Miyakogusa Predicted Gene
- Lj2g3v2061270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2061270.1 tr|J9EAI0|J9EAI0_WUCBA MIZ zinc finger family
protein (Fragment) OS=Wuchereria bancrofti PE=4
SV=1,33.97,5e-16,SUBFAMILY NOT NAMED,NULL; ZINC FINGER MIZ
DOMAIN-CONTAINING PROTEIN,NULL; ZF_SP_RING,Zinc finger,
MI,CUFF.38490.1
(666 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41580.1 | Symbols: | RING/U-box superfamily protein | chr5:... 428 e-120
AT1G08910.1 | Symbols: EMB3001 | zinc ion binding;zinc ion bindi... 303 3e-82
AT5G60410.3 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M... 71 2e-12
AT5G60410.5 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M... 71 3e-12
AT5G60410.2 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M... 71 3e-12
AT5G60410.1 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M... 71 3e-12
AT5G60410.4 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with M... 71 3e-12
>AT5G41580.1 | Symbols: | RING/U-box superfamily protein |
chr5:16626563-16630659 REVERSE LENGTH=760
Length = 760
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/469 (46%), Positives = 299/469 (63%), Gaps = 30/469 (6%)
Query: 10 AFKGTGQPLSPSDINSYRINAVVGRLNQHVQPSSTKPTRTDPYEFYNLCLSLSRGIDYAL 69
A G + + S +NS+R+ +V RL H+Q + + DP EF C+S ++GID+A+
Sbjct: 11 AGTGLREKTAASLVNSFRLASVTQRLRYHIQDGA----KVDPKEFQICCISFAKGIDFAI 66
Query: 70 ANGEIPAKAKDFPKLMKQICQRKNNELGKAAIMVLMISIKNACQYGWFEEKDSEELSTIA 129
AN +IP K ++FP L+KQ+C+ + K A+MVLMIS+K+AC GWF + +S+EL +A
Sbjct: 67 ANNDIPKKVEEFPWLLKQLCRHGTDVYTKTALMVLMISVKHACHLGWFSDSESQELIALA 126
Query: 130 NQIGNIYCSLGNVNAGPSSCNSTISSIIERFYPKMNMGPILVSIEAMPGYGASAVDFHIT 189
++I + S G+ + G S ST S I+ERFYP + +G +LVS E GY A DF+I+
Sbjct: 127 DEIRTCFGSSGSTSPGIKSPGSTFSQIMERFYPFVKLGHVLVSFEVKAGYTMLAHDFYIS 186
Query: 190 KKNVLPDV---KIWLFVAQIDNIETSACLISPQQVNFLLNGKGVDRRTNVQMDTGPQMPT 246
K +P KI LFVAQ DNI+TSAC+ +P +V+FLLNGKGV++R N+ MDTGPQ+PT
Sbjct: 187 KN--MPHSLQEKIRLFVAQTDNIDTSACISNPPEVSFLLNGKGVEKRVNIAMDTGPQLPT 244
Query: 247 HVTGLLKFGTNLLQAVGQFNGHYIILVAYMSFISLPEPPLLQDYVQPPVTSVDSDSDIIE 306
+VT LK+GTNLLQ +G F G+YII++A+ + PE P+L+DY+Q V DSDIIE
Sbjct: 245 NVTAQLKYGTNLLQVMGNFKGNYIIIIAFTGLVVPPEKPVLKDYLQSGVIEASPDSDIIE 304
Query: 307 GPSQISLNCPISFTRIKTPVKGCSCKHFQCFDFDNFININSKKPYWRCPHCNQNVCYADI 366
GPS++SL+CPIS RIK PVKG CKH QCFDF N+++IN + P WRCPHCNQ VCY DI
Sbjct: 305 GPSRVSLSCPISRKRIKLPVKGQLCKHLQCFDFSNYVHINMRNPTWRCPHCNQPVCYPDI 364
Query: 367 RLDRNMVEILKNVGENIVEVMVFADGSWKAVLEVDRGVDKIQVKAPNCEKEQSQQTELKE 426
RLD+NM +ILK+V N +V++ A G+WK V K + P +E E
