Miyakogusa Predicted Gene
- Lj2g3v2002840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2002840.1 CUFF.38390.1
(313 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79870.1 | Symbols: | D-isomer specific 2-hydroxyacid dehydr... 434 e-122
AT1G79870.2 | Symbols: | D-isomer specific 2-hydroxyacid dehydr... 390 e-109
AT1G12550.1 | Symbols: | D-isomer specific 2-hydroxyacid dehydr... 278 3e-75
AT2G45630.2 | Symbols: | D-isomer specific 2-hydroxyacid dehydr... 239 1e-63
AT1G68010.1 | Symbols: HPR, ATHPR1 | hydroxypyruvate reductase |... 115 5e-26
AT4G34200.1 | Symbols: EDA9 | D-3-phosphoglycerate dehydrogenase... 114 7e-26
AT1G17745.1 | Symbols: PGDH | D-3-phosphoglycerate dehydrogenase... 114 8e-26
AT1G68010.2 | Symbols: HPR | hydroxypyruvate reductase | chr1:25... 110 1e-24
AT3G19480.1 | Symbols: | D-3-phosphoglycerate dehydrogenase | c... 108 6e-24
AT1G72190.1 | Symbols: | D-isomer specific 2-hydroxyacid dehydr... 99 3e-21
AT5G14780.1 | Symbols: FDH | formate dehydrogenase | chr5:477704... 99 3e-21
AT1G17745.2 | Symbols: PGDH | D-3-phosphoglycerate dehydrogenase... 99 3e-21
AT5G28310.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 85 8e-17
AT2G45630.1 | Symbols: | D-isomer specific 2-hydroxyacid dehydr... 69 4e-12
AT1G01510.1 | Symbols: AN | NAD(P)-binding Rossmann-fold superfa... 69 5e-12
>AT1G79870.1 | Symbols: | D-isomer specific 2-hydroxyacid
dehydrogenase family protein | chr1:30044794-30045851
FORWARD LENGTH=313
Length = 313
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/313 (69%), Positives = 256/313 (81%)
Query: 1 MESIGVLLVRRLQPYLEQELEKRYKVFRTWDYPQKSQLLSHHAASIRAIVCHARAGADXX 60
MESIGVL++ + YLE ELEKR+ + R W P+KS LL H SIRA+V +A AGAD
Sbjct: 1 MESIGVLMMCPMSSYLENELEKRFNLLRFWTSPEKSVLLETHRNSIRAVVGNASAGADAQ 60
Query: 61 XXXXXXXXXXVSNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRIC 120
VS++ VG+DKIDL KC+EKG+RVT TPDVLT+DVADLAIGLIL LLRR+C
Sbjct: 61 LISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLC 120
Query: 121 ECDGYVRSGQWKKGDYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICYYSRTEKPE 180
ECD YVRSG+WK+G+++LTTKFSGK+VGI+GLGRIG AIAKRAE F+CPI YYSRT KP+
Sbjct: 121 ECDRYVRSGKWKQGEFQLTTKFSGKSVGIIGLGRIGTAIAKRAEAFSCPINYYSRTIKPD 180
Query: 181 SKYKYYPSVVELASNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAE 240
YKYYP+VV+LA N DILVVAC LT++T HI++R+V+DALG+KG LINIGRG HVDE E
Sbjct: 181 VAYKYYPTVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLINIGRGPHVDEQE 240
Query: 241 LVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLVPHAGPATVETRFAMAELVLGNLE 300
L+ AL EGRLGGA LDVFE EPHVPEELFGLENVVL+PH G TVETR AMA+LV+GNLE
Sbjct: 241 LIKALTEGRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMADLVVGNLE 300
Query: 301 AHFLGKPLLTPLV 313
AHF GK LLTP+V
Sbjct: 301 AHFSGKSLLTPVV 313
>AT1G79870.2 | Symbols: | D-isomer specific 2-hydroxyacid
dehydrogenase family protein | chr1:30044794-30045851
FORWARD LENGTH=294
Length = 294
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/313 (65%), Positives = 237/313 (75%), Gaps = 19/313 (6%)
Query: 1 MESIGVLLVRRLQPYLEQELEKRYKVFRTWDYPQKSQLLSHHAASIRAIVCHARAGADXX 60
MESIGVL++ + YLE ELEKR+ + R W P+KS LL H SIRA+V +A AGAD
Sbjct: 1 MESIGVLMMCPMSSYLENELEKRFNLLRFWTSPEKSVLLETHRNSIRAVVGNASAGADAQ 60
Query: 61 XXXXXXXXXXVSNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRIC 120
VS++ VG+DKIDL KC+EKG+RVT TPDVLT+DVADLAIGLIL LLRR+C
Sbjct: 61 LISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADLAIGLILALLRRLC 120
