Miyakogusa Predicted Gene
- Lj2g3v2017750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2017750.1 tr|G7IU95|G7IU95_MEDTR Zinc finger protein
CONSTANS-like protein OS=Medicago truncatula
GN=MTR_2g096,42.57,6e-19,CCT,CCT domain; seg,NULL,CUFF.38451.1
(283 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41380.1 | Symbols: | CCT motif family protein | chr5:165621... 163 1e-40
AT1G63820.1 | Symbols: | CCT motif family protein | chr1:236825... 145 3e-35
AT1G04500.1 | Symbols: | CCT motif family protein | chr1:122175... 94 7e-20
AT3G12890.1 | Symbols: ASML2 | activator of spomin::LUC2 | chr3:... 92 4e-19
AT2G33350.2 | Symbols: | CCT motif family protein | chr2:141341... 90 2e-18
AT2G33350.1 | Symbols: | CCT motif family protein | chr2:141341... 90 2e-18
AT5G59990.1 | Symbols: | CCT motif family protein | chr5:241512... 86 3e-17
AT5G53420.1 | Symbols: | CCT motif family protein | chr5:216736... 79 4e-15
AT4G27900.2 | Symbols: | CCT motif family protein | chr4:138908... 78 7e-15
AT4G27900.1 | Symbols: | CCT motif family protein | chr4:138908... 78 7e-15
AT5G53420.2 | Symbols: | CCT motif family protein | chr5:216747... 78 8e-15
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 58 7e-09
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 57 1e-08
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 56 3e-08
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 55 7e-08
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 54 1e-07
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 53 3e-07
AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5... 50 1e-06
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 1e-06
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 1e-06
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 1e-06
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 1e-06
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 50 2e-06
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif -co... 50 2e-06
AT1G28050.1 | Symbols: | B-box type zinc finger protein with CC... 50 2e-06
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 50 2e-06
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regula... 50 2e-06
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 50 3e-06
AT2G46670.1 | Symbols: | CCT motif family protein | chr2:191645... 48 8e-06
>AT5G41380.1 | Symbols: | CCT motif family protein |
chr5:16562129-16563553 REVERSE LENGTH=307
Length = 307
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 102/143 (71%), Gaps = 6/143 (4%)
Query: 114 ESASKFMQRSYSCNSFDWKLHGDAF----IDSPNFGRHALSSPENSFFTGQIRRACSAGD 169
E++ ++MQRS+S NS + K F +DS N + LSSPEN+FF+ Q+RR S GD
Sbjct: 122 ENSGRYMQRSFSSNSVEGKQTQVPFNIPMMDSSNLSYNNLSSPENAFFSSQMRRVYSTGD 181
Query: 170 LQNVKATHTPQTDS--PLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRK 227
LQN +S P EE NFKVGRYSAEER+EKISKYRAKR+QR F KTIKYACRK
Sbjct: 182 LQNNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRK 241
Query: 228 TLADNRTRIRGRFARNDETSEVP 250
TLAD+R RIRGRFARNDE E+P
Sbjct: 242 TLADSRPRIRGRFARNDEVVEIP 264
>AT1G63820.1 | Symbols: | CCT motif family protein |
chr1:23682529-23684050 REVERSE LENGTH=293
Length = 293
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 97/141 (68%), Gaps = 14/141 (9%)
Query: 140 DSPNF-GRHALSSPENSFFTGQIRRACSAGDLQNVKATHTPQTD--SPLLEESN------ 190
DS NF ++ L+SPE+SFF+ +RR S GDLQN+ T Q SPL ES+
Sbjct: 117 DSSNFQNQNLLNSPEDSFFSDHMRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFS 176
Query: 191 -----FKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDE 245
+VGRYS+EER+EKISKYRAKR+QR F KTIKYACRKTLADNR R+RGRFARNDE
Sbjct: 177 GDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDE 236
Query: 246 TSEVPRATCSTTAEEHEDNFW 266
E P+ S T +E++D+ W
Sbjct: 237 VFENPKIASSFTRQENDDDLW 257
