Miyakogusa Predicted Gene

Lj2g3v2017660.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2017660.3 tr|G7KC36|G7KC36_MEDTR Lysine-specific
demethylase 5D OS=Medicago truncatula GN=MTR_5g010300 PE=4
SV,73.76,0,seg,NULL; PHD zinc finger,Zinc finger, PHD-type; FYVE/PHD
zinc finger,Zinc finger, FYVE/PHD-type; PL,CUFF.38469.3
         (685 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63490.1 | Symbols:  | transcription factor jumonji (jmjC) do...   265   6e-71

>AT1G63490.1 | Symbols:  | transcription factor jumonji (jmjC)
           domain-containing protein | chr1:23544938-23551946
           REVERSE LENGTH=1116
          Length = 1116

 Score =  265 bits (678), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 161/440 (36%), Positives = 268/440 (60%), Gaps = 28/440 (6%)

Query: 22  RKCISAKDPAALEVDFLYKLKSEITDLQVLLPETDELQNLLCQAESCSAQCRDMLESPMN 81
           ++ ++   P  +E+D L+KL SE+ +L V LPET+ + +L+ ++ES   +   +L   ++
Sbjct: 535 KRYLTDAKPPGIEMDALFKLNSEMLELHVQLPETEGILDLVKKSESARDKSNKVLTGSLS 594

Query: 82  LKSVGLLLKDWDNFTVDVPELKLLRHYYSDAISWVSCFNDVLGRAHEQEDQCNAVDELKR 141
           L++V  LL ++D+F+++VPEL +LR Y+ D +SW+S FNDV+    E +DQ   + +L  
Sbjct: 595 LENVEELLHEFDSFSINVPELNILRQYHVDTLSWISRFNDVMVDVREGKDQRKLISDLSS 654

Query: 142 IFDEGLSLKIQVDELPLVEIELKKAYCREKAFKALDSKMSLEFIQELLDEATMLEIKGEK 201
           +  +G SL IQV+ LPLVE+ELKKA CREKA     ++ SL+FI++LL EA +L I+ E+
Sbjct: 655 LLRDGASLGIQVEGLPLVEVELKKASCREKARTVYTARKSLDFIEQLLSEAVILHIEEEE 714

Query: 202 EFVNLSSVLGVALPWEERAREILSHEASISDFEDMIRASENIFAMLPSLNYVKEALSEAN 261
            FV +S +L  A  WEERA  IL +E  + + +D++R S NI A+LP+L  ++  +S A 
Sbjct: 715 IFVEISGILSTARCWEERASTILENETQMYELKDLVRMSVNIDAVLPTLQGIENTISSAE 774

Query: 262 IWLRSSKPYL--VSTCASS--SLRTVEELKMLVSQSKRLKISMEERRTLELVLNNCKIWE 317
            WL+ S+P+L   S+ ASS  S+  +  LK LV+Q+K L + ++E R LE +L NC+ W+
Sbjct: 775 TWLQKSEPFLSATSSMASSPCSMLELPVLKDLVTQAKLLNVQLQEPRILETLLLNCERWQ 834

Query: 318 YEACSLLDDARHLFE---LDNTVHEISSDLMSRVEDLITRIQSAIASGVSLGFDFSDISK 374
            +   LL +   L +   +D+  H   S+++ ++ DLITR+ SA  SG++LG +F ++ K
Sbjct: 835 CDNHQLLQETEDLLDNAKIDDGTH---SNILPKIMDLITRVDSARRSGLALGLNFDELPK 891

Query: 375 LEASCSTLRWCKRALSFCNYSPS---LEDVLEVA-EALSDSSVSGALLKVLV-------- 422
           L  +   L WC + ++  + SP+   LEDV + + + +      G  L++L         
Sbjct: 892 LRTASLKLGWCCKTITLSSSSPTSELLEDVGKPSLQHIQQHLKEGQTLEILPEEYYLGKR 951

Query: 423 ------NGVEWLRRATEGIS 436
                  G+EW +RA + ++
Sbjct: 952 LMELKDTGLEWAKRARKVVT 971