ L + N E + + E P+ V+
Sbjct: 676 AMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLG 735
Query: 240 IMINGLC--------KIKMVDDALNLF-----------------------KQMHTE---- 264
I+GLC K D++ +L K+ HT+
Sbjct: 736 GCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMEL 795
Query: 265 -------NITPNVVTYSSLIDGLCKSGRISDAWELVNE-MHSRGL--PPNVITYSSLL 312
P+ ++ +I GL K G A ELV E + S G+ V+TY L
Sbjct: 796 ITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECL 853
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 133/325 (40%), Gaps = 83/325 (25%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
++P + T+ L++ G IT +F +L ++K+ G L P+V
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRIL----------------ELMKLSGCL--PNVYP 618
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y+ II+ LC+ V +A L S M +SP+ VTYT ++ G+ G+L A+ + MV
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 158 -------------------------------------LKSINPDVYTFSI---------- 170
L+ +P+ I
Sbjct: 679 ERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCI 738
Query: 171 ------LVDALCKEGKVKEAKNVLAVMIKGG---EKP-DVVTYSSLMDGYCLVNEVNKAE 220
LV LCKEG+ E+ +++ +++ G EK D++ M+ YC + K
Sbjct: 739 SGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDII-----MESYCSKKKHTKCM 793
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT---PNVVTYSSLI 277
++ + + P +S+ ++I GL K + A L ++ T N V+TY +
Sbjct: 794 ELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECL 853
Query: 278 DGLCKSGRISDAWELVNEMHSRGLP 302
++G S+ +LV+++H R P
Sbjct: 854 MEGDETGDCSEVIDLVDQLHCRERP 878
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 227/425 (53%), Gaps = 19/425 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + +N L K Y A + +M + PD T+ L+ C G +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 64 VLCNIFKRGYQPDTITFNTIIKI---QGKLAQ--------------PDVVMYSTIIDSLC 106
V ++ R PD + F++++ + G L + PD V+Y+ +I C
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ +++ A NL +EML + + DVVTY T++ G C L EA L N+M +++ PD Y
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T +IL+D CK G ++ A + M + + DVVTY++L+DG+ V +++ A++I+ M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
E+ P SYSI++N LC + +A ++ +M ++NI P V+ +S+I G C+SG
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ--GILPNVYTYT 344
SD + +M S G P+ I+Y++L+ + ++ A L+KKM+ + G++P+V+TY
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
+L G C+ ++K+A+ V + ++ +G N D TYT MING EA + +M
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 405 GCTPN 409
G +P+
Sbjct: 722 GFSPD 726
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 237/485 (48%), Gaps = 54/485 (11%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N SLV+ A + Q++ V +++T NI++N C G++ + L + +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 71 RGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLCKDKLVND 113
+G PD +T+NT+I + GK P V Y+T+I+ LCK
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 114 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS---- 169
A +++EML +SPD TY +L+ C G + E + + M + + PD+ FS
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 170 -------------------------------ILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
IL+ C++G + A N+ M++ G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
DVVTY++++ G C + +A+ +FN MT L PD + +I+I+G CK+ + +A+ LF
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
++M + I +VVTY++L+DG K G I A E+ +M S+ + P I+YS L++ALC
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
H+ A + +M + I P V ++ G C+ G D + + ++ +G+ D +Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 379 TIMINGLCKDGLFDEALALMSKMED--NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+I G ++ +A L+ KME+ G P+ TY I++ ++ +AE +LR+M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 437 IARGL 441
I RG+
Sbjct: 684 IERGV 688
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 208/394 (52%), Gaps = 1/394 (0%)
Query: 43 FTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTII 102
+ + +I+ G+++ A S L + +R N++ D V + +I
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV-FDLLI 172
Query: 103 DSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN 162
+ + + + +A+ ++ + +K + + LI +G ++ A G+ ++ +
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 222
+VYT +I+V+ALCK+GK+++ L+ + + G PD+VTY++L+ Y + +A ++
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
N M +P V +Y+ +INGLCK + A +F +M ++P+ TY SL+ CK
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
G + + ++ ++M SR + P+++ +SS++ ++ ++D A+ +K G++P+
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
YTIL+ G C+ G + A + ++L +G +DV TY +++GLCK + EA L ++M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+ P++ T I+I + G+ A +L ++M
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 215/428 (50%), Gaps = 5/428 (1%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF--KRGYQ 74
LV++ + A S +M R + L N L + + + G S F +L + R +
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 182
Query: 75 PDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYT 134
F T+++ +G D + +I SL + V A+ +Y E+ + +V T
Sbjct: 183 EAHEAF-TLLRSKGFTVSIDAC--NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239
Query: 135 TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 194
+++ C G++++ L+Q+ K + PD+ T++ L+ A +G ++EA ++ M
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G P V TY+++++G C + +A+++F M R L+PD +Y ++ CK V +
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+F M + ++ P++V +SS++ +SG + A N + GL P+ + Y+ L+
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
C+ + A++L +M QG +V TY +L GLCK L +A ++F ++ + D
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
T TI+I+G CK G A+ L KM++ + VTY ++ + GD D A+++
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 435 QMIARGLL 442
M+++ +L
Sbjct: 540 DMVSKEIL 547
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 52/232 (22%)
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDA---------------WELVN------------ 294
H N ++ S++I L +SGR+SDA E+VN
Sbjct: 105 HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSN 164
Query: 295 ------------------EMH-------SRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
E H S+G ++ ++L+ +L + V+ A + +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
++ G+ NVYT I+++ LCK G+++ + KG D+ TY +I+ G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
L +EA LM+ M G +P TY +I L + G ++A+++ +M+ GL
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 240/432 (55%), Gaps = 19/432 (4%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
FN T +V + + S + + +V+ D+++F ILI C G+I +F +L +
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT 190
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+ G+ P+ VV+Y+T+ID CK + A +L+ EM + +
Sbjct: 191 EFGFSPN------------------VVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
TYT LI+G G K+ + +M + P++YT++ +++ LCK+G+ K+A V
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M + G ++VTY++L+ G C ++N+A + + M + P++ +Y+ +I+G C +
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ AL+L + + + ++P++VTY+ L+ G C+ G S A ++V EM RG+ P+ +TY+
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
L+D ++ +++ AI L M+ G++P+V+TY++L+ G C G++ +A +F+ ++ K
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
+ Y MI G CK+G AL L+ +ME+ PN +Y +I L ++ + +A
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 430 EKLLRQMIARGL 441
E+L+ +MI G+
Sbjct: 533 ERLVEKMIDSGI 544
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 205/357 (57%), Gaps = 3/357 (0%)
Query: 87 QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
+ + ++ +Y II+S + + +N + + ++EM+ P + L++
Sbjct: 86 ESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF 145
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
+ N+ K + DVY+F IL+ C+ G+++++ ++L + + G P+VV Y++L
Sbjct: 146 NQWWSFFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTL 204
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
+DG C E+ KA+D+F M ++ L + ++Y+++INGL K + ++++M + +
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 326
PN+ TY+ +++ LCK GR DA+++ +EM RG+ N++TY++L+ LC+ ++ A
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324
Query: 327 LIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 386
++ +MK GI PN+ TY L+DG C G+L A + +DL +G + + TY I+++G C
Sbjct: 325 VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Query: 387 KDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN-DKAEKLLRQMIARGLL 442
+ G A ++ +ME+ G P+ VTY I+I F + DN +KA +L M GL+
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILI-DTFARSDNMEKAIQLRLSMEELGLV 440
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 178/330 (53%), Gaps = 22/330 (6%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N F + VK + + + ++M V P+L+T+N ++N C G+ AF V + +
Sbjct: 241 NGLFKNGVKKQGF----EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
RG + +T+NT+I LC++ +N+A + +M + I+P++
Sbjct: 297 RGVSCNIVTYNTLI------------------GGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
+TY TLI GFC VG+L +A+ L + + ++P + T++ILV C++G A ++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M + G KP VTY+ L+D + + + KA + +M + L PDV +YS++I+G C
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
+++A LFK M +N PN V Y+++I G CK G A +L+ EM + L PNV +Y
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNV 340
+++ LCK A L++KM GI P+
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 152/319 (47%), Gaps = 19/319 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N L K A + +M R V ++ T+N LI C ++ A V
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ + G P+ IT+N T+ID C + A +L ++ ++
Sbjct: 326 VDQMKSDGINPNLITYN------------------TLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+SP +VTY L+SGFC G A ++ +M + I P T++IL+D + +++A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ M + G PDV TYS L+ G+C+ ++N+A +F +M P+ Y+ MI G
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
CK AL L K+M + + PNV +Y +I+ LCK + +A LV +M G+ P+
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Query: 305 VITYSSLLDALCKNHHVDN 323
+ SL+ + HV +
Sbjct: 548 T-SILSLISRAKNDSHVSS 565
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P +I +N A+SL + + R + P L T+NIL++ +C G + A
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 64 VLCNIFKRGYQPDTITFNTII-----------KIQGKLAQ------PDVVMYSTIIDSLC 106
++ + +RG +P +T+ +I IQ +L+ PDV YS +I C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+N+A L+ M+ K P+ V Y T+I G+C G A+ LL +M K + P+V
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
++ +++ LCKE K KEA+ ++ MI G P
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 86/174 (49%), Gaps = 1/174 (0%)
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y +I+ +S ++ + NEM G P ++ LL + + + S + K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ +L +VY++ IL+ G C+ G ++ + ++ +L G++ +V YT +I+G CK G +
Sbjct: 157 SKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
+A L +M G N TY ++I LF+ G + ++ +M G+ L+
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 232/452 (51%), Gaps = 17/452 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + N S+VK+ + S ++M R++ PD+ TFNILIN C G +
Sbjct: 195 NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSY 254
Query: 64 VLCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLC 106
++ + K GY P +T+NT++ ++ K DV Y+ +I LC
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ + Y L +M + I P+ VTY TLI+GF G++ A LLN+M+ ++P+
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TF+ L+D EG KEA + +M G P V+Y L+DG C E + A + M
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
R + +Y+ MI+GLCK +D+A+ L +M + I P++VTYS+LI+G CK GR
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
A E+V ++ GL PN I YS+L+ C+ + AI + + M +G + +T+ +L
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+ LCK G++ +A+E + + G + ++ +ING G +A ++ +M G
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
P TY ++ L + G +AEK L+ + A
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 206/403 (51%), Gaps = 18/403 (4%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
P ++T N ++ G+ S +S L + KR PD TFN +I +
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINV------------- 242
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
LC + + L +M +P +VTY T++ +C G+ K A+ LL+ M K
Sbjct: 243 -----LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 297
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
++ DV T+++L+ LC+ ++ + +L M K P+ VTY++L++G+ +V A
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
+ N M L+P+ +++ +I+G +AL +F M + +TP+ V+Y L+DG
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
LCK+ A M G+ ITY+ ++D LCKN +D A+ L+ +M GI P+
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
+ TY+ L++G CK GR K A+E+ + G + + Y+ +I C+ G EA+ +
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
M G T + T+ +++ +L + G +AE+ +R M + G+L
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 193/362 (53%), Gaps = 1/362 (0%)
Query: 89 KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKE 148
+L + +Y +I ++ ++ D+ ++ M +P V T ++ G+
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 149 AVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
L +M+ + I PDV TF+IL++ LC EG +++ ++ M K G P +VTY++++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
YC A ++ + M + DV +Y+++I+ LC+ + L + M I P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
N VTY++LI+G G++ A +L+NEM S GL PN +T+++L+D + A+ +
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
M+ +G+ P+ +Y +LLDGLCK A+ + + G + TYT MI+GLCK+
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL-TGLFY 447
G DEA+ L+++M +G P+ VTY +I + G A++++ ++ GL G+ Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 448 AT 449
+T
Sbjct: 517 ST 518
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 215/459 (46%), Gaps = 23/459 (5%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF----- 62
+ +N T++ K+ + A A+SL +M R ++PD +T+ LI+ C G+ A
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 63 -----SVLCN----------IFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCK 107
+VL N +FK G I F + G PD+V + +ID +
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH--TPDIVTTNAMIDGYSR 771
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +L EM + P++ TY L+ G+ + + L ++L I PD T
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
LV +C+ ++ +L I G + D T++ L+ C E+N A D+ MT
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ ++ D + M++ L + ++ + +M + I+P Y LI+GLC+ G I
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A+ + EM + + P + S+++ AL K D A L++ M ++P + ++T L+
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
CK G + +A E+ + G LD+ +Y ++I GLC G A L +M+ +G
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1071
Query: 408 PNAVTYEIIIYALFQKGDN-DKAEKLLRQMIARGLLTGL 445
NA TY+ +I L + A+ +L+ ++ARG +T +
Sbjct: 1072 ANATTYKALIRGLLARETAFSGADIILKDLLARGFITSM 1110
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 182/381 (47%), Gaps = 18/381 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + F + K + I +QMD PD+ T N +I+ Y +G+I +
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L P+ N P++ Y+ ++ K K V+ ++ LY ++
Sbjct: 782 L---------PEMGNQN---------GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
I PD +T +L+ G C L+ + +L + + + D YTF++L+ C G++ A
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+++ VM G D T +++ + ++ + + M++ ++P+ + Y +ING
Sbjct: 884 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
LC++ + A + ++M I P V S+++ L K G+ +A L+ M L P
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
+ ++++L+ CKN +V A+ L M + G+ ++ +Y +L+ GLC G + A E+++
Sbjct: 1004 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1063
Query: 365 DLLIKGYNLDVRTYTIMINGL 385
++ G+ + TY +I GL
Sbjct: 1064 EMKGDGFLANATTYKALIRGL 1084
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 166/369 (44%), Gaps = 19/369 (5%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P I+ N + L +M + P+L T+NIL++ Y ++++F
Sbjct: 756 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 815
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ +I G PD +T ++++ +C+ ++ + +
Sbjct: 816 LYRSIILNGILPDKLTCHSLVL------------------GICESNMLEIGLKILKAFIC 857
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ + D T+ LIS C G++ A L+ M I+ D T +V L + + +E
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
++ VL M K G P+ Y L++G C V ++ A + M ++ P + S M+
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
L K D+A L + M + P + ++++L+ CK+G + +A EL M + GL
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG-LCKGGRLKDAQEV 362
++++Y+ L+ LC + A L ++MK G L N TY L+ G L + A +
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Query: 363 FQDLLIKGY 371
+DLL +G+
Sbjct: 1098 LKDLLARGF 1106
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 223/420 (53%), Gaps = 18/420 (4%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA-------- 91
P +FT+NI+I+C C G + +A + + RG PDT+T+N++I GK+
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 92 ---------QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
+PDV+ Y+ +I+ CK + Y EM + P+VV+Y+TL+ FC
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
G +++A+ M + P+ YT++ L+DA CK G + +A + M++ G + +VVT
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 203 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
Y++L+DG C + +AE++F M + P++ SY+ +I+G K K +D AL L ++
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
I P+++ Y + I GLC +I A ++NEM G+ N + Y++L+DA K+ +
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIM 381
+ L+ +MK I V T+ +L+DGLCK + A + F + G + +T M
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
I+GLCKD + A L +M G P+ Y ++ F++G+ +A L +M G+
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 232/455 (50%), Gaps = 18/455 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N + K A L ++M FR ++PD T+N +I+ + +G++
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ +PD IT+N +I +++G +P+VV YST++D+ CK
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ ++ A Y +M + P+ TYT+LI C +G L +A L N+M+ + +V T
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+D LC ++KEA+ + M G P++ +Y++L+ G+ +++A ++ N +
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ PD+ Y I GLC ++ ++ A + +M I N + Y++L+D KSG +
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTIL 346
+ L++EM + V+T+ L+D LCKN V A+ ++ + G+ N +T +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+DGLCK +++ A +F+ ++ KG D YT +++G K G EALAL KM + G
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ + Y +++ L KA L +MI G+
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 232/474 (48%), Gaps = 54/474 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P F+ F+ L+ AI +M RV P + N L++ + LG+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV--- 246
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
KR ++ D I G A+P V Y+ +ID +CK+ V A L+ EM +
Sbjct: 247 -----KRFFK-DMI---------GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 291
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ PD VTY ++I GF VG+L + V +M PDV T++ L++ CK GK+
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
M G KP+VV+YS+L+D +C + +A + M R+ L P+ +Y+ +I+
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
CKI + DA L +M + NVVTY++LIDGLC + R+ +A EL +M + G+ PN
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
+ +Y++L+ K ++D A+ L+ ++K +GI P++ Y + GLC +++ A+ V
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 365 DL--------------LIKGY-----------------NLDVR----TYTIMINGLCKDG 389
++ L+ Y LD+ T+ ++I+GLCK+
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Query: 390 LFDEALALMSKME-DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
L +A+ +++ D G NA + +I L + + A L QM+ +GL+
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 190/369 (51%), Gaps = 1/369 (0%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P ++ + L ++ +A +S+M R+ P + L+ F +G+ +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
M+ P V+T++I++D +CKEG V+ A+ + M G PD VTY+S++DG+
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
V ++ F M M PDV +Y+ +IN CK + L +++M + PNVV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
YS+L+D CK G + A + +M GL PN TY+SL+DA CK ++ +A L +M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
G+ NV TYT L+DGLC R+K+A+E+F + G ++ +Y +I+G K D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL-LTGLFYATEF 451
AL L+++++ G P+ + Y I+ L + A+ ++ +M G+ L Y T
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 452 EAVEELSAP 460
+A + P
Sbjct: 550 DAYFKSGNP 558
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 50/268 (18%)
Query: 225 TMTRMELAPDVQSYSI-------------------------------------------- 240
+MTR V+SY I
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 241 ------MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
+ + L + M+++A+ F +M + P + + L+ K G+ D
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
+M G P V TY+ ++D +CK V+ A L ++MK +G++P+ TY ++DG K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 355 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYE 414
RL D F+++ DV TY +IN CK G L +M+ NG PN V+Y
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 415 IIIYALFQKGDNDKAEKLLRQMIARGLL 442
++ A ++G +A K M GL+
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 184/306 (60%), Gaps = 13/306 (4%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP------------DTIT-FNTIIKI 86
PD+ TF L+N C G++ A +++ + + G+QP DT + N + K+
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKM 67
Query: 87 QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
+ + VV+Y+ IID LCKD A NL++EM K I PDV+TY+ +I FC G+
Sbjct: 68 EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
+A LL M+ + INPDV TFS L++AL KEGKV EA+ + M++ G P +TY+S+
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSM 187
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
+DG+C + +N A+ + ++M +PDV ++S +ING CK K VD+ + +F +MH I
Sbjct: 188 IDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 247
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 326
N VTY++LI G C+ G + A +L+N M S G+ PN IT+ S+L +LC + A +
Sbjct: 248 VANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFA 307
Query: 327 LIKKMK 332
+++ ++
Sbjct: 308 ILEDLQ 313
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 182/316 (57%), Gaps = 4/316 (1%)
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M+ PDVVT+TTL++G C G++ +A+ L+++MV + P + +++ LCK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+ A N+L+ M + K VV Y++++D C A+++F M + PDV +YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
MI+ C+ DA L + M I P+VVT+S+LI+ L K G++S+A E+ +M RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+ P ITY+S++D CK +++A ++ M + P+V T++ L++G CK R+ +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
E+F ++ +G + TYT +I+G C+ G D A L++ M +G PN +T++ ++ +L
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 421 FQKGDNDKAEKLLRQM 436
K + KA +L +
Sbjct: 297 CSKKELRKAFAILEDL 312
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 171/311 (54%), Gaps = 4/311 (1%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+PDVV ++T+++ LC + V A L M+ + P Y T+I+G C +G + A+
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
LL++M I V ++ ++D LCK+G A+N+ M G PDV+TYS ++D +C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
AE + M ++ PDV ++S +IN L K V +A ++ M I P +
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY+S+IDG CK R++DA +++ M S+ P+V+T+S+L++ CK VDN + + +M
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+GI+ N TYT L+ G C+ G L AQ++ ++ G + T+ M+ LC
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 392 DEALALMSKME 402
+A A++ ++
Sbjct: 303 RKAFAILEDLQ 313
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 161/286 (56%), Gaps = 4/286 (1%)
Query: 156 MVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 215
MV PDV TF+ L++ LC EG+V +A ++ M++ G +P Y ++++G C + +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 216 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
A ++ + M + V Y+ +I+ LCK A NLF +MH + I P+V+TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 276 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
+ID C+SGR +DA +L+ +M R + P+V+T+S+L++AL K V A + M +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
I P TY ++DG CK RL DA+ + + K + DV T++ +ING CK D +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ +M G N VTY +I+ Q GD D A+ LL MI+ G+
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 144/288 (50%), Gaps = 18/288 (6%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+ L K +A++L +M+ + + +N +I+ C G A ++ +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+G PD IT YS +IDS C+ DA L +M+ ++I+PD
Sbjct: 104 DKGIFPDVIT------------------YSGMIDSFCRSGRWTDAEQLLRDMIERQINPD 145
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VVT++ LI+ G++ EA + M+ + I P T++ ++D CK+ ++ +AK +L
Sbjct: 146 VVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLD 205
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M PDVVT+S+L++GYC V+ +IF M R + + +Y+ +I+G C++
Sbjct: 206 SMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
+D A +L M + + PN +T+ S++ LC + A+ ++ ++
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 127/241 (52%), Gaps = 17/241 (7%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ +N L K H+ A +L +M + + PD+ T++ +I+ +C G+ T A +L
Sbjct: 76 VVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR 135
Query: 67 NIFKRGYQPDTITFNTIIKI---QGKLAQ--------------PDVVMYSTIIDSLCKDK 109
++ +R PD +TF+ +I +GK+++ P + Y+++ID CK
Sbjct: 136 DMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD 195
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
+NDA + M +K SPDVVT++TLI+G+C ++ + + +M + I + T++
Sbjct: 196 RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 255
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L+ C+ G + A+++L VMI G P+ +T+ S++ C E+ KA I + +
Sbjct: 256 TLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Query: 230 E 230
E
Sbjct: 316 E 316
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 245/492 (49%), Gaps = 54/492 (10%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N + K A+ L+ +M L T+ ILI+ +C G++ A
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 65 LCNIFKRGYQPDTITFNTIIK--------IQGKLA---------QPDVVMYSTIIDSLCK 107
L + G + D + + ++I+ +GK P + Y+T+I CK
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +A ++ M+ + + P+V TYT LI G C VG+ KEA+ LLN M+ K P+ T
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++I+++ LCK+G V +A ++ +M K +PD +TY+ L+ G C ++++A + M
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 228 RME--LAPDVQSYSIMINGLCKIKM----------------------------------- 250
+ PDV SY+ +I+GLCK
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
V+ A+ L+KQ+ I N TY+++IDG CK+G ++ A L+ +M L P+V Y+
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
LL +LCK +D A L ++M+ P+V ++ I++DG K G +K A+ + + G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 371 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
+ D+ TY+ +IN K G DEA++ KM D+G P+A + ++ +G+ DK
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 431 KLLRQMIARGLL 442
+L+++++ + ++
Sbjct: 655 ELVKKLVDKDIV 666
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 237/457 (51%), Gaps = 23/457 (5%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA--------- 61
N L + A+SL ++M +MPD+F++N +I +C ++ A
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 62 ---------FSVLCNIF-KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLV 111
+ +L + F K G + + F +K G + D+V+Y+++I C +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG--LEADLVVYTSLIRGFCDCGEL 263
Query: 112 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
+ L+ E+L + SP +TY TLI GFC +GQLKEA + M+ + + P+VYT++ L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
+D LC GK KEA +L +MI+ E+P+ VTY+ +++ C V A +I M +
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN--ITPNVVTYSSLIDGLCKSGRISDA 289
PD +Y+I++ GLC +D+A L M ++ P+V++Y++LI GLCK R+ A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
++ + + + + +T + LL++ K V+ A+ L K++ I+ N TYT ++DG
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
CK G L A+ + + + V Y +++ LCK+G D+A L +M+ + P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
V++ I+I + GD AE LL M GL LF
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 228/429 (53%), Gaps = 22/429 (5%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N LV+++++ A S ++M + + + L+ CY + + AF VL + K
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
RG+ + N ++K LC++ A +L EM + PDV
Sbjct: 136 RGFAFNVYNHNILLK------------------GLCRNLECGKAVSLLREMRRNSLMPDV 177
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
+Y T+I GFC +L++A+ L N+M + + T+ IL+DA CK GK+ EA L
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE 237
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M G + D+V Y+SL+ G+C E+++ + +F+ + +P +Y+ +I G CK+
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
+ +A +F+ M + PNV TY+ LIDGLC G+ +A +L+N M + PN +TY+
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
+++ LCK+ V +A+ +++ MK + P+ TY ILL GLC G L +A ++ L++K
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY-LMLKD 416
Query: 371 YNL---DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDND 427
+ DV +Y +I+GLCK+ +AL + + + + VT I++ + + GD +
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 428 KAEKLLRQM 436
KA +L +Q+
Sbjct: 477 KAMELWKQI 485
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 179/324 (55%)
Query: 114 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVD 173
A++ Y +ML + V+ + L+ + + + A G+L M+ + +VY +IL+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 174 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
LC+ + +A ++L M + PDV +Y++++ G+C E+ KA ++ N M +
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
+ ++ I+I+ CK +D+A+ K+M + ++V Y+SLI G C G + L
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
+E+ RG P ITY++L+ CK + A + + M +G+ PNVYTYT L+DGLC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G+ K+A ++ ++ K + TY I+IN LCKDGL +A+ ++ M+ P+ +TY
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 414 EIIIYALFQKGDNDKAEKLLRQMI 437
I++ L KGD D+A KLL M+
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLML 414
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 188/401 (46%), Gaps = 54/401 (13%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK-------------- 85
P T+N LI +C LGQ+ A + + +RG +P+ T+ +I
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 86 ---IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
+ K +P+ V Y+ II+ LCKD LV DA + M +R PD +TY L+ G C
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 143 VGQLKEAVGLLNQMVLKS--INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
G L EA LL M+ S +PDV +++ L+ LCKE ++ +A ++ ++++ D
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 201 VT-----------------------------------YSSLMDGYCLVNEVNKAEDIFNT 225
VT Y++++DG+C +N A+ +
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M EL P V Y+ +++ LCK +D A LF++M +N P+VV+++ +IDG K+G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
I A L+ M GL P++ TYS L++ K ++D AIS KM G P+ +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 386
+L G E+ + L+ K LD +++ +C
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 1/295 (0%)
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
QLK AV + Q V S + + + L+ L + + A + M++ + V+ S
Sbjct: 53 QLKNAVSVFQQAV-DSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
L++ Y + + A + M + A +V +++I++ GLC+ A++L ++M
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
++ P+V +Y+++I G C+ + A EL NEM G +++T+ L+DA CK +D A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
+ +K+MK G+ ++ YT L+ G C G L + +F ++L +G + TY +I G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
CK G EA + M + G PN TY +I L G +A +LL MI +
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 157/347 (45%), Gaps = 16/347 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N L K A A+ + + M RR PD T+NIL+ C G + A +
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L + K D PDV+ Y+ +I LCK+ ++ A ++Y ++ K
Sbjct: 410 LYLMLKDSSYTD----------------PDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ D VT L++ G + +A+ L Q+ I + T++ ++D CK G + A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
K +L M +P V Y+ L+ C +++A +F M R PDV S++IMI+G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
K + A +L M ++P++ TYS LI+ K G + +A ++M G P+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
S+L D L+KK+ + I+ + ++D +C
Sbjct: 634 AHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 13/306 (4%)
Query: 155 QMVLKSINPDVYTFSILVDALCK-EGKVK--------EAKNVLAVMIKGGEKPDVVTYS- 204
+V K +NP VY S LV+A + E K++ + KN ++V + + + ++
Sbjct: 18 HVVRKLLNPRVY--SKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAG 75
Query: 205 -SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+LM A + M + + S S ++ +++ A + M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
NV ++ L+ GLC++ A L+ EM L P+V +Y++++ C+ ++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
A+ L +MK G ++ T+ IL+D CK G++ +A +++ G D+ YT +I
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
G C G D AL ++ + G +P A+TY +I + G +A ++ MI RG+
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 444 GLFYAT 449
++ T
Sbjct: 316 NVYTYT 321
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 228/458 (49%), Gaps = 40/458 (8%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ ++ + K + M P FN L++ YC G + A+ +
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDK------LVNDAYNLY 118
L + K G+ P V+Y+ +I S+C DK L++ A Y
Sbjct: 395 LKKMVKCGH------------------MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAY 436
Query: 119 SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKE 178
SEMLA + + + ++ C G+ ++A ++ +M+ + PD T+S +++ LC
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 179 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 238
K++ A + M +GG DV TY+ ++D +C + +A FN M + P+V +Y
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 239 SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM-H 297
+ +I+ K K V A LF+ M +E PN+VTYS+LIDG CK+G++ A ++ M
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616
Query: 298 SRGLP---------------PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
S+ +P PNV+TY +LLD CK+H V+ A L+ M +G PN
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
Y L+DGLCK G+L +AQEV ++ G+ + TY+ +I+ K D A ++SKM
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+N C PN V Y +I L + G D+A KL++ M +G
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 222/497 (44%), Gaps = 68/497 (13%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++K L A L ++M ++ D++T+ I+++ +C G I A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
+ + G P+ +T+ +I K + P++V YS +ID CK
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 108 DKLVNDAYNLYSEMLAKRISPDV----------------VTYTTLISGFCIVGQLKEAVG 151
V A ++ M + PDV VTY L+ GFC +++EA
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
LL+ M ++ P+ + L+D LCK GK+ EA+ V M + G + TYSSL+D Y
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
V + A + + M AP+V Y+ MI+GLCK+ D+A L + M + PNVV
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY+++IDG G+I EL+ M S+G+ PN +TY L+D CKN +D A +L+++M
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 332 KHQ------------------------GIL---------PNVYTYTILLDGLCKGGRLKD 358
K G+L P + Y +L+D L K RL+
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 359 AQEVFQDLLIKGYNL--DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
A + +++ L TY +I LC + A L S+M G P ++ +
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 417 IYALFQKGDNDKAEKLL 433
I LF+ +A LL
Sbjct: 961 IKGLFRNSKISEALLLL 977
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 215/508 (42%), Gaps = 106/508 (20%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI------------------ 86
N+L+ +C G + A L + ++P T+N +I+
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 87 --------------------QGKLAQ-----------PDVVMYSTIIDSLCKDKLVNDAY 115
GK + PD V Y+ +I LC+ L +A
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
+ + M A P+VVTY+TL+ G QL +LN M+++ P F+ LV A
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAY 382
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC------------------------ 211
C G A +L M+K G P V Y+ L+ C
Sbjct: 383 CTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA 442
Query: 212 --LVNEVN---------------KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
++N++N KA + M PD +YS ++N LC ++ A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
LF++M + +V TY+ ++D CK+G I A + NEM G PNV+TY++L+ A
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ---------- 364
K V A L + M +G LPN+ TY+ L+DG CK G+++ A ++F+
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 365 -DLLIKGYN-----LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
D+ K Y+ +V TY +++G CK +EA L+ M GC PN + Y+ +I
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 419 ALFQKGDNDKAEKLLRQMIARGLLTGLF 446
L + G D+A+++ +M G L+
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 173/394 (43%), Gaps = 48/394 (12%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK----RISPDVVTYTTLISGFCIVGQLKEA 149
D ++ ++ L + N ++++ E L + R P TY LI F +L A
Sbjct: 195 DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSA 254
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
+ +M L ++ D +T +LCK GK +EA L ++ PD V Y+ L+ G
Sbjct: 255 SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISG 311
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
C + +A D N M P+V +YS ++ G K + + M E P+
Sbjct: 312 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 371
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY--------------------- 308
++SL+ C SG S A++L+ +M G P + Y
Sbjct: 372 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 309 --------------------SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
SS LC + A S+I++M QG +P+ TY+ +L+
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
LC +++ A +F+++ G DV TYTIM++ CK GL ++A ++M + GCTP
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 409 NAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
N VTY +I+A + A +L M++ G L
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 176/351 (50%), Gaps = 21/351 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ + K+ A L M P+ ++ LI+ C +G++ A V
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 65 LCNIFKRGYQPDTITFNTII-------------KIQGKLAQ----PDVVMYSTIIDSLCK 107
+ + G+ T++++I K+ K+ + P+VV+Y+ +ID LCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
++AY L M K P+VVTYT +I GF ++G+++ + LL +M K + P+ T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ +L+D CK G + A N+L M + Y +++G+ E ++ + + +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 874
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT--PNVVTYSSLIDGLCKSGR 285
+ + AP + Y ++I+ L K + ++ AL L +++ T + T TY+SLI+ LC + +
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
+ A++L +EM +G+ P + ++ SL+ L +N + A+ L+ + H I
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEI 985
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P ++ + + L K A L Q M+ + P++ T+ +I+ + +G+I +
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+L + +G P+ +T Y +ID CK+ ++ A+NL EM
Sbjct: 801 LLERMGSKGVAPNYVT------------------YRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
Y +I GF + E++GLL+++ P + + +L+D L K +++
Sbjct: 843 THWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 184 AKNVL-AVMIKGGEKPDV-VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
A +L V D TY+SL++ CL N+V A +F+ MT+ + P++QS+ +
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 242 INGLCKIKMVDDALNLF 258
I GL + + +AL L
Sbjct: 961 IKGLFRNSKISEALLLL 977
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 206/400 (51%), Gaps = 16/400 (4%)
Query: 53 CHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK----------------IQGKLAQPDVV 96
C G + +L + ++GY PD I +IK I K QPDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
Y+ +I+ CK ++DA + M +K SPD VTY +I C G+L A+ +LNQ+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+ + P V T++IL++A EG V EA ++ M+ G KPD+ TY++++ G C V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
++A ++ + PDV SY+I++ L ++ L +M +E PNVVTYS L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I LC+ G+I +A L+ M +GL P+ +Y L+ A C+ +D AI ++ M G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
LP++ Y +L LCK G+ A E+F L G + + +Y M + L G AL
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
++ +M NG P+ +TY +I L ++G D+A +LL M
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 233/451 (51%), Gaps = 18/451 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P +I K ++ A+ + + ++ + PD+F +N LIN +C + +I A
Sbjct: 121 NPDVILCTKLIKGFFTLRNIPKAVRVMEILE-KFGQPDVFAYNALINGFCKMNRIDDATR 179
Query: 64 VLCNIFKRGYQPDTITFNTIIKI---QGKL--------------AQPDVVMYSTIIDSLC 106
VL + + + PDT+T+N +I +GKL QP V+ Y+ +I++
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ V++A L EML++ + PD+ TY T+I G C G + A ++ + LK PDV
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVI 299
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
+++IL+ AL +GK +E + ++ M P+VVTYS L+ C ++ +A ++ M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
L PD SY +I C+ +D A+ + M ++ P++V Y++++ LCK+G+
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
A E+ ++ G PN +Y+++ AL + A+ +I +M GI P+ TY +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+ LC+ G + +A E+ D+ ++ V TY I++ G CK ++A+ ++ M NGC
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
PN TY ++I + G +A +L ++
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 178/302 (58%), Gaps = 1/302 (0%)
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
C G E++ LL MV K NPDV + L+ + +A V+ ++ K G+ PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
Y++L++G+C +N ++ A + + M + +PD +Y+IMI LC +D AL + Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
+ ++N P V+TY+ LI+ G + +A +L++EM SRGL P++ TY++++ +CK
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
VD A +++ ++ +G P+V +Y ILL L G+ ++ +++ + + + +V TY+I
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+I LC+DG +EA+ L+ M++ G TP+A +Y+ +I A ++G D A + L MI+ G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 441 LL 442
L
Sbjct: 399 CL 400
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 122/243 (50%), Gaps = 17/243 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ ++ T+L + A++L + M + + PD ++++ LI +C G++ A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 65 LCNIFKRGYQPDTITFNTII-------------KIQGKLAQ----PDVVMYSTIIDSLCK 107
L + G PD + +NT++ +I GKL + P+ Y+T+ +L
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
A ++ EM++ I PD +TY ++IS C G + EA LL M +P V T
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++I++ CK ++++A NVL M+ G +P+ TY+ L++G +A ++ N +
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Query: 228 RME 230
R++
Sbjct: 571 RID 573
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
+Q H++++ + C+SG ++ L+ M +G P+VI + L+
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
++ A+ +++ ++ G P+V+ Y L++G CK R+ DA V + K ++ D TY
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
IMI LC G D AL +++++ + C P +TY I+I A +G D+A KL+ +M++
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 439 RGLLTGLF 446
RGL +F
Sbjct: 257 RGLKPDMF 264
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 227/438 (51%), Gaps = 20/438 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +N + V+ K + SL + V P+L T+N+LI C + A
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L ++K G++PD + YST+I+ L K ++DA L+ EM +
Sbjct: 172 LDWMWKEGFKPDVFS------------------YSTVINDLAKAGKLDDALELFDEMSER 213
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL-KSINPDVYTFSILVDALCKEGKVKE 183
++PDV Y LI GF K A+ L ++++ S+ P+V T +I++ L K G+V +
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
+ M + + D+ TYSSL+ G C V+KAE +FN + + + DV +Y+ M+
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
G C+ + ++L L++ M +N + N+V+Y+ LI GL ++G+I +A + M ++G
Sbjct: 334 GFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+ TY + LC N +V+ A+ ++++++ G +VY Y ++D LCK RL++A +
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+++ G L+ +I GL +D EA + +M NGC P V+Y I+I L +
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 424 GDNDKAEKLLRQMIARGL 441
G +A +++M+ G
Sbjct: 513 GKFGEASAFVKEMLENGW 530
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 232/455 (50%), Gaps = 19/455 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + ++ L K A+ L +M R V PD+ +NILI+ + +A +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 65 LCNIFK-RGYQPDTITFNTII-------------KIQGKLAQ----PDVVMYSTIIDSLC 106
+ + P+ T N +I KI ++ Q D+ YS++I LC
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
V+ A ++++E+ ++ S DVVTY T++ GFC G++KE++ L M K+ + ++
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIV 360
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
+++IL+ L + GK+ EA + +M G D TY + G C+ VNKA + +
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
DV +Y+ +I+ LCK K +++A NL K+M + N ++LI GL + R+
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A + EM G P V++Y+ L+ LCK A + +K+M G P++ TY+IL
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
L GLC+ ++ A E++ L G DV + I+I+GLC G D+A+ +M+ ME C
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
T N VTY ++ F+ GD+++A + M GL
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 212/435 (48%), Gaps = 16/435 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + N + L K + + ++M DL+T++ LI+ C G + A SV
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 65 LCNIFKRGYQPDTITFNTII-------KIQGKLA---------QPDVVMYSTIIDSLCKD 108
+ +R D +T+NT++ KI+ L ++V Y+ +I L ++
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLEN 372
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
+++A ++ M AK + D TY I G C+ G + +A+G++ ++ + DVY +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
+ ++D LCK+ +++EA N++ M K G + + ++L+ G + + +A M +
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 229 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
P V SY+I+I GLCK +A K+M P++ TYS L+ GLC+ +I
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A EL ++ GL +V+ ++ L+ LC +D+A++++ M+H+ N+ TY L++
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
G K G A ++ + G D+ +Y ++ GLC A+ ++G P
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 409 NAVTYEIIIYALFQK 423
T+ I++ A+ +
Sbjct: 673 TVYTWNILVRAVVNR 687
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 179/363 (49%), Gaps = 18/363 (4%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
+ S ++ +N + ++ L + M+ + + ++ ++NILI G+I A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEA 378
Query: 62 FSVLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDS 104
+ + +GY D T+ I +++ DV Y++IID
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
LCK K + +A NL EM + + LI G +L EA L +M P
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPT 498
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V +++IL+ LCK GK EA + M++ G KPD+ TYS L+ G C +++ A ++++
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
+ L DV ++I+I+GLC + +DDA+ + M N T N+VTY++L++G K G
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+ A + M+ GL P++I+Y++++ LC V A+ ++ GI P VYT+
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 345 ILL 347
IL+
Sbjct: 679 ILV 681
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 194/396 (48%), Gaps = 54/396 (13%)
Query: 82 TIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC 141
++IK GK + PD + D + E+ P + +Y TL++ F
Sbjct: 83 SVIKTYGKNSMPDQAL---------------DVFKRMREIFG--CEPAIRSYNTLLNAFV 125
Query: 142 IVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
Q + L + P++ T+++L+ CK+ + ++A+ L M K G KPDV
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY----------------------- 238
+YS++++ +++ A ++F+ M+ +APDV Y
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL 245
Query: 239 -------------SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
+IMI+GL K VDD L ++++M ++ TYSSLI GLC +G
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
+ A + NE+ R +V+TY+++L C+ + ++ L + M+H+ + N+ +Y I
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNI 364
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
L+ GL + G++ +A +++ + KGY D TY I I+GLC +G ++AL +M ++E +G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ Y II L +K ++A L+++M G+
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
+ V Y ++ L ++ ++ +V + S+ + S++ KN D A+ +
Sbjct: 42 SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101
Query: 329 KKMKHQ-GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 387
K+M+ G P + +Y LL+ + + + +F G +++TY ++I CK
Sbjct: 102 KRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCK 161
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
F++A + M G P+ +Y +I L + G D A +L +M RG+
Sbjct: 162 KKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 234/489 (47%), Gaps = 53/489 (10%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I +N T L K A+ + ++M + P+L T+NILI+ C G++ +AF +
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
++ K G P+ T N ++ ++ K+ PD + + ++ID L K
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF--------------------------- 140
V+DAY +Y +ML + + YT+LI F
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 141 ------CI--VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
C+ G+ ++ + ++ + PD ++SIL+ L K G E + M
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
+ G D Y+ ++DG+C +VNKA + M P V +Y +I+GL KI +D
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
+A LF++ ++ I NVV YSSLIDG K GRI +A+ ++ E+ +GL PN+ T++SLL
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 372
DAL K ++ A+ + MK PN TY IL++GLCK + A +Q++ +G
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 373 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKL 432
+YT MI+GL K G EA AL + + NG P++ Y +I L A L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 433 LRQMIARGL 441
+ RGL
Sbjct: 820 FEETRRRGL 828
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 228/488 (46%), Gaps = 51/488 (10%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + L K A+ + + ++ R +P + +N +I Y G+ A+S+
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 65 LCNIFKRGYQPDTITFN---TIIKIQGKL-------------AQPDVVMYSTIIDSLCKD 108
L +G P I +N T ++ GK+ A P++ Y+ +ID LC+
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRA 390
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
++ A+ L M + P+V T ++ C +L EA + +M K PD TF
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM----------DGY-------- 210
L+D L K G+V +A V M+ + + + Y+SL+ DG+
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 211 ---------------CL--VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
C+ E K +F + PD +SYSI+I+GL K ++
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
LF M + + Y+ +IDG CK G+++ A++L+ EM ++G P V+TY S++D
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
L K +D A L ++ K + I NV Y+ L+DG K GR+ +A + ++L+ KG
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
++ T+ +++ L K +EAL M++ CTPN VTY I+I L + +KA
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 434 RQMIARGL 441
++M +G+
Sbjct: 751 QEMQKQGM 758
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 222/454 (48%), Gaps = 18/454 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + H ++L QQM P + F LI + G++ SA S+
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
L + D + +N I GK+ + PD V Y+++I LCK
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+++A ++ + R P Y T+I G+ G+ EA LL + K P V
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ ++ L K GKV EA V M K P++ TY+ L+D C +++ A ++ ++M
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ L P+V++ +IM++ LCK + +D+A +F++M + TP+ +T+ SLIDGL K GR+
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
DA+++ +M N I Y+SL+ + ++ + K M +Q P++ +
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
D + K G + + +F+++ + + D R+Y+I+I+GL K G +E L M++ GC
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 584
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ Y I+I + G +KA +LL +M +G
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 218/448 (48%), Gaps = 18/448 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + F K +A+SL +M + D+ +N+ I+ + +G++ A+
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
I G +PD +T+ ++I + K + P Y+T+I
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
++AY+L AK P V+ Y +++ +G++ EA+ + +M K P++ T
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLST 379
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++IL+D LC+ GK+ A + M K G P+V T + ++D C ++++A +F M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
PD ++ +I+GL K+ VDDA ++++M + N + Y+SLI GR
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
D ++ +M ++ P++ ++ +D + K + ++ +++K + +P+ +Y+IL+
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
GL K G + E+F + +G LD R Y I+I+G CK G ++A L+ +M+ G
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
P VTY +I L + D+A L +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 183/356 (51%), Gaps = 18/356 (5%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + N + + K ++ +++ RR +PD +++ILI+
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH------------- 560
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ K G+ +T +K QG + D Y+ +ID CK VN AY L EM
Sbjct: 561 ---GLIKAGFANETYELFYSMKEQGCVL--DTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K P VVTY ++I G + +L EA L + K I +V +S L+D K G++ E
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A +L +++ G P++ T++SL+D E+N+A F +M ++ P+ +Y I+IN
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
GLCK++ + A +++M + + P+ ++Y+++I GL K+G I++A L + + G P
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
+ Y+++++ L + +A SL ++ + +G+ + T +LLD L K L+ A
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 181/362 (50%), Gaps = 5/362 (1%)
Query: 80 FNTIIKIQGKLA----QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
F+ + +I G+++ P V ++ K + + Y++ M + P YTT
Sbjct: 114 FDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTT 173
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
LI F V + L QM P V+ F+ L+ KEG+V A ++L M
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
D+V Y+ +D + V +V+ A F+ + L PD +Y+ MI LCK +D+A+
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
+F+ + P Y+++I G +G+ +A+ L+ ++G P+VI Y+ +L L
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
K VD A+ + ++MK PN+ TY IL+D LC+ G+L A E+ + G +V
Sbjct: 354 RKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV 412
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
RT IM++ LCK DEA A+ +M+ CTP+ +T+ +I L + G D A K+ +
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEK 472
Query: 436 MI 437
M+
Sbjct: 473 ML 474
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 144/291 (49%), Gaps = 1/291 (0%)
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+L +M + P V T +V K K++E +V+ +M K +P Y++L+ +
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
VN + +F M + P V ++ +I G K VD AL+L +M + ++ ++V
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
Y+ ID K G++ AW+ +E+ + GL P+ +TY+S++ LCK + +D A+ + + +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+ +P Y Y ++ G G+ +A + + KG V Y ++ L K G
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
DEAL + +M+ + PN TY I+I L + G D A +L M GL
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 112/278 (40%), Gaps = 37/278 (13%)
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 222
P+ Y +LV A C+ +L M G P V T ++ G N++ + D+
Sbjct: 98 PESYNSLLLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDV 155
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
M + + P +Y+ +I + D L LF+QM
Sbjct: 156 VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ-------------------- 195
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
EL G P V +++L+ K VD+A+SL+ +MK + ++
Sbjct: 196 --------EL-------GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVL 240
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
Y + +D K G++ A + F ++ G D TYT MI LCK DEA+ + +E
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
N P Y +I G D+A LL + A+G
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 213 VNEVNKAEDIFNTMTRMELAPDV-QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+ +VN+A + F R P +SY+ ++ + + + D + +M P+V
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
T ++ G K+ ++ + +++V M P Y++L+ A +H D ++L ++M
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+ G P V+ +T L+ G K GR+ A + ++ + D+ Y + I+ K G
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
D A ++E NG P+ VTY +I L + D+A ++ +
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 18/193 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + +N +LVK + A+ Q M + P+ T+ ILIN C + + AF
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ K+G +P TI+ Y+T+I L K + +A L+ A
Sbjct: 749 FWQEMQKQGMKPSTIS------------------YTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
PD Y +I G + +A L + + + T +L+D L K +++
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQ 850
Query: 184 AKNVLAVMIKGGE 196
A V AV+ + G+
Sbjct: 851 AAIVGAVLRETGK 863
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 230/454 (50%), Gaps = 17/454 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + LVK +H+ A+ L M + PD++ + +I C L ++ A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 65 LCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLCK 107
+ ++ G + + +N +I + GK +PDVV Y T++ LCK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ + EML R SP ++L+ G G+++EA+ L+ ++V ++P+++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+D+LCK K EA+ + M K G +P+ VTYS L+D +C +++ A M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
L V Y+ +ING CK + A +M + + P VVTY+SL+ G C G+I+
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A L +EM +G+ P++ T+++LL L + + +A+ L +M + PN TY +++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
+G C+ G + A E +++ KG D +Y +I+GLC G EA + + C
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
N + Y +++ ++G ++A + ++M+ RG+
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 230/441 (52%), Gaps = 20/441 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + +N SL K + + A L +M + P+ T++ILI+ +C G++ +A S
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
L + G KL+ V Y+++I+ CK ++ A +EM+
Sbjct: 424 FLGEMVDTGL---------------KLS---VYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K++ P VVTYT+L+ G+C G++ +A+ L ++M K I P +YTF+ L+ L + G +++
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A + M + KP+ VTY+ +++GYC +++KA + MT + PD SY +I+
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
GLC +A +H N N + Y+ L+ G C+ G++ +A + EM RG+
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+++ Y L+D K+ L+K+M +G+ P+ YT ++D K G K+A ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
++ +G + TYT +INGLCK G +EA L SKM+ PN VTY + + K
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DILTK 764
Query: 424 GDNDKAEKL-LRQMIARGLLT 443
G+ D + + L I +GLL
Sbjct: 765 GEVDMQKAVELHNAILKGLLA 785
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 215/408 (52%), Gaps = 4/408 (0%)
Query: 36 RRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK-RGYQPDTITFNTIIKIQGKLAQPD 94
RRV+ + F ++I L ++ + ++L + K R + FN ++ + +PD
Sbjct: 170 RRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG---IRPD 226
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
V +Y+ +I SLC+ K ++ A + + M A ++V Y LI G C ++ EAVG+
Sbjct: 227 VYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKK 286
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
+ K + PDV T+ LV LCK + + ++ M+ P SSL++G
Sbjct: 287 DLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRG 346
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
++ +A ++ + ++P++ Y+ +I+ LCK + +A LF +M + PN VTYS
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
LID C+ G++ A + EM GL +V Y+SL++ CK + A + +M ++
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
+ P V TYT L+ G C G++ A ++ ++ KG + T+T +++GL + GL +A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+ L ++M + PN VTY ++I ++GD KA + L++M +G++
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 202/416 (48%), Gaps = 12/416 (2%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIID 103
+F ILI+ A S+L + R +P + FN + K + +I
Sbjct: 106 SFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNVLFSCYEKCKLSSSSSFDLLIQ 164
Query: 104 SLCKDKLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN 162
+ + V D ++ M+ K + P+V T + L+ G A+ L N MV I
Sbjct: 165 HYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIR 224
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 222
PDVY ++ ++ +LC+ + AK ++A M G ++V Y+ L+DG C +V +A I
Sbjct: 225 PDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGI 284
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
+ +L PDV +Y ++ GLCK++ + L + +M +P+ SSL++GL K
Sbjct: 285 KKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRK 344
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
G+I +A LV + G+ PN+ Y++L+D+LCK A L +M G+ PN T
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVT 404
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
Y+IL+D C+ G+L A +++ G L V Y +ING CK G A M++M
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG----------LLTGLFYA 448
+ P VTY ++ KG +KA +L +M +G LL+GLF A
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 194/385 (50%), Gaps = 19/385 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P I F + L + A+ L +M V P+ T+N++I YC G ++ AF
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 64 VLCNIFKRGYQPDTITFNTIIK---IQGKLAQPDV--------------VMYSTIIDSLC 106
L + ++G PDT ++ +I + G+ ++ V + Y+ ++ C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
++ + +A ++ EM+ + + D+V Y LI G K GLL +M + + PD
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
++ ++DA K G KEA + +MI G P+ VTY+++++G C VN+AE + + M
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 227 TRMELAPDVQSYSIMINGLCKIKM-VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
+ P+ +Y ++ L K ++ + A+ L + + + N TY+ LI G C+ GR
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGR 802
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
I +A EL+ M G+ P+ ITY+++++ LC+ + V AI L M +GI P+ Y
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNT 862
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKG 370
L+ G C G + A E+ ++L +G
Sbjct: 863 LIHGCCVAGEMGKATELRNEMLRQG 887
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 48 LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-----------------KIQGKL 90
L++ +C G++ A SV + +RG D + + +I ++ +
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 91 AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV 150
+PD V+Y+++ID+ K +A+ ++ M+ + P+ VTYT +I+G C G + EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV-LAVMIKGGEKPDVVTYSSLMDG 209
L ++M S P+ T+ +D L K G+V K V L I G + TY+ L+ G
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+C + +A ++ M ++PD +Y+ MIN LC+ V A+ L+ M + I P+
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
V Y++LI G C +G + A EL NEM +GL PN
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 134/263 (50%), Gaps = 21/263 (7%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+S+ Q+M R V DL + +LI+ F +L + RG +PD + + ++I
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 86 IQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
+ K P+ V Y+ +I+ LCK VN+A L S+M P
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 129 DVVTYTTLISGFCIVGQ--LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
+ VTY + G+ +++AV L N +LK + + T+++L+ C++G+++EA
Sbjct: 751 NQVTYGCFLD-ILTKGEVDMQKAVELHNA-ILKGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
++ MI G PD +TY+++++ C N+V KA +++N+MT + PD +Y+ +I+G C
Sbjct: 809 LITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Query: 247 KIKMVDDALNLFKQMHTENITPN 269
+ A L +M + + PN
Sbjct: 869 VAGEMGKATELRNEMLRQGLIPN 891
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 225/432 (52%), Gaps = 49/432 (11%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
V PD+F N+LI+ +C +G+++ A S+L N ++ D V
Sbjct: 125 VSPDVFALNVLIHSFCKVGRLSFAISLLRN---------------------RVISIDTVT 163
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ-- 155
Y+T+I LC+ L ++AY SEM+ I PD V+Y TLI GFC VG A L+++
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS 223
Query: 156 --------------------------MVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
MV+ +PDV TFS +++ LCK GKV E +L
Sbjct: 224 ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M + P+ VTY++L+D N A +++ M + D+ Y+++++GL K
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ +A FK + +N PNVVTY++L+DGLCK+G +S A ++ +M + + PNV+TYS
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
S+++ K ++ A+SL++KM+ Q ++PN +TY ++DGL K G+ + A E+ +++ +
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G + ++N L + G E L+ M G T + + Y +I F+ GD + A
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523
Query: 430 EKLLRQMIARGL 441
+M RG+
Sbjct: 524 LAWAEEMQERGM 535
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 201/373 (53%), Gaps = 32/373 (8%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNL-YSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
PD +++++I + LV+D +L YS+M+A +SPDV LI FC VG+L A+
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
LL V I+ D T++ ++ LC+ G EA L+ M+K G PD V+Y++L+DG+C
Sbjct: 151 LLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFC 207
Query: 212 ----------LVNEVNK------------------AEDIFNTMTRMELAPDVQSYSIMIN 243
LV+E+++ E+ + M PDV ++S +IN
Sbjct: 208 KVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIIN 267
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
LCK V + L ++M ++ PN VTY++L+D L K+ A L ++M RG+P
Sbjct: 268 RLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPV 327
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+++ Y+ L+D L K + A K + +PNV TYT L+DGLCK G L A+ +
Sbjct: 328 DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+L K +V TY+ MING K G+ +EA++L+ KMED PN TY +I LF+
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 447
Query: 424 GDNDKAEKLLRQM 436
G + A +L ++M
Sbjct: 448 GKEEMAIELSKEM 460
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 236/483 (48%), Gaps = 49/483 (10%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + N S K + AISL + R + D T+N +I+ C G A+
Sbjct: 126 SPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQ 182
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQ------------------------------- 92
L + K G PDT+++NT+I K+
Sbjct: 183 FLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHA 242
Query: 93 --------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
PDVV +S+II+ LCK V + L EM + P+ VTYTTL+
Sbjct: 243 IEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
+ A+ L +QMV++ I D+ +++L+D L K G ++EA+ ++++ + P
Sbjct: 303 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 362
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
+VVTY++L+DG C +++ AE I M + P+V +YS MING K M+++A++L
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
++M +N+ PN TY ++IDGL K+G+ A EL EM G+ N +L++ L +
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRI 482
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
+ L+K M +G+ + YT L+D KGG + A +++ +G DV +Y
Sbjct: 483 GRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSY 542
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
++I+G+ K G A M + G P+ T+ I++ + ++GD++ KL +M +
Sbjct: 543 NVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKS 601
Query: 439 RGL 441
G+
Sbjct: 602 CGI 604
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 211/454 (46%), Gaps = 18/454 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ ++ VK A+SL ++M+ + V+P+ FT+ +I+ G+ A +
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 65 -----LCNIFKRGYQPDTIT-----FNTIIKIQG-------KLAQPDVVMYSTIIDSLCK 107
L + + Y D + I +++G K D + Y+++ID K
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
A EM + + DVV+Y LISG G++ A M K I PD+ T
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIAT 575
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
F+I++++ K+G + + M G KP +++ + ++ C ++ +A I N M
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
ME+ P++ +Y I ++ K K D + + + I + Y++LI LCK G
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 695
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A ++ +M +RG P+ +T++SL+ HV A+S M GI PNV TY ++
Sbjct: 696 KAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 755
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
GL G +K+ + ++ +G D TY +I+G K G ++ + +M +G
Sbjct: 756 RGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 815
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
P TY ++I G +A +LL++M RG+
Sbjct: 816 PKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 200/413 (48%), Gaps = 33/413 (7%)
Query: 37 RVMP-DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDV 95
R MP D+ ++N+LI+ G++ + ++ + ++G +PD TFN ++ Q K +
Sbjct: 533 RGMPWDVVSYNVLISGMLKFGKVGADWAYK-GMREKGIEPDIATFNIMMNSQRKQGDSEG 591
Query: 96 VMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 155
++ L+ +M + I P +++ ++ C G+++EA+ +LNQ
Sbjct: 592 IL------------------KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQ 633
Query: 156 MVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 215
M+L I+P++ T+ I +D K + ++ G K Y++L+ C +
Sbjct: 634 MMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGM 693
Query: 216 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
KA + M PD +++ +++G V AL+ + M I+PNV TY++
Sbjct: 694 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 753
Query: 276 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
+I GL +G I + + ++EM SRG+ P+ TY++L+ K ++ ++++ +M G
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 813
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC--------- 386
++P TY +L+ G++ A+E+ +++ +G + + TY MI+GLC
Sbjct: 814 LVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVE 873
Query: 387 ---KDGLFDEALALMSKM-EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
K EA L+ +M E+ G P T I A + G AE+ L++
Sbjct: 874 WNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 151/284 (53%), Gaps = 21/284 (7%)
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV-NKAEDIFNTMTRMELAPDVQSYSIMI 242
A L+ M G PD ++SL+ + + V ++ I++ M ++PDV + +++I
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
+ CK+ + A++L + I+ + VTY+++I GLC+ G +A++ ++EM G+
Sbjct: 137 HSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P+ ++Y++L+D CK + A +L+ ++ N+ T+TILL L +E
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSYYN---LHAIEEA 246
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
++D+++ G++ DV T++ +IN LCK G E L+ +ME+ PN VTY ++ +LF+
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 423 KGDNDKAEKLLRQMIARG----------LLTGLFYATEFEAVEE 456
A L QM+ RG L+ GLF A + E+
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 226/437 (51%), Gaps = 17/437 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I +N S ++ AI + M + + T+N LI YC GQ +A +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 65 LCNIFKRGYQPDTITFNTII-------------KIQGKL----AQPDVVMYSTIIDSLCK 107
L + G+ + +F ++I + G++ P + +T+I LCK
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ A L+ + L K D T L+ G C G+L EA + +++ + D +
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+ C + K+ EA L M+K G KPD TYS L+ G +N+V +A ++
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
R + PDV +YS+MI+G CK + ++ F +M ++N+ PN V Y+ LI C+SGR+S
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A EL +M +G+ PN TY+SL+ + V+ A L ++M+ +G+ PNV+ YT L+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
DG K G++ + + +++ K + + TYT+MI G +DG EA L+++M + G
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 408 PNAVTYEIIIYALFQKG 424
P+++TY+ IY ++G
Sbjct: 783 PDSITYKEFIYGYLKQG 799
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 234/464 (50%), Gaps = 17/464 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I ++ L + K A + ++M + P++ +N LI+ + G + A +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVV-----------------MYSTIIDSLCK 107
+ +G + T+NT+IK K Q D ++++I LC
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ + A EML + +SP TTLISG C G+ +A+ L Q + K D T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ L+ LC+ GK+ EA + ++ G D V+Y++L+ G C ++++A + M
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ L PD +YSI+I GL + V++A+ + + P+V TYS +IDG CK+ R
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+ E +EM S+ + PN + Y+ L+ A C++ + A+ L + MKH+GI PN TYT L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
G+ R+++A+ +F+++ ++G +V YT +I+G K G + L+ +M
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYATEF 451
PN +TY ++I + G+ +A +LL +M +G++ EF
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 223/463 (48%), Gaps = 17/463 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + F + K A+ L +M+ V P++ TFN +I+ G+ AF
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 64 VLCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLC 106
+ +RG +P IT++ ++K + K P+V++Y+ +IDS
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ +N A + M++K +S TY TLI G+C GQ A LL +M+ N +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
+F+ ++ LC A + M+ P ++L+ G C + +KA +++
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
D ++ + +++GLC+ +D+A + K++ + V+Y++LI G C ++
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A+ ++EM RGL P+ TYS L+ L + V+ AI K G+LP+VYTY+++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+DG CK R ++ QE F +++ K + Y +I C+ G AL L M+ G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
+PN+ TY +I + ++A+ L +M GL +F+ T
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 18/454 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P N TSLV+ + + + + V PD++ F IN +C G++ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ + G P+ +TFNT+I K+ + +P ++ YS ++ L +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K + DAY + EM K P+V+ Y LI F G L +A+ + + MV K ++ T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+ CK G+ A+ +L M+ G + +++S++ C + A M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
++P + +I+GLCK AL L+ Q + + T ++L+ GLC++G++
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+A+ + E+ RG + ++Y++L+ C +D A + +M +G+ P+ YTY+IL+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
GL ++++A + + D G DV TY++MI+G CK +E +M
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
PN V Y +I A + G A +L M +G+
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 212/444 (47%), Gaps = 30/444 (6%)
Query: 25 TAISLSQQMDFRRVMPDLFTFNILINCYCHLGQ------ITSAFSVLCNIFKRGYQPDTI 78
++SL + RR M DL LI YC + F VL N +G P
Sbjct: 176 ASLSLCFDEEIRRKMSDL-----LIEVYCTQFKRDGCYLALDVFPVLAN---KGMFPSKT 227
Query: 79 TFNTIIK----------------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
T N ++ + K PDV +++T I++ CK V +A L+S+M
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
++P+VVT+ T+I G + G+ EA +MV + + P + T+SILV L + ++
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
+A VL M K G P+V+ Y++L+D + +NKA +I + M L+ +Y+ +I
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
G CK D+A L K+M + N +++S+I LC A V EM R +
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P ++L+ LCK+ A+ L + ++G + + T LL GLC+ G+L +A +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
+++L +G +D +Y +I+G C DEA + +M G P+ TY I+I LF
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 423 KGDNDKAEKLLRQMIARGLLTGLF 446
++A + G+L ++
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVY 611
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 186/371 (50%), Gaps = 21/371 (5%)
Query: 23 YATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNT 82
+ +A+ +M R + P LI+ C G+ + A + +G+ DT T N
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 83 II-----------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR 125
++ +I G+ D V Y+T+I C K +++A+ EM+ +
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
+ PD TY+ LI G + +++EA+ + + PDVYT+S+++D CK + +E +
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
M+ +P+ V Y+ L+ YC ++ A ++ M ++P+ +Y+ +I G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
I V++A LF++M E + PNV Y++LIDG K G++ L+ EMHS+ + PN
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG----RLKDAQE 361
ITY+ ++ ++ +V A L+ +M+ +GI+P+ TY + G K G K + E
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 362 VFQDLLIKGYN 372
+I+G+N
Sbjct: 811 ENYAAIIEGWN 821
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 226/437 (51%), Gaps = 17/437 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I +N S ++ AI + M + + T+N LI YC GQ +A +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 65 LCNIFKRGYQPDTITFNTII-------------KIQGKL----AQPDVVMYSTIIDSLCK 107
L + G+ + +F ++I + G++ P + +T+I LCK
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ A L+ + L K D T L+ G C G+L EA + +++ + D +
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+ C + K+ EA L M+K G KPD TYS L+ G +N+V +A ++
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
R + PDV +YS+MI+G CK + ++ F +M ++N+ PN V Y+ LI C+SGR+S
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A EL +M +G+ PN TY+SL+ + V+ A L ++M+ +G+ PNV+ YT L+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
DG K G++ + + +++ K + + TYT+MI G +DG EA L+++M + G
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 408 PNAVTYEIIIYALFQKG 424
P+++TY+ IY ++G
Sbjct: 783 PDSITYKEFIYGYLKQG 799
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 234/464 (50%), Gaps = 17/464 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I ++ L + K A + ++M + P++ +N LI+ + G + A +
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVV-----------------MYSTIIDSLCK 107
+ +G + T+NT+IK K Q D ++++I LC
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ + A EML + +SP TTLISG C G+ +A+ L Q + K D T
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ L+ LC+ GK+ EA + ++ G D V+Y++L+ G C ++++A + M
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ L PD +YSI+I GL + V++A+ + + P+V TYS +IDG CK+ R
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+ E +EM S+ + PN + Y+ L+ A C++ + A+ L + MKH+GI PN TYT L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
G+ R+++A+ +F+++ ++G +V YT +I+G K G + L+ +M
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYATEF 451
PN +TY ++I + G+ +A +LL +M +G++ EF
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 223/463 (48%), Gaps = 17/463 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + F + K A+ L +M+ V P++ TFN +I+ G+ AF
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 64 VLCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLC 106
+ +RG +P IT++ ++K + K P+V++Y+ +IDS
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ +N A + M++K +S TY TLI G+C GQ A LL +M+ N +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
+F+ ++ LC A + M+ P ++L+ G C + +KA +++
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
D ++ + +++GLC+ +D+A + K++ + V+Y++LI G C ++
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A+ ++EM RGL P+ TYS L+ L + V+ AI K G+LP+VYTY+++
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+DG CK R ++ QE F +++ K + Y +I C+ G AL L M+ G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
+PN+ TY +I + ++A+ L +M GL +F+ T
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 719
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 18/454 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P N TSLV+ + + + + V PD++ F IN +C G++ A +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ + G P+ +TFNT+I K+ + +P ++ YS ++ L +
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K + DAY + EM K P+V+ Y LI F G L +A+ + + MV K ++ T
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+ CK G+ A+ +L M+ G + +++S++ C + A M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
++P + +I+GLCK AL L+ Q + + T ++L+ GLC++G++
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+A+ + E+ RG + ++Y++L+ C +D A + +M +G+ P+ YTY+IL+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
GL ++++A + + D G DV TY++MI+G CK +E +M
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
PN V Y +I A + G A +L M +G+
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 212/444 (47%), Gaps = 30/444 (6%)
Query: 25 TAISLSQQMDFRRVMPDLFTFNILINCYCHLGQ------ITSAFSVLCNIFKRGYQPDTI 78
++SL + RR M DL LI YC + F VL N +G P
Sbjct: 176 ASLSLCFDEEIRRKMSDL-----LIEVYCTQFKRDGCYLALDVFPVLAN---KGMFPSKT 227
Query: 79 TFNTIIK----------------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
T N ++ + K PDV +++T I++ CK V +A L+S+M
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
++P+VVT+ T+I G + G+ EA +MV + + P + T+SILV L + ++
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
+A VL M K G P+V+ Y++L+D + +NKA +I + M L+ +Y+ +I
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
G CK D+A L K+M + N +++S+I LC A V EM R +
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P ++L+ LCK+ A+ L + ++G + + T LL GLC+ G+L +A +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
+++L +G +D +Y +I+G C DEA + +M G P+ TY I+I LF
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 423 KGDNDKAEKLLRQMIARGLLTGLF 446
++A + G+L ++
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVY 611
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 186/371 (50%), Gaps = 21/371 (5%)
Query: 23 YATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNT 82
+ +A+ +M R + P LI+ C G+ + A + +G+ DT T N
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 83 II-----------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR 125
++ +I G+ D V Y+T+I C K +++A+ EM+ +
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
+ PD TY+ LI G + +++EA+ + + PDVYT+S+++D CK + +E +
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
M+ +P+ V Y+ L+ YC ++ A ++ M ++P+ +Y+ +I G+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
I V++A LF++M E + PNV Y++LIDG K G++ L+ EMHS+ + PN
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG----RLKDAQE 361
ITY+ ++ ++ +V A L+ +M+ +GI+P+ TY + G K G K + E
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 362 VFQDLLIKGYN 372
+I+G+N
Sbjct: 811 ENYAAIIEGWN 821
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 231/413 (55%), Gaps = 23/413 (5%)
Query: 16 SLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP 75
+L+K A + ++M R++ P++FTFN++IN C G++ A V+ ++
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM------- 249
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLCK---DKLVNDAYNLYSEMLAKRISPDVVT 132
K+ G P+VV Y+T+ID CK + + A + EM+ +SP++ T
Sbjct: 250 ---------KVYG--CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTT 298
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
+ LI GF L ++ + +M+ + + P+V +++ L++ LC GK+ EA ++ M+
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
G +P+++TY++L++G+C + + +A D+F ++ P + Y+++I+ CK+ +D
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
D L ++M E I P+V TY+ LI GLC++G I A +L +++ S+GL P+++T+ L+
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILM 477
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI-KGY 371
+ C+ A L+K+M G+ P TY I++ G CK G LK A + + +
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
++V +Y +++ G + G ++A L+++M + G PN +TYEI+ + +G
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 205/355 (57%), Gaps = 5/355 (1%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG---QLKE 148
QP+V ++ +I++LCK +N A ++ +M SP+VV+Y TLI G+C +G ++ +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 149 AVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
A +L +MV ++P++ TF+IL+D K+ + + V M+ KP+V++Y+SL++
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
G C ++++A + + M + P++ +Y+ +ING CK M+ +AL++F + + P
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
Y+ LID CK G+I D + L EM G+ P+V TY+ L+ LC+N +++ A L
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
++ +G LP++ T+ IL++G C+ G + A + +++ G TY I++ G CK+
Sbjct: 460 DQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 389 GLFDEALALMSKME-DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
G A + ++ME + N +Y +++ QKG + A LL +M+ +GL+
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 187/290 (64%), Gaps = 4/290 (1%)
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
+M+ + I P+V+TF+++++ALCK GK+ +A++V+ M G P+VV+Y++L+DGYC +
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 215 ---EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
++ KA+ + M +++P++ +++I+I+G K + ++ +FK+M +++ PNV+
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
+Y+SLI+GLC G+IS+A + ++M S G+ PN+ITY++L++ CKN + A+ + +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
K QG +P Y +L+D CK G++ D + +++ +G DV TY +I GLC++G
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ A L ++ G P+ VT+ I++ +KG++ KA LL++M GL
Sbjct: 453 EAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 194/336 (57%), Gaps = 4/336 (1%)
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
+L K+ D +Y EM+ ++I P+V T+ +I+ C G++ +A ++ M + +P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 164 DVYTFSILVDALCK---EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
+V +++ L+D CK GK+ +A VL M++ P++ T++ L+DG+ + + +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+F M ++ P+V SY+ +INGLC + +A+++ +M + + PN++TY++LI+G
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
CK+ + +A ++ + +G P Y+ L+DA CK +D+ +L ++M+ +GI+P+V
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
TY L+ GLC+ G ++ A+++F L KG D+ T+ I++ G C+ G +A L+ +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 401 MEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
M G P +TY I++ ++G+ A + QM
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 156/275 (56%), Gaps = 5/275 (1%)
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
L+ AL KE + + + V MI+ +P+V T++ +++ C ++NKA D+ M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 231 LAPDVQSYSIMINGLCKI----KMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+P+V SY+ +I+G CK+ KM A + K+M +++PN+ T++ LIDG K +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMY-KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+ ++ EM + + PNVI+Y+SL++ LC + AIS+ KM G+ PN+ TY L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
++G CK LK+A ++F + +G R Y ++I+ CK G D+ AL +ME G
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
P+ TY +I L + G+ + A+KL Q+ ++GL
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 158/303 (52%), Gaps = 19/303 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + FN K + ++ + ++M + V P++ ++N LIN C+ G+I+ A S
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
+ + G QP+ IT+N +I ++G+ A P MY+ +ID+ C
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K ++D + L EM + I PDV TY LI+G C G ++ A L +Q+ K + PD+
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLV 471
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TF IL++ C++G+ ++A +L M K G KP +TY+ +M GYC + A ++ M
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 227 TR-MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
+ L +V SY++++ G + ++DA L +M + + PN +TY + + + G
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGF 591
Query: 286 ISD 288
+ D
Sbjct: 592 VPD 594
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 142/276 (51%), Gaps = 13/276 (4%)
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G K ++ LM N E ++ M R ++ P+V +++++IN LCK ++ A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCK---SGRISDAWELVNEMHSRGLPPNVITYSSL 311
++ + M +PNVV+Y++LIDG CK +G++ A ++ EM + PN+ T++ L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+D K+ ++ ++ + K+M Q + PNV +Y L++GLC GG++ +A + ++ G
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEK 431
++ TY +ING CK+ + EAL + ++ G P Y ++I A + G D
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 432 LLRQMIARG----------LLTGLFYATEFEAVEEL 457
L +M G L+ GL EA ++L
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 93/177 (52%), Gaps = 3/177 (1%)
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
+N+ N + L+ + R +E G + ++ L+ AL K + +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
+ K+M + I PNV+T+ ++++ LCK G++ A++V +D+ + G + +V +Y +I+
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 384 GLCK---DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
G CK +G +A A++ +M +N +PN T+ I+I ++ + + K+ ++M+
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 238/504 (47%), Gaps = 51/504 (10%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P FN +L + A L +M + P+ FTF IL+ YC G
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
+L + G P+ + +NTI+ K++ + PD+V +++ I +LC
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 107 KDKLVNDAYNLYSEMLAKRI----SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN 162
K+ V DA ++S+M P+ +TY ++ GFC VG L++A L +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 222
+ +++I + L + GK EA+ VL M G P + +Y+ LMDG C + ++ A+ I
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
M R + PD +Y +++G C + VD A +L ++M N PN T + L+ L K
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG------- 335
GRIS+A EL+ +M+ +G + +T + ++D LC + +D AI ++K M+ G
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 336 ----------------ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
LP++ TY+ LL+GLCK GR +A+ +F +++ + D Y
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
I I+ CK G A ++ ME GC + TY +I L K + L+ +M +
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 440 GLL-------TGLFYATEFEAVEE 456
G+ T + Y E E VE+
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVED 647
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 228/464 (49%), Gaps = 45/464 (9%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N S +K + L + M + P +TFN+LI C + +A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ ++G +P+ TF +++ CK L + L + M +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVR------------------GYCKAGLTDKGLELLNAMESF 211
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ P+ V Y T++S FC G+ ++ ++ +M + + PD+ TF+ + ALCKEGKV +A
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 185 KNVLAVM----IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+ + M G +P+ +TY+ ++ G+C V + A+ +F ++ + +QSY+I
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
+ GL + +A + KQM + I P++ +Y+ L+DGLCK G +SDA +V M G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+ P+ +TY LL C VD A SL+++M LPN YT ILL L K GR+ +A+
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME------------------ 402
E+ + + KGY LD T I+++GLC G D+A+ ++ M
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 403 -----DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+N C P+ +TY ++ L + G +A+ L +M+ L
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 233/486 (47%), Gaps = 45/486 (9%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVM----PDLFTFNILINCYCHLGQITS 60
P I+ FN ++L K A + M+ + P+ T+N+++ +C +G +
Sbjct: 250 PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLED 309
Query: 61 AFSVL--------------CNIFKRG--YQPDTITFNTIIK-IQGKLAQPDVVMYSTIID 103
A ++ NI+ +G I T++K + K P + Y+ ++D
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
LCK +++DA + M + PD VTY L+ G+C VG++ A LL +M+ + P
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
+ YT +IL+ +L K G++ EA+ +L M + G D VT + ++DG C E++KA +I
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 224 NTMTRMELA-----------------------PDVQSYSIMINGLCKIKMVDDALNLFKQ 260
M A PD+ +YS ++NGLCK +A NLF +
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
M E + P+ V Y+ I CK G+IS A+ ++ +M +G ++ TY+SL+ L +
Sbjct: 550 MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQ 609
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
+ L+ +MK +GI PN+ TY + LC+G +++DA + +++ K +V ++
Sbjct: 610 IFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKY 669
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+I CK FD A + + + C Y ++ L G KA +LL ++ RG
Sbjct: 670 LIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG 728
Query: 441 LLTGLF 446
G F
Sbjct: 729 FELGTF 734
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 202/399 (50%), Gaps = 4/399 (1%)
Query: 46 NILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSL 105
N++++ +++S SV+ K + +++ + +P V +Y+ +++S
Sbjct: 63 NLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESC 122
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
K++ V LY +M+ I+P T+ LI C + A L ++M K P+
Sbjct: 123 IKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNE 182
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
+TF ILV CK G + +L M G P+ V Y++++ +C + +E +
Sbjct: 183 FTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK 242
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI----TPNVVTYSSLIDGLC 281
M L PD+ +++ I+ LCK V DA +F M + PN +TY+ ++ G C
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY 341
K G + DA L + ++ +Y+ L L ++ A +++K+M +GI P++Y
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 401
+Y IL+DGLCK G L DA+ + + G D TY +++G C G D A +L+ +M
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 402 EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
N C PNA T I++++L++ G +AE+LLR+M +G
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 221/455 (48%), Gaps = 44/455 (9%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N + LV+ + A ++ +QM + + P ++++NIL++ C LG ++ A +++ +
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+ G PD +T Y ++ C V+ A +L EM+ P+
Sbjct: 389 RNGVCPDAVT------------------YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
T L+ +G++ EA LL +M K D T +I+VD LC G++ +A ++
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 190 VMIKGGEK-----------------------PDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
M G PD++TYS+L++G C +A+++F M
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+L PD +Y+I I+ CK + A + K M + ++ TY+SLI GL +I
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+ L++EM +G+ PN+ TY++ + LC+ V++A +L+ +M + I PNV+++ L
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 347 LDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
++ CK AQEVF+ + I G + Y++M N L G +A L+ + D G
Sbjct: 671 IEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKATELLEAVLDRG 728
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
Y+ ++ +L +K + + A +L +MI RG
Sbjct: 729 FELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 173/324 (53%), Gaps = 6/324 (1%)
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLL-NQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
P V Y L+ CI + E V L MVL I P YTF++L+ ALC V A+
Sbjct: 110 PSVYLYNLLLES-CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+ M + G KP+ T+ L+ GYC +K ++ N M + P+ Y+ +++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH---SRGLP- 302
+ DD+ + ++M E + P++VT++S I LCK G++ DA + ++M GLP
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
PN ITY+ +L CK +++A +L + ++ L ++ +Y I L GL + G+ +A+ V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
+ + KG + +Y I+++GLCK G+ +A ++ M+ NG P+AVTY +++
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 423 KGDNDKAEKLLRQMIARGLLTGLF 446
G D A+ LL++M+ L +
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAY 432
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 191/387 (49%), Gaps = 16/387 (4%)
Query: 25 TAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII 84
A SL Q+M +P+ +T NIL++ +G+I+ A +L + ++GY DT+T N I+
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 85 KI---QGKLAQP-DVVMYSTIIDSLCKDKLVNDAYNLYSE-MLAKRISPDVVTYTTLISG 139
G+L + ++V + S L N L + ++ PD++TY+TL++G
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNG 533
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
C G+ EA L +M+ + + PD ++I + CK+GK+ A VL M K G
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
+ TY+SL+ G + N++ + + + M ++P++ +Y+ I LC+ + V+DA NL
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS-----RGLPPNVITYSSLLDA 314
+M +NI PNV ++ LI+ CK A E+ S GL YS + +
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNE 707
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
L + A L++ + +G + Y L++ LCK L+ A + ++ +GY D
Sbjct: 708 LLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKM 401
+I+GL K G EA + KM
Sbjct: 768 PAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 131/249 (52%), Gaps = 4/249 (1%)
Query: 197 KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN 256
KP V Y+ L++ V ++ M +AP +++++I LC VD A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 257 LFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 316
LF +M + PN T+ L+ G CK+G EL+N M S G+ PN + Y++++ + C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 317 KNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY----N 372
+ D++ +++KM+ +G++P++ T+ + LCK G++ DA +F D+ + Y
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 373 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKL 432
+ TY +M+ G CK GL ++A L + +N + +Y I + L + G +AE +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 433 LRQMIARGL 441
L+QM +G+
Sbjct: 349 LKQMTDKGI 357
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 142/341 (41%), Gaps = 66/341 (19%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I ++ L K +A A +L +M ++ PD +NI I+ +C G+I+SAF V
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 65 LCNIFKRGYQPDTITFNTII----------KIQG-------KLAQPDVVMYSTIIDSLCK 107
L ++ K+G T+N++I +I G K P++ Y+T I LC+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV------------------------ 143
+ V DA NL EM+ K I+P+V ++ LI FC V
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 144 ----------GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
GQL +A LL ++ + + + LV++LCK+ +++ A +L MI
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 194 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
G D ++DG + +A + M M +V + K+ +
Sbjct: 762 RGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVAN-----------KVDPN 810
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDG----LCKSGRISDAW 290
A ++ ++ H +N N DG L R+ W
Sbjct: 811 ARDIHQKKHNKNGGNNWQNILHRDDGSGIALRSLSRVKKGW 851
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 12/242 (4%)
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMING-------LCKIKMVDDALNLFKQMHTE 264
L+ N + R+ +P +S+ I ++ L + KM ++ L + +
Sbjct: 9 LLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSS 68
Query: 265 NITP-NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP---PNVITYSSLLDALCKNHH 320
+I + + S++ KS I A+ + SR P P+V Y+ LL++ K
Sbjct: 69 SIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSR-FPENKPSVYLYNLLLESCIKERR 127
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
V+ L K M GI P YT+ +L+ LC + A+E+F ++ KG + T+ I
Sbjct: 128 VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGI 187
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
++ G CK GL D+ L L++ ME G PN V Y I+ + ++G ND +EK++ +M G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 441 LL 442
L+
Sbjct: 248 LV 249
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 19/190 (10%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP I +N L + + A +L +M + + P++F+F LI +C + A
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE 685
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
V F T + I G+ +YS + + L + A L +L
Sbjct: 686 V---------------FETAVSICGQKEG----LYSLMFNELLAAGQLLKATELLEAVLD 726
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ Y L+ C +L+ A G+L++M+ + D ++D L K G KE
Sbjct: 727 RGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Query: 184 AKNVLAVMIK 193
A + M++
Sbjct: 787 ANSFADKMME 796
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 226/455 (49%), Gaps = 52/455 (11%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ F+ VK+ ATA + ++M + + P++ T+ ILI C G+I AF +
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 67 NIFKRGYQPDTITFNTII-------KIQGKLA----------QPDVVMYSTIIDSLCKDK 109
I KRG +P +T++++I ++ A PDVV+Y ++D L K
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
L+ A +ML + I +VV + +LI G+C + + EA+ + M + I PDV TF+
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC------------------ 211
++ EG+++EA + M K G +PD + Y +L+D +C
Sbjct: 536 TVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Query: 212 --------------LVNEVNKAED---IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
L+ + ++ ED FN + ++ PD+ +Y+ MI G C ++ +D+A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+F+ + PN VT + LI LCK+ + A + + M +G PN +TY L+D
Sbjct: 656 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 715
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
K+ ++ + L ++M+ +GI P++ +Y+I++DGLCK GR+ +A +F + D
Sbjct: 716 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 775
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
V Y I+I G CK G EA L M NG P+
Sbjct: 776 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 225/456 (49%), Gaps = 17/456 (3%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P+P ++ F K A L + M+ R + PDL ++ LI+ Y G +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 63 SVLCNIFKRGYQPDTITFNTIIKI---QGKLA--------------QPDVVMYSTIIDSL 105
+ +G + D + F++ I + G LA P+VV Y+ +I L
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
C+D + +A+ +Y ++L + + P +VTY++LI GFC G L+ L M+ PDV
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
+ +LVD L K+G + A M+ + +VV ++SL+DG+C +N ++A +F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M + PDV +++ ++ +++AL LF +M + P+ + Y +LID CK +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
+ +L + M + ++ + ++ L K H +++A + + P++ TY
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
++ G C RL +A+ +F+ L + + + T TI+I+ LCK+ D A+ + S M + G
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
PNAVTY ++ + D + + KL +M +G+
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 186/365 (50%), Gaps = 19/365 (5%)
Query: 56 GQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAY 115
G++T A + +RG++ ++ N ++K L D+ + A
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLK------------------GLSVDQ-IEVAS 271
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
L S +L +P+VVT+ TLI+GFC G++ A L M + I PD+ +S L+D
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
K G + + + + G K DVV +SS +D Y ++ A ++ M ++P+V
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
+Y+I+I GLC+ + +A ++ Q+ + P++VTYSSLIDG CK G + + L +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M G PP+V+ Y L+D L K + +A+ KM Q I NV + L+DG C+ R
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEI 415
+A +VF+ + I G DV T+T ++ +G +EAL L +M G P+A+ Y
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCT 571
Query: 416 IIYAL 420
+I A
Sbjct: 572 LIDAF 576
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 188/356 (52%), Gaps = 3/356 (0%)
Query: 87 QGKLAQPDVVMYSTIIDSL-CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
+G + V + ++D+L CK + V A + + ++ + +V+ ++ G V Q
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQ 266
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
++ A LL+ ++ P+V TF L++ CK G++ A ++ VM + G +PD++ YS+
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
L+DGY + +F+ + DV +S I+ K + A ++K+M +
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
I+PNVVTY+ LI GLC+ GRI +A+ + ++ RG+ P+++TYSSL+D CK ++ +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
+L + M G P+V Y +L+DGL K G + A +L + L+V + +I+G
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
C+ FDEAL + M G P+ T+ ++ +G ++A L +M GL
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 126/291 (43%), Gaps = 37/291 (12%)
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
NVL + DV + LM+ C V+KA +IF T++ + S M+N L
Sbjct: 134 NVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVT-YSSLIDGLCKSGRISDAWELVNEMHSRGL--- 301
VD + F ++ I P+ V+ + ++D L G ++ A + + RG
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG 251
Query: 302 -------------------------------PPNVITYSSLLDALCKNHHVDNAISLIKK 330
PNV+T+ +L++ CK +D A L K
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
M+ +GI P++ Y+ L+DG K G L ++F L KG LDV ++ I+ K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
A + +M G +PN VTY I+I L Q G +A + Q++ RG+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 220/440 (50%), Gaps = 18/440 (4%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P + +N L K K A L +M RR++P L T+N LI+ YC G +
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
F V + +P ITFNT++K L K +V DA N+ EM
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLK------------------GLFKAGMVEDAENVLKEM 310
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
PD T++ L G+ + + A+G+ V + + YT SIL++ALCKEGK+
Sbjct: 311 KDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKI 370
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
++A+ +L + G P+ V Y++++DGYC ++ A M + + PD +Y+ +
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
I C++ +++A +M + ++P+V TY+ LI G + ++++ EM G
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE 361
PNV++Y +L++ LCK + A + + M+ +G+ P V Y +L+DG C G+++DA
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 362 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
+++L KG L++ TY +I+GL G EA L+ ++ G P+ TY +I
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 422 QKGDNDKAEKLLRQMIARGL 441
G+ + L +M G+
Sbjct: 611 FAGNVQRCIALYEEMKRSGI 630
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 229/482 (47%), Gaps = 52/482 (10%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPD 76
L ++K + A L + + P + +L++ Q +V NI + ++P
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 77 TITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVNDAYNLYS 119
+ I+ KL+ P V +Y+ +ID LCK K +NDA L+
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 120 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG 179
EMLA+R+ P ++TY TLI G+C G +++ + +M I P + TF+ L+ L K G
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
V++A+NVL M G PD T+S L DGY + A ++ T + + + S
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS---------------- 283
I++N LCK ++ A + + + + PN V Y+++IDG C+
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 284 -------------------GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
G + +A + VN+M +G+ P+V TY+ L+ + + D
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
++K+M+ G +PNV +Y L++ LCKG +L +AQ V +D+ +G + VR Y ++I+G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
C G ++A +M G N VTY +I L G +AE LL ++ +GL
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 445 LF 446
+F
Sbjct: 599 VF 600
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 198/388 (51%), Gaps = 21/388 (5%)
Query: 31 QQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKL 90
+ M+ + + PD +N LI +C LG++ +A + + +G P T+N +I G+
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 91 AQ-----------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTY 133
+ P+VV Y T+I+ LCK + +A + +M + +SP V Y
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
LI G C G++++A +M+ K I ++ T++ L+D L GK+ EA+++L + +
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 194 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
G KPDV TY+SL+ GY V + ++ M R + P +++Y ++I+ LC + ++
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIEL 651
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
LF +M ++ P+++ Y+ ++ G + A+ L +M + + + TY+SL+
Sbjct: 652 TERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
K + SLI +M + + P TY I++ G C+ A ++++ KG+ L
Sbjct: 709 GQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLL 768
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKM 401
DV +++GL ++ EA ++S+M
Sbjct: 769 DVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 207/421 (49%), Gaps = 21/421 (4%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII------------- 84
++P+ +N +I+ YC G + A + + K+G +PD + +N +I
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 85 ----KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF 140
K++ K P V Y+ +I + + +++ EM P+VV+Y TLI+
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
C +L EA + M + ++P V +++L+D C +GK+++A M+K G + ++
Sbjct: 505 CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
VTY++L+DG + ++++AED+ ++R L PDV +Y+ +I+G V + L+++
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
M I P + TY LI LC I L EM L P+++ Y+ +L +
Sbjct: 625 MKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGD 680
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
++ A +L K+M + I + TY L+ G K G+L + + + ++ + + TY I
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
++ G C+ + A +M++ G + ++ L ++ + +AE ++ +M R
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRM 800
Query: 441 L 441
L
Sbjct: 801 L 801
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 151/279 (54%), Gaps = 2/279 (0%)
Query: 166 YTFS-ILVDALCKEGK-VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
+ FS +L+ L E K + EA ++ + G P + + L+D + ++F
Sbjct: 108 HDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVF 167
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
+ + P Y I K+ V L LF +M + I P+V Y+ LIDGLCK
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG 227
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
R++DA +L +EM +R L P++ITY++L+D CK + + + + ++MK I P++ T+
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
LL GL K G ++DA+ V +++ G+ D T++I+ +G + + AL + D
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+G NA T I++ AL ++G +KAE++L + +A+GL+
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 154/346 (44%), Gaps = 48/346 (13%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + +N + + + ++M+ MP++ ++ LINC C ++ A
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 64 VLCNIFKRGYQPDTITFNTIIK---IQGKLA--------------QPDVVMYSTIIDSLC 106
V ++ RG P +N +I +GK+ + ++V Y+T+ID L
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+++A +L E+ K + PDV TY +LISG+ G ++ + L +M I P +
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635
Query: 167 TFSILVDALCKEG-------------------------------KVKEAKNVLAVMIKGG 195
T+ +L+ KEG +++A N+ MI+
Sbjct: 636 TYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
D TY+SL+ G V ++ + + + M E+ P+ +Y+I++ G C++K A
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
+++M + +V + L+ GL + R +A +++EM+ R L
Sbjct: 756 VWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 110/210 (52%)
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
SY ++ L + KM+ +A +LF + E I P+ + + L+D L K+ + + +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
P+ Y + A K V + L +MKH I P+V+ Y +L+DGLCKG R+
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
DA+++F ++L + + TY +I+G CK G +++ + +M+ + P+ +T+ +
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 417 IYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
+ LF+ G + AE +L++M G + F
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 221/437 (50%), Gaps = 20/437 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ N V+ A+ ++M ++P++ T+N +I YC L ++ A +
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L ++ +G PD ++ Y TI+ LCK+K + + +L +M +
Sbjct: 335 LEDMHSKGCLPDKVS------------------YYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Query: 125 R-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ PD VTY TLI EA+ L K D +S +V ALCKEG++ E
Sbjct: 377 HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSE 436
Query: 184 AKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
AK+++ M+ KG PDVVTY+++++G+C + EV+KA+ + M P+ SY+ ++
Sbjct: 437 AKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 496
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
NG+C+ +A + +PN +TYS ++ GL + G++S+A ++V EM +G
Sbjct: 497 NGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 556
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P + + LL +LC++ A +++ ++G NV +T ++ G C+ L A V
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 616
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
D+ + + DV TYT +++ L K G EA LM KM G P VTY +I+ Q
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Query: 423 KGDNDKAEKLLRQMIAR 439
G D +L +MI+R
Sbjct: 677 MGKVDDLVAILEKMISR 693
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 215/417 (51%), Gaps = 19/417 (4%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI---QGKLAQ-------- 92
F+ ++ Y GQ+ A VL + + G +P+ + NT I + +L +
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 93 ------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
P+VV Y+ +I C V +A L +M +K PD V+Y T++ C ++
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 147 KEAVGLLNQMVLK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
E L+ +M + + PD T++ L+ L K EA L + G + D + YS+
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 206 LMDGYCLVNEVNKAEDIFNTM-TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
++ C +++A+D+ N M ++ PDV +Y+ ++NG C++ VD A L + MHT
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
PN V+Y++L++G+C++G+ +A E++N PN ITYS ++ L + + A
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
++++M +G P +LL LC+ GR +A++ ++ L KG ++V +T +I+G
Sbjct: 544 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
C++ D AL+++ M + TY ++ L +KG +A +L+++M+ +G+
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 222/458 (48%), Gaps = 21/458 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRR-VMPDLFTFNILINCYCHLGQITSAFS 63
P + + L K K L ++M ++PD T+N LI+ A
Sbjct: 345 PDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALW 404
Query: 64 VLCNIFKRGYQPDTITFNTIIKI---QGKLAQ---------------PDVVMYSTIIDSL 105
L + ++G++ D + ++ I+ +G++++ PDVV Y+ +++
Sbjct: 405 FLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
C+ V+ A L M P+ V+YT L++G C G+ EA ++N +P+
Sbjct: 465 CRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNS 524
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
T+S+++ L +EGK+ EA +V+ M+ G P V + L+ C ++A
Sbjct: 525 ITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
A +V +++ +I+G C+ +D AL++ M+ N +V TY++L+D L K GR
Sbjct: 585 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGR 644
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
I++A EL+ +M +G+ P +TY +++ C+ VD+ +++++KM + +Y I
Sbjct: 645 IAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVI 704
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
+ LC G+L++A + +L D +T ++ G K G+ A + +M +
Sbjct: 705 --EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRN 762
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
P+ E + L KG D+A+KL+ +++ RG ++
Sbjct: 763 LIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHIS 800
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 192/353 (54%), Gaps = 2/353 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D ++Y ++++ L K KL + + M + I ++ ++ + GQL++A+ +L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
M + P++ + +D + ++++A L M G P+VVTY+ ++ GYC +
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN-ITPNVVT 272
+ V +A ++ M PD SY ++ LCK K + + +L K+M E+ + P+ VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y++LI L K +A + + +G + + YS+++ ALCK + A LI +M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 333 HQGILP-NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+G P +V TYT +++G C+ G + A+++ Q + G+ + +YT ++NG+C+ G
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
EA +M+ E++ +PN++TY +I++ L ++G +A ++R+M+ +G G
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 558
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 20/284 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP I ++ L + + A + ++M + P N+L+ C G+ A
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 64 VLCNIFKRGYQPDTITFNTII-------KIQGKLA----------QPDVVMYSTIIDSLC 106
+ +G + + F T+I ++ L+ DV Y+T++D+L
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K + +A L +ML K I P VTY T+I +C +G++ + V +L +M+ + +Y
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY 700
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
+ +++ LC GK++EA +L +++ + D T +LM+GY A + M
Sbjct: 701 --NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRM 758
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNL-FKQMHTENITPN 269
L PDV+ + L VD+A L + + +I+P
Sbjct: 759 FNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ 802
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 224/465 (48%), Gaps = 21/465 (4%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M+ SP LV+ + + + Q M R ++PD+ + +L C G +
Sbjct: 158 MKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSK 217
Query: 61 AFSVLCNIFKRGYQPDTITFNTII-------------------KIQGKLAQPDVVMYSTI 101
+L + G +P+ + I K G L P++ YS +
Sbjct: 218 KEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVL--PNLYTYSAM 275
Query: 102 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI 161
ID CK V AY LY E+L + P+VV + TL+ GFC +L A L MV +
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 221
+P++Y ++ L+ CK G + EA +L+ M PDV TY+ L++G C+ ++V +A
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 222 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
+F M + P +Y+ +I+G CK ++ AL+L +M + PN++T+S+LIDG C
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY 341
I A L EM +G+ P+V+TY++L+DA K ++ A+ L M GI PN +
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 401
T+ L+DG K GRL A + +Q+ + + +T +I GLC++G A S M
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Query: 402 EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
G TP+ +Y ++ Q+ L MI G+L L
Sbjct: 576 RSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 210/412 (50%), Gaps = 18/412 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + + L + A + + M V+P+L+T++ +I+ YC G + A+
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG- 290
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
++K + + P+VV++ T++D CK + + A +L+ M+
Sbjct: 291 ---LYKEILVAELL--------------PNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ P++ Y LI G C G + EAVGLL++M +++PDV+T++IL++ LC E +V EA
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ M P TY+SL+ GYC + +A D+ + MT + P++ ++S +I+G
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
C ++ + A+ L+ +M + I P+VVTY++LID K + +A L ++M G+ PN
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
T++ L+D K + AI ++ Q N +T L++GLC+ G + A F
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
D+ G D+ +Y M+ G ++ + + L M G PN + +++
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLL 625
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 191/377 (50%), Gaps = 8/377 (2%)
Query: 69 FKRGYQPDTIT---FNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR 125
KR +P ++ FN + IQ + + ++S +I + L +A + EM +
Sbjct: 105 LKRHSEPSNMSHRLFNALEDIQS--PKFSIGVFSLLIMEFLEMGLFEEALWVSREM---K 159
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
SPD ++++G + M+ + + PDV+ + +L K+G + +
Sbjct: 160 CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKE 219
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
+L M G KP+V Y+ + C N++ +AE +F M + + P++ +YS MI+G
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
CK V A L+K++ + PNVV + +L+DG CK+ + A L M G+ PN+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
Y+ L+ CK+ ++ A+ L+ +M+ + P+V+TYTIL++GLC ++ +A +FQ
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
+ + TY +I+G CK+ ++AL L S+M +G PN +T+ +I D
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 426 NDKAEKLLRQMIARGLL 442
A L +M +G++
Sbjct: 460 IKAAMGLYFEMTIKGIV 476
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 182/372 (48%), Gaps = 17/372 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + ++ KT + A L +++ ++P++ F L++ +C ++ +A S+
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLA-----------------QPDVVMYSTIIDSLCK 107
++ K G P+ +N +I K PDV Y+ +I+ LC
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ V +A L+ +M +RI P TY +LI G+C +++A+ L ++M + P++ T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
FS L+D C +K A + M G PDVVTY++L+D + + +A +++ M
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ P+ +++ +++G K + A++ +++ + + N V ++ LI+GLC++G I
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A ++M S G+ P++ +Y S+L + + + + L M GILPN+ +L
Sbjct: 567 RASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLA 626
Query: 348 DGLCKGGRLKDA 359
G +K A
Sbjct: 627 RFYQANGYVKSA 638
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 168/340 (49%), Gaps = 17/340 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ F K + TA SL M V P+L+ +N LI+ +C G + A +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQ--------------PDVVMYSTIIDSLCK 107
L + PD T+ +I I+ ++A+ P Y+++I CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ + A +L SEM A + P+++T++TLI G+C V +K A+GL +M +K I PDV T
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+DA KE +KEA + + M++ G P+ T++ L+DG+ ++ A D +
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ + ++ +I GLC+ + A F M + ITP++ +Y S++ G + RI+
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRIT 601
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 327
D L +M G+ PN++ L N +V +A L
Sbjct: 602 DTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFL 641
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 120/235 (51%)
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
E+ E+ M+ +PD ++ ++NGL + + D ++ M + + P+V Y
Sbjct: 144 EMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYF 203
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
L K G S +L++EM S G+ PNV Y+ + LC+++ ++ A + + MK
Sbjct: 204 VLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKH 263
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
G+LPN+YTY+ ++DG CK G ++ A +++++L+ +V + +++G CK A
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
+L M G PN Y +I+ + G+ +A LL +M + L +F T
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 247/491 (50%), Gaps = 49/491 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P FN + + K A + M PD+ ++N LI+ +C G I SA
Sbjct: 53 TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 64 VLCNI-FKRGY--QPDTITFNTI----------------IKIQGKLAQPDVVMYSTIIDS 104
VL ++ G+ +PD ++FN++ + + K P+VV YST ID+
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDT 172
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
CK + A + M +SP+VVT+T LI G+C G L+ AV L +M ++ +
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V T++ L+D CK+G+++ A+ + + M++ +P+ + Y++++DG+ + + A
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M + D+ +Y ++I+GLC + +A + + M ++ P++V ++++++ KSG
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI------------------- 325
R+ A + +++ RG P+V+ S+++D + KN + AI
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDA 412
Query: 326 -----------SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
L K+ G++P+ + YT + GLCK G L DA ++ ++ +G LD
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
+ YT +I GL GL EA + +M ++G +P++ ++++I A ++G+ A LL
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 435 QMIARGLLTGL 445
M RGL+T +
Sbjct: 533 DMQRRGLVTAV 543
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 246/452 (54%), Gaps = 28/452 (6%)
Query: 36 RRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII----------- 84
R P +FN +++ C LGQ+ A ++ ++ + G +PD I++N++I
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 85 ---------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
G + +PD+V ++++ + K K++++ + +Y ++ K SP+VVTY+T
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYST 168
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
I FC G+L+ A+ + M +++P+V TF+ L+D CK G ++ A ++ M +
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
+VVTY++L+DG+C E+ +AE++++ M + P+ Y+ +I+G + D+A+
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
+M + + ++ Y +I GLC +G++ +A E+V +M L P+++ ++++++A
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
K+ + A+++ K+ +G P+V + ++DG+ K G+L +A F I+ N DV
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF---CIEKAN-DV 404
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
YT++I+ LCK+G F E L SK+ + G P+ Y I L ++G+ A KL +
Sbjct: 405 -MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463
Query: 436 MIARGLLTGLFYATEFEAVEELSAPGLRSPVR 467
M+ GLL L T + L++ GL R
Sbjct: 464 MVQEGLLLDLLAYTTL--IYGLASKGLMVEAR 493
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 223/500 (44%), Gaps = 93/500 (18%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P+P ++ F K A L + M+ R + PDL ++ LI+ Y G +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 63 SVLCNIFKRGYQPDTITFNTIIKI---QGKLA--------------QPDVVMYSTIIDSL 105
+ +G + D + F++ I + G LA P+VV Y+ +I L
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
C+D + +A+ +Y ++L + + P +VTY++LI GFC G L+ L M+ PDV
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 166 YTFSILVDALCKEG-----------------------------------KVKEAKNVLAV 190
+ +LVD L K+G + EA V +
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 191 MIKGGEKPDVVTYSSLM------DGYC--------------------------------L 212
M G KPDV T++++M D +C L
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 213 VNEVNKAED---IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+ + ++ ED FN + ++ PD+ +Y+ MI G C ++ +D+A +F+ + PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
VT + LI LCK+ + A + + M +G PN +TY L+D K+ ++ + L +
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
+M+ +GI P++ +Y+I++DGLCK GR+ +A +F + DV Y I+I G CK G
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
Query: 390 LFDEALALMSKMEDNGCTPN 409
EA L M NG P+
Sbjct: 762 RLVEAALLYEHMLRNGVKPD 781
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 25/388 (6%)
