Miyakogusa Predicted Gene

Lj2g3v2017360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2017360.1 Non Chatacterized Hit- tr|I1NGQ8|I1NGQ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,50,4e-19,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL; IQ,IQ
motif, EF-hand binding si,CUFF.38416.1
         (218 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23060.1 | Symbols: IQD22 | IQ-domain 22 | chr4:12087283-1209...    49   2e-06

>AT4G23060.1 | Symbols: IQD22 | IQ-domain 22 |
           chr4:12087283-12090408 FORWARD LENGTH=484
          Length = 484

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 91  EWAAVKIQAAFXXXXXXXXXXXXXXXXXXQALVRGHIERKRTKEWVQRVXXXXXXXXXXX 150
           E A +KIQ+ F                  QA+VRGHIERKR    ++R+           
Sbjct: 167 ELAVIKIQSIFRGYLAKRALRALKGLVRLQAIVRGHIERKRMSVHLRRMHALVRAQARVR 226

Query: 151 XXXGQILDQASFHIAKS-----FTGPLHGPVTPEKFESPISSESVKYSQSPALKRNISKS 205
                +  ++S   + +     F  P  GP TPEK E  ISS S K + S   KRN SK+
Sbjct: 227 ATRVIVTPESSSSQSNNTKSSHFQNP--GPPTPEKLEHSISSRSSKLAHSHLFKRNGSKA 284



 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 7/55 (12%)

Query: 1  MGKASKWFRGLLGMRTPD-------XXXXXXXXXXXEKRRWSLVKSYREKDNHPV 48
          MGKAS+WFR L G++ PD                   KRRWS VKS REK++ P+
Sbjct: 1  MGKASRWFRSLFGVKKPDPGYPDLSVETPSRSTSSNLKRRWSFVKSKREKESTPI 55