Sbjct: 365 RLDQNMAKILKDVEHNAADVIIDAGGTWK--------VTKNTGETPEPVREIIHDLE--- 413
Query: 427 FTCSPSPSTVTN----ILDLTNDDDYS-DIMDICATEDRKPSQESLPGQ 470
P ++ N + DLT DDD ++ EDRKP GQ
Sbjct: 414 -----DPMSLLNSGPVVFDLTGDDDAELEVFGDNKVEDRKPCMSDAQGQ 457
>AT1G08910.1 | Symbols: EMB3001 | zinc ion binding;zinc ion binding
| chr1:2856227-2860816 FORWARD LENGTH=829
Length = 829
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 227/357 (63%), Gaps = 20/357 (5%)
Query: 53 EFYNLCLSLSRGIDYALANGEIPAKAKDFPKLMKQICQRKNNEL-GKAAIMVLMISIKNA 111
EF C+SL+ ID A+ E+P ++ ++ +C+RK ++ +A +M LMIS+K+A
Sbjct: 19 EFQASCISLANEIDAAIGRNEVPGNIQELALILNNVCRRKCDDYQTRAVVMALMISVKSA 78
Query: 112 CQYGWFEEKDSEELSTIANQIGNIYCSLGNVNAGPSSCNSTISSIIERFYPKMNMGPILV 171
CQ GWF E++++EL I + + N + NV + +S + IS +IERFYP + +G ILV
Sbjct: 79 CQLGWFPERETQELLAIIDLMWNGFSCPENVTSCVNSPVTLISQVIERFYPCVKLGHILV 138
Query: 172 SIEAMPGYGASAVDFHITKKNVL-PDVKIWLFVAQIDNIETSACLISPQQVNFLLNGKGV 230
S EA P DFHI+KK P K+ LFV + ++I S C++ PQ V+FLLNGKG+
Sbjct: 139 SFEAKPESKMMMKDFHISKKMPHSPKQKVGLFVVRTEDISRSNCIVHPQGVSFLLNGKGI 198
Query: 231 DRRTNVQMDTGPQMPTHVTGLLKFGTNLLQAVGQFNGHYIILVAYMSFISLPEPPLLQDY 290
D+R N+ M++GPQ+PT+VT LL G NLLQA+G F G Y+I +A+M I LP PLL+DY
Sbjct: 199 DKRVNISMESGPQLPTNVTALLNLGANLLQAIGCFGGSYLIAIAFMDVIPLPNKPLLKDY 258
Query: 291 VQPPVTSVDSDSDIIEGPSQISLNCPISFTRIKTPVKGCSCKHFQCFDFDNFININSKKP 350
V P V +SD DIIEGPS+ISL+CPIS TRIK PVKG CKH QCFDF N++N+N+++
Sbjct: 259 VHPEVVGSNSDCDIIEGPSRISLSCPISRTRIKLPVKGHVCKHLQCFDFWNYVNMNTRR- 317
Query: 351 YWRCPHCNQNVCYADIRLDRNMVEILKNVGENIVEVMVFADGSWKAVLEVDRGVDKI 407
+ R+ IL+ VG N +V++ ADG+W E D V+ +
Sbjct: 318 -----------HHGAARI------ILEEVGRNAADVVISADGTWMVETENDEDVELV 357
>AT5G60410.3 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
chr5:24295226-24300300 FORWARD LENGTH=832
Length = 832
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 299 DSDSDIIEGPSQISLNCPISFTRIKTPVKGCSCKHFQCFDFDNFININSKKPYWRCPHCN 358
DSD +++ ++L CP+S +RIK + C H CFD D F+ +N + W+CP C
Sbjct: 347 DSDIEVVADFFGVNLRCPMSGSRIKVAGRFLPCVHMGCFDLDVFVELNQRSRKWQCPICL 406
Query: 359 QNVCYADIRLD---RNMVEILKNVGENIVEVMVFADGSWKAVLEVDRGVDKIQVKAPNCE 415
+N + +D + +K+ E + E+ V DGSW+
Sbjct: 407 KNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKPDGSWRVKF----------------- 449
Query: 416 KEQSQQTELKEFT 428
K +S++ EL E +
Sbjct: 450 KRESERRELGELS 462
>AT5G60410.5 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
chr5:24295226-24300792 FORWARD LENGTH=885
Length = 885
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 20/138 (14%)
