Miyakogusa Predicted Gene

Lj2g3v2088270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2088270.1 tr|Q1ECR6|Q1ECR6_ARATH At4g23900 OS=Arabidopsis
thaliana PE=2 SV=1,71.77,0,NUCLEOSIDE DIPHOSPHATE KINASE,Nucleoside
diphosphate kinase; NUCDPKINASE,Nucleoside diphosphate
kina,gene.g42927.t1.1
         (206 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23900.1 | Symbols:  | Nucleoside diphosphate kinase family p...   290   4e-79
AT4G23895.3 | Symbols:  | Pleckstrin homology (PH) domain-contai...   290   4e-79
AT4G11010.1 | Symbols: NDPK3 | nucleoside diphosphate kinase 3 |...   275   1e-74
AT5G63310.1 | Symbols: NDPK2, NDPK1A, NDPK IA IA, NDPK IA, ATNDP...   160   5e-40
AT4G09320.1 | Symbols: NDPK1 | Nucleoside diphosphate kinase fam...   155   2e-38
AT1G17410.1 | Symbols:  | Nucleoside diphosphate kinase family p...    71   4e-13
AT1G17410.2 | Symbols:  | Nucleoside diphosphate kinase family p...    71   4e-13

>AT4G23900.1 | Symbols:  | Nucleoside diphosphate kinase family
           protein | chr4:12424505-12426318 FORWARD LENGTH=237
          Length = 237

 Score =  290 bits (743), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 144/211 (68%), Positives = 162/211 (76%), Gaps = 17/211 (8%)

Query: 13  AEGRAVGAASAVLFTNKAPLLASSYRRAGSQSGPGAWISGXXXXXXXXXXXQDQEVHAAE 72
           +EGRA+GAAS V  T K P  AS++ ++GS     +WI+G           QDQE  AAE
Sbjct: 27  SEGRAIGAASVVHATGKVPQYASNFGKSGSGFVSNSWITGLLALPAAAFMLQDQEALAAE 86

Query: 73  -----------------ISEIISRFERKGYKLVGIKVLVPSKEFAQRHYHDLKERPFFNE 115
                            ISEII+RFERKGYKLVGIKV+VPSK FAQ+HYHDLKERPFFN 
Sbjct: 87  MERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNG 146

Query: 116 LCEFLSSGPVVAMVWEGQGAISYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGP 175
           LC FLSSGPVVAMVWEG+G I YGRKLIGATDPQKSEPGTIRGDLAV+VGRNIIHGSDGP
Sbjct: 147 LCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 206

Query: 176 ETAKDEVNLWFKPEELVNFTSNAEKWVYGSN 206
           ETAKDE++LWFKPEELV++TSNAEKW+YG N
Sbjct: 207 ETAKDEISLWFKPEELVSYTSNAEKWIYGQN 237


>AT4G23895.3 | Symbols:  | Pleckstrin homology (PH)
           domain-containing protein | chr4:12422883-12426318
           FORWARD LENGTH=467
          Length = 467

 Score =  290 bits (742), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 144/211 (68%), Positives = 162/211 (76%), Gaps = 17/211 (8%)

Query: 13  AEGRAVGAASAVLFTNKAPLLASSYRRAGSQSGPGAWISGXXXXXXXXXXXQDQEVHAAE 72
           +EGRA+GAAS V  T K P  AS++ ++GS     +WI+G           QDQE  AAE
Sbjct: 257 SEGRAIGAASVVHATGKVPQYASNFGKSGSGFVSNSWITGLLALPAAAFMLQDQEALAAE 316

Query: 73  -----------------ISEIISRFERKGYKLVGIKVLVPSKEFAQRHYHDLKERPFFNE 115
                            ISEII+RFERKGYKLVGIKV+VPSK FAQ+HYHDLKERPFFN 
Sbjct: 317 MERTFIAIKPDGVQRGLISEIITRFERKGYKLVGIKVMVPSKGFAQKHYHDLKERPFFNG 376

Query: 116 LCEFLSSGPVVAMVWEGQGAISYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGP 175
           LC FLSSGPVVAMVWEG+G I YGRKLIGATDPQKSEPGTIRGDLAV+VGRNIIHGSDGP
Sbjct: 377 LCNFLSSGPVVAMVWEGEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGP 436

Query: 176 ETAKDEVNLWFKPEELVNFTSNAEKWVYGSN 206
           ETAKDE++LWFKPEELV++TSNAEKW+YG N
Sbjct: 437 ETAKDEISLWFKPEELVSYTSNAEKWIYGQN 467


>AT4G11010.1 | Symbols: NDPK3 | nucleoside diphosphate kinase 3 |
           chr4:6732780-6734298 REVERSE LENGTH=238
          Length = 238

 Score =  275 bits (703), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 143/212 (67%), Positives = 165/212 (77%), Gaps = 18/212 (8%)

Query: 13  AEGRAVGAASAVLFTNKAPLLASSY-RRAGSQSGPGAWISGXXXXXXXXXXXQDQEVHAA 71
           +EGRA+GAA+AV  + K PL AS++ R +GS     +WI+G           QDQEV AA
Sbjct: 27  SEGRAIGAAAAVSASGKIPLYASNFARSSGSGVASKSWITGLLALPAAAYMIQDQEVLAA 86

