Miyakogusa Predicted Gene

Lj2g3v2087760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2087760.1 tr|G7J2L9|G7J2L9_MEDTR SDA1-like protein
OS=Medicago truncatula GN=MTR_3g086350 PE=4 SV=1,70.63,0,ARM
repeat,Armadillo-type fold; SDA1,SDA1; NUC130_3NT,Uncharacterised
domain NUC130/133, N-terminal;,CUFF.38549.1
         (775 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13160.1 | Symbols:  | ARM repeat superfamily protein | chr1:...   546   e-155
AT4G31520.1 | Symbols:  | SDA1 family protein | chr4:15278281-15...   425   e-119

>AT1G13160.1 | Symbols:  | ARM repeat superfamily protein |
           chr1:4484634-4488388 FORWARD LENGTH=804
          Length = 804

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/509 (54%), Positives = 357/509 (70%), Gaps = 21/509 (4%)

Query: 14  LQSKMKCDPQGNESELLLLRNQFDSSLYLFLEQATQSFTSISGIGTDPTVAKDLADRALF 73
           LQ K+K DP+G E+EL L+  QF +S+ LF E A  SF+S  GIG+DP+V+KDL DRA+F
Sbjct: 27  LQGKIKRDPEGYETELQLIYKQFKTSVDLFHELAALSFSSTGGIGSDPSVSKDLGDRAMF 86

Query: 74  LSHVTPFYPNHLADFPSKLIQLLHEAHRTLPSGLRCHLAQALILLVNRSIVDIGETLSLF 133
           L+HVTPFYP  LA FP++L  LL  +   +PSGLR H+AQALILL+NR  + I + L+LF
Sbjct: 87  LAHVTPFYPKQLAAFPAQLTGLLRTSCLAMPSGLRNHIAQALILLMNRKSLVIEDLLALF 146

Query: 134 MELQTLGDKTLKKLAFDHVIHNIKRMNLKHKNDAKNRSLQNILFVMLQGHNCSEKITNRE 193
           +++QTLGDK L+ LAF H++  I++M++    D K++SLQ I+  ML+          +E
Sbjct: 147 LDIQTLGDKNLRNLAFGHIVQTIRKMSI---TDPKHKSLQKIVISMLE----------QE 193

Query: 194 KEQHAMRALVTLCELHRRKVWF---DERTANAICNAALHPQSRIMITALQFLLDYEKITX 250
            E  A RAL TLC LH++K+W    +ER A AIC A  H   RIMI+AL+FLLDYE I  
Sbjct: 194 DEAKAKRALATLCALHKKKIWLGDKNERVAIAICEACFHSSPRIMISALRFLLDYENIDD 253

Query: 251 XXXXXXXXXXXXLTES-PQVILSREKVYKASHQGTXXXXXXXXXXLERVIRSMKKQQRMS 309
                        ++   QV+++R+ VYKA+++GT          L+R ++S+K++QR S
Sbjct: 254 DDDSDAESDDDEESKKIDQVVINRQAVYKANNKGTSSSKKKKQAKLQRAVKSIKRKQRSS 313

Query: 310 SEKRNNSYYSPLNHLLDAQGFAEKLFSYLQ---NCNERFEIKVMIMKLIARTIGLHQLIL 366
           SE    S +SPLNHL DAQ FAEKLFS LQ      ER E ++M++K+IARTIGLH+L L
Sbjct: 314 SEN-TTSTFSPLNHLNDAQKFAEKLFSRLQTIKGSGERVETRLMMIKVIARTIGLHKLHL 372

Query: 367 LNFYPFVQKYIQPHQRDVTSLLAAVVQACHDMVPPDAIEPLFKQIVNQFVHDRSPPEAIT 426
           L+FYPF+Q Y  PH +D+T +LAA VQ+CHD VP D +EPLFKQIVNQFVHD+S PEAI 
Sbjct: 373 LSFYPFLQNYALPHVKDITQILAAAVQSCHDGVPSDVVEPLFKQIVNQFVHDKSRPEAIA 432

Query: 427 VGLNAVREICMRMPLLMNEDLLQDLALYKKSHEKAVSVAARSLIGVFREICPSLLVKKDR 486
           VGLN VRE+C+R+  LM E+LLQDLALYKKSHEKA+S AARSLI +FREI PSLLVKKDR
Sbjct: 433 VGLNVVREMCLRVHDLMTEELLQDLALYKKSHEKAISAAARSLIALFREINPSLLVKKDR 492

Query: 487 GRPTNPTARPKAYGEVNIATEVPGAELLH 515
           GRP      PK YGE N+ + VP  ELL 
Sbjct: 493 GRPGATVFIPKHYGESNVFSNVPNVELLQ 521



 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/149 (59%), Positives = 109/149 (73%), Gaps = 2/149 (1%)

Query: 626 FADFNGTLTAADTSLQALKKLTGTTTGQALPESEDGFLSNEDFQRIKKLKAKNEARNALA 685
             DF+  L +ADTSL+ALK+       +   +  DG LSNEDF++IK L+AK EA+ ALA
Sbjct: 637 IVDFDANLLSADTSLRALKRFAEAKNEKPSFDEGDGILSNEDFRKIKTLQAKKEAKIALA 696

Query: 686 QHGLAIKVPSSDQLSLKRVDGAALEVHVKKKMNKEERLALVRAGREDRGKYCARTAVKQK 745
           + G   KVP+SDQLS KRVD A LE H++ K+ KE+RL LV+AGREDRGKY ++ AVKQK
Sbjct: 697 RKGF--KVPNSDQLSKKRVDPAKLEAHIRHKLTKEQRLELVKAGREDRGKYKSKAAVKQK 754

