Miyakogusa Predicted Gene
- Lj2g3v2084390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2084390.1 tr|C1E4J1|C1E4J1_MICSR Predicted protein
(Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,32.37,3e-16,coiled-coil,NULL; seg,NULL; MYOSIN VIII,NULL;
MYOSIN,NULL,gene.g42875.t1.1
(221 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19960.1 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FO... 305 2e-83
AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FO... 305 2e-83
AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucleo... 290 4e-79
AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:220... 130 1e-30
AT5G54280.1 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:220... 129 1e-30
AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucleo... 115 3e-26
>AT3G19960.1 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FORWARD
LENGTH=1166
Length = 1166
Score = 305 bits (781), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/225 (71%), Positives = 181/225 (80%), Gaps = 9/225 (4%)
Query: 2 KIKDSDEVLVKASFLAELQRRVXXXXXXXXXXXXXNDILHQRLQQYDSRWSEYELKMKSM 61
K + EVLVKAS L+ELQRRV NDIL QRLQQY++RWSEYE KMKSM
Sbjct: 943 KTNELGEVLVKASVLSELQRRVLKAEAALREKEEENDILQQRLQQYENRWSEYETKMKSM 1002
Query: 62 EEVWQKQMRSLQSSLSIAKKSLAIDDSERSSDASVNASDERDHSWDVGSNH-RRQESNGT 120
EE+WQKQMRSLQSSLSIAKKSLA++DS R+SDASVNASD D WD SN R Q SNG
Sbjct: 1003 EEIWQKQMRSLQSSLSIAKKSLAVEDSARNSDASVNASDATD--WDSSSNQFRSQTSNGV 1060
Query: 121 RS----TSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMF 176
S SAGLSVI R+AEEFEQR+QVFGDDAKFLVEVKSGQVEA+L+PD+ELRRLKQMF
Sbjct: 1061 GSRLQPMSAGLSVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLDPDRELRRLKQMF 1120
Query: 177 EAWKKDYGARLRETKVILNKLGSEDS--ALDKVKKSWWGRRNSTR 219
E WKKDYG RLRETK+IL+KLGSE+S +++KVK+ WWGRRNSTR
Sbjct: 1121 ETWKKDYGGRLRETKLILSKLGSEESSGSMEKVKRKWWGRRNSTR 1165
>AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FORWARD
LENGTH=1176
Length = 1176
Score = 305 bits (780), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/225 (71%), Positives = 181/225 (80%), Gaps = 9/225 (4%)
Query: 2 KIKDSDEVLVKASFLAELQRRVXXXXXXXXXXXXXNDILHQRLQQYDSRWSEYELKMKSM 61
K + EVLVKAS L+ELQRRV NDIL QRLQQY++RWSEYE KMKSM
Sbjct: 953 KTNELGEVLVKASVLSELQRRVLKAEAALREKEEENDILQQRLQQYENRWSEYETKMKSM 1012
Query: 62 EEVWQKQMRSLQSSLSIAKKSLAIDDSERSSDASVNASDERDHSWDVGSNH-RRQESNGT 120
EE+WQKQMRSLQSSLSIAKKSLA++DS R+SDASVNASD D WD SN R Q SNG
Sbjct: 1013 EEIWQKQMRSLQSSLSIAKKSLAVEDSARNSDASVNASDATD--WDSSSNQFRSQTSNGV 1070
Query: 121 RS----TSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMF 176
S SAGLSVI R+AEEFEQR+QVFGDDAKFLVEVKSGQVEA+L+PD+ELRRLKQMF
Sbjct: 1071 GSRLQPMSAGLSVIGRLAEEFEQRAQVFGDDAKFLVEVKSGQVEANLDPDRELRRLKQMF 1130
Query: 177 EAWKKDYGARLRETKVILNKLGSEDS--ALDKVKKSWWGRRNSTR 219
E WKKDYG RLRETK+IL+KLGSE+S +++KVK+ WWGRRNSTR
Sbjct: 1131 ETWKKDYGGRLRETKLILSKLGSEESSGSMEKVKRKWWGRRNSTR 1175
>AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:18650688-18657106 FORWARD LENGTH=1153
Length = 1153
Score = 290 bits (743), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 173/217 (79%), Gaps = 4/217 (1%)
Query: 5 DSDEVLVKASFLAELQRRVXXXXXXXXXXXXXNDILHQRLQQYDSRWSEYELKMKSMEEV 64
+SDEVLVKAS+L++LQRRV NDIL QR+QQYD+RWSEYE KMKSMEE+
Sbjct: 938 ESDEVLVKASYLSDLQRRVLRTEAALREKEEENDILRQRVQQYDNRWSEYETKMKSMEEI 997
Query: 65 WQKQMRSLQSSLSIAKKSLAIDDSERSSDASVNASDERDHSWDVGSNHRRQESNGTRSTS 124
