Miyakogusa Predicted Gene

Lj2g3v2017500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2017500.1 tr|Q6H7R8|Q6H7R8_ORYSJ Os02g0642200 protein
OS=Oryza sativa subsp. japonica GN=OJ1112_G03.12 PE=2
SV,60.87,5e-19,Remorin_C,Remorin, C-terminal; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL,CUFF.38427.1
         (182 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23750.2 | Symbols:  | Remorin family protein | chr5:8010004-...   150   6e-37
AT5G23750.1 | Symbols:  | Remorin family protein | chr5:8010004-...   149   1e-36
AT3G48940.1 | Symbols:  | Remorin family protein | chr3:18142863...   141   2e-34
AT3G61260.1 | Symbols:  | Remorin family protein | chr3:22675403...   138   3e-33
AT2G45820.1 | Symbols:  | Remorin family protein | chr2:18863147...   123   7e-29
AT1G63295.1 | Symbols:  | Remorin family protein | chr1:23474129...    87   8e-18
AT4G00670.1 | Symbols:  | Remorin family protein | chr4:278434-2...    70   8e-13
AT3G57540.1 | Symbols:  | Remorin family protein | chr3:21301623...    55   2e-08
AT1G30320.1 | Symbols:  | Remorin family protein | chr1:10680348...    55   3e-08
AT2G41870.1 | Symbols:  | Remorin family protein | chr2:17471119...    54   8e-08
AT1G67590.1 | Symbols:  | Remorin family protein | chr1:25333137...    51   5e-07

>AT5G23750.2 | Symbols:  | Remorin family protein |
           chr5:8010004-8011453 REVERSE LENGTH=201
          Length = 201

 Score =  150 bits (378), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/132 (59%), Positives = 104/132 (78%), Gaps = 4/132 (3%)

Query: 51  PIVQNVADDDAKKVTGDSVDRDAALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVG 110
           P+V  V ++  +     SV+RDA LARV TEKR++LIKAWEE+EK K EN+A KK S++G
Sbjct: 64  PVVPKVEEEKKE----GSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIG 119

Query: 111 LWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLE 170
            WE ++KA++EAELKK+EE LE+KKAEY E+MKNKIA+IH+ AEEKRA +EA + EE L+
Sbjct: 120 SWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILK 179

Query: 171 VEETAAKFRSRG 182
            EE AAK+R+ G
Sbjct: 180 AEELAAKYRATG 191


>AT5G23750.1 | Symbols:  | Remorin family protein |
           chr5:8010004-8011453 REVERSE LENGTH=202
          Length = 202

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/115 (66%), Positives = 97/115 (84%)

Query: 68  SVDRDAALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKI 127
           SV+RDA LARV TEKR++LIKAWEE+EK K EN+A KK S++G WE ++KA++EAELKK+
Sbjct: 78  SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKM 137

Query: 128 EENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
           EE LE+KKAEY E+MKNKIA+IH+ AEEKRA +EA + EE L+ EE AAK+R+ G
Sbjct: 138 EEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATG 192


>AT3G48940.1 | Symbols:  | Remorin family protein |
           chr3:18142863-18144163 REVERSE LENGTH=175
          Length = 175

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 103/147 (70%), Gaps = 13/147 (8%)

Query: 49  PSPIVQNVADDDAKKV---------TGD----SVDRDAALARVVTEKRLALIKAWEESEK 95
           PSP  +    DD+K +         T D    SV RDA L R+  +KR++LIKAWEE+EK
Sbjct: 19  PSPPSKEEKSDDSKAIVLVVAAKEPTEDKKVGSVHRDAVLVRLEQDKRISLIKAWEEAEK 78

Query: 96  TKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAEIHQAAEE 155
           +K EN+A KK S+VG WE S+KAS+EAELKKIEE L +KKA Y E+MKNKIA+IH+ AEE
Sbjct: 79  SKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEE 138

Query: 156 KRATVEANKKEEFLEVEETAAKFRSRG 182
           KRA  EA + E+ L+ EE AAK+R+ G
Sbjct: 139 KRAMTEAKRGEDVLKAEEMAAKYRATG 165


>AT3G61260.1 | Symbols:  | Remorin family protein |
           chr3:22675403-22676701 REVERSE LENGTH=212
          Length = 212

 Score =  138 bits (347), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/120 (60%), Positives = 95/120 (79%)

Query: 63  KVTGDSVDRDAALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEA 122
           K    S+DRD  LA +  EKRL+ ++AWEESEK+KAEN+A KK + V  WE S+KA++EA
Sbjct: 83  KPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEA 142

Query: 123 ELKKIEENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
           +LKKIEE LE+KKAEYAE+MKNK+A IH+ AEE+RA +EA + E+ L+ EETAAK+R+ G
Sbjct: 143 QLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATG 202