Query: 56 GQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAY 115
G++T A + +RG++ ++ N ++K L D+ + A
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLK------------------GLSVDQ-IEVAS 271
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
L S +L +P+VVT+ TLI+GFC G++ A L M + I PD+ +S L+D
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
K G + + + + G K DVV +SS +D Y ++ A ++ M ++P+V
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
+Y+I+I GLC+ + +A ++ Q+ + P++VTYSSLIDG CK G + + L +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M G PP+V+ Y L+D L K + +A+ KM Q I NV + L+DG C+ R
Sbjct: 452 MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYT------IMINGLCKDGLFDEALALMSKMEDNGCTPN 409
+A +VF+ + I G DV T+T IM + CK L L M+ N + +
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMI 437
++I+ LF+ + A K +I
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 147/262 (56%)
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
+++ A +L++++ G P+VVT+ +L++G+C E+++A D+F M + + PD+ +YS
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+I+G K M+ LF Q + + +VV +SS ID KSG ++ A + M +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
G+ PNV+TY+ L+ LC++ + A + ++ +G+ P++ TY+ L+DG CK G L+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 360 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
+++D++ GY DV Y ++++GL K GL A+ KM N V + +I
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 420 LFQKGDNDKAEKLLRQMIARGL 441
+ D+A K+ R M G+
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGI 527
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 235/469 (50%), Gaps = 34/469 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + N L A A+ L+ M+ V PD T+NIL + LG I+ A+ V
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPD------------------VVMYSTIIDSLC 106
+ ++ +G PD IT+ ++ Q +L D ++ S ++ LC
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K +++A +L+++M A +SPD+V Y+ +I G C +G+ A+ L ++M K I P+
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T L+ LC++G + EA+++L +I GE D+V Y+ ++DGY + +A ++F +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ P V +++ +I G CK + + +A + + + P+VV+Y++L+D G
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK------------MKHQ 334
EL EM + G+PP +TYS + LC+ +N ++++ M+ +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR--TYTIMINGLCKDGLFD 392
GI P+ TY ++ LC+ L A VF +++ K NLD TY I+I+ LC G
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIM-KSRNLDASSATYNILIDSLCVYGYIR 672
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+A + + +++ + + Y +I A KGD + A KL Q++ RG
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 222/424 (52%), Gaps = 11/424 (2%)
Query: 29 LSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII---- 84
L ++ FR+ +++L+ L + + +L + + T ++N+++
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFR 170
Query: 85 ------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
+ ++ + YST++D LC+ + + DA K I P VV++ +++S
Sbjct: 171 ETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMS 230
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
G+C +G + A ++ + P VY+ +IL++ LC G + EA + + M K G +P
Sbjct: 231 GYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP 290
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
D VTY+ L G+ L+ ++ A ++ M L+PDV +Y+I++ G C++ +D L L
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 259 KQMHTENITPN-VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
K M + N ++ S ++ GLCK+GRI +A L N+M + GL P+++ YS ++ LCK
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
D A+ L +M + ILPN T+ LL GLC+ G L +A+ + L+ G LD+
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
Y I+I+G K G +EAL L + + G TP+ T+ +IY + + +A K+L +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 438 ARGL 441
GL
Sbjct: 531 LYGL 534
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 215/430 (50%), Gaps = 19/430 (4%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPD 76
L + + A+ + +++ + P + +FN +++ YC LG + A S C + K G P
Sbjct: 197 LCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 77 TITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTL 136
+ N +I + LC + +A L S+M + PD VTY L
Sbjct: 257 VYSHNILI------------------NGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 137 ISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGG 195
GF ++G + A ++ M+ K ++PDV T++IL+ C+ G + +L M+ +G
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
E ++ S ++ G C +++A +FN M L+PD+ +YSI+I+GLCK+ D AL
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
L+ +M + I PN T+ +L+ GLC+ G + +A L++ + S G +++ Y+ ++D
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
K+ ++ A+ L K + GI P+V T+ L+ G CK + +A+++ + + G V
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
+YT +++ G L +M+ G P VTY +I L + ++ +LR+
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 436 MIARGLLTGL 445
I GL
Sbjct: 599 RIFEKCKQGL 608
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + FN KT++ A A + + + P + ++ L++ Y + G S
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 64 VLCNIFKRGYQPDTITFNTIIK--IQG-KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
+ + G P +T++ I K +G K + V+ I + CK L +
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK-CKQGL--------RD 610
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M ++ I PD +TY T+I C V L A L M ++++ T++IL+D+LC G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+++A + + + + Y++L+ +C+ + A +F+ + ++ YS
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730
Query: 241 MINGLCKIKMVD 252
+IN LC+ +++
Sbjct: 731 VINRLCRRHLMN 742
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 235/469 (50%), Gaps = 34/469 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + N L A A+ L+ M+ V PD T+NIL + LG I+ A+ V
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPD------------------VVMYSTIIDSLC 106
+ ++ +G PD IT+ ++ Q +L D ++ S ++ LC
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K +++A +L+++M A +SPD+V Y+ +I G C +G+ A+ L ++M K I P+
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T L+ LC++G + EA+++L +I GE D+V Y+ ++DGY + +A ++F +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ P V +++ +I G CK + + +A + + + P+VV+Y++L+D G
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK------------MKHQ 334
EL EM + G+PP +TYS + LC+ +N ++++ M+ +
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESE 614
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR--TYTIMINGLCKDGLFD 392
GI P+ TY ++ LC+ L A VF +++ K NLD TY I+I+ LC G
Sbjct: 615 GIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIM-KSRNLDASSATYNILIDSLCVYGYIR 672
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+A + + +++ + + Y +I A KGD + A KL Q++ RG
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 222/424 (52%), Gaps = 11/424 (2%)
Query: 29 LSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII---- 84
L ++ FR+ +++L+ L + + +L + + T ++N+++
Sbjct: 111 LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFR 170
Query: 85 ------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
+ ++ + YST++D LC+ + + DA K I P VV++ +++S
Sbjct: 171 ETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMS 230
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
G+C +G + A ++ + P VY+ +IL++ LC G + EA + + M K G +P
Sbjct: 231 GYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP 290
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
D VTY+ L G+ L+ ++ A ++ M L+PDV +Y+I++ G C++ +D L L
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 259 KQMHTENITPN-VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
K M + N ++ S ++ GLCK+GRI +A L N+M + GL P+++ YS ++ LCK
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
D A+ L +M + ILPN T+ LL GLC+ G L +A+ + L+ G LD+
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
Y I+I+G K G +EAL L + + G TP+ T+ +IY + + +A K+L +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 438 ARGL 441
GL
Sbjct: 531 LYGL 534
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 215/430 (50%), Gaps = 19/430 (4%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPD 76
L + + A+ + +++ + P + +FN +++ YC LG + A S C + K G P
Sbjct: 197 LCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 77 TITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTL 136
+ N +I + LC + +A L S+M + PD VTY L
Sbjct: 257 VYSHNILI------------------NGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 137 ISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGG 195
GF ++G + A ++ M+ K ++PDV T++IL+ C+ G + +L M+ +G
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
E ++ S ++ G C +++A +FN M L+PD+ +YSI+I+GLCK+ D AL
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
L+ +M + I PN T+ +L+ GLC+ G + +A L++ + S G +++ Y+ ++D
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
K+ ++ A+ L K + GI P+V T+ L+ G CK + +A+++ + + G V
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
+YT +++ G L +M+ G P VTY +I L + ++ +LR+
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 436 MIARGLLTGL 445
I GL
Sbjct: 599 RIFEKCKQGL 608
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + FN KT++ A A + + + P + ++ L++ Y + G S
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 64 VLCNIFKRGYQPDTITFNTIIK--IQG-KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
+ + G P +T++ I K +G K + V+ I + CK L +
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK-CKQGL--------RD 610
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M ++ I PD +TY T+I C V L A L M ++++ T++IL+D+LC G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+++A + + + + Y++L+ +C+ + A +F+ + ++ YS
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730
Query: 241 MINGLCKIKMVD 252
+IN LC+ +++
Sbjct: 731 VINRLCRRHLMN 742
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 229/453 (50%), Gaps = 22/453 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + K+ L +M R ++ +T+ ++ C G + A+++
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 65 LCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLCK 107
+ + G +P+ + + T+IK ++ + PD+ Y+++I L K
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K +++A + EM+ + P+ TY ISG+ + A + +M + P+
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ L++ CK+GKV EA + M+ G D TY+ LM+G ++V+ AE+IF M
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+APDV SY ++ING K+ + A ++F +M E +TPNV+ Y+ L+ G C+SG I
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A EL++EM +GL PN +TY +++D CK+ + A L +MK +G++P+ + YT L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG---LFDEAL-ALMSKMED 403
DG C+ ++ A +F KG + +IN + K G L E L LM D
Sbjct: 740 DGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
PN VTY I+I L ++G+ + A++L QM
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 227/433 (52%), Gaps = 17/433 (3%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+ L + M + ++P +T+++LI+ C + ++ A S+L + G D T++ +I
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 86 --IQGKLAQP------DVV---------MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
++G+ A ++V MY I + K+ ++ A L+ M+A + P
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
Y +LI G+C +++ LL +M ++I YT+ +V +C G + A N++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
MI G +P+VV Y++L+ + + A + M +APD+ Y+ +I GL K
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 249 KMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 308
K +D+A + +M + PN TY + I G ++ + A + V EM G+ PN +
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
+ L++ CK V A S + M QGIL + TYT+L++GL K ++ DA+E+F+++
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
KG DV +Y ++ING K G +A ++ +M + G TPN + Y +++ + G+ +K
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 429 AEKLLRQMIARGL 441
A++LL +M +GL
Sbjct: 681 AKELLDEMSVKGL 693
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 231/442 (52%), Gaps = 28/442 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + F + ++ +A+A ++M V+P+ LIN YC G++ A S
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
++ +G D T Y+ +++ L K+ V+DA ++ EM K
Sbjct: 580 YRSMVDQGILGDAKT------------------YTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
I+PDV +Y LI+GF +G +++A + ++MV + + P+V +++L+ C+ G++++A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
K +L M G P+ VTY +++DGYC ++ +A +F+ M L PD Y+ +++G
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM----HSRG 300
C++ V+ A+ +F + + + +++LI+ + K G+ E++N + R
Sbjct: 742 CCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
PN +TY+ ++D LCK +++ A L +M++ ++P V TYT LL+G K GR +
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM-----EDNGCTPNAVTYEI 415
VF + + G D Y+++IN K+G+ +AL L+ +M D+GC + T
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 416 IIYALFQKGDNDKAEKLLRQMI 437
++ + G+ + AEK++ M+
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMV 942
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 205/417 (49%), Gaps = 19/417 (4%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK---IQGKL---- 90
++P + LI YC + + +L + KR T+ T++K G L
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 91 ----------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF 140
+P+VV+Y+T+I + ++ DA + EM + I+PD+ Y +LI G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
++ EA L +MV + P+ +T+ + + + A + M + G P+
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
V + L++ YC +V +A + +M + D ++Y++++NGL K VDDA +F++
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
M + I P+V +Y LI+G K G + A + +EM GL PNVI Y+ LL C++
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
++ A L+ +M +G+ PN TY ++DG CK G L +A +F ++ +KG D YT
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDND-KAEKLLRQM 436
+++G C+ + A+ + GC + + +I +F+ G + K E L R M
Sbjct: 738 LVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 196/445 (44%), Gaps = 91/445 (20%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK----- 147
P + ++D+L + ++ +++Y M+ + + DV TY LI C G ++
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 148 ----------------EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
A+ L M+ K + P YT+ +L+D LCK ++++AK++L M
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 192 IKGGEKPDVVTYSSLMDGYC----------LVNE-------------------------V 216
G D TYS L+DG LV+E +
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
KA+ +F+ M L P Q+Y+ +I G C+ K V L +M NI + TY ++
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
+ G+C SG + A+ +V EM + G PNV+ Y++L+ +N +A+ ++K+MK QGI
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY------------------ 378
P+++ Y L+ GL K R+ +A+ +++ G + TY
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 379 -----------------TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
T +IN CK G EA + M D G +A TY +++ LF
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 422 QKGDNDKAEKLLRQMIARGLLTGLF 446
+ D AE++ R+M +G+ +F
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVF 628
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 211/533 (39%), Gaps = 134/533 (25%)
Query: 27 ISLSQQMDFRRVMPD-LFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
+S +D ++V L +F+ L C+ G A SV+ + +R +
Sbjct: 81 LSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW------------ 128
Query: 86 IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
P ++S+I+ C + V S D V + L G+ G
Sbjct: 129 -------PVAEVWSSIVR--CSQEFVGK-------------SDDGVLFGILFDGYIAKGY 166
Query: 146 LKEAVGLLNQ-----------------------------------MVLKSINPDVYTFSI 170
++EAV + + MV +++ DV T+ +
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226
Query: 171 LVDALCKEGKVKEAKNVL---------------------AVMIKGGEKPDVVTYSSLMDG 209
L+ A C+ G V+ K+VL MI G P TY L+DG
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK-----------MVDDALN-- 256
C + + A+ + M + ++ D +YS++I+GL K + MV +N
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 257 ----------------------LFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
LF M + P Y+SLI+G C+ + +EL+
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
EM R + + TY +++ +C + +D A +++K+M G PNV YT L+ +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 355 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYE 414
R DA V +++ +G D+ Y +I GL K DEA + + +M +NG PNA TY
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 415 IIIYALFQKGDNDKAEKLLRQMIARGLL------TGLF--YATEFEAVEELSA 459
I + + A+K +++M G+L TGL Y + + +E SA
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 161/357 (45%), Gaps = 28/357 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + + K + A S+ +M + P++ +N+L+ +C G+I A
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+L + +G P+ +T Y TIID CK + +A+ L+ EM
Sbjct: 684 LLDEMSVKGLHPNAVT------------------YCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K + PD YTTL+ G C + ++ A+ + K F+ L++ + K GK +
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTEL 784
Query: 184 AKNVLAVMIKGG----EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
VL ++ G KP+ VTY+ ++D C + A+++F+ M L P V +Y+
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
++NG K+ + +F + I P+ + YS +I+ K G + A LV++M ++
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 300 -----GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
G ++ T +LL K ++ A +++ M +P+ T L++ C
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 226/464 (48%), Gaps = 49/464 (10%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN--IFKRGYQ 74
+V + Y A + +D M D F C + S +V+ N ++ RG +
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEF------RCKRSVKSFNSVLNVIINEGLYHRGLE 169
Query: 75 PDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYT 134
N+ + + P+ + ++ +I +LCK + V+ A ++ M ++ PD TY
Sbjct: 170 FYDYVVNSNMNMN---ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC 226
Query: 135 TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 194
TL+ G C ++ EAV LL++M + +P +++L+D LCK+G + ++ M
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD- 253
G P+ VTY++L+ G CL +++KA + M + P+ +Y +INGL K + D
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 254 ----------------------------------ALNLFKQMHTENITPNVVTYSSLIDG 279
A++L+++M + PN+V YS L+DG
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
LC+ G+ ++A E++N M + G PN TYSSL+ K + A+ + K+M G N
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
+ Y++L+DGLC GR+K+A V+ +L G D Y+ +I GLC G D AL L
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 400 KM---EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+M E+ P+ VTY I++ L + D +A LL M+ RG
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 214/441 (48%), Gaps = 57/441 (12%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
+ P+ +FN++I C L + A V + +R PD T
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT------------------ 224
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y T++D LCK++ +++A L EM ++ SP V Y LI G C G L L++ M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
LK P+ T++ L+ LC +GK+ +A ++L M+ P+ VTY +L++G
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A + ++M + YS++I+GL K ++A++L+++M + PN+V YS L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
DGLC+ G+ ++A E++N M + G PN TYSSL+ K + A+ + K+M G
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLL--------------IKGY------------ 371
N + Y++L+DGLC GR+K+A V+ +L IKG
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 372 ------------NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
DV TY I+++GLC A+ L++ M D GC P+ +T +
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 420 LFQKGDN-DKAEKLLRQMIAR 439
L +K ++ DK L +++ R
Sbjct: 585 LSEKSNSCDKGRSFLEELVVR 605
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 190/372 (51%), Gaps = 20/372 (5%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPD 76
L K + A+ L +M P +N+LI+ C G +T ++ N+F +G P+
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 77 TITFNTIIK---IQGKLAQ--------------PDVVMYSTIIDSLCKDKLVNDAYNLYS 119
+T+NT+I ++GKL + P+ V Y T+I+ L K + DA L S
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Query: 120 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG 179
M + + Y+ LISG G+ +EA+ L +M K P++ +S+LVD LC+EG
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
K EAK +L MI G P+ TYSSLM G+ +A ++ M + + + YS
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
++I+GLC + V +A+ ++ +M T I P+ V YSS+I GLC G + A +L +EM +
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 300 GLP---PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
P P+V+TY+ LLD LC + A+ L+ M +G P+V T L+ L +
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS 591
Query: 357 KDAQEVFQDLLI 368
D F + L+
Sbjct: 592 CDKGRSFLEELV 603
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 206/420 (49%), Gaps = 22/420 (5%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPD--VVMYSTI 101
T + +I Y + G S +L I +F + + GK PD V ++ +
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 102 IDSL-CKD--KLVNDAYN-LYSEMLAKR----------------ISPDVVTYTTLISGFC 141
+D CK K N N + +E L R ISP+ +++ +I C
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 142 IVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
+ + A+ + M + PD YT+ L+D LCKE ++ EA +L M G P V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
Y+ L+DG C ++ + + + M P+ +Y+ +I+GLC +D A++L ++M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+ PN VTY +LI+GL K R +DA L++ M RG N YS L+ L K
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
+ A+SL +KM +G PN+ Y++L+DGLC+ G+ +A+E+ ++ G + TY+ +
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ G K GL +EA+ + +M+ GC+ N Y ++I L G +A + +M+ G+
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 154/249 (61%)
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
P+ ++++ ++ C + V++A ++F M + PD +Y +++GLCK + +D+A+ L
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
+M +E +P+ V Y+ LIDGLCK G ++ +LV+ M +G PN +TY++L+ LC
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
+D A+SL+++M +PN TY L++GL K R DA + + +GY+L+
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
Y+++I+GL K+G +EA++L KM + GC PN V Y +++ L ++G ++A+++L +MI
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 438 ARGLLTGLF 446
A G L +
Sbjct: 425 ASGCLPNAY 433
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 177/362 (48%), Gaps = 41/362 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N L A+SL ++M + +P+ T+ LIN + T A +
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
L ++ +RGY + ++ +I K+ K +P++V+YS ++D LC+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ N+A + + M+A P+ TY++L+ GF G +EAV + +M + + +
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+S+L+D LC G+VKEA V + M+ G KPD V YSS++ G C + ++ A +++ M
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 228 RME---LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL---- 280
E PDV +Y+I+++GLC K + A++L M P+V+T ++ ++ L
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 281 --CKSG---------------RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
C G R+S A +V M + L P T++ ++ +CK ++
Sbjct: 590 NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINA 649
Query: 324 AI 325
AI
Sbjct: 650 AI 651
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
++ + L K A+SL ++M + P++ +++L++ C G+ A +L +
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 70 KRGYQPDTITFNTIIK--IQGKLAQPDVVM---------------YSTIIDSLCKDKLVN 112
G P+ T+++++K + L + V + YS +ID LC V
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS---INPDVYTFS 169
+A ++S+ML I PD V Y+++I G C +G + A+ L ++M+ + PDV T++
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD-----------GYCLVNE--- 215
IL+D LC + + A ++L M+ G PDV+T ++ ++ G + E
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Query: 216 -------VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN 256
V+ A I M LAP ++++++ +CK K ++ A++
Sbjct: 605 RLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 199/398 (50%), Gaps = 21/398 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I N L K + A L ++M P+ ++N LI C + + A +
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 65 LCNIFKRGYQPDTITFNTIIKI----------QGKL-----------AQPDVVMYSTIID 103
+ K G +P+ +T N I+ KL A D+V+ + ++D
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMD 273
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
S K+ V A ++ EM K + D V Y +I G C G + A G + MV + +NP
Sbjct: 274 SCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP 333
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
DV+T++ L+ ALCKEGK EA ++ M GG PD ++Y ++ G C+ +VN+A +
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
+M + L P+V ++++I+G + AL++ M + + PNV T ++LI G K
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKG 453
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
GR+ DAW + NEM S + P+ TY+ LL A C H+ A L +M +G P++ TY
Sbjct: 454 GRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITY 513
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
T L+ GLC GRLK A+ + + G +D + I+
Sbjct: 514 TELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 212/413 (51%), Gaps = 21/413 (5%)
Query: 25 TAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII 84
A+ L ++M + V+P L T N L+N C G I A ++ + + G P+ +++NT+I
Sbjct: 139 AALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLI 198
Query: 85 K-----------------IQGKLAQPDVVMYSTIIDSLCKDKLV-NDAYNLYSEML--AK 124
K + +P+ V + I+ +LC+ ++ N+ L E+L ++
Sbjct: 199 KGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 125 RISP-DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+P D+V T L+ G + +A+ + +M K++ D +++++ LC G +
Sbjct: 259 ANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVA 318
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A + M+K G PDV TY++L+ C + ++A D+ TM +APD SY ++I
Sbjct: 319 AYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQ 378
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
GLC V+ A M ++ P V+ ++ +IDG + G S A ++N M S G+ P
Sbjct: 379 GLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP 438
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
NV T ++L+ K + +A + +M+ I P+ TY +LL C G L+ A +++
Sbjct: 439 NVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLY 498
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
++L +G D+ TYT ++ GLC G +A +L+S+++ G T + V + I+
Sbjct: 499 DEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 184/389 (47%), Gaps = 41/389 (10%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P ++ ++ +++ LCK + A L EM SP+ V+Y TLI G C V + +A+ L
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKV-KEAKNVLAVMIKGGEKP---DVVTYSSLMD 208
N M I P+ T +I+V ALC++G + K +L ++ + D+V + LMD
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMD 273
Query: 209 GYCLVN-EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
C N V +A +++ M++ + D Y+++I GLC + A M +
Sbjct: 274 S-CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD----- 322
P+V TY++LI LCK G+ +A +L M + G+ P+ I+Y ++ LC + V+
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 323 ------------------------------NAISLIKKMKHQGILPNVYTYTILLDGLCK 352
+A+S++ M G+ PNVYT L+ G K
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
GGRL DA V ++ + D TY +++ C G A L +M GC P+ +T
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMIARGL 441
Y ++ L KG KAE LL ++ A G+
Sbjct: 513 YTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 145/268 (54%), Gaps = 5/268 (1%)
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
SI+ D LC +GK+ A + MI G P ++T++ L++G C + KA+ + M
Sbjct: 126 SIMRD-LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 229 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
M +P+ SY+ +I GLC + VD AL LF M+ I PN VT + ++ LC+ G I +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 289 A----WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
E + + P +++ + L+D+ KN +V A+ + K+M + + + Y
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
+++ GLC G + A D++ +G N DV TY +I+ LCK+G FDEA L M++
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKL 432
G P+ ++Y++II L GD ++A +
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 168/331 (50%), Gaps = 39/331 (11%)
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
+++++ C+ G+L A+ L +M+ + P + T + L++ LCK G +++A ++ M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
+ G P+ V+Y++L+ G C VN V+KA +FNTM + + P+ + +I+++ LC+ ++
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 253 D---------------------------------------ALNLFKQMHTENITPNVVTY 273
+ AL ++K+M +N+ + V Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+ +I GLC SG + A+ + +M RG+ P+V TY++L+ ALCK D A L M++
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
G+ P+ +Y +++ GLC G + A E +L +V + ++I+G + G
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
AL++++ M G PN T +I+ + G
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 177/390 (45%), Gaps = 25/390 (6%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M PSP + +N L + A+ L M+ + P+ T NI+++ C G I +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 61 AFS------------------VLCNI-----FKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
V+C I FK G + ++ K D V+
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQAL--EVWKEMSQKNVPADSVV 302
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y+ II LC + AY +M+ + ++PDV TY TLIS C G+ EA L M
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
+ PD ++ +++ LC G V A L M+K P+V+ ++ ++DGY + +
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A + N M + P+V + + +I+G K + DA + +M + I P+ TY+ L+
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
C G + A++L +EM RG P++ITY+ L+ LC + A SL+ +++ GI
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLL 367
+ + IL + R +A V++ L
Sbjct: 543 IDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 39/243 (16%)
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
+S ++ LC +D AL L K+M + P ++T++ L++GLCK+G I A LV EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC------ 351
G PN ++Y++L+ LC ++VD A+ L M GI PN T I++ LC
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 352 ---------------------------------KGGRLKDAQEVFQDLLIKGYNLDVRTY 378
K G + A EV++++ K D Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
++I GLC G A M M G P+ TY +I AL ++G D+A L M
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 439 RGL 441
G+
Sbjct: 364 GGV 366
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 196/360 (54%), Gaps = 18/360 (5%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
+ PD+ T + L+N +C I A V + K G + DVV+
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGI------------------KRDVVV 50
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
+ +ID+LCK++LV A + M + ISP+VVTY++LI+G C G+L +A L++M
Sbjct: 51 DTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMD 110
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
K INP+V TFS L+DA K GK+ + +V +MI+ P+V TYSSL+ G C+ N V+
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVD 170
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+A + + M P+V +YS + NG K VDD + L M + N V+ ++LI
Sbjct: 171 EAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
G ++G+I A + M S GL PN+ +Y+ +L L N V+ A+S + M+
Sbjct: 231 KGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRND 290
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
++ TYTI++ G+CK +K+A ++F L K D + YTIMI L + G+ EA AL
Sbjct: 291 LDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 193/343 (56%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+PD+V S++++ C + DA + +M I DVV T LI C + A+
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+L +M + I+P+V T+S L+ LCK G++ +A+ L M P+V+T+S+L+D Y
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+++K + ++ M +M + P+V +YS +I GLC VD+A+ + M ++ TPNVV
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TYS+L +G KS R+ D +L+++M RG+ N ++ ++L+ + +D A+ + M
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
G++PN+ +Y I+L GL G ++ A F+ + +LD+ TYTIMI+G+CK +
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
EA L K++ P+ Y I+I L + G +A+ L R
Sbjct: 310 KEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 154/272 (56%), Gaps = 10/272 (3%)
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M+K G +PD+VT SSL++G+CL N + A + M +M + DV +I+I+ LCK ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
V AL + K+M I+PNVVTYSSLI GLCKSGR++DA ++EM S+ + PNVIT+S+
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
L+DA K + S+ K M I PNV+TY+ L+ GLC R+ +A ++ ++ KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 371 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
+V TY+ + NG K D+ + L+ M G N V+ +I FQ G D A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 431 KLLRQMIARGL----------LTGLFYATEFE 452
+ M + GL L GLF E E
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 275
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 146/282 (51%)
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
+M+ I PD+ T S LV+ C +K+A V M K G K DVV + L+D C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
V A ++ M ++P+V +YS +I GLCK + DA +M ++ I PNV+T+S
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LID K G++S + M + PNV TYSSL+ LC ++ VD AI ++ M +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
G PNV TY+ L +G K R+ D ++ D+ +G + + +I G + G D A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
L + M NG PN +Y I++ LF G+ +KA M
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 167/328 (50%), Gaps = 17/328 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ + + A+ ++ QM+ + D+ ILI+ C + A V
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLA--------------QPDVVMYSTIIDSLCK 107
L + RG P+ +T++++I G+LA P+V+ +S +ID+ K
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
++ ++Y M+ I P+V TY++LI G C+ ++ EA+ +L+ M+ K P+V T
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+S L + K +V + +L M + G + V+ ++L+ GY +++ A +F MT
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
L P+++SY+I++ GL V+ AL+ F+ M +++TY+ +I G+CK+ +
Sbjct: 251 SNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVK 310
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDAL 315
+A++L ++ + + P+ Y+ ++ L
Sbjct: 311 EAYDLFYKLKFKRVEPDFKAYTIMIAEL 338
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 154/301 (51%), Gaps = 19/301 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ ++ T L K+ A A +MD +++ P++ TF+ LI+ Y G+++ S
Sbjct: 80 SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDS 139
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
V + +I++ P+V YS++I LC V++A + M++
Sbjct: 140 V---------------YKMMIQMS---IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K +P+VVTY+TL +GF ++ + + LL+ M + + + + + L+ + GK+
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A V M G P++ +Y+ ++ G EV KA F M + D+ +Y+IMI+
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
G+CK MV +A +LF ++ + + P+ Y+ +I L ++G ++A + +N + + +
Sbjct: 302 GMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA-DALNRFYQKHVRQ 360
Query: 304 N 304
N
Sbjct: 361 N 361
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 84/152 (55%)
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
+M G+ P+++T SSL++ C ++ + +A+ + +M+ GI +V TIL+D LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 355 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYE 414
+ A EV + + +G + +V TY+ +I GLCK G +A + +M+ PN +T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 415 IIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
+I A ++G K + + + MI + +F
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 154
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M P + ++ L AI + M + P++ T++ L N + ++
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIK-------------IQGKLAQ----PDVVMYSTIID 103
+L ++ +RG +T++ NT+IK + G + P++ Y+ ++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
L + V A + + M R D++TYT +I G C +KEA L ++ K + P
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 164 DVYTFSILVDALCKEGKVKEA 184
D ++I++ L + G EA
Sbjct: 327 DFKAYTIMIAELNRAGMRTEA 347
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 186/344 (54%), Gaps = 18/344 (5%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
+++ FNIL+N +C G I+ A V I KR QP ++FNT+
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL----------------- 281
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
I+ CK +++ + L +M R PDV TY+ LI+ C ++ A GL ++M +
Sbjct: 282 -INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
+ P+ F+ L+ + G++ K M+ G +PD+V Y++L++G+C ++ A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+I + M R L PD +Y+ +I+G C+ V+ AL + K+M I + V +S+L+ G+
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
CK GR+ DA + EM G+ P+ +TY+ ++DA CK L+K+M+ G +P+V
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
TY +LL+GLCK G++K+A + +L G D TY ++ G
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 188/335 (56%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+V +++ +++ CK+ ++DA ++ E+ + + P VV++ TLI+G+C VG L E L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+QM PDV+T+S L++ALCKE K+ A + M K G P+ V +++L+ G+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
E++ ++ + M L PD+ Y+ ++NG CK + A N+ M + P+ +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
++LIDG C+ G + A E+ EM G+ + + +S+L+ +CK V +A +++M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
GI P+ TYT+++D CK G + ++ +++ G+ V TY +++NGLCK G
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
A L+ M + G P+ +TY ++ + ++ K
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 190/342 (55%)
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
++D + K + Y E+L +V + L++ FC G + +A + +++ +S
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
+ P V +F+ L++ CK G + E + M K +PDV TYS+L++ C N+++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+F+ M + L P+ ++ +I+G + +D +++M ++ + P++V Y++L++G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
CK+G + A +V+ M RGL P+ ITY++L+D C+ V+ A+ + K+M GI +
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
++ L+ G+CK GR+ DA+ +++L G D TYT+M++ CK G L+ +
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 401 MEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
M+ +G P+ VTY +++ L + G A+ LL M+ G++
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 180/340 (52%), Gaps = 18/340 (5%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
FN K + + A + ++ R + P + +FN LIN YC +G + F +
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH--- 299
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+++ +PDV YS +I++LCK+ ++ A+ L+ EM + + P+
Sbjct: 300 ---------------QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V +TTLI G G++ +M+ K + PD+ ++ LV+ CK G + A+N++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
MI+ G +PD +TY++L+DG+C +V A +I M + + D +S ++ G+CK
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
V DA ++M I P+ VTY+ ++D CK G ++L+ EM S G P+V+TY+
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
LL+ LCK + NA L+ M + G++P+ TY LL+G
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 169/336 (50%), Gaps = 23/336 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ FN K + L QM+ R PD+FT++ LIN C ++ A +
Sbjct: 273 PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGL 332
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ KRG P+ + F T+I K+ K QPD+V+Y+T+++ CK
Sbjct: 333 FDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ + A N+ M+ + + PD +TYTTLI GFC G ++ A+ + +M I D
Sbjct: 393 NGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVG 452
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
FS LV +CKEG+V +A+ L M++ G KPD VTY+ +MD +C + + M
Sbjct: 453 FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
P V +Y++++NGLCK+ + +A L M + P+ +TY++L++G + S
Sbjct: 513 SDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSS 572
Query: 288 DAWELVNEMHSRGLPPNVITYSSL---LDALCKNHH 320
+ E+ G+ ++ +Y S+ LD K+H
Sbjct: 573 KRYIQKPEI---GIVADLASYKSIVNELDRASKDHR 605
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
+LLD + K + ++ G NVY + IL++ CK G + DAQ+VF ++
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
+ V ++ +ING CK G DE L +ME + P+ TY +I AL ++ D
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 429 AEKLLRQMIARGLL 442
A L +M RGL+
Sbjct: 329 AHGLFDEMCKRGLI 342
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 221/467 (47%), Gaps = 53/467 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + ++ L K + + + L ++M+ + P+++TF I I G+I A+ +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L + G PDVV Y+ +ID+LC + ++ A ++ +M
Sbjct: 281 LKRMDDEG------------------CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG 322
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
R PD VTY TL+ F L ++M PDV TF+ILVDALCK G EA
Sbjct: 323 RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ L VM G P++ TY++L+ G V+ ++ A ++F M + + P +Y + I+
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDY 442
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR------------------- 285
K AL F++M T+ I PN+V ++ + L K+GR
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 286 ----------------ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
I +A +L++EM G P+VI +SL++ L K VD A +
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
+MK + P V TY LL GL K G++++A E+F+ ++ KG + T+ + + LCK+
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
AL ++ KM D GC P+ TY II+ L + G +A QM
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 229/502 (45%), Gaps = 56/502 (11%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M+ P ++ +N L K AI L + M + P+ TFN L +C C ++T
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 61 AFSVLCNIFKRGYQPDTITFNTII----------------KIQGKLAQPDVVMYSTIIDS 104
A +L + G PD T+NTII KL PD V T++
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPG 686
Query: 105 LCKDKLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI-- 161
+ K L+ DAY + + L P + + LI + AV ++V I
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR 746
Query: 162 -----------------------------------NPDVYTFSILVDALCKEGKVKEAKN 186
P + T+++L+ L + ++ A++
Sbjct: 747 DGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 806
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
V + G PDV TY+ L+D Y ++++ +++ M+ E + +++I+I+GL
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 247 KIKMVDDALNLFKQ-MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
K VDDAL+L+ M + +P TY LIDGL KSGR+ +A +L M G PN
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
Y+ L++ K D A +L K+M +G+ P++ TY++L+D LC GR+ + F++
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME-DNGCTPNAVTYEIIIYALFQKG 424
L G N DV Y ++INGL K +EAL L ++M+ G TP+ TY +I L G
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 425 DNDKAEKLLRQMIARGLLTGLF 446
++A K+ ++ GL +F
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVF 1068
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 184/345 (53%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+P + YS+++ L K + ++ L EM + P+V T+T I G++ EA
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+L +M + PDV T+++L+DALC K+ AK V M G KPD VTY +L+D +
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+++ + ++ M + PDV +++I+++ LCK +A + M + I PN+
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY++LI GL + R+ DA EL M S G+ P TY +D K+ +A+ +KM
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
K +GI PN+ L L K GR ++A+++F L G D TY +M+ K G
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
DEA+ L+S+M +NGC P+ + +I L++ D+A K+ +M
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 196/415 (47%), Gaps = 17/415 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + F L + A + ++MD PD+ T+ +LI+ C ++ A V
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ ++PD +T+ T++ +++ PDVV ++ ++D+LCK
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+A++ M + I P++ TY TLI G V +L +A+ L M + P YT
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ + +D K G A M G P++V ++ + +A+ IF +
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ L PD +Y++M+ K+ +D+A+ L +M P+V+ +SLI+ L K+ R+
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+AW++ M L P V+TY++LL L KN + AI L + M +G PN T+ L
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
D LCK + A ++ ++ G DV TY +I GL K+G EA+ +M+
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 227/512 (44%), Gaps = 93/512 (18%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P I+ N SL K A + + ++PD T+N+++ CY +G+I A
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+L + + G +PD I N++I ++L K V++A+ ++ M
Sbjct: 525 LLSEMMENGCEPDVIVVNSLI------------------NTLYKADRVDEAWKMFMRMKE 566
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
++ P VVTY TL++G G+++EA+ L MV K P+ TF+ L D LCK +V
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A +L M+ G PDV TY++++ G +V +A F+ M ++ + PD + ++
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLP 685
Query: 244 GLCKIKMVDDAL---------------NLFKQ-----MHTENITPNVVTYSSLI--DGLC 281
G+ K +++DA NLF + + E N V++S + +G+C
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745
Query: 282 KSG---------------------------------------------------RISDAW 290
+ G I A
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 805
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
++ ++ S G P+V TY+ LLDA K+ +D L K+M N T+ I++ GL
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 351 CKGGRLKDAQEVFQDLLI-KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
K G + DA +++ DL+ + ++ TY +I+GL K G EA L M D GC PN
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
Y I+I + G+ D A L ++M+ G+
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 180/348 (51%), Gaps = 20/348 (5%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
V P L T+N+LI I A V + G PD T+N ++ GK +
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK----- 835
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL-NQM 156
+++ + LY EM + +T+ +ISG G + +A+ L + M
Sbjct: 836 -------------IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+ +P T+ L+D L K G++ EAK + M+ G +P+ Y+ L++G+ E
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+ A +F M + + PD+++YS++++ LC + VD+ L+ FK++ + P+VV Y+ +
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 277 IDGLCKSGRISDAWELVNEMH-SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
I+GL KS R+ +A L NEM SRG+ P++ TY+SL+ L V+ A + +++ G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
+ PNV+T+ L+ G G+ + A V+Q ++ G++ + TY + N
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 171/341 (50%)
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
++++L D + + ++ M + I D TY T+ + G LK+A L +M
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
+ Y+++ L+ L K EA V MI G +P + TYSSLM G +++
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+ M + L P+V +++I I L + +++A + K+M E P+VVTY+ LID L
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
C + ++ A E+ +M + P+ +TY +LLD N +D+ +M+ G +P+V
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
T+TIL+D LCK G +A + + +G ++ TY +I GL + D+AL L
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 401 MEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
ME G P A TY + I + GD+ A + +M +G+
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 166/325 (51%), Gaps = 2/325 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
QP + Y+ +I L + ++ A +++ ++ + PDV TY L+ + G++ E
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGY 210
L +M + T +I++ L K G V +A ++ ++ + P TY L+DG
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
+ +A+ +F M P+ Y+I+ING K D A LFK+M E + P++
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
TYS L+D LC GR+ + E+ GL P+V+ Y+ +++ L K+H ++ A+ L +
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 331 MK-HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
MK +GI P++YTY L+ L G +++A +++ ++ G +V T+ +I G G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 390 LFDEALALMSKMEDNGCTPNAVTYE 414
+ A A+ M G +PN TYE
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYE 1106
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 152/326 (46%), Gaps = 19/326 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N L++ A + Q+ +PD+ T+N L++ Y G+I F +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 65 LCNIFKRGYQPDTITFNTIIK------------------IQGKLAQPDVVMYSTIIDSLC 106
+ + +TIT N +I + + P Y +ID L
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K + +A L+ ML P+ Y LI+GF G+ A L +MV + + PD+
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T+S+LVD LC G+V E + + + G PDVV Y+ +++G + + +A +FN M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 227 -TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
T + PD+ +Y+ +I L MV++A ++ ++ + PNV T+++LI G SG+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSL 311
A+ + M + G PN TY L
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%)
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T + +++AL +GK++E V +M K K D TY ++ + + +A M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ SY+ +I+ L K + +A+ ++++M E P++ TYSSL+ GL K I
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
L+ EM + GL PNV T++ + L + ++ A ++K+M +G P+V TYT+L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+D LC +L A+EVF+ + + D TY +++ + D S+ME +G
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
P+ VT+ I++ AL + G+ +A L M +G+L L
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + L K+ A L + M P+ +NILIN + G+ +A +
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 64 VLCNIFKRGYQPDTITFNTIIK---IQGKLAQ--------------PDVVMYSTIIDSLC 106
+ + K G +PD T++ ++ + G++ + PDVV Y+ II+ L
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 107 KDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
K + +A L++EM R I+PD+ TY +LI I G ++EA + N++ + P+V
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
+TF+ L+ GK + A V M+ GG P+ TY L
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSL 276
K+ D +M R PD+ S + GL D + + FK + N+ T + +
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
++ L G++ + + + M R + + TY ++ +L + A ++KM+ G
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
+ N Y+Y L+ L K +A EV++ ++++G+ ++TY+ ++ GL K D +
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
L+ +ME G PN T+ I I L + G ++A ++L++M G
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT-RMELAPDVQSYSIMINGLCKIK 249
MI+ KPD+ + + G + + + F ++ + L ++ + M+ L
Sbjct: 73 MIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDG 132
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+++ +F M I + TY ++ L G + A + +M G N +Y+
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
L+ L K+ A+ + ++M +G P++ TY+ L+ GL K + + +++
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G +V T+TI I L + G +EA ++ +M+D GC P+ VTY ++I AL D A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 430 EKLLRQM 436
+++ +M
Sbjct: 313 KEVFEKM 319
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 216/408 (52%), Gaps = 22/408 (5%)
Query: 35 FRRVMPD-----LFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK---- 85
FRR++ +++ I++ C G++ + ++ +G +P+ T+NTII
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK 271
Query: 86 ------IQG--KLAQPDVVMYSTIIDSL-----CKDKLVNDAYNLYSEMLAKRISPDVVT 132
++G K+ + D V+Y+ + +L K+ ++DA L+ EM + I DV
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
YT+LIS C G +K A L +++ K ++P YT+ L+D +CK G++ A+ ++ M
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
G V +++L+DGYC V++A I++ M + DV + + + + ++K D
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
+A +M + + V+Y++LID CK G + +A L EM S+G+ PN ITY+ ++
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 372
A CK + A L M+ G+ P+ YTYT L+ G C + +A +F ++ +KG +
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 373 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
+ TYT+MI+GL K G DEA L +M+ G T + Y +I ++
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 195/374 (52%), Gaps = 17/374 (4%)
Query: 29 LSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQ- 87
L ++ + + P+ +T+N +IN Y + VL + K G + +T+ ++++
Sbjct: 246 LIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV 305
Query: 88 --GKLA--------------QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVV 131
GK++ + DV +Y+++I C+ + A+ L+ E+ K +SP
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
TY LI G C VG++ A L+N+M K +N F+ L+D C++G V EA + VM
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
+ G + DV T +++ + + ++A+ M + SY+ +I+ CK V
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
++A LF +M ++ + PN +TY+ +I CK G+I +A +L M + G+ P+ TY+SL
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+ C +VD A+ L +M +G+ N TYT+++ GL K G+ +A ++ ++ KGY
Sbjct: 546 IHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Query: 372 NLDVRTYTIMINGL 385
+D + YT +I +
Sbjct: 606 TIDNKVYTALIGSM 619
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 178/335 (53%)
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K + ++ ++ M+ + V + T ++ G C G+++++ L+ + +K I P+ Y
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ +++A K+ + VL VM K G + VTY+ LM+ +++ AE +F+ M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ DV Y+ +I+ C+ + A LF ++ + ++P+ TY +LIDG+CK G +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
A L+NEM S+G+ + +++L+D C+ VD A + M+ +G +V+T +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+ R +A++ ++ G L +YT +I+ CK+G +EA L +M G
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
PNA+TY ++IYA ++G +A KL M A G+
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 184/377 (48%), Gaps = 35/377 (9%)
Query: 99 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
+ +++ LC+ V + L E K I P+ TY T+I+ + G+L M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
+ + T+++L++ K GK+ +A+ + M + G + DV Y+SL+ C + +
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
A +F+ +T L+P +Y +I+G+CK+ + A L +M ++ + V +++LID
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVIT------------------------------- 307
G C+ G + +A + + M +G +V T
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 308 ----YSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
Y++L+D CK +V+ A L +M +G+ PN TY +++ CK G++K+A+++
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
++ G + D TYT +I+G C DEA+ L S+M G N+VTY ++I L +
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 424 GDNDKAEKLLRQMIARG 440
G +D+A L +M +G
Sbjct: 588 GKSDEAFGLYDEMKRKG 604
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 151/298 (50%)
Query: 144 GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
G +E + + + MV K ++ D + + + A K ++ + M+ G K V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+ +++G C EV K++ + + + P+ +Y+ +IN K + + K M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
+ + N VTY+ L++ K+G++SDA +L +EM RG+ +V Y+SL+ C+ ++
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
A L ++ +G+ P+ YTY L+DG+CK G + A+ + ++ KG N+ + +I+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
G C+ G+ DEA + ME G + T I + D+A++ L +M+ G+
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 4/279 (1%)
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
F + VD G +E V M+K G D + + ++ +IF M
Sbjct: 161 FRVYVD----NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMV 216
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ V S +I++ GLC+ V+ + L K+ + I P TY+++I+ K S
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
++ M G+ N +TY+ L++ KN + +A L +M+ +GI +V+ YT L+
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
C+ G +K A +F +L KG + TY +I+G+CK G A LM++M+ G
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
V + +I +KG D+A + M +G +F
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 17/259 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + + K A L +M + V FN LI+ YC G + A
Sbjct: 361 SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASM 420
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPD-----------------VVMYSTIIDSLC 106
+ + ++G+Q D T NTI +L + D V Y+ +ID C
Sbjct: 421 IYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYC 480
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K+ V +A L+ EM +K + P+ +TY +I +C G++KEA L M ++PD Y
Sbjct: 481 KEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSY 540
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ L+ C V EA + + M G + VTY+ ++ G + ++A +++ M
Sbjct: 541 TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Query: 227 TRMELAPDVQSYSIMINGL 245
R D + Y+ +I +
Sbjct: 601 KRKGYTIDNKVYTALIGSM 619
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 217/443 (48%), Gaps = 56/443 (12%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
V D + F +LI+ Y +G A + + +PD T+N I++ V+M
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR---------VMM 173
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
+ L A+ +Y+EML SP++ T+ L+ G G+ +A + + M
Sbjct: 174 REEVFFML--------AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMT 225
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
+ I+P+ T++IL+ LC+ G +A+ + M G PD V +++L+DG+C + +
Sbjct: 226 GRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMV 285
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+A ++ + ++ YS +I+GL + + A L+ M +NI P+++ Y+ LI
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILI 345
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
GL K+G+I DA +L++ M S+G+ P+ Y++++ ALC ++ SL +M
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF 405
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
P+ T+TIL+ +C+ G +++A+E+F ++ G + V T+ +I+GLCK G EA L
Sbjct: 406 PDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 398 MSKME---------------------------------------DNGCTPNAVTYEIIIY 418
+ KME D G +P+ V+Y ++I
Sbjct: 466 LHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLIN 525
Query: 419 ALFQKGDNDKAEKLLRQMIARGL 441
+ GD D A KLL + +GL
Sbjct: 526 GFCRAGDIDGALKLLNVLQLKGL 548
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 182/348 (52%), Gaps = 9/348 (2%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
+ +ID L +D + + E+ + +S D + LIS + +G ++AV +M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAV-----MIKGGEKPDVVTYSSLMDGYCL 212
PDV+T+++++ + +E E +LA M+K P++ T+ LMDG
Sbjct: 155 EFDCRPDVFTYNVILRVMMRE----EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ A+ +F+ MT ++P+ +Y+I+I+GLC+ DDA LF +M T P+ V
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
+++L+DG CK GR+ +A+EL+ G + YSSL+D L + A L M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I P++ YTIL+ GL K G+++DA ++ + KG + D Y +I LC GL +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
E +L +M + P+A T+ I+I ++ + G +AE++ ++ G
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 186/381 (48%), Gaps = 21/381 (5%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + F L K + A + M R + P+ T+ ILI+ C G A
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARK 254
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQP-----------------DVVMYSTIIDSLC 106
+ + G PD++ N ++ KL + + YS++ID L
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ + A+ LY+ ML K I PD++ YT LI G G++++A+ LL+ M K I+PD Y
Sbjct: 315 RARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTY 374
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
++ ++ ALC G ++E +++ M + PD T++ L+ C V +AE+IF +
Sbjct: 375 CYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEI 434
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS----SLIDGLCK 282
+ +P V +++ +I+GLCK + +A L +M + S D + +
Sbjct: 435 EKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVE 494
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
SG I A+ + G P++++Y+ L++ C+ +D A+ L+ ++ +G+ P+ T
Sbjct: 495 SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVT 554
Query: 343 YTILLDGLCKGGRLKDAQEVF 363
Y L++GL + GR ++A ++F
Sbjct: 555 YNTLINGLHRVGREEEAFKLF 575
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 197/431 (45%), Gaps = 39/431 (9%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
++ L + + Y A L M + + PD+ + ILI G+I A +L ++
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+G PDT +N +IK +LC L+ + +L EM PD
Sbjct: 366 SKGISPDTYCYNAVIK------------------ALCGRGLLEEGRSLQLEMSETESFPD 407
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
T+T LI C G ++EA + ++ +P V TF+ L+D LCK G++KEA+ +L
Sbjct: 408 ACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLH 467
Query: 190 VMIKGGEKPDVV----------TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
M G +P + ++ ++++ ++ +T + +PD+ SY+
Sbjct: 468 KMEVG--RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGS----SPDIVSYN 521
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
++ING C+ +D AL L + + ++P+ VTY++LI+GL + GR +A++L
Sbjct: 522 VLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDF 581
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISL-IKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
P V Y SL+ C+ V A +L +K +K L + I + K G +
Sbjct: 582 RHSPAV--YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEI--EQCFKEGETER 637
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
A +L + L + YTI + GLC+ G F EAL + S + + + +I+
Sbjct: 638 ALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIH 697
Query: 419 ALFQKGDNDKA 429
L ++ D A
Sbjct: 698 GLCKREQLDAA 708
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 9/279 (3%)
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
F +++D L ++ L + GG D + L+ Y + KA + F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDD-----ALNLFKQMHTENITPNVVTYSSLIDGLCK 282
+ PDV +Y++++ ++ M ++ A ++ +M N +PN+ T+ L+DGL K
Sbjct: 155 EFDCRPDVFTYNVIL----RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
GR SDA ++ ++M RG+ PN +TY+ L+ LC+ D+A L +M+ G P+
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
+ LLDG CK GR+ +A E+ + G+ L +R Y+ +I+GL + + +A L + M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
P+ + Y I+I L + G + A KLL M ++G+
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 116/241 (48%), Gaps = 11/241 (4%)
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
+ ++I+ L + D +++ + ++ + + LI K G A E M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 298 SRGLPPNVITYSSLLDALCKNH-HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
P+V TY+ +L + + A ++ +M PN+YT+ IL+DGL K GR
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
DAQ++F D+ +G + + TYTI+I+GLC+ G D+A L +M+ +G P++V + +
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 417 IYALFQKGDNDKAEKLLRQMIARG----------LLTGLFYATEFEAVEELSAPGLRSPV 466
+ + G +A +LLR G L+ GLF A + EL A L+ +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 467 R 467
+
Sbjct: 335 K 335
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 210/412 (50%), Gaps = 19/412 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N LV +A + + M+ R+ PD+ T+N +I YC GQ A
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279
Query: 65 LCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLCK 107
L ++ RG++ D IT+ T+I+ + K Q +S +I LCK
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +N+ Y ++ M+ K P+V YT LI G+ G +++A+ LL++M+ + PDV T
Sbjct: 340 EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 399
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+S++V+ LCK G+V+EA + G + + YSSL+DG V++AE +F M+
Sbjct: 400 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPNVVTYSSLIDGLCKSGRI 286
D Y+ +I+ K + VD+A+ LFK+M E V TY+ L+ G+ K R
Sbjct: 460 EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRN 519
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A +L + M +G+ P + +L LC + V A ++ ++ G++ + +
Sbjct: 520 EEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-M 578
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
++ LCK GR+K+A ++ + +G + R T+MIN L K G D A+ LM
Sbjct: 579 INTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 200/413 (48%), Gaps = 19/413 (4%)
Query: 46 NILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK-----------------IQG 88
N LI + LG + V + + G +P T+N ++ ++
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 89 KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKE 148
+PD+V Y+T+I CK A +M + D +TY T+I
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 149 AVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
V L +M K I + FS+++ LCKEGK+ E V MI+ G KP+V Y+ L+D
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
GY V A + + M PDV +YS+++NGLCK V++AL+ F + +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
N + YSSLIDGL K+GR+ +A L EM +G + Y++L+DA K+ VD AI+L
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 329 KKM-KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 387
K+M + +G VYTYTILL G+ K R ++A +++ ++ KG + + GLC
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
G A ++ ++ G +A E +I L + G +A KL + RG
Sbjct: 551 SGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERG 602
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 187/380 (49%), Gaps = 36/380 (9%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y +++D L K V+ + SE+ V LI F +G ++E + + +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
I P +YT++ L++ L V A+ V VM G KPD+VTY++++ GYC +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 218 KA-EDIFNTMTRMELAPDV----------------------------------QSYSIMI 242
KA E + + TR A + ++S++I
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
GLCK +++ +F+ M + PNV Y+ LIDG KSG + DA L++ M G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P+V+TYS +++ LCKN V+ A+ + G+ N Y+ L+DGL K GR+ +A+ +
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM-EDNGCTPNAVTYEIIIYALF 421
F+++ KG D Y +I+ K DEA+AL +M E+ GC TY I++ +F
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
Query: 422 QKGDNDKAEKLLRQMIARGL 441
++ N++A KL MI +G+
Sbjct: 515 KEHRNEEALKLWDMMIDKGI 534
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 183/352 (51%), Gaps = 1/352 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+P + Y+ +++ L V+ A ++ M + RI PD+VTY T+I G+C GQ ++A+
Sbjct: 219 EPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAME 278
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
L M + D T+ ++ A + + M + G + +S ++ G C
Sbjct: 279 KLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC 338
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
++N+ +F M R P+V Y+++I+G K V+DA+ L +M E P+VV
Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 398
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TYS +++GLCK+GR+ +A + + GL N + YSSL+D L K VD A L ++M
Sbjct: 399 TYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGL 390
+G + Y Y L+D K ++ +A +F+ + + G + V TYTI+++G+ K+
Sbjct: 459 SEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHR 518
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+EAL L M D G TP A + + L G +A K+L ++ G++
Sbjct: 519 NEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 135/291 (46%), Gaps = 21/291 (7%)
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGE---KPDVV------------------TYSSLMDGY 210
+D C++ +K + N ++ ++K E KPD+ Y SL+D
Sbjct: 103 LDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVL 162
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
L +V++ + + + + E V + + +I K+ MV++ L ++++M I P +
Sbjct: 163 ALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
TY+ L++GL + + A + M S + P+++TY++++ CK A+ ++
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
M+ +G + TY ++ ++Q++ KG + ++++I GLCK+G
Sbjct: 283 METRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK 342
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+E + M G PN Y ++I + G + A +LL +MI G
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 218/451 (48%), Gaps = 48/451 (10%)
Query: 42 LFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA---------- 91
++ F+ LI+ Y G A SV ++ + G +P+ +T+N +I GK
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 92 --------QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV 143
QPD + +++++ + L A NL+ EM +RI DV +Y TL+ C
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 144 GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
GQ+ A +L QM +K I P+V ++S ++D K G+ EA N+ M G D V+Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
++L+ Y V +A DI M + + DV +Y+ ++ G K D+ +F +M
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
E++ PN++TYS+LIDG K G +A E+ E S GL +V+ YS+L+DALCKN V +
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCK------------GGRLKDAQEVFQDLLIKGY 371
A+SLI +M +GI PNV TY ++D + GG L + L
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEG 627
Query: 372 NLDVRTY---TIMINGL----CKDGLFDEA--LALMSKMEDNGCTPNAVTYEIIIYALFQ 422
N ++ + T N C++G+ + + L + KM PN VT+ I+ A +
Sbjct: 628 NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
Query: 423 KGDNDKAEKLLRQM---------IARGLLTG 444
+ A LL ++ + GLL G
Sbjct: 688 CNSFEDASMLLEELRLFDNKVYGVVHGLLMG 718
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 185/379 (48%), Gaps = 43/379 (11%)
Query: 87 QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
QGKLA S +I +L + V A ++ A V ++ LIS + G
Sbjct: 232 QGKLA-------SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 284
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEG-KVKEAKNVLAVMIKGGEKPDVVTYSS 205
+EA+ + N M + P++ T++ ++DA K G + K+ M + G +PD +T++S
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
L+ A ++F+ MT + DV SY+ +++ +CK +D A + QM +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMH---------------------------- 297
I PNVV+YS++IDG K+GR +A L EM
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 298 -------SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
S G+ +V+TY++LL K D + +MK + +LPN+ TY+ L+DG
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
KGG K+A E+F++ G DV Y+ +I+ LCK+GL A++L+ +M G +PN
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 411 VTYEIIIYALFQKGDNDKA 429
VTY II A + D++
Sbjct: 585 VTYNSIIDAFGRSATMDRS 603
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 214/454 (47%), Gaps = 55/454 (12%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I FN + + A +L +M RR+ D+F++N L++ C GQ+ AF +
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L ++ K P+VV YST+ID K ++A NL+ EM
Sbjct: 397 LA------------------QMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
I+ D V+Y TL+S + VG+ +EA+ +L +M I DV T++ L+ K+GK E
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
K V M + P+++TYS+L+DGY +A +IF L DV YS +I+
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
LCK +V A++L +M E I+PNVVTY+S+ID +S + + + N LP +
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN---GGSLPFS 615
Query: 305 VITYSSLLDAL----------------------CKN--HHVDNAISLIKKMKHQGILPNV 340
S+L + C+ + + + +KM I PNV
Sbjct: 616 SSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNV 675
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC---KDGLFDEALAL 397
T++ +L+ + +DA + ++L + D + Y + ++GL ++ ++ +A +L
Sbjct: 676 VTFSAILNACSRCNSFEDASMLLEELRL----FDNKVYGV-VHGLLMGQRENVWLQAQSL 730
Query: 398 MSKM-EDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
K+ E +G T +A Y + L+ G AE
Sbjct: 731 FDKVNEMDGSTASAF-YNALTDMLWHFGQKRGAE 763
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 15/313 (4%)
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
S ++ L + GKV AK + GG V +S+L+ Y +A +FN+M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 229 MELAPDVQSYSIMINGLCKIKM-VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
L P++ +Y+ +I+ K M F +M + P+ +T++SL+ + G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A L +EM +R + +V +Y++LLDA+CK +D A ++ +M + I+PNV +Y+ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
DG K GR +A +F ++ G LD +Y +++ K G +EAL ++ +M G
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLL----RQMIARGLLT----------GLFYATEFEA 453
+ VTY ++ ++G D+ +K+ R+ + LLT G Y E
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 454 VEELSAPGLRSPV 466
E + GLR+ V
Sbjct: 537 FREFKSAGLRADV 549
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 220/439 (50%), Gaps = 17/439 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+PP FN + L + + L +MD ++ PD+ T ILIN C ++ A
Sbjct: 294 APP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM-L 122
V + RG + D G + + D + ++T+ID LCK + +A L M L
Sbjct: 351 VFEKM--RGKRTD----------DGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
+R +P+ VTY LI G+C G+L+ A ++++M I P+V T + +V +C+ +
Sbjct: 399 EERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
A M K G K +VVTY +L+ C V+ V KA + M +PD + Y +I
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
+GLC+++ DA+ + +++ + +++ Y+ LI C +E++ +M G
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKK 578
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P+ ITY++L+ K+ ++ ++++M+ G+ P V TY ++D C G L +A ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 363 FQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
F+D+ L N + Y I+IN K G F +AL+L +M+ PN TY + L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 422 QKGDNDKAEKLLRQMIARG 440
+K + KL+ +M+ +
Sbjct: 699 EKTQGETLLKLMDEMVEQS 717
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 216/432 (50%), Gaps = 44/432 (10%)
Query: 46 NILINCYCHLGQITSAFSVLCNIFKRG--YQPDTITFNTIIK--IQGKL----------- 90
N++++ G + AF VL + ++ + P+ IT + ++ +G+L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALIS 248
Query: 91 ------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
P+ V + I SLCK+ N A+++ S+++ + + + L+S C+
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS--CLGR 306
Query: 145 QLKEAVGLLNQMVLK----SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE---- 196
+ + +N +VLK I PDV T IL++ LCK +V EA V M +G
Sbjct: 307 NMD--ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM-RGKRTDDG 363
Query: 197 ---KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL----APDVQSYSIMINGLCKIK 249
K D + +++L+DG C V + +AE++ + RM+L AP+ +Y+ +I+G C+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEEL---LVRMKLEERCAPNAVTYNCLIDGYCRAG 420
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
++ A + +M + I PNVVT ++++ G+C+ ++ A +M G+ NV+TY
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+L+ A C +V+ A+ +KM G P+ Y L+ GLC+ R DA V + L
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G++LD+ Y ++I C ++ +++ ME G P+++TY +I + D +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 430 EKLLRQMIARGL 441
E+++ QM GL
Sbjct: 601 ERMMEQMREDGL 612
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 176/377 (46%), Gaps = 21/377 (5%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFR-RVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I FN L K A L +M R P+ T+N LI+ YC G++ +A V+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 67 NIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDK 109
+ + +P+ +T NTI+ ++ + + +VV Y T+I + C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
V A Y +ML SPD Y LISG C V + +A+ ++ ++ + D+ ++
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
+L+ C + ++ +L M K G+KPD +TY++L+ + + E + M
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQM--HTENITPNVVTYSSLIDGLCKSGRIS 287
L P V +Y +I+ C + +D+AL LFK M H++ + PN V Y+ LI+ K G
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILINAFSKLGNFG 669
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A L EM + + PNV TY++L L + + + L+ +M Q PN T IL+
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Query: 348 DGLCKGGRLKDAQEVFQ 364
+ L L ++ Q
Sbjct: 730 ERLSGSDELVKLRKFMQ 746
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 208/386 (53%), Gaps = 13/386 (3%)
Query: 55 LGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDA 114
LG + S+F+ + + F T + +Q + ++ ++++++L K V DA
Sbjct: 141 LGFLVSSFA----------EKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDA 190
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
L+ E L + D T+ LI G C VG+ ++A+ LL M PD+ T++ L+
Sbjct: 191 MKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 175 LCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
CK ++ +A + + G PDVVTY+S++ GYC ++ +A + + M R+ + P
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
+++++++G K + A + +M + P+VVT++SLIDG C+ G++S + L
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
EM++RG+ PN TYS L++ALC + + A L+ ++ + I+P + Y ++DG CK
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G++ +A + +++ K D T+TI+I G C G EA+++ KM GC+P+ +T
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITV 490
Query: 414 EIIIYALFQKGDNDKAEKLLRQMIAR 439
++ L + G +A L IAR
Sbjct: 491 SSLLSCLLKAGMAKEAYHL--NQIAR 514
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 187/355 (52%), Gaps = 19/355 (5%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N +LVK A+ L + + D TFNILI C +G+ A +L
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG---- 230
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI-SPD 129
+ G +PD+V Y+T+I CK +N A ++ ++ + + SPD
Sbjct: 231 --------------VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VVTYT++ISG+C G+++EA LL+ M+ I P TF++LVD K G++ A+ +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
MI G PDVVT++SL+DGYC V +V++ ++ M + P+ +YSI+IN LC
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ A L Q+ +++I P Y+ +IDG CK+G++++A +V EM + P+ IT++
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
L+ C + A+S+ KM G P+ T + LL L K G K+A + Q
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 194/377 (51%), Gaps = 34/377 (9%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ-- 155
Y+ + SLCK L + A ++ M + +SP+ L+S F G+L A LL Q
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 156 ------MVLKSI-------------------------NPDVYTFSILVDALCKEGKVKEA 184
MV+ S+ D TF+IL+ LC GK ++A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL-APDVQSYSIMIN 243
+L VM G +PD+VTY++L+ G+C NE+NKA ++F + + +PDV +Y+ MI+
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
G CK + +A +L M I P VT++ L+DG K+G + A E+ +M S G P
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+V+T++SL+D C+ V L ++M +G+ PN +TY+IL++ LC RL A+E+
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
L K Y +I+G CK G +EA ++ +ME C P+ +T+ I+I K
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 424 GDNDKAEKLLRQMIARG 440
G +A + +M+A G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 173/322 (53%), Gaps = 2/322 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D ++ +I LC A L M PD+VTY TLI GFC +L +A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 154 NQMVLKSI-NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+ S+ +PDV T++ ++ CK GK++EA ++L M++ G P VT++ L+DGY
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
E+ AE+I M PDV +++ +I+G C++ V L+++M+ + PN T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
YS LI+ LC R+ A EL+ ++ S+ + P Y+ ++D CK V+ A ++++M+
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ P+ T+TIL+ G C GR+ +A +F ++ G + D T + +++ L K G+
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 393 EALALMSKMEDNGCTPNAVTYE 414
EA L +++ G + N V E
Sbjct: 505 EAYHL-NQIARKGQSNNVVPLE 525
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 162/323 (50%), Gaps = 5/323 (1%)
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
I TY L C G A + M ++P+ LV + ++GK+ A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 186 NVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
A++++ E + + +SL++ ++ V A +F+ R + D ++++I+I G
Sbjct: 159 ---ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PP 303
LC + + AL L M P++VTY++LI G CKS ++ A E+ ++ S + P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+V+TY+S++ CK + A SL+ M GI P T+ +L+DG K G + A+E+
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
++ G DV T+T +I+G C+ G + L +M G PNA TY I+I AL +
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 424 GDNDKAEKLLRQMIARGLLTGLF 446
KA +LL Q+ ++ ++ F
Sbjct: 396 NRLLKARELLGQLASKDIIPQPF 418
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 9/291 (3%)
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
+I +T+++L +LCK G A + M K D V+ ++ + G+ + + K
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECM-----KSDGVSPNNRLLGFLVSSFAEKG 152
Query: 220 EDIFNT---MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+ F T + E+ + ++N L K+ V+DA+ LF + + T++ L
Sbjct: 153 KLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I GLC G+ A EL+ M G P+++TY++L+ CK++ ++ A + K +K +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 337 L-PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
P+V TYT ++ G CK G++++A + D+L G T+ ++++G K G A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
+ KM GC P+ VT+ +I + G + +L +M ARG+ F
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 21/268 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ + + K A SL M + P TFN+L++ Y G++ +A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ RG I+F PDVV ++++ID C+ V+ + L+ EM A
Sbjct: 334 I------RG---KMISFGCF---------PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ + P+ TY+ LI+ C +L +A LL Q+ K I P + ++ ++D CK GKV E
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A ++ M K KPD +T++ L+ G+C+ + +A IF+ M + +PD + S +++
Sbjct: 436 ANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 244 GLCKIKMVDDALNL---FKQMHTENITP 268
L K M +A +L ++ + N+ P
Sbjct: 496 CLLKAGMAKEAYHLNQIARKGQSNNVVP 523
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 208/386 (53%), Gaps = 13/386 (3%)
Query: 55 LGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDA 114
LG + S+F+ + + F T + +Q + ++ ++++++L K V DA
Sbjct: 141 LGFLVSSFA----------EKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDA 190
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
L+ E L + D T+ LI G C VG+ ++A+ LL M PD+ T++ L+
Sbjct: 191 MKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 175 LCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
CK ++ +A + + G PDVVTY+S++ GYC ++ +A + + M R+ + P
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
+++++++G K + A + +M + P+VVT++SLIDG C+ G++S + L
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
EM++RG+ PN TYS L++ALC + + A L+ ++ + I+P + Y ++DG CK
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G++ +A + +++ K D T+TI+I G C G EA+++ KM GC+P+ +T
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITV 490
Query: 414 EIIIYALFQKGDNDKAEKLLRQMIAR 439
++ L + G +A L IAR
Sbjct: 491 SSLLSCLLKAGMAKEAYHL--NQIAR 514
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 187/355 (52%), Gaps = 19/355 (5%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N +LVK A+ L + + D TFNILI C +G+ A +L
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLG---- 230
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI-SPD 129
+ G +PD+V Y+T+I CK +N A ++ ++ + + SPD
Sbjct: 231 --------------VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VVTYT++ISG+C G+++EA LL+ M+ I P TF++LVD K G++ A+ +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
MI G PDVVT++SL+DGYC V +V++ ++ M + P+ +YSI+IN LC
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ A L Q+ +++I P Y+ +IDG CK+G++++A +V EM + P+ IT++
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
L+ C + A+S+ KM G P+ T + LL L K G K+A + Q
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 194/377 (51%), Gaps = 34/377 (9%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ-- 155
Y+ + SLCK L + A ++ M + +SP+ L+S F G+L A LL Q
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 156 ------MVLKSI-------------------------NPDVYTFSILVDALCKEGKVKEA 184
MV+ S+ D TF+IL+ LC GK ++A
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL-APDVQSYSIMIN 243
+L VM G +PD+VTY++L+ G+C NE+NKA ++F + + +PDV +Y+ MI+
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
G CK + +A +L M I P VT++ L+DG K+G + A E+ +M S G P
Sbjct: 286 GYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP 345
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+V+T++SL+D C+ V L ++M +G+ PN +TY+IL++ LC RL A+E+
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
L K Y +I+G CK G +EA ++ +ME C P+ +T+ I+I K
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 424 GDNDKAEKLLRQMIARG 440
G +A + +M+A G
Sbjct: 466 GRMFEAVSIFHKMVAIG 482
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 173/322 (53%), Gaps = 2/322 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D ++ +I LC A L M PD+VTY TLI GFC +L +A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 154 NQMVLKSI-NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+ S+ +PDV T++ ++ CK GK++EA ++L M++ G P VT++ L+DGY
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
E+ AE+I M PDV +++ +I+G C++ V L+++M+ + PN T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
YS LI+ LC R+ A EL+ ++ S+ + P Y+ ++D CK V+ A ++++M+
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ P+ T+TIL+ G C GR+ +A +F ++ G + D T + +++ L K G+
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAK 504
Query: 393 EALALMSKMEDNGCTPNAVTYE 414
EA L +++ G + N V E
Sbjct: 505 EAYHL-NQIARKGQSNNVVPLE 525
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 162/323 (50%), Gaps = 5/323 (1%)
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
I TY L C G A + M ++P+ LV + ++GK+ A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 186 NVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
A++++ E + + +SL++ ++ V A +F+ R + D ++++I+I G
Sbjct: 159 ---ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PP 303
LC + + AL L M P++VTY++LI G CKS ++ A E+ ++ S + P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+V+TY+S++ CK + A SL+ M GI P T+ +L+DG K G + A+E+
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
++ G DV T+T +I+G C+ G + L +M G PNA TY I+I AL +
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 424 GDNDKAEKLLRQMIARGLLTGLF 446
KA +LL Q+ ++ ++ F
Sbjct: 396 NRLLKARELLGQLASKDIIPQPF 418
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 9/291 (3%)
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
+I +T+++L +LCK G A + M K D V+ ++ + G+ + + K
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECM-----KSDGVSPNNRLLGFLVSSFAEKG 152
Query: 220 EDIFNT---MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+ F T + E+ + ++N L K+ V+DA+ LF + + T++ L
Sbjct: 153 KLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I GLC G+ A EL+ M G P+++TY++L+ CK++ ++ A + K +K +
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 337 L-PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
P+V TYT ++ G CK G++++A + D+L G T+ ++++G K G A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
+ KM GC P+ VT+ +I + G + +L +M ARG+ F
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 133/268 (49%), Gaps = 21/268 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ + + K A SL M + P TFN+L++ Y G++ +A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ RG I+F PDVV ++++ID C+ V+ + L+ EM A
Sbjct: 334 I------RG---KMISFGCF---------PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ + P+ TY+ LI+ C +L +A LL Q+ K I P + ++ ++D CK GKV E
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A ++ M K KPD +T++ L+ G+C+ + +A IF+ M + +PD + S +++
Sbjct: 436 ANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 244 GLCKIKMVDDALNL---FKQMHTENITP 268
L K M +A +L ++ + N+ P
Sbjct: 496 CLLKAGMAKEAYHLNQIARKGQSNNVVP 523
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 219/439 (49%), Gaps = 17/439 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+PP FN + L + + L +MD ++ PD+ T ILIN C ++ A
Sbjct: 294 APP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM-L 122
V + RG + D G + + D + ++T+ID LCK + +A L M L
Sbjct: 351 VFEQM--RGKRTD----------DGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
+R P+ VTY LI G+C G+L+ A ++++M I P+V T + +V +C+ +
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
A M K G K +VVTY +L+ C V+ V KA + M +PD + Y +I
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
+GLC+++ DA+ + +++ + +++ Y+ LI C +E++ +M G
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P+ ITY++L+ K+ ++ ++++M+ G+ P V TY ++D C G L +A ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 363 FQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
F+D+ L N + Y I+IN K G F +AL+L +M+ PN TY + L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 422 QKGDNDKAEKLLRQMIARG 440
+K + KL+ +M+ +
Sbjct: 699 EKTQGETLLKLMDEMVEQS 717
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 212/432 (49%), Gaps = 44/432 (10%)
Query: 46 NILINCYCHLGQITSAFSVLCNIFKRG--YQPDTITFNTII------------------- 84
N++++ G + AF VL + ++ + P+ IT + ++
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 85 KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
+ P+ V + I SLCK+ N A+++ S+++ + + + L+S C+
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGR 306
Query: 145 QLKEAVGLLNQMVLK----SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE---- 196
+ + +N +VLK I PDV T IL++ LCK +V EA V M +G
Sbjct: 307 NMD--ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM-RGKRTDDG 363
Query: 197 ---KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL----APDVQSYSIMINGLCKIK 249
K D + +++L+DG C V + +AE++ + RM+L P+ +Y+ +I+G C+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEEL---LVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
++ A + +M + I PNVVT ++++ G+C+ ++ A +M G+ NV+TY
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+L+ A C +V+ A+ +KM G P+ Y L+ GLC+ R DA V + L
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G++LD+ Y ++I C ++ +++ ME G P+++TY +I + D +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 430 EKLLRQMIARGL 441
E+++ QM GL
Sbjct: 601 ERMMEQMREDGL 612
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 177/377 (46%), Gaps = 21/377 (5%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFR-RVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I FN L K A L +M R +P+ T+N LI+ YC G++ +A V+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 67 NIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDK 109
+ + +P+ +T NTI+ ++ + + +VV Y T+I + C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
V A Y +ML SPD Y LISG C V + +A+ ++ ++ + D+ ++
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
+L+ C + ++ +L M K G+KPD +TY++L+ + + E + M
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQM--HTENITPNVVTYSSLIDGLCKSGRIS 287
L P V +Y +I+ C + +D+AL LFK M H++ + PN V Y+ LI+ K G
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILINAFSKLGNFG 669
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A L EM + + PNV TY++L L + + + L+ +M Q PN T IL+
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Query: 348 DGLCKGGRLKDAQEVFQ 364
+ L L ++ Q
Sbjct: 730 ERLSGSDELVKLRKFMQ 746
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 216/434 (49%), Gaps = 21/434 (4%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+++F + L K K + +L M+ +PD++ FN+ ++ C ++ A +
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+RG +PDVV Y+ +I+ L + V DA +++ M+ +SPD
Sbjct: 142 QRG------------------REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKS-INPDVYTFSILVDALCKEGKVKEAKNVL 188
L+ G C ++ A ++ + + + + ++ L+ CK G++++A+ +
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
+ M K G +PD+VTY+ L++ Y N + +AE + M R + D SY+ ++ C++
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRV 303
Query: 249 KMVDDALN-LFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
D N + K+M +VV+YS+LI+ C++ A+ L EM +G+ NV+T
Sbjct: 304 SHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 308 YSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLL 367
Y+SL+ A + + A L+ +M G+ P+ YT +LD LCK G + A VF D++
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI 422
Query: 368 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDND 427
D +Y +I+GLC+ G EA+ L M+ C P+ +T++ II L +
Sbjct: 423 EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLS 482
Query: 428 KAEKLLRQMIARGL 441
A K+ QM+ +G
Sbjct: 483 AAYKVWDQMMDKGF 496
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 4/355 (1%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y+ I L ++ A +Y +M S TY+ ISG C V + LL+ M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
PD++ F++ +D LC+E KV A M++ G +PDVV+Y+ L++G +V
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF-KQMHTENITPNVVTYSSL 276
A +I+N M R ++PD ++ + ++ GLC + VD A + +++ + + + V Y++L
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I G CK+GRI A L + M G P+++TY+ LL+ N+ + A ++ +M GI
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQE-VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
+ Y+Y LL C+ + +++ +G+ DV +Y+ +I C+ +A
Sbjct: 287 QLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAY 345
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG-LFYAT 449
L +M G N VTY +I A ++G++ A+KLL QM GL +FY T
Sbjct: 346 RLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 158/324 (48%), Gaps = 2/324 (0%)
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
+ Y + I+ G + AV + ++M S + ++ + L +E + + A+ +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M G TYS + G C V + + + + + M + PD+ ++++ ++ LC+
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
V A+ F M P+VV+Y+ LI+GL ++G+++DA E+ N M G+ P+ ++
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 311 LLDALCKNHHVDNAISLI-KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
L+ LC VD A ++ +++K + + Y L+ G CK GR++ A+ + +
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G D+ TY +++N + + A +M++M +G +A +Y ++ + DK
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 430 EK-LLRQMIARGLLTGLFYATEFE 452
++++M RG + Y+T E
Sbjct: 310 YNFMVKEMEPRGFCDVVSYSTLIE 333
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 11/234 (4%)
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+Y I L K M+D+A+ +F +M + Y+ I L + R A + +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
G TYS + LCK D +L+ M+ G +P+++ + + LD LC+ ++
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
A + F ++ +G DV +YTI+INGL + G +A+ + + M +G +P+ +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 417 IYALFQKGDNDKAEKLLRQMI--AR---------GLLTGLFYATEFEAVEELSA 459
+ L D A +++ + I AR L++G A E E L +
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKS 244
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 205/407 (50%), Gaps = 24/407 (5%)
Query: 29 LSQQMDFRRVM------PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNT 82
L + M RVM PD T+N++I C G I +A +L ++ G PD IT+NT
Sbjct: 155 LDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNT 214
Query: 83 IIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
+I+ + A + + L P ++TYT L+ C
Sbjct: 215 VIRCMFDYGNAE------------------QAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
A+ +L M ++ PD+ T++ LV+ C+ G ++E +V+ ++ G + + VT
Sbjct: 257 YCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 203 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
Y++L+ C ++ E+I N M + P V +Y+I+INGLCK +++ A++ F QM
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
+ P++VTY++++ + K G + DA EL+ + + PP +ITY+S++D L K +
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 382
A+ L +M GI P+ T L+ G C+ +++A +V ++ +G + TY ++I
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496
Query: 383 NGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
GLCK + A+ ++ M GC P+ Y I+ + + G +A
Sbjct: 497 QGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 191/391 (48%), Gaps = 18/391 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +N +L K H TA+ L + M PD+ T+N +I C G A
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ + G P IT Y+ +++ +C+ A + +M +
Sbjct: 232 WKDQLQNGCPPFMIT------------------YTVLVELVCRYCGSARAIEVLEDMAVE 273
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
PD+VTY +L++ C G L+E ++ ++ + + T++ L+ +LC E
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ +L +M + P V+TY+ L++G C +++A D F M + PD+ +Y+ ++
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
+ K MVDDA+ L + P ++TY+S+IDGL K G + A EL ++M G+ P+
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
IT SL+ C+ + V+ A ++K+ ++G TY +++ GLCK ++ A EV +
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
+L G D YT ++ G+ + G+ EA+
Sbjct: 514 IMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 186/357 (52%), Gaps = 4/357 (1%)
Query: 88 GKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK 147
G + + D + I+ +LC + + DA L M P + + L+ G + QL
Sbjct: 97 GPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLD 156
Query: 148 EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
+A+ +L MV+ PD T+++++ LCK+G ++ A +L M G PDV+TY++++
Sbjct: 157 KAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVI 216
Query: 208 DGYCLVNEVNKAEDI--FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
C+ + N + I + + P + +Y++++ +C+ A+ + + M E
Sbjct: 217 R--CMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEG 274
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
P++VTY+SL++ C+ G + + ++ + S GL N +TY++LL +LC + + D
Sbjct: 275 CYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVE 334
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
++ M P V TY IL++GLCK L A + F +L + D+ TY ++ +
Sbjct: 335 EILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAM 394
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
K+G+ D+A+ L+ +++ C P +TY +I L +KG KA +L QM+ G+
Sbjct: 395 SKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 208/449 (46%), Gaps = 19/449 (4%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N+ +L A L + M +P + + L+ + Q+ A +L +
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
G PDTIT+N II +LCK + A L +M PDV
Sbjct: 168 SGGVPDTITYNMII------------------GNLCKKGHIRTALVLLEDMSLSGSPPDV 209
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
+TY T+I G ++A+ + P + T+++LV+ +C+ A VL
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M G PD+VTY+SL++ C + + + + L + +Y+ +++ LC +
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
D+ + M+ + P V+TY+ LI+GLCK+ +S A + +M + P+++TY++
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
+L A+ K VD+AI L+ +K+ P + TY ++DGL K G +K A E++ +L G
Sbjct: 390 VLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449
Query: 371 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
D T +I G C+ L +EA ++ + + G TY ++I L +K + + A
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 431 KLLRQMIARGLLTG-LFYATEFEAVEELS 458
+++ M+ G Y + VEE+
Sbjct: 510 EVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 4/301 (1%)
Query: 146 LKEAVGLLNQMVLKSINP----DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
L+ V + Q L S P D T + ++ LC GK+ +A ++ VM + + P
Sbjct: 81 LRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFP 140
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
+ S+L+ G +++++KA I M PD +Y+++I LCK + AL L + M
Sbjct: 141 SCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM 200
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
P+V+TY+++I + G A + G PP +ITY+ L++ +C+
Sbjct: 201 SLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGS 260
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
AI +++ M +G P++ TY L++ C+ G L++ V Q +L G L+ TY +
Sbjct: 261 ARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTL 320
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ LC +DE +++ M P +TY I+I L + +A QM+ +
Sbjct: 321 LHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC 380
Query: 442 L 442
L
Sbjct: 381 L 381
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 218/436 (50%), Gaps = 17/436 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+PP FN + L + + L +MD ++ PD+ T ILIN C ++ A
Sbjct: 294 APP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM-L 122
V + RG + D G + + D + ++T+ID LCK + +A L M L
Sbjct: 351 VFEQM--RGKRTD----------DGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
+R P+ VTY LI G+C G+L+ A ++++M I P+V T + +V +C+ +
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
A M K G K +VVTY +L+ C V+ V KA + M +PD + Y +I
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
+GLC+++ DA+ + +++ + +++ Y+ LI C +E++ +M G
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P+ ITY++L+ K+ ++ ++++M+ G+ P V TY ++D C G L +A ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 363 FQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
F+D+ L N + Y I+IN K G F +AL+L +M+ PN TY + L
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLN 698
Query: 422 QKGDNDKAEKLLRQMI 437
+K + KL+ +M+
Sbjct: 699 EKTQGETLLKLMDEMV 714
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 212/432 (49%), Gaps = 44/432 (10%)
Query: 46 NILINCYCHLGQITSAFSVLCNIFKRG--YQPDTITFNTII------------------- 84
N++++ G + AF VL + ++ + P+ IT + ++
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 85 KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
+ P+ V + I SLCK+ N A+++ S+++ + + + L+S C+
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGR 306
Query: 145 QLKEAVGLLNQMVLK----SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE---- 196
+ + +N +VLK I PDV T IL++ LCK +V EA V M +G
Sbjct: 307 NMD--ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM-RGKRTDDG 363
Query: 197 ---KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL----APDVQSYSIMINGLCKIK 249
K D + +++L+DG C V + +AE++ + RM+L P+ +Y+ +I+G C+
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEEL---LVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
++ A + +M + I PNVVT ++++ G+C+ ++ A +M G+ NV+TY
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+L+ A C +V+ A+ +KM G P+ Y L+ GLC+ R DA V + L
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G++LD+ Y ++I C ++ +++ ME G P+++TY +I + D +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 430 EKLLRQMIARGL 441
E+++ QM GL
Sbjct: 601 ERMMEQMREDGL 612
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 243/488 (49%), Gaps = 52/488 (10%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ T K +A+ L +M+ P+ TF++LI + G++ A
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 67 NIFKRGYQPDTITFNTIIK--IQGKLAQ--------------PDVVMYSTIIDSLCKDKL 110
+ G P +TII+ ++G+ + +V + +TI+ LCK
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGK 458
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
++A L S+M ++ I P+VV+Y ++ G C + A + + ++ K + P+ YT+SI
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF-NTMTRM 229
L+D + + A V+ M + + V Y ++++G C V + +KA ++ N +
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
L SY+ +I+G K +D A+ +++M I+PNV+TY+SL++GLCK+ R+ A
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN--VY------ 341
E+ +EM ++G+ ++ Y +L+D CK ++++A +L ++ +G+ P+ +Y
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Query: 342 ---------------------------TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
TYT L+DGL K G L A E++ ++ G D
Sbjct: 699 FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
YT+++NGL K G F + + + +M+ N TPN + Y +I +++G+ D+A +L
Sbjct: 759 EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHD 818
Query: 435 QMIARGLL 442
+M+ +G+L
Sbjct: 819 EMLDKGIL 826
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 220/450 (48%), Gaps = 20/450 (4%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N+ ++LV+ A L +M V D T +L+ + A VL +
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 71 RGYQPDTITFNTIIKI------------------QGKLAQPDVVMYSTIIDSLCKDKLVN 112
RG +PD++ ++ ++ + KL P Y+++I + K ++
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
DA L EML+ IS +VV T+LI+G C L A+ L ++M + +P+ TFS+L+
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
+ K G++++A M G P V +++ G+ + +A +F+ LA
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
+V + +++ LCK D+A L +M + I PNVV+Y++++ G C+ + A +
Sbjct: 442 -NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
+ + +GL PN TYS L+D +NH NA+ ++ M I N Y +++GLCK
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 353 GGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
G+ A+E+ +++ K + +Y +I+G K+G D A+A +M NG +PN +
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 412 TYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
TY ++ L + D+A ++ +M +G+
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 200/392 (51%), Gaps = 18/392 (4%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N + L K A L +M+ R + P++ ++N ++ +C + A V NI +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 71 RGYQPDTITFNTII-------------KIQGKLAQPDV----VMYSTIIDSLCKDKLVND 113
+G +P+ T++ +I ++ + ++ V+Y TII+ LCK +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 114 AYNLYSEMLA-KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
A L + M+ KR+ ++Y ++I GF G++ AV +M I+P+V T++ L+
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
+ LCK ++ +A + M G K D+ Y +L+DG+C + + A +F+ + L
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
P Y+ +I+G + + AL+L+K+M + + ++ TY++LIDGL K G + A EL
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
EM + GL P+ I Y+ +++ L K + + ++MK + PNV Y ++ G +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
G L +A + ++L KG D T+ I+++G
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 177/345 (51%), Gaps = 2/345 (0%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
++ ++++ KD+ + A ++ ++ML + P +S L EA L ++MV
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
++ D T +L+ A +E K EA VL+ I+ G +PD + YS + C ++
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 218 KAEDIFNTMTRMEL-APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
A + M +L P ++Y+ +I K +DDA+ L +M ++ I+ NVV +SL
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I G CK+ + A L ++M G PN +T+S L++ KN ++ A+ KKM+ G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
P+V+ ++ G KG + ++A ++F + G +V +++ LCK G DEA
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATE 464
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
L+SKME G PN V+Y ++ ++ + D A + ++ +GL
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 153/301 (50%), Gaps = 18/301 (5%)
Query: 45 FNILINCYCHLGQITSAFSVLCN-IFKRGYQPDTITFNTII-----------------KI 86
+ +IN C +GQ + A +L N I ++ +++N+II ++
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 87 QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
G P+V+ Y+++++ LCK+ ++ A + EM K + D+ Y LI GFC +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
+ A L ++++ + +NP ++ L+ G + A ++ M+K G + D+ TY++L
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
+DG + A +++ M + L PD Y++++NGL K + +F++M N+
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 326
TPNV+ Y+++I G + G + +A+ L +EM +G+ P+ T+ L+ N A S
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAAS 850
Query: 327 L 327
L
Sbjct: 851 L 851
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 127/247 (51%), Gaps = 1/247 (0%)
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
++ L++ Y + + A DI N M +++ P + ++ L + + +A L+ +M
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+ + VT L+ + + ++A E+++ RG P+ + YS + A CK +
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 322 DNAISLIKKMKHQGI-LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
A SL+++MK + + +P+ TYT ++ K G + DA + ++L G +++V T
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS 344
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+I G CK+ AL L KME G +PN+VT+ ++I + G+ +KA + ++M G
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 441 LLTGLFY 447
L +F+
Sbjct: 405 LTPSVFH 411
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%)
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
+LV+ S G N ++ LL+A K+ D+A+ ++ +M ++P L L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
+ L +A+E++ ++ G + D T +++ ++ EAL ++S+ + G P++
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ Y + + A + D A LLR+M + L
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKL 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
N ++ L++ K + A ++VN+M + P + L AL + + + A L
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
+M G+ + T +L+ + + +A EV + +G D Y++ + CK
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281
Query: 389 GLFDEALALMSKMEDNG-CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFY 447
A +L+ +M++ C P+ TY +I A ++G+ D A +L +M++ G+ +
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341
Query: 448 ATEF 451
AT
Sbjct: 342 ATSL 345
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 205/437 (46%), Gaps = 18/437 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ +N K A + +++ + MP L TF +IN +C G ++ +
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLA-----------------QPDVVMYSTIIDSLCK 107
L + +RG + N II + + +PDV Y+ +I+ LCK
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ A E K + P+ ++Y LI +C + A LL QM + PD+ T
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ IL+ L G + +A N+ +I G PD Y+ LM G C A+ +F+ M
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ PD Y+ +I+G + D+A +F + + +VV ++++I G C+SG +
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+A +N M+ L P+ TYS+++D K + AI + + M+ PNV TYT L+
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD-GLFDEALALMSKMEDNGC 406
+G C G K A+E F+++ ++ +V TYT +I L K+ ++A+ M N C
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKC 657
Query: 407 TPNAVTYEIIIYALFQK 423
PN VT+ ++ +K
Sbjct: 658 VPNEVTFNCLLQGFVKK 674
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 206/432 (47%), Gaps = 18/432 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I N + LVK++ A + +M R D ++ IL+ C+ G++
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVE----- 222
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ I GK P++V Y+TII CK + +AY ++ E+ K
Sbjct: 223 -------------VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
P + T+ T+I+GFC G + LL+++ + + V+ + ++DA + G +
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ +I KPDV TY+ L++ C + A + ++ L P+ SY+ +I
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
CK K D A L QM P++VTY LI GL SG + DA + ++ RG+ P+
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
Y+ L+ LCK A L +M + ILP+ Y Y L+DG + G +A++VF
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+ KG +DV + MI G C+ G+ DEALA M++M + P+ TY II ++
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569
Query: 425 DNDKAEKLLRQM 436
D A K+ R M
Sbjct: 570 DMATAIKIFRYM 581
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 188/410 (45%), Gaps = 33/410 (8%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + + K+K Y A L QM R PD+ T+ ILI+ G + A ++
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
+ RG PD +N ++ K + PD +Y+T+ID +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
++A ++S + K + DVV + +I GFC G L EA+ +N+M + + PD +T
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+S ++D K+ + A + M K KP+VVTY+SL++G+C + AE+ F M
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 228 RMELAPDVQSYSIMINGLCK-IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS--- 283
+L P+V +Y+ +I L K ++ A+ ++ M T PN VT++ L+ G K
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSG 677
Query: 284 -----------GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
G+ S E + M S G + Y+S L LC + V A KM
Sbjct: 678 KVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEV-FQDLLIKGYNLDVRTYTIM 381
+G P+ ++ +L G C G K + + F +L KG + VR ++
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVL 787
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 230/457 (50%), Gaps = 22/457 (4%)
Query: 15 TSLV----KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
TSLV K A+ L +M+ + PD F++++ +C ++ A +
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVV----------------MYSTIIDSLCKDKLVNDA 114
P ++ +T+I+ K P+ M + I CK V+ A
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAA 468
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
+ M K I P+VV Y ++ C + + A + ++M+ K + P+ +T+SIL+D
Sbjct: 469 TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 175 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF-NTMTRMELAP 233
K + A +V+ M + + V Y+++++G C V + +KA+++ N + +
Sbjct: 529 FFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM 588
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
SY+ +I+G K+ D A+ +++M +PNVVT++SLI+G CKS R+ A E+
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
+EM S L ++ Y +L+D CK + + A +L ++ G++PNV Y L+ G
Sbjct: 649 HEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNL 708
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G++ A ++++ ++ G + D+ TYT MI+GL KDG + A L S++ D G P+ + +
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILH 768
Query: 414 EIIIYALFQKGDNDKAEKLLRQMIARGLLTG-LFYAT 449
+++ L +KG KA K+L +M + + L Y+T
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYST 805
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 217/388 (55%), Gaps = 8/388 (2%)
Query: 61 AFSVLCN-IF----KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAY 115
A +CN IF K+G +F +++ +G +P+VV Y+ ++ + C+ K ++ A
Sbjct: 447 AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG--IEPNVVFYNNMMLAHCRMKNMDLAR 504
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
+++SEML K + P+ TY+ LI GF + A ++NQM + + ++ +++ L
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564
Query: 176 CKEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 234
CK G+ +AK +L +IK +Y+S++DG+ V + + A + + M+ +P+
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPN 624
Query: 235 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
V +++ +ING CK +D AL + +M + + ++ Y +LIDG CK + A+ L +
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFS 684
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
E+ GL PNV Y+SL+ +D AI L KKM + GI +++TYT ++DGL K G
Sbjct: 685 ELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Query: 355 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYE 414
+ A +++ +LL G D + +++NGL K G F +A ++ +M+ TPN + Y
Sbjct: 745 NINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYS 804
Query: 415 IIIYALFQKGDNDKAEKLLRQMIARGLL 442
+I ++G+ ++A +L +M+ +G++
Sbjct: 805 TVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 203/423 (47%), Gaps = 29/423 (6%)
Query: 37 RVMPDLFTFNI---------LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQ 87
RVM ++ F I L+N YC ++ A + + + G PD
Sbjct: 331 RVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDK---------- 380
Query: 88 GKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK 147
VM+S +++ CK+ + A Y M + RI+P V T+I G C+ +
Sbjct: 381 --------VMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESP 431
Query: 148 EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
EA + +S + + + CK+GKV A + L +M + G +P+VV Y+++M
Sbjct: 432 EAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 208 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
+C + ++ A IF+ M L P+ +YSI+I+G K K +A ++ QM+ N
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFE 551
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELV-NEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 326
N V Y+++I+GLCK G+ S A E++ N + + + +Y+S++D K D+A+
Sbjct: 552 ANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVE 611
Query: 327 LIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 386
++M G PNV T+T L++G CK R+ A E+ ++ LD+ Y +I+G C
Sbjct: 612 TYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFC 671
Query: 387 KDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
K A L S++ + G PN Y +I G D A L ++M+ G+ LF
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 447 YAT 449
T
Sbjct: 732 TYT 734
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 211/414 (50%), Gaps = 19/414 (4%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
NK F K A S + M+ + + P++ +N ++ +C + + A S+ + +
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
+G +P+ T YS +ID K+K +A+++ ++M A +
Sbjct: 513 KGLEPNNFT------------------YSILIDGFFKNKDEQNAWDVINQMNASNFEANE 554
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVL-KSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V Y T+I+G C VGQ +A +L ++ K + +++ ++D K G A
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M + G+ P+VVT++SL++G+C N ++ A ++ + M MEL D+ +Y +I+G CK
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ A LF ++ + PNV Y+SLI G G++ A +L +M + G+ ++ TY+
Sbjct: 675 DMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+++D L K+ +++ A L ++ GI+P+ + +L++GL K G+ A ++ +++ K
Sbjct: 735 TMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+V Y+ +I G ++G +EA L +M + G + + +++ +K
Sbjct: 795 DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 209/467 (44%), Gaps = 54/467 (11%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
FN + ++ K A+ M R+V+P + N +++ I A + +
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
G D +T +++ + +P+ +A ++ ++++ PD
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPE------------------EAVKIFRRVMSRGAEPD 273
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTFSILVDALCKEGKVKEAKNVL 188
+ ++ + C L A+ LL +M K + T++ ++ A KEG ++EA V+
Sbjct: 274 GLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVM 333
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
M+ G V+ +SL++GYC NE+ KA D+FN M LAPD +S+M+ CK
Sbjct: 334 DEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN 393
Query: 249 KMVDDALNLFKQMHTENITPNVVTYSSLIDG----------------------------- 279
++ A+ + +M + I P+ V ++I G
Sbjct: 394 MEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCN 453
Query: 280 -----LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
CK G++ A + M +G+ PNV+ Y++++ A C+ ++D A S+ +M +
Sbjct: 454 KIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
G+ PN +TY+IL+DG K ++A +V + + + Y +INGLCK G +A
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 395 LALMSKM-EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
++ + ++ + + +Y II + GD D A + R+M G
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 196/381 (51%), Gaps = 19/381 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ +N + + K+ A S+ +M + + P+ FT++ILI+ + +A+ V
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML-A 123
+ + ++ + V+Y+TII+ LCK + A + ++
Sbjct: 542 INQMNASNFEANE------------------VIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
KR S +Y ++I GF VG AV +M +P+V TF+ L++ CK ++
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A + M K D+ Y +L+DG+C N++ A +F+ + + L P+V Y+ +I+
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
G + +D A++L+K+M + I+ ++ TY+++IDGL K G I+ A +L +E+ G+ P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+ I + L++ L K A ++++MK + + PNV Y+ ++ G + G L +A +
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLH 823
Query: 364 QDLLIKGYNLDVRTYTIMING 384
++L KG D + ++++G
Sbjct: 824 DEMLEKGIVHDDTVFNLLVSG 844
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 102/213 (47%), Gaps = 3/213 (1%)
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
EL P ++++ ++N + K +D A++ F M + P V ++++ L +S I +A
Sbjct: 166 ELTP--RAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
E+ N+M G+ + +T L+ A + + A+ + +++ +G P+ +++ +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 350 LCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
CK L A ++ +++ K G TYT +I K+G +EA+ +M +M G
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 409 NAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ + ++ + + KA L +M GL
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 150/241 (62%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+ DVV+ + I+D LCKD +A NL++EM K I P+V+TY +I FC G+ +A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
LL M+ K INPD+ TFS L++A KE KV EA+ + M++ P +TY+S++DG+C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+ V+ A+ + ++M +PDV ++S +ING CK K VD+ + +F +MH I N V
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY++LI G C+ G + A +L+NEM S G+ P+ IT+ +L LC + A ++++ +
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 332 K 332
+
Sbjct: 247 Q 247
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 140/246 (56%)
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M I DVV T ++ C G A L +M K I P+V T++ ++D+ C G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+A +L MI+ PD+VT+S+L++ + +V++AE+I+ M R + P +Y+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
MI+G CK VDDA + M ++ +P+VVT+S+LI+G CK+ R+ + E+ EMH RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+ N +TY++L+ C+ +D A L+ +M G+ P+ T+ +L GLC L+ A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 361 EVFQDL 366
+ +DL
Sbjct: 241 AILEDL 246
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 140/242 (57%)
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
I DV + +VD LCK+G A+N+ M + G P+V+TY+ ++D +C + A+
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+ M ++ PD+ ++S +IN K + V +A ++K+M +I P +TY+S+IDG
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
CK R+ DA +++ M S+G P+V+T+S+L++ CK VDN + + +M +GI+ N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
TYT L+ G C+ G L AQ++ +++ G D T+ M+ GLC +A A++
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 401 ME 402
++
Sbjct: 246 LQ 247
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%)
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M + + DV + +++ LCK +A NLF +MH + I PNV+TY+ +ID C SGR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
SDA +L+ M + + P+++T+S+L++A K V A + K+M I P TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
++DG CK R+ DA+ + + KG + DV T++ +ING CK D + + +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
N VTY +I+ Q GD D A+ LL +MI+ G+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 132/240 (55%)
Query: 197 KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN 256
K DVV ++++D C A+++F M + P+V +Y+ MI+ C DA
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 257 LFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 316
L + M + I P++VT+S+LI+ K ++S+A E+ EM + P ITY+S++D C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 317 KNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 376
K VD+A ++ M +G P+V T++ L++G CK R+ + E+F ++ +G +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 377 TYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
TYT +I+G C+ G D A L+++M G P+ +T+ ++ L K + KA +L +
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 122/231 (52%), Gaps = 17/231 (7%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPD 76
L K ++ A +L +M + + P++ T+N +I+ +CH G+ + A +L ++ ++ PD
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 77 TITFNTIIKI---QGKLAQ--------------PDVVMYSTIIDSLCKDKLVNDAYNLYS 119
+TF+ +I + K+++ P + Y+++ID CK V+DA +
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 120 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG 179
M +K SPDVVT++TLI+G+C ++ + + +M + I + T++ L+ C+ G
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
+ A+++L MI G PD +T+ ++ G C E+ KA I + + E
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ +N S + ++ A L + M +++ PD+ TF+ LIN + +++ A +
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
+ + P TIT+N++I + K PDVV +ST+I+ CK
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K V++ ++ EM + I + VTYTTLI GFC VG L A LLN+M+ + PD T
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Query: 168 FSILVDALCKEGKVKEAKNVL 188
F ++ LC + ++++A +L
Sbjct: 223 FHCMLAGLCSKKELRKAFAIL 243
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 101/183 (55%)
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
M +I +VV ++++D LCK G +A L EMH +G+ PNV+TY+ ++D+ C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
+A L++ M + I P++ T++ L++ K ++ +A+E+++++L TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
MI+G CK D+A ++ M GC+P+ VT+ +I + D ++ +M RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 441 LLT 443
++
Sbjct: 181 IVA 183
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +N K A + M + PD+ TF+ LIN YC ++ + +
Sbjct: 113 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
C + +RG +T+T Y+T+I C+ ++ A +L +EM++
Sbjct: 173 FCEMHRRGIVANTVT------------------YTTLIHGFCQVGDLDAAQDLLNEMISC 214
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
++PD +T+ +++G C +L++A +L +
Sbjct: 215 GVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 219/440 (49%), Gaps = 30/440 (6%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKL-------------- 90
F++L+ C C L + A + ++G+ P T T N I+ + +L
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 91 ---AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK 147
+ +V ++ +I+ LCK+ + A M I P +VTY TL+ GF + G+++
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 148 EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
A ++++M K PD+ T++ ++ +C EG+ E VL M + G PD V+Y+ L+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILI 334
Query: 208 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
G ++ A + M + + P +Y+ +I+GL ++ A L +++ + I
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 327
+ VTY+ LI+G C+ G A+ L +EM + G+ P TY+SL+ LC+ + A L
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 328 IKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 387
+K+ +G+ P++ L+DG C G + A + +++ + N D TY ++ GLC
Sbjct: 455 FEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG------- 440
+G F+EA LM +M+ G P+ ++Y +I +KGD A + +M++ G
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 441 ---LLTGLFYATEFEAVEEL 457
LL GL E E EEL
Sbjct: 575 YNALLKGLSKNQEGELAEEL 594
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 187/365 (51%), Gaps = 24/365 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ +N A + +M + PD+ T+N +++ C+ G+ A V
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEV 314
Query: 65 LCNIFKRGYQPDTITFNTIIK-------------------IQGKLAQPDVVMYSTIIDSL 105
L + + G PD++++N +I+ QG + P Y+T+I L
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV--PTFYTYNTLIHGL 372
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
+ + A L E+ K I D VTY LI+G+C G K+A L ++M+ I P
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
+T++ L+ LC++ K +EA + ++ G KPD+V ++LMDG+C + +++A +
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M M + PD +Y+ ++ GLC ++A L +M I P+ ++Y++LI G K G
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
A+ + +EM S G P ++TY++LL L KN + A L+++MK +GI+PN ++
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612
Query: 346 LLDGL 350
+++ +
Sbjct: 613 VIEAM 617
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 195/394 (49%), Gaps = 32/394 (8%)
