Miyakogusa Predicted Gene

Lj2g3v2003060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2003060.1 Non Chatacterized Hit- tr|I1JA20|I1JA20_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47739 PE,76.21,0,NF-E2
INDUCIBLE PROTEIN,Protein of unknown function DUF544; seg,NULL;
DUF544,Protein of unknown func,CUFF.38402.1
         (720 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G11860.1 | Symbols:  | Protein of unknown function (DUF544)  ...   348   8e-96
AT4G22960.1 | Symbols:  | Protein of unknown function (DUF544)  ...   130   4e-30

>AT4G11860.1 | Symbols:  | Protein of unknown function (DUF544)     
           | chr4:7134237-7138361 REVERSE LENGTH=682
          Length = 682

 Score =  348 bits (893), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 173/250 (69%), Positives = 199/250 (79%), Gaps = 8/250 (3%)

Query: 16  QEPPHQQPL-------KDCLHKTKTVQFLGRTTPIVLQNDNGPCPLLAICXXXXXXXXXX 68
           QE   QQ L       ++ L+KTK++QFLGRTTPI+LQN+NGPCPLLAIC          
Sbjct: 18  QEAMQQQDLPKETTTEEEILYKTKSIQFLGRTTPIILQNENGPCPLLAICNVLLLRNNLN 77

Query: 69  XSPDIPEVSQEKLLSLVAERLIDSNSNVNNKDEGYVENQQQNIADAIDLLPRLATGIDVN 128
            +PD  EVSQE+L+SLV +RLIDSNS VNNKDEGY+ENQQQNIADAIDLLPRL TGIDVN
Sbjct: 78  LNPDCYEVSQERLMSLVVDRLIDSNSKVNNKDEGYIENQQQNIADAIDLLPRLTTGIDVN 137

Query: 129 VKFRRIADFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNALTGELVSLDTE 188
           +KFRRI DFEFT ECAIFDLLDIPLYHGWIVDPQD + ANAIGSKSYNAL GELV+L+T+
Sbjct: 138 IKFRRIDDFEFTPECAIFDLLDIPLYHGWIVDPQDVEAANAIGSKSYNALMGELVALETQ 197

Query: 189 NIGIQPKSNLEEDCVDFVAATTAALGVPSPSLSKTRSFDDSPHSVSD-QLPRKGDIEEEA 247
           N+  Q   N  ED VDF AATTA LGVPSP LSKTRSFDDSP + ++ +  RKGD+EEE 
Sbjct: 198 NVEAQGDQNPGEDSVDFAAATTAVLGVPSPCLSKTRSFDDSPPAAAELRRMRKGDLEEET 257

Query: 248 EFLRALKLSE 257
           E L+AL+LS+
Sbjct: 258 ELLQALQLSQ 267


>AT4G22960.1 | Symbols:  | Protein of unknown function (DUF544)     
           | chr4:12030121-12033105 FORWARD LENGTH=524
          Length = 524

 Score =  130 bits (326), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 105/173 (60%), Gaps = 16/173 (9%)

Query: 494 EPVYEGEMVLAEQADKNTLAVPDLKAKDGLTPEQGELIKSFLRNNASQLTFYGLFCLQDG 553
           + VYE + +L + +       P+ K   GLT E+GELIK F   + +QLT++GLF L+D 
Sbjct: 333 QSVYEVQSLLGQSS-------PEGKGTKGLTQEEGELIKGFFEESVTQLTWHGLFTLEDD 385

Query: 554 LKERELCVFFRNNHFSTMFKFEGELYLLATDQGYINQPDLVWEKLNEVNGDTLFMTSNFK 613
           LKE ELCV FRNNHF+TM + E  LY L T +GY  Q DLVWE+ N+++GD+ F T  F 
Sbjct: 386 LKEWELCVLFRNNHFATMLQHEERLYTLVTYEGYQMQQDLVWERFNKIDGDSAFFTGYFT 445

Query: 614 EFKVESHENNNWDENNAMTSTADYLASIESASQAGLDVNSDLQLAIALQQQEF 666
           +F  +       D+ +A++ T + ++ I+S +    +   D  LA+ L+Q ++
Sbjct: 446 KFIFK-------DQQHAISKTENSISRIKSENMDTTEF--DRLLALELEQNDW 489



 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 155/347 (44%), Gaps = 76/347 (21%)

Query: 23  PLKDCLHKTKTVQFLGRTTPIVLQNDNGPCPLLAICXXXXXXXXXXXSPDIPEVSQEKLL 82
           P  +  +KTK + + G+   I+LQ+ NGPCPL+AIC                +VS+E L+
Sbjct: 9   PPDEIFYKTKKILYRGQRCNIILQDKNGPCPLIAICNVLILKHGINLDTYNSQVSEEDLV 68

Query: 83  SLVAERLIDSNSNVNNKDEGYVENQQQNIADAIDLLPRLATGIDVNVKFRRIADFEFTRE 142
           +LV + L D++  ++                 I L+ +LA GI+V++KF RI DFE T E
Sbjct: 69  NLVIDVLDDTDEYID-----------------IGLIRKLACGINVDLKFERITDFELTPE 111

Query: 143 CAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNALTGELVSLDTENIGIQPKSNLEEDC 202
             IF  L IPLYHGW+VDP D +   AIG +S + L   L +LDT+ +            
Sbjct: 112 LDIFRSLKIPLYHGWLVDPTDVEIVAAIGGRSRDELEIALTTLDTQTVS----------S 161

Query: 203 VDFVAATTAALGVPSPSLSKTRSFDDSPHSVSDQLPRKGDIEEEAEFLRALKLSEVDCKA 262
           VDF AA+   LG+                        KGDIEE+    +AL LSE++   
Sbjct: 162 VDF-AASAEHLGLG-----------------------KGDIEEDEMVSKALALSEMEASL 197

Query: 263 SISDPVVGHVNGDGGAVSASMDEDMCNKQVKTVDSEDKLGKSAGA---------EDNSSH 313
             S      V+G       S D+ +    V +VD E     + G+         +  SS 
Sbjct: 198 KGSFDTQRVVSGSLDVNQISEDDTL----VTSVDIEAGCATTLGSNICQLSKFDDQFSST 253

Query: 314 ESEPSISDDCAASGKDCNEHASSASTLG-------ETDNSSLKNDAI 353
           ESE     DC    K       S++ LG       ET+NSS   D +
Sbjct: 254 ESE-----DCDVGNKTNVGEEVSSTELGDETFGNVETENSSKMTDVL 295