>AT1G04500.1 | Symbols: | CCT motif family protein |
chr1:1221757-1224235 REVERSE LENGTH=386
Length = 386
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Query: 186 LEESNF-KVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARND 244
L++ +F KVG+ SAE+R+EKI +Y KR++R F+K IKYACRKTLAD+R R+RGRFA+ND
Sbjct: 272 LDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKND 331
Query: 245 ETSEVPRATCSTTAEEHEDNFWVEFVESL 273
E E R CS+ E+ +D+ V+ E L
Sbjct: 332 EFGEPNRQACSSHHEDDDDDVGVKEEEQL 360
>AT3G12890.1 | Symbols: ASML2 | activator of spomin::LUC2 |
chr3:4099223-4100277 FORWARD LENGTH=251
Length = 251
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 51/64 (79%)
Query: 185 LLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARND 244
+ E N KVGRYS EER+++I +Y K++QR FNKTIKY CRKTLAD R R+RGRFARN+
Sbjct: 123 IQAEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFARNN 182
Query: 245 ETSE 248
+T E
Sbjct: 183 DTCE 186
>AT2G33350.2 | Symbols: | CCT motif family protein |
chr2:14134116-14136836 FORWARD LENGTH=409
Length = 409
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 167 AGDLQNVKATHTPQTDSPL-------LEESNF-KVGRYSAEERREKISKYRAKRSQRKFN 218
G +N TPQ L LE+S KVG+ S E+R+EKI +Y KR++R FN
Sbjct: 268 GGGAENQSHLVTPQAHPALGPVDINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFN 327
Query: 219 KTIKYACRKTLADNRTRIRGRFARNDETSEVPR 251
K IKYACRKTLAD+R R+RGRFA+NDE E R
Sbjct: 328 KKIKYACRKTLADSRPRVRGRFAKNDEFGEPNR 360
>AT2G33350.1 | Symbols: | CCT motif family protein |
chr2:14134116-14136836 FORWARD LENGTH=410
Length = 410
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Query: 167 AGDLQNVKATHTPQTDSPL-------LEESNF-KVGRYSAEERREKISKYRAKRSQRKFN 218
G +N TPQ L LE+S KVG+ S E+R+EKI +Y KR++R FN
Sbjct: 269 GGGAENQSHLVTPQAHPALGPVDINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFN 328
Query: 219 KTIKYACRKTLADNRTRIRGRFARNDETSEVPR 251
K IKYACRKTLAD+R R+RGRFA+NDE E R
Sbjct: 329 KKIKYACRKTLADSRPRVRGRFAKNDEFGEPNR 361
>AT5G59990.1 | Symbols: | CCT motif family protein |
chr5:24151206-24153084 REVERSE LENGTH=241
Length = 241
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 159 GQIRRACSAGDL--QNVKATHTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRK 216
G +RRA SAGDL + + + T ++S + E K +YS EE++EKI KYR+KR+ R
Sbjct: 119 GPVRRALSAGDLPRSSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIEKYRSKRNLRN 178
Query: 217 FNKTIKYACRKTLADNRTRIRGRFARNDETSEVPRATCSTTAEEHEDNFWVEFVESLN 274
FNK IKY CRKTLAD+R RIRGRFARNDE S+ + D W F++S +
Sbjct: 179 FNKRIKYECRKTLADSRPRIRGRFARNDEISQQEQVDVMEAVVGDVDT-WASFLDSFS 235
>AT5G53420.1 | Symbols: | CCT motif family protein |
chr5:21673683-21675469 FORWARD LENGTH=264
Length = 264
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 18/129 (13%)
Query: 120 MQRSYS---CNSFDWKLHGDAFIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQNVKAT 176
MQ+S S +S DW + NF P+ F G +RRA S GD+Q + A
Sbjct: 149 MQKSVSSGNLSSMDWSHAQQETVMIQNF-------PDFDFGYG-MRRAFSEGDIQKLGAG 200
Query: 177 HTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRI 236
SPL + + ++E+RREK+S+Y+ K+S+R F + IKYACRK LAD++ R+
Sbjct: 201 LV---QSPL----DRIIVSCTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRV 253
Query: 237 RGRFARNDE 245
RGRFA+ +E
Sbjct: 254 RGRFAKTEE 262
>AT4G27900.2 | Symbols: | CCT motif family protein |
chr4:13890858-13892777 FORWARD LENGTH=261
Length = 261
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 123 SYSCNSFDWKLHGDAFIDS-PNFGRHALSSPENSFFTGQIRRACSAGDLQNVKATHTPQT 181
S + +S D H DA I P+F P + +RRA S D+Q + +T
Sbjct: 149 SGNLSSMDMVEHKDAVIQGFPDF-------PPVDY---GMRRAFSESDIQTLGTGNTGLV 198
Query: 182 DSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFA 241
S L + + ++E+RREK+S+YR K+S+R F + IKYACRK LAD++ RIRGRFA
Sbjct: 199 QSQL----DRIIISCTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFA 254