Query: 80 FNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG 139
F+ ++ +L +++ ++ C+ ++V++A + M K P T +++
Sbjct: 140 FDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTL 199
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
+ +++ A M I +VYTF+I+++ LCKEGK+K+AK L +M G KP
Sbjct: 200 LSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPT 259
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC------------- 246
+VTY++L+ G+ L + A I + M PD+Q+Y+ +++ +C
Sbjct: 260 IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMK 319
Query: 247 KIKMVDD-------------------ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+I +V D A +M + + P TY++LI GL +I
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
A L+ E+ +G+ + +TY+ L++ C++ A +L +M GI P +TYT L+
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
LC+ + ++A E+F+ ++ KG D+ +++G C G D A +L+ +M+
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
P+ VTY ++ L +G ++A +L+ +M RG+
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 226/455 (49%), Gaps = 47/455 (10%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKR------GYQPDTIT 79
A+ + QM V PD+FT +I++N YC G + A +F + G + + +T
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-----VFAKETESSLGLELNVVT 263
Query: 80 FNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG 139
+N++I Y+ I D V + M + +S +VVTYT+LI G
Sbjct: 264 YNSLIN-----------GYAMIGD-------VEGMTRVLRLMSERGVSRNVVTYTSLIKG 305
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
+C G ++EA + + K + D + + +L+D C+ G++++A V MI+ G + +
Sbjct: 306 YCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTN 365
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
+SL++GYC ++ +AE IF+ M L PD +Y+ +++G C+ VD+AL L
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCD 425
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
QM + + P V+TY+ L+ G + G D L M RG+ + I+ S+LL+AL K
Sbjct: 426 QMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLG 485
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
+ A+ L + + +G+L + T +++ GLCK ++ +A+E+ ++ I V+TY
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ 545
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
+ +G K G EA A+ ME G P Y +I F+ +K L+ ++ AR
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 440 G----------LLTGL--------FYATEFEAVEE 456
G L+TG YAT FE +E+
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 210/474 (44%), Gaps = 57/474 (12%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N + + A+ L QM + V+P + T+NIL+ Y +G S+ +
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
KRG D I+ ST++++L K N+A L+ +LA+ + D
Sbjct: 464 KRGVNADEISC------------------STLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
+T +ISG C + ++ EA +L+ + + P V T+ L K G +KEA V
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M + G P + Y++L+ G +NK D+ + L P V +Y +I G C I
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV---------------- 293
M+D A +M + IT NV S + + L + +I +A L+
Sbjct: 626 MIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSL 685
Query: 294 ----------------------NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
N + L PN I Y+ + LCK +++A L +
Sbjct: 686 KEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 332 -KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
+P+ YTYTIL+ G G + A + ++ +KG ++ TY +I GLCK G
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
D A L+ K+ G TPNA+TY +I L + G+ +A +L +MI +GL+ G
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 214/463 (46%), Gaps = 56/463 (12%)
Query: 36 RRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ--- 92
++++ D + +L++ YC GQI A V N+ + G + +T N++I K Q
Sbjct: 325 KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 93 --------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
PD Y+T++D C+ V++A L +M K + P V+TY L+
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
G+ +G + + L M+ + +N D + S L++AL K G EA + ++ G
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
D +T + ++ G C + +VN+A++I + + P VQ+Y + +G K+ + +A +
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVK 564
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
+ M + I P + Y++LI G K ++ +LV E+ +RGL P V TY +L+ C
Sbjct: 565 EYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 624
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ-----DLLIKGYN- 372
+D A + +M +GI NV + + + L + ++ +A + Q DLL+ GY
Sbjct: 625 GMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQS 684
Query: 373 ----LDVRT----------------------------YTIMINGLCKDGLFDEALALMSK 400
L+ Y + I GLCK G ++A L S
Sbjct: 685 LKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSD 744
Query: 401 M-EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+ + P+ TY I+I+ GD +KA L +M +G++
Sbjct: 745 LLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII 787
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 204/419 (48%), Gaps = 17/419 (4%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK--------------- 85
++ T+N LIN Y +G + VL + +RG + +T+ ++IK
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 86 --IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV 143
++ K D MY ++D C+ + DA ++ M+ + + +LI+G+C
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 144 GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
GQL EA + ++M S+ PD +T++ LVD C+ G V EA + M + P V+TY
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTY 439
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+ L+ GY + + ++ M + + D S S ++ L K+ ++A+ L++ +
Sbjct: 440 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
+ + +T + +I GLCK ++++A E+++ ++ P V TY +L K ++
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
A ++ + M+ +GI P + Y L+ G K L ++ +L +G V TY +I
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
G C G+ D+A A +M + G T N I +LF+ D+A LL++++ LL
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLL 678
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 214/416 (51%), Gaps = 8/416 (1%)
Query: 30 SQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGK 89
S+Q FR PD + +++ S LC + + + + ++++ +
Sbjct: 95 SKQQKFR---PDYKAYCKMVHILSRARNYQQTKSYLCELVALNHS-GFVVWGELVRVFKE 150
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
+ V + I+ + LV +A +++ M P +++ +L+S G+ A
Sbjct: 151 FSFSPTV-FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVA 209
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG--GEKPDVVTYSSLM 207
+ + +QM+ ++PDV+T SI+V+A C+ G V +A V A + G + +VVTY+SL+
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLI 268
Query: 208 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
+GY ++ +V + M+ ++ +V +Y+ +I G CK ++++A ++F+ + + +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 327
+ Y L+DG C++G+I DA + + M G+ N +SL++ CK+ + A +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 328 IKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 387
+M + P+ +TY L+DG C+ G + +A ++ + K V TY I++ G +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
G F + L+L M G + ++ ++ ALF+ GD ++A KL ++ARGLLT
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 196/393 (49%), Gaps = 39/393 (9%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVL-- 65
I + +L K + A+ L + + R ++ D T N++I+ C + ++ A +L
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 66 CNIFK-----RGYQPDTITFNTIIKIQGKLAQ----------PDVVMYSTIIDSLCKDKL 110
NIF+ + YQ + + + ++ A P + MY+T+I K +
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRH 591
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+N +L E+ A+ ++P V TY LI+G+C +G + +A +M+ K I +V S
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSK 651
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA----------- 219
+ ++L + K+ EA +L +V + L+ GY + E +A
Sbjct: 652 IANSLFRLDKIDEACLLL---------QKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 702
Query: 220 -EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPNVVTYSSLI 277
E + N+ + L P+ Y++ I GLCK ++DA LF + ++ P+ TY+ LI
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
G +G I+ A+ L +EM +G+ PN++TY++L+ LCK +VD A L+ K+ +GI
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
PN TY L+DGL K G + +A + + ++ KG
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 56/350 (16%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
I N + L K + A + ++ R P + T+ L + Y +G + AF+V
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 68 IFKRGYQPDTITFNT-----------------IIKIQGKLAQPDVVMYSTIIDSLCKDKL 110
+ ++G P +NT +I+++ + P V Y +I C +
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 111 VNDAYNLYSEMLAKRISPDV--------------------------VTYTTLISGFCIVG 144
++ AY EM+ K I+ +V V + L+ G+ +
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 145 QLKEAVG---LLNQMVLKSIN---------PDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
+ EA L Q + +S+ P+ +++ + LCK GK+++A+ + + ++
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 193 KGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
PD TY+ L+ G + ++NKA + + M + P++ +Y+ +I GLCK+ V
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
D A L ++ + ITPN +TY++LIDGL KSG +++A L +M +GL
Sbjct: 807 DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 237/538 (44%), Gaps = 107/538 (19%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLF---------TFNILINC 51
++ P ++ N LV+ Y ++ S+S R V D+ TFN+L+N
Sbjct: 160 LKLKPNLLTCNTLLIGLVR---YPSSFSISSA---REVFDDMVKIGVSLNVQTFNVLVNG 213
Query: 52 YCHLGQITSAFSVLCNIFKR-GYQPDTITFNTIIKI---QGKLAQ--------------P 93
YC G++ A +L + PD +T+NTI+K +G+L+ P
Sbjct: 214 YCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVP 273
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+ V Y+ ++ CK + +A+ + M + PD+ TY LI+G C G ++E + L+
Sbjct: 274 NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333
Query: 154 NQMVLKSINPDVYTFSILVDA-----------------------------------LCKE 178
+ M + PDV T++ L+D LCKE
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKE 393
Query: 179 GKVKEA--KNVLAVMIKGGEKPDVVTYSSLMDGY-------------------------- 210
K +EA + V ++ G PD+VTY +L+ Y
Sbjct: 394 EK-REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 211 ---------CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
C ++++A ++ N+ + D +Y +I G + + V+ AL ++ +M
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
ITP V T++SLI GLC G+ A E +E+ GL P+ T++S++ CK V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
+ A + P+ YT ILL+GLCK G + A F + LI+ +D TY M
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF-NTLIEEREVDTVTYNTM 631
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
I+ CKD EA L+S+ME+ G P+ TY I L + G + ++LL++ +
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 215/399 (53%), Gaps = 17/399 (4%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
P F+I ++ Y H G+ A + + + +P+ +T NT++ +V Y
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL--------IGLVRYP 180
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
+ ++ A ++ +M+ +S +V T+ L++G+C+ G+L++A+G+L +MV +
Sbjct: 181 SSFS-------ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 160 -SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
+NPD T++ ++ A+ K+G++ + K +L M K G P+ VTY++L+ GYC + + +
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
A I M + + PD+ +Y+I+INGLC + + L L M + + P+VVTY++LID
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGIL 337
G + G +A +L+ +M + G+ N +T++ L LCK + +K++ G
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
P++ TY L+ K G L A E+ +++ KG ++ T +++ LCK+ DEA L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
++ G + VTY +I F++ +KA ++ +M
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 160/279 (57%), Gaps = 4/279 (1%)
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG---YCLVNEVNKA 219
P F I + A EGK A + MI+ KP+++T ++L+ G Y ++ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLID 278
++F+ M ++ ++ +VQ++++++NG C ++DAL + ++M +E + P+ VTY++++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
+ K GR+SD EL+ +M GL PN +TY++L+ CK + A +++ MK +LP
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
++ TY IL++GLC G +++ E+ + DV TY +I+G + GL EA LM
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 399 SKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
+ME++G N VT+ I + L ++ + + +++++
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 172/360 (47%), Gaps = 30/360 (8%)
Query: 21 KHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITF 80
K A + + +D PD+ T++ LI Y +G ++ A ++ + ++G + +TIT
Sbjct: 395 KREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 81 NTIIKI---QGKLAQP--------------DVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
NTI+ + KL + D V Y T+I +++ V A ++ EM
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+I+P V T+ +LI G C G+ + A+ +++ + PD TF+ ++ CKEG+V++
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A IK KPD T + L++G C KA + FNT+ E D +Y+ MI+
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMIS 633
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
CK K + +A +L +M + + P+ TY+S I L + G++S+ EL+ +
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK-------- 685
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+S ++ ++ V+ + + + Y+ ++D LC GRLK+ +
Sbjct: 686 ----FSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSY 741
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 215/422 (50%), Gaps = 20/422 (4%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII---------------- 84
D+ + L+N G+ A S+ + + G++P IT+ T++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 85 -KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV 143
K++ +PD ++++ II++ + ++ A ++ +M P T+ TLI G+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 144 GQLKEAVGLLNQMVLKS-INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
G+L+E+ LL+ M+ + P+ T +ILV A C + K++EA N++ M G KPDVVT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 203 YSSLMDGYCLVNEVNKAED-IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
+++L Y + AED I M ++ P+V++ ++NG C+ +++AL F +M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+ PN+ ++SLI G + E+V+ M G+ P+V+T+S+L++A +
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
+ M GI P+++ ++IL G + G + A+++ + G +V YT +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 382 INGLCKDGLFDEALALMSKMED-NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
I+G C G +A+ + KM G +PN TYE +I+ + KAE+LL+ M +
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKN 737
Query: 441 LL 442
++
Sbjct: 738 VV 739
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 197/401 (49%), Gaps = 20/401 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I + T+L + KH+ + +SL +++ + PD FN +IN G + A +
Sbjct: 352 PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLA------------------QPDVVMYSTIIDSLC 106
+ + G +P TFNT+IK GK+ QP+ + ++ + C
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL-LNQMVLKSINPDV 165
+ + +A+N+ +M + + PDVVT+ TL + +G A + + +M+ + P+V
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
T +V+ C+EGK++EA M + G P++ ++SL+ G+ +N+++ ++ +
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M + PDV ++S ++N + + ++ M I P++ +S L G ++G
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPNVYTYT 344
A +++N+M G+ PNV+ Y+ ++ C + A+ + KKM G+ PN+ TY
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYE 711
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
L+ G + + A+E+ +D+ K +T ++ +G
Sbjct: 712 TLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 39/289 (13%)
Query: 177 KEGKVKEAKNVLAVMIKGGEK-PDVVTYSSLMDGYCLVNEVNKAEDIFNT---------- 225
+EG+V + ++ V+ GG DV + + LM+G +A IFNT
Sbjct: 296 EEGRV-QLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSL 354
Query: 226 ---------MTRME----------------LAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
+TR + L PD ++ +IN + +D A+ +F++
Sbjct: 355 ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNH 319
M P T+++LI G K G++ ++ L++ M L PN T + L+ A C
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE-VFQDLLIKGYNLDVRTY 378
++ A +++ KM+ G+ P+V T+ L + G A++ + +L +VRT
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDND 427
++NG C++G +EAL +M++ G PN + +I D D
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 201/357 (56%), Gaps = 15/357 (4%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+PD+V ++ ID LCK + +A ++ ++ IS D V+ +++I GFC VG+ +EA+
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK 362
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
L++ L+ P+++ +S + +C G + A + + + G PD V Y++++DGYC
Sbjct: 363 LIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYC 419
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+ +KA F + + P + + +I+I + + DA ++F+ M TE + +VV
Sbjct: 420 NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY++L+ G K+ +++ +EL++EM S G+ P+V TY+ L+ ++ ++D A +I ++
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVF------QDLLIKGYNLDVRTYTIMINGL 385
+G +P+ +T ++ G K G D QE F DL +K DV T + +++G
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILWFYMADLRMKP---DVVTCSALLHGY 593
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
CK ++A+ L +K+ D G P+ V Y +I+ GD +KA +L+ M+ RG+L
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 27/390 (6%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
F+K + L+ KHY + PD+ F + I+ C G + A SVL +
Sbjct: 287 FDKGWELLMGMKHYG-------------IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 70 KRGYQPDTITFNTIIK--------------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAY 115
G D+++ +++I I +P++ +YS+ + ++C + A
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
++ E+ + PD V YTT+I G+C +G+ +A ++ P + T +IL+ A
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC 453
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
+ G + +A++V M G K DVVTY++LM GY +++NK ++ + M ++PDV
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
+Y+I+I+ + +D+A + ++ P+ + ++ +I G K G +A+ L
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M + P+V+T S+LL CK ++ AI L K+ G+ P+V Y L+ G C G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
++ A E+ ++ +G + T+ ++ GL
Sbjct: 634 IEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 172/346 (49%), Gaps = 3/346 (0%)
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
++S +ID +++ VN A L ++ I P +L+ V L+ A + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+ + + + S+ + C +G + +L M G +PD+V ++ +D C +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+A + + ++ D S S +I+G CK+ ++A+ L +H+ + PN+ YSS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSF 379
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
+ +C +G + A + E+ GL P+ + Y++++D C D A + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
P++ T TIL+ + G + DA+ VF+++ +G LDV TY +++G K ++
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
L+ +M G +P+ TY I+I+++ +G D+A +++ ++I RG +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 163/315 (51%), Gaps = 18/315 (5%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
R P I ++ F +++ T A ++ Q++ ++PD + +I+ YC+LG+
Sbjct: 367 FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
AF + K G P ++T +TI +I + + ++DA +++
Sbjct: 427 AFQYFGALLKSG-NPPSLTTSTI-----------------LIGACSRFGSISDAESVFRN 468
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M + + DVVTY L+ G+ QL + L+++M I+PDV T++IL+ ++ G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+ EA +++ +I+ G P + ++ ++ G+ + +A ++ M + + PDV + S
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
+++G CK + ++ A+ LF ++ + P+VV Y++LI G C G I A EL+ M RG
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 301 LPPNVITYSSLLDAL 315
+ PN T+ +L+ L
Sbjct: 649 MLPNESTHHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 201/357 (56%), Gaps = 15/357 (4%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+PD+V ++ ID LCK + +A ++ ++ IS D V+ +++I GFC VG+ +EA+
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK 362
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
L++ L+ P+++ +S + +C G + A + + + G PD V Y++++DGYC
Sbjct: 363 LIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYC 419
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+ +KA F + + P + + +I+I + + DA ++F+ M TE + +VV
Sbjct: 420 NLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY++L+ G K+ +++ +EL++EM S G+ P+V TY+ L+ ++ ++D A +I ++
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVF------QDLLIKGYNLDVRTYTIMINGL 385
+G +P+ +T ++ G K G D QE F DL +K DV T + +++G
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILWFYMADLRMKP---DVVTCSALLHGY 593
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
CK ++A+ L +K+ D G P+ V Y +I+ GD +KA +L+ M+ RG+L
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 27/390 (6%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
F+K + L+ KHY + PD+ F + I+ C G + A SVL +
Sbjct: 287 FDKGWELLMGMKHYG-------------IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 70 KRGYQPDTITFNTIIK--------------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAY 115
G D+++ +++I I +P++ +YS+ + ++C + A
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
++ E+ + PD V YTT+I G+C +G+ +A ++ P + T +IL+ A
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC 453
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
+ G + +A++V M G K DVVTY++LM GY +++NK ++ + M ++PDV
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
+Y+I+I+ + +D+A + ++ P+ + ++ +I G K G +A+ L
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M + P+V+T S+LL CK ++ AI L K+ G+ P+V Y L+ G C G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
++ A E+ ++ +G + T+ ++ GL
Sbjct: 634 IEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 172/346 (49%), Gaps = 3/346 (0%)
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
++S +ID +++ VN A L ++ I P +L+ V L+ A + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+ + + + S+ + C +G + +L M G +PD+V ++ +D C +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+A + + ++ D S S +I+G CK+ ++A+ L +H+ + PN+ YSS
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSF 379
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
+ +C +G + A + E+ GL P+ + Y++++D C D A + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
P++ T TIL+ + G + DA+ VF+++ +G LDV TY +++G K ++
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
L+ +M G +P+ TY I+I+++ +G D+A +++ ++I RG +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 163/315 (51%), Gaps = 18/315 (5%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
R P I ++ F +++ T A ++ Q++ ++PD + +I+ YC+LG+
Sbjct: 367 FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
AF + K G P ++T +TI +I + + ++DA +++
Sbjct: 427 AFQYFGALLKSG-NPPSLTTSTI-----------------LIGACSRFGSISDAESVFRN 468
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M + + DVVTY L+ G+ QL + L+++M I+PDV T++IL+ ++ G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+ EA +++ +I+ G P + ++ ++ G+ + +A ++ M + + PDV + S
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
+++G CK + ++ A+ LF ++ + P+VV Y++LI G C G I A EL+ M RG
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 301 LPPNVITYSSLLDAL 315
+ PN T+ +L+ L
Sbjct: 649 MLPNESTHHALVLGL 663
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 191 bits (485), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 222/442 (50%), Gaps = 26/442 (5%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQ---ITS 60
SP ++ ++ +L + K + A+S+ Q R+ P T+N +I GQ +
Sbjct: 161 SPAVL--SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
++ +CN + PDTIT++ +I KL + D A L+ E
Sbjct: 219 VYTEMCN--EGDCFPDTITYSALISSYEKLGRND------------------SAIRLFDE 258
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M + P YTTL+ + VG++++A+ L +M +P VYT++ L+ L K G+
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
V EA M++ G PDVV ++LM+ V V + ++F+ M P V SY+
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 241 MINGLCKIKM-VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+I L + K V + + F +M ++++P+ TYS LIDG CK+ R+ A L+ EM +
Sbjct: 379 VIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
G PP Y SL++AL K + A L K++K + Y +++ K G+L +A
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 360 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
++F ++ +G DV Y +++G+ K G+ +EA +L+ KME+NGC + ++ II+
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNG 558
Query: 420 LFQKGDNDKAEKLLRQMIARGL 441
+ G +A ++ + G+
Sbjct: 559 FARTGVPRRAIEMFETIKHSGI 580
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 200/401 (49%), Gaps = 22/401 (5%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ------- 92
PD T++ LI+ Y LG+ SA + + QP + T++ I K+ +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 93 ----------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
P V Y+ +I L K V++AY Y +ML ++PDVV L++
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCK-EGKVKEAKNVLAVMIKGGEKPDVV 201
VG+++E + ++M + P V +++ ++ AL + + V E + M P
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
TYS L+DGYC N V KA + M P +Y +IN L K K + A LFK++
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 262 HTE--NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
N++ V Y+ +I K G++S+A +L NEM ++G P+V Y++L+ + K
Sbjct: 471 KENFGNVSSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
++ A SL++KM+ G ++ ++ I+L+G + G + A E+F+ + G D TY
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
++ G+F+EA +M +M+D G +A+TY I+ A+
Sbjct: 589 TLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 180/369 (48%), Gaps = 22/369 (5%)
Query: 12 KFFTSLV----KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
K +T+L+ K A+ L ++M P ++T+ LI G++ A+ +
Sbjct: 269 KIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKD 328
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKL 110
+ + G PD + N ++ I GK+ + P VV Y+T+I +L + K
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 111 -VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
V++ + + +M A +SP TY+ LI G+C ++++A+ LL +M K P +
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L++AL K + + A + + + Y+ ++ + ++++A D+FN M
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
PDV +Y+ +++G+ K M+++A +L ++M ++ +++ +++G ++G A
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
E+ + G+ P+ +TY++LL + A ++++MK +G + TY+ +LD
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 350 LCKGGRLKD 358
+ KD
Sbjct: 629 VGNVDHEKD 637
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 18/275 (6%)
Query: 2 RPSPPIIEFNKFFTSLVKTK-HYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
R +P ++ +N +L ++K H + S +M V P FT++ILI+ YC ++
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVV-----------------MYSTIID 103
A +L + ++G+ P + ++I GK + + +Y+ +I
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
K +++A +L++EM + PDV Y L+SG G + EA LL +M
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D+ + +I+++ + G + A + + G KPD VTY++L+ + +A +
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
M D +YS +++ + + D ++ F
Sbjct: 608 REMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR---GLPPNVITYSSLLDALCKNHHV 321
N + TY +LI L ++ + + + E+ + P V+ S L+ AL + V
Sbjct: 121 NFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVL--SELVKALGRAKMV 178
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTI 380
A+S+ + K + P TY ++ L + G+ + EV+ ++ +G D TY+
Sbjct: 179 SKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+I+ K G D A+ L +M+DN P Y ++ F+ G +KA L +M G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 441 LLTGLFYATEF 451
++ TE
Sbjct: 299 CSPTVYTYTEL 309
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 199/397 (50%), Gaps = 22/397 (5%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
FN K + A ++ +M + P T+NI I C G+I A +L ++
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM- 369
Query: 70 KRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVN 112
PD +++NT++ K+ + P +V Y+T+ID LC+ +
Sbjct: 370 ---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
A L EM + I PDV+TYTTL+ GF G L A + ++M+ K I PD Y ++
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEK-PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
+ G +A + M+ PD+ Y+ +DG C V + KA + + R+ L
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
PD +Y+ +I G + A NL+ +M + + P+V+TY LI G K+GR+ A++
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
EM RG+ PNV+T+++LL +CK ++D A + KM+ +GI PN Y+YT+L+ C
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 352 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
+ ++ ++++++L K D T+ + L KD
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 209/423 (49%), Gaps = 20/423 (4%)
Query: 34 DFRR----VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII----- 84
D RR V P ++FN LI YC G A+ V + G P T T+N I
Sbjct: 298 DMRRSGFAVTP--YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 85 --------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTL 136
++ +A PDVV Y+T++ K +A L+ ++ A I P +VTY TL
Sbjct: 356 FGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 137 ISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE 196
I G C G L+ A L +M + I PDV T++ LV K G + A V M++ G
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 197 KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL-APDVQSYSIMINGLCKIKMVDDAL 255
KPD Y++ G + + +KA + M + APD+ Y++ I+GLCK+ + A+
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
+++ + P+ VTY+++I G ++G+ A L +EM + L P+VITY L+
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
K ++ A +MK +G+ PNV T+ LL G+CK G + +A + +G +
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
+YT++I+ C ++E + L +M D P+ T+ + L + ++ + E L R
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERL 715
Query: 436 MIA 438
+++
Sbjct: 716 LLS 718
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 210/429 (48%), Gaps = 49/429 (11%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII------------- 84
+MP + TFN +++ G + + + +R + +T+N +I
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 85 KIQGKLAQPDVVM----YSTIIDSLCKDKLVNDA------------------YNLY---- 118
+ G + + + ++ +I+ CK L +DA YN+Y
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 119 ---------SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
E+L+ +PDVV+Y TL+ G+ +G+ EA L + + I+P + T++
Sbjct: 354 CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L+D LC+ G ++ A+ + M PDV+TY++L+ G+ ++ A ++++ M R
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPNVVTYSSLIDGLCKSGRISD 288
+ PD +Y+ G ++ D A L ++M T++ P++ Y+ IDGLCK G +
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A E ++ GL P+ +TY++++ +N A +L +M + + P+V TY +L+
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
G K GRL+ A + ++ +G +V T+ ++ G+CK G DEA + KME+ G P
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPP 653
Query: 409 NAVTYEIII 417
N +Y ++I
Sbjct: 654 NKYSYTMLI 662
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 239/487 (49%), Gaps = 64/487 (13%)
Query: 31 QQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII------ 84
++M + +P + NI++ + A +V + + G P ITFNT++
Sbjct: 192 EKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKA 251
Query: 85 -------KIQGKLAQPDV----VMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTY 133
KI ++ + ++ V Y+ +I+ K+ + +A + +M + ++
Sbjct: 252 GDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSF 311
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
LI G+C G +A G+ ++M+ I P T++I + ALC G++ +A+ +L+ M
Sbjct: 312 NPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA- 370
Query: 194 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
PDVV+Y++LM GY + + +A +F+ + ++ P + +Y+ +I+GLC+ ++
Sbjct: 371 ---APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEG 427
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS--- 310
A L ++M T+ I P+V+TY++L+ G K+G +S A E+ +EM +G+ P+ Y++
Sbjct: 428 AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAV 487
Query: 311 ---------------------------------LLDALCKNHHVDNAISLIKKMKHQGIL 337
+D LCK ++ AI +K+ G++
Sbjct: 488 GELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLV 547
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
P+ TYT ++ G + G+ K A+ ++ ++L K V TY ++I G K G ++A
Sbjct: 548 PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQY 607
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT-------E 450
++M+ G PN +T+ ++Y + + G+ D+A + L +M G+ + T +
Sbjct: 608 STEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCD 667
Query: 451 FEAVEEL 457
FE EE+
Sbjct: 668 FEKWEEV 674
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%)
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K M + L F++M + P+V + ++ L S ++ A + M G+ P VI
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
T++++LD+ K ++ + +MK + I + TY IL++G K G++++A+ D+
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
G+ + ++ +I G CK GLFD+A + +M + G P TY I I AL G
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 427 DKAEKLLRQMIA 438
D A +LL M A
Sbjct: 360 DDARELLSSMAA 371
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + +N L K + AI +++ ++PD T+ +I Y GQ A +
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 64 VLCNIFKRGYQPDTITFNTII---KIQGKLAQ--------------PDVVMYSTIIDSLC 106
+ + ++ P IT+ +I G+L Q P+V+ ++ ++ +C
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 631
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K +++AY +M + I P+ +YT LIS C + +E V L +M+ K I PD Y
Sbjct: 632 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 691
Query: 167 TFSILVDALCKEGKVKEAK 185
T L L K+ + +E +
Sbjct: 692 THRALFKHLEKDHESREVE 710
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 211/424 (49%), Gaps = 38/424 (8%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDS 104
FN LI Y + G + + + + G P +TFN+++ I
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSI------------------ 182
Query: 105 LCKDKLVNDAYNLYSEMLAKR---ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI 161
L K A++L+ EM +R ++PD T+ TLI+GFC + EA + M L
Sbjct: 183 LLKRGRTGMAHDLFDEM--RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE--KPDVVTYSSLMDGYCLVNEVNKA 219
NPDV T++ ++D LC+ GKVK A NVL+ M+K P+VV+Y++L+ GYC+ E+++A
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA 300
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT--PNVVTYSSLI 277
+F+ M L P+ +Y+ +I GL + D+ ++ + T P+ T++ LI
Sbjct: 301 VLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILI 360
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
C +G + A ++ EM + L P+ +YS L+ LC + D A +L ++ + +L
Sbjct: 361 KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 338 -------PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
P Y + + LC G+ K A++VF+ L+ +G D +Y +I G C++G
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGK 479
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYATE 450
F A L+ M P+ TYE++I L + G+ A L++M+ L AT
Sbjct: 480 FKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLP---VATT 536
Query: 451 FEAV 454
F +V
Sbjct: 537 FHSV 540
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 220/461 (47%), Gaps = 45/461 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRR---VMPDLFTFNILINCYCHLGQITS 60
SP ++ FN + L+K A L +M RR V PD +TFN LIN +C +
Sbjct: 170 SPSVLTFNSLLSILLKRGRTGMAHDLFDEM--RRTYGVTPDSYTFNTLINGFCKNSMVDE 227
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
AF IFK D ++ PDVV Y+TIID LC+ V A+N+ S
Sbjct: 228 AF----RIFK-----DMELYH---------CNPDVVTYNTIIDGLCRAGKVKIAHNVLSG 269
Query: 121 MLAKR--ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKE 178
ML K + P+VV+YTTL+ G+C+ ++ EAV + + M+ + + P+ T++ L+ L +
Sbjct: 270 MLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEA 329
Query: 179 GKVKEAKNVLAVMIKGGEK-----PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
+ E K++L I G + PD T++ L+ +C ++ A +F M M+L P
Sbjct: 330 HRYDEIKDIL---IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENI-------TPNVVTYSSLIDGLCKSGRI 286
D SYS++I LC D A LF ++ + + P Y+ + + LC +G+
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKT 446
Query: 287 SDAWELVNEMHSRGL--PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
A ++ ++ RG+ PP +Y +L+ C+ A L+ M + +P++ TY
Sbjct: 447 KQAEKVFRQLMKRGVQDPP---SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
+L+DGL K G A + Q +L Y T+ ++ L K +E+ L++ M +
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
N ++ LF +KA ++R + G L +
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKM 604
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 213/464 (45%), Gaps = 38/464 (8%)
Query: 4 SPPIIEFNKFFTSL-----VKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQI 58
+P ++ +N L VK H + L + D V P++ ++ L+ YC +I
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD---VHPNVVSYTTLVRGYCMKQEI 297
Query: 59 TSAFSVLCNIFKRGYQPDTITFNTIIK---------------IQGKLA----QPDVVMYS 99
A V ++ RG +P+ +T+NT+IK I G A PD ++
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFN 357
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
+I + C ++ A ++ EML ++ PD +Y+ LI C+ + A L N++ K
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 160 SI-------NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+ P ++ + + LC GK K+A+ V ++K G + D +Y +L+ G+C
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCR 476
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ A ++ M R E PD+++Y ++I+GL KI A + ++M + P T
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
+ S++ L K ++++ LV M + + N+ + ++ L + + A +++ +
Sbjct: 537 FHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY 596
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
G L + LL LC+ +L DA + L K +D+ T +I GLCK
Sbjct: 597 DNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHS 653
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
EA +L +++ + G + ++ AL G ++ + + ++M
Sbjct: 654 EAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRM 697
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 175/338 (51%), Gaps = 9/338 (2%)
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
D+ ++ +M P Y T+++ QL A M + P V + ++L+
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 173 DALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
ALC+ +G V + M K G PD TY +L+ G C +++A+ +F M +
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
AP V +Y+ +INGLC K VD+A+ ++M ++ I PNV TYSSL+DGLCK GR A E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
L M +RG PN++TY++L+ LCK + A+ L+ +M QG+ P+ Y ++ G C
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 352 KGGRLKDAQEVFQDLLIKG-------YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
+ ++A ++++ G +N+ V+T ++ GLC + A L M
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSR 402
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
G + T E ++ L +KG+ KA +L+ +++ G +
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 173/339 (51%), Gaps = 27/339 (7%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYC-HLGQITSAFSVLCNIFKRGYQP 75
LV+ A + M + P + + N+LI C + G + + + + KRG P
Sbjct: 131 LVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP 190
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
D+ T Y T+I LC+ +++A L++EM+ K +P VVTYT+
Sbjct: 191 DSYT------------------YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
LI+G C + EA+ L +M K I P+V+T+S L+D LCK+G+ +A + +M+ G
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
+P++VTY++L+ G C ++ +A ++ + M L PD Y +I+G C I +A
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 256 NLFKQMHTENITPNVVTY-------SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 308
N +M ITPN +T+ + ++ GLC + S A+ L M SRG+ V T
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETL 411
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
SL+ LCK A+ L+ ++ G +P+ T+ +L+
Sbjct: 412 ESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 132/273 (48%), Gaps = 36/273 (13%)
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
S+ GY V+ + +F+ M + P ++Y ++ L + ++ A +K M
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI 150
Query: 265 NITPNVVTYSSLI------------------------------------DGLCKSGRISD 288
+ P V + + LI GLC+ GRI +
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A +L EM + P V+TY+SL++ LC + +VD A+ +++MK +GI PNV+TY+ L+D
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
GLCK GR A E+F+ ++ +G ++ TYT +I GLCK+ EA+ L+ +M G P
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 409 NAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+A Y +I +A L +MI G+
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 122/274 (44%), Gaps = 47/274 (17%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P ++ + L +K+ A+ ++M + + P++FT++ L++ C G+ A
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ + RG +P+ +T Y+T+I LCK++ + +A L M
Sbjct: 284 LFEMMMARGCRPNMVT------------------YTTLITGLCKEQKIQEAVELLDRMNL 325
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ + PD Y +ISGFC + + +EA L++M+L I P+ T++I
Sbjct: 326 QGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI------------- 372
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
V T + ++ G C N ++A ++ +M ++ +V++ ++
Sbjct: 373 ---------------HVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVK 416
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
LCK A+ L ++ T+ P+ T+ LI
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 6/237 (2%)
Query: 215 EVNKAEDIFNTMTRMELA----PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
+V K+ +F++ T E A D S+ M+ L A +L +M EN +
Sbjct: 28 DVEKSMAVFDSAT-AEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSE 86
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
S+ G + R D+ + ++M P+ Y ++L L + + ++ A K
Sbjct: 87 DILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN 146
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQ-EVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
M+ G+ P V + +L+ LC+ DA ++F ++ +G + D TY +I+GLC+ G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
DEA L ++M + C P VTY +I L + D+A + L +M ++G+ +F
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 154/280 (55%), Gaps = 1/280 (0%)
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
Y L+S G ++E L +M+ ++PD+YTF+ LV+ CK G V EAK + +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
+ G PD TY+S + G+C EV+ A +F MT+ + SY+ +I GL + K +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
+AL+L +M +N PNV TY+ LID LC SG+ S+A L +M G+ P+ Y+ L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 372
+ C +D A L++ M G++PNV TY L+ G CK + A + +L +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Query: 373 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
D+ TY +I G C G D A L+S ME++G PN T
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 151/295 (51%), Gaps = 19/295 (6%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N +SL + L +M V PD++TFN L+N YC LG + A + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+ G PD T Y++ I C+ K V+ A+ ++ EM +
Sbjct: 183 QAGCDPDYFT------------------YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRN 224
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V+YT LI G ++ EA+ LL +M + P+V T+++L+DALC G+ EA N+
Sbjct: 225 EVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFK 284
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M + G KPD Y+ L+ +C + +++A + M L P+V +Y+ +I G CK K
Sbjct: 285 QMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-K 343
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
V A+ L +M +N+ P+++TY++LI G C SG + A+ L++ M GL PN
Sbjct: 344 NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 147/272 (54%), Gaps = 1/272 (0%)
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
L+ +L + G V+E K + M++ PD+ T+++L++GYC + V +A+ + +
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
PD +Y+ I G C+ K VD A +FK+M N V+Y+ LI GL ++ +I +A
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
L+ +M PNV TY+ L+DALC + A++L K+M GI P+ YT+L+
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
C G L +A + + +L G +V TY +I G CK + +A+ L+SKM + P+
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLVPDL 364
Query: 411 VTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+TY +I G+ D A +LL M GL+
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 140/280 (50%), Gaps = 36/280 (12%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y+ ++ SL + LV + LY+EML +SPD+ T+ TL++G+C +G + EA + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK-------------------- 197
+PD +T++ + C+ +V A V M + G
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 198 ---------------PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
P+V TY+ L+D C + ++A ++F M+ + PD Y+++I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
C +D+A L + M + PNV+TY++LI G CK + A L+++M + L
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
P++ITY++L+ C + ++D+A L+ M+ G++PN T
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 125/243 (51%), Gaps = 1/243 (0%)
Query: 203 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
Y++L+ V + + ++ M ++PD+ +++ ++NG CK+ V +A +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
P+ TY+S I G C+ + A+++ EM G N ++Y+ L+ L + +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 382
A+SL+ KMK PNV TYT+L+D LC G+ +A +F+ + G D YT++I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 383 NGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
C DEA L+ M +NG PN +TY +I F K + KA LL +M+ + L+
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG-FCKKNVHKAMGLLSKMLEQNLV 361
Query: 443 TGL 445
L
Sbjct: 362 PDL 364
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 18/251 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP I FN K + A + PD FT+ I +C ++ +AF
Sbjct: 152 SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFK 211
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
V + + G + +++ +I K++ P+V Y+ +ID+LC
Sbjct: 212 VFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC 271
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
++A NL+ +M I PD YT LI FC L EA GLL M+ + P+V
Sbjct: 272 GSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ L+ CK+ V +A +L+ M++ PD++TY++L+ G C ++ A + + M
Sbjct: 332 TYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLM 390
Query: 227 TRMELAPDVQS 237
L P+ ++
Sbjct: 391 EESGLVPNQRT 401
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 60/237 (25%)
Query: 265 NITPNVVTYSSLI---------------------------DGL-----CKSGRISDAWE- 291
N NV +Y+SL+ D L C++ R D++E
Sbjct: 55 NFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEI 114
Query: 292 ---------------------------LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
L EM + P++ T+++L++ CK +V A
Sbjct: 115 KYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEA 174
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
+ + G P+ +TYT + G C+ + A +VF+++ G + + +YT +I G
Sbjct: 175 KQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYG 234
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
L + DEAL+L+ KM+D+ C PN TY ++I AL G +A L +QM G+
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGI 291
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 216/444 (48%), Gaps = 17/444 (3%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP I+ +N ++ + A+ L QM + PD+FT+ L++ + G++ SA S
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLC 106
+ + G +P+ TFN IK+ G + PD+V ++T++
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
++ + ++ ++ EM P+ T+ TLIS + G ++A+ + +M+ + PD+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ ++ AL + G ++++ VLA M G KP+ +TY SL+ Y E+ + +
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ P ++ K ++ +A F ++ +P++ T +S++ + +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+ A +++ M RG P++ TY+SL+ ++ + +++++ +GI P++ +Y +
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+ C+ R++DA +F ++ G DV TY I D +F+EA+ ++ M +GC
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 407 TPNAVTYEIIIYALFQKGDNDKAE 430
PN TY I+ + D+A+
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 215/432 (49%), Gaps = 19/432 (4%)
Query: 28 SLSQQMDFRRVMPDLFTFNILINCYCHLGQI-TSAFSVLCNIFKRGYQPDTITFNTIIKI 86
SL ++M + PD +T+N LI C C G + A V + G+ D +T+N ++ +
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 87 QGKLAQP-----------------DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
GK +P +V Y+++I + +D ++++A L ++M K PD
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V TYTTL+SGF G+++ A+ + +M P++ TF+ + GK E +
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
+ G PD+VT+++L+ + ++ +F M R P+ ++++ +I+ +
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ A+ ++++M +TP++ TY++++ L + G + +++ EM PN +TY
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
SLL A + SL +++ I P L+ K L +A+ F +L +
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G++ D+ T M++ + + +A ++ M++ G TP+ TY ++Y + D K+
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 430 EKLLRQMIARGL 441
E++LR+++A+G+
Sbjct: 684 EEILREILAKGI 695
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 191/397 (48%), Gaps = 53/397 (13%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA--------- 91
D++++ LI+ + + G+ A +V + + G +P IT+N I+ + GK+
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 92 ---------QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
PD Y+T+I + L +A ++ EM A S D VTY L+ +
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
+ KEA+ +LN+MVL +P + T++ L+ A ++G + EA + M + G KPDV T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 203 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
Y++L+ G+ +V A IF M N CK
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMR---------------NAGCK--------------- 416
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
PN+ T+++ I G+ ++ ++ +E++ GL P+++T+++LL +N
Sbjct: 417 -----PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 382
+ K+MK G +P T+ L+ + G + A V++ +L G D+ TY ++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 383 NGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
L + G+++++ ++++MED C PN +TY +++A
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 186/368 (50%), Gaps = 1/368 (0%)
Query: 79 TFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
F+ +K + + D + + II L K+ V+ A N+++ + S DV +YT+LIS
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK-VKEAKNVLAVMIKGGEK 197
F G+ +EAV + +M P + T++++++ K G + +++ M G
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
PD TY++L+ + +A +F M + D +Y+ +++ K +A+ +
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
+M +P++VTY+SLI + G + +A EL N+M +G P+V TY++LL +
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
V++A+S+ ++M++ G PN+ T+ + G+ + ++F ++ + G + D+ T
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
+ ++ ++G+ E + +M+ G P T+ +I A + G ++A + R+M+
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 438 ARGLLTGL 445
G+ L
Sbjct: 517 DAGVTPDL 524
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/489 (20%), Positives = 204/489 (41%), Gaps = 52/489 (10%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P +N T + + A + ++M D T+N L++ Y + A
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
VL + G+ P +T+N++I ++ K +PDV Y+T++
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ V A +++ EM P++ T+ I + G+ E + + +++ + ++PD+
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIV 455
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T++ L+ + G E V M + G P+ T+++L+ Y +A ++ M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ PD+ +Y+ ++ L + M + + + +M PN +TY SL+ I
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 287 S-----------------------------------DAWELVNEMHSRGLPPNVITYSSL 311
+A +E+ RG P++ T +S+
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+ + V A ++ MK +G P++ TY L+ + ++E+ +++L KG
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEK 431
D+ +Y +I C++ +A + S+M ++G P+ +TY I + ++A
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 432 LLRQMIARG 440
++R MI G
Sbjct: 756 VVRYMIKHG 764
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 155/347 (44%), Gaps = 17/347 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP I+ +N + + + ++M +P+ TFN LI+ Y G A +
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
V + G PD T+NT++ +++ +P+ + Y +++ +
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K + ++L E+ + I P V TL+ L EA +++ + +PD+
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T + +V + V +A VL M + G P + TY+SLM + + K+E+I +
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ PD+ SY+ +I C+ + DA +F +M I P+V+TY++ I
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+A +V M G PN TY+S++D CK + D A ++ +++
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 122/241 (50%), Gaps = 2/241 (0%)
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+A D F + D +I+I+ L K V A N+F + + + +V +Y+SLI
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI-SLIKKMKHQGI 336
SGR +A + +M G P +ITY+ +L+ K N I SL++KMK GI
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
P+ YTY L+ +G ++A +VF+++ G++ D TY +++ K EA+
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF-YATEFEAVE 455
++++M NG +P+ VTY +I A + G D+A +L QM +G +F Y T E
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 456 E 456
Sbjct: 396 R 396
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D V Y+ D+L K V +A+ L EM + I PDV+ YTTLI G+C+ G++ +A+ L+
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
++M+ ++PD+ T+++LV L + G +E + M G KP+ VT S +++G C
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFA 506
Query: 214 NEVNKAEDIFNTM----------------------------TRMELAPDVQSYSIMINGL 245
+V +AED F+++ R+E Y + L
Sbjct: 507 RKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSL 566
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
C ++ A ++ K+M + P +I CK + +A L + M RGL P++
Sbjct: 567 CIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDL 626
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK-----------GG 354
TY+ ++ C+ + + A SL + MK +GI P+V TYT+LLD K G
Sbjct: 627 FTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQG 686
Query: 355 RL--KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
+ + A EV ++ G LDV YT++I+ CK ++A L +M D+G P+ V
Sbjct: 687 EVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVA 746
Query: 413 YEIIIYALFQKGDNDKAEKLLRQM 436
Y +I + F+KG D A L+ ++
Sbjct: 747 YTTLISSYFRKGYIDMAVTLVTEL 770
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 209/451 (46%), Gaps = 42/451 (9%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI---QGKLAQPDVVM 97
D+ N L+N G+I ++ + + G + T+ ++K +G L + +++
Sbjct: 180 DIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL 239
Query: 98 --------YSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPD--VVTYTTLISGFCIVGQL 146
Y T I+ LC A L E++ ++ ++ D ++ GFC ++
Sbjct: 240 IENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKM 299
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
K A ++ +M DVY ++D CK + EA L M+ G K + V S +
Sbjct: 300 KAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLI 359
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
+ YC ++ +A + F M + D Y++ + L K+ V++A L ++M I
Sbjct: 360 LQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI 419
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 326
P+V+ Y++LIDG C G++ DA +L++EM G+ P++ITY+ L+ L +N H + +
Sbjct: 420 VPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 327 LIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL----------LIKGY---NL 373
+ ++MK +G PN T +++++GLC ++K+A++ F L +KGY L
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGL 539
Query: 374 DVRTYTIMIN---------------GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
+ Y + LC +G ++A ++ KM P +I
Sbjct: 540 SKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIG 599
Query: 419 ALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
A + + +A+ L M+ RGL+ LF T
Sbjct: 600 AFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 192/399 (48%), Gaps = 38/399 (9%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N F +L K A L Q+M R ++PD+ + LI+ YC G++ A ++ +
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 70 KRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDKLVN 112
G PD IT+N ++ +++ + +P+ V S II+ LC + V
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
+A + +S + K P+ + + G+C G K+A ++ + VY L
Sbjct: 511 EAEDFFSSLEQK--CPE--NKASFVKGYCEAGLSKKAYKAFVRLEY-PLRKSVYI--KLF 563
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
+LC EG +++A +VL M +P ++ +C +N V +A+ +F+TM L
Sbjct: 564 FSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI 623
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK---------- 282
PD+ +Y+IMI+ C++ + A +LF+ M I P+VVTY+ L+D K
Sbjct: 624 PDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCS 683
Query: 283 -SGRIS--DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
G + A E++ E + G+ +V+ Y+ L+D CK ++++ A L +M G+ P+
Sbjct: 684 VQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 743
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
+ YT L+ + G + A + + L K YN+ ++
Sbjct: 744 MVAYTTLISSYFRKGYIDMAVTLVTE-LSKKYNIPSESF 781
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 185/438 (42%), Gaps = 85/438 (19%)
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDK---LVNDAYNL 117
A S L + + G P+ + T+++I D+ + S +++ + ++ V D +
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWG-LDIKLDSVLVELIKNEERGFTVMDLIEV 131
Query: 118 YSEMLAKRISPDVVTYTT--LISGFCIVGQLKEAVG-------------------LLNQM 156
E ++ V+ + L+ + +G EA L+N+M
Sbjct: 132 IGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRM 191
Query: 157 V--------------LKSIN--PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
LK + + YT++I+V ALC++G ++EA +L E V
Sbjct: 192 TEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLI------ENESV 245
Query: 201 VTYSSLMDGYCLVNEVNK--------------------------------------AEDI 222
Y + ++G C+ E K AE +
Sbjct: 246 FGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESV 305
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
M + DV + +I+ CK + +AL +M + + N V S ++ CK
Sbjct: 306 IIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK 365
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
+A E E + + + Y+ DAL K V+ A L+++MK +GI+P+V
Sbjct: 366 MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
YT L+DG C G++ DA ++ +++ G + D+ TY ++++GL ++G +E L + +M+
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 403 DNGCTPNAVTYEIIIYAL 420
G PNAVT +II L
Sbjct: 486 AEGPKPNAVTNSVIIEGL 503
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 175/336 (52%), Gaps = 19/336 (5%)
Query: 23 YATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNT 82
+ T SL +M R+ P TF I+ Y G+ A + N+ + G D +FNT
Sbjct: 107 HPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNT 166
Query: 83 IIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
I+ D LCK K V AY L+ L R S D VTY +++G+C+
Sbjct: 167 IL------------------DVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCL 207
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
+ + +A+ +L +MV + INP++ T++ ++ + G+++ A M K + DVVT
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 203 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
Y++++ G+ + E+ +A ++F+ M R + P V +Y+ MI LCK V++A+ +F++M
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
PNV TY+ LI GL +G S EL+ M + G PN TY+ ++ + V+
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
A+ L +KM LPN+ TY IL+ G+ R +D
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 186/380 (48%), Gaps = 3/380 (0%)
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
SVL ++ G P + F + + D + ID + L ++L M
Sbjct: 61 SVLKRLWNHG--PKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMR 118
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
+ RI P T+ + + G+ +AV L M D+ +F+ ++D LCK +V+
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVE 178
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
+A + + +G D VTY+ +++G+CL+ KA ++ M + P++ +Y+ M+
Sbjct: 179 KAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML 237
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
G + + A F +M + +VVTY++++ G +G I A + +EM G+
Sbjct: 238 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P+V TY++++ LCK +V+NA+ + ++M +G PNV TY +L+ GL G +E+
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL 357
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
Q + +G + +TY +MI + ++AL L KM C PN TY I+I +F
Sbjct: 358 MQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFV 417
Query: 423 KGDNDKAEKLLRQMIARGLL 442
+ ++ Q A+ +L
Sbjct: 418 RKRSEDMVVAGNQAFAKEIL 437
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%), Gaps = 11/246 (4%)
Query: 222 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
+ + M + + P ++++I+ D A+ LF MH ++ ++++++D LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY 341
KS R+ A+EL + R + +TY+ +L+ C A+ ++K+M +GI PN+
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 401
TY +L G + G+++ A E F ++ + +DV TYT +++G G A + +M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 402 EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG----------LLTGLFYATEF 451
G P+ TY +I L +K + + A + +M+ RG L+ GLF+A EF
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 452 EAVEEL 457
EEL
Sbjct: 352 SRGEEL 357
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%), Gaps = 18/252 (7%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R S + +N K A+ + ++M R + P+L T+N ++ + GQI A
Sbjct: 190 RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+ + KR + D +T+ T++ G + + A N++ EM
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE------------------IKRARNVFDEM 291
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ + + P V TY +I C ++ AV + +MV + P+V T+++L+ L G+
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
+ ++ M G +P+ TY+ ++ Y +EV KA +F M + P++ +Y+I+
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 242 INGLCKIKMVDD 253
I+G+ K +D
Sbjct: 412 ISGMFVRKRSED 423
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N L K + A+ + ++M R P++ T+N+LI H G+ + +
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL 357
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ + G +P+ T+N +I+ + ++ V A L+ +M +
Sbjct: 358 MQRMENEGCEPNFQTYNMMIRYYSECSE------------------VEKALGLFEKMGSG 399
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI 161
P++ TY LISG + + ++ V NQ K I
Sbjct: 400 DCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEI 436
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 233/510 (45%), Gaps = 81/510 (15%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N F +L K AI L ++M + + PD+ + LI C G+ + AF ++ +
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 70 KRGYQPDTITFN-----------------TIIKIQGKLAQPDVVMYSTIIDSLCKDKLVN 112
G PD + +N T+ ++ + +P V ++ +I+ L ++
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV---------------------- 150
A Y + K D +++ GFC G L A
Sbjct: 519 KAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSL 574
Query: 151 -----------GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
LL++M + P+ + L+ A C+ V++A+ +++ PD
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
+ TY+ +++ YC +NE +A +F M R ++ PDV +YS+++N D L++ +
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKR 687
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
+M ++ P+VV Y+ +I+ C + + L +M R + P+V+TY+ LL KN
Sbjct: 688 EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL----KNK 743
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
N L ++MK + P+V+ YT+L+D CK G L +A+ +F ++ G + D YT
Sbjct: 744 PERN---LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYT 800
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
+I CK G EA + +M ++G P+ V Y +I + G KA KL+++M+ +
Sbjct: 801 ALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Query: 440 GL------LTGLFYATEFEAVEELSAPGLR 463
G+ L+ + YA +L A GLR
Sbjct: 861 GIKPTKASLSAVHYA-------KLKAKGLR 883
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 202/439 (46%), Gaps = 33/439 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + ++ K + A+ + +M +R + + ++ CYC +G + A+
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAY-- 381
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
++FK ++ I+ D V Y+ D+L K V +A L+ EM K
Sbjct: 382 --DLFKE-FRETNISL-------------DRVCYNVAFDALGKLGKVEEAIELFREMTGK 425
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
I+PDV+ YTTLI G C+ G+ +A L+ +M PD+ +++L L G +EA
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
L +M G KP VT++ +++G E++KAE + ++ D M+ G
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKG 541
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC-KSGRISDAWELVNEMHSRGLPP 303
C +D A F + E P V Y +L LC + IS A +L++ M G+ P
Sbjct: 542 FCAAGCLDHAFERF--IRLEFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
Y L+ A C+ ++V A + + + I+P+++TYTI+++ C+ K A +F
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALF 658
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+D+ + DV TY++++N D L + +ME P+ V Y I+I
Sbjct: 659 EDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHL 711
Query: 424 GDNDKAEKLLRQMIARGLL 442
D K L + M R ++
Sbjct: 712 NDLKKVYALFKDMKRREIV 730
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 196/423 (46%), Gaps = 27/423 (6%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-------------KI 86
PD+ N LI+ G+ I + G D T+ ++ K+
Sbjct: 180 PDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKL 239
Query: 87 QGKL----AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV----VTYTTLIS 138
+L + V Y I+ LC +++ + AY L + I D + Y ++
Sbjct: 240 LSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVR 299
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
G C ++++A ++ M I+PDVY +S +++ K + +A +V M+K ++
Sbjct: 300 GLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRI 359
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
+ V SS++ YC + ++A D+F ++ D Y++ + L K+ V++A+ LF
Sbjct: 360 NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
++M + I P+V+ Y++LI G C G+ SDA++L+ EM G P+++ Y+ L L N
Sbjct: 420 REMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATN 479
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
A +K M+++G+ P T+ ++++GL G L A+ ++ L K D
Sbjct: 480 GLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS-- 537
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
M+ G C G D A ++E P +V + + +K KA+ LL +M
Sbjct: 538 --MVKGFCAAGCLDHAFERFIRLEFP--LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWK 593
Query: 439 RGL 441
G+
Sbjct: 594 LGV 596
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 198/454 (43%), Gaps = 43/454 (9%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+S ++++ +P + + +I C G + L + +RG + + ++K
Sbjct: 74 ALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLK 133
Query: 86 IQGKLAQPDVVMY---STIIDSLCKDKLVNDAYNLY-SEMLAKRISPDVVTYTTLISGFC 141
G++ Q V++ + ++ + + ++A +++ + +PD+ LIS
Sbjct: 134 AIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMI 193
Query: 142 IVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
G+ VG ++ ++ D +T+ ++V AL + +E + +L+ ++ + V
Sbjct: 194 ASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCV 253
Query: 202 TYSSLMDGYCLVN---------------------------------------EVNKAEDI 222
Y + ++G CL + AE +
Sbjct: 254 FYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESV 313
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
M + + PDV YS +I G K + A+++F +M + N V SS++ C+
Sbjct: 314 VLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQ 373
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
G S+A++L E + + + Y+ DAL K V+ AI L ++M +GI P+V
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
YT L+ G C G+ DA ++ ++ G D+ Y ++ GL +GL EA + ME
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+ G P VT+ ++I L G+ DKAE +
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 205/418 (49%), Gaps = 24/418 (5%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
P + T+ LIN Y +G+I+ A V + ++K +G + ++ YS
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEV----------------SRVMKEEG--VKHNLKTYS 523
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
+I+ K K +A+ ++ +M+ + + PDV+ Y +IS FC +G + A+ + +M
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
P TF ++ K G ++ + V +M + G P V T++ L++G ++ KA
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
+I + MT ++ + +Y+ ++ G + A F ++ E + ++ TY +L+
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
CKSGR+ A + EM +R +P N Y+ L+D + V A LI++MK +G+ P+
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
++TYT + K G + A + +++ G +++TYT +I G + L ++AL+
Sbjct: 764 IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYE 823
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAE------KLLRQMIARGLLTGLFYATEF 451
+M+ G P+ Y ++ +L + +A + ++M+ GL+ + A +
Sbjct: 824 EMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHW 881
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 211/469 (44%), Gaps = 31/469 (6%)
Query: 31 QQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKL 90
++M R + P + LI+ Y + A S + + + G + +T++ I+ K
Sbjct: 333 ERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKA 392
Query: 91 AQPDVV-----------------MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTY 133
+ +Y II + C+ + A L EM + I + Y
Sbjct: 393 GHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIY 452
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
T++ G+ +V K+ + + ++ P V T+ L++ K GK+ +A V VM +
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 194 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
G K ++ TYS +++G+ + + A +F M + + PDV Y+ +I+ C + +D
Sbjct: 513 EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDR 572
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
A+ K+M P T+ +I G KSG + + E+ + M G P V T++ L++
Sbjct: 573 AIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLIN 632
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
L + ++ A+ ++ +M G+ N +TYT ++ G G A E F L +G ++
Sbjct: 633 GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV 692
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
D+ TY ++ CK G ALA+ +M N+ Y I+I ++GD +A L+
Sbjct: 693 DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 434 RQMIARGLLTGLFYATEF--------------EAVEELSAPGLRSPVRV 468
+QM G+ + T F + +EE+ A G++ ++
Sbjct: 753 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 182/391 (46%), Gaps = 18/391 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P ++ + K + A+ +S+ M V +L T++++IN + L +AF+
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
V ++ K G +PD I +N II + C ++ A EM
Sbjct: 541 VFEDMVKEGMKPDVILYN------------------NIISAFCGMGNMDRAIQTVKEMQK 582
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
R P T+ +I G+ G ++ ++ + + M P V+TF+ L++ L ++ ++++
Sbjct: 583 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A +L M G + TY+ +M GY V + KA + F + L D+ +Y ++
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
CK + AL + K+M NI N Y+ LIDG + G + +A +L+ +M G+ P
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
++ TY+S + A K ++ A I++M+ G+ PN+ TYT L+ G + + A +
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCY 822
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
+++ G D Y ++ L EA
Sbjct: 823 EEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 179/402 (44%), Gaps = 35/402 (8%)
Query: 80 FNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG 139
+ +I K+++P + ++ + ++ A + M A+ I+P YT+LI
Sbjct: 294 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK-------EAKNV----- 187
+ + + EA+ + +M + I + T+S++V K G + EAK +
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413
Query: 188 -----------------------LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
+ M + G + Y ++MDGY +V + K +F
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
+ P V +Y +IN K+ + AL + + M E + N+ TYS +I+G K
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
++A+ + +M G+ P+VI Y++++ A C ++D AI +K+M+ P T+
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFM 593
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
++ G K G ++ + EVF + G V T+ +INGL + ++A+ ++ +M
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
G + N TY I+ GD KA + ++ GL +F
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 39 MPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMY 98
+P + TFN LIN Q+ A +L + G + T+ I +QG Y
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI--MQG---------Y 669
Query: 99 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
+++ D+ A+ ++ + + + D+ TY L+ C G+++ A+ + +M
Sbjct: 670 ASVGDT-------GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
++I + + ++IL+D + G V EA +++ M K G KPD+ TY+S + ++N+
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
A M + + P++++Y+ +I G + + + AL+ +++M I P+ Y L+
Sbjct: 783 ATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Query: 279 GLCKSGRISDAW------ELVNEMHSRGLPPNVITYSSLLDALCK 317
L I++A+ + EM GL ++ T LCK
Sbjct: 843 SLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCK 887
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%)
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
D W+ V + P+ + ++ + + A ++M+ +GI P YT L+
Sbjct: 292 DNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLI 351
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
G + +A + + +G + + TY++++ G K G + A + + T
Sbjct: 352 HAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT 411
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
NA Y IIYA Q + ++AE L+R+M G+
Sbjct: 412 LNASIYGKIIYAHCQTCNMERAEALVREMEEEGI 445
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 204/453 (45%), Gaps = 54/453 (11%)
Query: 43 FTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTII 102
T+N LI I A +++ + + GYQ D + ++ +I+ + + D VM +
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 103 DSLCKDKL------VND------------------------------------------- 113
+ +DKL VND
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 114 -----AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
A L+ E+ I P Y L+ G+ G LK+A ++++M + ++PD +T+
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
S+L+DA G+ + A+ VL M G +P+ +S L+ G+ E K + M
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 229 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
+ + PD Q Y+++I+ K +D A+ F +M +E I P+ VT+++LID CK GR
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A E+ M RG P TY+ ++++ D+ L+ KMK QGILPNV T+T L+D
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
K GR DA E +++ G Y +IN + GL ++A+ M +G P
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 409 NAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ + +I A + + +A +L+ M G+
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 191/406 (47%), Gaps = 18/406 (4%)
Query: 15 TSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQ 74
++L + A +L +++ + P +N L+ Y G + A S++ + KRG
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371
Query: 75 PDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYT 134
PD T YS +ID+ A + EM A + P+ ++
Sbjct: 372 PDEHT------------------YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFS 413
Query: 135 TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 194
L++GF G+ ++ +L +M + PD +++++D K + A M+
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G +PD VT+++L+D +C AE++F M R P +Y+IMIN + DD
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
L +M ++ I PNVVT+++L+D KSGR +DA E + EM S GL P+ Y++L++A
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
+ + A++ + M G+ P++ L++ + R +A V Q + G D
Sbjct: 594 YAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 653
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
V TYT ++ L + F + + +M +GC P+ ++ AL
Sbjct: 654 VVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 175/363 (48%), Gaps = 17/363 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +N VKT A S+ +M+ R V PD T+++LI+ Y + G+ SA V
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 65 LCNIFKRGYQPDTITFNTII---KIQGKL--------------AQPDVVMYSTIIDSLCK 107
L + QP++ F+ ++ + +G+ +PD Y+ +ID+ K
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
++ A + ML++ I PD VT+ TLI C G+ A + M + P T
Sbjct: 457 FNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++I++++ + + + K +L M G P+VVT+++L+D Y N A + M
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ L P Y+ +IN + + + A+N F+ M ++ + P+++ +SLI+ + R +
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+A+ ++ M G+ P+V+TY++L+ AL + + ++M G P+ ++L
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLR 696
Query: 348 DGL 350
L
Sbjct: 697 SAL 699
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 137/276 (49%), Gaps = 7/276 (2%)
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+SIL+ AL + K+ EA ++ + +TY++L+ N++ KA ++ M
Sbjct: 170 YSILIHALGRSEKLYEA-----FLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMR 224
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDA--LNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
+ D +YS++I L + +D L L+K++ + + +V + +I G KSG
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
S A +L+ + GL T S++ AL + A +L ++++ GI P Y
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
LL G K G LKDA+ + ++ +G + D TY+++I+ G ++ A ++ +ME
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
PN+ + ++ +G+ K ++L++M + G+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 17/229 (7%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII------------- 84
+ PD T+N LI+C+C G+ A + + +RG P T+N +I
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 85 KIQGKLAQ----PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF 140
++ GK+ P+VV ++T++D K NDA EM + + P Y LI+ +
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
G ++AV M + P + + L++A ++ + EA VL M + G KPDV
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
VTY++LM V++ K ++ M PD ++ S++ + L +K
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMK 703
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 184/345 (53%), Gaps = 20/345 (5%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
+ P++FT N+L+ C I SA+ VL I G P+ +T+ TI + G +A+ D
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTI--LGGYVARGD--- 241
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
+ A + EML + PD TYT L+ G+C +G+ EA +++ M
Sbjct: 242 -------------MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
I P+ T+ +++ ALCKE K EA+N+ M++ PD ++D C ++V+
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+A ++ M + PD S +I+ LCK V +A LF + +I P+++TY++LI
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLI 407
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
G+C+ G +++A L ++M+ R PN TY+ L++ L KN +V + ++++M G
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 382
PN T+ IL +GL K G+ +DA ++ ++ G +D ++ + +
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFL 511
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 173/313 (55%), Gaps = 1/313 (0%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P++ + ++ +LCK + AY + E+ + + P++VTYTT++ G+ G ++ A +
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L +M+ + PD T+++L+D CK G+ EA V+ M K +P+ VTY ++ C
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ +A ++F+ M PD +I+ LC+ VD+A L+++M N P+
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
S+LI LCK GR+++A +L +E +G P+++TY++L+ +C+ + A L M
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ PN +TY +L++GL K G +K+ V +++L G + T+ I+ GL K G +
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 393 EALALMSKMEDNG 405
+A+ ++S NG
Sbjct: 488 DAMKIVSMAVMNG 500
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 151/281 (53%), Gaps = 1/281 (0%)
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
I P+++T ++LV ALCK+ ++ A VL + G P++VTY++++ GY ++ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
+ + M PD +Y+++++G CK+ +A + M I PN VTY +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
LCK + +A + +EM R P+ ++DALC++H VD A L +KM +P+
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
+ L+ LCK GR+ +A+++F D KG + TY +I G+C+ G EA L
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
M + C PNA TY ++I L + G+ + ++L +M+ G
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 164/315 (52%), Gaps = 1/315 (0%)
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
I+P++ T L+ C ++ A +L+++ + P++ T++ ++ G ++ AK
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
VL M+ G PD TY+ LMDGYC + ++A + + M + E+ P+ +Y +MI L
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
CK K +A N+F +M + P+ +ID LC+ ++ +A L +M P+
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
S+L+ LCK V A L + + +G +P++ TY L+ G+C+ G L +A ++ D
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
+ + + TY ++I GL K+G E + ++ +M + GC PN T+ I+ L + G
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 426 NDKAEKLLRQMIARG 440
+ A K++ + G
Sbjct: 486 EEDAMKIVSMAVMNG 500
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 18/308 (5%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P I N +L K +A + ++ ++P+L T+ ++ Y G + SA
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLA-----------------QPDVVMYSTIIDSLC 106
VL + RG+ PD T+ ++ KL +P+ V Y +I +LC
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K+K +A N++ EML + PD +I C ++ EA GL +M+ + PD
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
S L+ LCKEG+V EA+ + KG P ++TY++L+ G C E+ +A +++ M
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDEFEKGS-IPSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ P+ +Y+++I GL K V + + + ++M PN T+ L +GL K G+
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Query: 287 SDAWELVN 294
DA ++V+
Sbjct: 487 EDAMKIVS 494
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 115/226 (50%)
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
N+ + P++ + ++++ LCK ++ A + ++ + + PN+VTY++++ G
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
G + A ++ EM RG P+ TY+ L+D CK A +++ M+ I PN TY
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
+++ LCK + +A+ +F ++L + + D +I+ LC+D DEA L KM
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
N C P+ +I+ L ++G +A KL + + + L Y T
Sbjct: 360 NNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNT 405
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P + + +L K K A ++ +M R MPD +I+ C ++ A
Sbjct: 293 EPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACG 352
Query: 64 VLCNIFKRGYQPDTITFNTIIKI---QGKLAQ-------------PDVVMYSTIIDSLCK 107
+ + K PD +T+I +G++ + P ++ Y+T+I +C+
Sbjct: 353 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCE 412
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +A L+ +M ++ P+ TY LI G G +KE V +L +M+ P+ T
Sbjct: 413 KGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTT 472
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGE 196
F IL + L K GK ++A ++++ + G+
Sbjct: 473 FLILFEGLQKLGKEEDAMKIVSMAVMNGK 501
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 231/486 (47%), Gaps = 45/486 (9%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
+I ++ S +K ++ + + ++ ++ DL NIL+ + +G A ++
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPD----------------VVMYSTIIDSLCKDKL 110
+ + PDT T+ T+IK K Q + V Y+ IID+LCK +
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGM 531
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
++ A + E+ K + D+ T TL+ G K +GL+ L+ +N DV +
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYG--LEQLNSDV-CLGM 588
Query: 171 LVDA---LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL-----------MDGYCLVNEV 216
L DA LCK G + A V +M + G VT+ S +D Y LV V
Sbjct: 589 LNDAILLLCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNLRSLDAYLLV--V 643
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
N E ++M DV Y+I+INGLCK + ALNL + +T N +TY+SL
Sbjct: 644 NAGETTLSSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSL 696
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I+GLC+ G + +A L + + + GL P+ +TY L+D LCK +A L+ M +G+
Sbjct: 697 INGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
+PN+ Y ++DG CK G+ +DA V ++ D T + MI G CK G +EAL+
Sbjct: 757 VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALS 816
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYATEFEAVEE 456
+ ++ +D + + + +I KG ++A LLR+M+ + L + E E
Sbjct: 817 VFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAES 876
Query: 457 LSAPGL 462
S G
Sbjct: 877 ESIRGF 882
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 228/486 (46%), Gaps = 61/486 (12%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
++ + K A+ ++M + + D+ +++ILI+ G + A +L +
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 70 KRGYQPDTITFNTIIK---IQGKLAQP--------------DVVMYSTIIDSLCKDKLVN 112
K G +P+ IT+ II+ GKL + D +Y T+ID +C+ +N
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
A+++ +M + I P ++TY T+I+G C+ G++ EA V K + DV T+S L+
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLL 419
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
D+ K + + ++ D+V + L+ + L+ +A+ ++ M M+L
Sbjct: 420 DSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
PD +Y+ MI G CK +++AL +F ++ +++ V Y+ +ID LCK G + A E+
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEV 538
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH--QGILPNVYTYTILLDGL 350
+ E+ +GL ++ T +LL ++ N + L+ ++ + + ILL L
Sbjct: 539 LIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL--L 596
Query: 351 CKGGRLKDAQEVFQDLLIKGY----------------------------------NLDVR 376
CK G + A EV+ + KG ++DV
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVI 656
Query: 377 TYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
YTI+INGLCK+G +AL L S + G T N +TY +I L Q+G +A +L +
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL 716
Query: 437 IARGLL 442
GL+
Sbjct: 717 ENIGLV 722
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 232/507 (45%), Gaps = 84/507 (16%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I + L K A L ++ + D F + LI+ C G + AFS+
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQP---------DVVMYSTIIDS-------- 104
L ++ +RG QP +T+NT+I + G++++ DV+ YST++DS
Sbjct: 370 LGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNID 429
Query: 105 -----------------------LCKDKLVNDAYN----LYSEMLAKRISPDVVTYTTLI 137
L K L+ AY LY M ++PD TY T+I
Sbjct: 430 AVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMI 489
Query: 138 SGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK 197
G+C GQ++EA+ + N++ S++ V ++ ++DALCK+G + A VL + + G
Sbjct: 490 KGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLY 548
Query: 198 PDVVTYSSLMDG-----------------------------------YCLVNEVNKAEDI 222
D+ T +L+ C A ++
Sbjct: 549 LDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEV 608
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
+ M R L S +I+ + ++ +D L + T + +V+ Y+ +I+GLCK
Sbjct: 609 YMIMRRKGLTVTFPS-TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCK 667
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
G + A L + SRG+ N ITY+SL++ LC+ + A+ L +++ G++P+ T
Sbjct: 668 EGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVT 727
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
Y IL+D LCK G DA+++ ++ KG ++ Y +++G CK G ++A+ ++S+
Sbjct: 728 YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM 787
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKA 429
TP+A T +I +KGD ++A
Sbjct: 788 MGRVTPDAFTVSSMIKGYCKKGDMEEA 814
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 197/389 (50%), Gaps = 24/389 (6%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
++P+L T+ L++ C LG++ ++ + G++ D + ++ I K
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFK-------- 254
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
++D+L +D+ EM+ K ++ DVV+Y+ LI G G ++EA+GLL +M+
Sbjct: 255 GGALVDALMQDR----------EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
+ + P++ T++ ++ LCK GK++EA + ++ G + D Y +L+DG C +N
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+A + M + + P + +Y+ +INGLC V +A + ++ + +V+TYS+L+
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLL 419
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
D K I E+ +P +++ + LL A A +L + M +
Sbjct: 420 DSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
P+ TY ++ G CK G++++A E+F +L + V Y +I+ LCK G+ D A +
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEV 538
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
+ ++ + G + T +++++ G +
Sbjct: 539 LIELWEKGLYLDIHTSRTLLHSIHANGGD 567
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/530 (24%), Positives = 241/530 (45%), Gaps = 97/530 (18%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + ++F L + + + + Q+D +++ + ++I+ + +L + A
Sbjct: 23 SPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEK 82
Query: 64 VL------CNIFKRGYQPDTITFNTIIK--------------IQGKLAQPDVVMYSTIID 103
+ +IF R + D++ I ++ A P + + ++I
Sbjct: 83 FINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIY 142
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISP--DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI 161
+ +++A + M K ++ D + +ISGFC +G+ + A+G V +
Sbjct: 143 RFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGV 202
Query: 162 -NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY----CLVNEV 216
P++ T++ LV ALC+ GKV E ++++ + G + D V YS+ + GY LV+ +
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDAL 262
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+ + M + DV SYSI+I+GL K V++AL L +M E + PN++TY+++
Sbjct: 263 MQDRE----MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I GLCK G++ +A+ L N + S G+ + Y +L+D +C+ +++ A S++ M+ +GI
Sbjct: 319 IRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 337 LP------------------------------NVYTYTILLDGLCKGGRLKDAQEVFQ-- 364
P +V TY+ LLD K + E+ +
Sbjct: 379 QPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRF 438
Query: 365 ------------DLLIKGYNL---------------------DVRTYTIMINGLCKDGLF 391
++L+K + L D TY MI G CK G
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+EAL + +++ + + AV Y II AL +KG D A ++L ++ +GL
Sbjct: 499 EEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 170/382 (44%), Gaps = 79/382 (20%)
Query: 53 CHLGQITSAFSVLCNIFKRGYQPDTITF-NTIIKI------------------QGKLAQP 93
C G +A V + ++G T+TF +TI+K + L+
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSM 653
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
DV+ Y+ II+ LCK+ + A NL S ++ ++ + +TY +LI+G C G L EA+ L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+ + + P T+ IL+D LCKEG +A+ +L M+ G P+++ Y+S++DGYC +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+ A + + + PD + S MI G CK +++AL++F + +NI+ + +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 274 SSLIDG----------------------------------------------LCKSGRIS 287
LI G LC+ GR+
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVP 893
Query: 288 DAWELVNEMHSRGLPP--NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
A ++++E+ S P N+ +Y L N ++ +++K + + + ++
Sbjct: 894 QAIKILDEISSTIYPSGKNLGSYQRL--------QFLNDVNE-EEIKKKDYVHDFHSLHS 944
Query: 346 LLDGLCKGGRLKDAQEVFQDLL 367
+ LC G+L+ A E +L
Sbjct: 945 TVSSLCTSGKLEQANEFVMSVL 966
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 29/195 (14%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + +L K + A L M + ++P++ +N +++ YC LGQ A V
Sbjct: 723 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ K+ G++ PD S++I CK + +A ++++E K
Sbjct: 783 VSR-----------------KMMGRVT-PDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK 824
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQM-----VLKSIN------PDVYTFSILVD 173
IS D + LI GFC G+++EA GLL +M V+K IN + + +
Sbjct: 825 NISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLV 884
Query: 174 ALCKEGKVKEAKNVL 188
LC++G+V +A +L
Sbjct: 885 ELCEQGRVPQAIKIL 899
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 222/428 (51%), Gaps = 5/428 (1%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQ-ITSAFSVLCNIF-KRGYQ 74
L K KH+ TA L ++ R ++ L+ + ++ FS L + K G
Sbjct: 90 LTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMI 149
Query: 75 PDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYT 134
D+I I+ G +P + + +++SL K +L + + ++ +M+ + ++ Y
Sbjct: 150 NDSIVVFEQIRSCG--LKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYN 207
Query: 135 TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 194
L+ G ++A LL++M K + PD++T++ L+ CK+ EA +V M +
Sbjct: 208 VLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERS 267
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G P++VTY+S + G+ + +A +F + + ++ + +Y+ +I+G C++ +D+A
Sbjct: 268 GVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
L L + M + +P VVTY+S++ LC+ GRI +A L+ EM + + P+ IT ++L++A
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
CK + +A+ + KKM G+ ++Y+Y L+ G CK L++A+E ++ KG++
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
TY+ +++G DE L+ + E G + Y +I + + D A+ L
Sbjct: 447 YATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFE 506
Query: 435 QMIARGLL 442
M +GL+
Sbjct: 507 SMEKKGLV 514
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 185/368 (50%), Gaps = 18/368 (4%)
Query: 13 FFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRG 72
SLVK + T + ++M V+ ++ +N+L++ G A +L + ++G
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 73 YQPDTITFNTIIKI-------------QGKLAQ----PDVVMYSTIIDSLCKDKLVNDAY 115
PD T+NT+I + Q ++ + P++V Y++ I ++ + +A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
L+ E + ++ + VTYTTLI G+C + + EA+ L M + +P V T++ ++ L
Sbjct: 294 RLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
C++G+++EA +L M +PD +T ++L++ YC + ++ A + M L D+
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
SY +I+G CK+ +++A M + +P TYS L+DG + + +L+ E
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
RGL +V Y L+ +CK VD A L + M+ +G++ + +T + + G+
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 356 LKDAQEVF 363
+ +A +F
Sbjct: 533 VTEASALF 540
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 162/324 (50%), Gaps = 18/324 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +N + K + A+S+ +M+ V P++ T+N I+ + G++ A +
Sbjct: 236 PDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRL 295
Query: 65 LCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLCK 107
I K + +T+ T+I ++ + P VV Y++I+ LC+
Sbjct: 296 FREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
D + +A L +EM K+I PD +T TLI+ +C + + AV + +M+ + D+Y+
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ L+ CK +++ AK L MI+ G P TYS L+DG+ N+ ++ +
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ L DV Y +I +CK++ VD A LF+ M + + + V ++++ ++G+++
Sbjct: 475 KRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVT 534
Query: 288 DAWELVNEMHSRGLPPNVITYSSL 311
+A L + M++R L N+ Y S+
Sbjct: 535 EASALFDVMYNRRLMVNLKLYKSI 558
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 20/236 (8%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ +N L + A L +M +++ PD T N LIN YC + + SA
Sbjct: 339 SPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK 398
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKD-KLVNDAYNLYSEML 122
V + + G + D + Y +I CK +L N L+S M+
Sbjct: 399 VKKKMIESGLKLDMYS------------------YKALIHGFCKVLELENAKEELFS-MI 439
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
K SP TY+ L+ GF + E LL + + + DV + L+ +CK +V
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVD 499
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 238
AK + M K G D V ++++ Y +V +A +F+ M L +++ Y
Sbjct: 500 YAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 308 YSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLL 367
+S L+ K ++++I + ++++ G+ P++ T+LL+ L K ++F+ ++
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 368 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDND 427
G ++ Y ++++ K G ++A L+S+ME+ G P+ TY +I +K +
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 428 KA----EKLLRQMIARGLLT 443
+A +++ R +A ++T
Sbjct: 256 EALSVQDRMERSGVAPNIVT 275
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 220/497 (44%), Gaps = 63/497 (12%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N+ L A L M R +PD+ TF LI YC + ++ A V
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDV------------------------VMYST 100
+ G +P+++T + +I G L DV ++
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIG--GFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFAN 277
Query: 101 IIDSLCKDKLVNDAYNL---------------YSEML--------------------AKR 125
++DS+C++ ND + + Y M+ +K
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKG 337
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
+ P +Y +I G C G A LL + P YT+ +L+++LCKE +A+
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
NVL +M++ Y+ + G C+++ + ++ +M + + PD + + +INGL
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 246 CKIKMVDDALNLFKQMHTENI-TPNVVTYSSLIDGLCKSGRISDAWELVNE-MHSRGLPP 303
CK+ VDDA+ + M T P+ VT ++++ GL GR +A +++N M + P
Sbjct: 458 CKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKP 517
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
V+ Y++++ L K H D A+S+ +++ + + TY I++DGLC ++ A++ +
Sbjct: 518 GVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFW 577
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
D++ D Y + GLC+ G +A + + D+G PN V Y +I +
Sbjct: 578 DDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRS 637
Query: 424 GDNDKAEKLLRQMIARG 440
G +A ++L +M G
Sbjct: 638 GLKREAYQILEEMRKNG 654
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 195/440 (44%), Gaps = 31/440 (7%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII- 84
A+ + + R PD + +I+ C G+ A G+ PD T N II
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 85 ----------------KIQG--KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
++ G K P + Y+ +++ LC V DA+ L +M +
Sbjct: 134 RLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH 193
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
PDVVT+TTLI G+C + +L+ A + ++M + I P+ T S+L+ K V+ +
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 187 VLAVMIKGGEKP-----DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ---SY 238
++ + + + +++L+D C N DIF M L V +Y
Sbjct: 254 LMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFN---DIFEIAENMSLCESVNVEFAY 310
Query: 239 SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS 298
MI+ LC+ + A + M ++ + P +Y+++I GLCK G A++L+ E
Sbjct: 311 GHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSE 370
Query: 299 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
P+ TY L+++LCK A ++++ M + Y I L GLC +
Sbjct: 371 FEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTE 430
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG-CTPNAVTYEIII 417
V +L D T +INGLCK G D+A+ ++ M C P+AVT ++
Sbjct: 431 ILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM 490
Query: 418 YALFQKGDNDKAEKLLRQMI 437
L +G ++A +L +++
Sbjct: 491 CGLLAQGRAEEALDVLNRVM 510
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 170/391 (43%), Gaps = 54/391 (13%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
F S+ + ++ +++ M + F + +I+ C + A ++ +
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 70 KRGYQPDTITFNTII----KIQGKLAQ-------------PDVVMYSTIIDSLCKDKLVN 112
+G +P ++N II K G + P Y +++SLCK+
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
A N+ ML K + Y + G C++ E + +L M+ PD YT + ++
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 173 DALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFN-TMTRME 230
+ LCK G+V +A VL M+ G PD VT +++M G +A D+ N M +
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC--------- 281
+ P V +Y+ +I GL K+ D+A+++F Q+ ++T + TY+ +IDGLC
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAK 574
Query: 282 --------------------------KSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
+SG +SDA + ++ G PNV+ Y++++
Sbjct: 575 KFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAEC 634
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
++ A ++++M+ G P+ T+ IL
Sbjct: 635 SRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 181/435 (41%), Gaps = 83/435 (19%)
Query: 94 DVVMYSTIIDSLCK-DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA--- 149
D + I S+C + ++A + + + PD + +++I C G+ EA
Sbjct: 53 DRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRR 112
Query: 150 --------------------------------VGLLNQMV--LKSINPDVYTFSILVDAL 175
+G++++++ K P + ++ L++ L
Sbjct: 113 FLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQL 172
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
C +V +A ++ M G PDVVT+++L+ GYC + E+ A +F+ M + P+
Sbjct: 173 CTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNS 232
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQM-----HTENITPNVVTYSSLIDGLCKSGRISDAW 290
+ S++I G K++ V+ L K++ + + + +++L+D +C+ G +D +
Sbjct: 233 LTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIF 292
Query: 291 ELVNE-----------------------------------MHSRGLPPNVITYSSLLDAL 315
E+ M S+GL P +Y++++ L
Sbjct: 293 EIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGL 352
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
CK+ A L+++ P+ YTY +L++ LCK A+ V + +L K
Sbjct: 353 CKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRT 412
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
R Y I + GLC E L ++ M C P+ T +I L + G D A K+L
Sbjct: 413 RIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDD 472
Query: 436 MIARGLLTGLFYATE 450
M +TG F A +
Sbjct: 473 M-----MTGKFCAPD 482
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM-VDDALNLFKQMHTENITPNVVT 272
++V +D R D + I+ +C ++ D+AL + + P+ +
Sbjct: 33 DDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLN 92
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
SS+I LC +GR +A + G P+ T + ++ L + + + +I ++
Sbjct: 93 LSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLI 152
Query: 333 --HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
+ +P++ Y L++ LC R+ DA ++ D+ +G+ DV T+T +I G C+
Sbjct: 153 GFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRE 212
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+ A + +M G PN++T ++I + D + KL++++
Sbjct: 213 LEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKEL 258
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 169/322 (52%), Gaps = 4/322 (1%)
Query: 85 KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
K +L +P+ ++ ++ +V A + EM + PD + L+ C G
Sbjct: 159 KTNPELIEPE--LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNG 216
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
+KEA + M K P++ F+ L+ C+EGK+ EAK VL M + G +PD+V ++
Sbjct: 217 SVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFT 275
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI-KMVDDALNLFKQMHT 263
+L+ GY ++ A D+ N M + P+V Y+++I LC+ K +D+A+ +F +M
Sbjct: 276 NLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER 335
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
++VTY++LI G CK G I + ++++M +G+ P+ +TY ++ A K +
Sbjct: 336 YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEE 395
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
+ LI+KMK +G P++ Y +++ CK G +K+A ++ ++ G + V T+ IMIN
Sbjct: 396 CLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMIN 455
Query: 384 GLCKDGLFDEALALMSKMEDNG 405
G G EA +M G
Sbjct: 456 GFTSQGFLIEACNHFKEMVSRG 477
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 182/349 (52%), Gaps = 7/349 (2%)
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVT---YTTLISGFCIVGQLKEAVGLLNQMVLKSI 161
L K + + L EM ++ +P+++ + L+ F +K+AV +L++M +
Sbjct: 141 LSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 221
PD Y F L+DALCK G VKEA V M + P++ ++SL+ G+C ++ +A++
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 222 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
+ M L PD+ ++ +++G + DA +L M PNV Y+ LI LC
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 282 KS-GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
++ R+ +A + EM G +++TY++L+ CK +D S++ M+ +G++P+
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
TY ++ K + ++ E+ + + +G + D+ Y ++I CK G EA+ L ++
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 401 MEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
ME NG +P T+ I+I +G +A ++M++RG+ + Y T
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGT 486
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 198/447 (44%), Gaps = 64/447 (14%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFT---FNILINCYCHLGQITSAFSVLCNIFKRGY 73
L K + + L ++M R+ P+L F +L+ + + A VL + K G
Sbjct: 141 LSKMRQFGAVWGLIEEM--RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 74 QPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTY 133
+PD F ++D+LCK+ V +A ++ +M K P++ +
Sbjct: 199 EPDEYVF------------------GCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYF 239
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
T+L+ G+C G+L EA +L QM + PD+ F+ L+ GK+ +A +++ M K
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK 299
Query: 194 GGEKPDVVTYSSLMDGYCLVNE-VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
G +P+V Y+ L+ C + +++A +F M R D+ +Y+ +I+G CK M+D
Sbjct: 300 RGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMID 359
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
++ M + + P+ VTY ++ K + + EL+ +M RG P+++ Y+ ++
Sbjct: 360 KGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY- 371
CK V A+ L +M+ G+ P V T+ I+++G G L +A F++++ +G
Sbjct: 420 RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Query: 372 --------------------------------------NLDVRTYTIMINGLCKDGLFDE 393
L+V +TI I+ L G E
Sbjct: 480 SAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKE 539
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYAL 420
A + M + P TY ++ L
Sbjct: 540 ACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 173/358 (48%), Gaps = 32/358 (8%)
Query: 5 PPIIEFNKFFTSLV----KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
PP + ++FTSL+ + A + QM + PD+ F L++ Y H G++
Sbjct: 233 PPNL---RYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCK-DKLVNDAYNLYS 119
A+ ++ ++ KRG++P+ V Y+ +I +LC+ +K +++A ++
Sbjct: 290 AYDLMNDMRKRGFEPN------------------VNCYTVLIQALCRTEKRMDEAMRVFV 331
Query: 120 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG 179
EM D+VTYT LISGFC G + + +L+ M K + P T+ ++ A K+
Sbjct: 332 EMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKE 391
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
+ +E ++ M + G PD++ Y+ ++ C + EV +A ++N M L+P V ++
Sbjct: 392 QFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFV 451
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENI--TPNVVTYSSLIDGLCKSGRIS---DAWELVN 294
IMING + +A N FK+M + I P T SL++ L + ++ D W ++
Sbjct: 452 IMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCIS 511
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
S NV ++ + AL HV A S M ++P TY L+ GL K
Sbjct: 512 NKTS-SCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 31/273 (11%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I+ + + K S+ M + VMP T+ ++ + Q ++
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
+ +RG PD + +N +I++ KL + V +A L++EM A +
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGE------------------VKEAVRLWNEMEANGL 443
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI--NPDVYTFSILVDALCKEGKVKEA 184
SP V T+ +I+GF G L EA +MV + I P T L++ L ++ K++ A
Sbjct: 444 SPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMA 503
Query: 185 KNVLAVMIKGGE--KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
K+V + + + +V ++ + V +A M M+L P +Y+ ++
Sbjct: 504 KDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLM 563
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
GL K L+ + IT VV +S
Sbjct: 564 KGLNK---------LYNRTIAAEITEKVVKMAS 587
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 214/416 (51%), Gaps = 24/416 (5%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA------------- 91
NI +N C + A ++L + + G PD IT+NT+IK +
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 92 ----QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK 147
+PDV Y+++I K+ ++N L+ EML +SPD+ +Y TL+S + +G+
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 148 EAVGLLNQMV-LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
EA +L++ + L + P + T++IL+DALCK G A + +K KP+++TY+ L
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNIL 194
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
++G C V + + + + P+ +Y+ M+ K K ++ L LF +M E
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PPNVITYSSLLDALCKNHHVDNAI 325
T + +++ L K+GR +A+E ++E+ G ++++Y++LL+ K+ ++D
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
L+++++ +G+ P+ YT+TI+++GL G A++ + G V T +I+GL
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
CK G D A+ L + ME + TY +++ L + G A KLL +G+
Sbjct: 375 CKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 168/350 (48%), Gaps = 22/350 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N + K + L +M + PD++++N L++CY LG+ AF +
Sbjct: 81 PDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKI 140
Query: 65 LC-NIFKRGYQPDTITFNTIIKIQGKLA----------------QPDVVMYSTIIDSLCK 107
L +I G P T+N ++ K +P+++ Y+ +I+ LCK
Sbjct: 141 LHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCK 200
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ V + E+ +P+ VTYTT++ + ++++ + L +M + D +
Sbjct: 201 SRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFA 260
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
+V AL K G+ +EA + +++ G + D+V+Y++L++ Y ++ +D+ +
Sbjct: 261 NCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEI 320
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
L PD +++I++NGL I A + + P+VVT + LIDGLCK+G +
Sbjct: 321 EMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHV 380
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
A L M R + TY+S++ LCK+ + A L+ ++G+
Sbjct: 381 DRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 22/150 (14%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
S I+ +N K + L ++++ + + PD +T I++N ++G A
Sbjct: 291 SQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEK 350
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
L I + G QP +T N +ID LCK V+ A L++ M
Sbjct: 351 HLACIGEMGMQPSVVTCN------------------CLIDGLCKAGHVDRAMRLFASMEV 392
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+ D TYT+++ C G+L A LL
Sbjct: 393 R----DEFTYTSVVHNLCKDGRLVCASKLL 418
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 220/476 (46%), Gaps = 60/476 (12%)
Query: 47 ILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-----------------KIQGK 89
+LI + LG V I G +P T +N +I +++
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
+PD Y+ +I +CK +V++A L +M + P+V TYT LI GF I G++ EA
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 150 VGLLNQMVLKSINPDVYT-----------------FSILVDALCKEGKVKE--------- 183
+ L M ++ +NP+ T F +LV + K+ ++
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 184 ------AKNVLAVMIKGGEK---PDVVTYSSLMDGYCLVNEVNKAE--DIFNTMTRMELA 232
AK + K GE+ PD T+++ M CL+ + E IF+ +
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMS--CLLKGHDLVETCRIFDGFVSRGVK 387
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
P Y +++ L + + KQM + + +V +Y+++ID LCK+ RI +A
Sbjct: 388 PGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMF 447
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
+ EM RG+ PN++T+++ L V +++K+ G P+V T++++++ LC+
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
+KDA + F+++L G + TY I+I C G D ++ L +KM++NG +P+
Sbjct: 508 AKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYA 567
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF-YATEFEAVEELSAPGLRSPVR 467
Y I + + KAE+LL+ M+ GL F Y+T +A LS G S R
Sbjct: 568 YNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA---LSESGRESEAR 620
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 187/429 (43%), Gaps = 17/429 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +N + K AI L +QM+ P++FT+ ILI+ + G++ A
Sbjct: 213 PDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQ 272
Query: 65 LCNIFKRGYQPDTIT-----------------FNTIIKIQGKLAQPDVVMYSTIIDSLCK 107
L + R P+ T F ++ K + V Y ++ L
Sbjct: 273 LEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSN 332
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ + + ++ + PD T+ +S L E + + V + + P
Sbjct: 333 NSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG 392
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ +LV AL + E L M G V +Y++++D C + A M
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
++P++ +++ ++G V + +++ P+V+T+S +I+ LC++ I
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
DA++ EM G+ PN ITY+ L+ + C D ++ L KMK G+ P++Y Y +
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
CK ++K A+E+ + +L G D TY+ +I L + G EA + S +E +GC
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Query: 408 PNAVTYEII 416
P++ T ++
Sbjct: 633 PDSYTKRLV 641
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
S L +AL + + ++ L+K+++ G + +L+ + G K +VF +
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
G R Y +I+ L K D A +M +GC P+ TY I+I+ + +KG D+
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 429 AEKLLRQMIARGLLTGLFYAT 449
A +L++QM G +F T
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYT 254
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 220/473 (46%), Gaps = 57/473 (12%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + FN LVK +++M + D++T+ IL+ +I F +
Sbjct: 145 PSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKL 204
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L I+K G P+ V+Y+T++ +LCK+ V A +L SEM
Sbjct: 205 L----------------QIMKTSG--VAPNAVVYNTLLHALCKNGKVGRARSLMSEMK-- 244
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
P+ VT+ LIS +C +L +++ LL + PDV T + +++ LC EG+V EA
Sbjct: 245 --EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEA 302
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
VL + G K DVV ++L+ GYC + ++ A+ F M R P+V++Y+++I G
Sbjct: 303 LEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAG 362
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH------- 297
C + M+D AL+ F M T+ I N T+++LI GL GR D +++ M
Sbjct: 363 YCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHG 422
Query: 298 SRGLPPNVITY----------------------------SSLLDALCKNHHVDNAISLIK 329
+R P N + Y S L +LC+ +D+ +
Sbjct: 423 ARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
+M +G +P++ L+ + G+++++ E+ D++ +GY T+ +I G CK
Sbjct: 483 QMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+ + M + GC P+ +Y ++ L KGD KA L +M+ + ++
Sbjct: 543 KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 183/388 (47%), Gaps = 31/388 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + +N +L K A SL +M P+ TFNILI+ YC+ ++ +
Sbjct: 214 APNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMV 269
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
+L F G+ PD +T ++ +++ K + DVV +T++ C
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ A + EM K P+V TY LI+G+C VG L A+ N M +I +
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA 389
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY-CLVN---EVNKAEDI 222
TF+ L+ L G+ + +L +M + D V + + +D Y C++ + N+ ED
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMM----QDSDTV-HGARIDPYNCVIYGFYKENRWEDA 444
Query: 223 FNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
+ +ME L P S + LC+ +DD + QM E P+++ LI
Sbjct: 445 LEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYS 504
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY 341
+ G+I ++ EL+N+M +RG P T+++++ CK V N I ++ M +G +P+
Sbjct: 505 QHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTE 564
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+Y LL+ LC G ++ A +F ++ K
Sbjct: 565 SYNPLLEELCVKGDIQKAWLLFSRMVEK 592
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 5/340 (1%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEML-AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
Y + LC + + Y L EM + + PD + T+I GF +K + +++ +
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
I P + F+ ++D L KE + M+ G DV TY LM G L N +
Sbjct: 139 SKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+ M +AP+ Y+ +++ LCK V A +L +M PN VT++ L
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNIL 254
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I C ++ + L+ + S G P+V+T + +++ LC V A+ ++++++ +G
Sbjct: 255 ISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
+V L+ G C G+++ AQ F ++ KGY +V TY ++I G C G+ D AL
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+ M+ + N T+ +I L G D K+L M
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 11/302 (3%)
Query: 147 KEAVGLLNQMVLKSINPDVY----TFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVV 201
K A G L S P T+ L LC + +L M G PD
Sbjct: 54 KSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDA 113
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF-KQ 260
+ +++ G+ + + + + +++ + P ++ ++ +++ L K + +D A F ++
Sbjct: 114 IFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRK 172
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
M I +V TY L+ GL + RI D ++L+ M + G+ PN + Y++LL ALCKN
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
V A SL+ +MK PN T+ IL+ C +L + + + G+ DV T T
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
++ LC +G EAL ++ ++E G + V ++ G A++ +M +G
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 441 LL 442
L
Sbjct: 349 YL 350
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 155/375 (41%), Gaps = 54/375 (14%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + FN ++ + ++ L ++ +PD+ T ++ C+ G+++ A V
Sbjct: 246 PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 65 LCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLCK 107
L + +G + D + NT++K ++ K P+V Y+ +I C
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCD 365
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV---------- 157
+++ A + +++M I + T+ TLI G I G+ + + +L M
Sbjct: 366 VGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI 425
Query: 158 -------------------------LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
++ + P S + +LC++G + + K MI
Sbjct: 426 DPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI 485
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
G P ++ L+ Y ++ ++ ++ N M P +++ +I G CK V
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
+ + + M P+ +Y+ L++ LC G I AW L + M + + P+ +SSL+
Sbjct: 546 NGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Query: 313 DALCKNH--HVDNAI 325
L + HV++++
Sbjct: 606 FCLSQKTAIHVNSSL 620
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 171/322 (53%), Gaps = 14/322 (4%)
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
++ S+ +A+ ++ +T + S F I G S PD+ + S D
Sbjct: 35 FSSVSKGVARVLASTQITLSPKDSAFTITGS--------------SWKPDLDSGSFSDDP 80
Query: 175 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 234
E + ++ + L ++ GG KP+V + L+ C N + KA + M + PD
Sbjct: 81 RSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPD 140
Query: 235 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
+Y+ ++N LCK V A+ L ++M N VTY++L+ GLC G ++ + + V
Sbjct: 141 ASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVE 200
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
+ +GL PN TYS LL+A K D A+ L+ ++ +G PN+ +Y +LL G CK G
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 355 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYE 414
R DA +F++L KG+ +V +Y I++ LC DG ++EA +L+++M+ P+ VTY
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 415 IIIYALFQKGDNDKAEKLLRQM 436
I+I +L G ++A ++L++M
Sbjct: 321 ILINSLAFHGRTEQALQVLKEM 342
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 221/460 (48%), Gaps = 24/460 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + L K AI + + M ++PD + L+N C G + A +
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQ--------------PDVVMYSTIIDSLCK 107
+ + GY +T+T+N +++ + G L Q P+ YS ++++ K
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
++ ++A L E++ K P++V+Y L++GFC G+ +A+ L ++ K +V +
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS 283
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++IL+ LC +G+ +EA ++LA M G P VVTY+ L++ +A + M+
Sbjct: 284 YNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS 343
Query: 228 R--MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK-SG 284
+ + SY+ +I LCK VD + +M PN TY++ I LC+ +
Sbjct: 344 KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNS 402
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
++ +A+ ++ + ++ Y S++ +LC+ + A L+ +M G P+ +TY+
Sbjct: 403 KVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYS 462
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLD--VRTYTIMINGLCKDGLFDEALALMSKME 402
L+ GLC G A EV ++ + N V + MI GLCK D A+ + M
Sbjct: 463 ALIRGLCLEGMFTGAMEVLS-IMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMV 521
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+ PN TY I++ + + + + A+++L ++ R ++
Sbjct: 522 EKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVI 561
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 174/339 (51%), Gaps = 4/339 (1%)
Query: 81 NTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF 140
++ I G +PD+ S D + ++D+++ ++ P+V T L+
Sbjct: 57 DSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDL 116
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
C +LK+A+ ++ MV I PD ++ LV+ LCK G V A ++ M G +
Sbjct: 117 CKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNT 176
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
VTY++L+ G C++ +N++ + + LAP+ +YS ++ K + D+A+ L +
Sbjct: 177 VTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDE 236
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
+ + PN+V+Y+ L+ G CK GR DA L E+ ++G NV++Y+ LL LC +
Sbjct: 237 IIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGR 296
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG---YNLDVRT 377
+ A SL+ +M P+V TY IL++ L GR + A +V ++ + KG + + +
Sbjct: 297 WEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-MSKGNHQFRVTATS 355
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
Y +I LCK+G D + + +M C PN TY I
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 173/370 (46%), Gaps = 23/370 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P ++ + K + A+ L ++ + P+L ++N+L+ +C G+ A +
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ + +G++ + +++N +++ LC D +A +L +EM
Sbjct: 268 LFRELPAKGFKANVVSYNILLRC------------------LCCDGRWEEANSLLAEMDG 309
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL--KSINPDVYTFSILVDALCKEGKV 181
+P VVTY LI+ G+ ++A+ +L +M +++ ++ LCKEGKV
Sbjct: 310 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV 369
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN-EVNKAEDIFNTMTRMELAPDVQSYSI 240
L MI KP+ TY+++ C N +V +A I +++ + Y
Sbjct: 370 DLVVKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKS 428
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM-HSR 299
+I LC+ A L +M P+ TYS+LI GLC G + A E+++ M S
Sbjct: 429 VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESE 488
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
P V +++++ LCK D A+ + + M + +PN TY IL++G+ L+ A
Sbjct: 489 NCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELA 548
Query: 360 QEVFQDLLIK 369
+EV +L ++
Sbjct: 549 KEVLDELRLR 558
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%)
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
T+T PD+ S S + + D+ + + + T PNV + L+ LCK+
Sbjct: 61 TITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKAN 120
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
R+ A ++ M S G+ P+ Y+ L++ LCK +V A+ L++KM+ G N TY
Sbjct: 121 RLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYN 180
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
L+ GLC G L + + + L+ KG + TY+ ++ K+ DEA+ L+ ++
Sbjct: 181 ALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK 240
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
G PN V+Y +++ ++G D A L R++ A+G
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
++ ++ S ++ + G PNV T LL LCK RLK A V + ++ G D YT
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
++N LCK G A+ L+ KMED+G N VTY ++ L G +++ + + +++ +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 440 GLLTGLF-YATEFEAV 454
GL F Y+ EA
Sbjct: 206 GLAPNAFTYSFLLEAA 221
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 215/416 (51%), Gaps = 23/416 (5%)
Query: 48 LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-----------------KIQGKL 90
L+N G+ A +V + + G++P I++ T++ +++
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 91 AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV 150
+ D + ++ +I++ + + DA +M ++P TY TLI G+ I G+ + +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 151 GLLNQMVLKS---INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
LL+ M+ + + P++ TF++LV A CK+ KV+EA V+ M + G +PD VTY+++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 208 DGYCLVNEVNKAE-DIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
Y E +AE ++ M E A P+ ++ I++ G C+ V D L ++M
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
+ N+V ++SLI+G + E++ M + +VITYS++++A +++ A
Sbjct: 291 VEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 350
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
+ K+M G+ P+ + Y+IL G + K A+E+ + L+++ +V +T +I+G
Sbjct: 351 QVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGW 409
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
C +G D+A+ + +KM G +PN T+E +++ + KAE++L+ M G+
Sbjct: 410 CSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 465
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 27/414 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I + ++ K Y + S+ +++ D FN +IN + G + A
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQ-----------------PDVVMYSTIIDS 104
L + + G P T T+NT+IK I GK + P++ ++ ++ +
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ-LKEAVGLLNQMVLKS-IN 162
CK K V +A+ + +M + PD VTY T+ + + G+ ++ ++ +MV+K