Query: 72  E-----------------ISEIISRFERKGYKLVGIKVLVPSKEFAQRHYHDLKERPFFN 114
           E                 ISEIISRFERKG+KLVGIKV+VPSK+FAQ+HYHDLKERPFFN
Sbjct: 87  EMERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAQKHYHDLKERPFFN 146

Query: 115 ELCEFLSSGPVVAMVWEGQGAISYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDG 174
            LC+FLSSGPV+AMVWEG G I YGRKLIGATDPQKSEPGTIRGDLAV VGRNIIHGSDG
Sbjct: 147 GLCDFLSSGPVIAMVWEGDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDG 206

Query: 175 PETAKDEVNLWFKPEELVNFTSNAEKWVYGSN 206
           PETAKDE++LWFKP+ELV++TSN+EKW+YG N
Sbjct: 207 PETAKDEISLWFKPQELVSYTSNSEKWLYGDN 238


>AT5G63310.1 | Symbols: NDPK2, NDPK1A, NDPK IA IA, NDPK IA, ATNDPK2
           | nucleoside diphosphate kinase 2 |
           chr5:25372122-25373838 REVERSE LENGTH=231
          Length = 231

 Score =  160 bits (405), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 92/130 (70%)

Query: 73  ISEIISRFERKGYKLVGIKVLVPSKEFAQRHYHDLKERPFFNELCEFLSSGPVVAMVWEG 132
           + EIISRFE+KG+KL+G+K+    KE A+ HY DL  + FF  L E+++SGPVV M WEG
Sbjct: 100 VGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEG 159

Query: 133 QGAISYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGPETAKDEVNLWFKPEELV 192
            G ++  RKLIG TDP ++EPGTIRGDLAV  GRNI+HGSD PE  K E+ LWFK  EL 
Sbjct: 160 VGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELC 219

Query: 193 NFTSNAEKWV 202
            + S    W+
Sbjct: 220 KWDSALATWL 229


>AT4G09320.1 | Symbols: NDPK1 | Nucleoside diphosphate kinase family
           protein | chr4:5923424-5924366 FORWARD LENGTH=169
          Length = 169

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 70/136 (51%), Positives = 98/136 (72%), Gaps = 1/136 (0%)

Query: 68  VHAAEISEIISRFERKGYKLVGIKVLVPSKEFAQRHYHDLKERPFFNELCEFLSSGPVVA 127
           V    I E+I RFE+KG+ L G+K++   + FA++HY DL  + FF+ L +++ SGPVVA
Sbjct: 33  VQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVA 92

Query: 128 MVWEGQGAISYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGPETAKDEVNLWFK 187
           M+WEG+  +  GRK+IGAT+P  SEPGTIRGD A+ +GRN+IHGSD  E+A+ E+ LWF 
Sbjct: 93  MIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWF- 151

Query: 188 PEELVNFTSNAEKWVY 203
           P+  VN+ S+   WVY
Sbjct: 152 PDGPVNWQSSVHPWVY 167


>AT1G17410.1 | Symbols:  | Nucleoside diphosphate kinase family
           protein | chr1:5968627-5969780 REVERSE LENGTH=181
          Length = 181

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 84  GYKLVGIKVLVPSKEFAQRHYHDLKERPFFNELCEFLSSGPVVAMVWEGQGAISYGRKLI 143
           G+ +V   +    KE A   Y +   R FF  L  +++SGPV+ MV E + A+S  R LI
Sbjct: 60  GFNIVKEMLTQLDKETASAFYEEHSSRSFFPHLVTYMTSGPVLVMVLEKRNAVSDWRDLI 119

Query: 144 GATDPQK---SEPGTIRGDLAVIVGRNIIHGSDGPETAKDEVNLWFK 187
           G TD +K   S P +IR        +N +HGSD   +A+ E+  +FK
Sbjct: 120 GPTDAEKAKISHPHSIRALCGKNSQKNCVHGSDSTSSAEREIKFFFK 166


>AT1G17410.2 | Symbols:  | Nucleoside diphosphate kinase family
           protein | chr1:5968627-5969444 REVERSE LENGTH=144
          Length = 144

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 84  GYKLVGIKVLVPSKEFAQRHYHDLKERPFFNELCEFLSSGPVVAMVWEGQGAISYGRKLI 143
           G+ +V   +    KE A   Y +   R FF  L  +++SGPV+ MV E + A+S  R LI
Sbjct: 23  GFNIVKEMLTQLDKETASAFYEEHSSRSFFPHLVTYMTSGPVLVMVLEKRNAVSDWRDLI 82

Query: 144 GATDPQK---SEPGTIRGDLAVIVGRNIIHGSDGPETAKDEVNLWFK 187
           G TD +K   S P +IR        +N +HGSD   +A+ E+  +FK
Sbjct: 83  GPTDAEKAKISHPHSIRALCGKNSQKNCVHGSDSTSSAEREIKFFFK 129