Query: 242 RNDE 245
+ +E
Sbjct: 255 KTEE 258
>AT4G27900.1 | Symbols: | CCT motif family protein |
chr4:13890858-13892777 FORWARD LENGTH=261
Length = 261
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 15/124 (12%)
Query: 123 SYSCNSFDWKLHGDAFIDS-PNFGRHALSSPENSFFTGQIRRACSAGDLQNVKATHTPQT 181
S + +S D H DA I P+F P + +RRA S D+Q + +T
Sbjct: 149 SGNLSSMDMVEHKDAVIQGFPDF-------PPVDY---GMRRAFSESDIQTLGTGNTGLV 198
Query: 182 DSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFA 241
S L + + ++E+RREK+S+YR K+S+R F + IKYACRK LAD++ RIRGRFA
Sbjct: 199 QSQL----DRIIISCTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFA 254
Query: 242 RNDE 245
+ +E
Sbjct: 255 KTEE 258
>AT5G53420.2 | Symbols: | CCT motif family protein |
chr5:21674700-21675469 FORWARD LENGTH=185
Length = 185
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 18/129 (13%)
Query: 120 MQRSYS---CNSFDWKLHGDAFIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQNVKAT 176
MQ+S S +S DW + NF P+ F G +RRA S GD+Q + A
Sbjct: 70 MQKSVSSGNLSSMDWSHAQQETVMIQNF-------PDFDFGYG-MRRAFSEGDIQKLGAG 121
Query: 177 HTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRI 236
SPL + + ++E+RREK+S+Y+ K+S+R F + IKYACRK LAD++ R+
Sbjct: 122 LV---QSPL----DRIIVSCTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRV 174
Query: 237 RGRFARNDE 245
RGRFA+ +E
Sbjct: 175 RGRFAKTEE 183
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 197 SAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDETSE 248
++ ER ++ +YR KR RKF KTI+YA RK A+ R RI+GRFA+ +T+E
Sbjct: 335 TSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNE 386
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 197 SAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDET 246
S+ +R ++ +YR KR RKF KTI+YA RK A++R RI+GRFA+ ET
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTET 330
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 178 TPQTDSPLLEESNFKVG----------RYSAEERREKISKYRAKRSQRKFNKTIKYACRK 227
T D PL+ ES + S ER ++ +YR KR RKF KTI+YA RK
Sbjct: 196 TRTIDVPLVPESGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRK 255
Query: 228 TLADNRTRIRGRFARNDETSE 248
A+ R RI+GRFA+ ++ E
Sbjct: 256 AYAEMRPRIKGRFAKRTDSRE 276
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 197 SAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDETSE 248
S +R ++ +YR K+ RKF KTI+YA RK A+ R RI+GRFA+ + E
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDE 333
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 193 VGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFAR 242
V + + ER ++ +YR K+ RKF+KTI+YA RK A+ R RI+GRFA+
Sbjct: 270 VQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 191 FKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDETSE 248
V + S +R ++ +YR KR RKF KTI+YA RK A+ R R+ GRFA+ + +E
Sbjct: 296 ITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKREIEAE 353
>AT5G24470.1 | Symbols: APRR5, PRR5 | pseudo-response regulator 5 |
chr5:8356204-8358873 REVERSE LENGTH=667
Length = 667
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 162 RRACSAGDLQNVKATHTPQTDSPLLEESN-----FKVGRYSAEERREK-ISKYRAKRSQR 215
RR S+ + H Q L+E+ N VG+ +RE ++K+R KR R
Sbjct: 577 RRYVSSATEHSAIGNHIDQ----LIEKKNEDGYSLSVGKIQQSLQREAALTKFRMKRKDR 632
Query: 216 KFNKTIKYACRKTLADNRTRIRGRFARNDETSEVP 250
+ K ++Y RK LA+ R RI+G+F R ++++ P
Sbjct: 633 CYEKKVRYESRKKLAEQRPRIKGQFVRQVQSTQAP 667
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 166 SAGDLQNVKATHTPQTDS------PLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNK 219
SAGD Q A+ + Q P L+++N + R + +Y+ K+ RKF+K
Sbjct: 277 SAGDFQECGASSSIQLSGEPPWYPPTLQDNN---ACSHSVTRNNAVMRYKEKKKARKFDK 333
Query: 220 TIKYACRKTLADNRTRIRGRFARNDET 246
++YA RK AD R R++GRF + E
Sbjct: 334 RVRYASRKARADVRRRVKGRFVKAGEA 360