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAK 257
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 222
P+ T I+V C+EG+V++ + M + + ++V ++SL++G+ V + + +++
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
M + DV +YS ++N ++ A +FK+M + P+ YS L G +
Sbjct: 318 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Query: 283 SGRISDAWELVNEM--HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
+ A EL+ + SR PNV+ +++++ C N +D+A+ + KM G+ PN+
Sbjct: 378 AKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 434
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
T+ L+ G + + A+EV Q + G + T+ ++ GL DE+
Sbjct: 435 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 488
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 142/316 (44%), Gaps = 55/316 (17%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTI----------IKIQ 87
V P++ TFN+L+ +C ++ A+ V+ + + G +PDT+T+NTI ++ +
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 88 GKL---------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP---------- 128
++ A+P+ ++ C++ V D M R+
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 129 -------------------------DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
DV+TY+T+++ + G +++A + +MV + P
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D + +SIL + + K+A+ +L +I +P+VV +++++ G+C ++ A +F
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
N M + ++P+++++ ++ G ++K A + + M + P T+ L + +
Sbjct: 423 NKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVA 482
Query: 284 GRISDAWELVNEMHSR 299
G ++ + +N + +
Sbjct: 483 GLTDESNKAINALKCK 498
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 115/210 (54%), Gaps = 6/210 (2%)
Query: 235 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
V+S + ++N L + +A +FK + P++++Y++L+ + + +V+
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
E+ G + I ++++++A ++ ++++A+ + KMK G+ P TY L+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 355 RLKDAQEVFQDLLIKGYNLDV----RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
+ + + E+ DL+++ N+DV RT+ +++ CK +EA ++ KME+ G P+
Sbjct: 165 KPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 411 VTYEIIIYALFQKGDNDKAE-KLLRQMIAR 439
VTY I QKG+ +AE +++ +M+ +
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMK 253
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 126/312 (40%), Gaps = 58/312 (18%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I FN + K K A + ++M+ V PD T+N + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 65 L----------------CNIFKRGY---------------------QPDTITFNTIIK-- 85
+ C I GY + + + FN++I
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 86 ---------------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
++ + DV+ YST++++ + A ++ EM+ + PD
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
Y+ L G+ + K+A LL ++++S P+V F+ ++ C G + +A V
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M K G P++ T+ +LM GY V + KAE++ M + P+ ++ ++ +
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGL 484
Query: 251 VDD---ALNLFK 259
D+ A+N K
Sbjct: 485 TDESNKAINALK 496
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 120/285 (42%), Gaps = 40/285 (14%)
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
++G V + + LM+ ++A+ +F T+ P + SY+ ++ + K
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQY 96
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY--- 308
++ ++ + + ++++I+ +SG + DA + + +M GL P TY
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 309 -------------SSLLD----------------------ALCKNHHVDNAISLIKKMKH 333
S LLD A CK V+ A ++KKM+
Sbjct: 157 IKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216
Query: 334 QGILPNVYTY-TILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGLF 391
G+ P+ TY TI + KG ++ EV + +++K + RT I++ G C++G
Sbjct: 217 CGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+ L + +M++ N V + +I + D D +++L M
Sbjct: 277 RDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
MR ++ FN V+ + M V D+ T++ ++N + G +
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 348
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIK--IQGKL--------------AQPDVVMYSTIIDS 104
A V + K G +PD ++ + K ++ K ++P+VV+++T+I
Sbjct: 349 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISG 408
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
C + ++DA ++++M +SP++ T+ TL+ G+ V Q +A +L M + P+
Sbjct: 409 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
Query: 165 VYTFSILVDAL 175
TF +L +A
Sbjct: 469 NSTFLLLAEAW 479
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%)
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
V + + L++ L + A ++ K + G P++ +YT LL + + +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
++ G LD + +IN + G ++A+ + KM++ G P TY +I G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 425 DNDKAEKLLRQMIARG 440
+++ +LL M+ G
Sbjct: 165 KPERSSELLDLMLEEG 180
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 198/420 (47%), Gaps = 19/420 (4%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ------- 92
PD T++ LIN + GQ A +++ ++ + P T+N +I G
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 93 ----------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
PD+V ++ ++ + + + A + + M ++ PD T+ +I
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 143 VGQLKEAVGLLNQMVLKSI--NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
+GQ +A+ L N M K PDV TF+ ++ +G+++ + V M+ G KP++
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
V+Y++LM Y + A + + + + PDV SY+ ++N + + A +F
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
M E PNVVTY++LID +G +++A E+ +M G+ PNV++ +LL A ++
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
N +++ + +GI N Y + L+ A ++Q + K D T+TI
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+I+G C+ + EA++ + +MED Y ++ A ++G +AE + QM G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 215/440 (48%), Gaps = 20/440 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P +N + + ++ A+ + ++M V PDL T NI+++ Y Q + A S
Sbjct: 210 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 269
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ +PDT TFN II KL Q + A +L++ M
Sbjct: 270 YFELMKGAKVRPDTTTFNIIIYCLSKLGQS------------------SQALDLFNSMRE 311
Query: 124 KRIS--PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
KR PDVVT+T+++ + + G+++ + MV + + P++ +++ L+ A G
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
A +VL + + G PDVV+Y+ L++ Y + KA+++F M + P+V +Y+ +
Sbjct: 372 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 431
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
I+ + +A+ +F+QM + I PNVV+ +L+ +S + + +++ SRG+
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE 361
N Y+S + + ++ AI+L + M+ + + + T+TIL+ G C+ + +A
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 362 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
+++ L Y+ ++ K G EA ++ ++M+ GC P+ + Y +++A
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611
Query: 422 QKGDNDKAEKLLRQMIARGL 441
KA +L +M A G+
Sbjct: 612 ASEKWGKACELFLEMEANGI 631
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 174/347 (50%), Gaps = 2/347 (0%)
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
+Y+ +I + V+ A L+ EM PD TY LI+ GQ + A+ L++ M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+ +I P T++ L++A G +EA V M G PD+VT++ ++ Y +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI--TPNVVTYS 274
+KA F M ++ PD +++I+I L K+ AL+LF M + P+VVT++
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
S++ G I + + M + GL PN+++Y++L+ A + A+S++ +K
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
GI+P+V +YT LL+ + + A+EVF + + +V TY +I+ +G EA
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ + +ME +G PN V+ ++ A + + +L +RG+
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 216/491 (43%), Gaps = 54/491 (10%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRV--MPDLFTFNILINCYCHLGQITSAF 62
P FN L K + A+ L M +R PD+ TF +++ Y G+I +
Sbjct: 281 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 340
Query: 63 SVLCNIFKRGYQPDTITFN-------------TIIKIQGKLAQ----PDVVMYSTIIDSL 105
+V + G +P+ +++N T + + G + Q PDVV Y+ +++S
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
+ + A ++ M +R P+VVTY LI + G L EAV + QM I P+V
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
+ L+ A + K VL+ G + Y+S + Y E+ KA ++ +
Sbjct: 461 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS 520
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M + ++ D +++I+I+G C++ +A++ K+M +I YSS++ K G+
Sbjct: 521 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 580
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
+++A + N+M G P+VI Y+S+L A + A L +M+ GI P+ +
Sbjct: 581 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSA 640
Query: 346 LLDGLCKGGR----------LKDAQ---------EVFQ------------DL--LIKGY- 371
L+ KGG+ +++ + E+F DL ++ Y
Sbjct: 641 LMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYL 700
Query: 372 -NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
+L + M++ K G + + L K+ +G N TY I++ L G+ K
Sbjct: 701 PSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYI 760
Query: 431 KLLRQMIARGL 441
++L M G+
Sbjct: 761 EVLEWMSGAGI 771
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 196/450 (43%), Gaps = 18/450 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ +N + TA+S+ + ++PD+ ++ L+N Y Q A V
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGK---LAQ--------------PDVVMYSTIIDSLCK 107
+ K +P+ +T+N +I G LA+ P+VV T++ + +
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K + + S ++ I+ + Y + I + +L++A+ L M K + D T
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
F+IL+ C+ K EA + L M YSS++ Y +V +AE IFN M
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK 592
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
PDV +Y+ M++ + A LF +M I P+ + S+L+ K G+ S
Sbjct: 593 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 652
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+ + L++ M + +P + + A AI LI+ M ++ +L
Sbjct: 653 NVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQML 712
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
K G+++ ++F ++ G ++++TY I++ L G + + + ++ M G
Sbjct: 713 HLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 772
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
P+ Y II + ++ + E L+RQ +
Sbjct: 773 PSNQMYRDII-SFGERSAGIEFEPLIRQKL 801
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 198/420 (47%), Gaps = 19/420 (4%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ------- 92
PD T++ LIN + GQ A +++ ++ + P T+N +I G
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 93 ----------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
PD+V ++ ++ + + + A + + M ++ PD T+ +I
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 143 VGQLKEAVGLLNQMVLK--SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
+GQ +A+ L N M K PDV TF+ ++ +G+++ + V M+ G KP++
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
V+Y++LM Y + A + + + + PDV SY+ ++N + + A +F
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
M E PNVVTY++LID +G +++A E+ +M G+ PNV++ +LL A ++
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
N +++ + +GI N Y + L+ A ++Q + K D T+TI
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+I+G C+ + EA++ + +MED Y ++ A ++G +AE + QM G
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 215/440 (48%), Gaps = 20/440 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P +N + + ++ A+ + ++M V PDL T NI+++ Y Q + A S
Sbjct: 78 APSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALS 137
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ +PDT TFN II KL Q + A +L++ M
Sbjct: 138 YFELMKGAKVRPDTTTFNIIIYCLSKLGQS------------------SQALDLFNSMRE 179
Query: 124 KRIS--PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
KR PDVVT+T+++ + + G+++ + MV + + P++ +++ L+ A G
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
A +VL + + G PDVV+Y+ L++ Y + KA+++F M + P+V +Y+ +
Sbjct: 240 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 299
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
I+ + +A+ +F+QM + I PNVV+ +L+ +S + + +++ SRG+
Sbjct: 300 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE 361
N Y+S + + ++ AI+L + M+ + + + T+TIL+ G C+ + +A
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 362 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
+++ L Y+ ++ K G EA ++ ++M+ GC P+ + Y +++A
Sbjct: 420 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 479
Query: 422 QKGDNDKAEKLLRQMIARGL 441
KA +L +M A G+
Sbjct: 480 ASEKWGKACELFLEMEANGI 499
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 174/347 (50%), Gaps = 2/347 (0%)
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
+Y+ +I + V+ A L+ EM PD TY LI+ GQ + A+ L++ M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+ +I P T++ L++A G +EA V M G PD+VT++ ++ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI--TPNVVTYS 274
+KA F M ++ PD +++I+I L K+ AL+LF M + P+VVT++
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
S++ G I + + M + GL PN+++Y++L+ A + A+S++ +K
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 335 GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEA 394
GI+P+V +YT LL+ + + A+EVF + + +V TY +I+ +G EA
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 395 LALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ + +ME +G PN V+ ++ A + + +L +RG+
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 216/491 (43%), Gaps = 54/491 (10%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRV--MPDLFTFNILINCYCHLGQITSAF 62
P FN L K + A+ L M +R PD+ TF +++ Y G+I +
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 63 SVLCNIFKRGYQPDTITFN-------------TIIKIQGKLAQ----PDVVMYSTIIDSL 105
+V + G +P+ +++N T + + G + Q PDVV Y+ +++S
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
+ + A ++ M +R P+VVTY LI + G L EAV + QM I P+V
Sbjct: 269 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
+ L+ A + K VL+ G + Y+S + Y E+ KA ++ +
Sbjct: 329 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS 388
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M + ++ D +++I+I+G C++ +A++ K+M +I YSS++ K G+
Sbjct: 389 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 448
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
+++A + N+M G P+VI Y+S+L A + A L +M+ GI P+ +
Sbjct: 449 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSA 508
Query: 346 LLDGLCKGGR----------LKDAQ---------EVFQ------------DL--LIKGY- 371
L+ KGG+ +++ + E+F DL ++ Y
Sbjct: 509 LMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYL 568
Query: 372 -NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
+L + M++ K G + + L K+ +G N TY I++ L G+ K
Sbjct: 569 PSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYI 628
Query: 431 KLLRQMIARGL 441
++L M G+
Sbjct: 629 EVLEWMSGAGI 639
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 196/451 (43%), Gaps = 18/451 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ +N + TA+S+ + ++PD+ ++ L+N Y Q A V
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGK---LAQ--------------PDVVMYSTIIDSLCK 107
+ K +P+ +T+N +I G LA+ P+VV T++ + +
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K + + S ++ I+ + Y + I + +L++A+ L M K + D T
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
F+IL+ C+ K EA + L M YSS++ Y +V +AE IFN M
Sbjct: 401 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK 460
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
PDV +Y+ M++ + A LF +M I P+ + S+L+ K G+ S
Sbjct: 461 MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPS 520
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
+ + L++ M + +P + + A AI LI+ M ++ +L
Sbjct: 521 NVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQML 580
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
K G+++ ++F ++ G ++++TY I++ L G + + + ++ M G
Sbjct: 581 HLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 640
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
P+ Y II + ++ + E L+RQ +
Sbjct: 641 PSNQMYRDII-SFGERSAGIEFEPLIRQKLG 670
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 196/424 (46%), Gaps = 53/424 (12%)
Query: 19 KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTI 78
K + + A L M R V + TF ILI Y G + A + G PD I
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 79 TFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
F S +I +L + + ++A + + + L R PDV+ YT L+
Sbjct: 223 AF------------------SIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVR 263
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
G+C G++ EA + +M L I P+VYT+SI++DALC+ G++ A +V A M+ G P
Sbjct: 264 GWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP 323
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
+ +T+++LM + K ++N M ++ PD +Y+ +I C+ + +++A+ +
Sbjct: 324 NAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVL 383
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
M + N T++++ + K ++ A + ++M PN +TY+ L+ +
Sbjct: 384 NTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGS 443
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
D + + K+M + + PNV TY +L+ C G +A ++F++++
Sbjct: 444 KSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV----------- 492
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
E+ TP+ YE+++ L + G K E+L+ +MI
Sbjct: 493 -----------------------EEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
Query: 439 RGLL 442
+GL+
Sbjct: 530 KGLV 533
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 174/346 (50%), Gaps = 1/346 (0%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y+ +ID K + + A++L M ++ + + T+T LI + G EAV N+M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
PD FSI++ L ++ + EA++ + K +PDV+ Y++L+ G+C E++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+AE +F M + P+V +YSI+I+ LC+ + A ++F M PN +T+++L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
K+GR ++ N+M G P+ ITY+ L++A C++ +++NA+ ++ M +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
N T+ + + K + A ++ ++ + TY I++ D L +
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
+M+D PN TY +++ G + A KL ++M+ LT
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLT 498
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 157/326 (48%), Gaps = 10/326 (3%)
Query: 118 YSEMLAKRISPDVVTYTTLISGFCIVG-QLKEAVGLLNQMVLKSI--NPDVYTFSILVDA 174
+S++ ++SP VV G G L +++ N + + + ++ ++D
Sbjct: 101 FSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDL 160
Query: 175 LCKEGKVKE---AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
GKV++ A +++ +M + + T++ L+ Y ++A FN M
Sbjct: 161 ---SGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGC 217
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
PD ++SI+I+ L + + +A + F + + P+V+ Y++L+ G C++G IS+A +
Sbjct: 218 VPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEK 276
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
+ EM G+ PNV TYS ++DALC+ + A + M G PN T+ L+
Sbjct: 277 VFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHV 336
Query: 352 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
K GR + +V+ + G D TY +I C+D + A+ +++ M C NA
Sbjct: 337 KAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAS 396
Query: 412 TYEIIIYALFQKGDNDKAEKLLRQMI 437
T+ I + +K D + A ++ +M+
Sbjct: 397 TFNTIFRYIEKKRDVNGAHRMYSKMM 422
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 143/301 (47%), Gaps = 19/301 (6%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P +I + + + A + ++M + P+++T++I+I+ C GQI+ A
Sbjct: 250 RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
V ++ G P+ ITFN ++++ K + + V+ +Y++M
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVL------------------QVYNQM 351
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
PD +TY LI C L+ AV +LN M+ K + TF+ + + K+ V
Sbjct: 352 KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDV 411
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
A + + M++ +P+ VTY+ LM + + + M E+ P+V +Y ++
Sbjct: 412 NGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLL 471
Query: 242 INGLCKIKMVDDALNLFKQMHTEN-ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
+ C + ++A LFK+M E +TP++ Y ++ L ++G++ ELV +M +G
Sbjct: 472 VTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Query: 301 L 301
L
Sbjct: 532 L 532
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 205/411 (49%), Gaps = 17/411 (4%)
Query: 55 LGQITSAF-SVLCNIFKRGYQPDTIT----FNTIIKIQG---KLAQPDVVMYSTIIDSLC 106
+G++ S+F S+ N+ R P F + G KL Q + +
Sbjct: 1 MGKVPSSFRSMPANLLVRKTTPSPPAPPRDFRNRTAVGGDSAKLPQNTQAPREPSLRNPF 60
Query: 107 KDKLVNDAYNLYSEMLA-KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS---IN 162
K ++DA +L++ + A RI D+ + +++ + + + + V L Q +LKS
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLF-QHILKSQPNFR 119
Query: 163 PDVYTFSILVDALCK--EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
P TF IL+ C+ + + VL +M+ G +PD VT + C V++A+
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLIDG 279
D+ +T PD +Y+ ++ LCK K + +M + ++ P++V+++ LID
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
+C S + +A LV+++ + G P+ Y++++ C A+ + KKMK +G+ P+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
TY L+ GL K GR+++A+ + ++ GY D TYT ++NG+C+ G AL+L+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL-LTGLFYAT 449
+ME GC PN TY +++ L + DK +L M + G+ L YAT
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYAT 410
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 183/384 (47%), Gaps = 36/384 (9%)
Query: 29 LSQQMDFRRVMPDLFTFNILINCYCHL--GQITSAFSVLCNIFKRGYQPDTITFNTIIKI 86
L Q +FR P TF IL++ C I++ VL + G +PD +T + ++
Sbjct: 112 LKSQPNFR---PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVR- 167
Query: 87 QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
SLC+ V++A +L E+ K PD TY L+ C L
Sbjct: 168 -----------------SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL 210
Query: 147 KEAVGLLNQMVLK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
+++M + PD+ +F+IL+D +C ++EA +++ + G KPD Y++
Sbjct: 211 HVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNT 270
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
+M G+C +++ ++A ++ M + PD +Y+ +I GL K V++A K M
Sbjct: 271 IMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
P+ TY+SL++G+C+ G A L+ EM +RG PN TY++LL LCK +D +
Sbjct: 331 YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGM 390
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMING 384
L + MK G+ Y L+ L K G++ +A EVF D + +L D Y+ +
Sbjct: 391 ELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF-DYAVDSKSLSDASAYSTL--- 446
Query: 385 LCKDGLFDEALALMSKMEDNGCTP 408
+ L + K ++ G P
Sbjct: 447 -------ETTLKWLKKAKEQGLVP 463
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 171/345 (49%), Gaps = 5/345 (1%)
Query: 76 DTIT-FNTIIKIQGKLAQPDVVMYSTIIDSLCK--DKLVNDAYNLYSEMLAKRISPDVVT 132
DT+ F I+K Q +P + ++ C+ D +++ + + + M+ + PD VT
Sbjct: 103 DTVKLFQHILKSQPNF-RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVT 161
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
+ C G++ EA L+ ++ K PD YT++ L+ LCK + + M
Sbjct: 162 TDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR 221
Query: 193 KGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
+ KPD+V+++ L+D C + +A + + + PD Y+ ++ G C +
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
+A+ ++K+M E + P+ +TY++LI GL K+GR+ +A + M G P+ TY+SL
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
++ +C+ A+SL+++M+ +G PN TY LL GLCK + E+++ + G
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
L+ Y ++ L K G EA + D+ +A Y +
Sbjct: 402 KLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 170/336 (50%), Gaps = 5/336 (1%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR--ISPDVVTYTTLISGFCIV--GQLKEA 149
D+ +++++ S +VND L+ +L + P T+ L+S C +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
+LN MV + PD T I V +LC+ G+V EAK+++ + + PD TY+ L+
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 210 YCLVNEVNKAEDIFNTMTR-MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
C +++ + + M ++ PD+ S++I+I+ +C K + +A+ L ++ P
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
+ Y++++ G C + S+A + +M G+ P+ ITY++L+ L K V+ A +
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
K M G P+ TYT L++G+C+ G A + +++ +G + TY +++GLCK
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
L D+ + L M+ +G + Y ++ +L + G
Sbjct: 384 RLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 17/219 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ F ++ +K+ A+ L ++ PD F +N ++ +C L + + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 65 LCNIFKRGYQPDTITFNTII---KIQGKLA--------------QPDVVMYSTIIDSLCK 107
+ + G +PD IT+NT+I G++ +PD Y+++++ +C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
A +L EM A+ +P+ TY TL+ G C + + + L M + +
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
++ LV +L K GKV EA V + D YS+L
Sbjct: 408 YATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 208/393 (52%), Gaps = 23/393 (5%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPD------ 94
D+F +N+L++ L + A V ++ KR + D T+ +I+ G++ + D
Sbjct: 237 DIFAYNMLLDA---LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 95 -----------VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV 143
VV Y+T++ L K K+V+ A ++S M+ P+ TY+ L++
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 144 GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
GQL G++ ++ + + +Y++ LV L K G V EA + M K + +Y
Sbjct: 354 GQLVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSY 410
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
S+++ C + +A ++ + + + D Y+ + + L K+K + +LF++M
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 470
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
+ +P++ TY+ LI + G + +A + E+ P++I+Y+SL++ L KN VD
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
A K+M+ +G+ P+V TY+ L++ K R++ A +F+++L+KG ++ TY I+++
Sbjct: 531 AHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
L K+G EA+ L SKM+ G TP+++TY ++
Sbjct: 591 CLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 179/335 (53%), Gaps = 14/335 (4%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+ L +M + ++ +N L+ + A V + + G +P+ T++ ++
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 86 I---QGKLAQPDVV-----------MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVV 131
+ +G+L + D V +YS ++ +L K V++A+ L+ +M + + +
Sbjct: 349 LLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
+Y +++ C G+ EA+ +L+++ K + D ++ + AL K ++ ++ M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
K G PD+ TY+ L+ + V EV++A +IF + R + PD+ SY+ +IN L K V
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
D+A FK+M + + P+VVTYS+L++ K+ R+ A+ L EM +G PN++TY+ L
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
LD L KN A+ L KMK QG+ P+ TYT+L
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 209/434 (48%), Gaps = 25/434 (5%)
Query: 43 FTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK--------------IQG 88
FT+ L+ Y + AF V C I + G++ D +N ++ ++
Sbjct: 204 FTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKK 263
Query: 89 KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKE 148
+ + D Y+ +I ++ + ++A L++EM+ + ++ +VV Y TL+ + +
Sbjct: 264 RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDK 323
Query: 149 AVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV----MIKGGEKPDVVTYS 204
A+ + ++MV P+ YT+S+L++ L EG++ V+ + M +G YS
Sbjct: 324 AIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG-------IYS 376
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
L+ + V++A +F M + + SY M+ LC +A+ + ++H +
Sbjct: 377 YLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEK 436
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
+ + + Y+++ L K +IS +L +M G P++ TY+ L+ + + VD A
Sbjct: 437 GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEA 496
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
I++ ++++ P++ +Y L++ L K G + +A F+++ KG N DV TY+ ++
Sbjct: 497 INIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC 556
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
K + A +L +M GC PN VTY I++ L + G +A L +M +GL
Sbjct: 557 FGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Query: 445 LFYATEFEAVEELS 458
T E ++ +S
Sbjct: 617 SITYTVLERLQSVS 630
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 16/310 (5%)
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+L+ MV +++ ++ T +IL+ G ++ + L ++ K K + TY L+ Y
Sbjct: 158 ILDSMVKSNVHGNISTVNILIGFF---GNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYL 214
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+ +KA D++ + R D+ +Y+++++ L K + A +F+ M + +
Sbjct: 215 RSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEY 271
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY+ +I + + G+ +A L NEM + GL NV+ Y++L+ L K VD AI + +M
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 332 KHQGILPNVYTYTILLDGLCKGG---RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
G PN YTY++LL+ L G RL E+ + + +G Y+ ++ L K
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTLSKL 385
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG-LFY 447
G EA L M +Y ++ +L G +A ++L ++ +G++T + Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 448 ATEFEAVEEL 457
T F A+ +L
Sbjct: 446 NTVFSALGKL 455
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 109/213 (51%), Gaps = 6/213 (2%)
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
L + ++ I ++M + + ++ + +I+I + + L L K+ ++ N
Sbjct: 148 LPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKW---DLKMNSF 204
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY L+ +S S A+++ E+ G ++ Y+ LLDAL K+ + A + + M
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDM 261
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
K + + YTYTI++ + + G+ +A +F +++ +G L+V Y ++ L K +
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
D+A+ + S+M + GC PN TY +++ L +G
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
PSP I +N S + AI++ ++++ PD+ ++N LINC G + A
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
+ F ++Q K PDVV YST+++ K + V AY+L+ EML
Sbjct: 533 ---------------VRFK---EMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML 574
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
K P++VTY L+ G+ EAV L ++M + + PD T+++L
Sbjct: 575 VKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 218/441 (49%), Gaps = 48/441 (10%)
Query: 48 LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-----------------KIQGKL 90
L+N G+ A +V + + G++P I++ T++ +++
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 91 AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV 150
+ D + ++ +I++ + + DA +M ++P TY TLI G+ I G+ + +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 151 GLLNQMVLKS---INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
LL+ M+ + + P++ TF++LV A CK+ KV+EA V+ M + G +PD VTY+++
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 208 DGYCLVNEVNKAE-DIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
Y E +AE ++ M E A P+ ++ I++ G C+ V D L ++M
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMR 290
Query: 266 ITPNVVTYSSLIDGLC----KSG-----------RISDAWELVNE----------MHSRG 300
+ N+V ++SLI+G + G ++ ELV M
Sbjct: 291 VEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECN 350
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+ +VITYS++++A +++ A + K+M G+ P+ + Y+IL G + K A+
Sbjct: 351 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 410
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
E+ + L+++ +V +T +I+G C +G D+A+ + +KM G +PN T+E +++
Sbjct: 411 ELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 469
Query: 421 FQKGDNDKAEKLLRQMIARGL 441
+ KAE++L+ M G+
Sbjct: 470 LEVKQPWKAEEVLQMMRGCGV 490
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 199/439 (45%), Gaps = 52/439 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I + ++ K Y + S+ +++ D FN +IN + G + A
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQ-----------------PDVVMYSTIIDS 104
L + + G P T T+NT+IK I GK + P++ ++ ++ +
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ-LKEAVGLLNQMVLKS-IN 162
CK K V +A+ + +M + PD VTY T+ + + G+ ++ ++ +MV+K
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAK 257
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 222
P+ T I+V C+EG+V++ + M + + ++V ++SL++G+ V + + +++
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 223 --------FNT-----------------MTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
FN M + DV +YS ++N ++ A +
Sbjct: 318 TLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM--HSRGLPPNVITYSSLLDAL 315
FK+M + P+ YS L G ++ A EL+ + SR PNV+ +++++
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGW 434
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
C N +D+A+ + KM G+ PN+ T+ L+ G + + A+EV Q + G +
Sbjct: 435 CSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPEN 494
Query: 376 RTYTIMINGLCKDGLFDEA 394
T+ ++ GL DE+
Sbjct: 495 STFLLLAEAWRVAGLTDES 513
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 165/355 (46%), Gaps = 38/355 (10%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTI----------IKIQ 87
V P++ TFN+L+ +C ++ A+ V+ + + G +PDT+T+NTI ++ +
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 88 GKL---------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
++ A+P+ ++ C++ V D M R+ ++V + +LI+
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKE----GKVKEAKNVLAVMIKG 194
GF V+ D T ++L+ + +E G K VL +M +
Sbjct: 304 GFV--------------EVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC 349
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
K DV+TYS++M+ + + KA +F M + + PD +YSI+ G + K A
Sbjct: 350 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 409
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
L + + E+ PNVV ++++I G C +G + DA + N+M G+ PN+ T+ +L+
Sbjct: 410 EELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 468
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+ A +++ M+ G+ P T+ +L + G ++ + L K
Sbjct: 469 YLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK 523
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 115/210 (54%), Gaps = 6/210 (2%)
Query: 235 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
V+S + ++N L + +A +FK + P++++Y++L+ + + +V+
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
E+ G + I ++++++A ++ ++++A+ + KMK G+ P TY L+ G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 355 RLKDAQEVFQDLLIKGYNLDV----RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
+ + + E+ DL+++ N+DV RT+ +++ CK +EA ++ KME+ G P+
Sbjct: 165 KPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 411 VTYEIIIYALFQKGDNDKAE-KLLRQMIAR 439
VTY I QKG+ +AE +++ +M+ +
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMK 253
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 154/339 (45%), Gaps = 45/339 (13%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I FN + K K A + ++M+ V PD T+N + CY G+ A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 65 LCN--IFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSL 105
+ + K +P+ T ++ +++ + ++V+++++I+
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 106 CK--DK---------LVNDAYNLYSEMLAKR--------------ISPDVVTYTTLISGF 140
+ D+ L+ ++N E++ + + DV+TY+T+++ +
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
G +++A + +MV + PD + +SIL + + K+A+ +L +I +P+V
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNV 424
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
V +++++ G+C ++ A +FN M + ++P+++++ ++ G ++K A + +
Sbjct: 425 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
M + P T+ L + +G ++ + +N + +
Sbjct: 485 MRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK 523
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
++G V + + LM+ ++A+ +F T+ P + SY+ ++ + K
Sbjct: 37 VEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQY 96
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY--- 308
++ ++ + + ++++I+ +SG + DA + + +M GL P TY
Sbjct: 97 GSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTL 156
Query: 309 -------------SSLLD----------------------ALCKNHHVDNAISLIKKMKH 333
S LLD A CK V+ A ++KKM+
Sbjct: 157 IKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEE 216
Query: 334 QGILPNVYTY-TILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMINGLCKDGLF 391
G+ P+ TY TI + KG ++ EV + +++K + RT I++ G C++G
Sbjct: 217 CGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDND 427
+ L + +M++ N V + +I + D D
Sbjct: 277 RDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRD 312
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%)
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
V + + L++ L + A ++ K + G P++ +YT LL + + +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
++ G LD + +IN + G ++A+ + KM++ G P TY +I G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 425 DNDKAEKLLRQMIARG 440
+++ +LL M+ G
Sbjct: 165 KPERSSELLDLMLEEG 180
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 163/299 (54%), Gaps = 2/299 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS-PDVVTYTTLISGFCIVGQLKEAV 150
QP+ +++ ++ CK+ +N A+ + EM IS P+ +TY+TL+ + KEAV
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 151 GLLNQMVLK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
L M+ K I+PD TF+++++ C+ G+V+ AK +L M K G P+V YS+LM+G
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+C V ++ +A+ F+ + + L D Y+ ++N C+ D+A+ L +M +
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRAD 372
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
+TY+ ++ GL GR +A +++++ S G+ N +Y +L+ALC N ++ A+ +
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
M +GI P+ T+ L+ LC+ G + V L G +++ ++ +CK+
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 172/331 (51%), Gaps = 18/331 (5%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
+ P+ FNIL+ +C G I AF V+ + + G ++ P+ +
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG-----------------ISYPNSIT 234
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
YST++D L +A L+ +M++K ISPD VT+ +I+GFC G+++ A +L+ M
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFM 294
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
NP+VY +S L++ CK GK++EAK + K G K D V Y++LM+ +C E
Sbjct: 295 KKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET 354
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
++A + M D +Y++++ GL ++AL + Q +E + N +Y +
Sbjct: 355 DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
++ LC +G + A + ++ M RG+ P+ T++ L+ LC++ + + + ++ G+
Sbjct: 415 LNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGL 474
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLL 367
+P ++ +++ +CK +L E+ L+
Sbjct: 475 IPGPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 154/286 (53%), Gaps = 2/286 (0%)
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG-EKPDVVTYSSLMDGYCLVNEVNKA 219
+ P+ F+ILV CK G + A V+ M + G P+ +TYS+LMD + +A
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 220 EDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
++F M E ++PD ++++MING C+ V+ A + M PNV YS+L++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
G CK G+I +A + +E+ GL + + Y++L++ C+N D A+ L+ +MK
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
+ TY ++L GL GR ++A ++ +G +L+ +Y I++N LC +G ++A+ +
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 399 SKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
S M + G P+ T+ ++ L + G + ++L + GL+ G
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPG 477
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 164/334 (49%), Gaps = 7/334 (2%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR---ISPDVVTYTTLISGFCIVGQLKE 148
+P + ST ++ L VN + L + AK + P+ + L+ C G +
Sbjct: 157 KPSLNAISTCLNLLIDSGEVNLSRKLL--LYAKHNLGLQPNTCIFNILVKHHCKNGDINF 214
Query: 149 AVGLLNQMVLKSIN-PDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGGEKPDVVTYSSL 206
A ++ +M I+ P+ T+S L+D L + KEA + MI K G PD VT++ +
Sbjct: 215 AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVM 274
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
++G+C EV +A+ I + M + P+V +YS ++NG CK+ + +A F ++ +
Sbjct: 275 INGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGL 334
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 326
+ V Y++L++ C++G +A +L+ EM + + +TY+ +L L + A+
Sbjct: 335 KLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQ 394
Query: 327 LIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 386
++ + +G+ N +Y I+L+ LC G L+ A + + +G T+ ++ LC
Sbjct: 395 MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLC 454
Query: 387 KDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
+ G + + ++ G P ++ ++ ++
Sbjct: 455 ESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP + FN + A + M P+++ ++ L+N +C +G+I A
Sbjct: 265 SPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA-- 322
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
TF+ + K KL D V Y+T+++ C++ ++A L EM A
Sbjct: 323 -------------KQTFDEVKKTGLKL---DTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
R D +TY ++ G G+ +EA+ +L+Q + ++ + ++ I+++ALC G++++
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A L+VM + G P T++ L+ C + R+ L P +S+ ++
Sbjct: 427 AVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVE 486
Query: 244 GLCK 247
+CK
Sbjct: 487 SICK 490
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 44/417 (10%)
Query: 52 YCHLGQI-TSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKL 110
YCH ++ S +L + + G I + K +L +P+ ++ ++ +
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLI--EEMRKENPQLIEPE--LFVVLVQRFASADM 198
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
V A + EM PD + L+ C G +K+A L M ++ ++ F+
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTS 257
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
L+ C+ GK+ EAK VL M + G +PD+V Y++L+ GY ++ A D+ M R
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
P+ Y+++I LCK+ +++A+ +F +M +VVTY++L+ G CK G+I +
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
++++M +GL P+ +TY ++ A K + + L++KM+ P++ Y +++
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG----- 405
CK G +K+A ++ ++ G + V T+ IMINGL G EA +M G
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVS 497
Query: 406 ---------------------------------CTPNAVTYEIIIYALFQKGDNDKA 429
C N +++ I I+ALF KG +A
Sbjct: 498 QYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEA 554
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 180/358 (50%), Gaps = 6/358 (1%)
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVT---YTTLISGFCIVGQLKEAVG 151
+ +Y +++ L K + + L EM ++ +P ++ + L+ F +K+A+
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAIE 204
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+L++M PD Y F L+DALCK G VK+A + M + ++ ++SL+ G+C
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWC 263
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
V ++ +A+ + M PD+ Y+ +++G + DA +L + M PN
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
Y+ LI LCK R+ +A ++ EM +V+TY++L+ CK +D ++ M
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+G++P+ TY ++ K ++ E+ + + Y+ D+ Y ++I CK G
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
EA+ L ++ME+NG +P T+ I+I L +G +A ++M+ RGL + Y T
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGT 501
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 159/331 (48%), Gaps = 24/331 (7%)
Query: 34 DFRRVMP-DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ 92
D R P +L F L+ +C +G++ A VL + + G++PD
Sbjct: 243 DMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPD---------------- 286
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
+V Y+ ++ + DAY+L +M + P+ YT LI C V +++EA+ +
Sbjct: 287 --IVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+M DV T++ LV CK GK+ + VL MIK G P +TY +M +
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ ++ M ++E PD+ Y+++I CK+ V +A+ L+ +M ++P V T
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT 464
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS---LLDALCKNHHVDNAISLIK 329
+ +I+GL G + +A + EM +RGL +V Y + LL+ + K+ ++ A +
Sbjct: 465 FVIMINGLASQGCLLEASDHFKEMVTRGL-FSVSQYGTLKLLLNTVLKDKKLEMAKDVWS 523
Query: 330 KMKHQGILP-NVYTYTILLDGLCKGGRLKDA 359
+ +G NV ++TI + L G K+A
Sbjct: 524 CITSKGACELNVLSWTIWIHALFSKGYEKEA 554
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 171/349 (48%), Gaps = 27/349 (7%)
Query: 12 KFFTSLV----KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
++FTSL+ + A + QM+ PD+ + L++ Y + G++ A+ +L +
Sbjct: 253 RYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRD 312
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS 127
+ +RG++P+ Y+ +I +LCK + +A ++ EM
Sbjct: 313 MRRRGFEPNANC------------------YTVLIQALCKVDRMEEAMKVFVEMERYECE 354
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
DVVTYT L+SGFC G++ + +L+ M+ K + P T+ ++ A K+ +E +
Sbjct: 355 ADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLEL 414
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
+ M + PD+ Y+ ++ C + EV +A ++N M L+P V ++ IMINGL
Sbjct: 415 MEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLAS 474
Query: 248 IKMVDDALNLFKQMHTENITPNVVTYSS---LIDGLCKSGRISDAWELVNEMHSRGLPP- 303
+ +A + FK+M T + +V Y + L++ + K ++ A ++ + + S+G
Sbjct: 475 QGCLLEASDHFKEMVTRGLF-SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACEL 533
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
NV++++ + AL + A S +M +P T+ L+ GL K
Sbjct: 534 NVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKK 582
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT---YSSLLDALCKNHHVDNAI 325
++ Y S++ L K + W L+ EM R P +I + L+ V AI
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAI 203
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
++ +M G P+ Y + LLD LCK G +KDA ++F+D+ ++ + +++R +T ++ G
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGW 262
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
C+ G EA ++ +M + G P+ V Y ++ G A LLR M RG
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 143/333 (42%), Gaps = 21/333 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P I+++ + A A L + M R P+ + +LI C + ++ A
Sbjct: 284 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
V + + + D +T Y+ ++ CK ++ Y + +M+
Sbjct: 344 VFVEMERYECEADVVT------------------YTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K + P +TY ++ +E + L+ +M +PD+ +++++ CK G+VKE
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ--SYSIM 241
A + M + G P V T+ +++G + +A D F M L Q + ++
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLL 505
Query: 242 INGLCKIKMVDDALNLFKQMHTENITP-NVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
+N + K K ++ A +++ + ++ NV++++ I L G +A EM
Sbjct: 506 LNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMD 565
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
P T++ L+ L K ++ + A + +K+++
Sbjct: 566 FMPQPDTFAKLMKGLKKLYNREFAGEITEKVRN 598
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 176/349 (50%), Gaps = 3/349 (0%)
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL--KEAVGL 152
V Y+ +I++ ++ + L M ++ISP ++TY T+I+ C G L + +GL
Sbjct: 176 VFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGL 234
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+M + I PD+ T++ L+ A G EA+ V M GG PD+ TYS L++ +
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ + K D+ M PD+ SY++++ K + +A+ +F QM TPN T
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
YS L++ +SGR D +L EM S P+ TY+ L++ + + ++L M
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ I P++ TY ++ KGG +DA+++ Q + + YT +I + L++
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYE 474
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
EAL + M + G P+ T+ ++Y+ + G ++E +L +++ G+
Sbjct: 475 EALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 178/332 (53%), Gaps = 1/332 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+P+ +Y+ +I L ++ L++ ++ EM ++ +S V +YT LI+ + G+ + ++
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEA-KNVLAVMIKGGEKPDVVTYSSLMDGY 210
LL++M + I+P + T++ +++A + G E + A M G +PD+VTY++L+
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
+ ++AE +F TM + PD+ +YS ++ K++ ++ +L +M + P++
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
+Y+ L++ KSG I +A + ++M + G PN TYS LL+ ++ D+ L +
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
MK P+ TY IL++ +GG K+ +F D++ + D+ TY +I K GL
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
++A ++ M N P++ Y +I A Q
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 188/404 (46%), Gaps = 18/404 (4%)
Query: 32 QMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI----- 86
+M + V +F++ LIN Y G+ ++ +L + P +T+NT+I
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 225
Query: 87 ---QGKLA----------QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTY 133
+G L QPD+V Y+T++ + L ++A ++ M I PD+ TY
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
+ L+ F + +L++ LL +M PD+ ++++L++A K G +KEA V M
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 194 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
G P+ TYS L++ + + +F M PD +Y+I+I + +
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
+ LF M ENI P++ TY +I K G DA +++ M + + P+ Y+ +++
Sbjct: 406 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
A + + A+ M G P++ T+ LL +GG +K+++ + L+ G
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPR 525
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
+ T+ I + G F+EA+ ME + C P+ T E ++
Sbjct: 526 NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 207/454 (45%), Gaps = 20/454 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQI--TSA 61
S + + + + Y T++ L +M ++ P + T+N +IN C G +
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGL 231
Query: 62 FSVLCNIFKRGYQPDTITFNTI-----IKIQGKLAQ------------PDVVMYSTIIDS 104
+ + G QPD +T+NT+ I+ G A+ PD+ YS ++++
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
K + + +L EM + PD+ +Y L+ + G +KEA+G+ +QM P+
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
T+S+L++ + G+ + + + M PD TY+ L++ + + +F+
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFH 411
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M + PD+++Y +I K + +DA + + M +I P+ Y+ +I+ ++
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA 471
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+A N MH G P++ T+ SLL + + V + +++ ++ GI N T+
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFN 531
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
++ +GG+ ++A + + D+ + D RT +++ L DE +M+ +
Sbjct: 532 AQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKAS 591
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
P+ + Y +++ + D +LL +M++
Sbjct: 592 DILPSIMCYCMMLAVYGKTERWDDVNELLEEMLS 625
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 39/253 (15%)
Query: 222 IFNTMTR-MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+F M R + P+ Y+IMI+ L + ++D L +F +M ++ ++ +V +Y++LI+
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD--NAISLIKKMKHQGILP 338
++GR + EL++ M + + P+++TY+++++A C +D + L +M+H+GI P
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQP 245
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQ-------------------------------DLL 367
++ TY LL G +A+ VF+ DLL
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 368 ---IKGYNL-DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
G +L D+ +Y +++ K G EA+ + +M+ GCTPNA TY +++ Q
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 424 GDNDKAEKLLRQM 436
G D +L +M
Sbjct: 366 GRYDDVRQLFLEM 378
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 169/383 (44%), Gaps = 36/383 (9%)
Query: 19 KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTI 78
++ Y L +M PD T+NILI + G ++ ++ + +PD
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 79 TFNTIIKIQGK-------------LAQPDVV----MYSTIIDSLCKDKLVNDAYNLYSEM 121
T+ II GK + D+V Y+ +I++ + L +A ++ M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+P + T+ +L+ F G +KE+ +L+++V I + TF+ ++A + GK
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
+EA M K PD T +++ Y V++ + F M ++ P + Y +M
Sbjct: 544 EEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMM 603
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA-WELV----NEM 296
+ K + DD L ++M ++ V +I + K D+ W++V +++
Sbjct: 604 LAVYGKTERWDDVNELLEEM----LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKL 659
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY-----TYTILLDGLC 351
+S G + Y++LLDAL + A ++ + +G+ P ++ +++ + +
Sbjct: 660 NSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMS 719
Query: 352 KGGRLKDAQEVF----QDLLIKG 370
+GG + A V+ D+L+KG
Sbjct: 720 EGG-MYTALSVWLNDINDMLLKG 741
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 99/191 (51%), Gaps = 2/191 (1%)
Query: 254 ALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
+L LFK M + PN Y+ +I L + G + E+ +EM S+G+ +V +Y++L+
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG-RLKDAQEVFQDLLIKGY 371
+A +N + ++ L+ +MK++ I P++ TY +++ +GG + +F ++ +G
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEK 431
D+ TY +++ GL DEA + M D G P+ TY ++ + +K
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 432 LLRQMIARGLL 442
LL +M + G L
Sbjct: 304 LLGEMASGGSL 314
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 221/471 (46%), Gaps = 55/471 (11%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + +N ++++ K + A L +M R + PD +T++ LI + G SA S
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIID---SLCKDKLVNDAYNLYSE 120
L K++ D+V+YS +I+ LC + A +++S
Sbjct: 212 WLQ------------------KMEQDRVSGDLVLYSNLIELSRRLCD---YSKAISIFSR 250
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
+ I+PD+V Y ++I+ + +EA L+ +M + P+ ++S L+ + K
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
EA +V A M + D+ T + ++D Y ++ V +A+ +F ++ +M++ P+V SY+
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
++ + ++ +A++LF+ M ++I NVVTY+++I K+ A LV EM SRG
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI------------------------ 336
+ PN ITYS+++ K +D A +L +K++ G+
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 337 -------LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
LP+ + L K GR ++A VF+ G D+ + MIN ++
Sbjct: 491 RLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQ 550
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+ + + KM G P++ +++ A ++ + +KA+ + R+M G
Sbjct: 551 RYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 164/338 (48%), Gaps = 1/338 (0%)
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ +P V Y ++ Q A GL ++M +++ PD YT+S L+ + KEG A
Sbjct: 150 KYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSA 209
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ L M + D+V YS+L++ + + +KA IF+ + R + PD+ +Y+ MIN
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
K K+ +A L K+M+ + PN V+YS+L+ ++ + +A + EM +
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
+ T + ++D + V A L ++ I PNV +Y +L + +A +F+
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+ K +V TY MI K ++A L+ +M+ G PNA+TY II + G
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 425 DNDKAEKLLRQMIARGL-LTGLFYATEFEAVEELSAPG 461
D+A L +++ + G+ + + Y T A E + G
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMG 487
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/441 (19%), Positives = 189/441 (42%), Gaps = 63/441 (14%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + ++ + V+ + A+S+ +M DL T NI+I+ Y L + A +
Sbjct: 293 PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
++ K +P+ +++NTI+++ G+ +L +A +L+ M K
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEA------------------ELFGEAIHLFRLMQRK 394
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
I +VVTY T+I + + ++A L+ +M + I P+ T+S ++ K GK+ A
Sbjct: 395 DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ + G + D V Y +++ Y V + A+ +
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL---------------------- 492
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
L ++K+ P+ + + I L K+GR +A + + G +
Sbjct: 493 LHELKL-----------------PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
+ + +++ +N N I + +KM+ G P+ ++L+ K + A V++
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYR 595
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYE--IIIYALFQ 422
++ +G + M++ F+ +L ++E + PN + E +++ AL++
Sbjct: 596 EMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESD---PNVNSKELHLVVAALYE 652
Query: 423 KGDN-DKAEKLLRQMIARGLL 442
+ D + A +++ +M RG+L
Sbjct: 653 RADKLNDASRVMNRMRERGIL 673
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 201/433 (46%), Gaps = 16/433 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I FN + + Y A SL Q+ R +P T+ +LI YC G I A V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKL-VNDAYNLYSEMLA 123
L + P TI V +Y+ I+ L K K +A +++ M
Sbjct: 213 LVEMQNHHVSPKTI---------------GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR 257
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
R P TY +I+ + + + L +M P++ T++ LV+A +EG ++
Sbjct: 258 DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK 317
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A+ + + + G +PDV Y++LM+ Y A +IF+ M M PD SY+IM++
Sbjct: 318 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 377
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
+ + DA +F++M I P + ++ L+ K+ ++ +V EM G+ P
Sbjct: 378 AYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 437
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+ +S+L+ + ++ +M++ ++ TY IL++ K G L+ +E+F
Sbjct: 438 DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 497
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+L K + DV T+T I + L+ + L + +M D+GC P+ T ++++ A +
Sbjct: 498 VELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSE 557
Query: 424 GDNDKAEKLLRQM 436
++ +LR M
Sbjct: 558 EQVEQVTSVLRTM 570
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 159/300 (53%), Gaps = 6/300 (2%)
Query: 148 EAVGLLNQMVLK--SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
+++ L+ + +L+ S PDV F++L+DA ++ + KEA+++ +++ P TY+
Sbjct: 136 DSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL 195
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPD---VQSYSIMINGLCKIKM-VDDALNLFKQM 261
L+ YC+ + +AE + M ++P V Y+ I GL K K ++A+++F++M
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+ P TY+ +I+ K+ + +W+L EM S PN+ TY++L++A +
Sbjct: 256 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 315
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
+ A + ++++ G+ P+VY Y L++ + G A E+F + G D +Y IM
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ + GL +A A+ +M+ G P ++ +++ A + D K E ++++M G+
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 177/349 (50%), Gaps = 4/349 (1%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
QPDV+ ++ +ID+ + +A +LY ++L R P TY LI +C+ G ++ A
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 152 LLNQMVLKSINPD---VYTFSILVDALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
+L +M ++P V ++ ++ L K +G +EA +V M + KP TY+ ++
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 208 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
+ Y ++ + ++ M + P++ +Y+ ++N + + + A +F+Q+ + +
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 327
P+V Y++L++ ++G A E+ + M G P+ +Y+ ++DA + +A ++
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 328 IKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 387
++MK GI P + ++ +LL K + + + +++ G D M+N +
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 451
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
G F + ++++ME+ CT + TY I+I + G ++ E+L ++
Sbjct: 452 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 173/405 (42%), Gaps = 22/405 (5%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
PD+ FN+LI+ Y Q A S+ + + Y P T Y+
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT------------------YA 194
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPD---VVTYTTLISGFCIV-GQLKEAVGLLNQ 155
+I + C L+ A + EM +SP V Y I G G +EA+ + +
Sbjct: 195 LLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR 254
Query: 156 MVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 215
M P T++++++ K K + + M KP++ TY++L++ +
Sbjct: 255 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314
Query: 216 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
KAE+IF + L PDV Y+ ++ + A +F M P+ +Y+
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 276 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
++D ++G SDA + EM G+ P + ++ LL A K V +++K+M G
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
+ P+ + +L+ + G+ +++ ++ D+ TY I+IN K G +
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
L ++++ P+ VT+ I A +K K ++ +MI G
Sbjct: 495 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 139/331 (41%), Gaps = 23/331 (6%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P +N K + L +M + P++ T+ L+N + G A
Sbjct: 259 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 62 FSVLCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDS 104
+ + + G +PD +N +++ +Q +PD Y+ ++D+
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
+ L +DA ++ EM I+P + ++ L+S + + + ++ +M + PD
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
+ + +++ + G+ + + +LA M G D+ TY+ L++ Y + + E++F
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
+ PDV +++ I + K+ L +F++M P+ T L+
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEE 558
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
++ ++ MH +G +T SSL+ L
Sbjct: 559 QVEQVTSVLRTMH-KG-----VTVSSLVPKL 583
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 201/433 (46%), Gaps = 16/433 (3%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +I FN + + Y A SL Q+ R +P T+ +LI YC G I A V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKL-VNDAYNLYSEMLA 123
L + P TI V +Y+ I+ L K K +A +++ M
Sbjct: 235 LVEMQNHHVSPKTI---------------GVTVYNAYIEGLMKRKGNTEEAIDVFQRMKR 279
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
R P TY +I+ + + + L +M P++ T++ LV+A +EG ++
Sbjct: 280 DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEK 339
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A+ + + + G +PDV Y++LM+ Y A +IF+ M M PD SY+IM++
Sbjct: 340 AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 399
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
+ + DA +F++M I P + ++ L+ K+ ++ +V EM G+ P
Sbjct: 400 AYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP 459
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+ +S+L+ + ++ +M++ ++ TY IL++ K G L+ +E+F
Sbjct: 460 DTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 519
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+L K + DV T+T I + L+ + L + +M D+GC P+ T ++++ A +
Sbjct: 520 VELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSE 579
Query: 424 GDNDKAEKLLRQM 436
++ +LR M
Sbjct: 580 EQVEQVTSVLRTM 592
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 159/300 (53%), Gaps = 6/300 (2%)
Query: 148 EAVGLLNQMVLK--SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
+++ L+ + +L+ S PDV F++L+DA ++ + KEA+++ +++ P TY+
Sbjct: 158 DSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL 217
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPD---VQSYSIMINGLCKIKM-VDDALNLFKQM 261
L+ YC+ + +AE + M ++P V Y+ I GL K K ++A+++F++M
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+ P TY+ +I+ K+ + +W+L EM S PN+ TY++L++A +
Sbjct: 278 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 337
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
+ A + ++++ G+ P+VY Y L++ + G A E+F + G D +Y IM
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 397
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ + GL +A A+ +M+ G P ++ +++ A + D K E ++++M G+
Sbjct: 398 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 177/349 (50%), Gaps = 4/349 (1%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
QPDV+ ++ +ID+ + +A +LY ++L R P TY LI +C+ G ++ A
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 152 LLNQMVLKSINPD---VYTFSILVDALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
+L +M ++P V ++ ++ L K +G +EA +V M + KP TY+ ++
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 208 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
+ Y ++ + ++ M + P++ +Y+ ++N + + + A +F+Q+ + +
Sbjct: 294 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 327
P+V Y++L++ ++G A E+ + M G P+ +Y+ ++DA + +A ++
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 328 IKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 387
++MK GI P + ++ +LL K + + + +++ G D M+N +
Sbjct: 414 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 473
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
G F + ++++ME+ CT + TY I+I + G ++ E+L ++
Sbjct: 474 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 173/405 (42%), Gaps = 22/405 (5%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
PD+ FN+LI+ Y Q A S+ + + Y P T Y+
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT------------------YA 216
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPD---VVTYTTLISGFCIV-GQLKEAVGLLNQ 155
+I + C L+ A + EM +SP V Y I G G +EA+ + +
Sbjct: 217 LLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQR 276
Query: 156 MVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 215
M P T++++++ K K + + M KP++ TY++L++ +
Sbjct: 277 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336
Query: 216 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
KAE+IF + L PDV Y+ ++ + A +F M P+ +Y+
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 276 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
++D ++G SDA + EM G+ P + ++ LL A K V +++K+M G
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
+ P+ + +L+ + G+ +++ ++ D+ TY I+IN K G +
Sbjct: 457 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 516
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
L ++++ P+ VT+ I A +K K ++ +MI G
Sbjct: 517 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 139/331 (41%), Gaps = 23/331 (6%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P +N K + L +M + P++ T+ L+N + G A
Sbjct: 281 RCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 340
Query: 62 FSVLCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDS 104
+ + + G +PD +N +++ +Q +PD Y+ ++D+
Sbjct: 341 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 400
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
+ L +DA ++ EM I+P + ++ L+S + + + ++ +M + PD
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
+ + +++ + G+ + + +LA M G D+ TY+ L++ Y + + E++F
Sbjct: 461 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 520
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
+ PDV +++ I + K+ L +F++M P+ T L+
Sbjct: 521 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEE 580
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
++ ++ MH +G +T SSL+ L
Sbjct: 581 QVEQVTSVLRTMH-KG-----VTVSSLVPKL 605
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 134/251 (53%), Gaps = 5/251 (1%)
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
T S ++ L K GK +A + M K G K D + +SLMD N + A ++F
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
+ + PD ++++I+I+G CK + DDA + M TP+VVTY+S ++ CK G
Sbjct: 265 LFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
E++ EM G PNV+TY+ ++ +L K+ V A+ + +KMK G +P+ Y+
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED-- 403
L+ L K GR KDA E+F+D+ +G DV Y MI+ + AL L+ +MED
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 404 -NGCTPNAVTY 413
C+PN TY
Sbjct: 444 GESCSPNVETY 454
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 179/376 (47%), Gaps = 24/376 (6%)
Query: 72 GYQPDTITFNTIIKIQGKLAQPDVVM-------------------YSTIIDSLCKDKLVN 112
GY T+N ++ + GK D++ S ++ L K N
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYN 220
Query: 113 DAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
A + + EM + D + +L+ ++ A + ++ +I PD TF+IL
Sbjct: 221 KAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNIL 279
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
+ CK K +A+ ++ +M PDVVTY+S ++ YC + + ++ M
Sbjct: 280 IHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGC 339
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
P+V +Y+I+++ L K K V +AL ++++M + P+ YSSLI L K+GR DA E
Sbjct: 340 NPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAE 399
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH---QGILPNVYTYTILLD 348
+ +M ++G+ +V+ Y++++ A + + A+ L+K+M+ + PNV TY LL
Sbjct: 400 IFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLK 459
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
C ++K + ++ ++DV TY ++I GLC G +EA + G P
Sbjct: 460 MCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Query: 409 NAVTYEIIIYALFQKG 424
T ++++ L +K
Sbjct: 520 RDSTCKMLVDELEKKN 535
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 139/348 (39%), Gaps = 58/348 (16%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRR-VMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+K L K+ Y A+ +M+ V D N L++ I A V +F
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
DTI +PD ++ +I CK + +DA + M +PD
Sbjct: 267 ------DTI-------------KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPD 307
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VVTYT+ + +C G + +L +M NP+V T++I++ +L K +V EA V
Sbjct: 308 VVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYE 367
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M + G PD YSSL+ A +IF MT + DV Y+ MI+
Sbjct: 368 KMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHS 427
Query: 250 MVDDALNLFKQMHTE---NITPNVVTYSSL------------------------------ 276
+ AL L K+M E + +PNV TY+ L
Sbjct: 428 RDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVS 487
Query: 277 -----IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
I GLC SG++ +A E +G+ P T L+D L K +
Sbjct: 488 TYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN 535
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 31/287 (10%)
Query: 202 TYSSLMD--GYC--------LVNEVNKAED----IFNTMTRMELAPDVQSYSIMINGLCK 247
TY++++D G C LVNE+NK E+ +TM+++ + L K
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKV------------MRRLAK 215
Query: 248 IKMVDDALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
+ A++ F +M + + + +SL+D L K I A E+ ++ + P+
Sbjct: 216 SGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDAR 274
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
T++ L+ CK D+A +++ MK P+V TYT ++ CK G + E+ +++
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
G N +V TYTI+++ L K EAL + KM+++GC P+A Y +I+ L + G
Sbjct: 335 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 394
Query: 427 DKAEKLLRQMIARGLLTG-LFYATEFEAVEELSAP--GLRSPVRVED 470
A ++ M +G+ L Y T A S LR R+ED
Sbjct: 395 KDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 21/281 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P FN K + + A ++ M PD+ T+ + YC G +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L + + G P+VV Y+ ++ SL K K V +A +Y +M
Sbjct: 331 LEEMRENG------------------CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED 372
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
PD Y++LI G+ K+A + M + + DV ++ ++ A + + A
Sbjct: 373 GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMA 432
Query: 185 KNVLAVMI-KGGE--KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
+L M + GE P+V TY+ L+ C ++ + + M + +++ DV +Y ++
Sbjct: 433 LRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILL 492
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
I GLC V++A F++ + + P T L+D L K
Sbjct: 493 IRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P ++ + SL K+K A A+ + ++M +PD ++ LI+ G+ A
Sbjct: 340 NPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAE 399
Query: 64 VLCNIFKRGYQPDTITFNTIIKI--------------------QGKLAQPDVVMYSTIID 103
+ ++ +G + D + +NT+I +G+ P+V Y+ ++
Sbjct: 400 IFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLK 459
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
C K + L M+ +S DV TY LI G C+ G+++EA + V K + P
Sbjct: 460 MCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVP 519
Query: 164 DVYTFSILVDALCKEGKVKEAK 185
T +LVD L K+ + EAK
Sbjct: 520 RDSTCKMLVDELEKKN-MAEAK 540
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 190/392 (48%), Gaps = 27/392 (6%)
Query: 55 LGQITSAFSVLCNIFK-----RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDK 109
L ++++A + ++FK +G++ T +N +I+ GK+ Q ++ +S + D K
Sbjct: 101 LKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLI-WSLVDDMKAKKL 159
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
L + + L S A+ ++KEA+G ++M + F+
Sbjct: 160 LSKETFALISRRYAR------------------ARKVKEAIGAFHKMEEFGFKMESSDFN 201
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
++D L K V +A+ V M K +PD+ +Y+ L++G+ + + +++ M
Sbjct: 202 RMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE 261
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
PDV +Y I+IN CK K ++A+ F +M N P+ + SLI+GL +++DA
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
E S G P TY++L+ A C + +++A + +M+ +G+ PN TY I+L
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
L + R K+A EV+Q + + V TY IM+ C D A+ + +M+ G P
Sbjct: 382 LIRMQRSKEAYEVYQTMSCEP---TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPG 438
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ +I AL + D+A + +M+ G+
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 175/393 (44%), Gaps = 22/393 (5%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N SL K K + SL M ++++ TF ++ Y ++ A +
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+ G++ ++ FN ++ D+L K + V DA ++ +M KR PD
Sbjct: 190 EFGFKMESSDFNRML------------------DTLSKSRNVGDAQKVFDKMKKKRFEPD 231
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
+ +YT L+ G+ L + +M + PDV + I+++A CK K +EA
Sbjct: 232 IKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFN 291
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M + KP + SL++G ++N A + F + +Y+ ++ C +
Sbjct: 292 EMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQ 351
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
++DA +M + + PN TY ++ L + R +A+E+ M P V TY
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYE 408
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
++ C +D AI + +MK +G+LP ++ ++ L+ LC +L +A E F ++L
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDV 468
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
G ++ + L +G D+ L+ KM+
Sbjct: 469 GIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 16/319 (5%)
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
Y LI + Q K L++ M K + TF+++ + KVKEA M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSK-ETFALISRRYARARKVKEAIGAFHKME 189
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
+ G K + ++ ++D V A+ +F+ M + PD++SY+I++ G +
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ----- 244
Query: 253 DALNLFK------QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
LNL + +M E P+VV Y +I+ CK+ + +A NEM R P+
Sbjct: 245 -ELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPH 303
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
+ SL++ L +++A+ ++ K G TY L+ C R++DA + ++
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM 363
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
+KG + RTY I+++ L + EA + M C P TYEI++ K
Sbjct: 364 RLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERL 420
Query: 427 DKAEKLLRQMIARGLLTGL 445
D A K+ +M +G+L G+
Sbjct: 421 DMAIKIWDEMKGKGVLPGM 439
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 21/323 (6%)
Query: 9 EFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNI 68
+FN+ +L K+++ A + +M +R PD+ ++ IL+ + GQ + V
Sbjct: 199 DFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGW---GQELNLLRV---- 251
Query: 69 FKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
D + N +K +G +PDVV Y II++ CK K +A ++EM + P
Sbjct: 252 -------DEV--NREMKDEG--FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 300
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
+ +LI+G +L +A+ + + T++ LV A C ++++A +
Sbjct: 301 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
M G P+ TY ++ + +A +++ TM+ P V +Y IM+ C
Sbjct: 361 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNK 417
Query: 249 KMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 308
+ +D A+ ++ +M + + P + +SSLI LC ++ +A E NEM G+ P +
Sbjct: 418 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 477
Query: 309 SSLLDALCKNHHVDNAISLIKKM 331
S L L D L+ KM
Sbjct: 478 SRLKQTLLDEGRKDKVTDLVVKM 500
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 96/242 (39%), Gaps = 20/242 (8%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ + + K K Y AI +M+ R P F LIN ++ A
Sbjct: 265 PDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 324
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
G+ + T+N ++ +++ K P+ Y I+ L +
Sbjct: 325 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +AY +Y M P V TY ++ FC +L A+ + ++M K + P ++
Sbjct: 385 MQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 441
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
FS L+ ALC E K+ EA M+ G +P +S L +K D+ M
Sbjct: 442 FSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Query: 228 RM 229
R+
Sbjct: 502 RL 503
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 176/353 (49%), Gaps = 8/353 (2%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ-LKEAVGL 152
DV +Y+ I L + +DA+ +Y M + PD VT LI+ G+ KE +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+M K + F LV + C EG +EA + M K G + + + Y++LMD Y
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
N + + E +F M L P +Y+I+++ + D L ++M + PNV +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 273 YSSLIDGLCKSGRISD-AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
Y+ LI ++ ++SD A + M GL P+ +Y++L+ A + + A + ++M
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLL---IKGYNLDVRTYTIMINGLCKD 388
+GI P+V TYT +LD + G E+++ +L IKG + TY +++G K
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRI---TYNTLLDGFAKQ 568
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
GL+ EA ++S+ G P+ +TY +++ A + G + K +LL++M A L
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 2/350 (0%)
Query: 93 PDVVMYSTIIDSLCK-DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
PD V + +I +L K + + + ++ +M K + + L+ FC G +EA+
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+ +M K I + ++ L+DA K ++E + + M G KP TY+ LMD Y
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK-MVDDALNLFKQMHTENITPNV 270
+ + E + M + L P+V+SY+ +I+ + K M D A + F +M + P+
Sbjct: 426 RRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
+Y++LI SG A+ EM G+ P+V TY+S+LDA ++ + + K
Sbjct: 486 HSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
M + I TY LLDG K G +A++V + G V TY +++N + G
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+ L+ +M P+++TY +IYA + D +A + M+ G
Sbjct: 606 DAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 182/406 (44%), Gaps = 18/406 (4%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N + L ++ Y A + + MD V PD T ILI G+ SA V IF
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGR--SAKEV-WEIF 332
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
++ + +G DV + ++ S C + L +A + +EM K I +
Sbjct: 333 EK------------MSEKGVKWSQDV--FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSN 378
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
+ Y TL+ + ++E GL +M K + P T++IL+DA + + + +L
Sbjct: 379 TIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLR 438
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNK-AEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
M G +P+V +Y+ L+ Y +++ A D F M ++ L P SY+ +I+
Sbjct: 439 EMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 249 KMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 308
+ A F++M E I P+V TY+S++D +SG E+ M + ITY
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
++LLD K A ++ + G+ P+V TY +L++ +GG+ ++ +++
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA 618
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYE 414
D TY+ MI + F A M +G P+ +YE
Sbjct: 619 LNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYE 664
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 136/304 (44%), Gaps = 18/304 (5%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+ + +M+ + + + +N L++ Y I + + +G +P T+N ++
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 86 IQGKLAQPDVV-----------------MYSTIIDSLCKDKLVND-AYNLYSEMLAKRIS 127
+ QPD+V Y+ +I + + K ++D A + + M +
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
P +YT LI + + G ++A +M + I P V T++ ++DA + G + +
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
+M++ K +TY++L+DG+ +A D+ + ++M L P V +Y++++N +
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 248 IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
L K+M N+ P+ +TYS++I + A+ M G P+ +
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRS 662
Query: 308 YSSL 311
Y L
Sbjct: 663 YEKL 666
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 18/287 (6%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
I +N + K+ H L +M + + P T+NIL++ Y Q ++L
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQ------------------PDVVMYSTIIDSLCKDK 109
+ G +P+ ++ +I G+ + P Y+ +I +
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
AY + EM + I P V TYT+++ F G + + + M+ + I T++
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L+D K+G EA++V++ K G +P V+TY+ LM+ Y + K + M +
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
L PD +YS MI +++ A K M P+ +Y L
Sbjct: 620 NLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 154/310 (49%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P V + + SL V+ A Y EM +ISP+ T ++SG+C G+L + + L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L M +++ L+ C++G + A + +M K G +P+VVT+++L+ G+C
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
++ +A +F M + +AP+ +Y+ +ING + + A ++ M I +++T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y++LI GLCK + A + V E+ L PN T+S+L+ C + D L K M
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
G PN T+ +L+ C+ A +V ++++ + LD RT + NGL G
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Query: 393 EALALMSKME 402
L+ +ME
Sbjct: 501 LVKKLLQEME 510
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 182/365 (49%), Gaps = 12/365 (3%)
Query: 94 DVVMYS--------TIIDSLCKD----KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC 141
D ++YS + DSL K K +A + + +M P V + +S
Sbjct: 155 DALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLL 214
Query: 142 IVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
G++ A+ +M I+P+ YT ++++ C+ GK+ + +L M + G + V
Sbjct: 215 GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
+Y++L+ G+C ++ A + N M + L P+V +++ +I+G C+ + +A +F +M
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
N+ PN VTY++LI+G + G A+ +M G+ +++TY++L+ LCK
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
A +K++ + ++PN T++ L+ G C E+++ ++ G + + +T+ ++
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ C++ FD A ++ +M ++ T + L +G + +KLL++M +
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Query: 442 LTGLF 446
L F
Sbjct: 515 LQESF 519
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 158/312 (50%), Gaps = 17/312 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + N + +SL+ A+ ++M ++ P+ +T N++++ YC G++ +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 65 LCNIFKRGYQPDTITFNTII----------------KIQGKLA-QPDVVMYSTIIDSLCK 107
L ++ + G++ +++NT+I + GK QP+VV ++T+I C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +A ++ EM A ++P+ VTY TLI+G+ G + A MV I D+ T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+ LCK+ K ++A + + K P+ T+S+L+ G C+ ++ +++ +M
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
R P+ Q+++++++ C+ + D A + ++M +I + T + +GL G+
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Query: 288 DAWELVNEMHSR 299
+L+ EM +
Sbjct: 501 LVKKLLQEMEGK 512
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 18/188 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + +N + + A + M + D+ T+N LI C + A
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ + K P++ TF+ +I Q C K + + LY M+
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQ------------------CVRKNADRGFELYKSMIR 441
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
P+ T+ L+S FC A +L +MV +SI D T + + L +GK +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 184 AKNVLAVM 191
K +L M
Sbjct: 502 VKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 154/310 (49%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P V + + SL V+ A Y EM +ISP+ T ++SG+C G+L + + L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L M +++ L+ C++G + A + +M K G +P+VVT+++L+ G+C
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
++ +A +F M + +AP+ +Y+ +ING + + A ++ M I +++T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y++LI GLCK + A + V E+ L PN T+S+L+ C + D L K M
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
G PN T+ +L+ C+ A +V ++++ + LD RT + NGL G
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Query: 393 EALALMSKME 402
L+ +ME
Sbjct: 501 LVKKLLQEME 510
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 182/365 (49%), Gaps = 12/365 (3%)
Query: 94 DVVMYS--------TIIDSLCKD----KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC 141
D ++YS + DSL K K +A + + +M P V + +S
Sbjct: 155 DALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLL 214
Query: 142 IVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
G++ A+ +M I+P+ YT ++++ C+ GK+ + +L M + G + V
Sbjct: 215 GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
+Y++L+ G+C ++ A + N M + L P+V +++ +I+G C+ + +A +F +M
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
N+ PN VTY++LI+G + G A+ +M G+ +++TY++L+ LCK
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
A +K++ + ++PN T++ L+ G C E+++ ++ G + + +T+ ++
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ C++ FD A ++ +M ++ T + L +G + +KLL++M +
Sbjct: 455 VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Query: 442 LTGLF 446
L F
Sbjct: 515 LQESF 519
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 158/312 (50%), Gaps = 17/312 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + N + +SL+ A+ ++M ++ P+ +T N++++ YC G++ +
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 65 LCNIFKRGYQPDTITFNTII----------------KIQGKLA-QPDVVMYSTIIDSLCK 107
L ++ + G++ +++NT+I + GK QP+VV ++T+I C+
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +A ++ EM A ++P+ VTY TLI+G+ G + A MV I D+ T
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+ LCK+ K ++A + + K P+ T+S+L+ G C+ ++ +++ +M
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
R P+ Q+++++++ C+ + D A + ++M +I + T + +GL G+
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQ 500
Query: 288 DAWELVNEMHSR 299
+L+ EM +
Sbjct: 501 LVKKLLQEMEGK 512
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 18/188 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + +N + + A + M + D+ T+N LI C + A
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ + K P++ TF+ +I Q C K + + LY M+
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQ------------------CVRKNADRGFELYKSMIR 441
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
P+ T+ L+S FC A +L +MV +SI D T + + L +GK +
Sbjct: 442 SGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQL 501
Query: 184 AKNVLAVM 191
K +L M
Sbjct: 502 VKKLLQEM 509
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 176/350 (50%), Gaps = 3/350 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+ V Y +I+S K + ++L + M K++ +V T+ ++ + ++ EA+
Sbjct: 131 EHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIY 189
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
N M + P++ F+ L+ ALCK V++A+ V M + PD TYS L++G+
Sbjct: 190 AFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWG 248
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+ KA ++F M PD+ +YSIM++ LCK VD+AL + + M P
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
YS L+ R+ +A + EM G+ +V ++SL+ A CK + + N ++K+M
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
K +G+ PN + I+L L + G +A +VF+ + IK D TYT++I C+
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEM 427
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ A + M G P+ T+ ++I L ++ KA LL +MI G+
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 167/320 (52%), Gaps = 2/320 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+V + ++ + + V++A ++ M + P++V + L+S C +++A +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
M PD T+SIL++ KE + +A+ V MI G PD+VTYS ++D C
Sbjct: 227 ENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
V++A I +M P YS++++ +++A++ F +M + +V +
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+SLI CK+ R+ + + ++ EM S+G+ PN + + +L L + D A + +KM
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-I 404
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
+ P+ TYT+++ C+ ++ A +V++ + KG + T++++INGLC++ +
Sbjct: 405 KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQK 464
Query: 394 ALALMSKMEDNGCTPNAVTY 413
A L+ +M + G P+ VT+
Sbjct: 465 ACVLLEEMIEMGIRPSGVTF 484
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 156/316 (49%), Gaps = 3/316 (0%)
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V Y +I + Q K L+N M K + +V TF I++ + KV EA
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
VM K P++V ++ L+ C V KA+++F M R PD ++YSI++ G K
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEP 251
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ A +F++M P++VTYS ++D LCK+GR+ +A +V M P YS
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
L+ + ++ A+ +M+ G+ +V + L+ CK R+K+ V +++ K
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G + ++ I++ L + G DEA + KM C P+A TY ++I +K + + A
Sbjct: 372 GVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETA 430
Query: 430 EKLLRQMIARGLLTGL 445
+K+ + M +G+ +
Sbjct: 431 DKVWKYMRKKGVFPSM 446
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 20/327 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ FN ++L K+K+ A + + M R PD T++IL+ + + A V
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ G PD+V YS ++D LCK V++A + M
Sbjct: 260 FREMIDAG------------------CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPS 301
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
P Y+ L+ + +L+EAV +M + DV F+ L+ A CK ++K
Sbjct: 302 ICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNV 361
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
VL M G P+ + + ++ E ++A D+F M ++ PD +Y+++I
Sbjct: 362 YRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKM 420
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
C+ K ++ A ++K M + + P++ T+S LI+GLC+ A L+ EM G+ P+
Sbjct: 421 FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPS 480
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKM 331
+T+ L L K D L +KM
Sbjct: 481 GVTFGRLRQLLIKEEREDVLKFLNEKM 507
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 23/199 (11%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+ +M+ + D+ FN LI +C ++ + + VL + +G P++ + N I++
Sbjct: 326 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 86 I---QG-------------KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+G K+ +PD Y+ +I C+ K + A ++ M K + P
Sbjct: 386 HLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
+ T++ LI+G C ++A LL +M+ I P TF L L KE E ++VL
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKE----EREDVLK 501
Query: 190 VMIKGGEKPDVVTYSSLMD 208
+ EK +V+ L D
Sbjct: 502 FL---NEKMNVLVNEPLCD 517
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 198/436 (45%), Gaps = 38/436 (8%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTIT----------------FNTII 84
D FT ++ YC+ G+ A SV I RG+ + I+ F I
Sbjct: 213 DKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIE 272
Query: 85 KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
++ + + + Y +I K+ ++ A+ L+ +M ++ D+ Y LI G C
Sbjct: 273 MLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHK 332
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV-VTY 203
L+ A+ L ++ I PD IL LC + E + V+I +K V + Y
Sbjct: 333 DLEMALSLYLEIKRSGIPPDR---GILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLY 389
Query: 204 SSLMDGYCLVNEVNKAED-IFNTMTRME-----------------LAPDVQSYSIMINGL 245
SL +G+ + V++A I N M E + PD S SI+IN L
Sbjct: 390 KSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCL 449
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
K VD A+ L + + P + Y+++I+G+CK GR ++ +L+ EM G+ P+
Sbjct: 450 VKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQ 509
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
T + + L + A+ L+KKM+ G P + T L+ LC+ GR DA + D
Sbjct: 510 FTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDD 569
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
+ +G+ + T I+GL K+ D L L + NG P+ + Y ++I AL +
Sbjct: 570 VAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACR 629
Query: 426 NDKAEKLLRQMIARGL 441
+A+ L +M+++GL
Sbjct: 630 TMEADILFNEMVSKGL 645
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 181/384 (47%), Gaps = 2/384 (0%)
Query: 58 ITSAFSVLCNIFKRGYQPDTIT-FNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYN 116
+ A+S + N+ Y+ D ++ ++K K PD S +I+ L K V+ A
Sbjct: 402 VHEAYSFIQNLMG-NYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVT 460
Query: 117 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALC 176
L +++ + P + Y +I G C G+ +E++ LL +M + P +T + + L
Sbjct: 461 LLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLA 520
Query: 177 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 236
+ A ++L M G +P + + L+ C A + + +
Sbjct: 521 ERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMV 580
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+ + I+GL K + VD L LF+ + P+V+ Y LI LCK+ R +A L NEM
Sbjct: 581 ASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEM 640
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
S+GL P V TY+S++D CK +D +S I +M P+V TYT L+ GLC GR
Sbjct: 641 VSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRP 700
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
+A + ++ K + T+ +I GLCK G EAL +ME+ P++ Y +
Sbjct: 701 SEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSL 760
Query: 417 IYALFQKGDNDKAEKLLRQMIARG 440
+ + + + + R+M+ +G
Sbjct: 761 VSSFLSSENINAGFGIFREMVHKG 784
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 198/456 (43%), Gaps = 37/456 (8%)
Query: 16 SLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP 75
VK A L ++M + D+ +++LI C + A S+ I + G P
Sbjct: 292 GFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351
Query: 76 DTITFNTII--------------KIQGKLAQPDV-VMYSTIIDSLCKDKLVNDAYNLYSE 120
D ++ I G + + V ++Y ++ + ++ LV++AY+
Sbjct: 352 DRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQN 411
Query: 121 MLA------------------KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN 162
++ K I PD + + +I+ ++ AV LL+ +V +
Sbjct: 412 LMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLI 471
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN--KAE 220
P ++ +++ +CKEG+ +E+ +L M G +P T + + CL + A
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG--CLAERCDFVGAL 529
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
D+ M P ++ + ++ LC+ DA + E ++V ++ IDGL
Sbjct: 530 DLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGL 589
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
K+ + EL ++ + G P+VI Y L+ ALCK A L +M +G+ P V
Sbjct: 590 IKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTV 649
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
TY ++DG CK G + + N DV TYT +I+GLC G EA+ ++
Sbjct: 650 ATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNE 709
Query: 401 MEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
M+ C PN +T+ +I L + G + +A R+M
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREM 745
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 158/349 (45%), Gaps = 30/349 (8%)
Query: 36 RRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDV 95
+ ++PD + +I+INC ++ A ++L +I + G P +
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPM----------------- 475
Query: 96 VMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKE------A 149
MY+ II+ +CK+ ++ L EM + P T CI G L E A
Sbjct: 476 -MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN------CIYGCLAERCDFVGA 528
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
+ LL +M P + + LV LC+ G+ +A L + G +V ++ +DG
Sbjct: 529 LDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG 588
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
V++ ++F + PDV +Y ++I LCK +A LF +M ++ + P
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPT 648
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
V TY+S+IDG CK G I + M+ P+VITY+SL+ LC + AI
Sbjct: 649 VATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWN 708
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
+MK + PN T+ L+ GLCK G +A F+++ K D Y
Sbjct: 709 EMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 17/339 (5%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPD 76
LVK A++L + ++P +N +I C G+ + +L + G +P
Sbjct: 449 LVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 77 TITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYS 119
T N I K++ +P + + ++ LC++ DA
Sbjct: 509 QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLD 568
Query: 120 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG 179
++ + +V T I G + + L + PDV + +L+ ALCK
Sbjct: 569 DVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKAC 628
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
+ EA + M+ G KP V TY+S++DG+C E+++ M E PDV +Y+
Sbjct: 629 RTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYT 688
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+I+GLC +A+ + +M ++ PN +T+ +LI GLCK G +A EM +
Sbjct: 689 SLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK 748
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
+ P+ Y SL+ + + +++ + ++M H+G P
Sbjct: 749 EMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 17/316 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N + K ++ L +M V P FT N + C A +
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 65 LCNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLCK 107
L + G++P ++K + G+ +V + ID L K
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIK 591
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
++ V+ L+ ++ A PDV+ Y LI C + EA L N+MV K + P V T
Sbjct: 592 NEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVAT 651
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ ++D CKEG++ + + M + + PDV+TY+SL+ G C ++A +N M
Sbjct: 652 YNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMK 711
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
+ P+ ++ +I GLCK +AL F++M + + P+ Y SL+ S I+
Sbjct: 712 GKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENIN 771
Query: 288 DAWELVNEMHSRGLPP 303
+ + EM +G P
Sbjct: 772 AGFGIFREMVHKGRFP 787
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 171/409 (41%), Gaps = 31/409 (7%)
Query: 59 TSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLY 118
T + N FKR + + FN K +G + D+ Y+ + L + + L
Sbjct: 73 TKVVETVLNGFKR-WGLAYLFFNWASKQEG--YRNDMYAYNAMASILSRARQNASLKALV 129
Query: 119 SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN-PDVYTFSILVDALCK 177
++L R + I G + EA + +++ + P+ YT++ L++A+ K
Sbjct: 130 VDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISK 189
Query: 178 E--GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT-MTRMELAPD 234
V+ + L M G D T + ++ YC + +A +FN ++R L D
Sbjct: 190 SNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL--D 247
Query: 235 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
+I++ CK VD A L + + +I N TY LI G K RI A++L
Sbjct: 248 EHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFE 307
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
+M G+ ++ Y L+ LCK+ ++ A+SL ++K GI P+ LL +
Sbjct: 308 KMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEES 367
Query: 355 RLKDAQEVF-QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA----LMSKMEDNGCT-- 407
L EV D+ K L Y + G ++ L EA + LM E +G +
Sbjct: 368 ELSRITEVIIGDIDKKSVML---LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEI 424
Query: 408 ------------PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
P++ + I+I L + D A LL ++ GL+ G
Sbjct: 425 VKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPG 473
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
PD+ +++LI C + A I FN ++ K +P V Y+
Sbjct: 612 PDVIAYHVLIKALCKACRTMEA---------------DILFNEMVS---KGLKPTVATYN 653
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
++ID CK+ ++ + M +PDV+TYT+LI G C G+ EA+ N+M K
Sbjct: 654 SMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGK 713
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
P+ TF L+ LCK G EA M + +PD Y SL+ + +N
Sbjct: 714 DCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAG 773
Query: 220 EDIFNTMT---RMELAPDVQSYSIMIN 243
IF M R ++ D ++Y + +N
Sbjct: 774 FGIFREMVHKGRFPVSVD-RNYMLAVN 799
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 55/279 (19%)
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-----------H 262
N+ A+++ TR +PD I+ L K+V+ LN FK+
Sbjct: 40 NQSKLAQNLIVIFTRQPFSPDDPELLILSPEL-NTKVVETVLNGFKRWGLAYLFFNWASK 98
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELV-NEMHSRG-LPPNVITYSSLLDALCKNHH 320
E ++ Y+++ L ++ + + LV + ++SR + P + + L
Sbjct: 99 QEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGF--FIRCLGNAGL 156
Query: 321 VDNAISLIKKMKHQGI-LPNVYTYTILLDGL----------------------------- 350
VD A S+ +++ G+ +PN YTY LL+ +
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 351 --------CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
C G+ + A VF ++L +G+ LD TI++ CK G D+A L+ +E
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLE 275
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ N TY ++I+ ++ DKA +L +M G+
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGM 314
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 187/387 (48%), Gaps = 20/387 (5%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
+ P+ +TFNIL N +C+ L + + G++PD +T+NT+
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL-------------- 277
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
+ S C+ + +A+ LY M +R+ PD+VTYT+LI G C G+++EA ++MV
Sbjct: 278 ----VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
+ I PD +++ L+ A CKEG ++++K +L M+ PD T +++G+ +
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLL 393
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPNVVTYSSL 276
A + + R+++ + +I LC+ A +L ++ E TY++L
Sbjct: 394 SAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNL 453
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I+ L + I +A L ++ ++ + TY +L+ LC+ A SL+ +M +
Sbjct: 454 IESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEV 513
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL-FDEAL 395
P+ + L+ G CK A+ + ++ D +Y ++ +C+ G + +AL
Sbjct: 514 KPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKAL 573
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQ 422
L +M+ G PN +T + +I L Q
Sbjct: 574 ELQERMQRLGFVPNRLTCKYLIQVLEQ 600
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 182/394 (46%), Gaps = 19/394 (4%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
D F++L+ Y LG + F V + G+ +T N ++ KL
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDL-------- 216
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
+ D + +YS M I P+ T+ L + FC +E L +M +
Sbjct: 217 ----------MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEG 266
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
PD+ T++ LV + C+ G++KEA + +M + PD+VTY+SL+ G C V +A
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAH 326
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
F+ M + PD SY+ +I CK M+ + L +M ++ P+ T +++G
Sbjct: 327 QTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPN 339
+ GR+ A V E+ + L+ +LC+ A L+ ++ + +G
Sbjct: 387 VREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAK 446
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
TY L++ L + +++A + L + LD +TY +I LC+ G EA +LM+
Sbjct: 447 PETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMA 506
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
+M D+ P++ ++Y ++ D DKAE+LL
Sbjct: 507 EMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 204/429 (47%), Gaps = 11/429 (2%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
P++ + +L++ + A LC + + + + + ++ D V++
Sbjct: 111 PNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFD 170
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
++ K LV + + ++ E+L S VVT L++G + +++ + + M
Sbjct: 171 MLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRV 230
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
I+P+ YTF+IL + C + +E + L M + G +PD+VTY++L+ YC + +A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
++ M R + PD+ +Y+ +I GLCK V +A F +M I P+ ++Y++LI
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
CK G + + +L++EM + P+ T +++ + + +A++ + +++ +
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
L+ LC+ G+ A+ + ++ +G+ TY +I L + +EAL L
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLK 470
Query: 399 SKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM----------IARGLLTGLFYA 448
K+++ +A TY +I L + G N +AE L+ +M I L+ G
Sbjct: 471 GKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKE 530
Query: 449 TEFEAVEEL 457
+F+ E L
Sbjct: 531 LDFDKAERL 539
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 159/351 (45%), Gaps = 24/351 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P ++ +N +S + A L + M RRV+PDL T+ LI C G++ A
Sbjct: 268 EPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ RG +PD +++NT+I + CK+ ++ + L EML
Sbjct: 328 TFHRMVDRGIKPDCMSYNTLIY------------------AYCKEGMMQQSKKLLHEMLG 369
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ PD T ++ GF G+L AV + ++ ++ L+ +LC+EGK
Sbjct: 370 NSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFA 429
Query: 184 AKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
AK++L +I + G + TY++L++ + + +A + + D ++Y +I
Sbjct: 430 AKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALI 489
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN--EMHSRG 300
LC+I +A +L +M + P+ +L+ G CK A L++ M R
Sbjct: 490 GCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRI 549
Query: 301 LPPNVITYSSLLDALCKNH-HVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
P +Y+SL+ A+C+ A+ L ++M+ G +PN T L+ L
Sbjct: 550 FDPE--SYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 225/512 (43%), Gaps = 88/512 (17%)
Query: 13 FFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRG 72
F L + Y+ A L ++ + + D+ + +++ Y G+ A + + + G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 73 YQPDTITFNTIIKIQGKLAQP------------------DVVMYSTIIDSLCKDKLVNDA 114
P +T+N I+ + GK+ + D ST++ + ++ L+ +A
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
++E+ + P VTY L+ F G EA+ +L +M S D T++ LV A
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA 360
Query: 175 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 234
+ G KEA V+ +M K G P+ +TY++++D Y + ++A +F +M P+
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
Query: 235 VQSYSIMI---------------------NG-------------LCKIKMVDDALN-LFK 259
+Y+ ++ NG LC K +D +N +F+
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
+M + P+ T+++LI + G DA ++ EM G V TY++LL+AL +
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG----------RLKDAQEVFQDLLIK 369
+ ++I MK +G P +Y+++L KGG R+K+ Q +L++
Sbjct: 541 DWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLR 600
Query: 370 -------------------------GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
GY D+ + M++ ++ ++D+A ++ + ++
Sbjct: 601 TLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED 660
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
G +P+ VTY ++ ++G+ KAE++L+ +
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 205/440 (46%), Gaps = 19/440 (4%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
+ +N+ + V+ A + + M + VMP+ T+ +I+ Y G+ A + +
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKL 110
+ + G P+T T+N ++ + GK ++ P+ ++T++ +LC +K
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKG 470
Query: 111 VNDAYN-LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
++ N ++ EM + PD T+ TLIS + G +A + +M N V T++
Sbjct: 471 MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYN 530
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L++AL ++G + +NV++ M G KP +YS ++ Y E I N +
Sbjct: 531 ALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEG 590
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
++ P ++ K + + + F P++V ++S++ ++ A
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
++ + GL P+++TY+SL+D + A ++K ++ + P++ +Y ++ G
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 710
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
C+ G +++A + ++ +G + TY ++G G+F E ++ M N C PN
Sbjct: 711 FCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPN 770
Query: 410 AVTYEIIIYALFQKGDNDKA 429
+T+++++ + G +A
Sbjct: 771 ELTFKMVVDGYCRAGKYSEA 790
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 1/349 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ-LKEAVGL 152
DV Y+TI+ + + A +L+ M SP +VTY ++ F +G+ ++ +G+
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L++M K + D +T S ++ A +EG ++EAK A + G +P VTY++L+ +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+A + M D +Y+ ++ + +A + + M + + PN +T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y+++ID K+G+ +A +L M G PN TY+++L L K + I ++ MK
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
G PN T+ +L G K VF+++ G+ D T+ +I+ + G
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+A + +M G TY ++ AL +KGD E ++ M ++G
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 162/380 (42%), Gaps = 52/380 (13%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +N + L K I + M P+ T+N ++ + G V
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 478
Query: 65 LCNIFKRGYQPDTITFNTII-------------KIQGKLAQPD----VVMYSTIIDSLCK 107
+ G++PD TFNT+I K+ G++ + V Y+ ++++L +
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC----------IVGQLKEAVGLLNQMV 157
N+ S+M +K P +Y+ ++ + I ++KE + M+
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 158 LKSI-------------------------NPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
L+++ PD+ F+ ++ + +A+ +L +
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
+ G PD+VTY+SLMD Y E KAE+I T+ + +L PD+ SY+ +I G C+ ++
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
+A+ + +M I P + TY++ + G G ++ +++ M PN +T+ ++
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Query: 313 DALCKNHHVDNAISLIKKMK 332
D C+ A+ + K+K
Sbjct: 779 DGYCRAGKYSEAMDFVSKIK 798
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 17/185 (9%)
Query: 70 KRGYQPDTITFNTIIKI----------QGKLAQ-------PDVVMYSTIIDSLCKDKLVN 112
K GY+PD + FN+++ I +G L PD+V Y++++D +
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
A + + ++ PD+V+Y T+I GFC G ++EAV +L++M + I P ++T++ V
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFV 743
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
G E ++V+ M K +P+ +T+ ++DGYC + ++A D + + +
Sbjct: 744 SGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPC 803
Query: 233 PDVQS 237
D QS
Sbjct: 804 FDDQS 808
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/276 (17%), Positives = 132/276 (47%), Gaps = 21/276 (7%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCH------------ 54
+ +N +L + + + ++ M + P ++++++ CY
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 55 ---LGQITSAFSVLCNIFKRGYQPDTITFN----TIIKIQGKLAQPDVVMYSTIIDSLCK 107
GQI ++ +L + ++ + + T+ K G +PD+V++++++ +
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG--YKPDMVIFNSMLSIFTR 643
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ + + A + + +SPD+VTY +L+ + G+ +A +L + + PD+ +
Sbjct: 644 NNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVS 703
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ ++ C+ G ++EA +L+ M + G +P + TY++ + GY + + ED+ M
Sbjct: 704 YNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+ + P+ ++ ++++G C+ +A++ ++ T
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
D Q I + L + A L ++ + +V Y++++ ++G+ A +L
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 294 NEMHSRGLPPNVITYSSLLDALCK-NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
M G P ++TY+ +LD K + ++ +M+ +G+ + +T + +L +
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
G L++A+E F +L GY TY ++ K G++ EAL+++ +ME+N C ++VT
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMIARGLL-TGLFYATEFEA 453
Y ++ A + G + +A ++ M +G++ + Y T +A
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ +N V+ A + + ++ ++ PDL ++N +I +C G + A
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVR 722
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+L + +RG +P T+NT + G A +I+ + K ND
Sbjct: 723 MLSEMTERGIRPCIFTYNTF--VSGYTAMGMFAEIEDVIECMAK----NDC--------- 767
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
P+ +T+ ++ G+C G+ EA+ +++ +K+ +P
Sbjct: 768 ---RPNELTFKMVVDGYCRAGKYSEAMDFVSK--IKTFDP 802
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 168/327 (51%), Gaps = 5/327 (1%)
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRI---SPDVVTYTTLISGFCIVGQLKEAVGLL 153
++ + ID+ C+ + ++ A + M KR+ P+V Y T+++G+ G + +A+
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+M + PDV TF+IL++ C+ K A ++ M + G +P+VV++++L+ G+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
++ + + M + + I+++GLC+ VDDA L + + + P+ Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
SL++ LC + A E++ E+ +G P I ++L++ L K+ + A ++KM +
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
GILP+ T+ +LL LC DA + KGY D TY ++++G K+G E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYAL 420
L+++M D P+ TY ++ L
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 6/340 (1%)
Query: 60 SAFSVLCNIFKRGYQPDTITFNTIIK-IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLY 118
SA C K Y + F+T+ + I GK P+V +Y+T+++ K ++ A Y
Sbjct: 162 SAIDAYCRARKMDYA--LLAFDTMKRLIDGK---PNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 119 SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKE 178
M +R PDV T+ LI+G+C + A+ L +M K P+V +F+ L+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 179 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 238
GK++E + MI+ G + T L+DG C V+ A + + + P Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 239 SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS 298
++ LC A+ + +++ + TP + ++L++GL KSGR A + +M +
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 299 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
G+ P+ +T++ LL LC + H +A L +G P+ TY +L+ G K GR K+
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
+ + ++L K D+ TY +++GL G F M
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVRM 496
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 144/268 (53%), Gaps = 5/268 (1%)
Query: 168 FSILVDALCKEGKVKEAK---NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
F +DA C+ K+ A + + +I G KP+V Y+++++GY +++KA +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M + PDV +++I+ING C+ D AL+LF++M + PNVV++++LI G SG
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+I + ++ EM G + T L+D LC+ VD+A L+ + ++ +LP+ + Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
L++ LC + A E+ ++L KG T ++ GL K G ++A M KM +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKL 432
G P++VT+ +++ L + A +L
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRL 425
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 152/321 (47%), Gaps = 18/321 (5%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
P++ +N ++N Y G + A R YQ ++ + A+PDV ++
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKAL--------RFYQ----------RMGKERAKPDVCTFN 232
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
+I+ C+ + A +L+ EM K P+VV++ TLI GF G+++E V + +M+
Sbjct: 233 ILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIEL 292
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
T ILVD LC+EG+V +A ++ ++ P Y SL++ C N+ +A
Sbjct: 293 GCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRA 352
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
++ + + P + + ++ GL K + A ++M I P+ VT++ L+
Sbjct: 353 MEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRD 412
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
LC S +DA L S+G P+ TY L+ K L+ +M + +LP+
Sbjct: 413 LCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD 472
Query: 340 VYTYTILLDGLCKGGRLKDAQ 360
++TY L+DGL G+ Q
Sbjct: 473 IFTYNRLMDGLSCTGKFSRKQ 493
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 142/300 (47%), Gaps = 17/300 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N VK+ A+ Q+M R PD+ TFNILIN YC + A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQPDVVMYSTI--------------IDSLCK 107
+ ++G +P+ ++FNT+I+ GK+ + + Y I +D LC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ V+DA L ++L KR+ P Y +L+ C + A+ ++ ++ K P
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ LV+ L K G+ ++A + M+ G PD VT++ L+ C + A + +
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
PD +Y ++++G K + L +M +++ P++ TY+ L+DGL +G+ S
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 18/181 (9%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ L A+ + +++ + P L+ G+ A
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ + G PD++TFN +++ LC DA L +K
Sbjct: 391 MEKMMNAGILPDSVTFNLLLR------------------DLCSSDHSTDANRLRLLASSK 432
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
PD TY L+SGF G+ KE L+N+M+ K + PD++T++ L+D L GK
Sbjct: 433 GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRK 492
Query: 185 K 185
+
Sbjct: 493 Q 493
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 171/361 (47%), Gaps = 17/361 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P +E+ + SL K Y + + +QM + T +I Y G + A
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+ FN + K G Q V +Y++++ +LC K+ + AY L M+
Sbjct: 168 L---------------FNGVPKTLG--CQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR 210
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K + PD TY L++G+C G++KEA L++M + NP +L++ L G ++
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
AK +++ M KGG PD+ T++ L++ EV +++ T ++ L D+ +Y +I
Sbjct: 271 AKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIP 330
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
+ KI +D+A L + P Y+ +I G+C++G DA+ ++M + PP
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPP 390
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
N Y+ L+ + +A + + +M G++P + ++ DGL GG+ A +
Sbjct: 391 NRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIE 450
Query: 364 Q 364
Q
Sbjct: 451 Q 451
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 147/300 (49%), Gaps = 5/300 (1%)
Query: 101 IIDSLCKDKLVNDAYNLYS---EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
II+ K+ V+ A L++ + L + + DV Y +L+ C V A L+ +M+
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV--YNSLLHALCDVKMFHGAYALIRRMI 209
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
K + PD T++ILV+ C GK+KEA+ L M + G P L++G +
Sbjct: 210 RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE 269
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A+++ + MT+ PD+Q+++I+I + K V+ + ++ + ++ TY +LI
Sbjct: 270 SAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLI 329
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
+ K G+I +A+ L+N G P Y+ ++ +C+N D+A S MK +
Sbjct: 330 PAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
PN YT+L+ +GG+ DA ++ G R + ++ +GL G D A+ +
Sbjct: 390 PNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 161/344 (46%), Gaps = 7/344 (2%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT--LISGFCIVGQLKEAV 150
P + Y + SL K + + +M K +S D+ T +I + G + +AV
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQM--KDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 151 GLLNQMVLKSI--NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
L N V K++ V ++ L+ ALC A ++ MI+ G KPD TY+ L++
Sbjct: 167 ELFNG-VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVN 225
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
G+C ++ +A++ + M+R P + ++I GL ++ A + +M P
Sbjct: 226 GWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
++ T++ LI+ + KSG + E+ GL ++ TY +L+ A+ K +D A L+
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
G P Y ++ G+C+ G DA F D+ +K + + YT++I +
Sbjct: 346 NNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRG 405
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKL 432
G F +A + +M + G P + ++++ L G +D A ++
Sbjct: 406 GKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 146/317 (46%), Gaps = 1/317 (0%)
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
+P + Y L + + +L QM S++ T +++ K G V +A
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 187 VLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
+ + K G + V Y+SL+ C V + A + M R L PD ++Y+I++NG
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
C + +A +M P LI+GL +G + A E+V++M G P++
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
T++ L++A+ K+ V+ I + G+ ++ TY L+ + K G++ +A + +
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
+ G+ Y +I G+C++G+FD+A + S M+ PN Y ++I + G
Sbjct: 348 CVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGK 407
Query: 426 NDKAEKLLRQMIARGLL 442
A L +M GL+
Sbjct: 408 FVDAANYLVEMTEMGLV 424
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 1/341 (0%)
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
++ + + + L ++A ++ M+ I P V L+ C + A +
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
I P T+SILV + A+ V M++ D++ Y++L+D C +V
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+ +F M + L PD S++I I+ C V A + +M ++ PNV T++ +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
I LCK+ ++ DA+ L++EM +G P+ TY+S++ C + V+ A L+ +M
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC-KDGLFDEAL 395
LP+ +TY ++L L + GR A E+++ + + + V TYT+MI+GL K G +EA
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
M D G P + T E++ L G D + L +M
Sbjct: 440 RYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 187/410 (45%), Gaps = 30/410 (7%)
Query: 59 TSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPD------VVMYSTIIDSLCKDKLVN 112
+ +F + + PD + N I ++ P +V YS + S ++++
Sbjct: 19 SQSFRIFSTLLHDPPSPDLV--NEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLK 76
Query: 113 DAYNL----YSEMLAKRISPDVV----TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
NL + L R PD +Y L+ I+G K+ LL ++++ +
Sbjct: 77 RCKNLGFPAHRFFLWARRIPDFAHSLESYHILVE---ILGSSKQ-FALLWDFLIEAREYN 132
Query: 165 VY-----TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
+ F I+ A + EA M++ G KP V L+ C VN A
Sbjct: 133 YFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHA 192
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
++ F + P ++YSI++ G +I+ A +F +M N +++ Y++L+D
Sbjct: 193 QEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDA 252
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
LCKSG + +++ EM + GL P+ +++ + A C V +A ++ +MK ++PN
Sbjct: 253 LCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN 312
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
VYT+ ++ LCK ++ DA + +++ KG N D TY ++ C + A L+S
Sbjct: 313 VYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLS 372
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
+M+ C P+ TY +++ L + G D+A ++ M R FY T
Sbjct: 373 RMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERK-----FYPT 417
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 177/378 (46%), Gaps = 7/378 (1%)
Query: 42 LFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTI--TFNTIIKIQGKLAQPDVVMYS 99
L+ F I Y + + F ++ + R P FN +++ K P V
Sbjct: 121 LWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIK---PCVDDLD 177
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
++ SLC K VN A + + I P TY+ L+ G+ + A + ++M+ +
Sbjct: 178 QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLER 237
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
+ D+ ++ L+DALCK G V + M G KPD +++ + YC +V+ A
Sbjct: 238 NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
+ + M R +L P+V +++ +I LCK + VDDA L +M + P+ TY+S++
Sbjct: 298 YKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAY 357
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
C ++ A +L++ M P+ TY+ +L L + D A + + M + P
Sbjct: 358 HCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPT 417
Query: 340 VYTYTILLDGLC-KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
V TYT+++ GL K G+L++A F+ ++ +G T ++ N L G D L
Sbjct: 418 VATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLA 477
Query: 399 SKME-DNGCTPNAVTYEI 415
KME + C+ + E+
Sbjct: 478 GKMERSSSCSVQDMAVEM 495
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 156/329 (47%), Gaps = 19/329 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + ++ SL KH A + ++P T++IL+ + + + A V
Sbjct: 171 PCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKV 230
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ +R N ++ D++ Y+ ++D+LCK V+ Y ++ EM
Sbjct: 231 FDEMLER---------NCVV---------DLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ PD ++ I +C G + A +L++M + P+VYTF+ ++ LCK KV +A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+L MI+ G PD TY+S+M +C EVN+A + + M R + PD +Y++++
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC-KSGRISDAWELVNEMHSRGLPP 303
L +I D A +++ M P V TY+ +I GL K G++ +A M G+PP
Sbjct: 393 LIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMK 332
T L + L +D L KM+
Sbjct: 453 YSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 149/284 (52%), Gaps = 4/284 (1%)
