Miyakogusa Predicted Gene

Lj2g3v2014190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2014190.1 Non Chatacterized Hit- tr|J4I9X7|J4I9X7_9APHY
Uncharacterized protein OS=Fibroporia radiculosa PE=4
,31.94,0.7,seg,NULL; PH domain-like,NULL; NUCLEOPORIN 50,NULL; no
description,Pleckstrin homology-like domain,CUFF.38418.1
         (100 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11790.1 | Symbols:  | Pleckstrin homology (PH) domain superf...   111   1e-25

>AT4G11790.1 | Symbols:  | Pleckstrin homology (PH) domain
           superfamily protein | chr4:7090456-7093208 FORWARD
           LENGTH=443
          Length = 443

 Score =  111 bits (277), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/99 (59%), Positives = 72/99 (72%), Gaps = 6/99 (6%)

Query: 2   GQLSIKCKEGVSKATRESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSVVAIFHTXXXX 61
           G L IKCKEGV K T+ESKPTI+VRN+VGK+LLNALLY G+KT+ QKN++VAIFH+    
Sbjct: 351 GNLYIKCKEGVDKGTKESKPTILVRNDVGKLLLNALLYAGMKTSPQKNALVAIFHS---- 406

Query: 62  XXXXXXXXXVVARTFLIRMKTEDDRNKLASTIQEYAPTS 100
                    V  RTFLIR K  + R+ LA+ IQEYAP+S
Sbjct: 407 --SDDSNENVTPRTFLIRTKNAEARDNLATAIQEYAPSS 443