Query: 299 DSDSDIIEGPSQISLNCPISFTRIKTPVKGCSCKHFQCFDFDNFININSKKPYWRCPHCN 358
DSD +++ ++L CP+S +RIK + C H CFD D F+ +N + W+CP C
Sbjct: 347 DSDIEVVADFFGVNLRCPMSGSRIKVAGRFLPCVHMGCFDLDVFVELNQRSRKWQCPICL 406
Query: 359 QNVCYADIRLD---RNMVEILKNVGENIVEVMVFADGSWKAVLEVDRGVDKIQVKAPNCE 415
+N + +D + +K+ E + E+ V DGSW+
Sbjct: 407 KNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKPDGSWRVKF----------------- 449
Query: 416 KEQSQQTELKEFTCSPSP 433
K +S++ EL E + +P
Sbjct: 450 KRESERRELGELSQWHAP 467
>AT5G60410.2 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
chr5:24295226-24300792 FORWARD LENGTH=885
Length = 885
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 20/138 (14%)
Query: 299 DSDSDIIEGPSQISLNCPISFTRIKTPVKGCSCKHFQCFDFDNFININSKKPYWRCPHCN 358
DSD +++ ++L CP+S +RIK + C H CFD D F+ +N + W+CP C
Sbjct: 347 DSDIEVVADFFGVNLRCPMSGSRIKVAGRFLPCVHMGCFDLDVFVELNQRSRKWQCPICL 406
Query: 359 QNVCYADIRLD---RNMVEILKNVGENIVEVMVFADGSWKAVLEVDRGVDKIQVKAPNCE 415
+N + +D + +K+ E + E+ V DGSW+
Sbjct: 407 KNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKPDGSWRVKF----------------- 449
Query: 416 KEQSQQTELKEFTCSPSP 433
K +S++ EL E + +P
Sbjct: 450 KRESERRELGELSQWHAP 467
>AT5G60410.1 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
chr5:24295226-24300671 FORWARD LENGTH=873
Length = 873
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 20/138 (14%)
Query: 299 DSDSDIIEGPSQISLNCPISFTRIKTPVKGCSCKHFQCFDFDNFININSKKPYWRCPHCN 358
DSD +++ ++L CP+S +RIK + C H CFD D F+ +N + W+CP C
Sbjct: 347 DSDIEVVADFFGVNLRCPMSGSRIKVAGRFLPCVHMGCFDLDVFVELNQRSRKWQCPICL 406
Query: 359 QNVCYADIRLD---RNMVEILKNVGENIVEVMVFADGSWKAVLEVDRGVDKIQVKAPNCE 415
+N + +D + +K+ E + E+ V DGSW+
Sbjct: 407 KNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKPDGSWRVKF----------------- 449
Query: 416 KEQSQQTELKEFTCSPSP 433
K +S++ EL E + +P
Sbjct: 450 KRESERRELGELSQWHAP 467
>AT5G60410.4 | Symbols: ATSIZ1, SIZ1 | DNA-binding protein with
MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
chr5:24295226-24300830 FORWARD LENGTH=884
Length = 884
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 299 DSDSDIIEGPSQISLNCPISFTRIKTPVKGCSCKHFQCFDFDNFININSKKPYWRCPHCN 358
DSD +++ ++L CP+S +RIK + C H CFD D F+ +N + W+CP C
Sbjct: 347 DSDIEVVADFFGVNLRCPMSGSRIKVAGRFLPCVHMGCFDLDVFVELNQRSRKWQCPICL 406
Query: 359 QNVCYADIRLD---RNMVEILKNVGENIVEVMVFADGSWKAVLEVDRGVDKIQVKAPNCE 415
+N + +D + +K+ E + E+ V DGSW+
Sbjct: 407 KNYSVEHVIVDPYFNRITSKMKHCDEEVTEIEVKPDGSWRVKF----------------- 449
Query: 416 KEQSQQTELKEFT 428
K +S++ EL E +
Sbjct: 450 KRESERRELGELS 462