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ P++ + L+ C G +KE LL +M + + PD TF++L C+ K+A
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKA 287
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM-TRMEL--APDVQSYSIM 241
+L MI+ G KP+ TY + +D +C V++A D+F+ M T+ AP +++++M
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
I L K ++ L +M + P+V TY +I+G+C + ++ +A++ ++EM ++G
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE 361
PP+++TY+ L LC+N D A+ L +M P+V TY +L+ + A
Sbjct: 408 PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 362 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
+ ++ + DV TY MINGL EA L+ ++ + G
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKG 511
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 148/301 (49%), Gaps = 4/301 (1%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
QP++ ++ ++D+LCK LV + L M R+ PD T+ L G+C V K+A+
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
LL +M+ P+ +T+ +D C+ G V EA ++ MI G T +
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 212 LVNEVNKAEDIFNTMTRM---ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
+ + +KAE+ F + RM PDV +Y +I G+C + VD+A +M + P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
++VTY+ + LC++ + +A +L M P+V TY+ L+ + D A +
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
+M + + +V TY +++GL R K+A + ++++ KG L R + + L +
Sbjct: 470 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEV 529
Query: 389 G 389
G
Sbjct: 530 G 530
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 146/296 (49%), Gaps = 18/296 (6%)
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
I+ +P++ ++ L+D C V + E + M R + PD +++++ G C+++
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDP 284
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP---PNVITY 308
A+ L ++M P TY + ID C++G + +A +L + M ++G P T+
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
+ ++ AL KN + LI +M G LP+V TY +++G+C ++ +A + ++
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
KGY D+ TY + LC++ DEAL L +M ++ C P+ TY ++I F+ D D
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 429 AEKLLRQMIAR----------GLLTGLFYATEFEA----VEELSAPGLRSPVRVED 470
A +M R ++ GLF + +EE+ GL+ P RV D
Sbjct: 465 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFD 520
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 153/339 (45%), Gaps = 23/339 (6%)
Query: 37 RVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVV 96
+ P++ FN+L++ C G + ++L + R +PD TFN + ++ P
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKA 287
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
M L EM+ P+ TY I FC G + EA L + M
Sbjct: 288 M------------------KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329
Query: 157 VLKSIN---PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+ K P TF++++ AL K K +E ++ MI G PDV TY +++G C+
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+V++A + M+ PD+ +Y+ + LC+ + D+AL L+ +M P+V TY
Sbjct: 390 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTY 449
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+ LI + A+ EM R +V TY ++++ L H A L++++ +
Sbjct: 450 NMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVN 509
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 372
+G+ + L L + G LK +V + + K YN
Sbjct: 510 KGLKLPYRVFDSFLMRLSEVGNLKAIHKV-SEHMKKFYN 547
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 126/285 (44%), Gaps = 15/285 (5%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P FN F + + A+ L ++M P+ FT+ I+ +C G + A
Sbjct: 263 RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEA 322
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+ F+ +I ++ P ++ +I +L K+ + + L M
Sbjct: 323 ADL---------------FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRM 367
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
++ PDV TY +I G C+ ++ EA L++M K PD+ T++ + LC+ K
Sbjct: 368 ISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKT 427
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
EA + M++ P V TY+ L+ + +++ + A + + M + + DV++Y M
Sbjct: 428 DEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAM 487
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
INGL +A L +++ + + + S + L + G +
Sbjct: 488 INGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNL 532
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 198/430 (46%), Gaps = 57/430 (13%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPD-------LFTFNILINCYCHLGQITSAF 62
F+ SL K + + A SL F RV D TF +LI Y G + A
Sbjct: 138 FDSVVNSLCKAREFEIAWSLV----FDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAI 193
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
F R Y+P + K + ++ + ++D+LCK+ V +A ++Y E +
Sbjct: 194 RAF--EFARSYEP-------VCK-----SATELRLLEVLLDALCKEGHVREA-SMYLERI 238
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
+ + V P V F+IL++ + K+K
Sbjct: 239 GGTMDSNWV-------------------------------PSVRIFNILLNGWFRSRKLK 267
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
+A+ + M KP VVTY +L++GYC + V A ++ M E+ + ++ +I
Sbjct: 268 QAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPII 327
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
+GL + + +AL + ++ P +VTY+SL+ CK+G + A +++ M +RG+
Sbjct: 328 DGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVD 387
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P TY+ K++ + ++L K+ G P+ TY ++L LC+ G+L A +V
Sbjct: 388 PTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQV 447
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
+++ +G + D+ T T++I+ LC+ + +EA G P +T+++I L
Sbjct: 448 NKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRS 507
Query: 423 KGDNDKAEKL 432
KG +D A++L
Sbjct: 508 KGMSDMAKRL 517
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 184/359 (51%), Gaps = 16/359 (4%)
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVV---TYTTLISGFCIVGQLKEAVGLL 153
++ ++++SLCK + A++L + + ++V T+ LI + G +++A+
Sbjct: 137 LFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF 196
Query: 154 N-----QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK-----PDVVTY 203
+ V KS ++ +L+DALCKEG V+EA L + GG P V +
Sbjct: 197 EFARSYEPVCKSAT-ELRLLEVLLDALCKEGHVREASMYLERI--GGTMDSNWVPSVRIF 253
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+ L++G+ ++ +AE ++ M M + P V +Y +I G C+++ V A+ + ++M
Sbjct: 254 NILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKM 313
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
+ N + ++ +IDGL ++GR+S+A ++ P ++TY+SL+ CK +
Sbjct: 314 AEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPG 373
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
A ++K M +G+ P TY K + ++ ++ L+ G++ D TY +++
Sbjct: 374 ASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILK 433
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
LC+DG A+ + +M++ G P+ +T ++I+ L + ++A + + RG++
Sbjct: 434 MLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGII 492
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 141/316 (44%), Gaps = 29/316 (9%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + FN +++ A L ++M V P + T+ LI YC + ++ A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDV--VMYSTIIDSLCKDKLVNDAYNLYSEML 122
L + K+A+ ++ ++++ IID L + +++A +
Sbjct: 308 LEEM--------------------KMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFF 347
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
P +VTY +L+ FC G L A +L M+ + ++P T++ K K +
Sbjct: 348 VCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTE 407
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
E N+ +I+ G PD +TY ++ C +++ A + M + PD+ + +++I
Sbjct: 408 EGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM----HS 298
+ LC+++M+++A F I P +T+ + +GL G A L + M HS
Sbjct: 468 HLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHS 527
Query: 299 RGLPPNVITYSSLLDA 314
+ LP TY +DA
Sbjct: 528 KKLPN---TYREAVDA 540
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 209/438 (47%), Gaps = 27/438 (6%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
N F L+ + ++MD + ++ TFN++I +C ++ A SV +
Sbjct: 186 LNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRML 245
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM---LAKRI 126
K G P+ ++FN +I D CK + A L +M +
Sbjct: 246 KCGVWPNVVSFNMMI------------------DGACKTGDMRFALQLLGKMGMMSGNFV 287
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
SP+ VTY ++I+GFC G+L A + MV ++ + T+ LVDA + G EA
Sbjct: 288 SPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALR 347
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+ M G + V Y+S++ + ++ A + M + D + +I++ GLC
Sbjct: 348 LCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC 407
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
+ V +A+ +Q+ + + ++V +++L+ + +++ A +++ M +GL + I
Sbjct: 408 RNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAI 467
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
++ +L+D K ++ A+ + M N+ Y +++GL K G A+ V +
Sbjct: 468 SFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM 527
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME--DNGCTPNAVTYEIIIYALFQKG 424
IK D+ TY ++N K G +EA ++SKM+ D + + VT+ I+I L + G
Sbjct: 528 EIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFG 583
Query: 425 DNDKAEKLLRQMIARGLL 442
+KA+++L+ M+ RG++
Sbjct: 584 SYEKAKEVLKFMVERGVV 601
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 211/436 (48%), Gaps = 26/436 (5%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
FN S K A+S+ +M V P++ +FN++I+ C G + A +L +
Sbjct: 221 FNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMG 280
Query: 70 KRG---YQPDTITFNTII-------------KIQGKLAQPDV----VMYSTIIDSLCKDK 109
P+ +T+N++I +I+G + + V Y ++D+ +
Sbjct: 281 MMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAG 340
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
++A L EM +K + + V Y +++ + G ++ A+ +L M K++ D +T +
Sbjct: 341 SSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA 400
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
I+V LC+ G VKEA + + D+V +++LM + ++ A+ I +M
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
L+ D S+ +I+G K ++ AL ++ M N T N+V Y+S+++GL K G A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV--YTYTILL 347
+VN M + +++TY++LL+ K +V+ A ++ KM+ Q +V T+ I++
Sbjct: 521 EAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
+ LCK G + A+EV + ++ +G D TY +I K ++ + L + G T
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 408 PNAVTYEIIIYALFQK 423
P+ Y I+ L +
Sbjct: 637 PHEHIYLSIVRPLLDR 652
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 174/332 (52%), Gaps = 3/332 (0%)
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
+ +Y EM + +V T+ +I FC +L EA+ + +M+ + P+V +F++++D
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 175 LCKEGKVKEAKNVLAVM-IKGGE--KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
CK G ++ A +L M + G P+ VTY+S+++G+C ++ AE I M + +
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
+ ++Y +++ + D+AL L +M ++ + N V Y+S++ L G I A
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
++ +M+S+ + + T + ++ LC+N +V A+ +++ + ++ ++ + L+
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 352 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
+ +L A ++ +L++G +LD ++ +I+G K+G + AL + M T N V
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 412 TYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
Y I+ L ++G AE ++ M + ++T
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVT 534
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 185/388 (47%), Gaps = 26/388 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRR---VMPDLFTFNILINCYCHLGQITSA 61
P ++ FN KT A+ L +M V P+ T+N +IN +C G++ A
Sbjct: 251 PNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLA 310
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPD-----------------VVMYSTIIDS 104
+ ++ K G + T+ ++ G+ D V+Y++I+
Sbjct: 311 ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYW 370
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
L + + A ++ +M +K + D T ++ G C G +KEAV Q+ K + D
Sbjct: 371 LFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVED 430
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
+ + L+ ++ K+ A +L M+ G D +++ +L+DGY ++ +A +I++
Sbjct: 431 IVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYD 490
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M +M ++ Y+ ++NGL K M A + M ++I VTY++L++ K+G
Sbjct: 491 GMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTG 546
Query: 285 RISDAWELVNEMHSRGLPPNV--ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
+ +A +++++M + +V +T++ +++ LCK + A ++K M +G++P+ T
Sbjct: 547 NVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSIT 606
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKG 370
Y L+ K + E+ L+++G
Sbjct: 607 YGTLITSFSKHRSQEKVVELHDYLILQG 634
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 157/318 (49%), Gaps = 5/318 (1%)
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
SPDV + +L+ G + A ++ Q + V+ + + L ++
Sbjct: 147 SPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWK 204
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
V M G +V T++ ++ +C +++ +A +F M + + P+V S+++MI+G C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 247 KIKMVDDALNLFKQMHTEN---ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
K + AL L +M + ++PN VTY+S+I+G CK+GR+ A + +M G+
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
N TY +L+DA + D A+ L +M +G++ N Y ++ L G ++ A V
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+D+ K +D T I++ GLC++G EA+ ++ + + V + +++ +
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRD 444
Query: 424 GDNDKAEKLLRQMIARGL 441
A+++L M+ +GL
Sbjct: 445 KKLACADQILGSMLVQGL 462
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 141/295 (47%), Gaps = 5/295 (1%)
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 210
GL+ +PDV F LV A + G + A V+ G V ++ M
Sbjct: 136 GLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCL 193
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
VNE+++ ++ M + +V +++++I CK + +AL++F +M + PNV
Sbjct: 194 LNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNV 253
Query: 271 VTYSSLIDGLCKSGRISDAWELVNE---MHSRGLPPNVITYSSLLDALCKNHHVDNAISL 327
V+++ +IDG CK+G + A +L+ + M + PN +TY+S+++ CK +D A +
Sbjct: 254 VSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERI 313
Query: 328 IKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 387
M G+ N TY L+D + G +A + ++ KG ++ Y ++ L
Sbjct: 314 RGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFM 373
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+G + A++++ M + T I++ L + G +A + RQ+ + L+
Sbjct: 374 EGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLV 428
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 24/240 (10%)
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT---ENITPNVV--------- 271
NT+ + E ++ +MI+ L + DDAL++ + + E ++P V
Sbjct: 85 NTVAKSE--NRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQ 142
Query: 272 -------TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
+ SL+ ++G A+E++ + + G +V ++ + L + +D
Sbjct: 143 ACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
+ K+M G + NV T+ +++ CK +L +A VF +L G +V ++ +MI+G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 385 LCKDGLFDEALALMSK---MEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
CK G AL L+ K M N +PNAVTY +I + G D AE++ M+ G+
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 207/418 (49%), Gaps = 26/418 (6%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+ + + + FR + F+F+I ++ +C RG + D + ++K
Sbjct: 162 ALEIFEGIRFR----NFFSFDIALSHFC----------------SRGGRGDLVGVKIVLK 201
Query: 86 -IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
+ G+ P+ + I+ C+ V++A+ + M+ IS V ++ L+SGF G
Sbjct: 202 RMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSG 261
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
+ ++AV L N+M+ +P++ T++ L+ G V EA VL+ + G PD+V +
Sbjct: 262 EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HT 263
++ Y + +A +F ++ + +L PD +++ +++ LC + +L ++ H
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC----LSGKFDLVPRITHG 377
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
++VT + L + K G S A ++++ M + + TY+ L ALC+
Sbjct: 378 IGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRA 437
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
AI + K + + + + ++ ++D L + G+ A +F+ +++ Y LDV +YT+ I
Sbjct: 438 AIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIK 497
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
GL + +EA +L M++ G PN TY II L ++ + +K K+LR+ I G+
Sbjct: 498 GLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 186/400 (46%), Gaps = 37/400 (9%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVM---------PDLFTFNILINCYCHLGQI 58
I F FF+ + H+ + + + V+ P+ F ++ C G +
Sbjct: 169 IRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCV 228
Query: 59 TSAF------------------SVLCNIFKRGYQPDTIT--FNTIIKIQGKLAQPDVVMY 98
+ AF S+L + F R +P FN +I+I P++V Y
Sbjct: 229 SEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG---CSPNLVTY 285
Query: 99 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
+++I +V++A+ + S++ ++ ++PD+V +I + +G+ +EA + +
Sbjct: 286 TSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEK 345
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVN 217
+ + PD YTF+ ++ +LC GK +++ + G G D+VT + L + + + +
Sbjct: 346 RKLVPDQYTFASILSSLCLSGKF----DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNS 401
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A + + M+ + A D +Y++ ++ LC+ A+ ++K + E + +S++I
Sbjct: 402 YALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAII 461
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
D L + G+ + A L P +V++Y+ + L + ++ A SL MK GI
Sbjct: 462 DSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIY 521
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
PN TY ++ GLCK + +++ ++ + +G LD T
Sbjct: 522 PNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNT 561
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 35/309 (11%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ + V A ++ ++ + PD+ N++I+ Y LG+ A
Sbjct: 279 SPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARK 338
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
V ++ KR PD TF ++I+ SLC + L
Sbjct: 339 VFTSLEKRKLVPDQYTF------------------ASILSSLCLSGKFD---------LV 371
Query: 124 KRISPDVVTYTTLISG------FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCK 177
RI+ + T L++G F +G A+ +L+ M K D YT+++ + ALC+
Sbjct: 372 PRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQS 237
G + A + ++IK + D +S+++D + + N A +F + DV S
Sbjct: 432 GGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVS 491
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
Y++ I GL + K +++A +L M I PN TY ++I GLCK +++ E
Sbjct: 492 YTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECI 551
Query: 298 SRG--LPPN 304
G L PN
Sbjct: 552 QEGVELDPN 560
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 110/229 (48%), Gaps = 7/229 (3%)
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
+KA +++ M+ P+ ++ ++M++ K+ +V+ AL +F+ + N ++
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDIA 180
Query: 277 IDGLCKSGRISDAWEL---VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+ C G D + + M G PN + +L C+ V A ++ M
Sbjct: 181 LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
GI +V +++L+ G + G + A ++F ++ G + ++ TYT +I G G+ DE
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
A ++SK++ G P+ V ++I+ + G ++A K+ + R L+
Sbjct: 301 AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLV 349
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 156/321 (48%), Gaps = 20/321 (6%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
PD T+NILI+ G A + + K+ +P +TF T+I
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIH-------------- 195
Query: 100 TIIDSLCKDKLVNDAYNLYSEML-AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
LCKD V +A + +ML + P V Y +LI C +G+L A L ++
Sbjct: 196 ----GLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
I D +S L+ +L K G+ E +L M + G KPD VTY+ L++G+C+ N+
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
A + + M L PDV SY++++ +IK ++A LF+ M +P+ ++Y + D
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
GLC+ + +A +++EM +G P L LC++ ++ +I + H+GI
Sbjct: 372 GLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAG 430
Query: 339 NVYTYTILLDGLCKGGRLKDA 359
+ +++++ +CK + D+
Sbjct: 431 DADVWSVMIPTMCKEPVISDS 451
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 35/306 (11%)
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
PD TY LI G G +A+ L ++MV K + P TF L+ LCK+ +VKEA +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 188 LAVMIK-GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
M+K G +P V Y+SL+ C + E++ A + + ++ D YS +I+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K ++ + ++M + P+ VTY+ LI+G C A +++EM +GL P+VI
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
+Y+ +L + + A L + M +G P+ +Y I+ DGLC+G + ++A + ++
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 367 LIKGYNL----------------------------------DVRTYTIMINGLCKDGLFD 392
L KGY D +++MI +CK+ +
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVIS 449
Query: 393 EALALM 398
+++ L+
Sbjct: 450 DSIDLL 455
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 171/333 (51%), Gaps = 2/333 (0%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P +++ +I+ + KL + A +++ EM R V + +L+S G+L++
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L+ + + PD T++IL+ + G +A + M+K KP VT+ +L+ G C
Sbjct: 141 LSS-IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 213 VNEVNKAEDIFNTMTRM-ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+ V +A + + M ++ + P V Y+ +I LC+I + A L + + I +
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
YS+LI L K+GR ++ ++ EM +G P+ +TY+ L++ C + ++A ++ +M
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+G+ P+V +Y ++L + + ++A +F+D+ +G + D +Y I+ +GLC+ F
Sbjct: 320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQF 379
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+EA ++ +M G P E + L + G
Sbjct: 380 EEAAVILDEMLFKGYKPRRDRLEGFLQKLCESG 412
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 161/317 (50%), Gaps = 2/317 (0%)
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
RI P + + +I+ F A+ + ++M V + + L+ AL K G++++
Sbjct: 78 RIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKM 137
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
K L+ + + G KPD TY+ L+ G + A +F+ M + ++ P ++ +I+G
Sbjct: 138 KERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHG 196
Query: 245 LCKIKMVDDALNLFKQM-HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
LCK V +AL + M + P V Y+SLI LC+ G +S A++L +E + +
Sbjct: 197 LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV 256
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+ YS+L+ +L K + ++++M +G P+ TY +L++G C + A V
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+++ KG DV +Y +++ + ++EA L M GC+P+ ++Y I+ L +
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 424 GDNDKAEKLLRQMIARG 440
++A +L +M+ +G
Sbjct: 377 LQFEEAAVILDEMLFKG 393
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 327
P+ TY+ LI G +SG DA +L +EM + + P +T+ +L+ LCK+ V A+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEAL-- 207
Query: 328 IKKMKHQ-----GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 382
KMKH G+ P V+ Y L+ LC+ G L A ++ + +D Y+ +I
Sbjct: 208 --KMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLI 265
Query: 383 NGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ L K G +E ++ +M + GC P+ VTY ++I + D++ A ++L +M+ +GL
Sbjct: 266 SSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 112/254 (44%), Gaps = 19/254 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + + +L + + A L + ++ D ++ LI+ G+ +
Sbjct: 221 PTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMI 280
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L + ++G +PDT+T+N +I+ C + A + EM+ K
Sbjct: 281 LEEMSEKGCKPDTVTYN------------------VLINGFCVENDSESANRVLDEMVEK 322
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ PDV++Y ++ F + + +EA L M + +PD ++ I+ D LC+ + +EA
Sbjct: 323 GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+L M+ G KP + C ++ + +++ R +A D +S+MI
Sbjct: 383 AVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMIPT 441
Query: 245 LCKIKMVDDALNLF 258
+CK ++ D+++L
Sbjct: 442 MCKEPVISDSIDLL 455
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 161/314 (51%), Gaps = 6/314 (1%)
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V +Y L+ F G+ K L+++MV TF++L+ C G+ AK +
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVV 205
Query: 190 VMIKG---GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+K +P +Y+++++ V + E ++ M +PDV +Y+I++
Sbjct: 206 QFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
++ +D LF +M + +P+ TY+ L+ L K + A +N M G+ P+V+
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
Y++L+D L + +++ + +M G P+V YT+++ G G L A+E+F+++
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
+KG +V TY MI GLC G F EA L+ +ME GC PN V Y ++ L + G
Sbjct: 386 TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 427 DKAEKLLRQMIARG 440
+A K++R+M+ +G
Sbjct: 446 SEARKVIREMVKKG 459
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 157/321 (48%), Gaps = 21/321 (6%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGK--LAQPDVVM---- 97
++++L+ + G+ + + ++ + + G+ TFN +I G+ LA+ VV
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 98 -----------YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
Y+ I++SL K +Y +ML SPDV+TY L+ +G++
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
L ++M +PD YT++IL+ L K K A L M + G P V+ Y++L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
+DG + + + M + PDV Y++MI G +D A +F++M +
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 326
PNV TY+S+I GLC +G +A L+ EM SRG PN + YS+L+ L K + A
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 327 LIKKMKHQG----ILPNVYTY 343
+I++M +G ++P + Y
Sbjct: 451 VIREMVKKGHYVHLVPKMMKY 471
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 144/286 (50%), Gaps = 31/286 (10%)
Query: 30 SQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGK 89
S+ ++R P ++N ++N + Q V + + G+ PD +T+N ++ +
Sbjct: 210 SKTFNYR---PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYR 266
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKE- 148
L + D + + D + +D SPD TY L+ I+G+ +
Sbjct: 267 LGKMD--RFDRLFDEMARDGF----------------SPDSYTYNILLH---ILGKGNKP 305
Query: 149 --AVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
A+ LN M I+P V ++ L+D L + G ++ K L M+K G +PDVV Y+ +
Sbjct: 306 LAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
+ GY + E++KA+++F MT P+V +Y+ MI GLC +A L K+M +
Sbjct: 366 ITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGC 425
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG----LPPNVITY 308
PN V YS+L+ L K+G++S+A +++ EM +G L P ++ Y
Sbjct: 426 NPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 148/291 (50%)
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
+ L EM+ T+ LI G K+AV + + P ++++ ++++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 175 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 234
L + K + V M++ G PDV+TY+ L+ + ++++ + +F+ M R +PD
Sbjct: 229 LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPD 288
Query: 235 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
+Y+I+++ L K AL M I P+V+ Y++LIDGL ++G + ++
Sbjct: 289 SYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLD 348
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
EM G P+V+ Y+ ++ + +D A + ++M +G LPNV+TY ++ GLC G
Sbjct: 349 EMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 408
Query: 355 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
++A + +++ +G N + Y+ +++ L K G EA ++ +M G
Sbjct: 409 EFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 21/255 (8%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +N SL+ K Y + +QM PD+ T+NIL+ LG++ +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGK----LA-------------QPDVVMYSTIIDSLCK 107
+ + G+ PD+ T+N ++ I GK LA P V+ Y+T+ID L +
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ EM+ PDVV YT +I+G+ + G+L +A + +M +K P+V+T
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ ++ LC G+ +EA +L M G P+ V YS+L+ ++++A + M
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Query: 228 R----MELAPDVQSY 238
+ + L P + Y
Sbjct: 457 KKGHYVHLVPKMMKY 471
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 136/312 (43%), Gaps = 11/312 (3%)
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSI------LVDALCKEGKVKEAKNVLAVMIKGGE-- 196
QL E+ G ++ VL +N V + ++ L + K + AK + GE
Sbjct: 85 QLDES-GFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQE 143
Query: 197 --KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
+ V +Y LM + E + + M + ++++++I + + A
Sbjct: 144 CFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQA 203
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+ F + T N P +Y+++++ L + + +M G P+V+TY+ LL
Sbjct: 204 VVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT 263
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
+ +D L +M G P+ YTY ILL L KG + A + G +
Sbjct: 264 NYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPS 323
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
V YT +I+GL + G + + +M GC P+ V Y ++I G+ DKA+++ R
Sbjct: 324 VLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFR 383
Query: 435 QMIARGLLTGLF 446
+M +G L +F
Sbjct: 384 EMTVKGQLPNVF 395
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 184/389 (47%), Gaps = 20/389 (5%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
++ L K++++ + + + +R V F LI Y G + A V I
Sbjct: 84 YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI- 142
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+F+ + IQ +T+I+ L + + A + + R+ P+
Sbjct: 143 --------TSFDCVRTIQS---------LNTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V++ LI GF + A + ++M+ + P V T++ L+ LC+ + +AK++L
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
MIK +P+ VT+ LM G C E N+A+ + M P + +Y I+++ L K
Sbjct: 246 DMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRG 305
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+D+A L +M I P+VV Y+ L++ LC R+ +A+ ++ EM +G PN TY
Sbjct: 306 RIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYR 365
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
++D C+ D+ ++++ M P T+ ++ GL KGG L A V + + K
Sbjct: 366 MMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKK 425
Query: 370 GYNLDVRTYTIMINGLC-KD-GLFDEALA 396
+ + +++ LC KD G++ EAL+
Sbjct: 426 NLSFGSGAWQNLLSDLCIKDGGVYCEALS 454
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 174/351 (49%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D YS++I L K + + + + + + + LI + G + +A+ +
Sbjct: 80 DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVF 139
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+++ + + + L++ L G++++AK+ +P+ V+++ L+ G+
Sbjct: 140 HKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDK 199
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+ A +F+ M ME+ P V +Y+ +I LC+ + A +L + M + I PN VT+
Sbjct: 200 CDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTF 259
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
L+ GLC G ++A +L+ +M RG P ++ Y L+ L K +D A L+ +MK
Sbjct: 260 GLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK 319
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
+ I P+V Y IL++ LC R+ +A V ++ +KG + TY +MI+G C+ FD
Sbjct: 320 RRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDS 379
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
L +++ M + P T+ ++ L + G+ D A +L M + L G
Sbjct: 380 GLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFG 430
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 136/310 (43%), Gaps = 18/310 (5%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I N LV A S R+ P+ +FNILI + +A V
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
+ + QP +T+N++I LC++ + A +L +M+ KRI
Sbjct: 211 EMLEMEVQPSVVTYNSLIGF------------------LCRNDDMGKAKSLLEDMIKKRI 252
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
P+ VT+ L+ G C G+ EA L+ M + P + + IL+ L K G++ EAK
Sbjct: 253 RPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKL 312
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+L M K KPDVV Y+ L++ C V +A + M P+ +Y +MI+G C
Sbjct: 313 LLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
+I+ D LN+ M P T+ ++ GL K G + A ++ M + L
Sbjct: 373 RIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSG 432
Query: 307 TYSSLLDALC 316
+ +LL LC
Sbjct: 433 AWQNLLSDLC 442
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
MR P + FN + + A + +M V P + T+N LI C +
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
A S+L ++ K+ +P+ +TF ++K LC N+A L +
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMK------------------GLCCKGEYNEAKKLMFD 281
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M + P +V Y L+S G++ EA LL +M + I PDV ++ILV+ LC E +
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
V EA VL M G KP+ TY ++DG+C + + + ++ N M P ++
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
M+ GL K +D A + + M +N++ + +L+ LC
Sbjct: 402 MVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%)
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ + +A +F+ M D SYS +I L K + D + + + N+
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
+ LI K+G + A ++ +++ S + + ++L++ L N ++ A S K
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ PN ++ IL+ G + A +VF ++L V TY +I LC++
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
+A +L+ M PNAVT+ +++ L KG+ ++A+KL+ M RG GL
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ + + L K A L +M RR+ PD+ +NIL+N C ++ A+ V
Sbjct: 289 PGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRV 348
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L ++Q K +P+ Y +ID C+ + + N+ + MLA
Sbjct: 349 L------------------TEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLAS 390
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALC-KEGKV 181
R P T+ +++G G L A +L M K+++ + L+ LC K+G V
Sbjct: 391 RHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGV 448
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 182/375 (48%), Gaps = 57/375 (15%)
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
+G++ + ++ + I GK + D + ++ + DKLV +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRM--KEFVERMRGDKLVT-----------------L 155
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
T ++ F G+ +EAVG+ +++ + + + ++L+D LCKE +V++A+ VL
Sbjct: 156 NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ 215
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
+ + + P+ +++I I+G CK
Sbjct: 216 L------------------------------------KSHITPNAHTFNIFIHGWCKANR 239
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
V++AL ++M P V++Y+++I C+ +E+++EM + G PPN ITY++
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ-DLLIK 369
++ +L + A+ + +MK G P+ Y L+ L + GRL++A+ VF+ ++
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKME-DNGCTPNAVTYEIIIYALFQKGDNDK 428
G +++ TY MI C D+A+ L+ +ME N C P+ TY+ ++ + F++GD +
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
Query: 429 AEKLLRQMIARGLLT 443
KLL++M+ + L+
Sbjct: 420 VGKLLKEMVTKHHLS 434
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 21/298 (7%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
+ P+ TFNI I+ +C ++ A TI +++G +P V+
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALW------------------TIQEMKGHGFRPCVIS 261
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y+TII C+ Y + SEM A P+ +TYTT++S + +EA+ + +M
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAV-MIKGGEKPDVVTYSSLMDGYCLVNEV 216
PD ++ L+ L + G+++EA+ V V M + G + TY+S++ YC +E
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 217 NKAEDIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYS 274
+KA ++ M L PDV +Y ++ K V + L K+M T+ +++ + TY+
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
LI LC++ A+ L EM S+ + P T LL+ + K + ++A + MK
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 53/288 (18%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P FN F K A+ Q+M P + ++ +I CYC + +
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYE 280
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
+L + G P++IT+ TI+ +++ +PD + Y+ +I +L
Sbjct: 281 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 340
Query: 107 KDKLVNDAYNLYS-EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI-NPD 164
+ + +A ++ EM +S + TY ++I+ +C + +A+ LL +M ++ NPD
Sbjct: 341 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 400
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V+T+ L+ + K G V E +L M+
Sbjct: 401 VHTYQPLLRSCFKRGDVVEVGKLLKEMV-------------------------------- 428
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
T+ L+ D +Y+ +I LC+ M + A LF++M +++ITP T
Sbjct: 429 --TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+Y + ++ L K K D ++M + + + T + ++ +G +A + + +
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
GL N + + LLD LCK V+ A ++ ++K I PN +T+ I + G CK R+
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRV 240
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
++A Q++ G+ V +YT +I C+ F + ++S+ME NG PN++TY I
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 417 IYALFQKGDNDKAEKLLRQMIARGLL-TGLFY 447
+ +L + + ++A ++ +M G LFY
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 182/375 (48%), Gaps = 57/375 (15%)
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
+G++ + ++ + I GK + D + ++ + DKLV +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRM--KEFVERMRGDKLVT-----------------L 155
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
T ++ F G+ +EAVG+ +++ + + + ++L+D LCKE +V++A+ VL
Sbjct: 156 NTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ 215
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
+ + + P+ +++I I+G CK
Sbjct: 216 L------------------------------------KSHITPNAHTFNIFIHGWCKANR 239
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
V++AL ++M P V++Y+++I C+ +E+++EM + G PPN ITY++
Sbjct: 240 VEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTT 299
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ-DLLIK 369
++ +L + A+ + +MK G P+ Y L+ L + GRL++A+ VF+ ++
Sbjct: 300 IMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKME-DNGCTPNAVTYEIIIYALFQKGDNDK 428
G +++ TY MI C D+A+ L+ +ME N C P+ TY+ ++ + F++GD +
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
Query: 429 AEKLLRQMIARGLLT 443
KLL++M+ + L+
Sbjct: 420 VGKLLKEMVTKHHLS 434
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 21/298 (7%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
+ P+ TFNI I+ +C ++ A TI +++G +P V+
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALW------------------TIQEMKGHGFRPCVIS 261
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
Y+TII C+ Y + SEM A P+ +TYTT++S + +EA+ + +M
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAV-MIKGGEKPDVVTYSSLMDGYCLVNEV 216
PD ++ L+ L + G+++EA+ V V M + G + TY+S++ YC +E
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 217 NKAEDIFNTMTRMELA-PDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYS 274
+KA ++ M L PDV +Y ++ K V + L K+M T+ +++ + TY+
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
LI LC++ A+ L EM S+ + P T LL+ + K + ++A + MK
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMK 499
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 53/288 (18%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P FN F K A+ Q+M P + ++ +I CYC + +
Sbjct: 221 TPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYE 280
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
+L + G P++IT+ TI+ +++ +PD + Y+ +I +L
Sbjct: 281 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 340
Query: 107 KDKLVNDAYNLYS-EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI-NPD 164
+ + +A ++ EM +S + TY ++I+ +C + +A+ LL +M ++ NPD
Sbjct: 341 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 400
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V+T+ L+ + K G V E +L M+
Sbjct: 401 VHTYQPLLRSCFKRGDVVEVGKLLKEMV-------------------------------- 428
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
T+ L+ D +Y+ +I LC+ M + A LF++M +++ITP T
Sbjct: 429 --TKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+Y + ++ L K K D ++M + + + T + ++ +G +A + + +
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKLV-TLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
GL N + + LLD LCK V+ A ++ ++K I PN +T+ I + G CK R+
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRV 240
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
++A Q++ G+ V +YT +I C+ F + ++S+ME NG PN++TY I
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 417 IYALFQKGDNDKAEKLLRQMIARGLL-TGLFY 447
+ +L + + ++A ++ +M G LFY
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 177/365 (48%), Gaps = 22/365 (6%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA------------- 91
+N ++ Y G+ + A ++ + +RG PD I+FNT+I + K
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 92 ------QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
+PD + Y+T++ + +D ++ A ++ +M A R PD+ TY +IS + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
EA L ++ LK PD T++ L+ A +E ++ K V M K G D +TY++
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
++ Y +++ A ++ M + PD +Y+++I+ L K +A L +M
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
I P + TYS+LI G K+G+ +A + + M G P+ + YS +LD L + + A
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMIN 383
L + M G P+ Y +++ GL K R D Q+ +D+ + G N + ++++
Sbjct: 528 WGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMN-PLEISSVLVK 586
Query: 384 GLCKD 388
G C D
Sbjct: 587 GECFD 591
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 155/314 (49%), Gaps = 3/314 (0%)
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE--AKNV 187
V Y ++ + G+ +A L++ M + PD+ +F+ L++A K G + A +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
L ++ G +PD +TY++L+ + ++ A +F M PD+ +Y+ MI+ +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 248 IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
+ +A LF ++ + P+ VTY+SL+ + E+ +M G + +T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 308 YSSLLDALCKNHHVDNAISLIKKMKH-QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
Y++++ K +D A+ L K MK G P+ TYT+L+D L K R +A + ++
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
L G ++TY+ +I G K G +EA S M +G P+ + Y +++ L + +
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524
Query: 427 DKAEKLLRQMIARG 440
KA L R MI+ G
Sbjct: 525 RKAWGLYRDMISDG 538
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 164/364 (45%), Gaps = 25/364 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +N ++ + + A+ + + M+ R PDL+T+N +I+ Y G A +
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ +G+ PD +T+N+++ + +++ +Y +M
Sbjct: 355 FMELELKGFFPDAVTYNSLLY------------------AFARERNTEKVKEVYQQMQKM 396
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV-LKSINPDVYTFSILVDALCKEGKVKE 183
D +TY T+I + GQL A+ L M L NPD T+++L+D+L K + E
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A +++ M+ G KP + TYS+L+ GY + +AED F+ M R PD +YS+M++
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GLP 302
L + A L++ M ++ TP+ Y +I GL K R D + + +M G+
Sbjct: 517 VLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMN 576
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P I+ L K D A +K G T +L GR +A E+
Sbjct: 577 PLEIS-----SVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFEL 631
Query: 363 FQDL 366
+ L
Sbjct: 632 LEFL 635
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 145/284 (51%), Gaps = 3/284 (1%)
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV--N 217
++ V ++ ++ + GK +A+ ++ M + G PD++++++L++ + N
Sbjct: 220 TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN 279
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A ++ + + L PD +Y+ +++ + +D A+ +F+ M P++ TY+++I
Sbjct: 280 LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMI 339
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
+ G ++A L E+ +G P+ +TY+SLL A + + + + ++M+ G
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALA 396
+ TY ++ K G+L A ++++D+ + G N D TYT++I+ L K EA A
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
LMS+M D G P TY +I + G ++AE M+ G
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 180/454 (39%), Gaps = 87/454 (19%)
Query: 18 VKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDT 77
V +HYA A + + ++ YC LG +A V+ +G+
Sbjct: 692 VANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFH--- 748
Query: 78 ITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLI 137
P MY+ II++ K KL A ++ + +PD+ T+ +L+
Sbjct: 749 -----------FACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLM 794
Query: 138 SGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK 197
S + G + A + N M+ +P V + +IL+ ALC +G+++E V+ + G K
Sbjct: 795 SAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFK 854
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
+ ++D + + + + I+++M P ++ Y +MI LCK K V DA +
Sbjct: 855 ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIM 914
Query: 258 FKQMHTEN-----------------------------------ITPNVVTYSSLIDGLCK 282
+M N + P+ TY++LI C+
Sbjct: 915 VSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCR 974
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
R + + L+ +M + GL P + TY SL+ A K
Sbjct: 975 DRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQK----------------------- 1011
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
C L+ A+++F++LL KG LD Y M+ G +A L+ M+
Sbjct: 1012 --------C----LEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+ G P T +++ + G+ +AEK+L +
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 171/401 (42%), Gaps = 18/401 (4%)
Query: 19 KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTI 78
K K + A S+ + PDL T+N L++ Y G A ++ + + G P
Sbjct: 764 KQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVE 823
Query: 79 TFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
+ N ++ +LC D + + Y + E+ + ++
Sbjct: 824 SINILLH------------------ALCVDGRLEELYVVVEELQDMGFKISKSSILLMLD 865
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
F G + E + + M P + + ++++ LCK +V++A+ +++ M + K
Sbjct: 866 AFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKV 925
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
++ ++S++ Y + + K ++ + L PD +Y+ +I C+ + ++ L
Sbjct: 926 ELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLM 985
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
+QM + P + TY SLI K + A +L E+ S+GL + Y +++ +
Sbjct: 986 QQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDS 1045
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
A L++ MK+ GI P + T +L+ G ++A++V +L L Y
Sbjct: 1046 GSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPY 1105
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
+ +I+ + ++ + + +M+ G P+ + + A
Sbjct: 1106 SSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 123/241 (51%), Gaps = 10/241 (4%)
Query: 210 YCLV------NEVNKAEDIFNTMT-RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
YC V +A ++F + R +P+ + + ++ L + A+ +F +
Sbjct: 159 YCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAE 218
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV- 321
+ V Y++++ +SG+ S A ELV+ M RG P++I++++L++A K+ +
Sbjct: 219 P-TVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLT 277
Query: 322 -DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
+ A+ L+ +++ G+ P+ TY LL + L A +VF+D+ D+ TY
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
MI+ + GL EA L ++E G P+AVTY ++YA ++ + +K +++ +QM G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 441 L 441
Sbjct: 398 F 398
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 120/245 (48%), Gaps = 3/245 (1%)
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD--ALNL 257
V Y+++M Y + +KA+++ + M + PD+ S++ +IN K + A+ L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
+ + P+ +TY++L+ + + A ++ +M + P++ TY++++ +
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
A L +++ +G P+ TY LL + + +EV+Q + G+ D T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 378 YTIMINGLCKDGLFDEALALMSKMED-NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
Y +I+ K G D AL L M+ +G P+A+TY ++I +L + +A L+ +M
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 437 IARGL 441
+ G+
Sbjct: 465 LDVGI 469
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 177/425 (41%), Gaps = 29/425 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + +N ++ + Y A ++ M P + + NIL++ C G++ +
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQ--------------------PDVVMYSTIID 103
V+ + G++ I+ ++I+ + A+ P + +Y +I+
Sbjct: 844 VVEELQDMGFK---ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
LCK K V DA + SEM ++ + +++ + + K+ V + ++ + P
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP 960
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D T++ L+ C++ + +E ++ M G P + TY SL+ + + +AE +F
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF 1020
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
+ L D Y M+ A L + M I P + T L+ S
Sbjct: 1021 EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSS 1080
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
G +A ++++ + + + YSS++DA ++ ++ I + +MK +G+ P+ +
Sbjct: 1081 GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW 1140
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK--DGLFDEALALMSKM 401
T + + + + L G++L +R L DG F++ + +
Sbjct: 1141 TCFVRAASFSKEKIEVMLLLKALEDIGFDLPIRLLAGRPELLVSEVDGWFEK----LKSI 1196
Query: 402 EDNGC 406
EDN
Sbjct: 1197 EDNAA 1201
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 208/468 (44%), Gaps = 44/468 (9%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P+ + F K A A +L M+ D + L+ YC +T A
Sbjct: 232 RMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMA 291
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLA-----------------QPDVVMYSTIIDS 104
+ + +R ++ D FNT+I KL Q +V Y +I S
Sbjct: 292 MRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGS 351
Query: 105 LCKDKLVNDAYNLY-SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
CK+ V+ A L+ + ++ IS +V YT LI GF G + +AV LL +M+ I P
Sbjct: 352 YCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN--------- 214
D T+ +L+ L K ++K A +V S++D C +N
Sbjct: 412 DHITYFVLLKMLPKCHELKYA---------------MVILQSILDNGCGINPPVIDDLGN 456
Query: 215 -EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
EV K E + + R + +++ LC + AL+ ++M TP +Y
Sbjct: 457 IEV-KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSY 515
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+S+I L + I D LVN + P+V TY +++ LCK + D A ++I M+
Sbjct: 516 NSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEE 575
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
G+ P V Y+ ++ L K GR+ +A+E F +L G D Y IMIN ++G DE
Sbjct: 576 LGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDE 635
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
A L+ ++ + P++ TY ++I + G +K + L +M+ GL
Sbjct: 636 ANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 209/437 (47%), Gaps = 27/437 (6%)
Query: 24 ATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTI 83
A+ +++ Q++DF +PD+ T+ I++N C +AF+++ + + G +P +++I
Sbjct: 532 ASLVNIIQELDF---VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSI 588
Query: 84 IKIQGKLA-----------------QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
I GK QPD + Y +I++ ++ +++A L E++ +
Sbjct: 589 IGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL 648
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
P TYT LISGF +G +++ L++M+ ++P+V ++ L+ K+G K +
Sbjct: 649 RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFT 708
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN--- 243
+ +M + K D + Y +L+ G K + + +L + +++
Sbjct: 709 LFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPS 768
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
L A+ + ++ ++I PN+ ++++I G C +GR+ +A+ + M G+ P
Sbjct: 769 SLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVP 827
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
N++TY+ L+ + + +++AI L + + P+ Y+ LL GLC R DA +
Sbjct: 828 NLVTYTILMKSHIEAGDIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALM 884
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
++ G N + +Y ++ LC L EA+ ++ M P ++ + +IY L ++
Sbjct: 885 LEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEE 944
Query: 424 GDNDKAEKLLRQMIARG 440
+A L M+ G
Sbjct: 945 KKLREARALFAIMVQSG 961
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 199/478 (41%), Gaps = 62/478 (12%)
Query: 19 KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTI 78
K + A+ L +M R D FN LI+ + LG + + + K+G Q +
Sbjct: 284 KDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVF 343
Query: 79 TFNTIIKIQGKLAQPDVVM------------------YSTIIDSLCKDKLVNDAYNLYSE 120
T++ +I K D + Y+ +I K ++ A +L
Sbjct: 344 TYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMR 403
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAV-----------------------------G 151
ML I PD +TY L+ +LK A+
Sbjct: 404 MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVES 463
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
LL ++ K N +++ ALC + A + + M+ G P +Y+S++ C
Sbjct: 464 LLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK--C 521
Query: 212 LVNEVNKAEDI---FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
L E N ED+ N + ++ PDV +Y I++N LCK D A + M + P
Sbjct: 522 LFQE-NIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
V YSS+I L K GR+ +A E +M G+ P+ I Y +++ +N +D A L+
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
+++ + P+ +TYT+L+ G K G ++ + +L G + +V YT +I K
Sbjct: 641 EEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKK 700
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK---------AEKLLRQMI 437
G F + L M +N + + Y ++ L++ K EKLL+++I
Sbjct: 701 GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLI 758
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 170/417 (40%), Gaps = 49/417 (11%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
++PD + ++ C L + A + L I GY P +
Sbjct: 127 IVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNS------------------ 168
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
S ++D LC +A++ + ++ + + L G C G L EA+G+L+ +
Sbjct: 169 SSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLC 228
Query: 158 LKSINP-DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+ P V + L CK G EA+ + M G D V Y+ LM YC N +
Sbjct: 229 GMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNM 288
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
A ++ M D ++ +I+G K+ M+D +F QM + + NV TY +
Sbjct: 289 TMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIM 348
Query: 277 IDGLCKSGRISDAWEL-VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
I CK G + A L VN S + NV Y++L+ K +D A+ L+ +M G
Sbjct: 349 IGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNG 408
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG------------------------- 370
I+P+ TY +LL L K LK A + Q +L G
Sbjct: 409 IVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEI 468
Query: 371 ----YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
NL ++ LC + AL+ + KM + GCTP +Y +I LFQ+
Sbjct: 469 ARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 525
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 182/403 (45%), Gaps = 46/403 (11%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
+RP+ I ++ SL K A +M + PD + I+IN Y G+I
Sbjct: 578 LRPTVAI--YSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDE 635
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLA-----------------QPDVVMYSTIID 103
A ++ + K +P + T+ +I K+ P+VV+Y+ +I
Sbjct: 636 ANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIG 695
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF-----------CIVGQLKEAV-- 150
K ++ L+ M I D + Y TL+SG IV KE +
Sbjct: 696 HFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQ 755
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 210
L+ L SI + + A+ GKVK K+++ P++ +++++ GY
Sbjct: 756 RLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVK--KSII---------PNLYLHNTIITGY 804
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
C +++A + +M + + P++ +Y+I++ + ++ A++LF+ + E P+
Sbjct: 805 CAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCE---PDQ 861
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
V YS+L+ GLC R DA L+ EM G+ PN +Y LL LC + A+ ++K
Sbjct: 862 VMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKD 921
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
M I P +T L+ LC+ +L++A+ +F ++ G +L
Sbjct: 922 MAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSL 964
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 157/356 (44%), Gaps = 29/356 (8%)
Query: 72 GYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE-MLAKRISPDV 130
G + D+ + +I+ ++ QP V A Y++ ++ I PD
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGV------------------AETFYNQRVIGNGIVPDS 131
Query: 131 VTYTTLISGFCIVG--QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
+++ FC+V + EA L++++ P + S++VD LC + + EA +
Sbjct: 132 SVLDSMV--FCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCF 189
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT---MTRMELAPDVQSYSIMINGL 245
+ + G + L G C +N+A + +T MTRM L V Y +
Sbjct: 190 EQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLP--VNLYKSLFYCF 247
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
CK +A LF M + + V Y+ L+ CK ++ A L M R +
Sbjct: 248 CKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF-Q 364
+++L+ K +D + +M +G+ NV+TY I++ CK G + A +F
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVN 367
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
+ + + +V YT +I G K G D+A+ L+ +M DNG P+ +TY +++ L
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 2/268 (0%)
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT-MTRMELAPDVQSYS 239
+ EA V + G + D Y +L+ + + AE +N + + PD
Sbjct: 76 ISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLD 135
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
M+ L K++ D+A ++ P+ + S ++D LC R +A+ ++ R
Sbjct: 136 SMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKER 195
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP-NVYTYTILLDGLCKGGRLKD 358
G + L LC + H++ AI ++ + +P V Y L CK G +
Sbjct: 196 GSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAE 255
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
A+ +F + + GY +D YT ++ CKD A+ L +M + + + +I+
Sbjct: 256 AEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIH 315
Query: 419 ALFQKGDNDKAEKLLRQMIARGLLTGLF 446
+ G DK + QMI +G+ + +F
Sbjct: 316 GFMKLGMLDKGRVMFSQMIKKGVQSNVF 343
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
K I P++ + T+I+G+C G+L EA L M + I P++ T++IL+ + + G ++
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIES 847
Query: 184 AKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
A + + +G +PD V YS+L+ G C A + M + + P+ SY ++
Sbjct: 848 AID----LFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
LC ++ +A+ + K M +I P + ++ LI LC+ ++ +A L M G
Sbjct: 904 QCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRS 963
Query: 303 PNVITYSSLLDALCKNHHV 321
T LL L +N +
Sbjct: 964 LLNCTKPGLLKMLNQNQQL 982
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 177/370 (47%), Gaps = 30/370 (8%)
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSL--------------------CKDK 109
++GY ++++I I GK+ + D T+ID + C
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAW--TLIDEMRKFSPSLVNSQTLLIMIRKYCAVH 211
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP-DVYTF 168
V A N + ++ + + +L+S C + +A L+ K P D +F
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSF 269
Query: 169 SILVDALCKE-GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+I+++ C G +EA+ V M G K DVV+YSS++ Y +NK +F+ M
Sbjct: 270 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK 329
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN-ITPNVVTYSSLIDGLCKSGRI 286
+ + PD + Y+ +++ L K V +A NL K M E I PNVVTY+SLI LCK+ +
Sbjct: 330 KECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKT 389
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A ++ +EM +GL P + TY + + L V L+ KM+ G P V TY +L
Sbjct: 390 EEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIML 446
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+ LC+ + ++ ++ K D+ +Y +MI+GL +G +EA +M+D G
Sbjct: 447 IRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Query: 407 TPNAVTYEII 416
PN ++I
Sbjct: 507 RPNENVEDMI 516
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 180/357 (50%), Gaps = 21/357 (5%)
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTL---ISGFCIVGQLKEAVG 151
V Y ++I L K + + A+ L EM ++ SP +V TL I +C V + +A+
Sbjct: 161 VREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGY 210
+ + + F L+ ALC+ V +A ++ + + P D +++ +++G+
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHL--IFCNKDKYPFDAKSFNIVLNGW 276
Query: 211 C-LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
C ++ +AE ++ M + + DV SYS MI+ K ++ L LF +M E I P+
Sbjct: 277 CNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD 336
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLI 328
Y++++ L K+ +S+A L+ M +G+ PNV+TY+SL+ LCK + A +
Sbjct: 337 RKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK----GYNLDVRTYTIMING 384
+M +G+ P + TY + L G +EVF+ LL K G V TY ++I
Sbjct: 397 DEMLEKGLFPTIRTYHAFMRILRTG------EEVFE-LLAKMRKMGCEPTVETYIMLIRK 449
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
LC+ FD L L +M++ P+ +Y ++I+ LF G ++A ++M +G+
Sbjct: 450 LCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 29/269 (10%)
Query: 41 DLFTFNILINCYCH-LGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
D +FNI++N +C+ +G A V + G + DVV YS
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVG------------------VKHDVVSYS 306
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL- 158
++I K +N L+ M + I PD Y ++ + EA L+ M
Sbjct: 307 SMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEE 366
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
K I P+V T++ L+ LCK K +EAK V M++ G P + TY + M +
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM------RILRT 420
Query: 219 AEDIFN---TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
E++F M +M P V++Y ++I LC+ + D+ L L+ +M + + P++ +Y
Sbjct: 421 GEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIV 480
Query: 276 LIDGLCKSGRISDAWELVNEMHSRGLPPN 304
+I GL +G+I +A+ EM +G+ PN
Sbjct: 481 MIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 22/233 (9%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
V D+ +++ +I+CY G + +F R ++ + +PD +
Sbjct: 298 VKHDVVSYSSMISCYSKGGSLNKVL----KLFDR--------------MKKECIEPDRKV 339
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
Y+ ++ +L K V++A NL M ++ I P+VVTY +LI C + +EA + ++M
Sbjct: 340 YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM 399
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+ K + P + T+ + L + G +E +LA M K G +P V TY L+ C +
Sbjct: 400 LEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+ +++ M + PD+ SY +MI+GL +++A +K+M + + PN
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 137/266 (51%), Gaps = 1/266 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
QP+ V Y+ +I S + +N+A N++++M PD VTY TLI G L A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+ +M ++PD +T+S++++ L K G + A + M+ G P++VTY+ +MD +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
A ++ M PD +YSI++ L +++A +F +M +N P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
Y L+D K+G + AW+ M GL PNV T +SLL + + + A L++ M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLK 357
G+ P++ TYT+LL C GR K
Sbjct: 636 LALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 150/282 (53%)
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D +T++ +V L + + +L M++ G +P+ VTY+ L+ Y N +N+A ++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
N M PD +Y +I+ K +D A++++++M ++P+ TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
G + A +L EM +G PN++TY+ ++D K + NA+ L + M++ G P+ TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
+I+++ L G L++A+ VF ++ K + D Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
G PN T ++ + +A +LL+ M+A GL L
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 160/364 (43%), Gaps = 27/364 (7%)
Query: 52 YCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA-------------------- 91
YC+ G I S + F+ G + N ++I A
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWL 354
Query: 92 --QP----DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
QP D Y+T++ +L + K L EM+ P+ VTY LI +
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
L EA+ + NQM PD T+ L+D K G + A ++ M GG PD TYS
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
+++ + A +F M P++ +Y+IM++ K + +AL L++ M
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
P+ VTYS +++ L G + +A + EM + P+ Y L+D K +V+ A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
+ M H G+ PNV T LL + ++ +A E+ Q++L G ++TYT++++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-C 653
Query: 386 CKDG 389
C DG
Sbjct: 654 CTDG 657
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 22/299 (7%)
Query: 16 SLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP 75
+L + K + L +M P+ T+N LI+ Y + A +V + + G +P
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
D +T+ T+I I K D+ M ++Y M A +SPD TY+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAM------------------DMYQRMQAGGLSPDTFTYSV 474
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
+I+ G L A L +MV + P++ T++I++D K + A + M G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 196 EKPDVVTYSSLMD--GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
+PD VTYS +M+ G+C + +AE +F M + PD Y ++++ K V+
Sbjct: 535 FEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
A ++ M + PNV T +SL+ + +I++A+EL+ M + GL P++ TY+ LL
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 128/247 (51%)
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G K D TY++++ + + + M R P+ +Y+ +I+ + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+N+F QM P+ VTY +LID K+G + A ++ M + GL P+ TYS +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
L K H+ A L +M QG PN+ TY I++D K ++A ++++D+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
TY+I++ L G +EA A+ ++M+ P+ Y +++ + G+ +KA + +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 435 QMIARGL 441
M+ GL
Sbjct: 599 AMLHAGL 605
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 55/346 (15%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N+ S + + A+++ QM PD T+ LI+ + G + A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
+ G PDT T++ II GK P++V Y+ ++D K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +A LY +M PD VTY+ ++ G L+EA + +M K+ PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ +LVD K G V++A M+ G +P+V T +SL+ + VN++ +A ++ M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 228 RMELAPDVQSYSIMIN-----------GLCKIKMV------------------------D 252
+ L P +Q+Y+++++ G C M +
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRN 696
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA---WELVNE 295
A N MH+E+ +++D L KSG+ +A WE+ +
Sbjct: 697 HANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQ 742
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 18/196 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ L K H A L +M + P+L T+NI+++ + +A
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLC 106
+ ++ G++PD +T++ ++++ G PD +Y ++D
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K V A+ Y ML + P+V T +L+S F V ++ EA LL M+ + P +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 167 TFSILVDALCKEGKVK 182
T+++L+ + C +G+ K
Sbjct: 646 TYTLLL-SCCTDGRSK 660
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 137/266 (51%), Gaps = 1/266 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
QP+ V Y+ +I S + +N+A N++++M PD VTY TLI G L A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+ +M ++PD +T+S++++ L K G + A + M+ G P++VTY+ +MD +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
A ++ M PD +YSI++ L +++A +F +M +N P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
Y L+D K+G + AW+ M GL PNV T +SLL + + + A L++ M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLK 357
G+ P++ TYT+LL C GR K
Sbjct: 636 LALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 150/282 (53%)
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D +T++ +V L + + +L M++ G +P+ VTY+ L+ Y N +N+A ++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
N M PD +Y +I+ K +D A++++++M ++P+ TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
G + A +L EM +G PN++TY+ ++D K + NA+ L + M++ G P+ TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
+I+++ L G L++A+ VF ++ K + D Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
G PN T ++ + +A +LL+ M+A GL L
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 160/364 (43%), Gaps = 27/364 (7%)
Query: 52 YCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA-------------------- 91
YC+ G I S + F+ G + N ++I A
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWL 354
Query: 92 --QP----DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
QP D Y+T++ +L + K L EM+ P+ VTY LI +
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
L EA+ + NQM PD T+ L+D K G + A ++ M GG PD TYS
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
+++ + A +F M P++ +Y+IM++ K + +AL L++ M
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
P+ VTYS +++ L G + +A + EM + P+ Y L+D K +V+ A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
+ M H G+ PNV T LL + ++ +A E+ Q++L G ++TYT++++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-C 653
Query: 386 CKDG 389
C DG
Sbjct: 654 CTDG 657
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 22/299 (7%)
Query: 16 SLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP 75
+L + K + L +M P+ T+N LI+ Y + A +V + + G +P
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
D +T+ T+I I K D+ M ++Y M A +SPD TY+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAM------------------DMYQRMQAGGLSPDTFTYSV 474
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
+I+ G L A L +MV + P++ T++I++D K + A + M G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 196 EKPDVVTYSSLMD--GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
+PD VTYS +M+ G+C + +AE +F M + PD Y ++++ K V+
Sbjct: 535 FEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
A ++ M + PNV T +SL+ + +I++A+EL+ M + GL P++ TY+ LL
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 128/247 (51%)
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G K D TY++++ + + + M R P+ +Y+ +I+ + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+N+F QM P+ VTY +LID K+G + A ++ M + GL P+ TYS +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
L K H+ A L +M QG PN+ TY I++D K ++A ++++D+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
TY+I++ L G +EA A+ ++M+ P+ Y +++ + G+ +KA + +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 435 QMIARGL 441
M+ GL
Sbjct: 599 AMLHAGL 605
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 55/346 (15%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N+ S + + A+++ QM PD T+ LI+ + G + A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
+ G PDT T++ II GK P++V Y+ ++D K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +A LY +M PD VTY+ ++ G L+EA + +M K+ PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ +LVD K G V++A M+ G +P+V T +SL+ + VN++ +A ++ M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 228 RMELAPDVQSYSIMIN-----------GLCKIKMV------------------------D 252
+ L P +Q+Y+++++ G C M +
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRN 696
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA---WELVNE 295
A N MH+E+ +++D L KSG+ +A WE+ +
Sbjct: 697 HANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQ 742
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 18/196 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ L K H A L +M + P+L T+NI+++ + +A
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLC 106
+ ++ G++PD +T++ ++++ G PD +Y ++D
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K V A+ Y ML + P+V T +L+S F V ++ EA LL M+ + P +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 167 TFSILVDALCKEGKVK 182
T+++L+ + C +G+ K
Sbjct: 646 TYTLLL-SCCTDGRSK 660
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 137/266 (51%), Gaps = 1/266 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
QP+ V Y+ +I S + +N+A N++++M PD VTY TLI G L A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+ +M ++PD +T+S++++ L K G + A + M+ G P++VTY+ +MD +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
A ++ M PD +YSI++ L +++A +F +M +N P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
Y L+D K+G + AW+ M GL PNV T +SLL + + + A L++ M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLK 357
G+ P++ TYT+LL C GR K
Sbjct: 636 LALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 150/282 (53%)
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D +T++ +V L + + +L M++ G +P+ VTY+ L+ Y N +N+A ++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
N M PD +Y +I+ K +D A++++++M ++P+ TYS +I+ L K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
G + A +L EM +G PN++TY+ ++D K + NA+ L + M++ G P+ TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
+I+++ L G L++A+ VF ++ K + D Y ++++ K G ++A M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
G PN T ++ + +A +LL+ M+A GL L
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 160/364 (43%), Gaps = 27/364 (7%)
Query: 52 YCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA-------------------- 91
YC+ G I S + F+ G + N ++I A
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWL 354
Query: 92 --QP----DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
QP D Y+T++ +L + K L EM+ P+ VTY LI +
Sbjct: 355 KRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANY 414
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
L EA+ + NQM PD T+ L+D K G + A ++ M GG PD TYS
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
+++ + A +F M P++ +Y+IM++ K + +AL L++ M
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
P+ VTYS +++ L G + +A + EM + P+ Y L+D K +V+ A
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
+ M H G+ PNV T LL + ++ +A E+ Q++L G ++TYT++++
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-C 653
Query: 386 CKDG 389
C DG
Sbjct: 654 CTDG 657
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 22/299 (7%)
Query: 16 SLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP 75
+L + K + L +M P+ T+N LI+ Y + A +V + + G +P
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
D +T+ T+I I K D+ M ++Y M A +SPD TY+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAM------------------DMYQRMQAGGLSPDTFTYSV 474
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
+I+ G L A L +MV + P++ T++I++D K + A + M G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 196 EKPDVVTYSSLMD--GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
+PD VTYS +M+ G+C + +AE +F M + PD Y ++++ K V+
Sbjct: 535 FEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEK 592
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
A ++ M + PNV T +SL+ + +I++A+EL+ M + GL P++ TY+ LL
Sbjct: 593 AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 128/247 (51%)
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G K D TY++++ + + + M R P+ +Y+ +I+ + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+N+F QM P+ VTY +LID K+G + A ++ M + GL P+ TYS +++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
L K H+ A L +M QG PN+ TY I++D K ++A ++++D+ G+ D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
TY+I++ L G +EA A+ ++M+ P+ Y +++ + G+ +KA + +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 435 QMIARGL 441
M+ GL
Sbjct: 599 AMLHAGL 605
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 55/346 (15%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N+ S + + A+++ QM PD T+ LI+ + G + A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCK 107
+ G PDT T++ II GK P++V Y+ ++D K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +A LY +M PD VTY+ ++ G L+EA + +M K+ PD
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ +LVD K G V++A M+ G +P+V T +SL+ + VN++ +A ++ M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 228 RMELAPDVQSYSIMIN-----------GLCKIKMV------------------------D 252
+ L P +Q+Y+++++ G C M +
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRN 696
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA---WELVNE 295
A N MH+E+ +++D L KSG+ +A WE+ +
Sbjct: 697 HANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQ 742
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 18/196 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ L K H A L +M + P+L T+NI+++ + +A
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLC 106
+ ++ G++PD +T++ ++++ G PD +Y ++D
Sbjct: 526 LYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWG 585
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K V A+ Y ML + P+V T +L+S F V ++ EA LL M+ + P +
Sbjct: 586 KAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQ 645
Query: 167 TFSILVDALCKEGKVK 182
T+++L+ + C +G+ K
Sbjct: 646 TYTLLL-SCCTDGRSK 660
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 174/350 (49%), Gaps = 16/350 (4%)
Query: 55 LGQITSAF-SVLCNIFKRGYQPDTIT----FNTIIKIQG---KLAQPDVVMYSTIIDSLC 106
+G++ S+F S+ N+ R P F + G KL Q + +
Sbjct: 1 MGKVPSSFRSMPANLLVRKTTPSPPAPPRDFRNRTAVGGDSAKLPQNTQAPREPSLRNPF 60
Query: 107 KDKLVNDAYNLYSEMLA-KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS---IN 162
K ++DA +L++ + A RI D+ + +++ + + + + V L Q +LKS
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLF-QHILKSQPNFR 119
Query: 163 PDVYTFSILVDALCK--EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
P TF IL+ C+ + + VL +M+ G +PD VT + C V++A+
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLIDG 279
D+ +T PD +Y+ ++ LCK K + +M + ++ P++V+++ LID
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 280 LCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
+C S + +A LV+++ + G P+ Y++++ C A+ + KKMK +G+ P+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
TY L+ GL K GR+++A+ + ++ GY D TYT ++NG+C+ G
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 18/190 (9%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKL--------- 90
PD T +I + C G++ A ++ + ++ PDT T+N ++K K
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 91 ---------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC 141
+PD+V ++ +ID++C K + +A L S++ PD Y T++ GFC
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 142 IVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
+ + EAVG+ +M + + PD T++ L+ L K G+V+EA+ L M+ G +PD
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTA 336
Query: 202 TYSSLMDGYC 211
TY+SLM+G C
Sbjct: 337 TYTSLMNGMC 346
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 132/273 (48%), Gaps = 12/273 (4%)
Query: 177 KEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME--LAP 233
K + +AK++ + P D+ ++S++ Y + VN +F + + + P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 234 DVQSYSIMINGLCK-----IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
++ I+++ C+ I V LNL M + P+ VT + LC++GR+ +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTILL 347
A +L+ E+ + PP+ TY+ LL LCK + + +M+ + P++ ++TIL+
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT 407
D +C L++A + L G+ D Y ++ G C EA+ + KM++ G
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 408 PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
P+ +TY +I+ L + G ++A L+ M+ G
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
Query: 216 VNKAEDIFNTMTRMELAP-DVQSYSIMINGLCKIKMVDDALNLFKQM--HTENITPNVVT 272
++ A+ +FN++ P D++ ++ ++ I +V+D + LF+ + N P T
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 273 YSSLIDGLCKS--GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
+ L+ C++ IS+ ++N M + GL P+ +T + +LC+ VD A L+K+
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMINGLCKD 388
+ + P+ YTY LL LCK L E F D + +++ D+ ++TI+I+ +C
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYE-FVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
EA+ L+SK+ + G P+ Y I+ +A + ++M G+
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 4 SPP-IIEFNKFFTSLVKTKHYATAISLSQQM--DFRRVMPDLFTFNILINCYCHLGQITS 60
SPP +N L K K +M DF V PDL +F ILI+ C+ +
Sbjct: 190 SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD-VKPDLVSFTILIDNVCNSKNLRE 248
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
A ++ + G++PD +NTI+K C ++A +Y +
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMK------------------GFCTLSKGSEAVGVYKK 290
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG 179
M + + PD +TY TLI G G+++EA L MV PD T++ L++ +C++G
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 186/407 (45%), Gaps = 22/407 (5%)
Query: 61 AFSVLCNIFKR-GYQPDTITFNTIIKIQGKLAQPDVVM----------------YSTIID 103
AF C +R G+ D+ T+N+++ I K Q + ++ ++ +
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMK 237
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
+ K A ++ M + V T L+ KEA L +++ + P
Sbjct: 238 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTP 296
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
++ T+++L++ C+ + EA + MI G KPD+V ++ +++G + + A +F
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
+ M P+V+SY+IMI CK ++ A+ F M + P+ Y+ LI G
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
++ +EL+ EM +G PP+ TY++L+ + ++A + KM I P+++T+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTF 476
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
+++ + + V+++++ KG D +YT++I GL +G EA + +M D
Sbjct: 477 NMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLD 536
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYATE 450
G + Y A F +G ++ ++ R +G F A E
Sbjct: 537 KGMKTPLIDYNKFA-ADFHRGGQP---EIFEELAQRAKFSGKFAAAE 579
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 37 RVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVV 96
R P++ T+ +L+N +C + + A + ++ +G +PD+V
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGL------------------KPDIV 334
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
++ +++ L + + +DA L+ M +K P+V +YT +I FC ++ A+ + M
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
V + PD ++ L+ + K+ +L M + G PD TY++L+
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
A I+N M + E+ P + ++++++ + + ++++M + I P+ +Y+ L
Sbjct: 455 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
I GL G+ +A + EM +G+ +I Y+ + + L ++ K G
Sbjct: 515 IRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 97/219 (44%), Gaps = 17/219 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ N L++++ + AI L M + P++ ++ I+I +C + +A
Sbjct: 331 PDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEY 390
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
++ G QPD + +I ++Q K PD Y+ +I +
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 450
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K+ A +Y++M+ I P + T+ ++ + + + + +M+ K I PD +
Sbjct: 451 QKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNS 510
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
+++L+ L EGK +EA L M+ G K ++ Y+
Sbjct: 511 YTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 183/393 (46%), Gaps = 28/393 (7%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDS 104
F +LI Y LG A VL + K G + P+V+ Y+ +++S
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMG------------------STPNVISYTALMES 183
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS---I 161
+ N+A ++ M + P +TY ++ F + KEA + ++ + +
Sbjct: 184 YGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPL 243
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 221
PD + +++ K G ++A+ V + M+ G VTY+SLM EV+K
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK--- 300
Query: 222 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
I++ M R ++ PDV SY+++I + + ++AL++F++M + P Y+ L+D
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY 341
SG + A + M + P++ +Y+++L A ++ A K++K G PN+
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLLIKG--YNLDVRTYTIMINGLCKDGLFDEALALMS 399
TY L+ G K ++ EV++ + + G N + T + +G CK+ F AL
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYK 478
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKL 432
+ME G P+ +++ + + ++A++L
Sbjct: 479 EMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 164/343 (47%), Gaps = 23/343 (6%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK--IQG---KLAQ-- 92
P++ ++ L+ Y G+ +A ++ + G +P IT+ I+K ++G K A+
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 93 -------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG 139
PD MY +I K A ++S M+ K + VTY +L+S
Sbjct: 232 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS- 290
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
KE + +QM I PDV ++++L+ A + + +EA +V M+ G +P
Sbjct: 291 --FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 348
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
Y+ L+D + + V +A+ +F +M R + PD+ SY+ M++ ++ A FK
Sbjct: 349 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 408
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
++ + PN+VTY +LI G K+ + E+ +M G+ N ++++DA +
Sbjct: 409 RIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 468
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
+ +A+ K+M+ G+ P+ +LL L++A+E+
Sbjct: 469 NFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+ L K +V + L + + N + + + LI K G + A +++ +
Sbjct: 111 VRFKQLKKWNLVSEILEWLRYQNWWNFSE--IDFLMLITAYGKLGNFNGAERVLSVLSKM 168
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
G PNVI+Y++L+++ + +NA ++ ++M+ G P+ TY I+L +G + K+A
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 360 QEVFQDLLIKGYN---LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
+EVF+ LL + + D + Y +MI K G +++A + S M G + VTY
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 285
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 21/205 (10%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ + + + + A+S+ ++M V P +NIL++ + G + A +V
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
Query: 65 LCNIFKRGYQPDTITFNTI-------------------IKIQGKLAQPDVVMYSTIIDSL 105
++ + PD ++ T+ IK+ G +P++V Y T+I
Sbjct: 372 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG--FEPNIVTYGTLIKGY 429
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
K V +Y +M I + TT++ A+G +M + PD
Sbjct: 430 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQ 489
Query: 166 YTFSILVDALCKEGKVKEAKNVLAV 190
++L+ + +++EAK + +
Sbjct: 490 KAKNVLLSLASTQDELEEAKELTGI 514
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 1/342 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
PD+ + +DS + V A L+ E + + ++ L+ C + A
Sbjct: 183 NPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKS 242
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+ N +I D +++I++ K G+V+E + VL M++ G PD ++YS L++G
Sbjct: 243 VFNAKK-GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLG 301
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+N + +IF+ + PD Y+ MI + D+++ +++M E PN+
Sbjct: 302 RTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLE 361
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TYS L+ GL K ++SDA E+ EM SRG+ P +S L LC A+ + +K
Sbjct: 362 TYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKS 421
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+ G + Y +LL L + G+ V+ ++ GY DV Y +++GLC G
Sbjct: 422 RKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHL 481
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
+ A+ +M + G PN Y + L + A KL
Sbjct: 482 ENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 159/354 (44%), Gaps = 3/354 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
DV YS I+ +L + KL + ++ M+ + ++PD+ T + F V ++ A+ L
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP-DVVTYSSLMDGYCL 212
+ + +F+ L+ LC+ V AK+V K G P D +Y+ ++ G+
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSK 267
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+ EV + E + M PD SYS +I GL + ++D++ +F + + P+
Sbjct: 268 LGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANV 327
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y+++I + ++ M PN+ TYS L+ L K V +A+ + ++M
Sbjct: 328 YNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEML 387
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+G+LP T L LC G A ++Q G + Y +++ L + G
Sbjct: 388 SRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCG 447
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
L + +M+++G + YE I+ L G + A ++ + + +G F
Sbjct: 448 MLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 184/400 (46%), Gaps = 23/400 (5%)
Query: 16 SLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP 75
+L + K ++ + + + M V PDL I ++ + + + A + G +
Sbjct: 160 ALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKC 219
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR--ISPDVVTY 133
T +FN +++ LC+ V+ A ++++ AK+ I D +Y
Sbjct: 220 STESFNALLRC------------------LCERSHVSAAKSVFN---AKKGNIPFDSCSY 258
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
+ISG+ +G+++E +L +MV PD ++S L++ L + G++ ++ + +
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 194 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
G PD Y++++ + + +++ + M E P++++YS +++GL K + V D
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
AL +F++M + + P +S + LC G A + + G + Y LL
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLK 438
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
L + +++ +M+ G +V Y ++DGLC G L++A V ++ + KG+
Sbjct: 439 RLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
+ Y+ + + L + A L K++ T NA ++
Sbjct: 499 NRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 34/298 (11%)
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
+ DV ++S+++ AL + +VL M+ G PD+ + MD + V+ V +A
Sbjct: 147 VTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAI 206
Query: 221 DI---------------FNTMTRM-------------------ELAPDVQSYSIMINGLC 246
++ FN + R + D SY+IMI+G
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWS 266
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K+ V++ + K+M P+ ++YS LI+GL ++GRI+D+ E+ + + +G P+
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
Y++++ D ++ ++M + PN+ TY+ L+ GL KG ++ DA E+F+++
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
L +G T + LC G A+ + K GC + Y++++ L + G
Sbjct: 387 LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G DV +YS ++ + D+ M + PD++ +I ++ ++ V A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+ LF++ + + + ++++L+ LC+ +S A + N +P + +Y+ ++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKG-NIPFDSCSYNIMISG 264
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
K V+ ++K+M G P+ +Y+ L++GL + GR+ D+ E+F ++ KG D
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPD 324
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
Y MI FDE++ +M D C PN TY ++ L + A ++
Sbjct: 325 ANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE 384
Query: 435 QMIARGLL--TGL 445
+M++RG+L TGL
Sbjct: 385 EMLSRGVLPTTGL 397
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 183/393 (46%), Gaps = 28/393 (7%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDS 104
F +LI Y LG A VL + K G + P+V+ Y+ +++S
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMG------------------STPNVISYTALMES 190
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS---I 161
+ N+A ++ M + P +TY ++ F + KEA + ++ + +
Sbjct: 191 YGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPL 250
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 221
PD + +++ K G ++A+ V + M+ G VTY+SLM EV+K
Sbjct: 251 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK--- 307
Query: 222 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
I++ M R ++ PDV SY+++I + + ++AL++F++M + P Y+ L+D
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY 341
SG + A + M + P++ +Y+++L A ++ A K++K G PN+
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 427
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLLIKG--YNLDVRTYTIMINGLCKDGLFDEALALMS 399
TY L+ G K ++ EV++ + + G N + T + +G CK+ F AL
Sbjct: 428 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYK 485
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKL 432
+ME G P+ +++ + + ++A++L
Sbjct: 486 EMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 164/343 (47%), Gaps = 23/343 (6%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK--IQG---KLAQ-- 92
P++ ++ L+ Y G+ +A ++ + G +P IT+ I+K ++G K A+
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 93 -------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG 139
PD MY +I K A ++S M+ K + VTY +L+S
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS- 297
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
KE + +QM I PDV ++++L+ A + + +EA +V M+ G +P
Sbjct: 298 --FETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 355
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
Y+ L+D + + V +A+ +F +M R + PD+ SY+ M++ ++ A FK
Sbjct: 356 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 415
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
++ + PN+VTY +LI G K+ + E+ +M G+ N ++++DA +
Sbjct: 416 RIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 475
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
+ +A+ K+M+ G+ P+ +LL L++A+E+
Sbjct: 476 NFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+ L K +V + L + + N + + + LI K G + A +++ +
Sbjct: 118 VRFKQLKKWNLVSEILEWLRYQNWWNFSE--IDFLMLITAYGKLGNFNGAERVLSVLSKM 175
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
G PNVI+Y++L+++ + +NA ++ ++M+ G P+ TY I+L +G + K+A
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 360 QEVFQDLLIKGYN---LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
+EVF+ LL + + D + Y +MI K G +++A + S M G + VTY
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 292
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 181/374 (48%), Gaps = 20/374 (5%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYS 99
P + TFN+L++ I A VL +++ G A D +Y+
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVL----------------RLVQESGMTA--DCKLYT 506
Query: 100 TIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK 159
T+I S K V+ + ++ +M + ++ T+ LI G GQ+ +A G + K
Sbjct: 507 TLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK 566
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE--KPDVVTYSSLMDGYCLVNEVN 217
++ PD F+ L+ A + G V A +VLA M PD ++ +LM C +V
Sbjct: 567 NVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVE 626
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+A++++ + + + + Y+I +N K D A +++K M +++TP+ V +S+LI
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
D + + +A+ ++ + S+G+ I+YSSL+ A C A+ L +K+K +
Sbjct: 687 DVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLR 746
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
P + T L+ LC+G +L A E ++ G + TY++++ + F+ + L
Sbjct: 747 PTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKL 806
Query: 398 MSKMEDNGCTPNAV 411
+S+ + +G +PN +
Sbjct: 807 LSQAKGDGVSPNLI 820
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 145/318 (45%), Gaps = 2/318 (0%)
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
++ D YTTLIS G++ + +QM + +++TF L+D + G+V +A
Sbjct: 498 MTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAF 557
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR--MELAPDVQSYSIMIN 243
++ KPD V +++L+ V++A D+ M + PD S ++
Sbjct: 558 GAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMK 617
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
C V+ A +++ +H I Y+ ++ KSG A + +M + + P
Sbjct: 618 ACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTP 677
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+ + +S+L+D +D A +++ K QGI +Y+ L+ C K A E++
Sbjct: 678 DEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELY 737
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+ + + T +I LC+ +A+ + +++ G PN +TY +++ A +K
Sbjct: 738 EKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERK 797
Query: 424 GDNDKAEKLLRQMIARGL 441
D + + KLL Q G+
Sbjct: 798 DDFEVSFKLLSQAKGDGV 815
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 151/336 (44%), Gaps = 26/336 (7%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+ +S K+ + QM V +L TF LI+ GQ+ AF +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR--IS 127
+ +PD + FN +I G+ V+ A+++ +EM A+ I
Sbjct: 565 SKNVKPDRVVFNALISACGQSGA------------------VDRAFDVLAEMKAETHPID 606
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK---SINPDVYTFSILVDALCKEGKVKEA 184
PD ++ L+ C GQ++ A + QM+ K P+VYT I V++ K G A
Sbjct: 607 PDHISIGALMKACCNAGQVERAKEVY-QMIHKYGIRGTPEVYT--IAVNSCSKSGDWDFA 663
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
++ M + PD V +S+L+D +++A I + SYS ++
Sbjct: 664 CSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGA 723
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
C K AL L++++ + + P + T ++LI LC+ ++ A E ++E+ + GL PN
Sbjct: 724 CCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPN 783
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
ITYS L+ A + + + L+ + K G+ PN+
Sbjct: 784 TITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 114/256 (44%), Gaps = 37/256 (14%)
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
T++ L P + +++++++ + ++ A + + + +T + Y++LI KSG+
Sbjct: 458 FTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGK 517
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLD-------------------------------- 313
+ +E+ ++M + G+ N+ T+ +L+D
Sbjct: 518 VDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNA 577
Query: 314 ---ALCKNHHVDNAISLIKKMKHQG--ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
A ++ VD A ++ +MK + I P+ + L+ C G+++ A+EV+Q +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK 637
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
G YTI +N K G +D A ++ M++ TP+ V + +I D+
Sbjct: 638 YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDE 697
Query: 429 AEKLLRQMIARGLLTG 444
A +L+ ++G+ G
Sbjct: 698 AFGILQDAKSQGIRLG 713
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 186/368 (50%), Gaps = 26/368 (7%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM- 156
YS I ++C+ L+ + +L M ++ D L+ G+ + A+G+L+ M
Sbjct: 95 YSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYME 154
Query: 157 -VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK---------------PDV 200
+ +NP VY S+L+ AL K+ +++ A ++L +++ + P
Sbjct: 155 ELGDCLNPSVYD-SVLI-ALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGT 212
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFK 259
V + L+ G + ++ + +F + M+ D SY+I I+G +D AL+LFK
Sbjct: 213 VAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFK 272
Query: 260 QM------HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
+M + + P++ TY+SLI LC G+ DA + +E+ G P+ TY L+
Sbjct: 273 EMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ 332
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
CK++ +D+A+ + +M++ G +P+ Y LLDG K ++ +A ++F+ ++ +G
Sbjct: 333 GCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRA 392
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
TY I+I+GL ++G + L ++ G +A+T+ I+ L ++G + A KL+
Sbjct: 393 SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLV 452
Query: 434 RQMIARGL 441
+M RG
Sbjct: 453 EEMETRGF 460
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 142/300 (47%), Gaps = 29/300 (9%)
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
KR D +Y I GF G L A+ L +M +S VY S
Sbjct: 242 KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERS---SVYGSSF------------- 285
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
PD+ TY+SL+ CL + A +++ + PD +Y I+I
Sbjct: 286 -------------GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ 332
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
G CK +DDA+ ++ +M P+ + Y+ L+DG K+ ++++A +L +M G+
Sbjct: 333 GCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRA 392
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+ TY+ L+D L +N + +L +K +G + T++I+ LC+ G+L+ A ++
Sbjct: 393 SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLV 452
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
+++ +G+++D+ T + ++ G K G +D LM + + PN + + + A ++
Sbjct: 453 EEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKR 512
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 191/445 (42%), Gaps = 54/445 (12%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +N +K + A L ++M V +T+NILI+ G+ + F++
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTL 416
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
C++ K+G D ITF +I+ +Q LC++ + A L EM +
Sbjct: 417 FCDLKKKGQFVDAITF-SIVGLQ-----------------LCREGKLEGAVKLVEEMETR 458
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
S D+VT ++L+ GF G+ L+ + ++ P+V ++ V+A K + K+
Sbjct: 459 GFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD- 517
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED---------------------IF 223
K+ + G D+++ D EV+ ED +F
Sbjct: 518 KDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLF 577
Query: 224 NTM--TRMELAPDVQSYSI-MINGLCKIKMVDDALNL-------FKQMHTENITPNVVTY 273
R+E PD S+ + M+N I + L+L F M ++T TY
Sbjct: 578 GLARGQRVEAKPD--SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTS--YTY 633
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
+S++ K G A ++++M ++ TY+ ++ L K D A +++ ++
Sbjct: 634 NSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTK 693
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
QG ++ Y L++ L K RL +A ++F + G N DV +Y MI K G E
Sbjct: 694 QGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKE 753
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIY 418
A + M D GC PN VT I+ Y
Sbjct: 754 AYKYLKAMLDAGCLPNHVTDTILDY 778
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%)
Query: 119 SEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKE 178
S + PD+ TY +LI C+ G+ K+A+ + +++ + PD T+ IL+ CK
Sbjct: 278 SSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKS 337
Query: 179 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 238
++ +A + M G PD + Y+ L+DG +V +A +F M + + +Y
Sbjct: 338 YRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTY 397
Query: 239 SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS 298
+I+I+GL + + LF + + + +T+S + LC+ G++ A +LV EM +
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 299 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
RG +++T SSLL K D L+K ++ ++PNV + ++ K + KD
Sbjct: 458 RGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD 517
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 12/282 (4%)
Query: 36 RRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDV 95
+R D +++NI I+ + G + +A S+ + +R + G PD+
Sbjct: 242 KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERS------------SVYGSSFGPDI 289
Query: 96 VMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQ 155
Y+++I LC DA ++ E+ PD TY LI G C ++ +A+ + +
Sbjct: 290 CTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGE 349
Query: 156 MVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 215
M PD ++ L+D K KV EA + M++ G + TY+ L+DG
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 216 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
+F + + D ++SI+ LC+ ++ A+ L ++M T + ++VT SS
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 276 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
L+ G K GR +L+ + L PNV+ +++ ++A K
Sbjct: 470 LLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLL---NQMVLKSINPDVYTFSILVDALCKEG 179
AK S DV T +S + G L A L N M + + YT++ ++ + K+G
Sbjct: 587 AKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTS--YTYNSMMSSFVKKG 644
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
+ A+ VL M + D+ TY+ ++ G + + A + + +T+ D+ Y+
Sbjct: 645 YFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYN 704
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+IN L K +D+A LF M + I P+VV+Y+++I+ K+G++ +A++ + M
Sbjct: 705 TLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA 764
Query: 300 GLPPNVITYSSLLDALCK 317
G PN +T ++LD L K
Sbjct: 765 GCLPNHVT-DTILDYLGK 781
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+YS + +C+ ++ + +L M + + + L+D L +SG+ A +++ M
Sbjct: 94 AYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYM 153
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-----KHQ----------GILPNVY 341
G N Y S+L AL K H + A+S++ K+ H LP
Sbjct: 154 EELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTV 213
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
LL GL + + + VF+ L +K + D +Y I I+G G D AL+L +
Sbjct: 214 AVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKE 273
Query: 401 MEDNGCT------PNAVTYEIIIYAL 420
M++ P+ TY +I+ L
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVL 299
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 207/488 (42%), Gaps = 69/488 (14%)
Query: 43 FTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ---------- 92
+T+N +I+ Y GQI A + + G P T+TFNT+I I G Q
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT 358
Query: 93 ------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
PD Y+ +I K+ + A + EM + PD V+Y TL+ F I +
Sbjct: 359 MKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 147 KEAVGLLNQMVLKSINPDVYTFSIL----------------------------------V 172
+EA GL+ +M ++ D YT S L +
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI 478
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
DA + G + EA+ V + + K V+ Y+ ++ Y + KA ++F +M +
Sbjct: 479 DAYGERGYLSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
PD +Y+ ++ L M ++M + + Y ++I K G+++ A E+
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
EM + P+V+ Y L++A +V A+S ++ MK GI N Y L+ K
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 353 GGRLKDAQEVFQDLLI---KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
G L +A+ +++ LL K DV T MIN + + +A A+ M+ G N
Sbjct: 658 VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EAN 716
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT---------GLF-----YATEFEAVE 455
T+ +++ + G ++A ++ +QM +LT GLF + E +
Sbjct: 717 EFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFK 776
Query: 456 ELSAPGLR 463
E+ + G++
Sbjct: 777 EMVSSGIQ 784
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 200/494 (40%), Gaps = 59/494 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + FN SL + M PD T+NILI+ + I A +
Sbjct: 331 PTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAY 389
Query: 65 LCNIFKRGYQPDTITFNTII----------KIQGKLAQPD--------------VVMY-- 98
+ G +PD +++ T++ + +G +A+ D MY
Sbjct: 390 FKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVE 449
Query: 99 -STIIDSLCKDKLVNDAYNLYSEMLAKRISP-----------------------DVVTYT 134
+ S K + A N+ SE + I V+ Y
Sbjct: 450 AEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYN 509
Query: 135 TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 194
+I + I ++A L M+ + PD T++ LV L + + L M +
Sbjct: 510 VMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRET 569
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G D + Y +++ + + ++N AE+++ M + PDV Y ++IN V A
Sbjct: 570 GYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQA 629
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM---HSRGLPPNVITYSSL 311
++ + M I N V Y+SLI K G + +A + ++ ++ P+V T + +
Sbjct: 630 MSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCM 689
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
++ + V A ++ MK +G N +T+ ++L K GR ++A ++ + +
Sbjct: 690 INLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKI 748
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA-- 429
D +Y ++ DG F EA+ +M +G P+ T++ + L + G + KA
Sbjct: 749 LTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVR 808
Query: 430 --EKLLRQMIARGL 441
E++ ++ I RGL
Sbjct: 809 KIEEIRKKEIKRGL 822
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 168/372 (45%), Gaps = 39/372 (10%)
Query: 31 QQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKR----GYQPDTITFNTIIKI 86
Q+++ R V+ +N++I Y I+ + C +F+ G PD T+NT+++I
Sbjct: 498 QEVNKRTVIE----YNVMIKAY----GISKSCEKACELFESMMSYGVTPDKCTYNTLVQI 549
Query: 87 QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
LA D + + +M D + Y +IS F +GQL
Sbjct: 550 ---LASAD---------------MPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQL 591
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
A + +MV +I PDV + +L++A G V++A + + M + G + V Y+SL
Sbjct: 592 NMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSL 651
Query: 207 MDGYCLVNEVNKAEDIFNTMTR---MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+ Y V +++AE I+ + + PDV + + MIN + MV A +F M
Sbjct: 652 IKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ 711
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
N T++ ++ K+GR +A ++ +M + + ++Y+S+L +
Sbjct: 712 RG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKE 770
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA----QEVFQDLLIKGYNLDVRTYT 379
A+ K+M GI P+ T+ L L K G K A +E+ + + +G L + T +
Sbjct: 771 AVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLS 830
Query: 380 IMIN-GLCKDGL 390
++ G C D L
Sbjct: 831 SLVGIGDCVDEL 842
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 169/415 (40%), Gaps = 68/415 (16%)
Query: 73 YQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVT 132
Y+ + I +N +++I GK CK + V +L+ EM+ K I P T
Sbjct: 183 YELNVIHYNIMLRILGKA---------------CKWRYVQ---SLWDEMIRKGIKPINST 224
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPD---------------------------- 164
Y TLI + G A+ L +M + PD
Sbjct: 225 YGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWS 284
Query: 165 -------------VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
YT++ ++D K G++KEA M++ G P VT+++++ Y
Sbjct: 285 CDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYG 344
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
++ + + TM ++ APD ++Y+I+I+ K ++ A FK+M + + P+ V
Sbjct: 345 NNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPV 403
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
+Y +L+ + +A L+ EM + + T S+L + ++ + S K+
Sbjct: 404 SYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF 463
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT---YTIMINGLCKD 388
G + + Y+ +D + G L +A+ VF I ++ RT Y +MI
Sbjct: 464 HVAGNMSSE-GYSANIDAYGERGYLSEAERVF----ICCQEVNKRTVIEYNVMIKAYGIS 518
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
++A L M G TP+ TY ++ L K L +M G ++
Sbjct: 519 KSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS 573
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 132/328 (40%), Gaps = 30/328 (9%)
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
+V+ Y ++ + + L ++M+ K I P T+ L+D K G A L
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
M K G +PD VT ++ Y E KAE+ F + C
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWS------------------CDE 287
Query: 249 KMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 308
D + L + TY+++ID KSG+I +A E M G+ P +T+
Sbjct: 288 NKADSHVCL-----------SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTF 336
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
++++ N + SL+K MK P+ TY IL+ K ++ A F+++
Sbjct: 337 NTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKD 395
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
G D +Y ++ + +EA L+++M+D+ + T + + +K
Sbjct: 396 DGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEK 455
Query: 429 AEKLLRQMIARGLLTGLFYATEFEAVEE 456
+ ++ G ++ Y+ +A E
Sbjct: 456 SWSWFKRFHVAGNMSSEGYSANIDAYGE 483
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 186/380 (48%), Gaps = 8/380 (2%)
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ N + ++P I ++K L+ ++Y+ I+D L K + + + ++ EM +
Sbjct: 115 VVNRNRSDWKPAYILSQLVVKQSVHLSSS--MLYNEILDVLGKMRRFEEFHQVFDEMSKR 172
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ TY L++ + ++ EAVG+ + I+ D+ F L+ LC+ V+ A
Sbjct: 173 DGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA 232
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ + + D+ + +++G+C++ V++A+ + + + PDV SY MIN
Sbjct: 233 ETLFCSRRREF-GCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINA 291
Query: 245 LCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
L K + A+ L++ M P+V +++ID LC RI +A E+ E+ +G PN
Sbjct: 292 LTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPN 351
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQG--ILPNVYTYTILLDGLCKGGRLKDAQEV 362
V+TY+SLL LCK + L+++M+ +G PN T++ LL R KD V
Sbjct: 352 VVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK---YSQRSKDVDIV 408
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
+ + + Y +M + ++ + S+ME +G P+ TY I I+ L
Sbjct: 409 LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHT 468
Query: 423 KGDNDKAEKLLRQMIARGLL 442
KG +A ++M+++G++
Sbjct: 469 KGKIGEALSYFQEMMSKGMV 488
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 7 IIEFNKFFTSLVKTKH--YATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
++ F+ L + KH +A + S++ +F D+ N+++N +C LG + A
Sbjct: 213 LVAFHGLLMWLCRYKHVEFAETLFCSRRREF---GCDIKAMNMILNGWCVLGNVHEAKRF 269
Query: 65 LCNIFKRGYQPDTITFNTIIKI---QGKLAQ--------------PDVVMYSTIIDSLCK 107
+I +PD +++ T+I +GKL + PDV + + +ID+LC
Sbjct: 270 WKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCF 329
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK--SINPDV 165
K + +A ++ E+ K P+VVTY +L+ C + + ++ L+ +M LK S +P+
Sbjct: 330 KKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND 389
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
TFS L L + K+ VL M K + Y+ + Y ++ K +I++
Sbjct: 390 VTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSE 446
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
M R L PD ++Y+I I+GL + +AL+ F++M ++ + P T
Sbjct: 447 MERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 51/218 (23%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ + +L K A+ L + M R PD+ N +I+ C +I A V
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEV 339
Query: 65 LCNIFKRGYQPDTITFNTIIK-------------------IQGKLAQPDVVMYS------ 99
I ++G P+ +T+N+++K ++G P+ V +S
Sbjct: 340 FREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYS 399
Query: 100 -------TIIDSLCKDK--LVNDAYNL-----------------YSEMLAKRISPDVVTY 133
+++ + K+K + +D YNL +SEM + PD TY
Sbjct: 400 QRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTY 459
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
T I G G++ EA+ +M+ K + P+ T +L
Sbjct: 460 TIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 184/407 (45%), Gaps = 22/407 (5%)
Query: 61 AFSVLCNIFKR-GYQPDTITFNTIIKIQGKLAQPDVVM----------------YSTIID 103
AF C +R G+ D+ T+N+++ I K Q + ++ ++ +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMK 236
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
+ K A ++ M + V T L+ KEA L +++ + P
Sbjct: 237 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTP 295
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
++ T+++L++ C+ + EA + MI G KPD+V ++ +++G + + A +F
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
+ M P+V+SY+IMI CK ++ A+ F M + P+ Y+ LI G
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
++ +EL+ EM +G PP+ TY++L+ + ++ + KM I P+++T+
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 475
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
+++ + + V+ +++ KG D +YT++I GL +G EA + +M D
Sbjct: 476 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLD 535
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYATE 450
G + Y A F +G ++ ++ R +G F A E
Sbjct: 536 KGMKTPLIDYNKFA-ADFHRGGQP---EIFEELAQRAKFSGKFAAAE 578
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 132/299 (44%), Gaps = 18/299 (6%)
Query: 37 RVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVV 96
R P++ T+ +L+N +C + + A + ++ G +PD + N V
Sbjct: 292 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN--------------V 337
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
M ++ S+ K +DA L+ M +K P+V +YT +I FC ++ A+ + M
Sbjct: 338 MLEGLLRSMKK----SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
V + PD ++ L+ + K+ +L M + G PD TY++L+
Sbjct: 394 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 453
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
I+N M + E+ P + ++++++ + + ++ +M + I P+ +Y+ L
Sbjct: 454 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
I GL G+ +A + EM +G+ +I Y+ + + L ++ K G
Sbjct: 514 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ N L+++ + AI L M + P++ ++ I+I +C + +A
Sbjct: 330 PDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEY 389
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
++ G QPD + +I ++Q K PD Y+ +I +
Sbjct: 390 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 449
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K+ +Y++M+ I P + T+ ++ + + + + ++M+ K I PD +
Sbjct: 450 QKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNS 509
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
+++L+ L EGK +EA L M+ G K ++ Y+
Sbjct: 510 YTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 198/438 (45%), Gaps = 23/438 (5%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
+ FN + H + A SL ++M+ + + PD T+NIL++ + G I +A
Sbjct: 341 VTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRK 400
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS 127
I K G PDT+T ++ I LC+ K+V + + +EM I
Sbjct: 401 IRKVGLFPDTVTHRAVLHI------------------LCQRKMVAEVEAVIAEMDRNSIR 442
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
D + ++ + G + +A L + L + T + ++D ++G EA+ V
Sbjct: 443 IDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLAAVIDVYAEKGLWVEAETV 501
Query: 188 L-AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
G++ DV+ Y+ ++ Y KA +F M PD +Y+ + L
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLA 561
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
+ +VD+A + +M P TY+++I + G +SDA +L M G+ PN +
Sbjct: 562 GVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEV 621
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
Y SL++ ++ V+ AI + M+ G+ N T L+ K G L++A+ V+ +
Sbjct: 622 VYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Query: 367 LIKGYNLDVRTYTIMINGLCKD-GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
DV M++ LC D G+ EA ++ + + + G T + +++ ++Y G
Sbjct: 682 KDSEGGPDVAASNSMLS-LCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGM 739
Query: 426 NDKAEKLLRQMIARGLLT 443
D+A ++ +M GLL+
Sbjct: 740 LDEAIEVAEEMRESGLLS 757
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 196/456 (42%), Gaps = 40/456 (8%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-----------------KI 86
TFN LI+ Y G++ A ++ + K G DT+TFNT+I K+
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 87 QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
+ K PD Y+ ++ + A Y ++ + PD VT+ ++ C +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV----T 202
E ++ +M SI D ++ +++ EG V +AK + + D V T
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF-----QLDCVLSSTT 481
Query: 203 YSSLMDGYCLVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
++++D Y +AE +F M DV Y++MI K K+ + AL+LFK M
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+ P+ TY+SL L + +A ++ EM G P TY++++ + + +
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
+A+ L + M+ G+ PN Y L++G + G +++A + F+ + G + T +
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
I K G +EA + KM+D+ P+ ++ G +AE + + +G
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT 721
Query: 442 LTGLFYAT-------------EFEAVEELSAPGLRS 464
+ +AT E EE+ GL S
Sbjct: 722 CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLS 757
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 173/402 (43%), Gaps = 22/402 (5%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
D+ +N++I Y A S+ + +G PD T+N++ ++ LA D
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQM---LAGVD------ 564
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
LV++A + +EML P TY +I+ + +G L +AV L M
Sbjct: 565 ---------LVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
+ P+ + L++ + G V+EA +M + G + + + +SL+ Y V + +A
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+++ M E PDV + + M++ + +V +A ++F + E T +V+++++++
Sbjct: 676 RVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR-EKGTCDVISFATMMYLY 734
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPN 339
G + +A E+ EM GL + +++ ++ + + L +M + +L +
Sbjct: 735 KGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLD 794
Query: 340 VYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
T+ L L KGG +A Q + L T + GL+ AL
Sbjct: 795 WGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATL--FSAMGLYAYALESCQ 852
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ Y +IY GD D A K +M +GL
Sbjct: 853 ELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGL 894
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 180/416 (43%), Gaps = 24/416 (5%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++E+N + K K + A+SL + M + PD T+N L + + A +L
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
+ G +P T Y+ +I S + L++DA +LY M +
Sbjct: 575 EMLDSGCKPGCKT------------------YAAMIASYVRLGLLSDAVDLYEAMEKTGV 616
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
P+ V Y +LI+GF G ++EA+ M + + + L+ A K G ++EA+
Sbjct: 617 KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARR 676
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
V M PDV +S++ + V++AE IFN + R + DV S++ M+
Sbjct: 677 VYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNAL-REKGTCDVISFATMMYLYK 735
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH-SRGLPPNV 305
+ M+D+A+ + ++M + + +++ ++ G++S+ EL +EM R L +
Sbjct: 736 GMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDW 795
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
T+ +L L K A+S ++ ++ + T I G A E Q+
Sbjct: 796 GTFKTLFTLLKKGGVPSEAVSQLQTAYNEA--KPLATPAITATLFSAMGLYAYALESCQE 853
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT--YEIIIYA 419
L + Y +I G D AL +M++ G P+ VT Y + IY
Sbjct: 854 LTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYG 909
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 181/451 (40%), Gaps = 82/451 (18%)
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVV-----------------MYSTIIDSLCKDKLVND 113
+ Y P+ I +N +++ G+ + D + Y ++D K LV +
Sbjct: 139 QSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKE 198
Query: 114 AYNLYSEMLAKRIS-PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
A L+ + + +R+ PD VT T++ F G+ A ++ D+ + +
Sbjct: 199 AL-LWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS----I 253
Query: 173 DALCKEGKVKEAKNVLAV----MIKGG-------------------EKPDVV-TYSSLMD 208
D K G + N+ + K G KP + T+++L+D
Sbjct: 254 DDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLID 313
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
Y +N A ++F+ M + + D +++ MI+ + +A +L K+M + I+P
Sbjct: 314 LYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISP 373
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
+ TY+ L+ +G I A E ++ GL P+ +T+ ++L LC+ V ++I
Sbjct: 374 DTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVI 433
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI-------------------- 368
+M I + ++ +++ G + A+ +F+ +
Sbjct: 434 AEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKG 493
Query: 369 ---------------KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G DV Y +MI K L ++AL+L M++ G P+ TY
Sbjct: 494 LWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTY 553
Query: 414 EIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
+ L D+A+++L +M+ G G
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGCKPG 584
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 161/383 (42%), Gaps = 23/383 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + S V+ + A+ L + M+ V P+ + LIN + G + A
Sbjct: 583 PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQY 642
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLA-----------------QPDVVMYSTIIDSLCK 107
+ + G Q + I ++IK K+ PDV ++++ SLC
Sbjct: 643 FRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCA 701
Query: 108 D-KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
D +V++A ++++ L ++ + DV+++ T++ + +G L EA+ + +M + D
Sbjct: 702 DLGIVSEAESIFN-ALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCT 760
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN-KAEDIFNT 225
+F+ ++ +G++ E + M+ E+ ++ + + + L+ + +E +
Sbjct: 761 SFNQVMACYAADGQLSECCELFHEMLV--ERKLLLDWGTFKTLFTLLKKGGVPSEAVSQL 818
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
T A + + +I + + AL +++ + I Y+++I SG
Sbjct: 819 QTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGD 878
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
I A + M +GL P+++T + L+ K V+ + ++ + P+ +
Sbjct: 879 IDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKA 938
Query: 346 LLDGLCKGGRLKDAQEVFQDLLI 368
+ D R A V +++ I
Sbjct: 939 VRDAYVSANRQDLADVVKKEMSI 961
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 213/485 (43%), Gaps = 56/485 (11%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P + +N+ +++ ++ A+ L ++M F T L+ +
Sbjct: 50 PKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGR 109
Query: 63 SVLCNIFKRGYQPDTITFNTII-------------KIQGKLAQPDVVMYSTIIDSLCKDK 109
+ + + G + + N++I K+ + ++ +++I+ S K
Sbjct: 110 QIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLG 169