Query: 746 KTGGLSNRQKEHKKKMPLAAKRYKVAKSK 774
           KTGG SN+QKEH+K MPLAA R K  KSK
Sbjct: 755 KTGGSSNKQKEHRKNMPLAAIRSKAGKSK 783


>AT4G31520.1 | Symbols:  | SDA1 family protein |
           chr4:15278281-15281739 REVERSE LENGTH=698
          Length = 698

 Score =  425 bits (1092), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/476 (47%), Positives = 301/476 (63%), Gaps = 66/476 (13%)

Query: 72  LFLSHVTPFYPNHLADFPSKLIQLLHEAHRTLPSGLRCHLAQALILLVNRSIVDIGETLS 131
           +FL+HVTPFYPN LA FP++L  LL  +   +PSGLR  +AQ+LILL+NR  + I + L+
Sbjct: 1   MFLAHVTPFYPNQLAAFPAQLTDLLRTSCLAMPSGLRYQVAQSLILLMNRKSLVIEDLLA 60

Query: 132 LFMELQTLGDKTLKKLAFDHVIHNIKRMNLKHKNDAKNRSLQNILFVMLQGHNCSEKITN 191
           LF+++QTLGDK L+KLAF H++  I++M++    D +++SL  I+F ML+          
Sbjct: 61  LFLDIQTLGDKNLRKLAFSHIVQTIRKMSI---TDPRHKSLHKIVFSMLE---------- 107

Query: 192 REKEQHAMRALVTLCELHRRKVWFDE---RTANAICNAALHPQSRIMITALQFLLDYEKI 248
           +E E  A RALVTLCELH++KVWF +   R A AIC A  H   RI I++L+FLLDY+ I
Sbjct: 108 QEDETKAKRALVTLCELHKKKVWFGDKHDRVAIAICEACFHTSPRIRISSLRFLLDYDNI 167

Query: 249 TXXXXXXXXXXXXXLTESPQVILSREKVYKASHQGTXXXXXXXXXXLERVIRSMKKQQRM 308
                           +S   +   E+++ +  +            L+R +RS+K++QR 
Sbjct: 168 NDE------------DDSDLRLCLTERLFTSKKK--------KQAKLQRAMRSIKRKQRA 207

Query: 309 SSEKRNNSYYSPLNHLLDAQGFAEKLFSYLQ------------------------NCNER 344
           SSE    S YSPLNHL DAQ FAE+L   ++                           ER
Sbjct: 208 SSEN-TTSTYSPLNHLNDAQNFAERLLPLIRPKPDESTVETNDKSSGETDDKSTGETYER 266

Query: 345 FEIKVMIMKLIARTIGLHQLILLNFYPFVQKYIQPHQRDVTSLLAAVVQACHDMVPPDAI 404
            E ++MI+K+IARTIGLH+L+L  FY ++Q Y +   +D+T +LAA VQACHD VP DA+
Sbjct: 267 RETRLMIIKVIARTIGLHKLLLFKFYTYLQAYAKDGVKDITQILAAAVQACHDGVPSDAV 326

Query: 405 EPLFKQIVNQFVHDRSPPEAITVGLNAVREICMRMPLLMNEDLLQDLALYK-----KSHE 459
           EPLFKQIVN+F+HDRS PEAI V LN VRE+ +R+P LM EDLL DLA YK     ++H 
Sbjct: 327 EPLFKQIVNKFLHDRSSPEAIPVALNVVREMFLRIPELMTEDLLHDLAQYKTDKKYRTHR 386

Query: 460 KAVSVAARSLIGVFREICPSLLVKKDRGRPTNPTARPKAYGEVNIATEVPGAELLH 515
           KA+S A+ SLI +FREI P LLVKKDRGRP  P ARPK YGEVN+ + VP  +LL 
Sbjct: 387 KAISAASASLIALFREINPLLLVKKDRGRPGGPIARPKKYGEVNVFSNVPNVDLLQ 442



 Score =  174 bits (441), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/174 (55%), Positives = 123/174 (70%), Gaps = 3/174 (1%)

Query: 602 SEYEDNDGSVEAKSTL-KETSKKRKFADFNGTLTAADTSLQALKKLTGTTTGQALPESED 660
           +E ++ + SVE      K   KKRK  DF+ +L AADTSL+ALK+       Q      D
Sbjct: 506 NEEDEGEASVEGSGNREKAKGKKRKLVDFDASLLAADTSLRALKRCAEAEREQTSFAERD 565

Query: 661 GFLSNEDFQRIKKLKAKNEARNALAQHGLAIKVPSSDQLSLKRVDGAALEVHVKKKMNKE 720
           G LSNEDF++IK++K K +A+ ALA+ GL  KVP SD+LS K V+ A LE H+++K+ KE
Sbjct: 566 GILSNEDFRKIKEVKGKKDAKLALARKGL--KVPDSDKLSKKLVNPAKLEAHIRQKLIKE 623

Query: 721 ERLALVRAGREDRGKYCARTAVKQKKTGGLSNRQKEHKKKMPLAAKRYKVAKSK 774
           ERL LV+AGREDRGKY ++TA+KQKKTGG SNRQKEHKK MPLAA R K  K+K
Sbjct: 624 ERLELVKAGREDRGKYKSKTAIKQKKTGGSSNRQKEHKKNMPLAAVRSKAGKAK 677