>AT2G45820.1 | Symbols:  | Remorin family protein |
           chr2:18863147-18864576 REVERSE LENGTH=190
          Length = 190

 Score =  123 bits (308), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/121 (61%), Positives = 92/121 (76%)

Query: 62  KKVTGDSVDRDAALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIE 121
           KK +  S DRD  LA +  EK+ + IKAWEESEK+KAENRA KK S V  WE S+KA++E
Sbjct: 60  KKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVE 119

Query: 122 AELKKIEENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSR 181
           A+L+KIEE LE+KKA+Y EKMKNK+A IH+ AEEKRA VEA K EE L+ EE  AK+R+ 
Sbjct: 120 AQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRAT 179

Query: 182 G 182
           G
Sbjct: 180 G 180


>AT1G63295.1 | Symbols:  | Remorin family protein |
           chr1:23474129-23475300 REVERSE LENGTH=151
          Length = 151

 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/104 (46%), Positives = 73/104 (70%)

Query: 75  LARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERK 134
           L  +  EKRLALI AWEE+EK KA+ +AYK+  ++  WE + K ++E +LKK+EENL+ +
Sbjct: 31  LVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKMEENLQVE 90

Query: 135 KAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKF 178
           K E+++K K KI EI + AE KR  +E  K++E ++VE+ + K 
Sbjct: 91  KTEFSKKFKKKIPEIEKIAEAKREKIEKQKEQESIKVEKISEKL 134


>AT4G00670.1 | Symbols:  | Remorin family protein |
           chr4:278434-279170 REVERSE LENGTH=123
          Length = 123

 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 64/97 (65%)

Query: 86  LIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNK 145
           +IKAW+E + TK  N+  KK   +  WE+ +   IE+EL +I+  ++ KK E +EK++N+
Sbjct: 16  VIKAWKELKITKVNNKTQKKLLDISGWEKKKTTKIESELARIQRKMDSKKMEKSEKLRNE 75

Query: 146 IAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
            A +H  A++K+A V+  + +E L+ EE AA+F++ G
Sbjct: 76  KAAVHAKAQKKKADVQTRRAQEILDAEEAAARFQAAG 112


>AT3G57540.1 | Symbols:  | Remorin family protein |
           chr3:21301623-21302924 REVERSE LENGTH=296
          Length = 296

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%)

Query: 73  AALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLE 132
           A++ RV  E+  A I AW+ ++  K  NR  ++ + +  W   +     + +KKIE  LE
Sbjct: 175 ASVQRVKREEVEAKITAWQTAKVAKINNRFKRQDAVINGWLNEQVHRANSWMKKIERKLE 234

Query: 133 RKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
            ++A+  EK +NK+A+  + AEE+RAT E  +  E   V E A   R+ G
Sbjct: 235 DRRAKAMEKTQNKVAKAQRKAEERRATAEGKRGTEVARVLEVANLMRAVG 284


>AT1G30320.1 | Symbols:  | Remorin family protein |
           chr1:10680348-10682852 FORWARD LENGTH=509
          Length = 509

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 48/76 (63%)

Query: 89  AWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAE 148
           AWEE+EK+K   R  +++  +  WE   KA +EAE+++IE  +E+ KAE   K+  KIA 
Sbjct: 401 AWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRIEAKVEQMKAEAEAKIMKKIAL 460

Query: 149 IHQAAEEKRATVEANK 164
             Q +EEKRA  EA K
Sbjct: 461 AKQRSEEKRALAEARK 476


>AT2G41870.1 | Symbols:  | Remorin family protein |
           chr2:17471119-17472519 REVERSE LENGTH=274
          Length = 274

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%)

Query: 73  AALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLE 132
           + + RV  E+  A I AW+ ++  K  NR  ++ + +  W   +     + +KKIE  LE
Sbjct: 153 STVQRVKREEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLE 212

Query: 133 RKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
            +KA+  EK +N +A+  + AEE+RAT EA +  E  +V E A   R+ G
Sbjct: 213 ERKAKAMEKTQNNVAKAQRKAEERRATAEAKRGTEVAKVVEVANLMRALG 262


>AT1G67590.1 | Symbols:  | Remorin family protein |
           chr1:25333137-25334472 REVERSE LENGTH=347
          Length = 347

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 51/94 (54%)

Query: 89  AWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAE 148
           AW+E+E+ K   R  +++  +  WE   K   E E+KK+E   ER KA   EK+ NK+A 
Sbjct: 235 AWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAEEKLANKLAA 294

Query: 149 IHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
             + AEE+RA  EA   E+ ++  E A   R  G
Sbjct: 295 TKRIAEERRANAEAKLNEKAVKTSEKADYIRRSG 328