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
V+DA L EM + PD+VT+ +L+SG+ G K+A+ +L +M + + P + S
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSIS 229
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L+ A+ + G +K K + +++ DV ++L+D Y + A +F+ M
Sbjct: 230 SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD-- 287
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
A ++ +++ +++GL ++ DA L +M E I P+ +T++SL G G+ A
Sbjct: 288 --AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA 345
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL-- 347
+++ +M +G+ PNV++++++ KN + NA+ + KM+ +G+ PN T + LL
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 348 -------------DGLC--------------------KGGRLKDAQEVFQDLLIKGYNLD 374
G C K G L+ A E+F + N
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI----KNKS 461
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
+ ++ M+ G G +E +A S M + G P+A+T+ ++ G + K
Sbjct: 462 LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFD 521
Query: 435 QMIAR 439
M +R
Sbjct: 522 LMRSR 526
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 196/438 (44%), Gaps = 47/438 (10%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N +S K + AI L +M+ + PD+ T+N L++ Y G A +VL +
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
G +P T + +++++ +A+P + I + +L ++ D
Sbjct: 218 IAGLKPSTSSISSLLQ---AVAEPGHLKLGKAI---------------HGYILRNQLWYD 259
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V TTLI + G L A + + M K+I ++ LV L +K+A+ ++
Sbjct: 260 VYVETTLIDMYIKTGYLPYARMVFDMMDAKNI----VAWNSLVSGLSYACLLKDAEALMI 315
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M K G KPD +T++SL GY + + KA D+ M +AP+V S++ + +G K
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLID-----GLCKSGRISDAWELVNEMHSRGLPPN 304
+AL +F +M E + PN T S+L+ L SG+ E+H L N
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK---------EVHGFCLRKN 426
Query: 305 VI----TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+I ++L+D K+ + +AI + +K++ + ++ +L G GR ++
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGI 482
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKD-GLFDEALALMSKMEDN-GCTPNAVTYEIIIY 418
F +L G D T+T +++ +CK+ GL E M G P ++
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLS-VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD 541
Query: 419 ALFQKGDNDKAEKLLRQM 436
L + G D+A ++ M
Sbjct: 542 LLGRSGYLDEAWDFIQTM 559
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 143/329 (43%), Gaps = 35/329 (10%)
Query: 144 GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
G ++AV L +M T L+ + E + + +++ G + +V
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMC 127
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+SL+ Y ++ + +FN+M L+ S++ +++ K+ VDDA+ L +M
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD- 322
+ P++VT++SL+ G G DA ++ M GL P+ + SSLL A+ + H+
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 323 -NAI-----------------SLIKKMKHQGILP------------NVYTYTILLDGLCK 352
AI +LI G LP N+ + L+ GL
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
LKDA+ + + +G D T+ + +G G ++AL ++ KM++ G PN V+
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ I + G+ A K+ +M G+
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 153/364 (42%), Gaps = 29/364 (7%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M + I+ +N + L A +L +M+ + PD T+N L + Y LG+
Sbjct: 285 MMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
A V I K++ K P+VV ++ I K+ +A ++ +
Sbjct: 345 ALDV------------------IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M + + P+ T +TL+ + L + + K++ D Y + LVD K G
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGD 446
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
++ A + G + + +++ ++ GY + + F+ M + PD +++
Sbjct: 447 LQSAIEIFW----GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 241 MINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+++ +V + F M + I P + S ++D L +SG + +AW+ + M
Sbjct: 503 VLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM--- 559
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP-NVYTYTILLDGLCKGGRLKD 358
L P+ + + L + CK H D ++ I + Q + P N Y ++++ R +D
Sbjct: 560 SLKPDATIWGAFLSS-CKIHR-DLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWED 617
Query: 359 AQEV 362
+ +
Sbjct: 618 VERI 621
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 146/343 (42%), Gaps = 41/343 (11%)
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
VV+ + G C+ ++G N++ + D ++ +V + G ++A +
Sbjct: 25 VVSASMGFYGRCV------SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFR 78
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M G K T L+ + I + R+ L +V M N L +
Sbjct: 79 EMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS----MCNSLIVMY 134
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
+ L L +++ N+ +++S++ K G + DA L++EM GL P+++T++
Sbjct: 135 SRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWN 194
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ----- 364
SLL +AI+++K+M+ G+ P+ + + LL + + G LK + +
Sbjct: 195 SLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRN 254
Query: 365 -------------DLLIK-GY------------NLDVRTYTIMINGLCKDGLFDEALALM 398
D+ IK GY ++ + +++GL L +A ALM
Sbjct: 255 QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALM 314
Query: 399 SKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ME G P+A+T+ + G +KA ++ +M +G+
Sbjct: 315 IRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 210/464 (45%), Gaps = 33/464 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N+ +LVK ++ A+++ + ++ + TF IL+ C G+I +
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI 285
Query: 65 LCNIFKRGYQPDTITFNTIIKI---QGKL--------------AQPDVVMYSTIIDSLCK 107
L + + +PD + +IK +G L +PDV+ Y T++ LCK
Sbjct: 286 LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCK 345
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
D V Y L+ EM K+I D Y LI GF G+++ A L +V D+
Sbjct: 346 DGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ ++ LC +V +A + V I+ +PD T S +M Y ++N ++ D N +
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS---DFSNVLE 462
Query: 228 RM-ELAPDVQSYSIMINGLCKIKMVDD-----ALNLFKQMHTENITPNVVTYSSLIDGLC 281
R+ EL V Y + K+ D+ AL++F + T+ +V Y+ L++ L
Sbjct: 463 RIGELGYPVSDY---LTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALY 518
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY 341
K G I + L EM G P+ +YS + + V A S +K+ +P++
Sbjct: 519 KMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLL--IKGYNLDVRTYTIMINGLCKDGLFDEALALMS 399
Y L GLC+ G + + ++ L ++ ++ + Y + + +CK ++ + ++
Sbjct: 579 AYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFK-YALTVCHVCKGSNAEKVMKVVD 637
Query: 400 KMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
+M G N V Y II + + G A ++ ++ R ++T
Sbjct: 638 EMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMT 681
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 187/418 (44%), Gaps = 23/418 (5%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N F L + H+ A L + MD + P F ILI + + + V +
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
K G++P V +Y+ I+D+L K+ + A +Y + + +
Sbjct: 221 KFGFKPR------------------VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE 262
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
T+ L+ G C G+++E + +L +M PDV+ ++ ++ L EG + + V
Sbjct: 263 STTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWD 322
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
M + KPDV+ Y +L+ G C V + ++F M ++ D + Y ++I G
Sbjct: 323 EMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADG 382
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
V A NL++ + ++ Y+++I GLC ++ A++L L P+ T S
Sbjct: 383 KVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLS 442
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ--EVFQDLL 367
++ A + + + ++++++ G + Y T LC K+A +VF L
Sbjct: 443 PIMVAYVVMNRLSDFSNVLERIGELGYPVSDYL-TQFFKLLC-ADEEKNAMALDVFYILK 500
Query: 368 IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
KG+ V Y I++ L K G ++L+L +M G P++ +Y I I +KGD
Sbjct: 501 TKGHG-SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%)
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
K D ++ L + G + A + +M G P + L+ + +
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
++ M + P V Y+ +++ L K D AL +++ + + T+ L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
GLCK+GRI + E++ M P+V Y++++ L ++D ++ + +M+ I P
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
+V Y L+ GLCK GR++ E+F ++ K +D Y ++I G DG A L
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 399 SKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ D+G + Y +I L DKA KL + I L
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 261 MHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH 320
M ++ P+ + LI + R + + +M G P V Y+ ++DAL KN +
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 321 VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI 380
D A+++ + K G++ T+ IL+ GLCK GR+++ E+ Q + DV YT
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
MI L +G D +L + +M + P+ + Y ++ L + G ++ +L +M +
Sbjct: 304 MIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQ 363
Query: 441 LL 442
+L
Sbjct: 364 IL 365
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 4/251 (1%)
Query: 195 GEKPDVVTYSSLMDGYCLVN--EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
G K D Y++ YCL A+ + M P + + I+I +
Sbjct: 153 GYKHDFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
++++M P V Y+ ++D L K+G A + + GL T+ L+
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 372
LCK ++ + ++++M+ P+V+ YT ++ L G L + V+ ++
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 373 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKL 432
DV Y ++ GLCKDG + L +M+ + Y ++I G A L
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 433 LRQMIARGLLT 443
++ G +
Sbjct: 391 WEDLVDSGYIA 401
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 189/436 (43%), Gaps = 63/436 (14%)
Query: 35 FRRVMP-DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQP 93
FRR+ D+ +N ++ YC G+ A ++ + K G P +T+N +I +L +
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D M +L +M I+ DV T+T +ISG G +A+ +
Sbjct: 299 DAAM------------------DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+M L + P+ T V A + + V ++ +K G DV+ +SL+D Y
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
++ A +F+++ DV +++ MI G C+ A LF +M N+ PN++T+
Sbjct: 401 GKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW 456
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRG-LPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
+++I G K+G +A +L M G + N T++ ++ +N D A+ L +KM+
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 333 HQGILPNVYTYTILL-----------------------------------DGLCKGGRLK 357
+PN T LL D K G ++
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
++ +F + K D+ T+ +I G G + ALAL ++M+ G TPN T II
Sbjct: 577 YSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Query: 418 YALFQKGDNDKAEKLL 433
A G+ D+ +K+
Sbjct: 633 LAHGLMGNVDEGKKVF 648
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 196/436 (44%), Gaps = 57/436 (13%)
Query: 53 CHLGQITSAFSVLCNIFKRGYQ---------------PDTITFNTIIKIQ-GKLAQPDVV 96
C G + A L ++F++G + +I I+ + G +PDV
Sbjct: 57 CRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVF 116
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
+ + ++ K + DA ++ M + ++ T++ +I + + +E L M
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAK-------------------NVLAVMIKGGE- 196
+ + PD + F ++ G V+ K ++LAV K GE
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 197 -----------KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
+ DV+ ++S++ YC + +A ++ M + ++P + +++I+I G
Sbjct: 233 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
++ D A++L ++M T IT +V T++++I GL +G A ++ +M G+ PN
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMK-HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
+T S + A C V N S + + G + +V L+D K G+L+DA++VF
Sbjct: 353 VTIMSAVSA-CSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+ N DV T+ MI G C+ G +A L ++M+D PN +T+ +I + G
Sbjct: 412 SV----KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 425 DNDKAEKLLRQMIARG 440
D +A L ++M G
Sbjct: 468 DEGEAMDLFQRMEKDG 483
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 166/343 (48%), Gaps = 18/343 (5%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGK-------- 89
V+PD F F ++ + G + + + + K G N+I+ + K
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 90 -----LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
+ + DV+ +++++ + C++ +A L EM + ISP +VT+ LI G+ +G
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
+ A+ L+ +M I DV+T++ ++ L G +A ++ M G P+ VT
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
S + + +N+ ++ + +M DV + +++ K ++DA +F + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
+V T++S+I G C++G A+EL M L PN+IT+++++ KN A
Sbjct: 417 ----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 325 ISLIKKMKHQG-ILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
+ L ++M+ G + N T+ +++ G + G+ +A E+F+ +
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 182/397 (45%), Gaps = 27/397 (6%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
+LFT++ +I Y + + + K G PD F I+ QG DV
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKIL--QGCANCGDVEAGKV 202
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
I +S ++ +S + ++++ + G+L A +M +
Sbjct: 203 I----------------HSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER- 245
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
DV ++ ++ A C+ GK +EA ++ M K G P +VT++ L+ GY + + + A
Sbjct: 246 ---DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAM 302
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
D+ M + DV +++ MI+GL M AL++F++M + PN VT S +
Sbjct: 303 DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
I+ E+ + G +V+ +SL+D K +++A + +K++ +V
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DV 418
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
YT+ ++ G C+ G A E+F + ++ T+ MI+G K+G EA+ L +
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 401 MEDNG-CTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
ME +G N T+ +II Q G D+A +L R+M
Sbjct: 479 MEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 205/481 (42%), Gaps = 73/481 (15%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
+I +N + + + A+ L ++M+ + P L T+NILI Y LG+ +A ++
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 67 NIFKRGYQPDTITFNTIIK---IQGKLAQ--------------PDVVMYSTIIDSLCKDK 109
+ G D T+ +I G Q P+ V + + + K
Sbjct: 307 KMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK 366
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI-NPDVYTF 168
++N ++S + DV+ +L+ + G+L++A + V S+ N DVYT+
Sbjct: 367 VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA-----RKVFDSVKNKDVYTW 421
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
+ ++ C+ G +A + M +P+++T+++++ GY + +A D+F M +
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 229 -MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI---------- 277
++ + +++++I G + D+AL LF++M PN VT SL+
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK 541
Query: 278 -------------------------DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
D KSG I + + M ++ ++IT++SL+
Sbjct: 542 MVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLI 597
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYT--ILLDGLCKGGRLKDAQEVFQDLLIKG 370
+ A++L +MK QGI PN T + IL GL G + + ++VF +
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM--GNVDEGKKVFYS-IAND 654
Query: 371 YNL--DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
Y++ + + M+ + +EAL + +M TP +E + GD D
Sbjct: 655 YHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP---IWESFLTGCRIHGDIDM 711
Query: 429 A 429
A
Sbjct: 712 A 712
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 131/303 (43%), Gaps = 9/303 (2%)
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
C G L EA L+ + + T+ L+++ G + + +L +PD
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGR-ILHARFGLFTEPD 114
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
V + L+ Y + A +F++M L ++S MI + + LF+
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENRWREVAKLFR 170
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
M + + P+ + ++ G G + + + + G+ + +S+L K
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
+D A ++M+ + +V + +L C+ G+ ++A E+ +++ +G + + T+
Sbjct: 231 ELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
I+I G + G D A+ LM KME G T + T+ +I L G +A + R+M
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 440 GLL 442
G++
Sbjct: 347 GVV 349
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 9/277 (3%)
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
D LC+ G + EA+ L + + G K TY L++ C+ + I + +
Sbjct: 54 DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLES-CIDSGSIHLGRILHARFGLFTE 112
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
PDV + +++ K + DA +F M N+ T+S++I + R + +L
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWREVAKL 168
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
M G+ P+ + +L V+ + + G+ + +L K
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
G L A + F+ + + DV + ++ C++G +EA+ L+ +ME G +P VT
Sbjct: 229 CGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
+ I+I Q G D A L+++M G+ +F T
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 120/291 (41%), Gaps = 30/291 (10%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFR-RVMPDLFTFNILINCYCHLGQITSAFS 63
P II +N + +K A+ L Q+M+ +V + T+N++I Y G+ A
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 64 VLCNIFKRGYQPDTITFNTII-------------KIQGKLAQPDV----VMYSTIIDSLC 106
+ + + P+++T +++ +I G + + ++ + + + D+
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K + + ++ M K D++T+ +LI G+ + G A+ L NQM + I P+
Sbjct: 571 KSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRG 626
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
T S ++ A G V E K V + + + S M L N+ E+ +
Sbjct: 627 TLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAM--VYLYGRANRLEEALQFI 684
Query: 227 TRMELAPDVQSYSIMINGLCKIK-----MVDDALNLFKQMHTENITPNVVT 272
M + + + + G C+I + A NLF T ++V+
Sbjct: 685 QEMNIQSETPIWESFLTG-CRIHGDIDMAIHAAENLFSLEPENTATESIVS 734
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 188/420 (44%), Gaps = 29/420 (6%)
Query: 29 LSQQMDFRRVMPDL------FTFNILINCYCHLG-QITSAFSVLCNIFKR-GYQPDTITF 80
LS D+ R L FT +++ H Q + + KR GY+ ++ +
Sbjct: 622 LSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAY 681
Query: 81 NTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF 140
N IK+ G C K +L+ EM + T+ +I +
Sbjct: 682 NMSIKVAG-----------------C-GKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQY 723
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALC-KEGK-VKEAKNVLAVMIKGGEKP 198
G A+ +M + P TF L+ LC K+G+ V+EA MI+ G P
Sbjct: 724 GRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVP 783
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
D + C V A+ +++ ++ P +YSI I LC+I +++AL+
Sbjct: 784 DRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSEL 842
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
E + TY S++ GL + G + A + VN M G P V Y+SL+ K
Sbjct: 843 ASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKE 902
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
++ + +KM+ + P+V TYT ++ G G++++A F+++ +G + D +TY
Sbjct: 903 KQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTY 962
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
+ IN LC+ ++AL L+S+M D G P+ + + + Y L ++G +D A L++ A
Sbjct: 963 SKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSA 1022
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 157/331 (47%), Gaps = 18/331 (5%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM--- 97
D+ T+ ILI+ Y +I V + K G++ D +N +I+ + D+ +
Sbjct: 223 DIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFY 282
Query: 98 --------------YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV 143
Y ++D + K + V+ ++ +M+ + + L+ FC+
Sbjct: 283 KEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVS 342
Query: 144 GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
G++KEA+ L+ ++ K + D F ILV LC+ ++ +A ++ +M K + D Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM-KRRKLDDSNVY 401
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
++ GY N+V+KA + F + + P V +Y+ ++ L K+K + NLF +M
Sbjct: 402 GIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIE 461
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
I P+ V ++++ G R+++AW++ + M +G+ P +YS + LC++ D
Sbjct: 462 NGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
I + +M I+ ++ ++ + K G
Sbjct: 522 IIKIFNQMHASKIVIRDDIFSWVISSMEKNG 552
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 165/376 (43%), Gaps = 18/376 (4%)
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVV-----------------MYSTIIDSLCKDKLVN 112
K G+ +NT++ I G+ D+V ++ +I K K +
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
++ +M D Y +I CI G+ A+ +M+ K I + T+ +L+
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
D + K KV +++ M++ E + + L+ +C+ ++ +A ++ + E+
Sbjct: 302 DCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMC 361
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
D + + I++ GLC+ + DAL + M + + V Y +I G + +S A E
Sbjct: 362 LDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQ 420
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
+ G PP V TY+ ++ L K + +L +M GI P+ T ++ G
Sbjct: 421 FEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLG 480
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
R+ +A +VF + KG ++Y+I + LC+ +DE + + ++M +
Sbjct: 481 QNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDI 540
Query: 413 YEIIIYALFQKGDNDK 428
+ +I ++ + G+ +K
Sbjct: 541 FSWVISSMEKNGEKEK 556
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 191/419 (45%), Gaps = 12/419 (2%)
Query: 29 LSQQMDFRRVMPDLFTF----NILINCYCHLGQITSAFS--VLCNIFKRGYQPDTIT--- 79
L +++DF V+ ++ + ++L++ L +++ F ++ N+ KR ++ +
Sbjct: 116 LHEEVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRF 175
Query: 80 FNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG 139
FN + + G V +Y+T++ + + ++ L SEM D+ T+T LIS
Sbjct: 176 FNWVKQKDG--FSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISV 233
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
+ ++ + + + +M D ++I++ +LC G+ A M++ G
Sbjct: 234 YGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFG 293
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
+ TY L+D +V+ + I + M R+ + ++ ++ C + +AL L +
Sbjct: 294 LRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIR 353
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
++ + + + + L+ GLC++ R+ DA E+V+ M R L + + Y ++ + +
Sbjct: 354 ELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQN 412
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
V A+ + +K G P V TYT ++ L K + + +F +++ G D T
Sbjct: 413 DVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAIT 472
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
++ G EA + S ME+ G P +Y I + L + D+ K+ QM A
Sbjct: 473 AVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHA 531
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 183 EAKNV------LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 236
EA+N+ ++ M K G D+ T++ L+ Y ++ K +F M + D
Sbjct: 201 EARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDAT 260
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+Y+IMI LC D AL +K+M + IT + TY L+D + KS ++ + ++M
Sbjct: 261 AYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
+ LL + C + + A+ LI+++K++ + + + IL+ GLC+ R+
Sbjct: 321 VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 357 KDAQEVFQ-------------DLLIKGYNLD---------------------VRTYTIMI 382
DA E+ ++I GY V TYT ++
Sbjct: 381 VDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIM 440
Query: 383 NGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
L K F++ L ++M +NG P++V ++ + +A K+ M +G+
Sbjct: 441 QHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 184/474 (38%), Gaps = 64/474 (13%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
F S + A+ L +++ + + D F IL+ C ++ A ++ +I
Sbjct: 332 FGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIM 390
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
KR D+ + II G L Q DV + A + + P
Sbjct: 391 KRRKLDDSNVYGIII--SGYLRQNDV----------------SKALEQFEVIKKSGRPPR 432
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
V TYT ++ + Q ++ L N+M+ I PD + +V + +V EA V +
Sbjct: 433 VSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFS 492
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM----------------------- 226
M + G KP +YS + C + ++ IFN M
Sbjct: 493 SMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNG 552
Query: 227 --TRMELAPDVQ----SYSIMINGLCKIK------MVDDALNLFKQMHTENITPNVVTYS 274
++ L ++Q SY +NG K + +VDD N + + + P +
Sbjct: 553 EKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDD-YNCPQLVQQSALPPALSAVD 611
Query: 275 SL-IDGLCKSGRISDAWELVNEMHSRG---LPPNVITYSSLLDALCKNHHVDNAISLIKK 330
+ + +C+ S WE E + P ++ L A + + V S + K
Sbjct: 612 KMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVV-EVLRHAKIQGNAVLRFFSWVGK 670
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
Y +I + G G K + +F ++ +G + T+ IMI + GL
Sbjct: 671 RNGYKHNSEAYNMSIKVAGC--GKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGL 728
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQ-KGDN-DKAEKLLRQMIARGLL 442
+ A+ +M+D G P++ T++ +I L + KG N ++A + R+MI G +
Sbjct: 729 TNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFV 782
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 14 FTSLV----KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+TSL+ K K + Q+M+ P + T+ +I Y LG++ A++ N+
Sbjct: 892 YTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+RG PD F T YS I+ LC+ DA L SEML K I+P
Sbjct: 952 ERGTSPD---FKT---------------YSKFINCLCQACKSEDALKLLSEMLDKGIAPS 993
Query: 130 VVTYTTLISGF 140
+ + T+ G
Sbjct: 994 TINFRTVFYGL 1004
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 154/311 (49%), Gaps = 6/311 (1%)
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
Y L+ F G+ K L+++M+ TF++L+ C G+ A++V+ I
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 193 KGGE---KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIK 249
K +P +Y++++ V + + ++ M PDV +Y+I++ ++
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 250 MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS 309
D L +M + +P++ TY+ L+ L + A L+N M G+ P VI ++
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+L+D L + ++ + + G P+V YT+++ G GG L+ A+E+F+++ K
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
G +V TY MI G C G F EA AL+ +ME GC PN V Y ++ L G +A
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEA 451
Query: 430 EKLLRQMIARG 440
++++ M+ +G
Sbjct: 452 HEVVKDMVEKG 462
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 156/330 (47%), Gaps = 20/330 (6%)
Query: 23 YATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNT 82
Y + Q +FR +++L+ + G+ + ++ + K GY TFN
Sbjct: 136 YKFFVWCGGQENFRHTAN---CYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNL 192
Query: 83 IIKIQGKLA-----------------QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR 125
+I G+ +P Y+ I+ SL K +Y +ML
Sbjct: 193 LICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDG 252
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
+PDV+TY ++ +G+ LL++MV +PD+YT++IL+ L K A
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
N+L M + G +P V+ +++L+DG ++ + + ++ PDV Y++MI G
Sbjct: 313 NLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGY 372
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
++ A +FK+M + PNV TY+S+I G C +G+ +A L+ EM SRG PN
Sbjct: 373 ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNF 432
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
+ YS+L++ L V A ++K M +G
Sbjct: 433 VVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 145/292 (49%), Gaps = 6/292 (2%)
Query: 117 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL-KSIN--PDVYTFSILVD 173
L EM+ T+ LI C G+ A ++ Q + K+ N P ++++ ++
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 174 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
+L + K V M++ G PDV+TY+ +M + + ++ + + M + +P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
D+ +Y+I+++ L ALNL M + P V+ +++LIDGL ++G++ +
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
+E G P+V+ Y+ ++ ++ A + K+M +G LPNV+TY ++ G C
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
G+ K+A + +++ +G N + Y+ ++N L G EA ++ M + G
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 18/257 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +N SL+ K Y + +QM PD+ T+NI++ LG+ + +
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L + K G+ PD T+N ++ +P A NL + M
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLA------------------ALNLLNHMREV 321
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ P V+ +TTLI G G+L+ +++ V PDV +++++ G++++A
Sbjct: 322 GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ + M + G+ P+V TY+S++ G+C+ + +A + M P+ YS ++N
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 245 LCKIKMVDDALNLFKQM 261
L V +A + K M
Sbjct: 442 LKNAGKVLEAHEVVKDM 458
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL--CKSGRISDAWELVN 294
+++++I + + D + F + T N P +Y++++ L K ++ D W +
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLID-W-VYE 246
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
+M G P+V+TY+ ++ A + D L+ +M G P++YTY ILL L G
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 355 RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYE 414
+ A + + G V +T +I+GL + G + M + GCTP+ V Y
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 415 IIIYALFQKGDNDKAEKLLRQMIARGLLTGLF 446
++I G+ +KAE++ ++M +G L +F
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 2/198 (1%)
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
EN Y L+ + G L++EM G P T++ L+ + +
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARD 205
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
+ K K P ++Y +L L + K V++ +L G+ DV TY I++
Sbjct: 206 VVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMF 265
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
+ G D L+ +M +G +P+ TY I+++ L A LL M G+
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEP 325
Query: 444 GLFYATEFEAVEELSAPG 461
G+ + T ++ LS G
Sbjct: 326 GVIHFTTL--IDGLSRAG 341
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 165/361 (45%), Gaps = 9/361 (2%)
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
L + D + +I L + +N A + +M K + D + LI + G ++E+
Sbjct: 145 LIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQES 204
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
V + +M + + +++ L + + G+ AK M+ G +P TY+ ++ G
Sbjct: 205 VKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWG 264
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+ L + A F M ++PD +++ MING C+ K +D+A LF +M I P+
Sbjct: 265 FFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPS 324
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
VV+Y+++I G R+ D + EM S G+ PN TYS+LL LC + A +++K
Sbjct: 325 VVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILK 384
Query: 330 KMKHQGILPNVYT-YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
M + I P + + LL K G + A EV + + + Y ++I CK
Sbjct: 385 NMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKA 444
Query: 389 GLFDEALALMSKM--------EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
++ A+ L+ + + Y II L G KAE L RQ++ RG
Sbjct: 445 SAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Query: 441 L 441
+
Sbjct: 505 V 505
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 199/463 (42%), Gaps = 32/463 (6%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I +N F +++ Y A +M V P T+N+++ + ++ +A
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 67 NIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDK 109
++ RG PD TFNT+I +++G P VV Y+T+I
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP-DVYTF 168
V+D ++ EM + I P+ TY+TL+ G C G++ EA +L M+ K I P D F
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
L+ + K G + A VL M + Y L++ C + N+A + +T+
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIE 459
Query: 229 ME--------LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
E L + +Y+ +I LC A LF+Q+ + + ++LI G
Sbjct: 460 KEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGH 518
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
K G ++E++ M RG+P Y L+ + +A + + M G +P+
Sbjct: 519 AKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDS 578
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI--MINGLCKDGLFDEALALM 398
+ +++ L + GR++ A V ++ K ++ I ++ L G +EAL +
Sbjct: 579 SLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRI 638
Query: 399 SKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ NG T + + ++ L +KG A KLL + R L
Sbjct: 639 DLLNQNGHTAD---LDSLLSVLSEKGKTIAALKLLDFGLERDL 678
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 187/492 (38%), Gaps = 109/492 (22%)
Query: 13 FFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRG 72
FF SL TA+ + M R + PD TFN +IN +C ++ A + +
Sbjct: 265 FFLSL----RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNK 320
Query: 73 YQPDTITFNTIIKIQGKLA-------------------QPDVVMYSTIIDSLCKDKLVND 113
P +++ T+IK G LA +P+ YST++ LC + +
Sbjct: 321 IGPSVVSYTTMIK--GYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVE 378
Query: 114 AYNLYSEMLAKRISP------------------------------------DVVTYTTLI 137
A N+ M+AK I+P + Y LI
Sbjct: 379 AKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLI 438
Query: 138 SGFCIVGQLKEAVGLLNQMVLKSI----------NPDVYTFSILVDALCKEGKVKEAKNV 187
C A+ LL+ ++ K I P Y + +++ LC G+ +A+ +
Sbjct: 439 ENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY--NPIIEYLCNNGQTAKAEVL 496
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
++K G + D ++L+ G+ + + +I M+R + + +Y ++I
Sbjct: 497 FRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMS 555
Query: 248 IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR--GLPPNV 305
DA M + P+ + S+I+ L + GR+ A ++ M + G+ N+
Sbjct: 556 KGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNM 615
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV------------------------- 340
+ +L+AL HV+ A+ I + G ++
Sbjct: 616 DLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFGLE 675
Query: 341 -------YTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE 393
+Y +LD L G+ +A V ++ KG + D ++ +I L ++G +
Sbjct: 676 RDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQ 735
Query: 394 ALALMSKMEDNG 405
A ++S+M G
Sbjct: 736 A-DVLSRMIKKG 746
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 143/293 (48%), Gaps = 17/293 (5%)
Query: 72 GYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVNDA 114
G++ D T+ T++ G+ Q P+ V Y+ +I S + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
N++++M PD VTY TLI G L A+ + +M ++PD +T+S++++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 175 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPD 234
L K G + A + M+ G P++VT++ ++ + A ++ M PD
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 235 VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
+YSI++ L +++A +F +M +N P+ Y L+D K+G + AW+
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILL 347
M GL PNV T +SLL + H + A +L++ M G+ P++ TYT+LL
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 147/282 (52%)
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D +T++ +V L + + E +L M++ G KP+ VTY+ L+ Y N + +A ++F
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
N M PD +Y +I+ K +D A++++++M ++P+ TYS +I+ L K+
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
G + A L EM +G PN++T++ ++ K + + A+ L + M++ G P+ TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
+I+++ L G L++A+ VF ++ K + D Y ++++ K G D+A M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
G PN T ++ + +A LL+ M+A GL L
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSL 639
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 169/366 (46%), Gaps = 9/366 (2%)
Query: 52 YCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLV 111
+C+ G + S + FK G+ + N ++ D + ++ + D
Sbjct: 290 HCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRM-------DAYQANQVLKQM--DNYA 340
Query: 112 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
N Y D TYTT++ Q E LL++MV P+ T++ L
Sbjct: 341 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRL 400
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
+ + + +KEA NV M + G +PD VTY +L+D + ++ A D++ M L
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
+PD +YS++IN L K + A LF +M + TPN+VT++ +I K+ A +
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
L +M + G P+ +TYS +++ L ++ A + +M+ + +P+ Y +L+D
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 352 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
K G + A + +Q +L G +V T +++ + EA L+ M G P+
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 412 TYEIII 417
TY +++
Sbjct: 641 TYTLLL 646
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 140/295 (47%), Gaps = 1/295 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D Y+T++ +L + K + L EM+ P+ VTY LI + LKEA+ +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
NQM PD T+ L+D K G + A ++ M + G PD TYS +++
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+ A +F M P++ +++IMI K + + AL L++ M P+ VTY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
S +++ L G + +A + EM + P+ Y L+D K +VD A + M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 334 QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
G+ PNV T LL + R+ +A + Q +L G + ++TYT++++ C D
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCTD 651
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%)
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G K D TY++++ + + + + M R P+ +Y+ +I+ + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+N+F QM P+ VTY +LID K+G + A ++ M GL P+ TYS +++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
L K H+ A L +M QG PN+ T+ I++ K + A ++++D+ G+ D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
TY+I++ L G +EA + ++M+ P+ Y +++ + G+ DKA + +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 435 QMIARGL 441
M+ GL
Sbjct: 594 AMLQAGL 600
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 56/306 (18%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+ + Q+M + PD FT++++INC G + +A + C + +G P+ +TFN +I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 86 IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
+ K Y T A LY +M PD VTY+ ++ G
Sbjct: 508 LHAKARN-----YET-------------ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
L+EA G+ +M K+ PD + +LVD K G V +A M++ G +P+V T +S
Sbjct: 550 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN-----------GLC-------- 246
L+ + V+ +++A ++ +M + L P +Q+Y+++++ G C
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSG 669
Query: 247 ----------------KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA- 289
K+ D N MH+E+ +++D L KSG +A
Sbjct: 670 HPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAG 729
Query: 290 --WELV 293
WE+
Sbjct: 730 SVWEVA 735
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP ++ L K H A L +M + P+L TFNI+I + +A
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 64 VLCNIFKRGYQPDTITFNTIIKI----------QGKLAQ-------PDVVMYSTIIDSLC 106
+ ++ G+QPD +T++ ++++ +G A+ PD +Y ++D
Sbjct: 521 LYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K V+ A+ Y ML + P+V T +L+S F V ++ EA LL M+ ++P +
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 167 TFSILVDALCKEGK 180
T+++L+ + C + +
Sbjct: 641 TYTLLL-SCCTDAR 653
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 183/407 (44%), Gaps = 22/407 (5%)
Query: 61 AFSVLCNIFKR-GYQPDTITFNTIIKIQGKLAQPDVVM----------------YSTIID 103
AF C +R G+ + T+N+++ I K Q + ++ ++ +
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMK 237
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
+ K A ++ M + V T L+ KEA L +++ + P
Sbjct: 238 AFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTP 296
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
++ T+++L++ C+ + EA + MI G KPD+V ++ +++G + + A +F
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
+ M P+V+SY+IMI CK ++ A+ F M + P+ Y+ LI G
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
++ +EL+ EM +G PP+ TY++L+ + ++ + KM I P+++T+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 476
Query: 344 TILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
+++ + + V+ +++ KG D +YT++I GL +G EA + +M D
Sbjct: 477 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLD 536
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYATE 450
G + Y A F +G ++ ++ R +G F A E
Sbjct: 537 KGMKTPLIDYNKFA-ADFHRGGQP---EIFEELAQRAKFSGKFAAAE 579
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 132/299 (44%), Gaps = 18/299 (6%)
Query: 37 RVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVV 96
R P++ T+ +L+N +C + + A + ++ G +PD + N V
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN--------------V 338
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
M ++ S+ K +DA L+ M +K P+V +YT +I FC ++ A+ + M
Sbjct: 339 MLEGLLRSMKK----SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
V + PD ++ L+ + K+ +L M + G PD TY++L+
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
I+N M + E+ P + ++++++ + + ++ +M + I P+ +Y+ L
Sbjct: 455 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
I GL G+ +A + EM +G+ +I Y+ + + L ++ K G
Sbjct: 515 IRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 112/269 (41%), Gaps = 20/269 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ N L+++ + AI L M + P++ ++ I+I +C + +A
Sbjct: 331 PDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEY 390
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
++ G QPD + +I ++Q K PD Y+ +I +
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 450
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
K+ +Y++M+ I P + T+ ++ + + + + ++M+ K I PD +
Sbjct: 451 QKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNS 510
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+++L+ L EGK +EA L M+ G K ++ Y+ + + E++
Sbjct: 511 YTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
Query: 228 ---RMELAPDVQSYSIMINGLCKIKMVDD 253
+ A ++ M CK + ++D
Sbjct: 571 FSGKFAAAEIFARWAQMTRRRCKQRFMED 599
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 193/423 (45%), Gaps = 39/423 (9%)
Query: 11 NKFFTSLVKTKHYAT----AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
+ F S+++T A AISL + + + +F+ L+ ++ +A C
Sbjct: 81 DSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAA----C 136
Query: 67 NIFKR---GYQPDT--ITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+IF++ G++ ++ N ++K+ LC+ + A ++ EM
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKV------------------LCQVNRSDLASQVFQEM 178
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL----KSINPDVYTFSILVDALCK 177
+ PD +Y L+ GFC+ G+L+EA LL M K D+ + IL+DALC
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE--VNKAEDIFNTMTRMELAPDV 235
G+V +A +L +++ G K Y + G+ + + + + + P +
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCL 298
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN- 294
SYS M L + + + + M ++ P Y + + LC++G++ +A ++N
Sbjct: 299 DSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINK 358
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTILLDGLCKG 353
EM P V Y+ L+ LC + A+ +KKM Q + N TY L+DGLC+
Sbjct: 359 EMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRD 418
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G+ +A +V +++LIK + V TY +MI GLC EA+ + +M P + +
Sbjct: 419 GQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVW 478
Query: 414 EII 416
+ +
Sbjct: 479 KAL 481
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 168/356 (47%), Gaps = 13/356 (3%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEML-AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
+ T++ + K+ + A +++ + ++ + L+ C V + A + +M
Sbjct: 119 FDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEM 178
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI----KGGEKPDVVTYSSLMDGYCL 212
+ PD ++ IL+ C EGK++EA ++L M + G D+V Y L+D C
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT----P 268
EV+ A +I + R L + Y + G + + + K++ TE + P
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAG--HWESSSEGIERVKRLLTETLIRGAIP 296
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
+ +YS++ L + G++ + E++ M S+G P Y + + ALC+ + A+S+I
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 329 KKMKHQG-ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMINGLC 386
K QG LP V Y +L+ GLC G+ +A + + + + + TY +++GLC
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC 416
Query: 387 KDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+DG F EA +M +M P TY ++I L +A L +M+++ ++
Sbjct: 417 RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 161/349 (46%), Gaps = 18/349 (5%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I N L + A + Q+M+++ PD ++ IL+ +C G++ A +L
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
++F R I K + D+V+Y ++D+LC V+DA + ++L K +
Sbjct: 212 SMFWR--------------ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Query: 127 SPDVVTYTTLISGFCIVGQ--LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
Y + +G ++ LL + +++ P + ++S + L +EGK+ E
Sbjct: 258 KAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEG 317
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT-MTRMELAPDVQSYSIMIN 243
+ VL M G +P Y + + C ++ +A + N M + P V Y+++I
Sbjct: 318 EEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIK 377
Query: 244 GLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
GLC +A+ K+M + + N TY +L+DGLC+ G+ +A +++ EM +
Sbjct: 378 GLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF 437
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
P V TY ++ LC A+ +++M Q ++P + L + +C
Sbjct: 438 PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 104/216 (48%), Gaps = 9/216 (4%)
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
++ +I + ++DA++LFK +H N +++ +L+ + K + A + + +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK-Y 142
Query: 298 SRGLPPN--VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
G N + + L+ LC+ + D A + ++M +QG P+ +Y IL+ G C G+
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 356 LKDAQEV----FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
L++A + F + KG D+ Y I+++ LC G D+A+ ++ K+ G
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKR 262
Query: 412 TYEIIIYALFQKGDN--DKAEKLLRQMIARGLLTGL 445
Y I ++ ++ ++LL + + RG + L
Sbjct: 263 CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCL 298
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 193/423 (45%), Gaps = 39/423 (9%)
Query: 11 NKFFTSLVKTKHYAT----AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
+ F S+++T A AISL + + + +F+ L+ ++ +A C
Sbjct: 81 DSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAA----C 136
Query: 67 NIFKR---GYQPDT--ITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+IF++ G++ ++ N ++K+ LC+ + A ++ EM
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKV------------------LCQVNRSDLASQVFQEM 178
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL----KSINPDVYTFSILVDALCK 177
+ PD +Y L+ GFC+ G+L+EA LL M K D+ + IL+DALC
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE--VNKAEDIFNTMTRMELAPDV 235
G+V +A +L +++ G K Y + G+ + + + + + P +
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCL 298
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN- 294
SYS M L + + + + M ++ P Y + + LC++G++ +A ++N
Sbjct: 299 DSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINK 358
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTILLDGLCKG 353
EM P V Y+ L+ LC + A+ +KKM Q + N TY L+DGLC+
Sbjct: 359 EMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRD 418
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G+ +A +V +++LIK + V TY +MI GLC EA+ + +M P + +
Sbjct: 419 GQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVW 478
Query: 414 EII 416
+ +
Sbjct: 479 KAL 481
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 168/356 (47%), Gaps = 13/356 (3%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEML-AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
+ T++ + K+ + A +++ + ++ + L+ C V + A + +M
Sbjct: 119 FDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEM 178
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMI----KGGEKPDVVTYSSLMDGYCL 212
+ PD ++ IL+ C EGK++EA ++L M + G D+V Y L+D C
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT----P 268
EV+ A +I + R L + Y + G + + + K++ TE + P
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAG--HWESSSEGIERVKRLLTETLIRGAIP 296
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
+ +YS++ L + G++ + E++ M S+G P Y + + ALC+ + A+S+I
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 329 KKMKHQG-ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMINGLC 386
K QG LP V Y +L+ GLC G+ +A + + + + + TY +++GLC
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC 416
Query: 387 KDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+DG F EA +M +M P TY ++I L +A L +M+++ ++
Sbjct: 417 RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 161/349 (46%), Gaps = 18/349 (5%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I N L + A + Q+M+++ PD ++ IL+ +C G++ A +L
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
++F R I K + D+V+Y ++D+LC V+DA + ++L K +
Sbjct: 212 SMFWR--------------ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGL 257
Query: 127 SPDVVTYTTLISGFCIVGQ--LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
Y + +G ++ LL + +++ P + ++S + L +EGK+ E
Sbjct: 258 KAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEG 317
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT-MTRMELAPDVQSYSIMIN 243
+ VL M G +P Y + + C ++ +A + N M + P V Y+++I
Sbjct: 318 EEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIK 377
Query: 244 GLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
GLC +A+ K+M + + N TY +L+DGLC+ G+ +A +++ EM +
Sbjct: 378 GLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF 437
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
P V TY ++ LC A+ +++M Q ++P + L + +C
Sbjct: 438 PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 104/216 (48%), Gaps = 9/216 (4%)
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
++ +I + ++DA++LFK +H N +++ +L+ + K + A + + +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK-Y 142
Query: 298 SRGLPPN--VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
G N + + L+ LC+ + D A + ++M +QG P+ +Y IL+ G C G+
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 356 LKDAQEV----FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAV 411
L++A + F + KG D+ Y I+++ LC G D+A+ ++ K+ G
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKR 262
Query: 412 TYEIIIYALFQKGDN--DKAEKLLRQMIARGLLTGL 445
Y I ++ ++ ++LL + + RG + L
Sbjct: 263 CYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCL 298
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 182/394 (46%), Gaps = 18/394 (4%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDS 104
F++L+ CY + + F V + G+ IT NT+I K D+V
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLV-------- 218
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
+ +Y + KRI P+ +T +I C G+LKE V LL+++ K P
Sbjct: 219 ----------WRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPS 268
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
V + LV + +E +++E+ ++L ++ D + YS ++ ++ A +F+
Sbjct: 269 VIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFD 328
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
M + + + Y++ + C+ V +A L +M ++P T++ LI G + G
Sbjct: 329 EMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFG 388
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
E M +RGL P+ ++ ++ ++ K +V+ A ++ K +G +P+ +TY+
Sbjct: 389 WEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYS 448
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
L+ G +G + A ++F ++ + + + +I GLC G + + M+
Sbjct: 449 HLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR 508
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
PNA Y+ +I A + GD A+++ +MI+
Sbjct: 509 LIEPNADIYDALIKAFQKIGDKTNADRVYNEMIS 542
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 123/237 (51%)
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
L+ Y + + D+F + V + + +I+ K K+ D +++ +
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKR 229
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
I PN +T +I LCK GR+ + +L++ + + P+VI +SL+ + + ++ ++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
SL+K++ + ++ + Y+I++ K G L A++VF ++L +G++ + YT+ +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
C+ G EA L+S+ME++G +P T+ +I + G +K + M+ RGL+
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 110/269 (40%), Gaps = 45/269 (16%)
Query: 233 PDVQSYSIMINGLCK-------IKMVD----------------------------DALNL 257
P+ + IMI LCK + ++D ++++L
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
K++ +N+ + + YS ++ K G + A ++ +EM RG N Y+ + C+
Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
V A L+ +M+ G+ P T+ L+ G + G + E + ++ +G
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSA 411
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM- 436
+ M+ + K + A +++K D G P+ TY +I + D D+A KL +M
Sbjct: 412 FNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEME 471
Query: 437 ---------IARGLLTGLFYATEFEAVEE 456
+ R L+ GL + EA E+
Sbjct: 472 YRKMSPGFEVFRSLIVGLCTCGKVEAGEK 500
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 27/253 (10%)
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
+++ TR L ++SY++ I+ L K +++ DA L E+ N S L+D L
Sbjct: 102 WSSHTR-NLRHGIKSYALTIHILVKARLLIDARALI-----ESSLLNSPPDSDLVDSLLD 155
Query: 283 SGRISDAWELVNEMHSR---------------------GLPPNVITYSSLLDALCKNHHV 321
+ IS + LV ++ + G +VIT ++L+ K+
Sbjct: 156 TYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKID 215
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
D + + + I PN T I++ LCK GRLK+ ++ + K V T +
Sbjct: 216 DLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSL 275
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ + ++ +E+++L+ ++ + + Y I++YA ++GD A K+ +M+ RG
Sbjct: 276 VFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGF 335
Query: 442 LTGLFYATEFEAV 454
F T F V
Sbjct: 336 SANSFVYTVFVRV 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 70/189 (37%), Gaps = 18/189 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
SP FN + + + M R +MP FN ++ + + A
Sbjct: 371 SPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANE 430
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+L +G+ PD T YS +I + ++ A L+ EM
Sbjct: 431 ILTKSIDKGFVPDEHT------------------YSHLIRGFIEGNDIDQALKLFYEMEY 472
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+++SP + +LI G C G+++ L M + I P+ + L+ A K G
Sbjct: 473 RKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTN 532
Query: 184 AKNVLAVMI 192
A V MI
Sbjct: 533 ADRVYNEMI 541
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 164/327 (50%), Gaps = 24/327 (7%)
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL---KSINPDVYTFSILVDALCK 177
+L K +PD YTTL+ G+ G++ + +L M ++ +PD T++ +V A
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR-MELAPDVQ 236
G + A+ VLA M + G + +TY+ L+ GYC ++++AED+ MT + PDV
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
SY+I+I+G I AL F +M T I P ++Y++L+ SG+ A + +EM
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 297 -HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
+ + ++I ++ L++ C+ +++A ++ +MK G PNV TY L +G+ + +
Sbjct: 585 MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Query: 356 LKDA----QEVFQDLLIKGYNLDVRTYTIMINGLCK--DGLFD-------------EALA 396
DA +E+ + +K + + + K +GL D +AL
Sbjct: 645 PGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALE 704
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQK 423
+++ ME+NG PN Y+ I + +
Sbjct: 705 IIACMEENGIPPNKTKYKKIYVEMHSR 731
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 171/403 (42%), Gaps = 82/403 (20%)
Query: 91 AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV 150
++PD ++ ++++ + + L+ EM PDV+TY +I VG+ + V
Sbjct: 232 SRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIV 291
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV---------- 200
+L +++ K I + T LV A G ++ A+ ++ M + ++ D+
Sbjct: 292 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMRE--KRRDLCKVLRECNAE 349
Query: 201 ---------------VTYSSLMDGYCLVNEVNKAE--DIFNTMTRMEL------------ 231
GY +EV++ D+F + +
Sbjct: 350 DLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKV 409
Query: 232 -APDVQSYSIMINGLCKIKMVDDALNLFKQMHTE---NITPNVVTYSSLIDGLCKSGRIS 287
APD + Y+ ++ G K V D + + M + N P+ VTY++++ +G +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQGILPNVYTYTIL 346
A +++ EM G+P N ITY+ LL CK +D A L+++M + GI P+V +Y I+
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 347 LDG-----------------------------------LCKGGRLKDAQEVFQDLLIKGY 371
+DG G+ K A VF +++
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 372 -NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
+D+ + +++ G C+ GL ++A ++S+M++NG PN TY
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 31 QQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKL 90
++ D R PD T+ +++ + + G + A VL + + G + IT+N ++K
Sbjct: 441 RRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLK----- 495
Query: 91 AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEA 149
CK ++ A +L EM I PDVV+Y +I G ++ A
Sbjct: 496 -------------GYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGA 542
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMD 208
+ N+M + I P +++ L+ A G+ K A V M+ K D++ ++ L++
Sbjct: 543 LAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVE 602
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH------ 262
GYC + + A+ + + M P+V +Y + NG+ + + DAL L+K++
Sbjct: 603 GYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVK 662
Query: 263 ---------TENITPNVVTYSSLIDGLC----KSGRISDAWELVNEMHSRGLPPNVITYS 309
++ P + L+D L ++ A E++ M G+PPN Y
Sbjct: 663 KKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYK 722
Query: 310 SL 311
+
Sbjct: 723 KI 724
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 177/445 (39%), Gaps = 59/445 (13%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII---KIQGKLAQPDVVM 97
D + +L GQ A SV+ ++ + GY P + + G + +
Sbjct: 152 DANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIK 211
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
I K + L + PD + +++ +G + L +M
Sbjct: 212 LFIAITRRVK--------RFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMS 263
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
PDV T+++++ + G+ + VL +I G K + T SL+ Y ++
Sbjct: 264 EWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLR 323
Query: 218 KAEDIFNTM--TRMELAPDVQS---------------------YSIMINGLCKIKMVDD- 253
AE I M R +L ++ +G V +
Sbjct: 324 TAERIVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEE 383
Query: 254 -ALNLFKQMHTENI-------------TPNVVTYSSLIDGLCKSGRISDAWELVNEMHS- 298
+++FK++ ++ P+ Y++L+ G K+GR++D ++ M
Sbjct: 384 GVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQ 443
Query: 299 --RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
R P+ +TY++++ A +D A ++ +M G+ N TY +LL G CK ++
Sbjct: 444 DDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQI 503
Query: 357 KDAQEVFQDLLI-KGYNLDVRTYTIMINGLCKDGLFDE---ALALMSKMEDNGCTPNAVT 412
A+++ +++ G DV +Y I+I+G L D+ ALA ++M G P ++
Sbjct: 504 DRAEDLLREMTEDAGIEPDVVSYNIIIDGCI---LIDDSAGALAFFNEMRTRGIAPTKIS 560
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMI 437
Y ++ A G A ++ +M+
Sbjct: 561 YTTLMKAFAMSGQPKLANRVFDEMM 585
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 165/328 (50%), Gaps = 5/328 (1%)
Query: 115 YNLYSEMLAKRISPDVV----TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+NL ++LAK S +T LI + ++ + +M+ + P +
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 171 LVDAL-CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
++D L G +++A + G P+ +Y+ LM +CL ++++ A +F M
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
++ PDV SY I+I G C+ V+ A+ L M + P+ ++Y++L++ LC+ ++ +A
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
++L+ M +G P+++ Y++++ C+ +A ++ M G PN +Y L+ G
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
LC G + ++ ++++ KG++ ++ G C G +EA ++ + NG T +
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMI 437
+ T+E++I + + +++K + L +
Sbjct: 400 SDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 129/246 (52%), Gaps = 2/246 (0%)
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
RGY ++ G P+ Y+ ++ + C + ++ AY L+ +ML + + PDV
Sbjct: 168 RGYLQKAFELFKSSRLHG--VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
+Y LI GFC GQ+ A+ LL+ M+ K PD +++ L+++LC++ +++EA +L
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M G PD+V Y++++ G+C + A + + M +P+ SY +I GLC M
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
D+ ++M ++ +P+ + L+ G C G++ +A ++V + G + T+
Sbjct: 346 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Query: 311 LLDALC 316
++ +C
Sbjct: 406 VIPLIC 411
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 137/291 (47%), Gaps = 2/291 (0%)
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDK-LVNDAYNLYSE 120
F+ L ++ P+ + +T K+ P + I+D L + + A+ L+
Sbjct: 122 FTYLIKVYAEAKLPEKV-LSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
+ P+ +Y L+ FC+ L A L +M+ + + PDV ++ IL+ C++G+
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
V A +L M+ G PD ++Y++L++ C ++ +A + M PD+ Y+
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
MI G C+ DA + M + +PN V+Y +LI GLC G + + + EM S+G
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
P+ + L+ C V+ A +++ + G + T+ +++ +C
Sbjct: 361 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 19/279 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHY-ATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
+P N+ LV + Y A L + VMP+ ++N+L+ +C +
Sbjct: 151 TPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC----LNDDL 206
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
S+ +F + + D + PDV Y +I C+ VN A L +ML
Sbjct: 207 SIAYQLFGKMLERDVV--------------PDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
K PD ++YTTL++ C QL+EA LL +M LK NPD+ ++ ++ C+E +
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
+A+ VL M+ G P+ V+Y +L+ G C ++ + M +P + ++
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
G C V++A ++ + + T + T+ +I +C
Sbjct: 373 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P +N + + A L +M R V+PD+ ++ ILI +C GQ+ A +
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMEL 247
Query: 65 LCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCK 107
L ++ +G+ PD +++ T++ +++ K PD+V Y+T+I C+
Sbjct: 248 LDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCR 307
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ DA + +ML+ SP+ V+Y TLI G C G E L +M+ K +P
Sbjct: 308 EDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 367
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+ LV C GKV+EA +V+ V++K GE T+ ++ C +E K +
Sbjct: 368 SNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 427
Query: 228 RMELAPDVQ 236
+ E+ D +
Sbjct: 428 KEEITGDTR 436
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 1/204 (0%)
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL-CKSGRISDAWELVNEM 296
++ +I + K+ + L+ F +M N TP + ++D L G + A+EL
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
G+ PN +Y+ L+ A C N + A L KM + ++P+V +Y IL+ G C+ G++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
A E+ D+L KG+ D +YT ++N LC+ EA L+ +M+ GC P+ V Y +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 417 IYALFQKGDNDKAEKLLRQMIARG 440
I ++ A K+L M++ G
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNG 325
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 160/316 (50%), Gaps = 22/316 (6%)
Query: 35 FRRVMPDLFT---FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK------ 85
F+R++PD F FN L+ C +T A +V ++ K +QPD TFN ++
Sbjct: 170 FKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGWKSSE 228
Query: 86 --------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLI 137
++GK +PDVV Y+++ID CKD+ + AY L +M + +PDV+TYTT+I
Sbjct: 229 EAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVI 288
Query: 138 SGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK 197
G ++GQ +A +L +M PDV ++ + C ++ +A ++ M+K G
Sbjct: 289 GGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 348
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
P+ TY+ L N++ ++ +++ M E P+ QS +I + + VD A+ L
Sbjct: 349 PNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYS--SLLDAL 315
++ M + + L+D LC ++ +A + + EM +G P+ +++ LL L
Sbjct: 409 WEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMEL 468
Query: 316 CKNHHVDNAISLIKKM 331
H D +LI+KM
Sbjct: 469 ANKH--DEVNNLIQKM 482
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 180/387 (46%), Gaps = 27/387 (6%)
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKD-----------------KLVND 113
RG+ + + +T++ I G+ + D + + +I++ KD KL +
Sbjct: 102 RGFYHSSFSLDTMLYILGRNRKFDQI-WELLIETKRKDRSLISPRTMQVVLGRVAKLCSV 160
Query: 114 AYNLYSEMLAKRISPD---VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+ S KR+ PD + L+ C + +A + + + PD+ TF+I
Sbjct: 161 RQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNI 219
Query: 171 LVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L+ K E +KG G KPDVVTY+SL+D YC E+ KA + + M
Sbjct: 220 LLSGW----KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE 275
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
E PDV +Y+ +I GL I D A + K+M P+V Y++ I C + R+ DA
Sbjct: 276 EETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDA 335
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
+LV+EM +GL PN TY+ L + + + L +M LPN + L+
Sbjct: 336 DKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKM 395
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
+ ++ A +++D+++KG+ ++++ LC +EA + +M + G P+
Sbjct: 396 FKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPS 455
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQM 436
V+++ I + +D+ L+++M
Sbjct: 456 NVSFKRIKLLMELANKHDEVNNLIQKM 482
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 4/205 (1%)
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
D ++ ++ LC+ K + DA N++ + + P++ T++ L+ G S
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAF---F 234
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
EM +GL P+V+TY+SL+D CK+ ++ A LI KM+ + P+V TYT ++ GL
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G+ A+EV +++ G DV Y I C +A L+ +M G +PNA TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 414 EIIIYALFQKGDNDKAEKLLRQMIA 438
+ L D ++ +L +M+
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLG 379
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 20/244 (8%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P ++ +N K + A L +M PD+ T+ +I +GQ A V
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREV 303
Query: 65 LCNIFKRGYQPDTITFNTIIK---IQGKLAQPDVVMYSTIIDSLCKD-----------KL 110
L + + G PD +N I+ I +L D ++ + L + L
Sbjct: 304 LKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSL 363
Query: 111 VND---AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
ND ++ LY ML P+ + LI F ++ A+ L MV+K
Sbjct: 364 ANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLV 423
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
+L+D LC KV+EA+ L M++ G +P V++ + L+ NK +++ N +
Sbjct: 424 SDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIK---LLMELANKHDEVNNLIQ 480
Query: 228 RMEL 231
+M +
Sbjct: 481 KMAI 484
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 211/457 (46%), Gaps = 69/457 (15%)
Query: 39 MPD--LFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI--------QG 88
+PD +N L+ Y G+ A + ++ K+G +P +T +T + +G
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 89 KLAQP---------DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI-SPDVVTYTTLIS 138
K + D ++ +++++ CK L+ Y+EM+ R+ DVVT+ +IS
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIE-----YAEMVFDRMFEKDVVTWNLIIS 348
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
G+ G +++A+ + M L+ + D T + L+ A + +K K V I+ +
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES 408
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
D+V S++MD Y + A+ +F++ D+ ++ ++ + + +AL LF
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVE----KDLILWNTLLAAYAESGLSGEALRLF 464
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
M E + PNV+T++ +I L ++G++ +A ++ +M S G+ PN+I+++++++ + +N
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTI--------------------------------- 345
+ AI ++KM+ G+ PN ++ T+
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 346 ---LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
L+D K G + A++VF L L MI+ G EA+AL +E
Sbjct: 585 ETSLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLE 640
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
G P+ +T ++ A GD ++A ++ ++++
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 201/443 (45%), Gaps = 33/443 (7%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A+ +++ + + + ++F++ +I C +G A + + PD + K
Sbjct: 122 ALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCK 181
Query: 86 IQGKLAQPD-----------------VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
G L V + S++ D K +++DA ++ E+ P
Sbjct: 182 ACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI------P 235
Query: 129 D--VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
D V + L+ G+ G+ +EA+ L + M + + P T S + A G V+E K
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
A+ I G + D + +SL++ YC V + AE +F+ M DV +++++I+G
Sbjct: 296 SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYV 351
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
+ +V+DA+ + + M E + + VT ++L+ ++ + E+ +++
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
S+++D K + +A KK+ + ++ + LL + G +A +F +
Sbjct: 412 LASTVMDMYAKCGSIVDA----KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
++G +V T+ ++I L ++G DEA + +M+ +G PN +++ ++ + Q G +
Sbjct: 468 QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCS 527
Query: 427 DKAEKLLRQMIARGLLTGLFYAT 449
++A LR+M GL F T
Sbjct: 528 EEAILFLRKMQESGLRPNAFSIT 550
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 204/503 (40%), Gaps = 76/503 (15%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFR--RVMPDLFTFNILINCYCHLGQITSA 61
SP + +SL K A+SL +MDFR R+ P+++ IL C + +++
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYG-EILQGC-VYERDLSTG 89
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQ------------------GKLAQPDVVMYSTIID 103
+ I K G D N I+ + KL +V ++ II
Sbjct: 90 KQIHARILKNG---DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
C+ L A + EML I PD + + + G+ +V +
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLED 206
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD--VVTYSSLMDGYCLVNEVNKAED 221
V+ S L D K G + +A V E PD V +++LM GY + +A
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVF------DEIPDRNAVAWNALMVGYVQNGKNEEAIR 260
Query: 222 IFNTMTRMELAP--------------------DVQSYSI-MINGL--------------C 246
+F+ M + + P QS++I ++NG+ C
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K+ +++ A +F +M +VVT++ +I G + G + DA + M L + +
Sbjct: 321 KVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCV 376
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
T ++L+ A + ++ + ++ + ++D K G + DA++VF
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
+ K D+ + ++ + GL EAL L M+ G PN +T+ +II +L + G
Sbjct: 437 VEK----DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 427 DKAEKLLRQMIARGLLTGLFYAT 449
D+A+ + QM + G++ L T
Sbjct: 493 DEAKDMFLQMQSSGIIPNLISWT 515
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 166/370 (44%), Gaps = 28/370 (7%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
V DL +N L+ Y G A + + G P+ IT+N II
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIIL------------ 484
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
SL ++ V++A +++ +M + I P+++++TT+++G G +EA+ L +M
Sbjct: 485 ------SLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY-SSLMDGYCLVNEV 216
+ P+ ++ ++ + A + + + +I+ + +V+ +SL+D Y ++
Sbjct: 539 ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDI 598
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
NKAE +F + EL + MI+ + +A+ L++ + + P+ +T +++
Sbjct: 599 NKAEKVFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNV 654
Query: 277 IDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
+ +G I+ A E+ ++ S R + P + Y ++D L + A+ LI++M +
Sbjct: 655 LSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK- 713
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
P+ L+ C R + + L++ + Y + N +G +DE +
Sbjct: 714 --PDARMIQSLVAS-CNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVV 770
Query: 396 ALMSKMEDNG 405
+ M+ G
Sbjct: 771 KMREMMKAKG 780
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 190/403 (47%), Gaps = 16/403 (3%)
Query: 71 RGYQPDTITFNTIIK-IQGKLAQPDVVMYSTIIDSL----CKDKLVNDAYNLYSEMLAKR 125
R ++ I+ +I+ ++ ++ + +++++SL D DAY L+ L K
Sbjct: 162 RVFESPGISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWD--LVKE 219
Query: 126 ISP-------DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKE 178
I ++ LI+ F +G+ K A + ++ P+ T+ + ++ALCK
Sbjct: 220 IGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKR 279
Query: 179 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 238
+ A +V M+K G + +++ +C + +A ++ E + +
Sbjct: 280 SFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV 339
Query: 239 SIMINGLCKIK-MVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
+ +I LCK + A + + E + +S +I LC+ + DA L+ +M
Sbjct: 340 ATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMI 399
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLK 357
S+G P ++ ++ A K +D A ++K M+ +G+ P+VYTYT+++ G KGG +
Sbjct: 400 SKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMD 459
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
+AQE+ + K L TY +I G CK +DEAL L+++M+ G PNA Y +I
Sbjct: 460 EAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 418 YALFQKG-DNDKAEKLLRQMIARGLLTGLFYATEFEAVEELSA 459
+ K D +KAE L +M +GL AV+E+ +
Sbjct: 520 QSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMES 562
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 156/339 (46%), Gaps = 24/339 (7%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
+L N LI + LG+ +AF V + G+ P+ T Y
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKT------------------YYL 271
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL--LNQMVL 158
+++LCK ++ A ++ +ML + + +I+ FC G+ +EA + L +
Sbjct: 272 TLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKE 331
Query: 159 KSINPDVYTFSILVDALCK-EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
KS+ P + L+ ALCK +G + A+ +L + + + +S ++ C + V
Sbjct: 332 KSLPPRF--VATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVK 389
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
A+ + M AP ++++++ K +D+A + K M + + P+V TY+ +I
Sbjct: 390 DAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVII 449
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
G K G + +A E++ E + + +TY +L+ CK D A+ L+ +M G+
Sbjct: 450 SGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQ 509
Query: 338 PNVYTYTILLDGLC-KGGRLKDAQEVFQDLLIKGYNLDV 375
PN Y L+ C K + A+ +F+++ KG +L+
Sbjct: 510 PNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNA 548
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 21/277 (7%)
Query: 16 SLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV--LCNIFKRGY 73
+L K A S+ ++M V+ + +I +C G+ A+SV L ++
Sbjct: 275 ALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSL 334
Query: 74 QP--------------DTITF--NTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNL 117
P TITF + + G+ + + +S +I SLC+ + V DA L
Sbjct: 335 PPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKAL 394
Query: 118 YSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCK 177
+M++K +P + ++ G L EA +L M + + PDVYT+++++ K
Sbjct: 395 LLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAK 454
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQS 237
G + EA+ +LA K +K VTY +L+ GYC + E ++A + N M R + P+
Sbjct: 455 GGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADE 514
Query: 238 YSIMINGLCKIKMVD--DALNLFKQMHTENITPNVVT 272
Y+ +I C +K +D A LF++M + + N ++
Sbjct: 515 YNKLIQSFC-LKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
F+ SL + ++ A +L M + P FN++++ G + A VL +
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
RG +PD T Y+ II K ++++A + +E K
Sbjct: 435 SRGLKPDVYT------------------YTVIISGYAKGGMMDEAQEILAEAKKKHKKLS 476
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALC 176
VTY LI G+C + + EA+ LLN+M + P+ ++ L+ + C
Sbjct: 477 PVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P+P FN + KT A + + M+ R + PD++T+ ++I+ Y G + A
Sbjct: 403 PAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQ 462
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
+L K+ + +T++ +I+ CK + ++A L +EM
Sbjct: 463 EILAEAKKKHKKLSPVTYHALIR------------------GYCKIEEYDEALKLLNEMD 504
Query: 123 AKRISPDVVTYTTLISGFCIVG-QLKEAVGLLNQMVLKSINPDVYTFSIL--VDALCKEG 179
+ P+ Y LI FC+ ++A L +M K ++ + + ++ V + E
Sbjct: 505 RFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEA 564
Query: 180 KVKEAKNVLA 189
KV E N+LA
Sbjct: 565 KVTEDGNLLA 574
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 170/378 (44%), Gaps = 28/378 (7%)
Query: 62 FSVLCNIFKRGYQPDTITFNTIIK--IQGKLAQ------------PDVVMYSTIIDSLCK 107
F LC+ + Y P ++ N + + GK + P+ + + L +
Sbjct: 100 FRWLCSNYD--YTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSE 157
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ LV +A +Y+ + IS VVT +++ G +L L +MV + +
Sbjct: 158 EGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSE--R 215
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
L+ ALC G V E +L +K G P Y+ L+ G+C + ++ +TM
Sbjct: 216 IRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMI 275
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
P + Y +I GLC K +A +FK + + P+ V Y+++I G C+ G +
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL- 346
A +L EM +G+ PN Y+ ++ H ISL++ ++ +L N Y T+L
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHG----HFKRGEISLVEAFYNE-MLRNGYGGTMLS 390
Query: 347 ----LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
+ G C G+ +A E+F+++ G + TY +I G CK+ ++ L L +++
Sbjct: 391 CNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELK 450
Query: 403 DNGCTPNAVTYEIIIYAL 420
G P+ + Y ++ L
Sbjct: 451 ALGLKPSGMAYAALVRNL 468
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 159/362 (43%), Gaps = 18/362 (4%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + N F +L+ K A S F+ P+ + C G + A
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSFLDTTGFK---PEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 64 VLCNIFKRGYQPDTITFNTII-------------KIQGKLAQP--DVVMYSTIIDSLCKD 108
V + G +T N+++ ++ ++ + D +I +LC
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDG 226
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
V++ Y L + L + + P Y LISGFC +G +L+ M+ + P +Y +
Sbjct: 227 GDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIY 286
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
++ LC K EA + + G PD V Y++++ G+C + A ++ M +
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK 346
Query: 229 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
+ P+ +Y++MI+G K + + +M +++ +++I G C G+ +
Sbjct: 347 KGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDE 406
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A+E+ M G+ PN ITY++L+ CK + V+ + L K++K G+ P+ Y L+
Sbjct: 407 AFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR 466
Query: 349 GL 350
L
Sbjct: 467 NL 468
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 18/280 (6%)
Query: 48 LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCK 107
LI C G ++ + +L K+G P +Y+ +I C+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQ------------------YVYAKLISGFCE 260
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ M+A P + Y +I G C+ + EA + + K PD
Sbjct: 261 IGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVV 320
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ ++ C++G + A+ + MIK G +P+ Y+ ++ G+ E++ E +N M
Sbjct: 321 YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEML 380
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
R + S + MI G C D+A +FK M +TPN +TY++LI G CK ++
Sbjct: 381 RNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVE 440
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISL 327
+L E+ + GL P+ + Y++L+ L + V +++L
Sbjct: 441 KGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 173/398 (43%), Gaps = 51/398 (12%)
Query: 14 FTSLVKTKHYATAISLSQQMDFRR-VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRG 72
F L K+ + + + + M +R +PD ++ LI+ GQ A + + G
Sbjct: 104 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSG 163
Query: 73 YQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA-KRISPDVV 131
+PD +N +I + + + K K + +M +R P+VV
Sbjct: 164 CRPDASVYNALI--------------TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVV 209
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
TY L+ F G++ + L + + ++PDVYTF+ ++DA K G +KE + VL M
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
KPD++T++ L+D Y E K E F ++ R + P + +++ MI K +M+
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
D A +FK+M+ N P+ +TY +I G +S A E+ E+ G V+ S+L
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV---GESDRVLKASTL 386
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
NA +L+ C+ G +A ++F +
Sbjct: 387 -----------NA---------------------MLEVYCRNGLYIEADKLFHNASAFRV 414
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
+ D TY + K + ++ LM KME +G PN
Sbjct: 415 HPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 154/323 (47%), Gaps = 11/323 (3%)
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA-LCKEGKVKEAKN 186
PD Y+ LIS GQ + A+ L ++M PD ++ L+ A L K K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 187 VLAVM--IKGGEK--PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
V + +KG E+ P+VVTY+ L+ + +V++ +F + ++PDV +++ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
+ K M+ + + +M + P+++T++ LID K + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT--ILLDGLCKGGRLKDAQ 360
P + T++S++ K +D A + KKM +P+ TY I++ G C G + A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
E+F+++ L T M+ C++GL+ EA L P+A TY+ +Y
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK-FLYKA 427
Query: 421 FQKGD-NDKAEKLLRQMIARGLL 442
+ K D ++ + L+++M G++
Sbjct: 428 YTKADMKEQVQILMKKMEKDGIV 450
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 108/268 (40%), Gaps = 18/268 (6%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P ++ +N + ++ +L + +D V PD++TFN +++ Y G I
Sbjct: 203 RCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM 262
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+VL + +PD ITFN +IDS K + + +
Sbjct: 263 EAVLTRMRSNECKPDIITFN------------------VLIDSYGKKQEFEKMEQTFKSL 304
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ + P + T+ ++I + + +A + +M + P T+ ++ G V
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
A+ + + + T +++++ YC +A+ +F+ + + PD +Y +
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPN 269
K M + L K+M + I PN
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 173/398 (43%), Gaps = 51/398 (12%)
Query: 14 FTSLVKTKHYATAISLSQQMDFRR-VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRG 72
F L K+ + + + + M +R +PD ++ LI+ GQ A + + G
Sbjct: 104 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSG 163
Query: 73 YQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA-KRISPDVV 131
+PD +N +I + + + K K + +M +R P+VV
Sbjct: 164 CRPDASVYNALI--------------TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVV 209
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
TY L+ F G++ + L + + ++PDVYTF+ ++DA K G +KE + VL M
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMV 251
KPD++T++ L+D Y E K E F ++ R + P + +++ MI K +M+
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 252 DDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
D A +FK+M+ N P+ +TY +I G +S A E+ E+ G V+ S+L
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV---GESDRVLKASTL 386
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
NA +L+ C+ G +A ++F +
Sbjct: 387 -----------NA---------------------MLEVYCRNGLYIEADKLFHNASAFRV 414
Query: 372 NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
+ D TY + K + ++ LM KME +G PN
Sbjct: 415 HPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 154/323 (47%), Gaps = 11/323 (3%)
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA-LCKEGKVKEAKN 186
PD Y+ LIS GQ + A+ L ++M PD ++ L+ A L K K +
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 187 VLAVM--IKGGEK--PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
V + +KG E+ P+VVTY+ L+ + +V++ +F + ++PDV +++ ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
+ K M+ + + +M + P+++T++ LID K + +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT--ILLDGLCKGGRLKDAQ 360
P + T++S++ K +D A + KKM +P+ TY I++ G C G + A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
E+F+++ L T M+ C++GL+ EA L P+A TY+ +Y
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK-FLYKA 427
Query: 421 FQKGD-NDKAEKLLRQMIARGLL 442
+ K D ++ + L+++M G++
Sbjct: 428 YTKADMKEQVQILMKKMEKDGIV 450
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 108/268 (40%), Gaps = 18/268 (6%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P ++ +N + ++ +L + +D V PD++TFN +++ Y G I
Sbjct: 203 RCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM 262
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+VL + +PD ITFN +IDS K + + +
Sbjct: 263 EAVLTRMRSNECKPDIITFN------------------VLIDSYGKKQEFEKMEQTFKSL 304
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ + P + T+ ++I + + +A + +M + P T+ ++ G V
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
A+ + + + T +++++ YC +A+ +F+ + + PD +Y +
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPN 269
K M + L K+M + I PN
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 188/406 (46%), Gaps = 45/406 (11%)
Query: 49 INCYCHLGQITSAFSVLCNIFKR--GYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLC 106
+ CY + Q F N +R G++ T TFN +I I GK + ++
Sbjct: 54 LTCYSNDWQKALEF---FNWVERESGFRHTTETFNRVIDILGKYFEFEI----------- 99
Query: 107 KDKLVNDAYNLYSEMLAKRIS-PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN-PD 164
++ L + M+ S P+ VT+ + + ++EA+ ++ L N D
Sbjct: 100 -------SWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDK--LDDFNLRD 150
Query: 165 VYTFSILVDALCKEGKVKEA------KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
+F LVDALC+ V EA KNV+ G + ++ ++ G+ + K
Sbjct: 151 ETSFYNLVDALCEHKHVVEAEELCFGKNVIG---NGFSVSNTKIHNLILRGWSKLGWWGK 207
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
++ + M + D+ SYSI ++ +CK A+ L+K+M + + +VV Y+++I
Sbjct: 208 CKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIR 267
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
+ S + + EM RG PNV T+++++ LC++ + +A ++ +M +G P
Sbjct: 268 AIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQP 327
Query: 339 NVYTYTILLDGLCKGGRLKDAQEV---FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
+ TY +C RL+ E+ F ++ G + TY +++ + G L
Sbjct: 328 DSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVL 381
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ M+++G TP++ Y +I AL QKG D A + +MI RGL
Sbjct: 382 YVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 138/313 (44%), Gaps = 36/313 (11%)
Query: 21 KHYATAISLSQQMDFRRVMPDL-----FTFNILINCYCHLGQITSAFSVLC---NIFKRG 72
K Y TA + + +D + D +F L++ C + A LC N+ G
Sbjct: 125 KRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEA-EELCFGKNVIGNG 183
Query: 73 YQ-PDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVNDA 114
+ +T N I++ KL D+ YS +D +CK A
Sbjct: 184 FSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKA 243
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
LY EM ++R+ DVV Y T+I ++ + + +M + P+V T + ++
Sbjct: 244 VKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 303
Query: 175 LCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI---FNTMTRMEL 231
LC++G++++A +L M K G +PD +TY CL + + K +I F M R +
Sbjct: 304 LCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGV 357
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
P + +Y +++ + + L ++K M TP+ Y+++ID L + G + A E
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMARE 417
Query: 292 LVNEMHSRGLPPN 304
EM RGL P
Sbjct: 418 YEEEMIERGLSPR 430
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ +N ++ ++ I + ++M R P++ T N +I C G++ A+ +L
Sbjct: 259 VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLD 318
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
+ KRG QPD+IT+ + +L +P ++ +L+ M+ +
Sbjct: 319 EMPKRGCQPDSITYMCLF---SRLEKPSEIL------------------SLFGRMIRSGV 357
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
P + TY L+ F G L+ + + M PD ++ ++DAL ++G + A+
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMARE 417
Query: 187 VLAVMIKGGEKP 198
MI+ G P
Sbjct: 418 YEEEMIERGLSP 429
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 141/263 (53%), Gaps = 1/263 (0%)
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTF 168
+ A+ L+ EM V ++ L+S + +L EA+ ++ K I PD+ T+
Sbjct: 137 MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
+ ++ ALC++G + + ++ + K G +PD++++++L++ + + + I++ M
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 229 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
L+P+++SY+ + GL + K DALNL M TE I+P+V TY++LI + +
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
+ NEM +GL P+ +TY L+ LCK +D A+ + ++ +L Y +++
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVE 376
Query: 349 GLCKGGRLKDAQEVFQDLLIKGY 371
L G++ +A ++ ++ ++ Y
Sbjct: 377 RLMGAGKIDEATQLVKNGKLQSY 399
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 129/246 (52%), Gaps = 3/246 (1%)
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
D V L+ GY + E A +F+ M + V+S++ +++ K +D+A+ F
Sbjct: 123 DFVIRIMLLYGYSGMAE--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTF 180
Query: 259 KQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
K++ + ITP++VTY+++I LC+ G + D + E+ G P++I++++LL+ +
Sbjct: 181 KELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR 240
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
+ MK + + PN+ +Y + GL + + DA + + +G + DV T
Sbjct: 241 RELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHT 300
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
Y +I D +E + ++M++ G TP+ VTY ++I L +KGD D+A ++ + I
Sbjct: 301 YNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAI 360
Query: 438 ARGLLT 443
LL+
Sbjct: 361 KHKLLS 366
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 128/248 (51%), Gaps = 5/248 (2%)
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTM-TRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
V ++++L+ Y ++++A F + ++ + PD+ +Y+ MI LC+ +DD L++F
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
+++ P+++++++L++ + + + + M S+ L PN+ +Y+S + L +N
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY 378
+A++LI MK +GI P+V+TY L+ L++ + + ++ KG D TY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
++I LCK G D A+ + + + Y+ ++ L G D+A Q++
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT----QLVK 392
Query: 439 RGLLTGLF 446
G L F
Sbjct: 393 NGKLQSYF 400
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFR-RVMPDLFTFNILINCYCHLGQITSAFSVL 65
+ FN ++ V +K A+ +++ + + PDL T+N +I C G + S+
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 66 CNIFKRGYQPDTITFNTIIK-----------------IQGKLAQPDVVMYSTIIDSLCKD 108
+ K G++PD I+FNT+++ ++ K P++ Y++ + L ++
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
K DA NL M + ISPDV TY LI+ + + L+E + N+M K + PD T+
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 169 SILVDALCKEGKVKEAKNVLAVMIK 193
+L+ LCK+G + A V IK
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIK 361
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 123/250 (49%), Gaps = 17/250 (6%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIID 103
+FN L++ Y + ++ A TF + + G PD+V Y+T+I
Sbjct: 159 SFNALLSAYVNSKKLDEAMK---------------TFKELPEKLG--ITPDLVTYNTMIK 201
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
+LC+ ++D +++ E+ PD++++ TL+ F E + + M K+++P
Sbjct: 202 ALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSP 261
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
++ +++ V L + K +A N++ VM G PDV TY++L+ Y + N + + +
Sbjct: 262 NIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCY 321
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
N M L PD +Y ++I LCK +D A+ + ++ + Y +++ L +
Sbjct: 322 NEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGA 381
Query: 284 GRISDAWELV 293
G+I +A +LV
Sbjct: 382 GKIDEATQLV 391
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 19/283 (6%)
Query: 48 LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCK 107
+IN Y +G +A V + +R + ++FN ++ ++
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALL------------------NACVN 153
Query: 108 DKLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K + ++ E+ K I PDV +Y TLI G C G EAV L++++ K + PD
Sbjct: 154 SKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHI 213
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
TF+IL+ +GK +E + + A M++ K D+ +Y++ + G + N+ + +F+ +
Sbjct: 214 TFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKL 273
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
EL PDV +++ MI G +D+A+ +K++ P ++SL+ +CK+G +
Sbjct: 274 KGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDL 333
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
A+EL E+ ++ L + ++DAL K D A +++
Sbjct: 334 ESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+ +++ Y V A+ +F+ M S++ ++N K D +FK++
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 264 E-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
+ +I P+V +Y++LI GLC G ++A L++E+ ++GL P+ IT++ LL +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 382
+ +M + + ++ +Y L GL + ++ +F L DV T+T MI
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 383 NGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
G +G DEA+ ++E NGC P + ++ A+ + GD + A +L +++ A+ LL
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 132/267 (49%), Gaps = 1/267 (0%)
Query: 99 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
+ II+ + + +A ++ EM + +++ L++ + G+ ++
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 159 K-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
K SI PDV +++ L+ LC +G EA ++ + G KPD +T++ L+ +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
+ E I+ M + D++SY+ + GL ++ ++LF ++ + P+V T++++I
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
G G++ +A E+ G P ++SLL A+CK +++A L K++ + +L
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQ 364
+ ++D L KG + +A+E+ +
Sbjct: 350 VDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 127/266 (47%), Gaps = 13/266 (4%)
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCK-------EGKVKEAKNVL 188
+I+ + VG + A + ++M ++ +F+ L++A EG KE L
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
++ +PDV +Y++L+ G C +A + + + L PD +++I+++
Sbjct: 172 SI------EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTK 225
Query: 249 KMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 308
++ ++ +M +N+ ++ +Y++ + GL + + L +++ L P+V T+
Sbjct: 226 GKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTF 285
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
++++ +D AI+ K+++ G P + + LL +CK G L+ A E+ +++
Sbjct: 286 TAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFA 345
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEA 394
K +D +++ L K DEA
Sbjct: 346 KRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 111/248 (44%), Gaps = 19/248 (7%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFR-RVMPDLFTFNILINCYCHLGQITSAFSVLC 66
+ FN + V +K + + +++ + + PD+ ++N LI C G T A +++
Sbjct: 142 LSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALID 201
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
I +G +PD ITFN ++ +S K K + +++ M+ K +
Sbjct: 202 EIENKGLKPDHITFNILLH-----------------ESYTKGKF-EEGEQIWARMVEKNV 243
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
D+ +Y + G + + +E V L +++ + PDV+TF+ ++ EGK+ EA
Sbjct: 244 KRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAIT 303
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+ K G +P ++SL+ C ++ A ++ + L D +++ L
Sbjct: 304 WYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALV 363
Query: 247 KIKMVDDA 254
K D+A
Sbjct: 364 KGSKQDEA 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 17/204 (8%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P + +N L + A++L +++ + + PD TFNIL++ G+
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 64 VLCNIFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLC 106
+ + ++ + D ++N + K++G +PDV ++ +I
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
+ +++A Y E+ P + +L+ C G L+ A L ++ K + D
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 167 TFSILVDALCKEGKVKEAKNVLAV 190
+VDAL K K EA+ ++ +
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVEL 377
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 167/373 (44%), Gaps = 24/373 (6%)
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
+ Y+P T+ + K+ G QPD A L+ ML++ + P
Sbjct: 137 QHWYEPRCKTYTKLFKVLGNCKQPD------------------QASLLFEVMLSEGLKPT 178
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN---PDVYTFSILVDALCKEGKVKEAKN 186
+ YT+LIS + L +A L M KS++ PDV+TF++L+ CK G+ K+
Sbjct: 179 IDVYTSLISVYGKSELLDKAFSTLEYM--KSVSDCKPDVFTFTVLISCCCKLGRFDLVKS 236
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR-MELAPDVQSYSIMINGL 245
++ M G VTY++++DGY + E + M + PDV + + +I
Sbjct: 237 IVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY 296
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
+ + + + + + P++ T++ LI K+G +++ M R
Sbjct: 297 GNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTT 356
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
+TY+ +++ K ++ + +KMK+QG+ PN TY L++ K G + V +
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
++ LD + +IN + G L +ME+ C P+ +T+ +I G
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 476
Query: 426 NDKAEKLLRQMIA 438
D ++L +QMI+
Sbjct: 477 FDAVQELEKQMIS 489
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 18/286 (6%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ------- 92
PD+FTF +LI+C C LG+ S++ + G T+T+NTII GK
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 93 -----------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC 141
PDV ++II S + + + YS + PD+ T+ LI F
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 332
Query: 142 IVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
G K+ +++ M + + T++I+++ K G++++ +V M G KP+ +
Sbjct: 333 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
TY SL++ Y V K + + + ++ D ++ +IN + + L+ QM
Sbjct: 393 TYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
P+ +T++++I G EL +M S + +T
Sbjct: 453 EERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIGKKRLT 498
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
+D KE + + A + ++ K +P TY+ L + ++A +F M
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-ENITPNVVTYSSLIDGLCKSGRISDA 289
L P + Y+ +I+ K +++D A + + M + + P+V T++ LI CK GR
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG-ILPNVYTYTILLD 348
+V EM G+ + +TY++++D K + S++ M G LP+V T ++
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIG 294
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
G ++ + + + G D+ T+ I+I K G++ + ++M ME +
Sbjct: 295 SYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSL 354
Query: 409 NAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
VTY I+I + G +K + + R+M +G+
Sbjct: 355 TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGV 387
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + N S ++ S + V PD+ TFNILI + G SV
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ + KR + T+T+N +I+ GK + + +++ +M +
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGR------------------IEKMDDVFRKMKYQ 385
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
+ P+ +TY +L++ + G + + +L Q+V + D F+ +++A + G +
Sbjct: 386 GVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATM 445
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
K + M + KPD +T+++++ Y A IF+ + +E
Sbjct: 446 KELYIQMEERKCKPDKITFATMIKTY-------TAHGIFDAVQELE 484
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 208/440 (47%), Gaps = 50/440 (11%)
Query: 29 LSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQG 88
+ + + F P +F N+LIN Y + A +
Sbjct: 83 ICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF----------------------D 120
Query: 89 KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKE 148
++ Q +V+ ++T+I + K K+ A L ML + P+V TY++++ + +
Sbjct: 121 QMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS---CNGMSD 177
Query: 149 AVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
L ++ + + DV+ S L+D K G+ ++A +V M+ G D + ++S++
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG----DAIVWNSIIG 233
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
G+ + + A ++F M R + + + ++ + +++ L + +H
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE--LGMQAHVHIVKYDQ 291
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
+++ ++L+D CK G + DA + N+M R +VIT+S+++ L +N + A+ L
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLF 347
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD-VRT-YTIMINGLC 386
++MK G PN T +L G L+D F+ + K Y +D VR Y MI+ L
Sbjct: 348 ERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK-KLYGIDPVREHYGCMIDLLG 406
Query: 387 KDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA-------- 438
K G D+A+ L+++ME C P+AVT+ ++ A + + AE +++IA
Sbjct: 407 KAGKLDDAVKLLNEME---CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 439 RGLLTGLFYATE-FEAVEEL 457
LL+ ++ ++ +++VEE+
Sbjct: 464 YTLLSNIYANSQKWDSVEEI 483
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 204/479 (42%), Gaps = 55/479 (11%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFN-ILINCYCHLGQITSA 61
P +I + ++ K K + A+ L M V P+++T++ +L +C ++
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC----NGMSDV 178
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+ C I K G + D + +I + KL +P+ DA +++ EM
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPE------------------DALSVFDEM 220
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
++ D + + ++I GF + A+ L +M + T + ++ A +
Sbjct: 221 ----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
+ ++K + D++ ++L+D YC + A +FN M DV ++S M
Sbjct: 277 ELGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKE----RDVITWSTM 330
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS-RG 300
I+GL + +AL LF++M + PN +T ++ +G + D W M G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+ P Y ++D L K +D+A+ L+ +M+ + P+ T+ LL G C+ R
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTLL-GACRVQRNMVLA 446
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN------GCTPNAVTYE 414
E +I D TYT++ N +D + ++M D GC+ V +
Sbjct: 447 EYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Query: 415 IIIYALFQKGDNDKAE-----KLLRQMIARGLLTGLFYATEFEAV-EELSAPGLRSPVR 467
I + + GDN + K L Q+I R LTG+ Y E V ++L + +R
Sbjct: 507 IHAFII---GDNSHPQIVEVSKKLNQLIHR--LTGIGYVPETNFVLQDLEGEQMEDSLR 560
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 152/384 (39%), Gaps = 80/384 (20%)
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGF---CIVGQLKEAVGLLNQMVLKSINPDV 165
K V L+ ++ R S T L+S F C L A+ ++ + + D
Sbjct: 2 KSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADS 61
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
T+S L+ V E + + G +P + + L++ Y N +N A +F+
Sbjct: 62 ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS---------- 275
M + +V S++ MI+ K K+ AL L M +N+ PNV TYSS
Sbjct: 122 MPQ----RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177
Query: 276 ----------------------LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
LID K G DA + +EM + + I ++S++
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIG 233
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYT----------------------------- 344
+N D A+ L K+MK G + T T
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL 293
Query: 345 ----ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
L+D CK G L+DA VF + + DV T++ MI+GL ++G EAL L +
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFER 349
Query: 401 MEDNGCTPNAVTYEIIIYALFQKG 424
M+ +G PN +T +++A G
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAG 373
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 153/319 (47%), Gaps = 9/319 (2%)
Query: 128 PDVVTYTTLISGFCIVGQLKEAVG---LLNQMVLKSINPDVYTFSI---LVDALCKEGKV 181
P Y L G + Q ++ VG L +MV S + +F+ ++ L K K+
Sbjct: 203 PSDECYVVLFDG---LNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKL 259
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
+ A + G K D TY++LM + KA +I+ +M + + D +Y ++
Sbjct: 260 EVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELI 319
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
I L K +D A LF+QM + P+ +SSL+D + K+GR+ + ++ EM G
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE 361
P+ + SL+D+ K +D A+ L +MK G PN YT++++ K G+L+ A
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMT 439
Query: 362 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
VF+D+ G+ TY+ ++ G D A+ + + M + G P +Y ++ L
Sbjct: 440 VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA 499
Query: 422 QKGDNDKAEKLLRQMIARG 440
K D A K+L +M A G
Sbjct: 500 NKRLVDVAGKILLEMKAMG 518
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 165/386 (42%), Gaps = 22/386 (5%)
Query: 78 ITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLI 137
+ F K Q + D Y+ ++ L A+ +Y M D TY +I
Sbjct: 261 VAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELII 320
Query: 138 SGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK 197
G+L A L QM + + P FS LVD++ K G++ + V M G +
Sbjct: 321 PSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHR 380
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
P + SL+D Y +++ A +++ M + P+ Y+++I K ++ A+ +
Sbjct: 381 PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTV 440
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
FK M P TYS L++ SG++ A ++ N M + GL P + +Y SLL L
Sbjct: 441 FKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLAN 500
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL---- 373
VD A ++ +MK G +V +L+ +KDA DL +K
Sbjct: 501 KRLVDVAGKILLEMKAMGYSVDVCASDVLMI------YIKDAS---VDLALKWLRFMGSS 551
Query: 374 DVRTYTIMINGL----CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
++T +I L K+GL+D A L+ + + + V Y I+ L + D DK
Sbjct: 552 GIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKE 611
Query: 430 EKLLR-----QMIARGLLTGLFYATE 450
+L+ + A + GLF E
Sbjct: 612 RQLMSILSATKHKAHAFMCGLFTGPE 637
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 143/327 (43%), Gaps = 19/327 (5%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK 85
A + + M+ + D T+ ++I G++ +AF + + +R +P F++++
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 86 IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
GK + D M +Y EM P + +LI + G+
Sbjct: 357 SMGKAGRLDTSM------------------KVYMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
L A+ L ++M P+ +++++++ K GK++ A V M K G P TYS
Sbjct: 399 LDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSC 458
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
L++ + +V+ A I+N+MT L P + SY ++ L ++VD A + +M
Sbjct: 459 LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
+ +V S ++ K + A + + M S G+ N L ++ KN D+A
Sbjct: 519 YSVDVCA-SDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSAR 577
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCK 352
L++ + H ++ YT +L L +
Sbjct: 578 PLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%)
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+Y+ +I L K + ++ A FK+ + TY++L+ G A+E+ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
+ TY ++ +L K+ +D A L ++MK + + P+ ++ L+D + K GRL
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
+ +V+ ++ G+ + +I+ K G D AL L +M+ +G PN Y +I
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 417 IYALFQKGDNDKAEKLLRQMIARGLL 442
I + + G + A + + M G L
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFL 450
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 179/341 (52%), Gaps = 32/341 (9%)
Query: 80 FNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG 139
FN + I ++P V +I LCK + +A L+ + + DVVT+T +I+G
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITG 86
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
+ +G ++EA L +++ + +V T++ +V + ++ A+ + M + +
Sbjct: 87 YIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEM----PERN 139
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
VV++++++DGY ++KA ++F+ M ++ S++ M+ L + +D+A+NLF+
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
+M +VV++++++DGL K+G++ +A L + M R N+I++++++ +N+
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNN 247
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
+D A L + M + + ++ ++ G + + A +F + K +V ++T
Sbjct: 248 RIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWT 299
Query: 380 IMINGLCKDGLFDEALALMSKM-EDNGCTPNAVTYEIIIYA 419
MI G ++ +EAL + SKM D PN TY I+ A
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 161/316 (50%), Gaps = 50/316 (15%)
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
L+ + S P V L+ LCK GK+ EA+ + G + DVVT++ ++ GY
Sbjct: 33 LVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARK----LFDGLPERDVVTWTHVITGYI 88
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
+ ++ +A ++F+ R++ +V +++ M++G + K + A LF++M N VV
Sbjct: 89 KLGDMREARELFD---RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN----VV 141
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
+++++IDG +SGRI A EL +EM R N+++++S++ AL + +D A++L ++M
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ----------DLLIKGY---------- 371
+ +V ++T ++DGL K G++ +A+ +F + +I GY
Sbjct: 198 PRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEAD 253
Query: 372 -------NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
D ++ MI G ++ ++A L +M + N +++ +I +
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENK 309
Query: 425 DNDKAEKLLRQMIARG 440
+N++A + +M+ G
Sbjct: 310 ENEEALNVFSKMLRDG 325
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 202/473 (42%), Gaps = 89/473 (18%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ + + +++K + A L Q+M R V+ ++N +I+ Y G+I A +
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSGRIDKALELFD 164
Query: 67 NIFKRGYQPDTITFNTIIKI---QGKLAQP----------DVVMYSTIIDSLCKDKLVND 113
+ +R + +++N+++K +G++ + DVV ++ ++D L K+ V++
Sbjct: 165 EMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDE 220
Query: 114 AYNLYSEMLAKRI---------------------------SPDVVTYTTLISGFCIVGQL 146
A L+ M + I D ++ T+I+GF ++
Sbjct: 221 ARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREM 280
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSS 205
+A GL ++M K +V +++ ++ + + +EA NV + M++ G KP+V TY S
Sbjct: 281 NKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
++ + + + + I +++ + S ++N K + A +F
Sbjct: 337 ILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV-- 394
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
++++++S+I G +A E+ N+M G P+ +TY +LL A V+ +
Sbjct: 395 CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
Query: 326 SLIKKMKHQGILP-NVYTYTILLDGLCKGGRLKD-------------------------- 358
K + LP YT L+D + GRLKD
Sbjct: 455 EFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNV 514
Query: 359 ------AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
A+EV + +L G + D TY +M N +G +EA + KM++ G
Sbjct: 515 HNEVSIAKEVVKKVLETGSD-DAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 17/190 (8%)
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP-NVITYSSLLD 313
NL + +++ + P V LI LCK G+I++A +L + GLP +V+T++ ++
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFD-----GLPERDVVTWTHVIT 85
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
K + A L ++ + NV T+T ++ G + +L A+ +FQ++ +
Sbjct: 86 GYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER---- 138
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
+V ++ MI+G + G D+AL L +M + N V++ ++ AL Q+G D+A L
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 434 RQMIARGLLT 443
+M R +++
Sbjct: 195 ERMPRRDVVS 204
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 152/318 (47%), Gaps = 2/318 (0%)
Query: 120 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG 179
E + + V TY++ I F + +A+ + + +S +VY + ++ L K G
Sbjct: 122 EWMQQHGKISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNG 180
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV-NEVNKAEDIFNTMTRMELAPDVQSY 238
K+ + M + G KPDVVTY++L+ G V N KA ++ + + D Y
Sbjct: 181 KLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMY 240
Query: 239 SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS 298
++ ++A N +QM E +PN+ YSSL++ G A EL+ EM S
Sbjct: 241 GTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKS 300
Query: 299 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
GL PN + ++LL K D + L+ +++ G N Y +L+DGL K G+L++
Sbjct: 301 IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEE 360
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
A+ +F D+ KG D +IMI+ LC+ F EA L E + V ++
Sbjct: 361 ARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLC 420
Query: 419 ALFQKGDNDKAEKLLRQM 436
A + G+ + +++++M
Sbjct: 421 AYCRAGEMESVMRMMKKM 438
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 189/408 (46%), Gaps = 21/408 (5%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPD 76
V K+ + A+ + Q + +++ N +++C G++ S + + + G +PD
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 77 TITFNTIIK--IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYT 134
+T+NT++ I+ K P + L E+ I D V Y
Sbjct: 201 VVTYNTLLAGCIKVKNGYPKAI-------------------ELIGELPHNGIQMDSVMYG 241
Query: 135 TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 194
T+++ G+ +EA + QM ++ +P++Y +S L+++ +G K+A ++ M
Sbjct: 242 TVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSI 301
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G P+ V ++L+ Y +++ ++ + + A + Y ++++GL K +++A
Sbjct: 302 GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
++F M + + + S +I LC+S R +A EL + + +++ +++L A
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCA 421
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
C+ +++ + ++KKM Q + P+ T+ IL+ K A + D+ KG+ L+
Sbjct: 422 YCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLE 481
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
+ +I L K EA ++ + + + T +E I++ L Q
Sbjct: 482 EELCSSLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQ 529
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 140/291 (48%), Gaps = 13/291 (4%)
Query: 179 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 238
G+ ++ + M + G K V TYSS + + V+KA +I+ ++ +V
Sbjct: 112 GRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYIC 169
Query: 239 SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK-SGRISDAWELVNEMH 297
+ +++ L K +D + LF QM + + P+VVTY++L+ G K A EL+ E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLK 357
G+ + + Y ++L N + A + I++MK +G PN+Y Y+ LL+ G K
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
A E+ ++ G + T ++ K GLFD + L+S++E G N + Y +++
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 418 YALFQKGDNDKAEKLLRQMIARG----------LLTGLFYATEFEAVEELS 458
L + G ++A + M +G +++ L + F+ +ELS
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELS 400
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 163/390 (41%), Gaps = 52/390 (13%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N + LVK + I L QM + PD+ T+N L+ C K
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL--------------AGCIKVK 215
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
GY P I I ++ Q D VMY T++ + +A N +M + SP++
Sbjct: 216 NGY-PKAIEL--IGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNI 272
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
Y++L++ + G K+A L+ +M + P+ + L+ K G ++ +L+
Sbjct: 273 YHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSE 332
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
+ G + + Y LMDG ++ +A IF+ M + D + SIMI+ LC+ K
Sbjct: 333 LESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKR 392
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP------- 303
+A L + T ++V ++++ C++G + ++ +M + + P
Sbjct: 393 FKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHI 452
Query: 304 ----------NVITYSSLLDALCKNHHVDNAI--SLI---KKMKHQGILPNVYT------ 342
+++ Y + LD K H ++ + SLI K++ Q +VY
Sbjct: 453 LIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSK 512
Query: 343 -------YTILLDGLCKGGRLKDAQEVFQD 365
+ +L L +G LKDA V +D
Sbjct: 513 RTICKELHEKILHILIQGNLLKDAYIVVKD 542
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 206/464 (44%), Gaps = 36/464 (7%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
I ++ F SL ++ ++ +L +Q+ +++ D + LI+ + SAF VL
Sbjct: 83 ISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEE 142
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS 127
F G + PDV + ++ L D + A L+ +M K +S
Sbjct: 143 AFSTGQE----------------IHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVS 184
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV-DALCKEGKVKEAKN 186
+ + + I FC + + + L++++ ++N + ++L+ +LCK + +A
Sbjct: 185 LNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFY 244
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+L + KPD + Y + + + + + + + + ++ +AP Y I L
Sbjct: 245 ILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLI 304
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD---AWELVNEMHSRGLPP 303
K + +A K++ ++ + ++D L S D A E + M S G P
Sbjct: 305 SAKRLTEA----KEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLP 360
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
+ T S L LC++ D+ I + + +G + +Y++++ LCK GR++++
Sbjct: 361 AIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTAL 420
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQK 423
Q++ +G DV Y +I CK + A L +M GC N TY ++I L ++
Sbjct: 421 QEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEE 480
Query: 424 GDNDKAEKLLRQMIARG----------LLTGLFYATEFEAVEEL 457
G+ +++ +L +M+ RG L+ GL T+ EA E+
Sbjct: 481 GEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEV 524
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 35/337 (10%)
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
I+ SLCK DA+ + E+ PD + Y + F + G L E +L +
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG-------------------------- 194
+ P + + L ++ EAK V V++ G
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVE 348
Query: 195 --------GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
G+ P + T S L C ++ + + ++ ++QSYS+MI+ LC
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K V ++ ++M E + P+V Y++LI+ CK+ I A +L +EM G N+
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
TY+ L+ L + + ++ L KM +GI P+ Y L++GLCK +++ A EVF+
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKC 528
Query: 367 LIKGYN-LDVRTYTIMINGLCKDGLFDEALALMSKME 402
+ + + + R + + LC +G EA L+ + E
Sbjct: 529 MERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRERE 565
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 14/238 (5%)
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
P + T + L C + + + K ++ ++S+++ LCK G+V+E+
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
L M K G PDV Y++L++ C + A+ +++ M ++ +Y+++I L +
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 248 IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN---EMHSRGLPPN 304
+++L LF +M I P+ Y SLI+GLCK +I A E+ E + +
Sbjct: 480 EGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRR 539
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
V+ S + LC N H A L+++ +H L + + +LL C + DA+EV
Sbjct: 540 VL--SEFVLNLCSNGHSGEASQLLREREH---LEHTGAHVVLLK--C----VADAKEV 586
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +K +L + I + + + +L +++++I+ C G++ +++
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
L + K G PD +N +I++ CK +++ A L+ EM +
Sbjct: 420 LQEMKKEGLAPDVSLYN------------------ALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
++ TY LI G+ +E++ L ++M+ + I PD + L++ LCKE K++ A
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 185 KNVL 188
V
Sbjct: 522 MEVF 525
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 6/218 (2%)
Query: 212 LVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
L+N + A FN + + D SY + L + LFKQ+ + I +
Sbjct: 58 LLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDS 117
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
Y SLID L + A+ ++ E S G + + LL L + D A L K
Sbjct: 118 SVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVK 177
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI---MINGLCK 387
M+H+G+ N + + + C+ + + +K NL++ I +++ LCK
Sbjct: 178 MRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDE--VKKANLNINGSIIALLILHSLCK 235
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
+A ++ ++ + C P+ + Y +I A G+
Sbjct: 236 CSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGN 273
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/520 (21%), Positives = 217/520 (41%), Gaps = 84/520 (16%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
++ + L++ A ++ + P +FT N ++ + + +
Sbjct: 96 LDLHNHILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGF 155
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQPDVVM--YSTIIDSLCKDKLVNDAYNLYSEMLAKR 125
I + G P+ IT+N I + + +P++ + Y ID+
Sbjct: 156 INQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAP------------------- 196
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS--INPDVYTFSILVDALCKEGKVK- 182
++P + T+ L+ G L++A+ + M +K ++P VY++ ++ G VK
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM-------GCVKN 249
Query: 183 -EAKNVLAVMIK-----GGEKPDVVTYSSLMDGYCLVNEVNKAEDIF------NTMTRM- 229
+A VL + + GG D V Y LM GY + +A + + N+ RM
Sbjct: 250 SDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMS 309
Query: 230 -----------------------------------ELAPDVQSYSIMINGLCKIKMVDDA 254
LA ++ ++++M+NG C ++A
Sbjct: 310 AMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+ +F+QM +P+ +++++L++ LC + +++A +L EM + + P+ TY L+D
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
K +D + K M + PN+ Y L D L K G+L DA+ F D+++ +D
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMD 488
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKM-EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
Y ++ L + G DE L ++ +M +D+ + E + L + G EKL+
Sbjct: 489 DEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREGDLEKLM 548
Query: 434 RQ---MIARGLLTGLFYATEFEAVEELSAPGLRSPVRVED 470
+ + A L A E + + ++ L P VE+
Sbjct: 549 EEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEE 588
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 182/416 (43%), Gaps = 27/416 (6%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P P I +N + H+ A+ + M RV PD FTF L+ L +
Sbjct: 80 PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGK---------------LAQPDVVMYSTIIDSLCK 107
V +F+ G+ D N +I + K L + +V ++ I+ + +
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS--INPDV 165
+ +A ++S+M + PD V ++++ F + LK+ + +V I PD+
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
+ A C G+V AK + M + P+++ +++++ GY +A D+F+
Sbjct: 260 LISLNTMYAKC--GQVATAKILFDKM----KSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M ++ PD S + I+ ++ ++ A ++++ + + +V S+LID K G
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
+ A LV + R L +V+ +S+++ + AISL + M+ G+ PN T+
Sbjct: 374 VEGA-RLVFD---RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 401
LL G +++ F + N + Y +I+ L + G D+A ++ M
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 176/396 (44%), Gaps = 23/396 (5%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P I+ + ++ + A+ + QM V PD ++N + L +
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 63 SVLCNIFKRGYQ--PDT-ITFNTIIKIQGKLA----------QPDVVMYSTIIDSLCKDK 109
S+ ++ K G + PD I+ NT+ G++A P++++++ +I K+
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
+A +++ EM+ K + PD ++ T+ IS VG L++A + + DV+ S
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L+D K G V+ A+ V + DVV +S+++ GY L +A ++ M R
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTL----DRDVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
+ P+ ++ ++ MV + F +M I P Y+ +ID L ++G + A
Sbjct: 419 GVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
+E++ M + P V + +LL A K+ HV+ +++ I P+ + + L
Sbjct: 479 YEVIKCM---PVQPGVTVWGALLSACKKHRHVELGEYAAQQLF--SIDPSNTGHYVQLSN 533
Query: 350 LCKGGRLKD-AQEVFQDLLIKGYNLDVRTYTIMING 384
L RL D EV + KG N DV + + G
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 166/371 (44%), Gaps = 47/371 (12%)
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
L +P + ++ II ++ DA +YS M R+SPD T+ L+ + L+