WQKQM+SLQSSLSIAKKSL ++DS R+SDASVNASD D D G +H + +RS
Sbjct: 998 WQKQMKSLQSSLSIAKKSLEVEDSARNSDASVNASDATD--LDSGGSHYQMGHGRSRSVG 1055
Query: 125 AGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYG 184
GLSVISR+AEEF QR+QVFGDD KFL+EVKSGQVEA+LNPD+ELRRLKQMFE WKKDYG
Sbjct: 1056 VGLSVISRLAEEFGQRAQVFGDDRKFLMEVKSGQVEANLNPDRELRRLKQMFETWKKDYG 1115
Query: 185 ARLRETKVILNKLGSEDSA--LDKVKKSWWGRRNSTR 219
RLRETK+IL+KLGSE++ +KVK +WWGR STR
Sbjct: 1116 GRLRETKLILSKLGSEETGGSAEKVKMNWWGRLRSTR 1152
>AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 |
chr5:22039606-22045592 REVERSE LENGTH=1220
Length = 1220
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 28/227 (12%)
Query: 11 VKASFLAELQRRVXXXXXXXXXXXXXNDILHQRLQQYDSRWSEYELKMKSMEEVWQKQMR 70
V+ + +++LQ+R+ N L ++L+Q++ RWSEY++KMKSMEE WQKQM
Sbjct: 999 VQPTSMSDLQKRILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMS 1058
Query: 71 SLQSSLSIAKKSLAID------DSERSSDASVNASDERDHSWDVGSNHRRQESNG----- 119
SLQ SL+ A+KSLA + + + S D D + G+ R +N
Sbjct: 1059 SLQMSLAAARKSLAAESITGQAGGRQDTSISPFGYDSED-TMSTGTPGVRTPTNKFTNGN 1117
Query: 120 -----TRSTSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLN------PDQE 168
R + L+ ++ +A EF+QR F +DA+ +VEVK G +A+ N P+ E
Sbjct: 1118 TPELRIRELNGSLNAVNHLAREFDQRRLNFDEDARAIVEVKLGP-QATPNGQQQQHPEDE 1176
Query: 169 LRRLKQMFEAWKKDYGARLRETKVILNKLGSEDSALDKVKKSWWGRR 215
RRLK FE WKKDY ARLR+TK L+++ + + WWG+R
Sbjct: 1177 FRRLKLRFETWKKDYKARLRDTKARLHRVDGDKGR----HRKWWGKR 1219
>AT5G54280.1 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 |
chr5:22039606-22044715 REVERSE LENGTH=1030
Length = 1030
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 28/228 (12%)
Query: 11 VKASFLAELQRRVXXXXXXXXXXXXXNDILHQRLQQYDSRWSEYELKMKSMEEVWQKQMR 70
V+ + +++LQ+R+ N L ++L+Q++ RWSEY++KMKSMEE WQKQM
Sbjct: 809 VQPTSMSDLQKRILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMS 868
Query: 71 SLQSSLSIAKKSLAID------DSERSSDASVNASDERDHSWDVGSNHRRQESNG----- 119
SLQ SL+ A+KSLA + + + S D D + G+ R +N
Sbjct: 869 SLQMSLAAARKSLAAESITGQAGGRQDTSISPFGYDSED-TMSTGTPGVRTPTNKFTNGN 927
Query: 120 -----TRSTSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLN------PDQE 168
R + L+ ++ +A EF+QR F +DA+ +VEVK G +A+ N P+ E
Sbjct: 928 TPELRIRELNGSLNAVNHLAREFDQRRLNFDEDARAIVEVKLGP-QATPNGQQQQHPEDE 986
Query: 169 LRRLKQMFEAWKKDYGARLRETKVILNKLGSEDSALDKVKKSWWGRRN 216
RRLK FE WKKDY ARLR+TK L+++ + + WWG+R
Sbjct: 987 FRRLKLRFETWKKDYKARLRDTKARLHRVDGDKGR----HRKWWGKRG 1030
>AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr4:13694881-13700780 REVERSE LENGTH=1134
Length = 1134
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 109/210 (51%), Gaps = 20/210 (9%)
Query: 6 SDEVLVKASFLAELQRRVXXXXXXXXXXXXXNDILHQRLQQYDSRWSEYELKMKSMEEVW 65
S++ V+ LA+LQ RV N L + LQ+++ RW E E +MKSME+ W
Sbjct: 943 SEQFEVQPCVLADLQSRVLKVEAAIMQKEDENTALQEELQRFEERWLENETRMKSMEDTW 1002
Query: 66 QKQMRSLQSSLSIAKKSLAIDDSERSSDASVNASDERDHSWDVGSNHRRQESNGTRSTSA 125
QK M S+Q SL+ A K LA D + + + +D D + G+ T+
Sbjct: 1003 QKHMSSMQMSLAAACKVLAPDKT------ASHGTDSED-TMSFGT--------PTKELKG 1047
Query: 126 GLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGA 185
LS ++ ++ EF+QRS + +D K LVEVKS + +ELRRLK FE WKKDY
Sbjct: 1048 SLSDVNNLSTEFDQRSVIIHEDPKSLVEVKSDSISNRKQHAEELRRLKSRFEKWKKDYKT 1107
Query: 186 RLRETKVILNKLGSEDSALDKVKKSWWGRR 215
RLRETK + G E ++WW ++
Sbjct: 1108 RLRETKARVRLNGDEGR-----HRNWWCKK 1132