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 166 SAGDLQNVKATHTPQTDS------PLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNK 219
SAGD Q A+ + Q P L+++N + R + +Y+ K+ RKF+K
Sbjct: 277 SAGDFQECGASSSIQLSGEPPWYPPTLQDNN---ACSHSVTRNNAVMRYKEKKKARKFDK 333
Query: 220 TIKYACRKTLADNRTRIRGRFARNDET 246
++YA RK AD R R++GRF + E
Sbjct: 334 RVRYASRKARADVRRRVKGRFVKAGEA 360
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 166 SAGDLQNVKATHTPQTDS------PLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNK 219
SAGD Q A+ + Q P L+++N + R + +Y+ K+ RKF+K
Sbjct: 277 SAGDFQECGASSSIQLSGEPPWYPPTLQDNN---ACSHSVTRNNAVMRYKEKKKARKFDK 333
Query: 220 TIKYACRKTLADNRTRIRGRFARNDET 246
++YA RK AD R R++GRF + E
Sbjct: 334 RVRYASRKARADVRRRVKGRFVKAGEA 360
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 166 SAGDLQNVKATHTPQTDS------PLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNK 219
SAGD Q A+ + Q P L+++N + R + +Y+ K+ RKF+K
Sbjct: 277 SAGDFQECGASSSIQLSGEPPWYPPTLQDNN---ACSHSVTRNNAVMRYKEKKKARKFDK 333
Query: 220 TIKYACRKTLADNRTRIRGRFARNDET 246
++YA RK AD R R++GRF + E
Sbjct: 334 RVRYASRKARADVRRRVKGRFVKAGEA 360
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19232874-19234901 FORWARD LENGTH=468
Length = 468
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 175 ATHTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRT 234
A + T+ P EES + R+S +R + K+R KR R F+K ++Y RK LA+ R
Sbjct: 393 AGQSSSTEKPKEEESAKQ--RWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRP 450
Query: 235 RIRGRFAR 242
R++G+F R
Sbjct: 451 RVKGQFVR 458
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1, AtTOC1 | CCT motif
-containing response regulator protein |
chr5:24675540-24678176 FORWARD LENGTH=618
Length = 618
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 170 LQNVKATHTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTL 229
LQN + + + SP + +V + R E + K+R KR+QR F+K I+Y RK L
Sbjct: 502 LQNGQMSMVHHSWSPAGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRL 561
Query: 230 ADNRTRIRGRFAR 242
A+ R R++G+F R
Sbjct: 562 AERRPRVKGQFVR 574
>AT1G28050.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:9775768-9777657 REVERSE LENGTH=433
Length = 433
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 198 AEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDE 245
A+ R + + +Y+ KR R+++KTI+Y RK AD R R+RGRF + E
Sbjct: 382 AQNRGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVRGRFVKASE 429
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 184 PLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFAR 242
P++ + ++ ER +S+Y+ K+ R++ K I+Y RK A++RTRIRGRFA+
Sbjct: 270 PVITSTRSMTHEINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | pseudo-response regulator
9 | chr2:19233422-19234901 FORWARD LENGTH=351
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 175 ATHTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRT 234
A + T+ P EES + R+S +R + K+R KR R F+K ++Y RK LA+ R
Sbjct: 276 AGQSSSTEKPKEEESAKQ--RWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRP 333
Query: 235 RIRGRFAR 242
R++G+F R
Sbjct: 334 RVKGQFVR 341
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 188 ESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFAR 242
E+NF+V + R E +Y+ K+ +R F K I+YA RK AD R R++GRF +
Sbjct: 296 ETNFEVS--CPQARNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVKGRFVK 348
>AT2G46670.1 | Symbols: | CCT motif family protein |
chr2:19164589-19165233 REVERSE LENGTH=183
Length = 183
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 175 ATHTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRT 234
A + T+ P EES + R+S +R + K+R KR R F+K ++Y RK LA+ R
Sbjct: 108 AGQSSSTEKPKEEESAKQ--RWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRP 165
Query: 235 RIRGRFAR 242
R++G+F R
Sbjct: 166 RVKGQFVR 173