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 150 VGLLNQMVLKSINPDVY---------------------------------TFSILVDALC 176
+ Q+ + DV+ +++ +V A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 177 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM--ELAPD 234
+ G+ EA + + M K KPD V S+++ + + ++ + I ++ +M E+ PD
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 235 VQSYSIMINGL-CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
+ I +N + K V A LF +M + PN++ ++++I G K+G +A ++
Sbjct: 259 LL---ISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMF 311
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
+EM ++ + P+ I+ +S + A + ++ A S+ + + +V+ + L+D K
Sbjct: 312 HEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
G ++ A+ VF L + DV ++ MI G G EA++L ME G PN VT+
Sbjct: 372 GSVEGARLVFDRTL----DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 414 EIIIYALFQKG 424
++ A G
Sbjct: 428 LGLLMACNHSG 438
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 191/447 (42%), Gaps = 21/447 (4%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P P I F+ +L K K + +I + +M ++PD L L
Sbjct: 77 PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGK 136
Query: 63 SVLCNIFKRGYQPDTITFNTII-------------KIQGKLAQPDVVMYSTIIDSLCKDK 109
+ C G D ++ K+ +++ DVV S ++ + +
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG 196
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
+ + + SEM + I ++V++ ++SGF G KEAV + ++ PD T S
Sbjct: 197 CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS 256
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
++ ++ + + + +IK G D S+++D Y V +FN M
Sbjct: 257 SVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMM 316
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
E A +Y I GL + +VD AL +F+ + + NVV+++S+I G ++G+ +A
Sbjct: 317 E-AGVCNAY---ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
EL EM G+ PN +T S+L A + + S +L NV+ + L+D
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
K GR+ +Q VF + K ++ + ++NG G E +++ + P+
Sbjct: 433 YAKCGRINLSQIVFNMMPTK----NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQM 436
+++ ++ A Q G D+ K + M
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMM 515
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 153/352 (43%), Gaps = 14/352 (3%)
Query: 91 AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI-SPDVVTYTTLISGFCIVGQLKEA 149
AQ D + + +I S NDA +++ + I P + ++++LI ++
Sbjct: 46 AQNDGYISAKLIASYSNYNCFNDA-----DLVLQSIPDPTIYSFSSLIYALTKAKLFTQS 100
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
+G+ ++M + PD + L + K K + V G D S+
Sbjct: 101 IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHM 160
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
Y + A +F+ M+ DV + S ++ + +++ + + +M + I N
Sbjct: 161 YMRCGRMGDARKVFDRMSD----KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
+V+++ ++ G +SG +A + ++H G P+ +T SS+L ++ + ++ +
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
+ QG+L + + ++D K G + +F + ++ I GL ++G
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM----MEAGVCNAYITGLSRNG 332
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
L D+AL + ++ N V++ II Q G + +A +L R+M G+
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/417 (18%), Positives = 177/417 (42%), Gaps = 22/417 (5%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I+ +N + ++ ++ A+ + Q++ PD T + ++ + +
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQP-------------DVVMYSTIIDSLCKDKLVND 113
+ K+G D + +I + GK + + + I L ++ LV+
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 114 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVD 173
A ++ + + +VV++T++I+G G+ EA+ L +M + + P+ T ++
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 174 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
A + ++ ++ +V S+L+D Y +N ++ +FN M L
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV- 455
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
++ ++NG + +++F+ + + P+ ++++SL+ + G + W+
Sbjct: 456 ---CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 294 NEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
M G+ P + YS +++ L + + A LIK+M + P+ + LL+ C+
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWGALLNS-CR 568
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
D E+ + L + TY ++ N G++ E ++ +KME G N
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 155/360 (43%), Gaps = 30/360 (8%)
Query: 27 ISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI 86
+ + +M+ + ++ ++N +++ + G A + I G+ PD +T ++++
Sbjct: 202 VRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPS 261
Query: 87 QGK---LAQPDVVMYSTIIDSLCKDKLVNDA-----------YNLYS-----EMLAKRIS 127
G L ++ I L KDK V A Y + S EM+ +
Sbjct: 262 VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC 321
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
I+G G + +A+ + +++ +V +++ ++ + GK EA +
Sbjct: 322 ------NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
M G KP+ VT S++ + + R+ L +V S +I+ K
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAK 435
Query: 248 IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
++ + +F M T+N+ V ++SL++G G+ + + + L P+ I+
Sbjct: 436 CGRINLSQIVFNMMPTKNL----VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 308 YSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
++SLL A + D K M + GI P + Y+ +++ L + G+L++A ++ +++
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 139/267 (52%), Gaps = 1/267 (0%)
Query: 99 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
+ II K + +A ++ EM + V+++ L+S + + + L N++
Sbjct: 113 ARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPG 172
Query: 159 K-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
K SI PD+ +++ L+ ALC++ + EA +L + G KPD+VT+++L+ L +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 218 KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI 277
E+I+ M +A D+++Y+ + GL + +NLF ++ + P+V +++++I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
G G++ +A E+ G P+ T++ LL A+CK ++AI L K+ + L
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQ 364
T L+D L KG + ++A+E+ +
Sbjct: 353 VGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 144/294 (48%), Gaps = 20/294 (6%)
Query: 18 VKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDT 77
K HY I L +Q +R + + F I I+ Y G +A V + R +
Sbjct: 87 AKRLHYVEEI-LEEQKKYRDMSKEGFAARI-ISLYGKAGMFENAQKVFEEMPNRDCKRSV 144
Query: 78 ITFNTII-----------------KIQGKLA-QPDVVMYSTIIDSLCKDKLVNDAYNLYS 119
++FN ++ ++ GKL+ +PD+V Y+T+I +LC+ + +A L
Sbjct: 145 LSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLD 204
Query: 120 EMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEG 179
E+ K + PD+VT+ TL+ + GQ + + +MV K++ D+ T++ + L E
Sbjct: 205 EIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEA 264
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
K KE N+ + G KPDV ++++++ G ++++AE + + + PD +++
Sbjct: 265 KSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFA 324
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
+++ +CK + A+ LFK+ ++ T L+D L K + +A E+V
Sbjct: 325 LLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 135/259 (52%), Gaps = 1/259 (0%)
Query: 177 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT-RMELAPDV 235
K G + A+ V M K V+++++L+ Y L + + E++FN + ++ + PD+
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
SY+ +I LC+ + +A+ L ++ + + P++VT+++L+ G+ E+ +
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M + + ++ TY++ L L ++L ++K G+ P+V+++ ++ G G+
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEI 415
+ +A+ +++++ GY D T+ +++ +CK G F+ A+ L + T +
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQ 360
Query: 416 IIYALFQKGDNDKAEKLLR 434
++ L + ++AE++++
Sbjct: 361 LVDELVKGSKREEAEEIVK 379
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 118/227 (51%), Gaps = 1/227 (0%)
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLI 277
A+ +F M + V S++ +++ K D LF ++ + +I P++V+Y++LI
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 187
Query: 278 DGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
LC+ + +A L++E+ ++GL P+++T+++LL + + + KM + +
Sbjct: 188 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVA 247
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
++ TY L GL + K+ +F +L G DV ++ MI G +G DEA A
Sbjct: 248 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAW 307
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
++ +G P+ T+ +++ A+ + GD + A +L ++ ++ L G
Sbjct: 308 YKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 118/222 (53%), Gaps = 11/222 (4%)
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GLPPNV 305
K M ++A +F++M + +V+++++L+ S + EL NE+ + + P++
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
++Y++L+ ALC+ + A++L+ +++++G+ P++ T+ LL G+ + +E++
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
++ K +D+RTY + GL + E + L +++ +G P+ ++ +I +G
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 426 NDKAEKLLRQMIARG----------LLTGLFYATEFEAVEEL 457
D+AE ++++ G LL + A +FE+ EL
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I+ +N +L + A++L +++ + + PD+ TFN L+ GQ +
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 65 LCNIFKRGYQPDTITFNT-------------IIKIQGKLA----QPDVVMYSTIIDSLCK 107
+ ++ D T+N ++ + G+L +PDV ++ +I
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+ +++A Y E++ PD T+ L+ C G + A+ L + K T
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTT 357
Query: 168 FSILVDALCKEGKVKEAKNVLAV 190
LVD L K K +EA+ ++ +
Sbjct: 358 LQQLVDELVKGSKREEAEEIVKI 380
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 192/408 (47%), Gaps = 31/408 (7%)
Query: 18 VKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCH-----LGQITSAFSVLCNIFKRG 72
V + + IS+ +M RV PD TF L+ + + LGQ T A +L + K
Sbjct: 38 VSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDP 97
Query: 73 YQPDTI--------TFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
+ ++ + ++ D+ +++++++ K L++DA L+ EM +
Sbjct: 98 FVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN-----PDVYTFSILVDALCKEG 179
+V++++ LI+G+ + G+ KEA+ L +M L N P+ +T S ++ A + G
Sbjct: 158 ----NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 180 KVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS 239
+++ K V A + K + D+V ++L+D Y + +A+ +FN + + DV++YS
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK---DVKAYS 270
Query: 240 IMINGLCKIKMVDDALNLFKQMHT-ENITPNVVTYSSLIDGLCKSGRISDAWELVNEM-H 297
MI L + D+ LF +M T +NI PN VT+ ++ G I++ M
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIE 330
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLK 357
G+ P++ Y ++D ++ + A S I M + P+V + LL G G +K
Sbjct: 331 EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME---PDVLIWGSLLSGSRMLGDIK 387
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
+ + LI+ ++ Y ++ N K G + E + +ME G
Sbjct: 388 TCEGALKR-LIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKG 434
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 114/208 (54%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVG 151
+PD+ Y+ +I C+ + +Y++ +EM K I P+ ++ +ISGF + E
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
+L M + +N V T++I + +LCK K KEAK +L M+ G KP+ VTYS L+ G+C
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
++ +A+ +F M PD + Y +I LCK + AL+L K+ +N P+
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFS 363
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSR 299
SL++GL K ++ +A EL+ ++ +
Sbjct: 364 IMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 147/317 (46%), Gaps = 12/317 (3%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ---LKEAV 150
D + +S +++L + K + NL + R PD+ + + Q L ++
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENR--PDLKSERFAAHAIVLYAQANMLDHSL 136
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSSLMDG 209
+ + I+ V + + L+ A KEAK V M K G +PD+ TY+ ++
Sbjct: 137 RVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKV 196
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+C + + I M R + P+ S+ +MI+G D+ + M +
Sbjct: 197 FCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIG 256
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
V TY+ I LCK + +A L++ M S G+ PN +TYS L+ C + A L K
Sbjct: 257 VSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK 316
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM---INGLC 386
M ++G P+ Y L+ LCKGG + A + ++ + K + V +++IM +NGL
Sbjct: 317 IMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNW---VPSFSIMKSLVNGLA 373
Query: 387 KDGLFDEALALMSKMED 403
KD +EA L+ ++++
Sbjct: 374 KDSKVEEAKELIGQVKE 390
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 147/316 (46%), Gaps = 20/316 (6%)
Query: 160 SINPDVY----TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG---YCL 212
S+ PD FS V+ L ++ N+L I+ +PD+ + Y
Sbjct: 71 SLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIEN--RPDLKSERFAAHAIVLYAQ 128
Query: 213 VNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPNVV 271
N ++ + +F + + E++ V+S + ++ K +A ++ +M I P++
Sbjct: 129 ANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLE 188
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
TY+ +I C+SG S ++ +V EM +G+ PN ++ ++ D ++ M
Sbjct: 189 TYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMM 248
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
K +G+ V TY I + LCK + K+A+ + +L G + TY+ +I+G C + F
Sbjct: 249 KDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDF 308
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ----------MIARGL 441
+EA L M + GC P++ Y +IY L + GD + A L ++ I + L
Sbjct: 309 EEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSL 368
Query: 442 LTGLFYATEFEAVEEL 457
+ GL ++ E +EL
Sbjct: 369 VNGLAKDSKVEEAKEL 384
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 211 CLV-NEVNKAEDIFNTMTRM-ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
CLV + +A+ ++ M +M + PD+++Y+ MI C+ + ++ +M + I P
Sbjct: 161 CLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKP 220
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
N ++ +I G + + +++ M RG+ V TY+ + +LCK A +L+
Sbjct: 221 NSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALL 280
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
M G+ PN TY+ L+ G C ++A+++F+ ++ +G D Y +I LCK
Sbjct: 281 DGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKG 340
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
G F+ AL+L + + P+ + ++ L + ++A++L+ Q+
Sbjct: 341 GDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%)
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
I PD+ TY +I FC G + ++ +M K I P+ +F +++ E K E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
VLA+M G V TY+ + C + +A+ + + M + P+ +YS +I+G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
C ++A LFK M P+ Y +LI LCK G A L E + P+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
SL++ L K+ V+ A LI ++K +
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIID 103
T+NI I C + A ++L + G +P+T+T YS +I
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT------------------YSHLIH 300
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP 163
C + +A L+ M+ + PD Y TLI C G + A+ L + + K+ P
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLA 189
LV+ L K+ KV+EAK ++
Sbjct: 361 SFSIMKSLVNGLAKDSKVEEAKELIG 386
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 23/278 (8%)
Query: 141 CIVGQLKEAVGL---LNQMVLKSINPDVYT---FSILVDALCKEGKVKEAKNVLAVMIKG 194
C++ + + GL L Q+ + +V T + L+ L +EG VKEA M +
Sbjct: 135 CLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEY 194
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT--RMELAPDVQSYSIMINGLCKIKM-- 250
KPDV Y+++++ C V KA + + M PD +Y+I+I+ C+ M
Sbjct: 195 HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQT 254
Query: 251 ---------VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
+ +A +F++M P+VVTY+ LIDG CK+ RI A EL +M ++G
Sbjct: 255 GCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI-LPNVYTYTILLDGLCKGGRLKDAQ 360
PN +TY+S + + ++ AI +++ MK G +P TYT L+ L + R +A+
Sbjct: 315 VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEAR 374
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGL---FDEAL 395
++ +++ G TY ++ + L +GL DE L
Sbjct: 375 DLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEEL 412
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 14/252 (5%)
Query: 99 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
+ ++ L ++ V +A + M PDV Y T+I+ C VG K+A LL+QM L
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 159 KSIN--PDVYTFSILVDALCKEG-----------KVKEAKNVLAVMIKGGEKPDVVTYSS 205
PD YT++IL+ + C+ G ++ EA + M+ G PDVVTY+
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-E 264
L+DG C N + +A ++F M P+ +Y+ I ++ A+ + + M
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
+ P TY+ LI L ++ R ++A +LV EM GL P TY + DAL
Sbjct: 349 HGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTL 408
Query: 325 ISLIKKMKHQGI 336
+ K +GI
Sbjct: 409 DEELHKRMREGI 420
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 28/290 (9%)
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE--VNKAEDIFNT 225
F L D L + + + KNV+ + + LM CL E V +A F
Sbjct: 143 FKGLWDFLRQVSRRENGKNVVTT----------ASITCLMK--CLGEEGFVKEALATFYR 190
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT--PNVVTYSSLIDGLCKS 283
M PDV +Y+ +IN LC++ A L QM P+ TY+ LI C+
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 284 G-----------RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
G R+ +A + EM RG P+V+TY+ L+D CK + + A+ L + MK
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL-DVRTYTIMINGLCKDGLF 391
+G +PN TY + ++ A E+ + + G+ + TYT +I+ L +
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
EA L+ +M + G P TY+++ AL +G ++ L + + G+
Sbjct: 371 AEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGI 420
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 20/255 (7%)
Query: 208 DGYCLV---NEVNKAEDIFNTMTRMELAPDV---QSYSIMINGLCKIKMVDDALNLFKQM 261
D CL+ N+ D ++R E +V S + ++ L + V +AL F +M
Sbjct: 132 DMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRM 191
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL--PPNVITYSSLLDALCK-- 317
+ P+V Y+++I+ LC+ G A L+++M G PP+ TY+ L+ + C+
Sbjct: 192 KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG 251
Query: 318 ---------NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI 368
+ A + ++M +G +P+V TY L+DG CK R+ A E+F+D+
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKT 311
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG-CTPNAVTYEIIIYALFQKGDND 427
KG + TY I + A+ +M M+ G P + TY +I+AL +
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
Query: 428 KAEKLLRQMIARGLL 442
+A L+ +M+ GL+
Sbjct: 372 EARDLVVEMVEAGLV 386
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 10/208 (4%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFR--RVMPDLFTFNILINCYCHLGQITSAF 62
P + +N +L + ++ A L QM R PD +T+ ILI+ YC G T
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
I +R ++ + + F ++ +G + PDVV Y+ +ID CK + A L+ +M
Sbjct: 258 KA---IRRRMWEANRM-FREML-FRGFV--PDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM-VLKSINPDVYTFSILVDALCKEGKV 181
K P+ VTY + I + + +++ A+ ++ M L P T++ L+ AL + +
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
EA++++ M++ G P TY + D
Sbjct: 371 AEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 52/238 (21%)
Query: 251 VDDALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT-- 307
+ AL F + T N +T + L K W+ + ++ R NV+T
Sbjct: 107 LQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTA 166
Query: 308 ------------------------------------YSSLLDALCKNHHVDNAISLIKKM 331
Y+++++ALC+ + A L+ +M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 332 KHQGIL--PNVYTYTILLDGLCKGG-----------RLKDAQEVFQDLLIKGYNLDVRTY 378
+ G P+ YTYTIL+ C+ G R+ +A +F+++L +G+ DV TY
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+I+G CK AL L M+ GC PN VTY I + + A +++R M
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 156/337 (46%), Gaps = 12/337 (3%)
Query: 93 PDVVMYSTIIDSLCK-------DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
P+++ + ++ LCK ++ + + E+ K+ D + L+ FC +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVD--EFNILLRAFCTERE 191
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
+KEA + ++ + NPDV T +IL+ + G V + M+K G KP+ VTY
Sbjct: 192 MKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGI 250
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
+DG+C +A +F M R++ VQ + +I+G + A LF ++
Sbjct: 251 RIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRG 310
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHH--VDN 323
+TP+ Y++L+ L K G +S A +++ EM +G+ P+ +T+ S+ + K+ +
Sbjct: 311 LTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNG 370
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
+KMK + ++P T +L+ C G + ++++ +L KGY ++
Sbjct: 371 VCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTT 430
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
LC ++A + + G + Y ++ +L
Sbjct: 431 ALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSL 467
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 131/313 (41%), Gaps = 21/313 (6%)
Query: 9 EFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNI 68
EFN + + A S+ +++ R PD+ T NIL+ + G +T+ +
Sbjct: 178 EFNILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYHEM 236
Query: 69 FKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
KRG++P+++T Y ID CK + +A L+ +M
Sbjct: 237 VKRGFKPNSVT------------------YGIRIDGFCKKRNFGEALRLFEDMDRLDFDI 278
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
V TTLI G + +A L +++ + + PD ++ L+ +L K G V A V+
Sbjct: 279 TVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVM 338
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNE--VNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
M + G +PD VT+ S+ G E N + + M L P + +++ C
Sbjct: 339 KEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFC 398
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
V+ L+L+K M + P+ L LC R +DA+E + RG +
Sbjct: 399 HNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEP 458
Query: 307 TYSSLLDALCKNH 319
Y L +L N+
Sbjct: 459 VYRMLETSLSSNN 471
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 197/441 (44%), Gaps = 31/441 (7%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRR--VMPDLFTFNILINCYCHLGQITSAF 62
P + N ++ + K Y+ +ISL Q F++ ++P++ ++N +IN +C G + A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYF-FKQSNIVPNVVSYNQIINAHCDEGNVDEAL 236
Query: 63 SVLCNIFKRG-YQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
V +I + P ++T+ + K L + + DA +L EM
Sbjct: 237 EVYRHILANAPFAPSSVTYRHLTK------------------GLVQAGRIGDAASLLREM 278
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
L+K + D Y LI G+ +G +AV +++ K D + ++ ++G
Sbjct: 279 LSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGND 338
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYS-- 239
KEA ++ + T + L++ + + ++A +FN M P++ S +
Sbjct: 339 KEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSD 398
Query: 240 ---IMINGLCKIKMVDDALNLFKQMHTENITPNVV----TYSSLIDGLCKSGRISDAWEL 292
IM+N K+ +A+N FK++ ++ + V Y +++ C+ G +++A
Sbjct: 399 TVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERF 458
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
E SR LP + ++ +++DA K +D+A+ ++ +M + + L K
Sbjct: 459 FAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIK 518
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
G+L ++ EV + + D Y +++ GLC D+A ++ +M + V
Sbjct: 519 NGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVL 578
Query: 413 YEIIIYALFQKGDNDKAEKLL 433
E II + G ++ EK+L
Sbjct: 579 REFIIEVFEKAGRREEIEKIL 599
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG- 300
+ L + +D A L +Q N P V T +++I + ++ R S++ L +
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKK-MKHQGILPNVYTYTILLDGLCKGGRLKDA 359
+ PNV++Y+ +++A C +VD A+ + + + + P+ TY L GL + GR+ DA
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 360 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
+ +++L KG D Y +I G G FD+A+ +++ CT Y+ I+ A
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK-CT----VYDGIVNA 326
Query: 420 -----LFQKGDNDKAEKLLRQMI 437
F+KG++ +A + R ++
Sbjct: 327 TFMEYWFEKGNDKEAMESYRSLL 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+ +L + +D A L ++ P V+T ++ + + R ++ +FQ K
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQ-YFFKQS 210
Query: 372 NL--DVRTYTIMINGLCKDGLFDEALALMSKMEDNGC-TPNAVTYEIIIYALFQKGDNDK 428
N+ +V +Y +IN C +G DEAL + + N P++VTY + L Q G
Sbjct: 211 NIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGD 270
Query: 429 AEKLLRQMIARG 440
A LLR+M+++G
Sbjct: 271 AASLLREMLSKG 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/322 (17%), Positives = 129/322 (40%), Gaps = 32/322 (9%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + + LV+ A SL ++M + D +N LI Y LG A
Sbjct: 249 APSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE 308
Query: 64 VL------CNI-------------FKRGYQPDTI-TFNTIIKIQGKLAQPDVVMYSTIID 103
C + F++G + + ++ +++ + ++ P + +++
Sbjct: 309 FFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPP---TGNVLLE 365
Query: 104 SLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI-----VGQLKEAVGLLNQMVL 158
K ++A+ L++EML P++++ + G + +G+ EA+ ++
Sbjct: 366 VFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGS 425
Query: 159 K-SINP---DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
K + P D + +V C++G + EA+ A + D ++ +++D Y
Sbjct: 426 KVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAE 485
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
++ A + + M + L + + L K + ++ + +M P+ Y
Sbjct: 486 RIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYD 545
Query: 275 SLIDGLCKSGRISDAWELVNEM 296
++ GLC + A ++V EM
Sbjct: 546 VVVRGLCDGDALDQAKDIVGEM 567
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 202/465 (43%), Gaps = 69/465 (14%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
I + + V K + A+ + +M + + FT + + LG++
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGV 188
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS 127
+ G++ + +T+ + G +P DA ++ EM
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPV------------------DARRVFDEM----PE 226
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVL-KSINPDVYTFSILVDALCKEGKVKEAKN 186
PDV+ +T ++S F +EA+GL M K + PD TF ++ A ++K+ K
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+ +I G +VV SSL+D Y V +A +FN M++ + S+S ++ G C
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK----KNSVSWSALLGGYC 342
Query: 247 KIKMVDDALNLFKQMHTENIT-------------------------------PNVVTYSS 275
+ + A+ +F++M +++ NV+ S+
Sbjct: 343 QNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA 402
Query: 276 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
LID KSG I A + ++M R N+IT++++L AL +N + A+S M +G
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT--YTIMINGLCKDGLFDE 393
I P+ ++ +L G + + + F L+ K Y + T Y+ MI+ L + GLF+E
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYFV-LMAKSYGIKPGTEHYSCMIDLLGRAGLFEE 517
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK-AEKLLRQMI 437
A L+ + E C +A + +++ D + AE++ ++M+
Sbjct: 518 AENLLERAE---CRNDASLWGVLLGPCAANADASRVAERIAKRMM 559
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 182/439 (41%), Gaps = 66/439 (15%)
Query: 53 CHLGQITSAFSVLCNIFK-------RGYQPDTITFNTIIK-IQGKLAQPDVVMYSTIIDS 104
C LGQ+T A +L + + Y T N + I G VV D
Sbjct: 37 CKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR 96
Query: 105 LCKDKLVNDAYNLYSEM------LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
+ L++ + L M R D +++T+++SG+ + +A+ + +MV
Sbjct: 97 NVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS 156
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
++ + +T S V A + G+V+ + V+I G + + S+L Y + E
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH---------------- 262
A +F+ M PDV ++ +++ K + ++AL LF MH
Sbjct: 217 ARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVL 272
Query: 263 --------------------TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLP 302
T I NVV SSL+D K G + +A ++ N M +
Sbjct: 273 TACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK--- 329
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
N +++S+LL C+N + AI + ++M+ + ++Y + +L ++ +E+
Sbjct: 330 -NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEI 384
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
+ +G +V + +I+ K G D A + SKM N +T+ ++ AL Q
Sbjct: 385 HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQ 440
Query: 423 KGDNDKAEKLLRQMIARGL 441
G ++A M+ +G+
Sbjct: 441 NGRGEEAVSFFNDMVKKGI 459
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 37/292 (12%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ----------- 92
+++ L+ YC G+ A IF+ + D F T++K LA
Sbjct: 333 SWSALLGGYCQNGEHEKAI----EIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQY 388
Query: 93 ------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
+V++ S +ID K ++ A +YS+M + +++T+ ++S G+
Sbjct: 389 VRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRG 444
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG-GEKPDVVTYSS 205
+EAV N MV K I PD +F ++ A G V E +N +M K G KP YS
Sbjct: 445 EEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSC 504
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE- 264
++D L+ E+ N + R E D + +++ G C DA + +++
Sbjct: 505 MID---LLGRAGLFEEAENLLERAECRNDASLWGVLL-GPCAANA--DASRVAERIAKRM 558
Query: 265 -NITPNVVTYSSLIDGLCKS-GRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+ P L+ + K+ GR DA + M RG+ V S +DA
Sbjct: 559 MELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTV--GQSWIDA 608
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 1/317 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+V++Y+ + K K + + L+ EML + I PD T+TT+IS G K AV
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+M PD T + ++DA + G V A ++ + D VT+S+L+ Y +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+ +I+ M + + P++ Y+ +I+ + + K A ++K + T TPN TY
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
++L+ ++ DA + EM +GL VI Y++LL N +VD A + + MK+
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 334 -QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
+ P+ +T++ L+ GR+ +A+ + G+ + T +I K D
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Query: 393 EALALMSKMEDNGCTPN 409
+ + ++ + G TP+
Sbjct: 474 DVVRTFDQVLELGITPD 490
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 19/340 (5%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
M+PS +I +N K+K + L +M R + PD TF +I+C G
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
A + G +PD +T +I G+ D+ A +LY
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDM------------------ALSLYDR 270
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
++ D VT++TLI + + G + + +M + P++ ++ L+D++ + +
Sbjct: 271 ARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKR 330
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
+AK + +I G P+ TY++L+ Y + A I+ M L+ V Y+
Sbjct: 331 PWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNT 390
Query: 241 MINGLCKIKMVDDALNLFKQM-HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+++ + VD+A +F+ M + E P+ T+SSLI SGR+S+A + +M
Sbjct: 391 LLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREA 450
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPN 339
G P + +S++ K VD+ + ++ GI P+
Sbjct: 451 GFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
S +V+ Y + F L+++ L ++M+ + I PD TF+ ++ + G K A
Sbjct: 172 SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE 231
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
M G +PD VT ++++D Y V+ A +++ + D ++S +I
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
D LN++++M + PN+V Y+ LID + ++ R A + ++ + G PN
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWS 351
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD-AQEVFQD 365
TY++L+ A + + D+A+++ ++MK +G+ V Y LL +C R D A E+FQD
Sbjct: 352 TYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQD 410
Query: 366 LL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+ + + D T++ +I G EA A + +M + G P +I +
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAK 470
Query: 425 DNDKAEKLLRQMIARGL 441
D + Q++ G+
Sbjct: 471 QVDDVVRTFDQVLELGI 487
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 159/340 (46%), Gaps = 21/340 (6%)
Query: 128 PDVVTYTTLISGFCIVGQL--KEAVGLLNQM------------VLKSINP--DVYTFSIL 171
P+ +I+GF G+L ++AV LN M +L+++ P +V +++
Sbjct: 124 PNEADVCDVITGFG--GKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVT 181
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
+ K +++++ + M++ G KPD T+++++ +A + F M+
Sbjct: 182 MKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGC 241
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
PD + + MI+ + VD AL+L+ + TE + VT+S+LI SG
Sbjct: 242 EPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLN 301
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
+ EM + G+ PN++ Y+ L+D++ + A + K + G PN TY L+
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 352 KGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF-DEALALMSKMED-NGCTPN 409
+ DA +++++ KG +L V Y +++ +C D + DEA + M++ C P+
Sbjct: 362 RARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIFQDMKNCETCDPD 420
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
+ T+ +I G +AE L QM G LF T
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT 460
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 147/345 (42%), Gaps = 21/345 (6%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
++ +N+ + + + + + + +RG +PD TF TII + P
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVP------- 226
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
A + +M + PD VT +I + G + A+ L ++ +
Sbjct: 227 -----------KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
D TFS L+ G N+ M G KP++V Y+ L+D +A+
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAK 335
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
I+ + P+ +Y+ ++ + + DDAL ++++M + ++ V+ Y++L+ +
Sbjct: 336 IIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SM 394
Query: 281 CKSGR-ISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
C R + +A+E+ +M + P+ T+SSL+ + V A + + +M+ G P
Sbjct: 395 CADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
++ T ++ K ++ D F +L G D R ++N
Sbjct: 455 TLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLN 499
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 133/261 (50%), Gaps = 10/261 (3%)
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR-MELAPDVQSYS 239
V EAK ++ G KP+ T++S+M + E E I+ M + +P+V SY+
Sbjct: 231 VDEAKKMI-----GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYN 285
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
+++ C ++ +A ++++M + ++V Y+++I GLC + + A EL +M +
Sbjct: 286 VLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLK 345
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK---GGRL 356
G+ +TY L++ CK VD+ + + ++MK +G + T L++GLC G R+
Sbjct: 346 GIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRV 405
Query: 357 KDAQEVFQDLLIKGYNLDVRT-YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEI 415
+A ++ +D + + R Y +++ LC+DG D AL + ++M G P+ TY
Sbjct: 406 VEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRA 465
Query: 416 IIYALFQKGDNDKAEKLLRQM 436
I GD + + L +M
Sbjct: 466 FIDGYGIVGDEETSALLAIEM 486
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 164/345 (47%), Gaps = 28/345 (8%)
Query: 12 KFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKR 71
K F SL+K+ + R F F++LI +I A V+ + R
Sbjct: 146 KVFRSLIKS--------------YNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSR 191
Query: 72 GYQPDTITFNTIIK--IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
G T N +I + + A MY + D V++A +M+ K I P+
Sbjct: 192 GINAQISTCNALITEVSRRRGASNGYKMYREVFG--LDDVSVDEA----KKMIGK-IKPN 244
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTFSILVDALCKEGKVKEAKNVL 188
T+ +++ F G+ + + +M + +P+VY++++L++A C G + EA+ V
Sbjct: 245 ATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVW 304
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
M G D+V Y++++ G C EV KA+++F M + +Y ++NG CK
Sbjct: 305 EEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKA 364
Query: 249 KMVDDALNLFKQMHTENITPNVVTYSSLIDGLC--KSG-RISDAWELVNEMHSRGL-PPN 304
VD L ++++M + + +T +L++GLC + G R+ +A ++V + + P+
Sbjct: 365 GDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPS 424
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
Y L+ LC++ +D A+++ +M +G P+ TY +DG
Sbjct: 425 RNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 124/242 (51%), Gaps = 8/242 (3%)
Query: 208 DGYCLVNEVNKAEDI-FNTMTRM--ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
+GY + EV +D+ + +M ++ P+ +++ M+ + + ++++M E
Sbjct: 215 NGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEE 274
Query: 265 -NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN 323
+PNV +Y+ L++ C G +S+A ++ EM RG+ +++ Y++++ LC N V
Sbjct: 275 VGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVK 334
Query: 324 AISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
A L + M +GI TY L++G CK G + V++++ KG+ D T ++
Sbjct: 335 AKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVE 394
Query: 384 GLC--KDG--LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
GLC +DG + + A + + + P+ YE+++ L + G D+A + +M+ +
Sbjct: 395 GLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK 454
Query: 440 GL 441
G
Sbjct: 455 GF 456
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFR-RVMPDLFTFNILINCYCHLGQITSAFS 63
P FN S + + ++M+ P+++++N+L+ YC G ++ A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 64 VLCNIFKRGYQPDTITFNTIIK--------IQGKLAQPDV---------VMYSTIIDSLC 106
V + RG D + +NT+I ++ K D+ + Y +++ C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFC--IVGQ-LKEAVGLLNQMVLKSI-N 162
K V+ +Y EM K D +T L+ G C GQ + EA ++ V +++
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 215
P + +LV LC++GK+ A N+ A M+ G KP TY + +DGY +V +
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
I+ +N L A L + M + + T+ L+N YC G + S V
Sbjct: 316 IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYR 375
Query: 67 NIFKRGYQPDTITFNTIIK---------------------IQGKLAQPDVVMYSTIIDSL 105
+ ++G++ D +T +++ ++ + P Y ++ L
Sbjct: 376 EMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRL 435
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
C+D ++ A N+ +EM+ K P TY I G+ IVG + + L +M
Sbjct: 436 CEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMA 487
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 117 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALC 176
++ M + D Y +I G C G+ EA + +++ + PDV T+++++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 177 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 236
+ + A+ + A MI+ G PD +TY+S++ G C N++ +A + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCS 107
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEM 296
+++ +ING CK V D +NLF +M+ I NV+TY++LI G + G + A ++ EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 297 HSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
S G+ + IT+ +L LC + A++++
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 110/205 (53%), Gaps = 15/205 (7%)
Query: 157 VLKSINPDVYT--FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
V++ N D+ T ++I++ LCK GK EA N+ ++ G +PDV TY+ ++ +
Sbjct: 4 VMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FS 59
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+ +AE ++ M R L PD +Y+ MI+GLCK + A ++ + T++
Sbjct: 60 SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFN 110
Query: 275 SLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ 334
+LI+G CK+ R+ D L EM+ RG+ NVITY++L+ + + A+ + ++M
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 335 GILPNVYTYTILLDGLCKGGRLKDA 359
G+ + T+ +L LC L+ A
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKA 195
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 112/214 (52%), Gaps = 13/214 (6%)
Query: 222 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
+F M + D Y+I+I+GLCK D+A N+F + + P+V TY+ +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVY 341
+ + A +L EM RGL P+ ITY+S++ LCK + + A + K +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCS 107
Query: 342 TYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 401
T+ L++G CK R+KD +F ++ +G +V TYT +I+G + G F+ AL + +M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 402 EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQ 435
NG +++T+ I+ L + + KA +L Q
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 34/230 (14%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
D +NI+I+ C G+ A ++ N+ G QPD T+N +I+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS------------ 60
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
+ A LY+EM+ + + PD +TY ++I G C +L +A +
Sbjct: 61 ----------LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RK 101
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
++ TF+ L++ CK +VK+ N+ M + G +V+TY++L+ G+ V + N A
Sbjct: 102 VSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTAL 161
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ---MHTENIT 267
DIF M + ++ ++ LC K + A+ + Q M + N+T
Sbjct: 162 DIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNVT 211
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 257 LFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 316
+FK M N+ + Y+ +I GLCK+G+ +A + + GL P+V TY+ ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 317 KNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 376
+ + A L +M +G++P+ TY ++ GLCK +L A++V +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS---------CS 107
Query: 377 TYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
T+ +ING CK + + L +M G N +TY +I+ Q GD + A + ++M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 437 IARGLLT 443
++ G+ +
Sbjct: 168 VSNGVYS 174
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N L K + A ++ + + PD+ T+N++I + LG+ ++ +
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKLYA---EMI 72
Query: 70 KRGYQPDTITFNTIIK---IQGKLAQPDVV-----MYSTIIDSLCKDKLVNDAYNLYSEM 121
+RG PDTIT+N++I Q KLAQ V ++T+I+ CK V D NL+ EM
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEM 132
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ I +V+TYTTLI GF VG A+ + +MV + TF ++ LC ++
Sbjct: 133 YRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKEL 192
Query: 182 KEA 184
++A
Sbjct: 193 RKA 195
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
EL EM RGL N +TY++L+ L + D A + K+M G+ P++ TY ILLDGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 351 CKGGRLK---------DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 401
CK G+L+ D ++F L +KG +V TYT MI+G CK G +EA L KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 402 EDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+++G P++ TY +I A + GD + +L+++M
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
++F M++ L + +Y+ +I GL + D A +FK+M ++ + P+++TY+ L+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 281 CK---------SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
CK +G++ D W+L + +G+ PNV+TY++++ CK + A +L +KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
K G LP+ TY L+ + G + E+ +++ + D TY ++ + + DG
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Query: 392 DEALALM 398
D+ M
Sbjct: 181 DKGFLEM 187
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 9/171 (5%)
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
+ LF++M + N VTY++LI GL ++G A E+ EM S G+PP+++TY+ LLD
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 315 LCKNHHVDNAI---------SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
LCKN ++ A+ L + +G+ PNV TYT ++ G CK G ++A +F+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
+ G D TY +I +DG + L+ +M +A TY ++
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 9/173 (5%)
Query: 152 LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYC 211
L +M + + + T++ L+ L + G A+ + M+ G PD++TY+ L+DG C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 212 ---------LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
+ +V D+F +++ + P+V +Y+ MI+G CK ++A LF++M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
+ P+ TY++LI + G + + EL+ EM S + TY + D L
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
L+ EM + + + VTYTTLI G G A + +MV + PD+ T++IL+D L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 176 CKE---------GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
CK GKV++ ++ + G KP+VVTY++++ G+C +A +F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
PD +Y+ +I + + L K+M + + TY + D + GR+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Query: 287 SDAW 290
+
Sbjct: 181 DKGF 184
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
+ L ++M +G++ N TYT L+ GL + G AQE+F++++ G D+ TY I+++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 385 LCKDGLFDEALALMSKMEDN----------GCTPNAVTYEIIIYALFQKGDNDKAEKLLR 434
LCK+G ++AL + K+ED G PN VTY +I +KG ++A L R
Sbjct: 61 LCKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 435 QMIARGLL 442
+M G L
Sbjct: 120 KMKEDGPL 127
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 70 KRGYQPDTITFNTIIKIQG-------KLAQ------------PDVVMYSTIIDSLCKD-K 109
+RG +T+T+ T+I QG +AQ PD++ Y+ ++D LCK+ K
Sbjct: 9 QRGLVGNTVTYTTLI--QGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 110 L--------VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI 161
L V D ++L+ + K + P+VVTYTT+ISGFC G +EA L +M
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
PD T++ L+ A ++G + ++ M D TY + D
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 14 FTSLVKTKHYATAISLSQQMDFRR-----VMPDLFTFNILINCYCHLGQITSAFSVLCNI 68
+T+L++ A ++Q++ F+ V PD+ T+NIL++ C G++ A
Sbjct: 19 YTTLIQGLFQAGDCDMAQEI-FKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVA---- 73
Query: 69 FKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
G D + ++G +P+VV Y+T+I CK +AY L+ +M P
Sbjct: 74 ---GKVEDGWDLFCSLSLKG--VKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP 128
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
D TY TLI G + L+ +M D T+ ++ D L
Sbjct: 129 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 11/215 (5%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF-----CIVGQLKE 148
D V ++ I S C+ +++ AY EM ++PDVVTYTTLIS C++G
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN--- 232
Query: 149 AVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
GL N MVLK P++ TF++ + L + +A ++L +M K +PD +TY+ ++
Sbjct: 233 --GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK 290
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
G+ L + AE ++ M P+++ Y MI+ LCK D A + K + P
Sbjct: 291 GFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYP 350
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
N+ T L+ GL K G++ A ++ +H R +PP
Sbjct: 351 NLDTVEMLLKGLVKKGQLDQAKSIMELVHRR-VPP 384
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 18/291 (6%)
Query: 48 LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCK 107
+I Y G A N+ G + +FN +++ PD+ TI + L
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLS--FNPDL---HTIWEFL-- 164
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT 167
+DA + Y I D V++ I FC +G L A + +M + PDV T
Sbjct: 165 ----HDAPSKYG------IDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVT 214
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
++ L+ AL K + + +M+ G KP++ T++ + A D+ M
Sbjct: 215 YTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMP 274
Query: 228 RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRIS 287
++++ PD +Y+++I G + D A ++ MH + PN+ Y ++I LCK+G
Sbjct: 275 KLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFD 334
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
A+ + + + PN+ T LL L K +D A S++ ++ H+ + P
Sbjct: 335 LAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELV 293
D S++I I C++ ++D A ++M +TP+VVTY++LI L K R L
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 294 NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
N M +G PN+ T++ + L +A L+ M + P+ TY +++ G
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 354 GRLKD-AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
R D A+ V+ + KGY +++ Y MI+ LCK G FD A + PN T
Sbjct: 296 -RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDT 354
Query: 413 YEIIIYALFQKGDNDKAEKLL 433
E+++ L +KG D+A+ ++
Sbjct: 355 VEMLLKGLVKKGQLDQAKSIM 375
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 2/206 (0%)
Query: 160 SINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKA 219
I+ D +F+I + + C+ G + A + M K G PDVVTY++L+
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 220 EDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDG 279
++N M P++ ++++ I L + DA +L M + P+ +TY+ +I G
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 280 LCKSGRISDAWELV-NEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
+ R D E V MH +G PN+ Y +++ LCK + D A ++ K + P
Sbjct: 292 FFLA-RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYP 350
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQ 364
N+ T +LL GL K G+L A+ + +
Sbjct: 351 NLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 160 SINPDVYT-FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
S NPD++T + L DA K G + I D V+++ + +C + ++
Sbjct: 152 SFNPDLHTIWEFLHDAPSKYG----------IDI------DAVSFNIAIKSFCELGILDG 195
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
A M + L PDV +Y+ +I+ L K + L+ M + PN+ T++ I
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
L R DA +L+ M + P+ ITY+ ++ D A + M +G P
Sbjct: 256 FLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKP 315
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
N+ Y ++ LCK G A + +D + K + ++ T +++ GL K G D+A ++M
Sbjct: 316 NLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
Query: 399 S 399
Sbjct: 376 E 376
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK--------IQG---- 88
D +FNI I +C LG + A+ + + K G PD +T+ T+I + G
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 89 -----KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV 143
K +P++ ++ I L + DA +L M ++ PD +TY +I GF +
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 144 GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
A + M K P++ + ++ LCK G A + ++ P++ T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTR 228
L+ G ++++A+ I + R
Sbjct: 356 EMLLKGLVKKGQLDQAKSIMELVHR 380
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
IM+ G K M AL+ F M +V ++++ + L + + WE +++ S+
Sbjct: 113 IMLYG--KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSK 170
Query: 300 -GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
G+ + ++++ + + C+ +D A +++M+ G+ P+V TYT L+ L K R
Sbjct: 171 YGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVI 230
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
++ +++KG ++ T+ + I L +A L+ M P+++TY ++I
Sbjct: 231 GNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK 290
Query: 419 ALFQKGDNDKAEKLLRQMIARG 440
F D AE++ M +G
Sbjct: 291 GFFLARFPDMAERVYTAMHGKG 312
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 189/455 (41%), Gaps = 72/455 (15%)
Query: 39 MPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ------ 92
P++F +N LIN + + + +I K G TF ++K + +
Sbjct: 73 FPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGID 132
Query: 93 -----------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD--VVTYTTLISG 139
DV ++++ +NDA+ L+ E+ PD VVT+T L SG
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI------PDRSVVTWTALFSG 186
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
+ G+ +EA+ L +MV + PD Y ++ A G + + ++ M + + +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
++L++ Y ++ KA +F++M + D+ ++S MI G + + LF
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 260 QMHTENITP-----------------------------------NVVTYSSLIDGLCKSG 284
QM EN+ P N+ ++LID K G
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
++ +E+ EM + +++ ++ + L KN HV + ++ + + GI P+ T+
Sbjct: 363 AMARGFEVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Query: 345 ILLDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
LL G G ++D F + + V Y M++ + G+ D+A L+ M
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP- 477
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
PNA+ + ++ D AE +L+++IA
Sbjct: 478 --MRPNAIVWGALLSGCRLVKDTQLAETVLKELIA 510
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 160/382 (41%), Gaps = 25/382 (6%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P ++ + F+ + + AI L ++M V PD + +++ H+G + S
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGK-------------LAQPDVVMYSTIIDSLCKDK 109
++ + + Q ++ T++ + K + + D+V +ST+I +
Sbjct: 233 WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFS 169
+ L+ +ML + + PD + +S +G L ++ + +++ +
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L+D K G + V M ++ D+V ++ + G V + +F ++
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEM----KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKL 408
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH-TENITPNVVTYSSLIDGLCKSGRISD 288
++PD ++ ++ G ++ D L F + + V Y ++D ++G + D
Sbjct: 409 GISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDD 468
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP-NVYTYTILL 347
A+ L+ +M R PN I + +LL A +++K++ + P N Y L
Sbjct: 469 AYRLICDMPMR---PNAIVWGALLSGCRLVKDTQLAETVLKEL--IALEPWNAGNYVQLS 523
Query: 348 DGLCKGGRLKDAQEVFQDLLIK 369
+ GGR +A EV +D++ K
Sbjct: 524 NIYSVGGRWDEAAEV-RDMMNK 544
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 193/452 (42%), Gaps = 37/452 (8%)
Query: 5 PPIIEFNKFFTSLVKTKH-YATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P FN L T + + A+SL ++M F + PD FT+N + L +I S
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKLAQ-------------PDVVMYSTIIDSLCKDKL 110
V ++FK G + D +++I + K Q D V ++++I +
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
DA +L+ +M + PD T +++ +G L+ L + K I + S
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
L+ K G + A+ V MI K D V +++++ Y + ++A +F M +
Sbjct: 274 LISMYGKCGDLDSARRVFNQMI----KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE----NITPNVVTYSSLIDGLCKSGRI 286
++PD + S +++ + AL L KQ+ T ++ N+ + L+D K GR+
Sbjct: 330 VSPDAGTLSTVLSACGSV----GALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
+A + M + N T+++++ A H A+ L +M + P+ T+ +
Sbjct: 386 EEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGV 438
Query: 347 LDGLCKGGRLKDAQEVFQDL-LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
L G + F ++ + G + YT +I+ L + G+ DEA M +
Sbjct: 439 LSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK- 497
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
P+ + I+ A ++ D EK +R ++
Sbjct: 498 --PDEIMLAAILGACHKRKDVAIREKAMRMLM 527
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 15/262 (5%)
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIK-GGEKPDVVTYSSLMDGYCLVNEVNKAE 220
P+ Y+F+ ++ L EA L +K G KPD TY+ + + E+
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 152
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+ +++ ++ L DV +I K V A LF ++ TE T V+++S+I G
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI-TERDT---VSWNSMISGY 208
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM---KHQGIL 337
++G DA +L +M G P+ T S+L A C + L+++M K G+
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGA-CSHLGDLRTGRLLEEMAITKKIGLS 267
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
+ + I + G C G L A+ VF ++ K D +T MI ++G EA L
Sbjct: 268 TFLGSKLISMYGKC--GDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKL 321
Query: 398 MSKMEDNGCTPNAVTYEIIIYA 419
+ME G +P+A T ++ A
Sbjct: 322 FFEMEKTGVSPDAGTLSTVLSA 343
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 155/343 (45%), Gaps = 32/343 (9%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDV--------- 95
+ +L+ Y + F + C + G D +T ++K G + V
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 96 ---------VMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
+ ++IID K +L+++A L+ + +VV +TTLISGF +
Sbjct: 238 RRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE----TSVDRNVVMWTTLISGFAKCERA 293
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
EA L QM+ +SI P+ T + ++ + G ++ K+V MI+ G + D V ++S
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 353
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
+D Y + A +F+ M +V S+S MIN + ++AL+ F +M ++N+
Sbjct: 354 IDMYARCGNIQMARTVFDMMPE----RNVISWSSMINAFGINGLFEEALDCFHKMKSQNV 409
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAI 325
PN VT+ SL+ SG + + W+ M G+ P Y+ ++D L + + A
Sbjct: 410 VPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAK 469
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD-AQEVFQDLL 367
S I M + P + LL C+ + D A E+ + LL
Sbjct: 470 SFIDNMP---VKPMASAWGALLSA-CRIHKEVDLAGEIAEKLL 508
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 8/190 (4%)
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
K +++D+A LF+ ++ NVV +++LI G K R +A++L +M + PN
Sbjct: 258 KCRLLDNARKLFET----SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
T +++L + + + S+ M GI + +T +D + G ++ A+ VF D+
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF-DM 372
Query: 367 LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
+ + +V +++ MIN +GLF+EAL KM+ PN+VT+ ++ A G+
Sbjct: 373 MPE---RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 427 DKAEKLLRQM 436
+ K M
Sbjct: 430 KEGWKQFESM 439
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 7/205 (3%)
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
+VV +++L+ G+ +A D+F M R + P+ + + ++ + + ++
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
M I + V ++S ID + G I A + + M R NVI++SS+++A N
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER----NVISWSSMINAFGIN 391
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVR 376
+ A+ KMK Q ++PN T+ LL G +K+ + F+ + + Y + +
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFES-MTRDYGVVPEEE 450
Query: 377 TYTIMINGLCKDGLFDEALALMSKM 401
Y M++ L + G EA + + M
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNM 475
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 117/254 (46%), Gaps = 21/254 (8%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFN-ILINCYCHLGQITSAFSVL 65
++ + + K + A L +QM ++P+ T IL++C LG + SV
Sbjct: 277 VVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC-SSLGSLRHGKSVH 335
Query: 66 CNIFKRGYQPDTITFNTIIKIQGK-------------LAQPDVVMYSTIIDSLCKDKLVN 112
+ + G + D + F + I + + + + +V+ +S++I++ + L
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTFSIL 171
+A + + +M ++ + P+ VT+ +L+S G +KE M + P+ ++ +
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
VD L + G++ EAK+ + M KP + +L+ + EV+ A +I + ME
Sbjct: 456 VDLLGRAGEIGEAKSFIDNM---PVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSME- 511
Query: 232 APDVQSYSIMINGL 245
P+ S ++++ +
Sbjct: 512 -PEKSSVYVLLSNI 524
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 88/142 (61%)
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M++ P +TY+S++DG+C + V+ A+ + ++M +PDV ++S +ING CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
VD+ + +F +MH I N VTY++LI G C+ G + A +L+NEM S G+ P+ IT+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 311 LLDALCKNHHVDNAISLIKKMK 332
+L LC + A ++++ ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%)
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M R + P +Y+ MI+G CK VDDA + M ++ +P+VVT+S+LI+G CK+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
+ + E+ EMH RG+ N +TY++L+ C+ +D A L+ +M G+ P+ T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 346 LLDGLCKGGRLKDAQEVFQDL 366
+L GLC L+ A + +DL
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 83/138 (60%)
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
+I P +TY+S+IDG CK R+ DA +++ M S+G P+V+T+S+L++ CK VDN
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
+ + +M +GI+ N TYT L+ G C+ G L AQ++ +++ G D T+ M+ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 385 LCKDGLFDEALALMSKME 402
LC +A A++ ++
Sbjct: 125 LCSKKELRKAFAILEDLQ 142
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 78/142 (54%)
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
ML I P +TY ++I GFC ++ +A +L+ M K +PDV TFS L++ CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
V + M + G + VTY++L+ G+C V +++ A+D+ N M +APD ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 241 MINGLCKIKMVDDALNLFKQMH 262
M+ GLC K + A + + +
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 82/142 (57%)
Query: 156 MVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 215
M+ SI P T++ ++D CK+ +V +AK +L M G PDVVT+S+L++GYC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 216 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
V+ +IF M R + + +Y+ +I+G C++ +D A +L +M + + P+ +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 276 LIDGLCKSGRISDAWELVNEMH 297
++ GLC + A+ ++ ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P + Y+++ID CK V+DA + M +K SPDVVT++TLI+G+C ++ + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
+M + I + T++ L+ C+ G + A+++L MI G PD +T+ ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 213 VNEVNKAEDIFNTMTRME 230
E+ KA I + + E
Sbjct: 128 KKELRKAFAILEDLQKSE 145
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%)
Query: 303 PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEV 362
P ITY+S++D CK VD+A ++ M +G P+V T++ L++G CK R+ + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 363 FQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQ 422
F ++ +G + TYT +I+G C+ G D A L+++M G P+ +T+ ++ L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 423 KGDNDKAEKLLRQM 436
K + KA +L +
Sbjct: 128 KKELRKAFAILEDL 141
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 18/151 (11%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM 97
+ P T+N +I+ +C ++ A +L ++ +G PD +TF
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTF----------------- 48
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
ST+I+ CK K V++ ++ EM + I + VTYTTLI GFC VG L A LLN+M+
Sbjct: 49 -STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 107
Query: 158 LKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
+ PD TF ++ LC + ++++A +L
Sbjct: 108 SCGVAPDYITFHCMLAGLCSKKELRKAFAIL 138
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%)
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
M I P TY ++DG CK R+ DA+ + + KG + DV T++ +ING CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
D + + +M G N VTY +I+ Q GD D A+ LL +MI+ G+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P I +N K A + M + PD+ TF+ LIN YC ++ + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAK 124
C + +RG +T+T Y+T+I C+ ++ A +L +EM++
Sbjct: 68 FCEMHRRGIVANTVT------------------YTTLIHGFCQVGDLDAAQDLLNEMISC 109
Query: 125 RISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
++PD +T+ +++G C +L++A +L +
Sbjct: 110 GVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 163/383 (42%), Gaps = 37/383 (9%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+V Y++++ L K+ ++ Y++ +EM+ + +SP+ T + FC G + EA+ L
Sbjct: 356 EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELY 415
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
P +++ L+ LC V++A +VL I G T+S+L + C
Sbjct: 416 RSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+ + A ++ +L P + +I+ LC + V+DAL + + + + + +
Sbjct: 476 GKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMF 535
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC------KN--------- 318
+SLI G R A +L+ M +G P Y +++ +C KN
Sbjct: 536 TSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQ 595
Query: 319 ----HHVDNAISLIKK-----------------MKHQGILPNVYTYTILLDGLCKGGRLK 357
H A +L + M GI P V + ++L K ++
Sbjct: 596 LSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIA 655
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIII 417
DA F DL +G R Y +MI GLCK D+A+ + +M+ G P+ YE+ I
Sbjct: 656 DALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNI 714
Query: 418 YALFQKGDNDKAEKLLRQMIARG 440
L + D+A L+ + G
Sbjct: 715 QKLCNEEKYDEAVGLVNEFRKSG 737
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/450 (20%), Positives = 189/450 (42%), Gaps = 31/450 (6%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
+ +N L+K + + +M R V P+ T N + +C G + A +
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYR 416
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
+ + G+ P +++N +I +LC ++ V AY++ + +
Sbjct: 417 SRSEIGFAPTAMSYNYLIH------------------TLCANESVEQAYDVLKGAIDRGH 458
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
T++TL + C G+ A L+ + + P ++ ALC GKV++A
Sbjct: 459 FLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALM 518
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+ + K G ++SL+ G + + A + M P Y +I +C
Sbjct: 519 INELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVC 578
Query: 247 KIKMVDDALNLFKQMHTENIT---PNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
+++ + N F + ++ V Y+ I+G +G+ A + + M G+ P
Sbjct: 579 EMESGEK--NFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITP 636
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
V + +L + KN + +A+ ++ QG Y +++ GLCK +L DA
Sbjct: 637 TVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFL 695
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY-ALFQ 422
+++ +G + Y + I LC + +DEA+ L+++ +G A ++++ A+
Sbjct: 696 EEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKS 755
Query: 423 KGDNDKAEKL------LRQMIARGLLTGLF 446
KG + ++ + +M + G L GLF
Sbjct: 756 KGVYEAWTRMRNIEDKIPEMKSLGELIGLF 785
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 156/352 (44%), Gaps = 10/352 (2%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D Y ++++L ++K D++++ + ++ R VT++ L+ FC G+L EA L
Sbjct: 216 DSFGYHVLLNALVEEKCF-DSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYL 274
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
++ ILVDALC + K +EA +L + G Y+ +
Sbjct: 275 RALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKA 334
Query: 214 NEVNKAEDIFNTMTRMELAP-DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
+N D ++ +E +V Y+ M+ L K +D ++ +M ++PN T
Sbjct: 335 GFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKT 394
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
++ + CK+G + +A EL G P ++Y+ L+ LC N V+ A ++K
Sbjct: 395 MNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAI 454
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTI----MINGLCKD 388
+G T++ L + LC G+ A+E L+I D+ I +I+ LC
Sbjct: 455 DRGHFLGGKTFSTLTNALCWKGKPDMARE----LVIAAAERDLLPKRIAGCKIISALCDV 510
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
G ++AL + +G + + +IY D A KL+ +M +G
Sbjct: 511 GKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKG 562
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 141/309 (45%), Gaps = 2/309 (0%)
Query: 135 TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 194
L+ G+ + G+ A+ M + ++ D + + +L++AL +E K ++ +V+ I
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEE-KCFDSFDVIFDQISV 245
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
VT+S L+ +C ++++AED + + A I+++ LC + +A
Sbjct: 246 RGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEA 305
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLD 313
L ++ Y+ I L K+G +++ + + ++ G V Y+S++
Sbjct: 306 TKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVF 365
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
L K +++D ++ +M +G+ PN T L CK G + +A E+++ G+
Sbjct: 366 QLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAP 425
Query: 374 DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
+Y +I+ LC + ++A ++ D G T+ + AL KG D A +L+
Sbjct: 426 TAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
Query: 434 RQMIARGLL 442
R LL
Sbjct: 486 IAAAERDLL 494
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 110/281 (39%), Gaps = 47/281 (16%)
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
+L+ GY + + A F M L D Y +++N L + K D +F Q+
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVR 246
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS-----LLDALCKNH 319
VT+S L+ CK G++ +A E + R L PN L+DALC
Sbjct: 247 GFVC-AVTHSILVKKFCKQGKLDEA-----EDYLRALLPNDPAGCGSGLGILVDALCSKR 300
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE------------------ 361
A L+ ++K G + Y I + L K G L + +
Sbjct: 301 KFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRY 360
Query: 362 ---VFQ---------------DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
VFQ +++++G + + +T + CK G DEAL L +
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE 420
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTG 444
G P A++Y +I+ L ++A +L+ I RG G
Sbjct: 421 IGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLG 461
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 102/227 (44%), Gaps = 28/227 (12%)
Query: 93 PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
P V ++ S K++ + DA + + ++ + + + Y +I G C +L +A+
Sbjct: 636 PTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHF 694
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
L +M + + P + + + + LC E K EA ++ K G + G L
Sbjct: 695 LEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFI------GNVL 748
Query: 213 VNEVNKAEDIFNTMTRM----ELAPDVQS-------YSIMINGLCKIKMVDDALNLFKQM 261
++ K++ ++ TRM + P+++S +S I+ ++K +D+ +
Sbjct: 749 LHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVI------ 802
Query: 262 HTENITP-NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
E P ++ TY+ L+ + + + DA+E+V + RG PN T
Sbjct: 803 --EKCYPLDMYTYNMLLRMIVMN-QAEDAYEMVERIARRGYVPNERT 846
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 183/410 (44%), Gaps = 57/410 (13%)
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
SV N+ GY +N +++ +A +VV S+++ CK + DA +L+ M
Sbjct: 177 SVASNVLLSGYLRAG-KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS-INPDVYTFSILVDALCKEGKV 181
+ +V+T+T +I G+ G ++ GL +M + + + T +++ A +
Sbjct: 236 ER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRY 291
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
+E + ++ + + D+ +SLM Y + + +A+ +F M D S++ +
Sbjct: 292 REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN----KDSVSWNSL 347
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
I GL + K + +A LF++M +++ V+++ +I G G IS EL M +
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEK-- 401
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI----------LLDGL- 350
+ IT+++++ A N + + A+ KM + + PN YT++ L++GL
Sbjct: 402 --DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQ 459
Query: 351 ------------------------CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 386
CK G DA ++F + ++ +Y MI+G
Sbjct: 460 IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI----SEPNIVSYNTMISGYS 515
Query: 387 KDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+G +AL L S +E +G PN VT+ ++ A G D K + M
Sbjct: 516 YNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 143/314 (45%), Gaps = 29/314 (9%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-------------KIQ 87
DLF N L++ Y LG + A +V + K D++++N++I ++
Sbjct: 309 DLFLGNSLMSMYSKLGYMGEAKAVF-GVMK---NKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 88 GKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK 147
K+ D+V ++ +I ++ L+ M K D +T+T +IS F G +
Sbjct: 365 EKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYE 420
Query: 148 EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
EA+ ++M+ K + P+ YTFS ++ A + E + ++K D+ +SL+
Sbjct: 421 EALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLV 480
Query: 208 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
YC N A IF+ ++ P++ SY+ MI+G AL LF + +
Sbjct: 481 SMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKE 536
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAIS 326
PN VT+ +L+ G + W+ M S + P Y+ ++D L ++ +D+A +
Sbjct: 537 PNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASN 596
Query: 327 LIKKM---KHQGIL 337
LI M H G+
Sbjct: 597 LISTMPCKPHSGVW 610
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 94/218 (43%), Gaps = 42/218 (19%)
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR----------- 299
+ +A +F+QM +I V++ ++I ++G++S AW++ +EM R
Sbjct: 66 LQEAEAIFRQMSNRSI----VSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121
Query: 300 ----------------GLP-PNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
+P N ++Y++++ + D A L + + +
Sbjct: 122 MIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK--FRDSVA 179
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
+LL G + G+ +A VFQ + +K +V + + M++G CK G +A +L +M
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+ N +T+ +I F+ G + L +M G
Sbjct: 236 ER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 150/339 (44%)
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
LA+ +Y+ + SL K +A + EM K I Y+ LI F ++
Sbjct: 243 LAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVIT 302
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
L + K + D +V +EG ++ V+A M K K ++++G
Sbjct: 303 EKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNG 362
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
+ +A ++ + E +Y+I IN C+++ + A LF +M +
Sbjct: 363 FSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC 422
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
VV YS+++D K+ R+SDA L+ +M RG PN+ Y+SL+D + + A + K
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWK 482
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDG 389
+MK +LP+ +YT ++ + L+ E++Q+ + +D IM+ K
Sbjct: 483 EMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTS 542
Query: 390 LFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDK 428
DE + L+ M+ G +A Y + AL G N +
Sbjct: 543 RIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQ 581
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 19 KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTI 78
K + +A A+ + + T+ I IN YC L + A + + K+G+ +
Sbjct: 365 KQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVV 424
Query: 79 TFNTIIKIQGKL-----------------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
++ I+ + GK +P++ +Y+++ID + + A ++ EM
Sbjct: 425 AYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM 484
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
++ PD V+YT++IS + +L+ V L + + D I+V K ++
Sbjct: 485 KRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRI 544
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
E +L M G + D YSS ++
Sbjct: 545 DELMRLLQDMKVEGTRLDARLYSSALNA 572
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%)
Query: 179 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 238
G++ A +L M G P +++ +++ ++ IF + ++ + D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 239 SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS 298
+I+I GLC+ ++ AL L + + PNV+T+S LI G C G+ +A++L+ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 299 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
+ P+ IT++ L+ L K V+ I L+++MK +G PN TY +L GL R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
A+E+ ++ G +Y M+ GLC+ E ++ +M ++G P + + ++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 419 ALFQKGDNDKAEKLLR 434
+ K ++D L R
Sbjct: 386 CVVSKNNDDSQANLDR 401
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 119/231 (51%)
Query: 212 LVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
L +N+A +I M P +S++ ++N L K+ D+ +F + +
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
+ LI GLC+SG + A +L++E + PNV+T+S L+ C + A L+++M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLF 391
+ + I P+ T+ IL+ GL K GR+++ ++ + + +KG + TY ++ GL
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 392 DEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
EA +MS+M G P+ ++Y+ ++ L + + + +LRQM+ G +
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 121/253 (47%), Gaps = 19/253 (7%)
Query: 43 FTFNILINCYCHL-GQITSAFSVLCNIFKRGYQPDTITFNTIIK--IQGKL--------- 90
F +N L+ Y +L G+I A +L + G P + +FN I+ + KL
Sbjct: 133 FFYN-LMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFV 191
Query: 91 ------AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
+ D + +I LC+ + A L E ++ P+V+T++ LI GFC G
Sbjct: 192 SAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKG 251
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
+ +EA LL +M + I PD TF+IL+ L K+G+V+E ++L M G +P+ TY
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQ 311
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
++ G +A+++ + M + P SY M+ GLC+ K V + + +QM
Sbjct: 312 EVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNH 371
Query: 265 NITPNVVTYSSLI 277
P + + ++
Sbjct: 372 GFVPKTLMWWKVV 384
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 98/180 (54%)
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D +IL+ LC+ G ++ A +L + +P+V+T+S L+ G+C + +A +
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS 283
M + + PD +++I+I+GL K V++ ++L ++M + PN TY ++ GL
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTY 343
R +A E++++M S G+ P+ ++Y ++ LC+ V ++++M + G +P +
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEM-LAKRISPDVVTYTTLISGFC-IVGQLKEA 149
QP +Y+ +I+ + K+ ++ + + L KR + L+ + + G++ A
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRA 151
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
+ +L M P +F+ +++ L E + K G + D + L+ G
Sbjct: 152 IEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKG 211
Query: 210 YCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPN 269
C + A + + + + P+V ++S +I G C ++A L ++M E I P+
Sbjct: 212 LCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 270 VVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIK 329
+T++ LI GL K GR+ + +L+ M +G PN TY +L L A ++
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMS 331
Query: 330 KMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+M G+ P+ +Y ++ GLC+ + + V + ++ G+
Sbjct: 332 QMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
D NILI C G + +A +L ++ +P+ +TF S
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTF------------------SP 242
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
+I C +A+ L M +RI PD +T+ LISG G+++E + LL +M +K
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKG 302
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
P+ T+ ++ L + + EAK +++ MI G +P ++Y ++ G C V + +
Sbjct: 303 CEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMD 362
Query: 221 DIFNTMTRMELAP 233
+ M P
Sbjct: 363 WVLRQMVNHGFVP 375
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
N L ++ + A+ L + ++ P++ TF+ LI +C+ G+ AF +L +
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 70 KRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPD 129
K +PDTITFN +I L K V + +L M K P+
Sbjct: 265 KERIEPDTITFN------------------ILISGLRKKGRVEEGIDLLERMKVKGCEPN 306
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLA 189
TY ++ G + EA +++QM+ + P ++ +V LC+ V E VL
Sbjct: 307 PGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLR 366
Query: 190 VMIKGGEKPDVVTYSSLMDGYCLVNEVN 217
M+ G P + + ++ C+V++ N
Sbjct: 367 QMVNHGFVPKTLMWWKVVQ--CVVSKNN 392
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
+ P ++ F+ + A L ++M+ R+ PD TFNILI+ G++
Sbjct: 232 KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEG 291
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVN-DAYNLYSE 120
+L + +G +P+ T+ V+Y + DK N +A + S+
Sbjct: 292 IDLLERMKVKGCEPNPGTYQE-------------VLYGLL------DKKRNLEAKEMMSQ 332
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
M++ + P ++Y ++ G C + E +L QMV P + +V +
Sbjct: 333 MISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCV 387
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/518 (22%), Positives = 219/518 (42%), Gaps = 113/518 (21%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
NK ++++ + A A + ++++ R + T+N +I+ Y ++ A + + K
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTV----TWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 71 RGYQPDTITFNTII----------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDA 114
R D +T+NT+I K+ ++ D ++T+I K++ + +A
Sbjct: 100 R----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEA 155
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDA 174
L+ +M + + V+++ +I+GFC G++ AV L +M +K +P LV
Sbjct: 156 LLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAG 207
Query: 175 LCKEGKVKEAKNVLAVM--IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT----- 227
L K ++ EA VL + G + V Y++L+ GY +V A +F+ +
Sbjct: 208 LIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGD 267
Query: 228 ------RMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
R +V S++ MI K+ V A LF QM + ++++++IDG
Sbjct: 268 DHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD----TISWNTMIDGYV 323
Query: 282 KSGRISDAWELVNEM-----HSRGL----------------------PPNVITYSSLLDA 314
R+ DA+ L +EM HS + + ++++S++ A
Sbjct: 324 HVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAA 383
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD---GL--------------------- 350
KN A+ L +M +G P+ +T T LL GL
Sbjct: 384 YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDV 443
Query: 351 ----------CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSK 400
+ G + +++ +F ++ +K +V T+ MI G G EAL L
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLK---REVITWNAMIGGYAFHGNASEALNLFGS 500
Query: 401 MEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
M+ NG P+ +T+ ++ A G D+A+ M++
Sbjct: 501 MKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMS 538
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 173/406 (42%), Gaps = 51/406 (12%)
Query: 42 LFTFNILINCYCHLGQITSAFSVLCNI-----------FKRGYQPDTITFNTIIKIQGKL 90
++ +N LI Y GQ+ +A + I F+ + + +++N++IK K+
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 91 AQ-------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLI 137
D + ++T+ID + DA+ L+SEM + D ++ ++
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMV 350
Query: 138 SGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK 197
SG+ VG V L K+ +++ ++ A K KEA ++ M GEK
Sbjct: 351 SGYASVGN----VELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
PD T +SL+ + + + + + + PDV ++ +I + + ++ +
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRI 465
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
F +M + V+T++++I G G S+A L M S G+ P+ IT+ S+L+A
Sbjct: 466 FDEM---KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 318 NHHVDNA-ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ------DLLIKG 370
VD A + M I P + Y+ L++ G+ ++A + D + G
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWG 582
Query: 371 YNLDV-RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEI 415
LD R Y + GL A MS++E TP + Y +
Sbjct: 583 ALLDACRIYNNV-------GLAHVAAEAMSRLEPESSTPYVLLYNM 621
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 139/288 (48%), Gaps = 36/288 (12%)
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
++ + + G + EA+++ + E + VT+++++ GY E+N+A +F+ M +
Sbjct: 47 LNQMIRSGYIAEARDIFEKL----EARNTVTWNTMISGYVKRREMNQARKLFDVMPKR-- 100
Query: 232 APDVQSYSIMINGLCK---IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
DV +++ MI+G I+ +++A LF +M + + +++++I G K+ RI +
Sbjct: 101 --DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGE 154
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A L +M R N +++S+++ C+N VD+A+ L +KM + P L+
Sbjct: 155 ALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVA 206
Query: 349 GLCKGGRLKDAQEVFQDL--LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM----- 401
GL K RL +A V L+ G V Y +I G + G + A L ++
Sbjct: 207 GLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCG 266
Query: 402 EDNGCT------PNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLT 443
+D+G N V++ +I A + GD A L QM R ++
Sbjct: 267 DDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 175/371 (47%), Gaps = 50/371 (13%)
Query: 89 KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ--- 145
KL + V ++T+I K + +N A L+ +++ KR DVVT+ T+ISG+ G
Sbjct: 65 KLEARNTVTWNTMISGYVKRREMNQARKLF-DVMPKR---DVVTWNTMISGYVSCGGIRF 120
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
L+EA L ++M + D ++++ ++ K ++ EA L + K E+ + V++S+
Sbjct: 121 LEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEA---LLLFEKMPER-NAVSWSA 172
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT-- 263
++ G+C EV+ A +F M + +P ++ GL K + + +A + Q +
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLV 228
Query: 264 ---ENITPNVVTYSSLIDGLCKSGRISDAWELVNEM-----------HSRGLPPNVITYS 309
E++ V Y++LI G + G++ A L +++ NV++++
Sbjct: 229 SGREDL---VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 310 SLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
S++ A K V +A L +MK + + ++ ++DG R++DA +F ++
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTI----SWNTMIDGYVHVSRMEDAFALFSEMP-- 339
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
N D ++ +M++G G + A K + + V++ II A + D +A
Sbjct: 340 --NRDAHSWNMMVSGYASVGNVELARHYFEKTPEK----HTVSWNSIIAAYEKNKDYKEA 393
Query: 430 EKLLRQMIARG 440
L +M G
Sbjct: 394 VDLFIRMNIEG 404
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 187/431 (43%), Gaps = 40/431 (9%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P + +N TS + + AI+L Q+ F PD ++F +++ LG +
Sbjct: 31 PELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGR 90
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKD-------------- 108
+ + + G+ N++I + GK + D + + + +C D
Sbjct: 91 KIQSLVIRSGFCASLPVNNSLIDMYGKCS--DTLSANKVFRDMCCDSRNEVTWCSLLFAY 148
Query: 109 ---KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
+ A +++ EM KR++ + +ISG G+L+ + L +M+ PD
Sbjct: 149 MNAEQFEAALDVFVEM-PKRVA---FAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 166 YTFSILVDALCKEGK-VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
YTFS L++A + V + V AVM+K G V +S++ Y ++ +D
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFY---TKLGSRDDAMR 261
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP--NVVTYSSLIDGLCK 282
+ +E+ V S++ +I+ KI + AL +F ++ P N+VT++++I G +
Sbjct: 262 ELESIEVLTQV-SWNSIIDACMKIGETEKALEVF------HLAPEKNIVTWTTMITGYGR 314
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
+G A EM G+ + Y ++L A + + + + H G Y
Sbjct: 315 NGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYV 374
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
L++ K G +K+A F D+ N D+ ++ M+ GL D+AL L M
Sbjct: 375 GNALVNLYAKCGDIKEADRAFGDIA----NKDLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 403 DNGCTPNAVTY 413
+G P+ VT+
Sbjct: 431 ASGIKPDNVTF 441
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 157/361 (43%), Gaps = 54/361 (14%)
Query: 95 VVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLN 154
+V ++ I SL K + A ++ M D V + T+++ + +G +EA+ L
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGM----PELDTVAWNTMLTSYSRLGLHQEAIALFT 59
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
Q+ PD Y+F+ ++ G VK + + +++I+ G + +SL+D Y +
Sbjct: 60 QLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCS 119
Query: 215 EVNKAEDIFNTM--------------------TRMELAPDV---------QSYSIMINGL 245
+ A +F M + E A DV +++IMI+G
Sbjct: 120 DTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGH 179
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKS-------GRISDAWELVNEMHS 298
++ L+LFK+M P+ T+SSL++ C + GR+ A L N
Sbjct: 180 AHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNA-CSADSSNVVYGRMVHAVMLKN---- 234
Query: 299 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
G V +S+L K D+A+ ++ ++ +L V ++ ++D K G +
Sbjct: 235 -GWSSAVEAKNSVLSFYTKLGSRDDAMRELESIE---VLTQV-SWNSIIDACMKIGETEK 289
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
A EVF K ++ T+T MI G ++G ++AL +M +G + Y +++
Sbjct: 290 ALEVFHLAPEK----NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLH 345
Query: 419 A 419
A
Sbjct: 346 A 346
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 173/435 (39%), Gaps = 35/435 (8%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILIN-CYCHLGQITSA 61
P +N + + +SL ++M PD +TF+ L+N C +
Sbjct: 165 PKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYG 224
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVM-------------YSTIIDSLCKD 108
V + K G+ N+++ KL D M +++IID+ K
Sbjct: 225 RMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKI 284
Query: 109 KLVNDAYNLYSEMLAKRISPD--VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
A ++ ++P+ +VT+TT+I+G+ G ++A+ +M+ ++ D +
Sbjct: 285 GETEKALEVF------HLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHF 338
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
+ ++ A + K + +I G + ++L++ Y ++ +A+ F +
Sbjct: 339 AYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI 398
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
D+ S++ M+ + D AL L+ M I P+ VT+ L+ SG +
Sbjct: 399 AN----KDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 287 SDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL---PNVYT 342
+ + M +P V + ++D + H+ A L + ++ N +
Sbjct: 455 EEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL--ATTYSSLVTDSSNNSS 512
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
+ LL + +EV + L I + ++ ++ ++ N C G + E + +M
Sbjct: 513 WETLLGACSTHWHTELGREVSKVLKIAEPSEEM-SFVLLSNLYCSTGRWKEGEDVRREMV 571
Query: 403 DNGC--TPNAVTYEI 415
+ G TP E+
Sbjct: 572 ERGMKKTPGCSWIEV 586
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 184/398 (46%), Gaps = 46/398 (11%)
Query: 25 TAISLSQQMD-----FRRVM-PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTI 78
+A+SL +Q + F +V P++ N LI + Q AF V + + G D
Sbjct: 59 SALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNF 118
Query: 79 TFNTIIKI-QGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLI 137
T+ ++K G+ P V M I+ L +S D+ LI
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLG-------------------LSSDIYVPNALI 159
Query: 138 SGFCIVGQL--KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
+ G L ++A+ L +M + D +++ ++ L K G++++A+ + M
Sbjct: 160 DCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEM---- 211
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
+ D++++++++DGY E++KA ++F M + S+S M+ G K ++ A
Sbjct: 212 PQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMAR 267
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
+F +M NVVT++ +I G + G + +A LV++M + GL + S+L A
Sbjct: 268 VMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
++ + + + +K + N Y LLD K G LK A +VF D+ K D+
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DL 381
Query: 376 RTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
++ M++GL G EA+ L S+M G P+ VT+
Sbjct: 382 VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 183/408 (44%), Gaps = 53/408 (12%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII-------------KIQ 87
D++ N LI+CY G + ++ +F++ + DT+++N+++ ++
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAM--KLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 88 GKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI--------------------- 126
++ Q D++ ++T++D + + ++ A+ L+ +M +
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 127 --------SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKE 178
+ +VVT+T +I+G+ G LKEA L++QMV + D ++ A +
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 179 GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSY 238
G + + +++ + + ++L+D Y + KA D+FN + + +L S+
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SW 384
Query: 239 SIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS 298
+ M++GL +A+ LF +M E I P+ VT+ +++ +G I + + M
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Query: 299 -RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLK 357
L P V Y L+D L + + AI +++ M + PNV + LL G C+
Sbjct: 445 VYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME---PNVVIWGALL-GACRMHNEV 500
Query: 358 DAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
D + D L+K D Y+++ N ++ + SKM+ G
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 548
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 153/316 (48%), Gaps = 20/316 (6%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+N L+++++ + + D+ LIS + Q AV + NQ+ P+V+ +
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ----EPNVHLCNS 87
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
L+ A + + +A V + M + G D TY L+ + + + + N + ++
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 231 LAPDVQSYSIMIN--GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
L+ D+ + +I+ C V DA+ LF++M + V+++S++ GL K+G + D
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRD 203
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A L +EM R L I+++++LD + + A L +KM + N +++ ++
Sbjct: 204 ARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVM 255
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
G K G ++ A+ +F + + N V T+TI+I G + GL EA L+ +M +G
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKN--VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 409 NAVTYEIIIYALFQKG 424
+A I+ A + G
Sbjct: 314 DAAAVISILAACTESG 329
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNL 257
D V Y+ ++ + ++N A+ + M + L PDV +Y+ MING C +DDA L
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG----LPPNVITYSSLLD 313
K+M + N VTYS +++G+CKSG + A EL+ EM + PN +TY+ ++
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK------------------GG- 354
A C+ V+ A+ ++ +M ++G +PN T +L+ G+ + GG
Sbjct: 283 AFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGV 342
Query: 355 -----------------RLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
R ++A+++F+ +L++G D + + LC + + L
Sbjct: 343 SLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLL 402
Query: 398 MSKME--DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++E D T ++ + +++ L Q+G++ +A KL + M+ + +
Sbjct: 403 YQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKM 448
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 23/255 (9%)
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
++K KPD++ Y V E + E+ F +V++ I++ + +
Sbjct: 104 ILKIRAKPDLIKY---------VIESYRKEECF---------VNVKTMRIVLTLCNQANL 145
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
D+AL + ++ N+ + V Y+ +I G ++ A L+ EM GL P+VITY+S
Sbjct: 146 ADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTS 205
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK- 369
+++ C +D+A L K+M + N TY+ +L+G+CK G ++ A E+ ++ +
Sbjct: 206 MINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKED 265
Query: 370 GYNL---DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
G L + TYT++I C+ +EAL ++ +M + GC PN VT ++I + + ++
Sbjct: 266 GGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDED 325
Query: 427 DKA-EKLLRQMIARG 440
KA KL+ +++ G
Sbjct: 326 VKALSKLIDKLVKLG 340
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 183/407 (44%), Gaps = 18/407 (4%)
Query: 35 FRRVMPDLFTFNILINCYCHLGQITS------AFSVLCNIFKRGYQPDTITFNTIIKIQG 88
RR P+ F + + G ++S ++ C+I K +PD I + +I+
Sbjct: 67 LRRCDPNQFQSGLRF--FIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKY--VIESYR 122
Query: 89 KLAQPDVVMYSTIIDSLC-KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK 147
K V I+ +LC + L ++A + + + D V Y +I F G L
Sbjct: 123 KEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLN 182
Query: 148 EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
A L+ +M + PDV T++ +++ C GK+ +A + M K + VTYS ++
Sbjct: 183 IADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRIL 242
Query: 208 DGYCLVNEVNKAEDIFNTMTRME----LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
+G C ++ +A ++ M + + ++P+ +Y+++I C+ + V++AL + +M
Sbjct: 243 EGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGN 302
Query: 264 ENITPNVVTYSSLIDGLCKSGRISDAW-ELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
PN VT LI G+ ++ A +L++++ G +SS +L + +
Sbjct: 303 RGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWE 362
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN--LDVRTYTI 380
A + + M +G+ P+ + + LC R D ++Q++ K +D + +
Sbjct: 363 EAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAV 422
Query: 381 MINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDND 427
++ GLC+ G EA L M D E II AL + GD D
Sbjct: 423 LLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDED 469
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 25/301 (8%)
Query: 29 LSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQG 88
L ++MD + PD+ T+ +IN YC+ G+I A+ + + K +++T
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVT--------- 237
Query: 89 KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR----ISPDVVTYTTLISGFCIVG 144
YS I++ +CK + A L +EM + ISP+ VTYT +I FC
Sbjct: 238 ---------YSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKR 288
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK-VKEAKNVLAVMIKGGEKPDVVTY 203
+++EA+ +L++M + P+ T +L+ + + + VK ++ ++K G +
Sbjct: 289 RVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECF 348
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHT 263
SS + +AE IF M + PD + S + LC ++ D L++++
Sbjct: 349 SSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEK 408
Query: 264 ENITPNVVT--YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+++ + + ++ L+ GLC+ G +A +L M + + V +++AL K
Sbjct: 409 KDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDE 468
Query: 322 D 322
D
Sbjct: 469 D 469
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 280 LCKSGRISD-AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
LC ++D A ++ + + + + Y+ ++ ++ A LIK+M G+ P
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP 198
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
+V TYT +++G C G++ DA + +++ L+ TY+ ++ G+CK G + AL L+
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 399 SKME--DNG--CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
++ME D G +PNAVTY ++I A +K ++A +L +M RG +
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 180/371 (48%), Gaps = 32/371 (8%)
Query: 84 IKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV 143
+++ K P+ + + +I + + +A ++ ++ R P T L+ ++
Sbjct: 98 LEVSEKFDTPESI-FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALL---LVL 153
Query: 144 GQLKEAVGLLNQMVLKS----INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
+ ++++ L+ ++++K+ + + TF IL+DALC+ G+V A ++ M + D
Sbjct: 154 VRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVD 213
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRME------LAPDVQSYSIMINGLCKIKMVDD 253
YS L+ C +K F+ + +E +P ++ Y++++ L + +
Sbjct: 214 PRLYSRLLSSVC----KHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKE 269
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD 313
+++ QM + + P++V Y+ ++ G+ A +L +E+ GL P+V TY+ ++
Sbjct: 270 VVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYIN 329
Query: 314 ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL 373
LCK + ++ A+ ++ M G PNV TY IL+ L K G L A+ +++++ G N
Sbjct: 330 GLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNR 389
Query: 374 DVRTYTIMING-------LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDN 426
+ T+ IMI+ +C GL +EA + + E +I L +KG
Sbjct: 390 NSHTFDIMISAYIEVDEVVCAHGLLEEAFNM-------NVFVKSSRIEEVISRLCEKGLM 442
Query: 427 DKAEKLLRQMI 437
D+A +LL ++
Sbjct: 443 DQAVELLAHLV 453
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 161/353 (45%), Gaps = 37/353 (10%)
Query: 92 QPDVVMYSTIIDSLCKD-KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV 150
+P Y +I +L K +L N + LY ++++ + +I+ + G+++EA+
Sbjct: 69 EPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAI 128
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 210
+ ++ P YT + L L V+++ + ++V
Sbjct: 129 EVFFKIPNFRCVPSAYTLNAL----------------LLVLVRKRQSLELVP-------- 164
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
+I RM + + ++ I+I+ LC+I VD A L + M +++ +
Sbjct: 165 ----------EILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDP 214
Query: 271 VTYSSLIDGLCKSGRIS--DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
YS L+ +CK S D + ++ P + Y+ ++ L + +S++
Sbjct: 215 RLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVL 274
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
+MK + P++ YTI+L G+ A ++F +LL+ G DV TY + INGLCK
Sbjct: 275 NQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQ 334
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ AL +MS M G PN VTY I+I AL + GD +A+ L ++M G+
Sbjct: 335 NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 157/343 (45%), Gaps = 20/343 (5%)
Query: 45 FNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ-----PDVVM-- 97
F +I Y G+I A V I P T N ++ + + Q P++++
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKA 170
Query: 98 -----------YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQL 146
+ +ID+LC+ V+ A L M + D Y+ L+S C
Sbjct: 171 CRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDS 230
Query: 147 K--EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
+ +G L + +P + +++++ L + G+ KE +VL M +PD+V Y+
Sbjct: 231 SCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
++ G + KA+ +F+ + + LAPDV +Y++ INGLCK ++ AL + M+
Sbjct: 291 IVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKL 350
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
PNVVTY+ LI L K+G +S A L EM + G+ N T+ ++ A + V A
Sbjct: 351 GSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCA 410
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLL 367
L+++ + + ++ LC+ G + A E+ L+
Sbjct: 411 HGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 132/290 (45%), Gaps = 20/290 (6%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIID 103
TF ILI+ C +G++ A ++ R D++ D +YS ++
Sbjct: 181 TFGILIDALCRIGEVDCATELV-----RYMSQDSVIV-------------DPRLYSRLLS 222
Query: 104 SLC--KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI 161
S+C KD D ++ R SP + YT ++ G+ KE V +LNQM +
Sbjct: 223 SVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRV 282
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAED 221
PD+ ++I++ + + +A + ++ G PDV TY+ ++G C N++ A
Sbjct: 283 EPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALK 342
Query: 222 IFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLC 281
+ ++M ++ P+V +Y+I+I L K + A L+K+M T + N T+ +I
Sbjct: 343 MMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYI 402
Query: 282 KSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
+ + A L+ E + + ++ LC+ +D A+ L+ +
Sbjct: 403 EVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 2 RPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
R P ++ + ++ + Y A L ++ + PD++T+N+ IN C I A
Sbjct: 281 RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGA 340
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
++ ++ K G +P+ +T+N +IK +L K ++ A L+ EM
Sbjct: 341 LKMMSSMNKLGSEPNVVTYNILIK------------------ALVKAGDLSRAKTLWKEM 382
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
++ + T+ +IS + V ++ A GLL + ++ ++ LC++G +
Sbjct: 383 ETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLM 442
Query: 182 KEAKNVLAVMI 192
+A +LA ++
Sbjct: 443 DQAVELLAHLV 453
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
+++D +A +M K P + L+ C + KAE+ F ++
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKK 252
Query: 230 ELAPDVQSYSIMINGLCKIKM-VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
DV+ +++++NG C I V +A ++++M ITPN +YS +I K G + D
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
+ L +EM RGL P + Y+SL+ L + D A+ L+KK+ +G+ P+ TY ++
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
LC+ G+L A+ V ++ + + V T+ + + F++ L ++ +M+ + P
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGP 428
Query: 409 NAVTYEIIIYALFQKGDNDKAEKLLRQM 436
T+ +I+ LF+ + A K+ +M
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEM 456
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 24/271 (8%)
Query: 36 RRVMP-DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA-QP 93
+++ P D+ FN+++N +C NI+ D I + G P
Sbjct: 251 KKLFPVDVEGFNVILNGWC-------------NIW-----TDVTEAKRIWREMGNYCITP 292
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+ YS +I K + D+ LY EM + ++P + Y +L+ EA+ L+
Sbjct: 293 NKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLM 352
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
++ + + PD T++ ++ LC+ GK+ A+NVLA MI P V T+ + ++ V
Sbjct: 353 KKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEA---V 409
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
N K ++ M +L P +++ +++ L K K ++AL ++ +M I N Y
Sbjct: 410 N-FEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALY 468
Query: 274 SSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
+ I GL G + A E+ +EM S+G N
Sbjct: 469 LATIQGLLSCGWLEKAREIYSEMKSKGFVGN 499
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 134/279 (48%), Gaps = 14/279 (5%)
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLA-KRISP-DVVTYTTLISGFC-IVGQLKEAVGLLN 154
+ ++ +LC+ + A MLA K++ P DV + +++G+C I + EA +
Sbjct: 227 FQGLLCALCRHGHIEKAEEF---MLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWR 283
Query: 155 QMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVN 214
+M I P+ ++S ++ K G + ++ + M K G P + Y+SL+ Y L
Sbjct: 284 EMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV--YVLTR 341
Query: 215 E--VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVT 272
E ++A + + L PD +Y+ MI LC+ +D A N+ M +EN++P V T
Sbjct: 342 EDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDT 401
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
+ + ++ + E++ +M L P T+ +L L K +NA+ + +M
Sbjct: 402 FHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMD 457
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
I+ N Y + GL G L+ A+E++ ++ KG+
Sbjct: 458 RFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 145/313 (46%), Gaps = 9/313 (2%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIID 103
TF+I+ + + H + +LC + + G+ F K KL DV ++ I++
Sbjct: 211 TFDIM-DKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASK---KLFPVDVEGFNVILN 266
Query: 104 SLCKDKL-VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSIN 162
C V +A ++ EM I+P+ +Y+ +IS F VG L +++ L ++M + +
Sbjct: 267 GWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLA 326
Query: 163 PDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDI 222
P + ++ LV L +E EA ++ + + G KPD VTY+S++ C +++ A ++
Sbjct: 327 PGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNV 386
Query: 223 FNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK 282
TM L+P V ++ + + + L + QM ++ P T+ ++ L K
Sbjct: 387 LATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFK 442
Query: 283 SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYT 342
+ +A ++ EM + N Y + + L ++ A + +MK +G + N
Sbjct: 443 GKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPML 502
Query: 343 YTILLDGLCKGGR 355
+L + KG R
Sbjct: 503 QKLLEEQKVKGVR 515
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%), Gaps = 17/236 (7%)
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQ-SYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
+CL+ D+FN ++ D + + +M++ A+ F M T
Sbjct: 174 AWCLIR------DMFN------VSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHT 221
Query: 268 PNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PPNVITYSSLLDALCK-NHHVDNAI 325
P + L+ LC+ G I A E + + S+ L P +V ++ +L+ C V A
Sbjct: 222 PYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAK 279
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGL 385
+ ++M + I PN +Y+ ++ K G L D+ ++ ++ +G + Y ++ L
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 386 CKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
++ FDEA+ LM K+ + G P++VTY +I L + G D A +L MI+ L
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 182/399 (45%), Gaps = 29/399 (7%)
Query: 46 NILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSL 105
N +I+ + G ++ A + I + G + + T T+I + G+ +
Sbjct: 639 NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHK------------- 685
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
+ +A LY + +P ++I + G L++A GL + K +P
Sbjct: 686 -----LKEAKRLYLAA-GESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGA 739
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
T SILV+AL GK +EA+++ ++ + D V Y++L+ ++ A +I+
Sbjct: 740 VTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYER 799
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
M + +Q+Y+ MI+ + +D A+ +F + + Y+++I K G+
Sbjct: 800 MHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK 859
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLD--ALCKNHH-VDNAISLIKKMKHQGILPNVYT 342
+S+A L +EM +G+ P +Y+ ++ A + HH VD L++ M+ G ++ T
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDE---LLQAMERNGRCTDLST 916
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
Y L+ + + +A++ + KG L ++ +++ L K G+ +EA KM
Sbjct: 917 YLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMS 976
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKA----EKLLRQMI 437
+ G +P++ I+ GD +K EK++R +
Sbjct: 977 EAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSV 1015
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 198/475 (41%), Gaps = 67/475 (14%)
Query: 26 AISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII- 84
A+ + + M R + F + +++ CY + + A + K G PD + N ++
Sbjct: 452 ALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLN 510
Query: 85 ---------KIQGKLAQP-------DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
K +G + Q D+ +Y T + CK+ +V +A +L +M +
Sbjct: 511 LYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVK 570
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
D TL IV + + +LN L DV ++++ KEG + E K +L
Sbjct: 571 DNRFVQTLAESMHIVNKHDKHEAVLNVSQL-----DVMALGLMLNLRLKEGNLNETKAIL 625
Query: 189 AVMIK---GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
+M K G + V S + +G +V+KAE I + + R+ L + ++ + +I
Sbjct: 626 NLMFKTDLGSSAVNRVISSFVREG-----DVSKAEMIADIIIRLGLRMEEETIATLIAVY 680
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
+ + +A L+ E+ TP S+ID + G + DA+ L E +G P
Sbjct: 681 GRQHKLKEAKRLYLAA-GESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGA 739
Query: 306 ITYSSLLDALC-----------------KNHHVDN------------------AISLIKK 330
+T S L++AL KN +D A + ++
Sbjct: 740 VTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYER 799
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
M G+ ++ TY ++ +G +L A E+F + G LD + YT MI K G
Sbjct: 800 MHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK 859
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
EAL+L S+M+ G P +Y +++ + + ++LL+ M G T L
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDL 914
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 183/425 (43%), Gaps = 24/425 (5%)
Query: 36 RRVMPDLFTFNI-----LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNT------II 84
+++M D F+I + YC G + A ++ + + D T I+
Sbjct: 526 KQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIV 585
Query: 85 KIQGK------LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
K ++Q DV+ +++ K+ +N+ + + M + V +IS
Sbjct: 586 NKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVN--RVIS 643
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK- 197
F G + +A + + ++ + + T + L+ ++ K+KEAK + + GE
Sbjct: 644 SFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---LAAGESK 700
Query: 198 -PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN 256
P S++D Y + A +F P + SI++N L +A +
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 257 LFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 316
+ + +NI + V Y++LI + ++G++ A E+ MH+ G+P ++ TY++++
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 317 KNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 376
+ +D AI + + G+ + YT ++ KGG++ +A +F ++ KG
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 377 TYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+Y +M+ L E L+ ME NG + TY +I + +AEK + +
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 437 IARGL 441
+G+
Sbjct: 941 KEKGI 945
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 178/419 (42%), Gaps = 21/419 (5%)
Query: 32 QMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLA 91
Q+ +R P + + I++ Y +G+I A + + G +PD + T++ +
Sbjct: 181 QLSYR---PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWG 237
Query: 92 QPDVVM-----------------YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYT 134
+ ++ Y+ ++ SL K +L+ EM+ + + P+ TYT
Sbjct: 238 RHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYT 297
Query: 135 TLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKG 194
++S + G +EA+ +M P+ T+S ++ K G ++A + M
Sbjct: 298 LVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQ 357
Query: 195 GEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDA 254
G P T ++++ Y KA +F M R ++ D ++I K+ + DA
Sbjct: 358 GIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDA 417
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
++F++ N+ + TY ++ SG + A +++ M +R +P + Y +L
Sbjct: 418 QSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQC 477
Query: 315 LCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
K +VD A + + G LP+ + +L+ + + A+ + +++ + D
Sbjct: 478 YAKIQNVDCAEEAFRALSKTG-LPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFD 536
Query: 375 VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
+ Y + CK+G+ EA L+ KM + + + ++ +DK E +L
Sbjct: 537 IELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVL 595
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 13/316 (4%)
Query: 140 FCIVGQLKEAVG------LLNQMVLK-SINPDVYTFSILVDALCKEGKVKEAKNVLAVMI 192
C+V LKE G + M L+ S P V ++I++ + GK+K A+ M+
Sbjct: 158 MCVV--LKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEML 215
Query: 193 KGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVD 252
+ G +PD V +++ Y + + + + Y+ M++ L K
Sbjct: 216 EVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHG 275
Query: 253 DALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLL 312
++L+ +M E + PN TY+ ++ K G +A + EM S G P +TYSS++
Sbjct: 276 KVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
Query: 313 DALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 372
K + AI L + M+ QGI+P+ YT +L K A +F D+
Sbjct: 336 SLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIP 395
Query: 373 LD--VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
D +R I I G K GLF +A ++ + E + TY + G+ KA
Sbjct: 396 ADEVIRGLIIRIYG--KLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKAL 453
Query: 431 KLLRQMIARGLLTGLF 446
++ M R + F
Sbjct: 454 DVIEMMKTRDIPLSRF 469
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 181/449 (40%), Gaps = 60/449 (13%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+N +SL K + I L +M V P+ FT+ ++++ Y G A +
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 70 KRGYQPDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVN 112
G+ P+ +T++++I + K P +T++ K +
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
A +L+++M +I D V +I + +G +A + + ++ D T+ +
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMS 440
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
G V +A +V+ +M Y ++ Y + V+ AE+ F +++ L
Sbjct: 441 QVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL- 499
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
PD S + M+N ++ + + A KQ+ + + ++ Y + + CK G +++A +L
Sbjct: 500 PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDL 559
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
+ +M + + + L ++ H+ N K KH+ +L NV
Sbjct: 560 IVKMGREAR----VKDNRFVQTLAESMHIVN-----KHDKHEAVL-NV------------ 597
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
LDV +M+N K+G +E A+++ M +AV
Sbjct: 598 ------------------SQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVN 639
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+I + ++GD KAE + +I GL
Sbjct: 640 R--VISSFVREGDVSKAEMIADIIIRLGL 666
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 115/263 (43%), Gaps = 19/263 (7%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI---QGKLAQP--- 93
P T +IL+N + G+ A + ++ + DT+ +NT+IK GKL
Sbjct: 737 PGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEI 796
Query: 94 -----------DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
+ Y+T+I + ++ A ++S + D YT +I +
Sbjct: 797 YERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGK 856
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV-KEAKNVLAVMIKGGEKPDVV 201
G++ EA+ L ++M K I P +++++V +C ++ E +L M + G D+
Sbjct: 857 GGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLS 915
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
TY +L+ Y ++ +AE + + +S +++ L K M+++A + +M
Sbjct: 916 TYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKM 975
Query: 262 HTENITPNVVTYSSLIDGLCKSG 284
I+P+ +++ G G
Sbjct: 976 SEAGISPDSACKRTILKGYMTCG 998
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 139/337 (41%), Gaps = 19/337 (5%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI---QGKLAQP--- 93
P +I+ Y G + A+ + ++G P +T + ++ +GK +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 94 -----------DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
D V Y+T+I ++ + + A +Y M + + TY T+IS +
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
QL +A+ + + + D ++ ++ K GK+ EA ++ + M K G KP +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 203 YSSLMDGYCLVNEVN-KAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
Y+ +M C + ++ + +++ M R D+ +Y +I + +A +
Sbjct: 882 YN-MMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+ I + +SSL+ L K+G + +A +M G+ P+ ++L
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDA 1000
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
+ I +KM + + + +++ D G+ +D
Sbjct: 1001 EKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQD 1037
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 17/244 (6%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
+ +N ++++ A + ++M V + T+N +I+ Y Q+ A + N
Sbjct: 775 VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN 834
Query: 68 IFKRGYQPDTITFNTII-----------------KIQGKLAQPDVVMYSTIIDSLCKDKL 110
+ G D + +I ++Q K +P Y+ ++ +L
Sbjct: 835 ARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRL 894
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
++ L M D+ TY TLI + Q EA + + K I FS
Sbjct: 895 HHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSS 954
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
L+ AL K G ++EA+ M + G PD +++ GY + K + M R
Sbjct: 955 LLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSS 1014
Query: 231 LAPD 234
+ D
Sbjct: 1015 VEDD 1018
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 205/488 (42%), Gaps = 71/488 (14%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRR----VMPDLFTFNILINCYCHLGQIT 59
+P I +N ++++ + L +QM R PD FT+ +L L +
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQM-LRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 60 SAFSVLCNIFKRGYQPDTITFNTII-------------KIQGKLAQPDVVMYSTIIDSLC 106
+L ++ K + + N I K+ + D+V ++ +I+
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 107 KDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVY 166
K A +Y M ++ + PD VT L+S ++G L + + +
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 167 TFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
+ L+D K G + EA+ + + EK +V++++++ GY ++ + +F+ M
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNL----EKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP------------------ 268
DV ++ MI G + K DAL LF++M T N P
Sbjct: 350 EE----KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405
Query: 269 -----------------NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSL 311
NV +SL+D K G IS+A + + + +R N +TY+++
Sbjct: 406 DVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAI 461
Query: 312 LDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGY 371
+ L + AIS +M GI P+ T+ LL C GG ++ ++ F + + +
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR-F 520
Query: 372 NLD--VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
NL+ ++ Y+IM++ L + GL +EA LM M +A + +++ G+ +
Sbjct: 521 NLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP---MEADAAVWGALLFGCRMHGNVELG 577
Query: 430 EKLLRQMI 437
EK ++++
Sbjct: 578 EKAAKKLL 585
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 189/418 (45%), Gaps = 32/418 (7%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRG---YQPDTITFNTIIKIQGKLAQPDVV 96
P++F++N+ I + +F + + + G +PD T+ + K+ L
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS-- 173
Query: 97 MYSTIIDSLCKDKL--VNDAYNLYSEMLA--------KRI---SP--DVVTYTTLISGFC 141
+ I+ + K +L V+ +N M A +++ SP D+V++ LI+G+
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 142 IVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
+G+ ++A+ + M + + PD T LV + G + K + + G + +
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
++LMD + ++++A IF+ + + + S++ MI+G + ++D + LF M
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIV----SWTTMISGYARCGLLDVSRKLFDDM 349
Query: 262 HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
++ VV ++++I G ++ R DA L EM + P+ IT L A + +
Sbjct: 350 EEKD----VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIM 381
D I + + ++ + NV T L+D K G + +A VF + + + TYT +
Sbjct: 406 DVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAI 461
Query: 382 INGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
I GL G A++ ++M D G P+ +T+ ++ A G QM +R
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 116/275 (42%), Gaps = 20/275 (7%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ +N V+ K A++L Q+M PD T ++ LG + +
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 67 NIFKRGYQPDTITFNTIIKIQGK-------------LAQPDVVMYSTIIDSLCKDKLVND 113
I K + +++ + K + + + Y+ II L +
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473
Query: 114 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTFSILV 172
A + ++EM+ I+PD +T+ L+S C G ++ +QM + ++NP + +SI+V
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 533
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
D L + G ++EA ++ M + D + +L+ G + V E + +EL
Sbjct: 534 DLLGRAGLLEEADRLMESMPM---EADAAVWGALLFGCRMHGNVELGEKAAKKL--LELD 588
Query: 233 PDVQSYSIMINGL-CKIKMVDDALNLFKQMHTENI 266
P ++++G+ + M +DA + M+ +
Sbjct: 589 PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGV 623
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 178/415 (42%), Gaps = 24/415 (5%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
PP +N +++ +IS+ QM ++PD T+ L+ L S+
Sbjct: 71 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 130
Query: 65 LCNIFKRGYQPDTITFNTIIKIQG-------------KLAQPDVVMYSTIIDSLCKDKLV 111
C++ K G + D NT+I + G ++ ++V +++I+D+ K V
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDV 190
Query: 112 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV-LKSINPDVYTFSI 170
A ++ EM + DVVT++++I G+ G+ +A+ + +QM+ + S + T
Sbjct: 191 VSARLVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVS 246
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
++ A G + K V ++ V+ +SL+D Y + A +F + E
Sbjct: 247 VICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
D ++ +I GL + ++L LF +M I P+ +T+ L+ G + +AW
Sbjct: 307 --TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAW 364
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
+ G P Y+ ++D L + V +A I +M I P LL+G
Sbjct: 365 HFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP---IKPTGSMLGALLNGC 421
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
G L+ A+ V + L+ + D R Y + N + F A ++ ME G
Sbjct: 422 INHGNLELAETVGKKLIELQPHNDGR-YVGLANVYAINKQFRAARSMREAMEKKG 475
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 162/388 (41%), Gaps = 47/388 (12%)
Query: 85 KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
K KL+ P ++ +I + + ++Y +ML + PD +TY L+ +
Sbjct: 63 KFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLS 122
Query: 145 QLKEAVGLLNQMVLKSINPDVY-------------------------------TFSILVD 173
K L +V + D++ T++ ++D
Sbjct: 123 NRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILD 182
Query: 174 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
A K G V A+ V M + DVVT+SS++DGY E NKA +IF+ M RM
Sbjct: 183 AYAKSGDVVSARLVFDEM----SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRM--GS 236
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTE----NITPNVVTYSSLIDGLCKSGRISDA 289
+ M++ +C + ALN K +H ++ V+ +SLID K G I DA
Sbjct: 237 SKANEVTMVSVICACAHL-GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
W + + + + +++++ L + + ++ L KM+ I P+ T+ LL
Sbjct: 296 WSVFYRASVK--ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAA 353
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
GG +K+A F+ L G Y M++ L + GL +A +S+M P
Sbjct: 354 CSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP---IKPT 410
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMI 437
++ G+ + AE + +++I
Sbjct: 411 GSMLGALLNGCINHGNLELAETVGKKLI 438
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 195/436 (44%), Gaps = 37/436 (8%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCH-LGQITSA 61
P P ++ +N K + L M V PD TF L+N G +
Sbjct: 95 PEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACG 154
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
+ C++ K G + N ++K MYS LC L++ A ++
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVK-----------MYS-----LCG--LMDMARGVFD-- 194
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+R DV ++ +ISG+ + + +E++ LL +M ++P T +LV + C + K
Sbjct: 195 --RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTL-LLVLSACSKVKD 251
Query: 182 KE-AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
K+ K V + + +P + ++L++ Y E++ A IF +M A DV S++
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK----ARDVISWTS 307
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
++ G + + A F QM + ++++ +IDG ++G +++ E+ EM S G
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAG 363
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+ P+ T S+L A ++ + + I +V L+D K G + AQ
Sbjct: 364 MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
+VF D+ + D T+T M+ GL +G EA+ + +M+D P+ +TY ++ A
Sbjct: 424 KVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC 479
Query: 421 FQKGDNDKAEKLLRQM 436
G D+A K +M
Sbjct: 480 NHSGMVDQARKFFAKM 495
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 159/322 (49%), Gaps = 19/322 (5%)
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
V+ AY L+ K PDVV + +I G+ V E V L M+ + + PD +TF
Sbjct: 84 VSYAYKLF----VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPF 139
Query: 171 LVDALCKE-GKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
L++ L ++ G + K + ++K G ++ ++L+ Y L ++ A +F+ +
Sbjct: 140 LLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK- 198
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
DV S+++MI+G ++K ++++ L +M ++P VT L+ C + D
Sbjct: 199 ---EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTL-LLVLSACSKVKDKDL 254
Query: 290 WELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
+ V+E S P++ ++L++A +D A+ + + MK + +V ++T ++
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVK 310
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
G + G LK A+ F + ++ D ++TIMI+G + G F+E+L + +M+ G P
Sbjct: 311 GYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP 366
Query: 409 NAVTYEIIIYALFQKGDNDKAE 430
+ T ++ A G + E
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGE 388
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 169/366 (46%), Gaps = 24/366 (6%)
Query: 16 SLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP 75
+LVK + +++ + RR D+F++N++I+ Y + + + +L + + P
Sbjct: 175 ALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSP 234
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLCK--------DKLVNDAYNLYSEM-LAKRI 126
++T ++ K+ D+ S CK + LVN AY EM +A RI
Sbjct: 235 TSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVN-AYAACGEMDIAVRI 293
Query: 127 -----SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ DV+++T+++ G+ G LK A +QM ++ D +++I++D + G
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCF 349
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
E+ + M G PD T S++ + + E I + + ++ DV + +
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNAL 409
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
I+ K + A +F M + T+++++ GL +G+ +A ++ +M +
Sbjct: 410 IDMYFKCGCSEKAQKVFHDMDQRD----KFTWTAMVVGLANNGQGQEAIKVFFQMQDMSI 465
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKH-QGILPNVYTYTILLDGLCKGGRLKDAQ 360
P+ ITY +L A + VD A KM+ I P++ Y ++D L + G +K+A
Sbjct: 466 QPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAY 525
Query: 361 EVFQDL 366
E+ + +
Sbjct: 526 EILRKM 531
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 48/234 (20%)
Query: 237 SYSIMINGLCKIKMVDDALNLFKQMHTENIT----PNVVTYSSLIDGLCK--SGRISDAW 290
S I I G+CK + FKQ+H+++IT PN L C G +S A+
Sbjct: 35 SRFISILGVCK------TTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAY 88
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
+L ++ P+V+ +++++ K + L M +G+ P+ +T+ LL+GL
Sbjct: 89 KLFVKIPE----PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL 144
Query: 351 CK-GGRLKDAQEVF--------------QDLLIKGYNL-----------------DVRTY 378
+ GG L +++ Q+ L+K Y+L DV ++
Sbjct: 145 KRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSW 204
Query: 379 TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKL 432
+MI+G + ++E++ L+ +ME N +P +VT +++ A + D D +++
Sbjct: 205 NLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 203/446 (45%), Gaps = 57/446 (12%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDV--VMY 98
D+F + +++ + + A + G QP+ T++ I+ + + D ++
Sbjct: 289 DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIH 348
Query: 99 STIIDSLCKDK--LVNDAYNLY-----SEMLAKRI-----SPDVVTYTTLISGFCIVGQL 146
S I +D + N ++Y SE+ A R+ SP+VV++TTLI G G +
Sbjct: 349 SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFV 408
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
++ GLL +MV + + P+V T S ++ A K V+ + A +++ ++V +SL
Sbjct: 409 QDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSL 468
Query: 207 MDGYCLVNEVNKAEDI------------------FNTMTRMELAPDVQSY---------S 239
+D Y +V+ A ++ FN + + E+A V +Y
Sbjct: 469 VDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQ 528
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPN----VVTYSSLIDGLCKSGRISDAWELVNE 295
+ + G AL K +H ++ +SL+D K G + DA ++ E
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE 588
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
+ + P+V++++ L+ L N + +A+S ++M+ + P+ T+ ILL C GR
Sbjct: 589 IAT----PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA-CSNGR 643
Query: 356 LKD-AQEVFQDLLIKGYNLD--VRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVT 412
L D E FQ ++ K YN++ V Y ++ L + G +EA ++ M PNA+
Sbjct: 644 LTDLGLEYFQ-VMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAMI 699
Query: 413 YEIIIYALFQKGDNDKAEKLLRQMIA 438
++ ++ A +G+ E + + +A
Sbjct: 700 FKTLLRACRYRGNLSLGEDMANKGLA 725
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 199/448 (44%), Gaps = 62/448 (13%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
+ + ++ K++ +A+A+SL ++M P+ FTF+ ++ L I+ V
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQ-------------PDVVMYSTIIDSLCKDKLVND 113
++ K G++ +++ +++ + K Q D + ++ +I SL + +
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 114 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVD 173
A YSEM+ + P+ T+ L+ +G L+ + + ++++ I +V + LVD
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 174 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAP 233
+ K+++A VL GE+ DV ++S++ G+ +A F M + L P
Sbjct: 268 FYSQFSKMEDAVRVLN---SSGEQ-DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 234 DVQSYSIMINGLCKIKMVDDALNLFKQMHTENI--------------------------- 266
+ +YS +++ ++ +L+ KQ+H++ I
Sbjct: 324 NNFTYSAILSLCSAVR----SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE 379
Query: 267 ---------TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
+PNVV++++LI GL G + D + L+ EM R + PNV+T S +L A K
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
HV + + + + + + L+D ++ A V + + + D T
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNIT 495
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNG 405
YT ++ + G + AL++++ M +G
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDG 523
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
+A L+ EM + V +T +IS F + A+ L +M+ +P+ +TFS +V
Sbjct: 76 NARKLFDEMSHR----TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVV 131
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
+ + V +IK G + + V SSL D Y + +A ++F+++
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN---- 187
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
D S+++MI+ L + +AL + +M + PN T+ L+ G E
Sbjct: 188 ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-----LEF 242
Query: 293 VNEMHS----RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
+HS RG+P NV+ +SL+D + +++A+ ++ Q +V+ +T ++
Sbjct: 243 GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ----DVFLWTSVVS 298
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC 386
G + R K+A F ++ G + TY+ +++ LC
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS-LC 335
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
+ N L + + D + +++ E V ++ +I KS + A L EM + G
Sbjct: 60 LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG 119
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
PN T+SS++ + + + + G N + L D K G+ K+A
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTY 413
E+F L N D ++T+MI+ L + EAL S+M G PN T+
Sbjct: 180 ELFSSL----QNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 135/270 (50%), Gaps = 18/270 (6%)
Query: 102 IDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI 161
+++LCK+KLV +A ++ + L + I PD +TY T+I GFC VG L EA L N M+ +
Sbjct: 188 VETLCKEKLVEEAKFVFIK-LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGF 246
Query: 162 NPDVYTFSILVDALCKEGKVKEAKNVLAVMI-KGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
+ D+ +++ L K+ + EA V VM+ K G D Y ++D C ++ A
Sbjct: 247 DVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMAR 306
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+F+ M + D +++ +I GL + V +A L + + EN P++ Y LI GL
Sbjct: 307 KVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGV--EN--PDISIYHGLIKGL 362
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNV 340
K R S+A E+ +M RG P + TY LL + H + + +G P V
Sbjct: 363 VKIKRASEATEVFRKMIQRGCEPIMHTYLMLL----QGH--------LGRRGRKGPDPLV 410
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
TI + G+ K G+ + + + L +G
Sbjct: 411 NFDTIFVGGMIKAGKRLETTKYIERTLKRG 440
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 187/402 (46%), Gaps = 31/402 (7%)
Query: 57 QITSAFSV-LCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAY 115
Q+T F + +CN F ++P F + + PD ST + + ++ ++
Sbjct: 74 QLTHEFFLQVCNNFPLSWRPVHRFF-----LYSQTHHPDFTHTSTTSNKMLA--IIGNSR 126
Query: 116 N--LYSEM---LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
N L+ E+ + KR + T+ ++ +LK+ V + M +V T +
Sbjct: 127 NMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNR 186
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
V+ LCKE V+EAK V + +K KPD +TY +++ G+C V ++ +A ++N M
Sbjct: 187 GVETLCKEKLVEEAKFVF-IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEG 245
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP-NVVTYSSLIDGLCKSGRISDA 289
D+++ ++ L K D+A +F M ++ + Y +ID LCK+GRI A
Sbjct: 246 FDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMA 305
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
++ +EM RG+ + +T++SL+ L V A L++ +++ P++ Y L+ G
Sbjct: 306 RKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKG 361
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
L K R +A EVF+ ++ +G + TY +++ G + + G P
Sbjct: 362 LVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQG------------HLGRRGRKGPDPL 409
Query: 410 AVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYATEF 451
I + + + G + K + + + RGL F ++F
Sbjct: 410 VNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKF 451
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVV- 96
+ PD T+ +I +C +G + A + + G+ D I++ K Q D
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 97 -----------------MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISG 139
Y +ID LCK+ ++ A ++ EM + + D +T+ +LI G
Sbjct: 271 KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 140 FCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
+ ++ EA GL+ + NPD+ + L+ L K + EA V MI+ G +P
Sbjct: 331 LLVKRRVVEAYGLVEGVE----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPI 386
Query: 200 VVTYSSLMDGY 210
+ TY L+ G+
Sbjct: 387 MHTYLMLLQGH 397
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 173/405 (42%), Gaps = 33/405 (8%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P ++ +N ++ Y A+ + ++M + PD FT + ++ + +
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEML 122
+ + ++G DV + S+++D K + D+ ++S +
Sbjct: 263 EIHGYVIRKGI------------------DSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 123 AKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVK 182
+ D +++ +L++G+ G+ EA+ L QMV + P FS ++ A +
Sbjct: 305 CR----DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 183 EAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMI 242
K + +++GG ++ S+L+D Y + A IF+ M + D S++ +I
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL----DEVSWTAII 416
Query: 243 NGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS-RGL 301
G +A++LF++M + + PN V + +++ G + +AW N M GL
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 476
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQE 361
+ Y+++ D L + ++ A + I KM + P ++ LL L+ A++
Sbjct: 477 NQELEHYAAVADLLGRAGKLEEAYNFISKM---CVEPTGSVWSTLLSSCSVHKNLELAEK 533
Query: 362 VFQDLL-IKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
V + + + N+ Y +M N +G + E L +M G
Sbjct: 534 VAEKIFTVDSENMG--AYVLMCNMYASNGRWKEMAKLRLRMRKKG 576
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 165/393 (41%), Gaps = 57/393 (14%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYST 100
DL+T N L+N Y L + S SV N+F Q + + + +K +
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISV-GNVFDEMPQRTSNSGDEDVKAE------------- 184
Query: 101 IIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS 160
C D+ E++ ++ DVV+Y T+I+G+ G ++A+ ++ +M
Sbjct: 185 ----TCIMPFGIDSVRRVFEVMPRK---DVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 161 INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAE 220
+ PD +T S ++ + V + K + +I+ G DV SSL+D Y + +E
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGL 280
+F+ + D S++ ++ G + ++AL LF+QM T + P V +SS+I
Sbjct: 298 RVFSRL----YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 353
Query: 281 CKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK----------------------- 317
+ +L + G N+ S+L+D K
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWT 413
Query: 318 --------NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLL-I 368
+ H A+SL ++MK QG+ PN + +L G + +A F + +
Sbjct: 414 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 473
Query: 369 KGYNLDVRTYTIMINGLCKDGLFDEALALMSKM 401
G N ++ Y + + L + G +EA +SKM
Sbjct: 474 YGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 151/330 (45%), Gaps = 21/330 (6%)
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKN 186
SP V+ + ++I F +A+ +M PD F ++ + ++ ++
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYC-LVNEVNKAE--DIFNTM---TRMELAPDVQSYS- 239
V +++ G D+ T ++LM+ Y L+ +K ++F+ M T DV++ +
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 240 IMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR 299
IM G +D +F+ M ++ VV+Y+++I G +SG DA +V EM +
Sbjct: 187 IMPFG------IDSVRRVFEVMPRKD----VVSYNTIIAGYAQSGMYEDALRMVREMGTT 236
Query: 300 GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
L P+ T SS+L + V + + +GI +VY + L+D K R++D+
Sbjct: 237 DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 360 QEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYA 419
+ VF L Y D ++ ++ G ++G ++EAL L +M P AV + +I A
Sbjct: 297 ERVFSRL----YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 352
Query: 420 LFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
++L ++ G + +F A+
Sbjct: 353 CAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 163/424 (38%), Gaps = 95/424 (22%)
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
L P V+ + ++I L + A + EM A PD + +++ ++ L+
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCK---EGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
+ +V ++ D+YT + L++ K G NV E P + S
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVF------DEMPQRTSNSGD 178
Query: 207 MD---GYCLVN-EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
D C++ ++ +F M R DV SY+ +I G + M +DAL + ++M
Sbjct: 179 EDVKAETCIMPFGIDSVRRVFEVMPR----KDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 263 TENITPNVVTY-----------------------------------SSLIDGLCKSGRIS 287
T ++ P+ T SSL+D KS RI
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP--------- 338
D+ + + ++ R + I+++SL+ +N + A+ L ++M + P
Sbjct: 295 DSERVFSRLYCR----DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
Query: 339 --------------------------NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYN 372
N++ + L+D K G +K A+++F + +
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV---- 406
Query: 373 LDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKL 432
LD ++T +I G G EA++L +M+ G PN V + ++ A G D+A
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 433 LRQM 436
M
Sbjct: 467 FNSM 470
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 156/340 (45%), Gaps = 3/340 (0%)
Query: 71 RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDV 130
R +Q T TF +K + L + + Y+ + SL + + EM+ + D
Sbjct: 164 REWQ-KTHTFFNWVKSKS-LFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDN 221
Query: 131 VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAV 190
+TY+T+I+ +A+ +M + PD T+S ++D K GKV+E ++
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
+ G KPD + +S L + + + + M M++ P+V Y+ ++ + +
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
A +LF +M +TPN T ++L+ K+ DA +L EM ++ P + I Y++
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 311 LLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
LL+ + A L MK P+ ++YT +L+ GG+ + A E+F+++L
Sbjct: 402 LLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPN 409
G ++V T ++ L K D+ + + G P+
Sbjct: 462 GVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 1/284 (0%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D + YSTII + L N A + M + PD VTY+ ++ + G+++E + L
Sbjct: 220 DNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLY 279
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+ V PD FS+L + G + VL M KP+VV Y++L++
Sbjct: 280 ERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTY 273
+ A +FN M L P+ ++ + ++ K + DAL L+++M + + + Y
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 274 SSLIDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
++L++ G +A L N+M S P+ +Y+++L+ + A+ L ++M
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEML 459
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVR 376
G+ NV T L+ L K R+ D VF + +G D R
Sbjct: 460 KAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDR 503
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 131/253 (51%), Gaps = 3/253 (1%)
Query: 191 MIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKM 250
M+K G + D +TYS+++ N NKA + F M + L PD +YS +++ K
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 251 VDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSS 310
V++ L+L+++ P+ + +S L ++G ++ EM S + PNV+ Y++
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
LL+A+ + A SL +M G+ PN T T L+ K +DA ++++++ K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 371 YNLDVRTYTIMINGLCKD-GLFDEALALMSKMEDN-GCTPNAVTYEIIIYALFQKGDNDK 428
+ +D Y ++N +C D GL +EA L + M+++ C P+ +Y ++ G +K
Sbjct: 392 WPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 429 AEKLLRQMIARGL 441
A +L +M+ G+
Sbjct: 451 AMELFEEMLKAGV 463
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 27/319 (8%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
I ++ T + Y AI ++M +MPD T++ +++ Y G++ S+
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 68 IFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRIS 127
G++PD I F+ + K+ G+ D + Y + EM + +
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRY------------------VLQEMKSMDVK 323
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
P+VV Y TL+ G+ A L N+M+ + P+ T + LV GK + A++
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIY---GKARWARDA 380
Query: 188 LAVM--IKGGEKP-DVVTYSSLMDGYCLVNEVNKAEDIFNTMTR-MELAPDVQSYSIMIN 243
L + +K + P D + Y++L++ + +AE +FN M ++ PD SY+ M+N
Sbjct: 381 LQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLN 440
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
+ A+ LF++M + NV+ + L+ L K+ RI D + + RG+ P
Sbjct: 441 IYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKP 500
Query: 304 NVITYSSLLD--ALCKNHH 320
+ LL ALC++
Sbjct: 501 DDRLCGCLLSVMALCESSE 519
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 149/357 (41%), Gaps = 27/357 (7%)
Query: 13 FFTSLVKTKHYATAISLSQQMDFRRVMP----DLFTFNILINCYCHLGQITSAFSVLCNI 68
F+ +K+ + L ++M V D T++ +I C A +
Sbjct: 188 FYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERM 247
Query: 69 FKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
+K G PD +T YS I+D K V + +LY +A P
Sbjct: 248 YKTGLMPDEVT------------------YSAILDVYSKSGKVEEVLSLYERAVATGWKP 289
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVL 188
D + ++ L F G +L +M + P+V ++ L++A+ + GK A+++
Sbjct: 290 DAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLF 349
Query: 189 AVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKI 248
M++ G P+ T ++L+ Y A ++ M + D Y+ ++N I
Sbjct: 350 NEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADI 409
Query: 249 KMVDDALNLFKQM-HTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
+ ++A LF M + P+ +Y+++++ G+ A EL EM G+ NV+
Sbjct: 410 GLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMG 469
Query: 308 YSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD--GLCKGGRLKDAQEV 362
+ L+ L K +D+ + + +G+ P+ LL LC+ +DA++V
Sbjct: 470 CTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESS--EDAEKV 524
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
QL E + L +MV + D T+S ++ + +A M K G PD VTYS
Sbjct: 203 QLIEEMAL--EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYS 260
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
+++D Y +V + ++ PD ++S++ + D + ++M +
Sbjct: 261 AILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSM 320
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
++ PNVV Y++L++ + ++G+ A L NEM GL PN T ++L+ K +A
Sbjct: 321 DVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDA 380
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK-GYNLDVRTYTIMIN 383
+ L ++MK + + Y LL+ G ++A+ +F D+ D +YT M+N
Sbjct: 381 LQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLN 440
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAV 411
G ++A+ L +M G N +
Sbjct: 441 IYGSGGKAEKAMELFEEMLKAGVQVNVM 468
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 282 KSGRISDAWELVNEMH----SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL 337
KS R ++L+ EM G+ + ITYS+++ + + + AI ++M G++
Sbjct: 194 KSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLM 253
Query: 338 PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALAL 397
P+ TY+ +LD K G++++ +++ + G+ D ++++ + G +D +
Sbjct: 254 PDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYV 313
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+ +M+ PN V Y ++ A+ + G A L +M+ GL
Sbjct: 314 LQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 31 QQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKL 90
Q+M V P++ +N L+ G+ A S+ + + G P+ T ++KI GK
Sbjct: 315 QEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKA 374
Query: 91 AQP-----------------DVVMYSTIIDSLCKD-KLVNDAYNLYSEMLAK-RISPDVV 131
D ++Y+T+++ +C D L +A L+++M + PD
Sbjct: 375 RWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNF 433
Query: 132 TYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM 191
+YT +++ + G+ ++A+ L +M+ + +V + LV L K ++ + V +
Sbjct: 434 SYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLS 493
Query: 192 IKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
IK G KPD L+ L AE + + R
Sbjct: 494 IKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 530
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 198/472 (41%), Gaps = 55/472 (11%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + N F K + L +Q +MPD F+F ++I G + A
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVE 128
Query: 65 LCNIFKRGYQPDTI---------------TFNTIIKIQGK-------------------- 89
FK Y + I F+ I + +G
Sbjct: 129 KLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 90 ----LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQ 145
+ + DVV ++ +I K K + +A + M K VV++ ++SG+ G
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEK----SVVSWNAMLSGYAQNGF 244
Query: 146 LKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSS 205
++A+ L N M+ + P+ T+ I++ A ++++ ++ + + + ++
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
L+D + ++ A IFN + ++ +++ MI+G +I + A LF M N
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTMPKRN 361
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG-LPPNVITYSSLLDALCKNHHVDNA 324
VV+++SLI G +G+ + A E +M G P+ +T S+L A ++
Sbjct: 362 ----VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
++ ++ I N Y L+ +GG L +A+ VF ++ + DV +Y +
Sbjct: 418 DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTA 473
Query: 385 LCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+G E L L+SKM+D G P+ VTY ++ A + G + +++ + +
Sbjct: 474 FAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 199/450 (44%), Gaps = 52/450 (11%)
Query: 23 YATAISLSQQMDFRRV-----MPDLFTFNILINCYCHLGQITSA---FSVLCNIFKRGYQ 74
Y+ SLS D R+V + D+ ++N +I Y LG+ A FS + N F G +
Sbjct: 172 YSRCRSLS---DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF--GCR 226
Query: 75 PDTITFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVNDAYNL 117
PD IT ++ L ++ + + ++D K ++++A +
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 118 YSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCK 177
+S M K DVV++ +++G+ +G+ ++AV L +M + I DV T+S + +
Sbjct: 287 FSNMSVK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQS 237
G EA V M+ G KP+ VT S++ G V + ++I + +
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNG 402
Query: 238 Y---SIMINGL----CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
+ +++IN L K K VD A +F + + +VVT++ +I G + G + A
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE--RDVVTWTVMIGGYSQHGDANKAL 460
Query: 291 ELVNEMHSRGLP--PNVITYSSLLDALCK--NHHVDNAISLIKKMKHQGILPNVYTYTIL 346
EL++EM PN T S L A + I Q +P ++ L
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVSNCL 519
Query: 347 LDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
+D K G + DA+ VF +++ K + T+T ++ G G +EAL + +M G
Sbjct: 520 IDMYAKCGSISDARLVFDNMMAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+ VT +++YA G D+ + +M
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRM 605
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 184/428 (42%), Gaps = 41/428 (9%)
Query: 23 YATAISLSQQMDFRRVMP----DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTI 78
Y + LS + R P ++ +N LI Y G + + + PD
Sbjct: 69 YISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNY 128
Query: 79 TFNTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
TF + K G+++ +V + + ++ + + ++DA ++ EM
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTFSILVDALCKEGK 180
DVV++ ++I + +G+ K A+ + ++M + PD T ++ G
Sbjct: 189 SVW----DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
K + + ++ + L+D Y +++A +F+ M+ DV S++
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS----VKDVVSWNA 300
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
M+ G +I +DA+ LF++M E I +VVT+S+ I G + G +A + +M S G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 301 LPPNVITYSSLLD------ALCKNHHVD-NAISLIKKMKHQGILPNVYTYTILLDGLCKG 353
+ PN +T S+L AL + AI ++ G L+D K
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 354 GRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCT--PNAV 411
++ A+ +F L K DV T+T+MI G + G ++AL L+S+M + C PNA
Sbjct: 421 KKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 412 TYEIIIYA 419
T + A
Sbjct: 479 TISCALVA 486
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 173/433 (39%), Gaps = 85/433 (19%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ +N + + A+ L ++M ++ D+ T++ I+ Y G A V
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 67 NIFKRGYQPDTITFNTIIK--------IQGKLAQPDVVMY----------------STII 102
+ G +P+ +T +++ + GK + Y + +I
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 103 DSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK--S 160
D K K V+ A ++ + K DVVT+T +I G+ G +A+ LL++M +
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKE--RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 161 INPDVYTFSI------------------------------------LVDALCKEGKVKEA 184
P+ +T S L+D K G + +A
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 185 KNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMING 244
+ V M+ E VT++SLM GY + +A IF+ M R+ D + +++
Sbjct: 533 RLVFDNMMAKNE----VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 245 LCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
M+D + F +M T ++P Y+ L+D L ++GR++ A L+ EM PP
Sbjct: 589 CSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME--PP 646
Query: 304 NVITYSSLLDALCKNHHV----DNAISLIKKM--KHQGILPNVYTYTILLDGLCKGGRLK 357
V+ + L + C+ H + A I ++ H G +YT+L + GR K
Sbjct: 647 PVVWVAFL--SCCRIHGKVELGEYAAEKITELASNHDG------SYTLLSNLYANAGRWK 698
Query: 358 DAQEVFQDLLIKG 370
D + + KG
Sbjct: 699 DVTRIRSLMRHKG 711
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 136/311 (43%), Gaps = 15/311 (4%)
Query: 134 TTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIK 193
+ LIS + VG L AV LL + + VY ++ L+ + G + + +M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRR--FPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 194 GGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDD 253
PD T+ + ++ V E +V + ++ + + + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 254 ALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLL 312
A +F +M + VV+++S+I+ K G+ A E+ + M + G P+ IT ++L
Sbjct: 181 ARKVFDEMSVWD----VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 313 D--ALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
A H + + ++ N++ L+D K G + +A VF ++ +K
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSE--MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK- 293
Query: 371 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
DV ++ M+ G + G F++A+ L KM++ + VT+ I Q+G +A
Sbjct: 294 ---DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 431 KLLRQMIARGL 441
+ RQM++ G+
Sbjct: 351 GVCRQMLSSGI 361
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 202/474 (42%), Gaps = 81/474 (17%)
Query: 3 PSPPIIEFNKFFTSLV-KTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
PSP +N K + T L + M PD +TF +++ + GQ+
Sbjct: 70 PSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVG 129
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
SV + + G+ D + + + GK CKD + A ++ EM
Sbjct: 130 SSVHGLVLRIGFDKDVVVGTSFVDFYGK----------------CKD--LFSARKVFGEM 171
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ + V++T L+ + G+L+EA + + M +++ +++ LVD L K G +
Sbjct: 172 PER----NAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDL 223
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
AK + M K D+++Y+S++DGY ++ A D+F DV+++S +
Sbjct: 224 VNAKKLFDEM----PKRDIISYTSMIDGYAKGGDMVSARDLFEEAR----GVDVRAWSAL 275
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPN----------------------VVTY------ 273
I G + ++A +F +M +N+ P+ V +Y
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMN 335
Query: 274 --------SSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAI 325
+LID K G + A +L EM R L ++Y S+++ + + AI
Sbjct: 336 KFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL----VSYCSMMEGMAIHGCGSEAI 391
Query: 326 SLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNL--DVRTYTIMIN 383
L +KM +GI+P+ +T++L +C RL + + +L+ K Y++ Y+ ++N
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILK-VCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVN 450
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
L + G EA L+ M +A + ++ G+ + AE + R +
Sbjct: 451 LLSRTGKLKEAYELIKSMP---FEAHASAWGSLLGGCSLHGNTEIAEVVARHLF 501
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 173/367 (47%), Gaps = 27/367 (7%)
Query: 57 QITSAFSVLCNIFKRGYQPDTITFNTII----KIQGKLAQPDVVMYSTIIDSLCKDKLVN 112
++ S + L N +GY + F T+ ++ LA+PD + ++ + V
Sbjct: 68 RVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVR 127
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
+++ +L DVV T+ + + L A + +M + + +++ LV
Sbjct: 128 VGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER----NAVSWTALV 183
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
A K G+++EAK++ +M + ++ ++++L+DG ++ A+ +F+ M +
Sbjct: 184 VAYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR--- 236
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
D+ SY+ MI+G K + A +LF+ E +V +S+LI G ++G+ ++A+++
Sbjct: 237 -DIISYTSMIDGYAKGGDMVSARDLFE----EARGVDVRAWSALILGYAQNGQPNEAFKV 291
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI--LPNVYTYTILLDGL 350
+EM ++ + P+ L+ A C + HQ + + Y L+D
Sbjct: 292 FSEMCAKNVKPDEFIMVGLMSA-CSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMN 350
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
K G + A ++F+++ + D+ +Y M+ G+ G EA+ L KM D G P+
Sbjct: 351 AKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDE 406
Query: 411 VTYEIII 417
V + +I+
Sbjct: 407 VAFTVIL 413
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 154/322 (47%), Gaps = 24/322 (7%)
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSI-NPDVYTFSILVDALCKEGKVKEAK 185
SP + LI G+ E V +L +M+ + PD YTF +++ G+V+
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
+V ++++ G DVV +S +D Y ++ A +F M + S++ ++
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER----NAVSWTALVVAY 186
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
K +++A ++F M N+ ++++L+DGL KSG + +A +L +EM R ++
Sbjct: 187 VKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKR----DI 238
Query: 306 ITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQD 365
I+Y+S++D K + +A L ++ + G+ +V ++ L+ G + G+ +A +VF +
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEAR--GV--DVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 366 LLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF---- 421
+ K D +++ + G F+ + S + N + ++ AL
Sbjct: 295 MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR---MNKFSSHYVVPALIDMNA 351
Query: 422 QKGDNDKAEKLLRQMIARGLLT 443
+ G D+A KL +M R L++
Sbjct: 352 KCGHMDRAAKLFEEMPQRDLVS 373
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 216/487 (44%), Gaps = 86/487 (17%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ + T+L A+ L +M R V+ ++N L+ G + A V
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMPERNVV----SWNTLVTGLIRNGDMEKAKQVFD 193
Query: 67 NIFKRGYQPDTITFNTIIK-------------IQGKLAQPDVVMYSTIIDSLCKDKLVND 113
+ R D +++N +IK + G +++ +VV +++++ C+ V +
Sbjct: 194 AMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVRE 249
Query: 114 AYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV--LKSINPDVYTFSIL 171
AY L+ EM + ++V++T +ISGF +EA+ L +M + +++P+ T L
Sbjct: 250 AYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 305
Query: 172 VDALCKEGK--VKEAKNVLAVMIKGGEKP---DVVTYSSLMDGYCLVNEVNKAEDIFNTM 226
A G + + + A +I G + D SL+ Y + A+ + N
Sbjct: 306 AYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE- 364
Query: 227 TRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI 286
+ D+QS +I+IN K ++ A LF+++ + + + V+++S+IDG ++G +
Sbjct: 365 -----SFDLQSCNIIINRYLKNGDLERAETLFERVKSLH---DKVSWTSMIDGYLEAGDV 416
Query: 287 SDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTIL 346
S A+ L ++H + + +T++ ++ L +N A SL+ M G+ P TY++L
Sbjct: 417 SRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVL 472
Query: 347 LDG-------------------------------------LCKGGRLKDAQEVFQDLLIK 369
L K G ++DA E+F ++ K
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 370 GYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKA 429
D ++ MI GL GL D+AL L +M D+G PN+VT+ ++ A G +
Sbjct: 533 ----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRG 588
Query: 430 EKLLRQM 436
+L + M
Sbjct: 589 LELFKAM 595
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 153/342 (44%), Gaps = 30/342 (8%)
Query: 48 LINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQP-----------DVV 96
L++ Y G I SA S+L F Q I N +K G L + D V
Sbjct: 345 LVHMYASSGLIASAQSLLNESFD--LQSCNIIINRYLK-NGDLERAETLFERVKSLHDKV 401
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
++++ID + V+ A+ L+ ++ K D VT+T +ISG EA LL+ M
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDM 457
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE--KPDVVTYSSLMDGYCLVN 214
V + P T+S+L+ + + + K++ V+ K PD++ +SL+ Y
Sbjct: 458 VRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCG 517
Query: 215 EVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYS 274
+ A +IF M + D S++ MI GL + D ALNLFK+M PN VT+
Sbjct: 518 AIEDAYEIFAKMVQ----KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFL 573
Query: 275 SLIDGLCKSGRISDAWELVNEM-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKH 333
++ SG I+ EL M + + P + Y S++D L + + A I +
Sbjct: 574 GVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP- 632
Query: 334 QGILPNVYTYTILLDGLCK-GGRLKDAQEVFQDLLIKGYNLD 374
P+ Y LL GLC R KDA+ + + ++ LD
Sbjct: 633 --FTPDHTVYGALL-GLCGLNWRDKDAEGIAERAAMRLLELD 671
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 142/297 (47%), Gaps = 48/297 (16%)
Query: 178 EGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQS 237
EG + A+++L + + G VV ++SL+ Y +++A +F M ++ +
Sbjct: 55 EGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVT 110
Query: 238 YSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMH 297
+ M+ G K + +++A LF++M NVV+++ ++ LC GR DA EL +EM
Sbjct: 111 CNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 298 SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP------------------- 338
R NV+++++L+ L +N ++ A + M + ++
Sbjct: 166 ER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKL 221
Query: 339 --------NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
NV T+T ++ G C+ G +++A +F ++ + ++ ++T MI+G + L
Sbjct: 222 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNEL 277
Query: 391 FDEALALMSKMED--NGCTPNAVTYEIIIYALFQKGDNDK--AEKLLRQMIARGLLT 443
+ EAL L +M+ + +PN T + YA G + E+L Q+I+ G T
Sbjct: 278 YREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWET 334
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 136/283 (48%), Gaps = 11/283 (3%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP-DVVTYTTLISGFCIVGQLKEAVGL 152
D +S + ++L K DA ++ ++L K P D T T +IS C G +K A+G+
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIF-KILDKFSCPQDGFTVTAIISALCSRGHVKRALGV 195
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
++ ++ + L+ + VKEA+ V+ M G PD+ ++SL+ C
Sbjct: 196 MHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCE 255
Query: 213 VNEVNK--------AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
N VN+ A +I M ++ P SY+I+++ L + + V ++ + +QM
Sbjct: 256 RN-VNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRS 314
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
P+ +Y ++ L +GR ++V+EM RG P Y L+ LC V+ A
Sbjct: 315 GCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFA 374
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLL 367
+ L +KMK + Y +L+ LCKGG + +E++++ L
Sbjct: 375 LQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 135/282 (47%), Gaps = 7/282 (2%)
Query: 164 DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIF 223
D TFSI+ + L K GK ++A + ++ K D T ++++ C V +A +
Sbjct: 137 DKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM 196
Query: 224 NTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCK- 282
+ + ++ Y ++ G + V +A + + M + ITP++ ++SL+ LC+
Sbjct: 197 HHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCER 256
Query: 283 ------SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
SG + +A ++ EM S + P ++Y+ LL L + V + ++++MK G
Sbjct: 257 NVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGC 316
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALA 396
P+ +Y ++ L GR ++ +++ +G+ + + Y +I LC + AL
Sbjct: 317 DPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQ 376
Query: 397 LMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIA 438
L KM+ + Y+++I L + G+ +K +L + ++
Sbjct: 377 LFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALS 418
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
A D Q++SI+ L K+ +DA+ +FK + + + T +++I LC G + A
Sbjct: 135 AMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALG 194
Query: 292 LVNEMHSRGLPPNVIT-YSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGL 350
+++ H + N ++ Y SLL +V A +I+ MK GI P+++ + LL L
Sbjct: 195 VMHH-HKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCL 253
Query: 351 CK-------GGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
C+ G + +A + ++ +Y I+++ L + E+ ++ +M+
Sbjct: 254 CERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKR 313
Query: 404 NGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+GC P+ +Y ++ L+ G K +++ +MI RG
Sbjct: 314 SGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 24/282 (8%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN-- 67
F+ +LVK AI + + +D D FT +I+ C G + A V+ +
Sbjct: 141 FSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHK 200
Query: 68 --------------IFKRGYQPDTITFNTIIK-IQGKLAQPDVVMYSTIIDSLCKDK--- 109
+F Q + +I+ ++ PD+ +++++ LC+
Sbjct: 201 DVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNR 260
Query: 110 ----LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
LV +A N+ EM + +I P ++Y L+S +++E+ +L QM +PD
Sbjct: 261 NPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDT 320
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
++ +V L G+ + ++ MI+ G +P+ Y L+ C V VN A +F
Sbjct: 321 GSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEK 380
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
M R + Q Y ++I LCK + L+++ + ++T
Sbjct: 381 MKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVT 422
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 94/232 (40%), Gaps = 23/232 (9%)
Query: 31 QQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKL 90
Q M + PDLF FN L+ C C N G P+ + N +++++
Sbjct: 232 QDMKSAGITPDLFCFNSLLTCLCERN---------VNRNPSGLVPEAL--NIMLEMRSYK 280
Query: 91 AQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAV 150
QP + Y+ ++ L + + V ++ + +M PD +Y ++ + G+ +
Sbjct: 281 IQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGN 340
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 210
++++M+ + P+ + L+ LC +V A + M + Y L+
Sbjct: 341 QIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKL 400
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL-NLFKQM 261
C K +++ ++ SI + C I ++D ++ +FK M
Sbjct: 401 CKGGNFEKGRELWE-----------EALSIDVTLSCSISLLDPSVTEVFKPM 441
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 169/373 (45%), Gaps = 21/373 (5%)
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDK---LVNDAYNLYSEMLAKR---ISPD 129
T+ + + I ++ P V +Y+T+I S+ + + A++LY ++L+ R + P+
Sbjct: 52 STVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPN 111
Query: 130 VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINP---DVYTFSILVDALCKEGKVKEAKN 186
TY +L Q L+ VLK + P D + + LV GK++EA++
Sbjct: 112 EFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARS 171
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+ + +PD+ T+++L+ Y E++ E++ RM++ P+ S +I
Sbjct: 172 LFERI----REPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCA 227
Query: 247 KIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVI 306
+ + + N+T N +SLID K G +S A ++ +EM R +V
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR----DVS 283
Query: 307 TYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL 366
Y++++ L + I L K + QG++P+ T+ + + G + + ++F +
Sbjct: 284 CYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM 343
Query: 367 -LIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGD 425
+ G V Y +++ L + G +EA + KM PNA + + + GD
Sbjct: 344 KAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMP---VKPNATLWRSFLGSSQTHGD 400
Query: 426 NDKAEKLLRQMIA 438
++ E L+ ++
Sbjct: 401 FERGEIALKHLLG 413
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 158/376 (42%), Gaps = 32/376 (8%)
Query: 17 LVKTKHYATAISLSQQMDFRRVMPD--LFTFNILINCYC---HLGQITSAFSVLCNIFKR 71
L K H ++ + LS + R +P+ +F +N LI+ + Q AFS+ I
Sbjct: 44 LSKLLHLSSTVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSS 103
Query: 72 G---YQPDTITFNTIIKIQGKLAQ---PDVVMYSTII---DSLCKDKLVNDAY-NLYS-- 119
+P+ T+ ++ K G AQ +++ ++ + + D+ V A Y+
Sbjct: 104 RSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANC 163
Query: 120 ------EMLAKRI-SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
L +RI PD+ T+ TL++ + ++ +L + + P+ + L+
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALI 223
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
+ G+ ++K + +SL+D Y ++ A +F+ M++
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR--- 280
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
DV Y+ MI GL + + L+K + ++ + P+ T+ I SG + + ++
Sbjct: 281 -DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQI 339
Query: 293 VNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
N M + G+ P V Y L+D L ++ ++ A IKKM + PN + L
Sbjct: 340 FNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMP---VKPNATLWRSFLGSSQ 396
Query: 352 KGGRLKDAQEVFQDLL 367
G + + + LL
Sbjct: 397 THGDFERGEIALKHLL 412
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 85 KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
K+ +++Q DV Y+ +I L + LY ++++ + PD T+ IS G
Sbjct: 272 KVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSG 331
Query: 145 QLKEAVGLLNQM-VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTY 203
+ E + + N M + I P V + LVD L + G+++EA+ + M KP+ +
Sbjct: 332 LVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM---PVKPNATLW 388
Query: 204 SSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN---GLCKIKMVDDALNLFKQ 260
S + + + E + +E + +Y ++ N G+ + V+ L K
Sbjct: 389 RSFLGSSQTHGDFERGEIALKHLLGLEF-ENSGNYVLLSNIYAGVNRWTDVEKTRELMKD 447
Query: 261 MHTENITPNVVT 272
H N +P + T
Sbjct: 448 -HRVNKSPGIST 458
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 174/402 (43%), Gaps = 31/402 (7%)
Query: 23 YATAISLSQQMDFRRVMP--DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITF 80
YA SL + MP D T+ LI+ Y + A + + GY P+ T
Sbjct: 105 YAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164
Query: 81 NTIIKIQGKLAQ-----------------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLA 123
+++IK + +V + S ++D + L++DA ++ + +
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ + V++ LI+G ++A+ L M+ P ++++ L A G +++
Sbjct: 225 R----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQ 280
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
K V A MIK GEK ++L+D Y ++ A IF+ + + DV S++ ++
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLT 336
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPP 303
+ +A+ F++M I PN +++ S++ SG + + W M G+ P
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVP 396
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
Y +++D L + ++ A+ I++M I P + LL+ C+ + +
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLNA-CRMHKNTELGAYA 452
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
+ + + D + I+ N G +++A + KM+++G
Sbjct: 453 AEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESG 494
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 174/388 (44%), Gaps = 30/388 (7%)
Query: 67 NIFKRGYQP-DTITFNTIIK--------IQGKLAQP---------DVVMYSTIIDSLCKD 108
N + Y P D +NT++K IQG++ D+VM +T+++ K
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 109 KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTF 168
+ +A ++ +M + D VT+TTLISG+ + +A+ NQM+ +P+ +T
Sbjct: 109 GSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
S ++ A E + + +K G +V S+L+D Y ++ A+ +F+ +
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-- 222
Query: 229 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISD 288
E DV S++ +I G + + AL LF+ M + P+ +Y+SL +G +
Sbjct: 223 -ESRNDV-SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQ 280
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
+ M G ++LLD K+ + +A + ++ + +V ++ LL
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLT 336
Query: 349 GLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTP 408
+ G K+A F+++ G + ++ ++ GL DE M+ +G P
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVP 396
Query: 409 NAVTYEIIIYALFQKGDNDKAEKLLRQM 436
A Y ++ L + GD ++A + + +M
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEM 424
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 191/436 (43%), Gaps = 37/436 (8%)
Query: 3 PSPP-IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSA 61
PSPP I FN F L ++ I Q++ R V L F+ L I A
Sbjct: 71 PSPPESIVFNPFLRDLSRSSEPRATILFYQRI--RHVGGRLDQFSFL--------PILKA 120
Query: 62 FSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEM 121
S + +F+ G + + F L P V + +D +N A N++ EM
Sbjct: 121 VSKVSALFE-GMELHGVAFKI-----ATLCDPFV--ETGFMDMYASCGRINYARNVFDEM 172
Query: 122 LAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKV 181
+ DVVT+ T+I +C G + EA L +M ++ PD +V A + G +
Sbjct: 173 SHR----DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 182 KEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
+ + + +I+ + D ++L+ Y ++ A + F M+ L + M
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS----TAM 284
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL 301
++G K +DDA +F Q +++ V ++++I +S +A + EM G+
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDL----VCWTTMISAYVESDYPQEALRVFEEMCCSGI 340
Query: 302 PPNVITYSSLLDALCKNHHVDNAISLIKKMKH-QGILPNVYTYTILLDGLCKGGRLKDAQ 360
P+V++ S++ A C N + + + H G+ + L++ K G L +
Sbjct: 341 KPDVVSMFSVISA-CANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYAL 420
+VF+ + + +V +++ MIN L G +AL+L ++M+ PN VT+ ++Y
Sbjct: 400 DVFEKMPRR----NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 421 FQKGDNDKAEKLLRQM 436
G ++ +K+ M
Sbjct: 456 SHSGLVEEGKKIFASM 471
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 151/366 (41%), Gaps = 60/366 (16%)
Query: 41 DLFTFNILINCYCHLGQITSAFS---------------VLCNIFKRGYQPDTITFNTII- 84
D+ T+N +I YC G + AF +LCNI + + +N I
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 85 --------KIQGKLAQPDVVMYS------------------------TIIDSLCKDKLVN 112
++ L V MY+ ++ K ++
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLD 295
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILV 172
DA ++ + K D+V +TT+IS + +EA+ + +M I PDV + ++
Sbjct: 296 DAQVIFDQTEKK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 173 DALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELA 232
A G + +AK V + + G + ++ ++L++ Y ++ D+F M R
Sbjct: 352 SACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR--- 408
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
+V S+S MIN L DAL+LF +M EN+ PN VT+ ++ G SG + + ++
Sbjct: 409 -NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 293 VNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
M + P + Y ++D + + + A+ +I+ M + NV + L+
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP---VASNVVIWGSLMSACR 524
Query: 352 KGGRLK 357
G L+
Sbjct: 525 IHGELE 530
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 200/478 (41%), Gaps = 63/478 (13%)
Query: 8 IEFN-KFFTSLVKTKHYATAISLSQQM-DFRRVMPDLFTFNILINCYCHLGQITSAFSVL 65
IE N + FT + A I ++++ D R D F N +I Y Q +F++
Sbjct: 6 IETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALY 65
Query: 66 CNIFKRG-YQPDTITFNTIIK--------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAYN 116
++ K + PD TF T+ K QG + + D +V D Y
Sbjct: 66 RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV-DMYA 124
Query: 117 LYSEMLAKRISPDV------VTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
+ +M R + D V++T LISG+ G+L A L +QM DV ++
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM---PHVKDVVIYNA 181
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
++D K G + A+ + M V+T+++++ GYC + +++ A +F+ M
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTH----KTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMH-TENITPNVVTYSSLIDGLCKSGRISDA 289
L S++ MI G C+ K + + LF++M T ++ P+ VT S++ + +G +S
Sbjct: 238 LV----SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL------------ 337
+ + L V +++LD K ++ A + +M + +
Sbjct: 294 EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
Query: 338 ------------------PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYT 379
P+ T ++ GG +++ ++ F + G N + Y
Sbjct: 354 GNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYG 413
Query: 380 IMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
M++ L + G EA L++ M PN + + A Q D ++AE++L++ +
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNMP---FEPNGIILSSFLSACGQYKDIERAERILKKAV 468
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 190/432 (43%), Gaps = 75/432 (17%)
Query: 11 NKF-FTSLVKTKHYATAISLSQQMDF----RRVMPDLFTFNILINCYCHLGQITSAFSVL 65
NK+ F L+K +++SL Q + V D+F N LI+CY G + SA
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA---- 185
Query: 66 CNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKR 125
C +F T IK + DVV ++++I+ + + A L+ +M ++
Sbjct: 186 CKVF------------TTIK------EKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 126 ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAK 185
+ VT ++S + L+ + + + +N ++ + ++D K G +++AK
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 186 NVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
+ M E+ D VT+++++DGY + + A ++ N+M + D+ +++ +I+
Sbjct: 288 RLFDAM----EEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ----KDIVAWNALISAY 339
Query: 246 CKIKMVDDALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPN 304
+ ++AL +F ++ + N+ N +T S + + G A EL +HS
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG----ALELGRWIHSY----- 390
Query: 305 VITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQ 364
+K GI N + + L+ K G L+ ++EVF
Sbjct: 391 --------------------------IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 365 DLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
+ + DV ++ MI GL G +EA+ + KM++ PN VT+ + A G
Sbjct: 425 SVEKR----DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 480
Query: 425 DNDKAEKLLRQM 436
D+AE L QM
Sbjct: 481 LVDEAESLFHQM 492
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 135/265 (50%), Gaps = 14/265 (5%)
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
+ + D V ++T++D +++ Y E+L D+V + LIS + G+ EA
Sbjct: 293 MEEKDNVTWTTMLDGYA----ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 150 VGLLNQMVL-KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
+ + +++ L K++ + T + A + G ++ + + + + K G + + S+L+
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
Y ++ K+ ++FN++ + DV +S MI GL ++A+++F +M N+ P
Sbjct: 409 MYSKCGDLEKSREVFNSVEKR----DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISL 327
N VT++++ +G + +A L ++M S G+ P Y+ ++D L ++ +++ A+
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 328 IKKMKHQGILPNVYTYTILLDGLCK 352
I+ M I P+ + LL G CK
Sbjct: 525 IEAMP---IPPSTSVWGALL-GACK 545
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 178/426 (41%), Gaps = 29/426 (6%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P P + FN K A+ L +M + PD +T L+ C HL I
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 63 SVLCNIFKRG--YQPDTITFNTIIKIQGK-------------LAQPDVVMYSTIIDSLCK 107
V I +RG Y + I N ++ + K + + D+ ++T++ +
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 108 DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL--NQMVLKSINPDV 165
+ A ++ +M KR D+V++ +L+ G+ G + V L +++ + PD
Sbjct: 313 LGDMEAAQAVFDQM-PKR---DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR 368
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
T L+ G++ + V ++I+ K D S+L+D YC + +A +F T
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
T DV ++ MI GL AL LF +M E +TPN VT +++ SG
Sbjct: 429 ATE----KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGL 484
Query: 286 ISDAWELVNEMHSR-GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+ + + N M + G P Y SL+D LC+ V+ A +++ K + P+ +
Sbjct: 485 VEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ--KKMPMRPSQSMWG 542
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
+L C+GG + E+ L+K Y ++ N G + + ME+
Sbjct: 543 SILSA-CRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENR 601
Query: 405 GCTPNA 410
G A
Sbjct: 602 GVKKTA 607
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 171/376 (45%), Gaps = 34/376 (9%)
Query: 11 NKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFK 70
N + SLVK +++++ R PD+ +FN++I Y G A + +
Sbjct: 166 NYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVS 225
Query: 71 RGYQPDTITFNTII-------------KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNL 117
G +PD T +++ + G + + V S +I S + L++ +
Sbjct: 226 DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS---NALLDMYFKC 282
Query: 118 YSEMLAKRI-----SPDVVTYTTLISGFCIVGQLKEAVGLLNQMV---LKSINPDVYTFS 169
LAKR D+ ++ T++ GF +G ++ A + +QM L S N ++ +S
Sbjct: 283 KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYS 342
Query: 170 ILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRM 229
C + V+E + ++ K KPD VT SL+ G E++ + + R+
Sbjct: 343 ---KKGCDQRTVRELFYEMTIVEK--VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRL 397
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDA 289
+L D S +I+ CK +++ A +FK TE +V ++S+I GL G A
Sbjct: 398 QLKGDAFLSSALIDMYCKCGIIERAFMVFKTA-TEK---DVALWTSMITGLAFHGNGQQA 453
Query: 290 WELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTILLD 348
+L M G+ PN +T ++L A + V+ + + MK + G P Y L+D
Sbjct: 454 LQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
Query: 349 GLCKGGRLKDAQEVFQ 364
LC+ GR+++A+++ Q
Sbjct: 514 LLCRAGRVEEAKDIVQ 529
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 190/428 (44%), Gaps = 44/428 (10%)
Query: 23 YATAISLSQQMDFRRVM-------PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQP 75
+ +AI+ + +D +++ P++F +N +I+ F + ++ + P
Sbjct: 74 FFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSP 131
Query: 76 DTITFNTIIKIQGKLAQPDVVMYSTIIDSLC---KDKLVNDAYNLYSEM---------LA 123
D TF ++K L++ + + II S C + L N Y E+ A
Sbjct: 132 DRQTFLYLMKASSFLSEVKQI-HCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFA 190
Query: 124 KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
+ PDV ++ +I G+ G EA+ L +MV I PD YT L+ ++
Sbjct: 191 RMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRL 250
Query: 184 AKNVLAVMIKGGE--KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM 241
K V + + G +++ ++L+D Y E A+ F+ M + D++S++ M
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKK----KDMRSWNTM 306
Query: 242 INGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG-RISDAWELVNEMH-SR 299
+ G ++ ++ A +F QM ++ V+++SL+ G K G EL EM
Sbjct: 307 VVGFVRLGDMEAAQAVFDQMPKRDL----VSWNSLLFGYSKKGCDQRTVRELFYEMTIVE 362
Query: 300 GLPPNVITYSSLLDALCKN---HHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRL 356
+ P+ +T SL+ N H L+ +++ +G + + + L+D CK G +
Sbjct: 363 KVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKG---DAFLSSALIDMYCKCGII 419
Query: 357 KDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
+ A VF+ K DV +T MI GL G +AL L +M++ G TPN VT +
Sbjct: 420 ERAFMVFKTATEK----DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 417 IYALFQKG 424
+ A G
Sbjct: 476 LTACSHSG 483
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 172/382 (45%), Gaps = 28/382 (7%)
Query: 57 QITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYN 116
++ + F C FKR + + ++ +P+V +Y+ + +
Sbjct: 806 RLMNQFITACTSFKR--------LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLE 857
Query: 117 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTFSILVDAL 175
LY ML +SP TY++L+ + E+ L + K V + L+D
Sbjct: 858 LYVRMLRDSVSPSSYTYSSLVKASSFASRFGES---LQAHIWKFGFGFHVKIQTTLIDFY 914
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
G+++EA+ V M + D + +++++ Y V +++ A + N M+ A
Sbjct: 915 SATGRIREARKVFDEM----PERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA--- 967
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
+ + +ING + ++ A +LF QM ++I ++++++I G ++ R +A + +
Sbjct: 968 -TSNCLINGYMGLGNLEQAESLFNQMPVKDI----ISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 296 MHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGR 355
M G+ P+ +T S+++ A ++ + G + +VY + L+D K G
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 356 LKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEI 415
L+ A VF +L K ++ + +I GL G EAL + +KME PNAVT+
Sbjct: 1083 LERALLVFFNLPKK----NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVS 1138
Query: 416 IIYALFQKGDNDKAEKLLRQMI 437
+ A G D+ ++ R MI
Sbjct: 1139 VFTACTHAGLVDEGRRIYRSMI 1160
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 164/374 (43%), Gaps = 37/374 (9%)
Query: 14 FTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNI-----LINCYCHLGQITSAFSVLCNI 68
++SLVK +A+ S Q + F F++ LI+ Y G+I A V +
Sbjct: 874 YSSLVKASSFASRFGESLQAHIWKFG---FGFHVKIQTTLIDFYSATGRIREARKVFDEM 930
Query: 69 FKRGYQPDTITFNTIIK-------------IQGKLAQPDVVMYSTIIDSLCKDKLVNDAY 115
+R D I + T++ + ++++ + + +I+ + A
Sbjct: 931 PER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 116 NLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
+L+++M K D++++TT+I G+ + +EA+ + +M+ + I PD T S ++ A
Sbjct: 987 SLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC 1042
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDV 235
G ++ K V ++ G DV S+L+D Y + +A +F + + L
Sbjct: 1043 AHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF--- 1099
Query: 236 QSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNE 295
++ +I GL +AL +F +M E++ PN VT+ S+ +G + + +
Sbjct: 1100 -CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRS 1158
Query: 296 M-HSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
M + NV Y ++ K + A+ LI M+ + PN + LLDG
Sbjct: 1159 MIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDGCRIHK 1215
Query: 355 RLKDAQEVFQDLLI 368
L A+ F L++
Sbjct: 1216 NLVIAEIAFNKLMV 1229
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 17/242 (7%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P II + + K Y AI++ +M ++PD T + +I+ HLG +
Sbjct: 993 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1052
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGK-------------LAQPDVVMYSTIIDSLCKDK 109
V + G+ D + ++ + K L + ++ +++II+ L
Sbjct: 1053 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1112
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTF 168
+A ++++M + + P+ VT+ ++ + G + E + M+ SI +V +
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 1172
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
+V K G + EA ++ M +P+ V + +L+DG + + AE FN +
Sbjct: 1173 GGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV 1229
Query: 229 ME 230
+E
Sbjct: 1230 LE 1231
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 190/436 (43%), Gaps = 35/436 (8%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
+K L + +A+ L M F + P+ N ++C G I AF+V +
Sbjct: 110 LSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMR 169
Query: 70 K-------------------RGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKL 110
K +G + F + + + + DVV+Y+T I SLC
Sbjct: 170 KKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAI-SLCGR-- 226
Query: 111 VNDAYNLYSEMLAKRISPD-----VVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
+N+ Y +E + + + D +TY+ L+S F G+ + A+ + ++MV I+
Sbjct: 227 INNVYE--TERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRE 284
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
++ A KE K A + M+K G KP++V ++L++ +V +++
Sbjct: 285 DAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSV 344
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP-NVVTYSSLIDGLCKSG 284
+ + PD +++ ++ L K +D L LF + +EN+ N Y++ + K G
Sbjct: 345 LKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLG 404
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
A +L+ EM GL + +Y+ ++ A K+ A+ + + M + PN +TY
Sbjct: 405 YWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYL 464
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
L+ C G L D E D+L K DV Y I+G+C F A L KM +
Sbjct: 465 SLVRS-CIWGSLWDEVE---DIL-KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREM 519
Query: 405 GCTPNAVTYEIIIYAL 420
G P+ T +++ L
Sbjct: 520 GLEPDGKTRAMMLQNL 535
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 23/251 (9%)
Query: 15 TSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQ 74
++ K + + A+ + Q M + + P+L N LIN G++ F V + G++
Sbjct: 292 SACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK 351
Query: 75 PDTITFNTIIKIQGKLAQPDVVM------------------YSTIIDSLCKDKLVNDAYN 116
PD T+N ++ K + + V+ Y+T + S K A
Sbjct: 352 PDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVK 411
Query: 117 LYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALC 176
L EM ++ +Y +IS + K A+ + M + P+ +T+ LV +
Sbjct: 412 LLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCI 471
Query: 177 KEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ 236
E +++L + +PDV Y++ + G CL E A++++ M M L PD +
Sbjct: 472 WGSLWDEVEDILKKV-----EPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGK 526
Query: 237 SYSIMINGLCK 247
+ ++M+ L K
Sbjct: 527 TRAMMLQNLKK 537
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 179/445 (40%), Gaps = 98/445 (22%)
Query: 56 GQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQP-----------------DVVMY 98
G+ A + NI + G + D F++++K+ L DV +
Sbjct: 72 GRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVG 131
Query: 99 STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVL 158
++++D+ K D ++ EM + +VVT+TTLISG+ E + L +M
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEVLTLFMRMQN 187
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
+ P+ +TF+ + L +EG V V++K G + +SL++ Y V K
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH---------------- 262
A +F+ V +++ MI+G + +AL +F M
Sbjct: 248 ARILFDKTE----VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 263 ----------TENITPNVVTYSSLID---------GLCKSGRISDAWELVNEMHSRGLPP 303
TE + +VV Y L D K + DA L E+ G
Sbjct: 304 LCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI---GCVG 360
Query: 304 NVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI------------------ 345
NV+++++++ +N + A+ L +MK +G+ PN +TY++
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 346 -------------LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
LLD K G++++A +VF + K D+ ++ M+ G + G +
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYAQTGETE 476
Query: 393 EALALMSKMEDNGCTPNAVTYEIII 417
A+ + ++ G PN T+ I+
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSIL 501
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 178/415 (42%), Gaps = 74/415 (17%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQ--------PDV 95
T+N +I+ Y G A + ++ + +F ++IK+ L + V
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 96 VMYSTIIDSLCKDKLVNDAYNLYSEML-AKRISPD------VVTYTTLISGFCIVGQLKE 148
V Y + D + L+ AY+ + ML A R+ + VV++T +ISGF +E
Sbjct: 322 VKYGFLFDQNIRTALMV-AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 149 AVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMD 208
AV L ++M K + P+ +T+S+++ AL V V A ++K + ++L+D
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLD 436
Query: 209 GYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP 268
Y + +V +A +F+ +DD
Sbjct: 437 AYVKLGKVEEAAKVFSG-------------------------IDD--------------K 457
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
++V +S+++ G ++G A ++ E+ G+ PN T+SS+L+ +C NA S+
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN-VCA---ATNA-SMG 512
Query: 329 KKMKHQGIL------PNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMI 382
+ + G ++ + LL K G ++ A+EVF+ K D+ ++ MI
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK----DLVSWNSMI 568
Query: 383 NGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
+G + G +AL + +M+ + VT+ + A G ++ EK M+
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLD---ALCKNHHVDNAISLI 328
+Y SL+ G + GR +A L +H G+ + +SS+L LC L
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE--------LF 111
Query: 329 KKMKH-----QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMIN 383
+ H G L +V T L+D KG KD ++VF ++ + +V T+T +I+
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLIS 167
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
G ++ + DE L L +M++ G PN+ T+ + L ++G + ++ ++ GL
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/464 (18%), Positives = 191/464 (41%), Gaps = 54/464 (11%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
++ + + ++ A+ L +M + V P+ FT+++++ + S V
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHA 417
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQ-------------PDVVMYSTIIDSLCKDKLVND 113
+ K Y+ + ++ KL + D+V +S ++ +
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 114 AYNLYSEMLAKRISPDVVTYTTLISGFCI-----VGQLKEAVGLLNQMVLKSINPDVYTF 168
A ++ E+ I P+ T++++++ C +GQ K+ G + ++ +
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILN-VCAATNASMGQGKQFHGF---AIKSRLDSSLCVS 533
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
S L+ K+G ++ A+ V K + D+V+++S++ GY + KA D+F M +
Sbjct: 534 SALLTMYAKKGNIESAEEVF----KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK 589
Query: 229 MELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE-NITPNVVTYSSLIDGLCKSGRIS 287
++ D ++ + +V++ F M + I P S ++D ++G++
Sbjct: 590 RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLE 649
Query: 288 DAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDN----AISLIKKMKHQG-----ILP 338
A +++ M + P + ++L A C+ H A I MK + +L
Sbjct: 650 KAMKVIENMPN---PAGSTIWRTIL-AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLC---KDGLFDEAL 395
N+Y + K +L + + V ++ + +TY+ + KD ++ +
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
L ++++D G P+ +Y + Q D++ E +L Q R
Sbjct: 766 DLSTRLKDLGYEPD-TSY------VLQDIDDEHKEAVLAQHSER 802
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 8/246 (3%)
Query: 159 KSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK 218
KS D ++ L+ ++G+ +EAK + + + G + D +SS++ + +
Sbjct: 52 KSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF 111
Query: 219 AEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLID 278
+ + DV + +++ K D +F +M NVVT+++LI
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLIS 167
Query: 279 GLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
G ++ + L M + G PN T+++ L L + + + + G+
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
+ L++ K G ++ A+ +F +K V T+ MI+G +GL EAL +
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGMF 283
Query: 399 SKMEDN 404
M N
Sbjct: 284 YSMRLN 289
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 166/347 (47%), Gaps = 2/347 (0%)
Query: 97 MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQM 156
+Y +I S + + DA +Y+ + ++ +T+I + ++G+ EA L +
Sbjct: 525 LYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNL 584
Query: 157 VLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCLVNE 215
+ D FSI+V K G ++EA +VL +M + + PDV + ++ Y +
Sbjct: 585 KSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDL 644
Query: 216 VNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSS 275
+K + ++ + + + + + Y+ +IN + +D+ F++M TPN VT++
Sbjct: 645 QDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNV 704
Query: 276 LIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQG 335
L+D K+ EL G+ +VI+Y++++ A KN N S IK M+ G
Sbjct: 705 LLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDG 763
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEAL 395
++ Y LLD K +++ + + + + D TY IMIN + G DE
Sbjct: 764 FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVA 823
Query: 396 ALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
++ +++++G P+ +Y +I A G ++A L+++M R ++
Sbjct: 824 DVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 154/337 (45%), Gaps = 19/337 (5%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKI---QGKLAQ----- 92
+L + +I+ Y +G+ + A + N+ G D I F+ ++++ G L +
Sbjct: 557 NLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVL 616
Query: 93 ----------PDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
PDV ++ ++ K L + +LY + I + Y +I+
Sbjct: 617 EIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCAR 676
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
L E G +M+ P+ TF++L+D K K+ + N L ++ K DV++
Sbjct: 677 ALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGK-AKLFKKVNELFLLAKRHGVVDVIS 735
Query: 203 YSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMH 262
Y++++ Y + M + +++Y+ +++ K K ++ ++ K+M
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVD 322
P+ TY+ +I+ + G I + +++ E+ GL P++ +Y++L+ A V+
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 323 NAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDA 359
A+ L+K+M+ + I+P+ TYT L+ L + +A
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 143/320 (44%), Gaps = 25/320 (7%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIF--KRGYQPDTITFNTIIKIQGKLAQPDV 95
V+ D F+I++ Y G + A SVL I ++ PD F +++I K D
Sbjct: 589 VVLDRIGFSIVVRMYVKAGSLEEACSVL-EIMDEQKDIVPDVYLFRDMLRIYQKCDLQDK 647
Query: 96 V-----------------MYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
+ MY+ +I+ + +++ + EM+ +P+ VT+ L+
Sbjct: 648 LQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD 707
Query: 139 GFCIVGQLK--EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGE 196
+ G+ K + V L + + DV +++ ++ A K + + M G
Sbjct: 708 ---VYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGF 764
Query: 197 KPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALN 256
+ Y++L+D Y ++ K I M + PD +Y+IMIN + +D+ +
Sbjct: 765 SVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAD 824
Query: 257 LFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALC 316
+ K++ + P++ +Y++LI G + +A LV EM R + P+ +TY++L+ AL
Sbjct: 825 VLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALR 884
Query: 317 KNHHVDNAISLIKKMKHQGI 336
+N AI MK GI
Sbjct: 885 RNDEFLEAIKWSLWMKQMGI 904
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 190/426 (44%), Gaps = 60/426 (14%)
Query: 65 LCNI--FKRGYQPDTITFNTII-----KIQGKLA------------QPDVVMYSTIIDSL 105
LC F++ YQ FNT+I K KLA +P+V ++
Sbjct: 200 LCGFHEFQKSYQ----VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLY 255
Query: 106 CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
K+ V +A +S M I + Y+++I+ + + +A +++ M + +
Sbjct: 256 QKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKL 314
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
+ ++++A ++GK++ A+++L M G P+++ Y++L+ GY + ++ A+ +F+
Sbjct: 315 ENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHR 374
Query: 226 MTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLI-------- 277
+ + L PD SY MI G + ++A + ++++ PN +LI
Sbjct: 375 LCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGD 434
Query: 278 -DGLCKS---------------GRISDAWELVNEM-----------HSRGLPPNVITYSS 310
DG K+ G I A+E V ++ H+ + N ++SS
Sbjct: 435 RDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNH-IRLNQTSFSS 493
Query: 311 LLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKG 370
L+ A K+ VD+ + L+++ K + + Y +L+ + G+L DA +++ +
Sbjct: 494 LVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESD 553
Query: 371 YNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAE 430
+++ + MI+ G F EA L ++ +G + + + I++ + G ++A
Sbjct: 554 EEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEAC 613
Query: 431 KLLRQM 436
+L M
Sbjct: 614 SVLEIM 619
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 174/427 (40%), Gaps = 21/427 (4%)
Query: 10 FNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIF 69
++ T + + Y A + M RV L + +++N Y G++ A S+L ++
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 70 KRGYQPDTITFNTIIKIQGKL-----------------AQPDVVMYSTIIDSLCKDKLVN 112
G+ P+ I +NT+I GK+ +PD Y ++I+ +
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 113 DAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYT-FSIL 171
+A + Y E+ P+ TLI+ G A+ + M I + I+
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMT--GIGCQYSSILGII 459
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
+ A K GK+ VL + + ++SSL+ Y V+ + +
Sbjct: 460 LQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDS 519
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWE 291
A + Y ++I + + DA+ ++ + N+ S++ID G S+A +
Sbjct: 520 AFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEK 579
Query: 292 LVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ-GILPNVYTYTILLDGL 350
L + S G+ + I +S ++ K ++ A S+++ M Q I+P+VY + +L
Sbjct: 580 LYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIY 639
Query: 351 CKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
K Q ++ + G + + Y +IN + DE +M G TPN
Sbjct: 640 QKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNT 699
Query: 411 VTYEIII 417
VT+ +++
Sbjct: 700 VTFNVLL 706
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 7 IIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLC 66
+I +N + K K Y S + M F L +N L++ Y Q+ S+L
Sbjct: 733 VISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK 792
Query: 67 NIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRI 126
+ K PD T+N +I I G+ D V ++ E+ +
Sbjct: 793 RMKKSTSGPDHYTYNIMINIYGEQGWIDEVA------------------DVLKELKESGL 834
Query: 127 SPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEA 184
PD+ +Y TLI + I G ++EAVGL+ +M ++I PD T++ LV AL + + EA
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 6/215 (2%)
Query: 230 ELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPNVVTYSSLIDGLCKSGRISD 288
+L + +YS+++ L + + D A +L K++ + ++++I K G +
Sbjct: 169 KLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKL 228
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGIL-PNVYTYTILL 347
A + + M G+ PNV T L+ KN +V+ A M+ GI+ + Y+ I +
Sbjct: 229 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITI 288
Query: 348 DGLCKGGRLKDAQEVFQDLLIKGY-NLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGC 406
RL D E DL+ + L + + +M+N + G + A +++ ME G
Sbjct: 289 YTRL---RLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGF 345
Query: 407 TPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+PN + Y +I + + A+ L ++ GL
Sbjct: 346 SPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGL 380
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 161/334 (48%), Gaps = 28/334 (8%)
Query: 94 DVVMYSTIIDSLCKD-KLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGL 152
+ + +++++ + KD + +A+ L+ E+ PD +Y ++S + ++A
Sbjct: 91 NTITWNSLLIGISKDPSRMMEAHQLFDEI----PEPDTFSYNIMLSCYVRNVNFEKAQSF 146
Query: 153 LNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCL 212
++M K D +++ ++ + G++++A+ + M++ E V++++++ GY
Sbjct: 147 FDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMMEKNE----VSWNAMISGYIE 198
Query: 213 VNEVNKAEDIFNTMTRMELAP--DVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNV 270
++ KA F ++AP V +++ MI G K K V+ A +FK M + N+
Sbjct: 199 CGDLEKASHFF------KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM---TVNKNL 249
Query: 271 VTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKK 330
VT++++I G ++ R D +L M G+ PN SS L + + + +
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 331 MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGL 390
+ + +V T L+ CK G L DA ++F+ + K DV + MI+G + G
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGN 365
Query: 391 FDEALALMSKMEDNGCTPNAVTYEIIIYALFQKG 424
D+AL L +M DN P+ +T+ ++ A G
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 185/429 (43%), Gaps = 78/429 (18%)
Query: 42 LFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTII--------------KIQ 87
+F N +I G I A V + + +TIT+N+++ ++
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLF 116
Query: 88 GKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK 147
++ +PD Y+ ++ ++ A + + M K D ++ T+I+G+ G+++
Sbjct: 117 DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEME 172
Query: 148 EAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLM 207
+A L M+ K + +++ ++ + G +++A + V G VV +++++
Sbjct: 173 KARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMI 224
Query: 208 DGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENIT 267
GY +V AE +F MT + ++ +++ MI+G + +D L LF+ M E I
Sbjct: 225 TGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 268 PN-----------------------------------VVTYSSLIDGLCKSGRISDAWEL 292
PN V +SLI CK G + DAW+L
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 293 VNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCK 352
M + +V+ +++++ ++ + D A+ L ++M I P+ T+ +L
Sbjct: 342 FEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397
Query: 353 GGRLKDAQEVFQDLLIKGYNLDVRT--YTIMINGLCKDGLFDEALALMSKMEDNGCTPNA 410
G + F+ +++ Y ++ + YT M++ L + G +EAL L+ M P+A
Sbjct: 398 AGLVNIGMAYFES-MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP---FRPHA 453
Query: 411 VTYEIIIYA 419
+ ++ A
Sbjct: 454 AVFGTLLGA 462
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 162/349 (46%), Gaps = 32/349 (9%)
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI-VGQLKEAV 150
Q + + II + ++ A ++ M AK + +T+ +L+ G ++ EA
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAH 113
Query: 151 GLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGY 210
L +++ PD ++++I++ + ++A++ M D ++++++ GY
Sbjct: 114 QLFDEIP----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGY 165
Query: 211 CLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITP-- 268
E+ KA ++F +M + + S++ MI+G + ++ A + FK + P
Sbjct: 166 ARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFK------VAPVR 215
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLI 328
VV ++++I G K+ ++ A + +M + N++T+++++ +N ++ + L
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDM---TVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 329 KKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKD 388
+ M +GI PN + L G + L+ +++ Q + DV T +I+ CK
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC 332
Query: 389 GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
G +A L M+ + V + +I Q G+ DKA L R+MI
Sbjct: 333 GELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMI 377
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 194/421 (46%), Gaps = 40/421 (9%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGY----QPDTITFNTIIKIQ-------- 87
P+ + N +I L + +A S+ ++++ + +PDT TF ++KI
Sbjct: 76 PNTYLHNTMIRALSLLDE-PNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWF 134
Query: 88 GKLAQPDVVMY---------STIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLIS 138
G+ VV++ + +I + DA ++ EML K DV + L++
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK----DVNVWNALLA 190
Query: 139 GFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKP 198
G+ VG++ EA LL M N +++ ++ K G+ EA V M+ +P
Sbjct: 191 GYGKVGEMDEARSLLEMMPCWVRNE--VSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 199 DVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF 258
D VT +++ + + E I + + + V + +I+ K + AL++F
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 259 KQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKN 318
+ ++ N VVT++++I GL G ++A + N M G+ PN +T+ ++L A
Sbjct: 309 ECVNERN----VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHV 364
Query: 319 HHVDNAISLIKKMKHQ-GILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
VD L M+ + GI PN+ Y ++D L + G+L++A EV + + K N +
Sbjct: 365 GWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA-NAAIWG 423
Query: 378 YTIMINGLCKD-GLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
+ + + D L + AL+ + K+E N N+ Y ++ G D++ +++R M
Sbjct: 424 SLLAASNVHHDLELGERALSELIKLEPN----NSGNYMLLANLYSNLGRWDES-RMMRNM 478
Query: 437 I 437
+
Sbjct: 479 M 479
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 101/237 (42%), Gaps = 17/237 (7%)
Query: 8 IEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCN 67
+ + + K+ + AI + Q+M V PD T +++ LG + +
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 68 IFKRGYQPDTITFNTIIKIQGK-------------LAQPDVVMYSTIIDSLCKDKLVNDA 114
+ RG N +I + K + + +VV ++TII L +A
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEA 335
Query: 115 YNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTFSILVD 173
+++ M+ + P+ VT+ ++S VG + L N M K I+P++ + ++D
Sbjct: 336 LAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID 395
Query: 174 ALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
L + GK++EA V+ M K + + SL+ + +++ E + + ++E
Sbjct: 396 LLGRAGKLREADEVIKSM---PFKANAAIWGSLLAASNVHHDLELGERALSELIKLE 449
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 128/325 (39%), Gaps = 54/325 (16%)
Query: 156 MVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNE 215
M++ +N D + ++A G ++ A +V P+ +++++ L++E
Sbjct: 38 MIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQ----PCPNTYLHNTMIRALSLLDE 93
Query: 216 VNKAEDIFNTMTRMELA----PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVV 271
N A I T+ R A PD ++ ++ ++ V + Q+ +V
Sbjct: 94 PN-AHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVH 152
Query: 272 TYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM 331
+ LI G + DA ++ +EM L +V +++LL K +D A SL++ M
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Query: 332 KHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLI----------------------- 368
+ N ++T ++ G K GR +A EVFQ +L+
Sbjct: 209 P--CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 369 ------------KGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
+G N V +I+ K G +AL + + + N VT+ I
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER----NVVTWTTI 322
Query: 417 IYALFQKGDNDKAEKLLRQMIARGL 441
I L G +A + +M+ G+
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGV 347
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 184/401 (45%), Gaps = 38/401 (9%)
Query: 38 VMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQ---GKLAQP- 93
V P T+ + Y LGQ + + K G + D+ NT++ + G L +
Sbjct: 122 VKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAW 181
Query: 94 ---------DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVG 144
DVV ++++I K L++ A NL+ EM + + V++ ++ISGF G
Sbjct: 182 RIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNG 237
Query: 145 QLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
+ K+A+ + +M K + PD +T L++A G ++ + + +++ + + + +
Sbjct: 238 RFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVT 297
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQ--SYSIMINGLCKIKMVDDALNLFKQMH 262
+L+D YC + + ++F E AP Q ++ MI GL + A++LF ++
Sbjct: 298 ALIDMYCKCGCIEEGLNVF------ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELE 351
Query: 263 TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PPNVITYSSLLDALCKNHHV 321
+ P+ V++ ++ SG + A E M + + P++ Y+ +++ L +
Sbjct: 352 RSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLL 411
Query: 322 DNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT-YTI 380
+ A +LIK M + + ++ LL K G ++ A+ + L K + D Y +
Sbjct: 412 EEAEALIKNMP---VEEDTVIWSSLLSACRKIGNVEMAKRAAKCL--KKLDPDETCGYVL 466
Query: 381 MINGLCKDGLFDEALALMSKMEDN------GCTPNAVTYEI 415
+ N GLF+EA+ M++ GC+ V +E+
Sbjct: 467 LSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEV 507
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 119/280 (42%), Gaps = 23/280 (8%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P + +N + V+ + A+ + ++M + V PD FT L+N +LG
Sbjct: 219 PQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGR 278
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGKLA-------------QPDVVMYSTIIDSLCKDK 109
+ I + ++ ++I +I + K + + ++++I L +
Sbjct: 279 WIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNG 338
Query: 110 LVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYTF 168
A +L+SE+ + PD V++ +++ G++ A M K I P + +
Sbjct: 339 FEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHY 398
Query: 169 SILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTR 228
+++V+ L G ++EA+ ++ M + D V +SSL+ + V A+ + +
Sbjct: 399 TLMVNVLGGAGLLEEAEALIKNMPV---EEDTVIWSSLLSACRKIGNVEMAKRAAKCLKK 455
Query: 229 MELAPD-VQSYSIMINGLCKIKMVDDALN---LFKQMHTE 264
++ PD Y ++ N + ++A+ L K+ E
Sbjct: 456 LD--PDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQME 493
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/483 (20%), Positives = 206/483 (42%), Gaps = 63/483 (13%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P ++ +NK SL K + ++L ++ + + PD FT +++ L ++
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 64 VLCNIFKRGYQPDTITFNTII-------------KIQGKLAQPDVVMYSTIIDSLCKDKL 110
V K G + D+ N+++ K+ ++ Q DVV ++ +I S +
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Query: 111 VNDAYNLYSEM---------------------------LAKRISPDVVTY--------TT 135
DA ++ M + +RI VVT
Sbjct: 128 FEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNA 187
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
L+ FC G L +A + + M + +V ++ +V G++ EA+ V+ +
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMR----DKNVKCWTSMVFGYVSTGRIDEAR----VLFERS 239
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
DVV ++++M+GY N ++A ++F M + PD ++ G + ++
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDAL 315
+ ++ +T + V ++L+D K G I A E+ E+ R + +++SL+ L
Sbjct: 300 WIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIYGL 355
Query: 316 CKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDV 375
N A+ L +M++ G+ + T+ +L GG + + +++F + + +N+
Sbjct: 356 AMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTER-HNVQP 414
Query: 376 RTY--TIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLL 433
++ + +I+ LC+ GL DEA L+ KM Y ++ A G+ AE++
Sbjct: 415 KSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVA 474
Query: 434 RQM 436
++
Sbjct: 475 EKL 477
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/416 (18%), Positives = 160/416 (38%), Gaps = 78/416 (18%)
Query: 90 LAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEA 149
L P ++MY+ ++ SL K L+ E+ + + PD T ++ + ++ E
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 150 VGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDG 209
+ V + D Y + L+ GK++ V M + DVV+++ L+
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEM----PQRDVVSWNGLISS 121
Query: 210 YCLVNEVNKAEDIFNTMTR-----------------------MELAPDVQSYSI------ 240
Y A +F M++ +E+ + + +
Sbjct: 122 YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS 181
Query: 241 ------MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVN 294
+++ CK +D A +F M +N+ ++S++ G +GRI +A
Sbjct: 182 VRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDEA----R 233
Query: 295 EMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGG 354
+ R +V+ ++++++ + + D A+ L + M+ GI P+ + LL G + G
Sbjct: 234 VLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTG 293
Query: 355 RLKDAQ--------------EVFQDLLIKGY-----------------NLDVRTYTIMIN 383
L+ + +V L+ Y D ++T +I
Sbjct: 294 ALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIY 353
Query: 384 GLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIAR 439
GL +G+ AL L +ME+ G +A+T+ ++ A G + K+ M R
Sbjct: 354 GLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTER 409
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 138/315 (43%), Gaps = 14/315 (4%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
DVV+++ +++ + ++A L+ M I PD +L++G G L++ +
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+ + D + LVD K G ++ A V + ++ D +++SL+ G +
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI----KERDTASWTSLIYGLAMN 358
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM-HTENITPNVVT 272
+A D++ M + + D ++ ++ V + +F M N+ P
Sbjct: 359 GMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEH 418
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
S LID LC++G + +A EL+++M V Y SLL A +V A + +K++
Sbjct: 419 CSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLE 478
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTY----TIMINGLCKD 388
+ + +T+L R +D V + K +L +R + +I I+G+ +
Sbjct: 479 KVEV-SDSSAHTLLASVYASANRWEDVTNVRR----KMKDLGIRKFPGCSSIEIDGVGHE 533
Query: 389 GLFDEALALMSKMED 403
+ + L KM++
Sbjct: 534 FIVGDDLLSHPKMDE 548
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 168/377 (44%), Gaps = 36/377 (9%)
Query: 76 DTITFNTIIKIQG-------KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP 128
D TFN + G ++ P++ +++ +I + A+ Y++ML RI P
Sbjct: 56 DDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWP 115
Query: 129 DVVTYTTLISGF----CI-VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKE 183
D +T+ LI C+ VG+ + Q+V DVY + LV G +
Sbjct: 116 DNITFPFLIKASSEMECVLVGEQTHS-----QIVRFGFQNDVYVENSLVHMYANCGFIAA 170
Query: 184 AKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMIN 243
A + M G + DVV+++S++ GYC V A ++F+ M L ++SIMIN
Sbjct: 171 AGRIFGQM---GFR-DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF----TWSIMIN 222
Query: 244 GLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRI---SDAWELVNEMHSRG 300
G K + A++LF+ M E + N S+I G + A+E V + H
Sbjct: 223 GYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH--- 279
Query: 301 LPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQ 360
+ N+I ++L+D + ++ AI + + + L +++ ++ GL G A
Sbjct: 280 MTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL----SWSSIIKGLAVHGHAHKAM 335
Query: 361 EVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKM-EDNGCTPNAVTYEIIIYA 419
F ++ G+ T+T +++ GL ++ L + M +D+G P Y I+
Sbjct: 336 HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Query: 420 LFQKGDNDKAEKLLRQM 436
L + G +AE + +M
Sbjct: 396 LGRAGKLAEAENFILKM 412
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 161/344 (46%), Gaps = 22/344 (6%)
Query: 40 PDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIK--------IQGKLA 91
P+LF FN+LI C+ + + AF + K PD ITF +IK + G+
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 92 QPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISP-----DVVTYTTLISGFCIVGQL 146
+V + D ++ LV+ N A RI DVV++T++++G+C G +
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMV 199
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSL 206
+ A + ++M + +++T+SI+++ K ++A ++ M + G + S+
Sbjct: 200 ENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 207 MDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENI 266
+ + + E + + + + ++ + +++ + ++ A+++F+ +
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL----P 311
Query: 267 TPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAIS 326
+ +++SS+I GL G A ++M S G P +T++++L A V+ +
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 327 LIKKMKH-QGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIK 369
+ + MK GI P + Y ++D L + G+L +A+ + +K
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK 415
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 171/414 (41%), Gaps = 26/414 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
+P + FN + A QM R+ PD TF LI + +
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 64 VLCNIFKRGYQPDTITFNTII-------------KIQGKLAQPDVVMYSTIIDSLCKDKL 110
I + G+Q D N+++ +I G++ DVV +++++ CK +
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGM 198
Query: 111 VNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSI 170
V +A ++ EM + ++ T++ +I+G+ ++A+ L M + + +
Sbjct: 199 VENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 171 LVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRME 230
++ + G ++ + ++K +++ ++L+D + ++ KA +F +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE-- 312
Query: 231 LAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAW 290
D S+S +I GL A++ F QM + P VT+++++ G +
Sbjct: 313 --TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 291 ELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDG 349
E+ M G+ P + Y ++D L + + A + I KM + PN LL G
Sbjct: 371 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH---VKPNAPILGALL-G 426
Query: 350 LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED 403
CK + + E ++LIK Y ++ N G +D+ +L M++
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 152/338 (44%), Gaps = 25/338 (7%)
Query: 105 LCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPD 164
L + L++D + + S +LA + T + G+ A G+ +Q+ NP+
Sbjct: 35 LLRTHLISDVF-VASRLLALCVDDSTFNKPTNLLGY--------AYGIFSQIQ----NPN 81
Query: 165 VYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFN 224
++ F++L+ + +A M+K PD +T+ L+ + V E +
Sbjct: 82 LFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHS 141
Query: 225 TMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSG 284
+ R DV + +++ + A +F QM + VV+++S++ G CK G
Sbjct: 142 QIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD----VVSWTSMVAGYCKCG 197
Query: 285 RISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYT 344
+ +A E+ +EM R N+ T+S +++ KN+ + AI L + MK +G++ N
Sbjct: 198 MVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 345 ILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
++ G L+ + ++ ++ +++ T +++ + G ++A+ + + +
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
+++++ II L G KA QMI+ G +
Sbjct: 314 ----DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI 347
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 233 PDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWEL 292
P++ ++++I A + QM I P+ +T+ LI + S E
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI-------KASSEMEC 132
Query: 293 V---NEMHSR----GLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
V + HS+ G +V +SL+ + A + +M + +V ++T
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR----DVVSWTS 188
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
++ G CK G +++A+E+F ++ + ++ T++IMING K+ F++A+ L M+ G
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGLFYAT 449
N +I + G + E+ ++ + L T
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGT 288
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 152/333 (45%), Gaps = 36/333 (10%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGY-QPDTITFNTIIKIQGKLAQPDV--VM 97
++F +N LI Y +G SAFS+ + G +PDT T+ +IK +A + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 98 YSTIIDSL-----------------CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGF 140
+S +I S C D V AY ++ +M K D+V + ++I+GF
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGD--VASAYKVFDKMPEK----DLVAWNSVINGF 197
Query: 141 CIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDV 200
G+ +EA+ L +M K I PD +T L+ A K G + K V MIK G ++
Sbjct: 198 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Query: 201 VTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQ 260
+ + L+D Y V +A+ +F+ M + + S++ +I GL +A+ LFK
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAIELFKY 313
Query: 261 MH-TENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSR-GLPPNVITYSSLLDALCKN 318
M TE + P +T+ ++ G + + +E M + P + + ++D L +
Sbjct: 314 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 319 HHVDNAISLIKKMKHQGILPNVYTYTILLDGLC 351
V A IK M Q PNV + LL G C
Sbjct: 374 GQVKKAYEYIKSMPMQ---PNVVIWRTLL-GAC 402
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 53/314 (16%)
Query: 129 DVVTYTTLISGFCIVGQLKEAVGLLNQMVLKS-INPDVYTFSILVDALCKEGKVKEAKNV 187
+V + TLI G+ +G A L +M + + PD +T+ L+ A+ V+ + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
+V+I+ G + +SL+ Y +V A +F+ M +L
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL---------------- 187
Query: 248 IKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVIT 307
V ++S+I+G ++G+ +A L EM+S+G+ P+ T
Sbjct: 188 -----------------------VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 308 YSSLLDALCKNHHVDNAISLIKK----MKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF 363
SLL A K A++L K+ M G+ N+++ +LLD + GR+++A+ +F
Sbjct: 225 IVSLLSACAK----IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 364 QDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMED-NGCTPNAVTYEIIIYALFQ 422
+++ K + ++T +I GL +G EA+ L ME G P +T+ I+YA
Sbjct: 281 DEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 423 KGDNDKAEKLLRQM 436
G + + R+M
Sbjct: 337 CGMVKEGFEYFRRM 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 5/178 (2%)
Query: 269 NVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-PPNVITYSSLLDALCKNHHVDNAISL 327
NV +++LI G + G A+ L EM GL P+ TY L+ A+ V ++
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 328 IKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCK 387
+ G +Y LL G + A +VF + K D+ + +ING +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFAE 199
Query: 388 DGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
+G +EALAL ++M G P+ T ++ A + G +++ MI GL L
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 257
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 115/275 (41%), Gaps = 21/275 (7%)
Query: 3 PSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAF 62
P ++ +N + A++L +M+ + + PD FT L++ +G +T
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 63 SVLCNIFKRGYQPDTITFNTIIKIQGK-------------LAQPDVVMYSTIIDSLCKDK 109
V + K G + + N ++ + + + + V ++++I L +
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 110 LVNDAYNLYSEMLAKR-ISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLK-SINPDVYT 167
+A L+ M + + P +T+ ++ G +KE +M + I P +
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 168 FSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMT 227
F +VD L + G+VK+A + M +P+VV + +L+ + + + AE F +
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPM---QPNVVIWRTLLGACTVHGDSDLAE--FARIQ 417
Query: 228 RMELAPDVQS-YSIMINGLCKIKMVDDALNLFKQM 261
++L P+ Y ++ N + D + KQM
Sbjct: 418 ILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 175/382 (45%), Gaps = 39/382 (10%)
Query: 44 TFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIID 103
++N + Y G+ AF + C + + ++PD TF I + P+ + +I
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF---INLAASCQNPETLTQGRLIH 279
Query: 104 S----LCKDKLVNDAYNLYSEMLAK-------RISPDV------VTYTTLISGFCIVGQL 146
S L D+ + +A N + M +K R+ D+ V++T +ISG+ G +
Sbjct: 280 SHAIHLGTDQDI-EAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 147 KEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVM-IKGGEKPDVVTYSS 205
EA+ L + M+ PD+ T L+ K G ++ K + A I G ++ +V+ ++
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 206 LMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN 265
L+D Y +++A DIF+ V +++ MI G + +AL LF +M +
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPE----KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Query: 266 ITPNVVTYSSLIDGLCKSGRISDAWELVNEMHS-RGLPPNVITYSSLLDALCKNHHVDNA 324
PN +T+ +++ SG + WE + M + P + YS ++D L + ++ A
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEA 514
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGR-LKDAQEVFQDLLIKGYNLD---VRTYTI 380
+ LI+ M + P+ + LL+ CK R +K A++ + L +NL+ Y
Sbjct: 515 LELIRNMSAK---PDAGIWGALLNA-CKIHRNVKIAEQAAESL----FNLEPQMAAPYVE 566
Query: 381 MINGLCKDGLFDEALALMSKME 402
M N G++D + S M+
Sbjct: 567 MANIYAAAGMWDGFARIRSIMK 588
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 184/454 (40%), Gaps = 53/454 (11%)
Query: 29 LSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPD----TITFNTII 84
L ++M P+ FTF + L + V ++ K + D T T + +
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 85 KIQG---------KLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTT 135
K ++ + D ++ ++ C+ + A++L+ EM I+PD VT T
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 136 LISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
LI LK + + ++ V + + K G + AK V + +G
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK-------- 247
VV+++S+ Y + E A ++ M R E PD+ ++ I + C+
Sbjct: 219 RT--VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF-INLAASCQNPETLTQG 275
Query: 248 -------IKMVDD----ALNLFKQMHTEN-------------ITPNVVTYSSLIDGLCKS 283
I + D A+N F M++++ + V+++ +I G +
Sbjct: 276 RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 284 GRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI-LPNVYT 342
G + +A L + M G P+++T SL+ K ++ + + G NV
Sbjct: 336 GDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMI 395
Query: 343 YTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKME 402
L+D K G + +A+++F + K V T+T MI G +G+F EAL L SKM
Sbjct: 396 CNALIDMYSKCGSIHEARDIFDNTPEK----TVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 403 DNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQM 436
D PN +T+ ++ A G +K + M
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIM 485
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 127/342 (37%), Gaps = 58/342 (16%)
Query: 145 QLKEAVG---------LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGG 195
Q++EAV L +M P+ +TF + A + V + V A +IK
Sbjct: 23 QIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSP 82
Query: 196 EKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDAL 255
DV ++ +D + N V+ A +F M D +++ M++G C+ D A
Sbjct: 83 FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAF 138
Query: 256 NLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGL-------------- 301
+LF++M ITP+ VT +LI +S + +L+ MH+ G+
Sbjct: 139 SLFREMRLNEITPDSVTVMTLI----QSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 302 -----------------------PPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILP 338
V++++S+ A +A L M + P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 339 NVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALM 398
++ T+ L L + + + G + D+ I+ K A L
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 399 SKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
M C V++ ++I +KGD D+A L MI G
Sbjct: 315 DIMTSRTC----VSWTVMISGYAEKGDMDEALALFHAMIKSG 352
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 135/262 (51%), Gaps = 13/262 (4%)
Query: 85 KIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIV- 143
+I+ + ++ + + + +I + K K A +Y ++L + P+ ++Y ++S F I+
Sbjct: 371 RIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILL 430
Query: 144 ------GQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEK 197
G + V LLN+M K + P ++ ++ A K + A + M+ GEK
Sbjct: 431 SAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEK 490
Query: 198 PDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIM---INGLCKIKMVDDA 254
P V++Y +L+ ++A ++N M ++ + P++ +Y+ M + G K ++D
Sbjct: 491 PTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLD-- 548
Query: 255 LNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDA 314
L K+M ++ I P+VVT++++I G ++G A+E + M S + PN ITY L++A
Sbjct: 549 -TLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEA 607
Query: 315 LCKNHHVDNAISLIKKMKHQGI 336
L + A L K +++G+
Sbjct: 608 LANDAKPRLAYELHVKAQNEGL 629
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 191/460 (41%), Gaps = 32/460 (6%)
Query: 4 SPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFS 63
P + +N ++ + + A + + M+ ++P++ T+N L+ Y G+ A
Sbjct: 184 GPNLFIYNSLLGAM---RGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALG 240
Query: 64 VLCNIFKRGYQPDTITFNTIIKIQGKL--AQPDVVMYSTIIDSLCKDKLVND-AYNLYSE 120
+L ++G++P+ IT++T + + ++ + + + + K ++ ND Y+ E
Sbjct: 241 ILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFE 300
Query: 121 MLA-----KRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDAL 175
+ RI V+ + LK LLN M + P L+ A
Sbjct: 301 FVKLENFIGRICYQVMRRWLVKDDNWTTRVLK----LLNAMDSAGVRPSREEHERLIWAC 356
Query: 176 CKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNK---AEDIFNTMTRMELA 232
+E K + + E+ ++ S L+ + K A +I+ +
Sbjct: 357 TREEHYIVGKELYKRI---RERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPE 413
Query: 233 PD-------VQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGR 285
P+ V ++I+++ K + + L +M + + P +++++ K+
Sbjct: 414 PNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASE 473
Query: 286 ISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTI 345
+ A ++ M G P VI+Y +LL AL K D A + M GI PN+Y YT
Sbjct: 474 TTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTT 533
Query: 346 LLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNG 405
+ L + + +++ KG V T+ +I+G ++GL A +M+
Sbjct: 534 MASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSEN 593
Query: 406 CTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLLTGL 445
PN +TYE++I AL ND +L ++ + GL
Sbjct: 594 VEPNEITYEMLIEAL----ANDAKPRLAYELHVKAQNEGL 629
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 131/314 (41%), Gaps = 13/314 (4%)
Query: 1 MRPSPPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITS 60
+RPS E + + + +HY L +++ R L N LI + +
Sbjct: 342 VRPSRE--EHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWA 399
Query: 61 AFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSE 120
A + ++ G +P+ +++ + V ++ ++ + K + L ++
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELV-----------VSHFNILLSAASKRGIWRWGVRLLNK 448
Query: 121 MLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGK 180
M K + P + ++ + A+ + MV P V ++ L+ AL K
Sbjct: 449 MEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKL 508
Query: 181 VKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSI 240
EA V MIK G +P++ Y+++ + N + + M + P V +++
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNA 568
Query: 241 MINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRG 300
+I+G + + A F +M +EN+ PN +TY LI+ L + A+EL + + G
Sbjct: 569 VISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEG 628
Query: 301 LPPNVITYSSLLDA 314
L + Y +++ +
Sbjct: 629 LKLSSKPYDAVVKS 642
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 46/347 (13%)
Query: 133 YTTLISGFCIVGQLKEAVGLLNQMVLKS------INPDVYTFSILVDALCKEGKVKEAKN 186
+ +I GF +LK AV +++ + K I P+++ ++ L+ A+ G EA+
Sbjct: 149 FCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG---EAEK 205
Query: 187 VLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLC 246
+L M + G P++VTY++LM Y E KA I + P+ +YS + L
Sbjct: 206 ILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTAL--LV 263
Query: 247 KIKMVDD--ALNLF---KQMHTENITPNVVTYSSLIDGLCKS---GRI-----------S 287
+M D AL F ++ + + N V Y + + GRI
Sbjct: 264 YRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKD 323
Query: 288 DAW-----ELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQ--GILPNV 340
D W +L+N M S G+ P+ + L+ A + H L K+++ + I +V
Sbjct: 324 DNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSV 383
Query: 341 YTYTILLDGLCKGGRLKDAQEVFQDLLIKG-------YNLDVRTYTIMINGLCKDGLFDE 393
+ I L G K + A E+++DLL +G Y L V + I+++ K G++
Sbjct: 384 CNHLIWLMG--KAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRW 441
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARG 440
+ L++KMED G P + ++ A + + A ++ + M+ G
Sbjct: 442 GVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNG 488
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 165/383 (43%), Gaps = 32/383 (8%)
Query: 88 GKLAQPDVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLK 147
G + P++ +Y++++ ++ + +A + +M + I P++VTY TL+ + G+
Sbjct: 180 GGVIGPNLFIYNSLLGAM---RGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFL 236
Query: 148 EAVGLLNQMVLKSI--NPDVYTFSILVDALCKEG----------KVKEAKNVLAVMIKGG 195
+A+G+L+ K NP Y+ ++LV ++G + K AK + +
Sbjct: 237 KALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYD 296
Query: 196 EKPDVVTYSSLMDGYC-------LV---NEVNKAEDIFNTMTRMELAPDVQSYSIMINGL 245
+ + V + + C LV N + + N M + P + + +I
Sbjct: 297 WEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWAC 356
Query: 246 CKIKMVDDALNLFKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNV 305
+ + L+K++ ++ + LI + K+ + A E+ ++ G PN
Sbjct: 357 TREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNN 416
Query: 306 ITY-------SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
++Y + LL A K + L+ KM+ +G+ P + +L K
Sbjct: 417 LSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTA 476
Query: 359 AQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIY 418
A ++F+ ++ G V +Y +++ L K L+DEA + + M G PN Y +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 419 ALFQKGDNDKAEKLLRQMIARGL 441
L + + + LL++M ++G+
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGI 559
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 235 VQSYSIMINGLCKIKMVDDAL---NLFKQMHTEN---ITPNVVTYSSLIDGLCKSGRISD 288
+Q + MI G K K + A+ + K+ +E+ I PN+ Y+SL+ + G +
Sbjct: 146 LQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG---E 202
Query: 289 AWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLD 348
A +++ +M G+ PN++TY++L+ + A+ ++ K +G PN TY+
Sbjct: 203 AEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYST--- 259
Query: 349 GLCKGGRLKD---AQEVFQDLLIK----------GYNLDVR-----------TYTIMING 384
L R++D A E F +L K GY+ + Y +M
Sbjct: 260 ALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRW 319
Query: 385 LCKDGLF-DEALALMSKMEDNGCTPNAVTYEIIIYA 419
L KD + L L++ M+ G P+ +E +I+A
Sbjct: 320 LVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWA 355
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 163/369 (44%), Gaps = 54/369 (14%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
+ VMY++++ L ++ DA L+ M D V++ +I G G KEA+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 154 NQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLV 213
+M ++ + D Y F ++ A G + E K + A +I+ + + S+L+D YC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 214 NEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLF--------------- 258
++ A+ +F+ M + +V S++ M+ G + ++A+ +F
Sbjct: 319 KCLHYAKTVFDRMKQ----KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 259 ----------------KQMHTENITPNVVTY----SSLIDGLCKSGRISDAWELVNEMHS 298
Q H + IT ++ Y +SL+ K G I D+ L NEM+
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 299 RGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKD 358
R + +++++++ A + I L KM G+ P+ T T ++ + G ++
Sbjct: 435 R----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 359 AQEVFQDLLIKGYNL--DVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEII 416
Q F+ L+ Y + + Y+ MI+ + G +EA+ ++ M P+A+ + +
Sbjct: 491 GQRYFK-LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTL 546
Query: 417 IYALFQKGD 425
+ A KG+
Sbjct: 547 LSACRNKGN 555
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 150/349 (42%), Gaps = 55/349 (15%)
Query: 128 PDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNV 187
P+ Y ++ + ++ A + +++ P++++++ L+ A K G + E ++
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 188 LAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCK 247
+ D VT++ L++GY L V A +NTM R + + ++ ++M + K
Sbjct: 95 FEKL----PDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR-DFSANLTRVTLMT--MLK 147
Query: 248 IKMVDDALNLFKQMHTENI-----------TP------------------------NVVT 272
+ + ++L KQ+H + I +P N V
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 273 YSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMK 332
Y+SL+ GL G I DA +L RG+ + +++++++ L +N AI ++MK
Sbjct: 208 YNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 333 HQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFD 392
QG+ + Y + +L G + + +++ ++ + + + +I+ CK
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 393 EALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
A + +M+ N V++ ++ Q G ++A K+ M G+
Sbjct: 323 YAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 174/362 (48%), Gaps = 29/362 (8%)
Query: 84 IKIQGKLAQPDVVMYSTIIDSL-CKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCI 142
+ I L P V+ S++ID C+ K+V +N ++I +
Sbjct: 110 VAIDDILRYPFNVIVSSVIDECGCEKKVVGRFFN------------------SMIMVYSD 151
Query: 143 VGQLKEAVGLLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVT 202
G+ E V + M + D T ++ + L + +++ A++ ++M++ G DVVT
Sbjct: 152 NGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESG--IDVVT 209
Query: 203 YSSL---MDGYCLVNEVNKAEDIFNTMTRME-LAPDVQSYSIMINGLCKIKMVDDALNL- 257
SL + C E+ +A ++ M ++ + ++ ++ MI G C + + L+L
Sbjct: 210 VYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLV 268
Query: 258 FKQMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCK 317
K M E++ ++ +Y LIDG G++ +A LV MH + L Y+ +++ +
Sbjct: 269 LKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSR 328
Query: 318 NHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRT 377
V+ I L +M +G+ PN TY +L++GLCK G++ +A +L + + +D
Sbjct: 329 FGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEM 388
Query: 378 YTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMI 437
Y+ + + G+ D++L ++++M +G P A E + +LF+ N K ++L ++
Sbjct: 389 YSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEV--NRKEAQMLITIV 446
Query: 438 AR 439
+
Sbjct: 447 VK 448
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 123/263 (46%), Gaps = 41/263 (15%)
Query: 221 DIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL---I 277
++F M E+ D ++ ++ + L + ++ A + F M I +VVT SL +
Sbjct: 160 EVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGI--DVVTVYSLTVVV 217
Query: 278 DGLCKSGRISDAWELVNEMH-SRGLPPNVITYSSLLDALCKNHHVDNAISLIKKMKHQGI 336
LC +G I+ A ELV EM +G+ N++T+ S++ K + ++K M+ + +
Sbjct: 218 TVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESV 277
Query: 337 LPNVYTYTILLDGLCKGGRLKDAQ-----------------------------------E 361
+ ++ +Y +L+DG G++++A+ E
Sbjct: 278 MLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIE 337
Query: 362 VFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDNGCTPNAVTYEIIIYALF 421
++ ++ +G + TY +++NGLCK G EA++ ++++ N + Y + +
Sbjct: 338 LYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECY 397
Query: 422 QKGDNDKAEKLLRQMIARGLLTG 444
+ G DK+ +++ +MI G + G
Sbjct: 398 RVGMIDKSLEVVAEMIRDGFIPG 420
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 156/329 (47%), Gaps = 24/329 (7%)
Query: 7 IIEFNKFFTSLVKTKHYAT-AISLSQQMDFR-RVMPDLFTFNILINCYCHLGQITSAFSV 64
++ + T +K + AT AI+L +M + V P+ FTF+ +L V
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 65 LCNIFKRGYQPDTITFNTIIKIQGK-------------LAQPDVVMYSTIIDSLCKDKLV 111
L FKRG ++ N++I + K L++ ++V Y+T +D C++
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 112 NDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDVYTFSIL 171
A+ L SE+ + + T+ +L+SG VG +++ + +Q+V ++ + + L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 172 VDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNTMTRMEL 231
+ K G + A V M E +V++++S++ G+ + + FN M +
Sbjct: 516 ISMYSKCGSIDTASRVFNFM----ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571
Query: 232 APDVQSYSIMINGLCKIKMVDDALNLFKQMHTEN-ITPNVVTYSSLIDGLCKSGRISDAW 290
P+ +Y +++ + +V + F M+ ++ I P + Y+ ++D LC++G ++DA+
Sbjct: 572 KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAF 631
Query: 291 ELVNEMHSRGLPPNVITYSSLLDALCKNH 319
E +N M +V+ + + L A C+ H
Sbjct: 632 EFINTM---PFQADVLVWRTFLGA-CRVH 656
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 110/507 (21%), Positives = 202/507 (39%), Gaps = 99/507 (19%)
Query: 5 PPIIEFNKFFTSLVKTKHYATAISLSQQMDFRRVMPDLFTFNILINCYCHLGQITSAFSV 64
P + +N + K+ A A + + M R D+ +++ ++ CY + G+ A V
Sbjct: 95 PDSVLYNSLISLYSKSGDSAKAEDVFETMR-RFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 65 LCNIFKRGYQPDTITFNTIIKI--------QGKLA----------QPDVVMYSTIIDSLC 106
+ G P+ + +I+ G++ + DV + ++ID
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 107 K-DKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMVLKSINPDV 165
K + +AY ++ +M +VVT+T +I+ +G +EA+ MVL D
Sbjct: 214 KGENSFENAYKVFDKM----SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 166 YTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEVNKAEDIFNT 225
+T S + A + + K + + I+ G DV SL+D Y + +D
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKV 327
Query: 226 MTRMELAPDVQSYSIMINGLCK-IKMVDDALNLFKQMHTE-NITPNVVTYSS-------- 275
RME V S++ +I G K + +A+NLF +M T+ ++ PN T+SS
Sbjct: 328 FDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 276 ---------------------------LIDGLCKSGRISDAWELVNEMHSRGLPPNVITY 308
+I KS R+ DA + + N+++Y
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK----NLVSY 442
Query: 309 SSLLDALCKNHHVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDL-- 366
++ LD C+N + + A L+ ++ + + + +T+ LL G+ G ++ +++ +
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 367 ------------LIKGY-----------------NLDVRTYTIMINGLCKDGLFDEALAL 397
LI Y N +V ++T MI G K G L
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLET 562
Query: 398 MSKMEDNGCTPNAVTYEIIIYALFQKG 424
++M + G PN VTY I+ A G
Sbjct: 563 FNQMIEEGVKPNEVTYVAILSACSHVG 589
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 175/409 (42%), Gaps = 43/409 (10%)
Query: 42 LFTFNILINCY---CHLGQITSAFSVLCNIFKRGY-QPDTITFNTIIKIQGKLAQPDVVM 97
+ ++ LI Y C+L T A ++ + +G+ +P+ TF++ K G L+ P V
Sbjct: 336 VMSWTALITGYMKNCNLA--TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV-- 391
Query: 98 YSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLLNQMV 157
+ + + ++ + ++IS F ++++A Q
Sbjct: 392 ----------------GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDA-----QRA 430
Query: 158 LKSINP-DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYSSLMDGYCLVNEV 216
+S++ ++ +++ +D C+ ++A +L+ + + T++SL+ G V +
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 217 NKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTENITPNVVTYSSL 276
K E I + + ++ L+ + + +I+ K +D A +F M N V++++S+
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN----VISWTSM 546
Query: 277 IDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNAISLIKKM-KHQG 335
I G K G E N+M G+ PN +TY ++L A V M +
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 336 ILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDE-- 393
I P + Y ++D LC+ G L DA E + + L RT+ G C+ E
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL----GACRVHSNTELG 662
Query: 394 ALALMSKMEDNGCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGLL 442
LA +E + P A IYA G +++ ++ R+M R L+
Sbjct: 663 KLAARKILELDPNEPAAYIQLSNIYAC--AGKWEESTEMRRKMKERNLV 709
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 148/326 (45%), Gaps = 23/326 (7%)
Query: 85 KIQGKLAQPDVVMYSTIIDSLCKD-KLVNDAYNLYSEMLAK-RISPDVVTYTTLISGFCI 142
K+ ++ V+ ++ +I K+ L +A NL+SEM+ + + P+ T++ S F
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS---SAFKA 382
Query: 143 VGQLKE-AVG--LLNQMVLKSINPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPD 199
G L + VG +L Q + + + + ++ K ++++A+ + + +
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL----SEKN 438
Query: 200 VVTYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFK 259
+V+Y++ +DG C +A + + +T EL +++ +++G+ + + +
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 260 QMHTENITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNH 319
Q+ ++ N ++LI K G I A + N M +R NVI+++S++ K+
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKHG 554
Query: 320 HVDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVF----QDLLIKGYNLDV 375
+ +M +G+ PN TY +L G + + F +D IK +
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP---KM 611
Query: 376 RTYTIMINGLCKDGLFDEALALMSKM 401
Y M++ LC+ GL +A ++ M
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTM 637
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 169/401 (42%), Gaps = 25/401 (6%)
Query: 41 DLFTFNILINCYCHLGQITSAFSVLCNIFKRGYQPDTITFNTIIKIQGKLAQPDV--VMY 98
++ T+ ++I +G A ++ G++ D T +++ +L + ++
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 99 STIIDSLCKDKLVNDAYNLYSEMLAKRISPD------------VVTYTTLISGFCIVGQL 146
S I S D + ++Y++ A D V+++T LI+G+ L
Sbjct: 293 SWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNL 352
Query: 147 K-EAVGLLNQMVLKS-INPDVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVVTYS 204
EA+ L ++M+ + + P+ +TFS A + K VL K G + +
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVAN 412
Query: 205 SLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQMHTE 264
S++ + + + A+ F +++ L SY+ ++G C+ + A L ++
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLV----SYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 265 NITPNVVTYSSLIDGLCKSGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHVDNA 324
+ + T++SL+ G+ G I ++ +++ GL N ++L+ K +D A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 325 ISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMING 384
+ M+++ NV ++T ++ G K G E F ++ +G + TY +++
Sbjct: 529 SRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 385 LCKDGLFDEALALMSKM-EDNGCTPNAVTYEIIIYALFQKG 424
GL E + M ED+ P Y ++ L + G
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 16/239 (6%)
Query: 143 VGQLKEAVGLLNQMVLKSINP-DVYTFSILVDALCKEGKVKEAKNVLAVMIKGGEKPDVV 201
G L+ AV L+ M I P D TFS L+ + + + K V A +I+ +PD V
Sbjct: 39 AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98
Query: 202 TYSSLMDGYCLVNEVNKAEDIFNTMTRMELAPDVQSYSIMINGLCKIKMVDDALNLFKQM 261
Y+SL+ Y + KAED+F TM R DV S+S M+ DA+ +F +
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 262 HTENITPNVVTYSSLIDGLCKS-----GRISDAWELVNEMHSRGLPPNVITYSSLLDALC 316
+ PN Y+++I S GR++ L M + +V SL+D
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVT----LGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 317 KNHH-VDNAISLIKKMKHQGILPNVYTYTILLDGLCKGGRLKDAQEVFQDLLIKGYNLD 374
K + +NA + KM NV T+T+++ + G ++A F D+++ G+ D
Sbjct: 214 KGENSFENAYKVFDKMSEL----NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/457 (18%), Positives = 174/457 (38%), Gaps = 121/457 (26%)
Query: 94 DVVMYSTIIDSLCKDKLVNDAYNLYSEMLAKRISPDVVTYTTLISGFCIVGQLKEAVGLL 153
D V +S+++ S + + +++ ++ I PD V Y +LIS + G +A +
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 154 NQMV-----------------------LKSIN-----------PDVYTFSILVDALCKEG 179
M L +I P+ Y ++ ++ A
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 180 KVKEAKNVLAVMIKGGE-KPDVVTYSSLMDGYCL-VNEVNKAEDIFNTMTRMELAPDVQS 237
V + L ++K G + DV SL+D + N A +F+ M+ + +V +
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL----NVVT 236
Query: 238 YSIMINGLCKIKMVDDALNLF-------------------------------KQMHTENI 266
+++MI ++ +A+ F KQ+H+ I
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 267 TPNVV--TYSSLIDGLCK---SGRISDAWELVNEMHSRGLPPNVITYSSLLDALCKNHHV 321
+V SL+D K G + D ++ + M +V+++++L+ KN ++
Sbjct: 297 RSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDH----SVMSWTALITGYMKNCNL 352
Query: 322 -DNAISLIKKMKHQG-ILPNVYTYTILLDG------------------------------ 349
AI+L +M QG + PN +T++
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVAN 412
Query: 350 -----LCKGGRLKDAQEVFQDLLIKGYNLDVRTYTIMINGLCKDGLFDEALALMSKMEDN 404
K R++DAQ F+ L K ++ +Y ++G C++ F++A L+S++ +
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEK----NLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 405 GCTPNAVTYEIIIYALFQKGDNDKAEKLLRQMIARGL 441
+A T+ ++ + G K E++ Q++ GL
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505