Query: 121 ECDGYVRSGQWKKGDYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICYYSRTEKPE 180
ECD YVRSG+WK+G RIG AIAKRAE F+CPI YYSRT KP+
Sbjct: 121 ECDRYVRSGKWKQG-------------------RIGTAIAKRAEAFSCPINYYSRTIKPD 161
Query: 181 SKYKYYPSVVELASNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAE 240
YKYYP+VV+LA N DILVVAC LT++T HI++R+V+DALG+KG LINIGRG HVDE E
Sbjct: 162 VAYKYYPTVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLINIGRGPHVDEQE 221
Query: 241 LVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLVPHAGPATVETRFAMAELVLGNLE 300
L+ AL EGRLGGA LDVFE EPHVPEELFGLENVVL+PH G TVETR AMA+LV+GNLE
Sbjct: 222 LIKALTEGRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGTVETRNAMADLVVGNLE 281
Query: 301 AHFLGKPLLTPLV 313
AHF GK LLTP+V
Sbjct: 282 AHFSGKSLLTPVV 294
>AT1G12550.1 | Symbols: | D-isomer specific 2-hydroxyacid
dehydrogenase family protein | chr1:4274649-4275831
FORWARD LENGTH=323
Length = 323
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/301 (46%), Positives = 193/301 (64%), Gaps = 3/301 (0%)
Query: 15 YLEQELEKRYKVFRTWDYPQKS--QLLSHHAASIRAIVCHARAGADXXXXXXXXXXXXVS 72
++++ L + ++ T +S HA+S RA V R +
Sbjct: 20 FMDEILTREFRTLITDTSSSESLPSFFPRHASSARAFVISGRLPVTDELLSHLPSLQILV 79
Query: 73 NYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQWK 132
VG+D IDL C+ +G+ +T + +DDVAD A+GL++++LRRI D YVRSG W
Sbjct: 80 CTSVGIDHIDLAACKRRGIVITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRSGNWA 139
Query: 133 K-GDYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICYYSRTEKPESKYKYYPSVVE 191
K GD++L +K SGK VGIVGLG IG +AKR E F C I Y SR++K S Y+YY ++
Sbjct: 140 KFGDFQLGSKVSGKRVGIVGLGSIGSFVAKRLESFGCVISYNSRSQKQSSPYRYYSDILS 199
Query: 192 LASNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAELVSALVEGRLG 251
LA N D+LV+ CSLT ETHHI+NR+V++ LG G +IN+GRG +DE E+V LV+G +G
Sbjct: 200 LAENNDVLVLCCSLTDETHHIVNREVMELLGKDGVVINVGRGKLIDEKEMVKCLVDGVIG 259
Query: 252 GAGLDVFENEPHVPEELFGLENVVLVPHAGPATVETRFAMAELVLGNLEAHFLGKPLLTP 311
GAGLDVFENEP VP+ELFGL+NVVL PH AT + +A++ L NL+A F +PLL+P
Sbjct: 260 GAGLDVFENEPAVPQELFGLDNVVLSPHFAVATPGSLDNVAQIALANLKAFFSNRPLLSP 319
Query: 312 L 312
+
Sbjct: 320 V 320
>AT2G45630.2 | Symbols: | D-isomer specific 2-hydroxyacid
dehydrogenase family protein | chr2:18796000-18797089
FORWARD LENGTH=338
Length = 338
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 179/294 (60%), Gaps = 3/294 (1%)
Query: 23 RYKVFRTWDYPQK-SQLLSHHAASIRAIVCHARAGADXXXXXXXXXXXXVSNYGVGVDKI 81
++++ + ++ P + L++H+ SI AI+ A V GVD +
Sbjct: 45 KFEILKAFESPLPLPEFLAYHSDSISAIIAPVAAPVTADLIRILPNLRLVVTTSAGVDHV 104
Query: 82 DLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQWK-KGDYKLTT 140
DL +CR +G+ V ++DVAD A+GL++ + RRI + +V+ W KGDY L +
Sbjct: 105 DLVECRRRGISVANAGSSFSEDVADTAVGLLIDVFRRISAANRFVKQRFWPLKGDYPLGS 164
Query: 141 KFSGKTVGIVGLGRIGVAIAKRAEGFNCPICYYSRTEKP-ESKYKYYPSVVELASNCDIL 199
K K +GIVGLG IG +A R + F C I Y SR KP + Y YY + E+A+N D L
Sbjct: 165 KLGRKRIGIVGLGSIGSKVATRLDAFGCQISYSSRNRKPYDVPYHYYMDIEEMAANSDAL 224
Query: 200 VVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAELVSALVEGRLGGAGLDVFE 259
++ C L ++T +IN+ V+ ALG +G ++N+ RG +DE E+V L EG +GGAGLDVFE
Sbjct: 225 IICCELNEKTLRLINKDVLSALGKRGVIVNVARGAIIDEEEMVRCLREGEIGGAGLDVFE 284
Query: 260 NEPHVPEELFGLENVVLVPHAGPATVETRFAMAELVLGNLEAHFLGKPLLTPLV 313
+EP+VP+ELF L+NVV PH+ T+E + ++V+GN+EA F KPLLTP++
Sbjct: 285 DEPNVPKELFELDNVVFSPHSAFMTLEGLEELGKVVVGNIEAFFSNKPLLTPVL 338
>AT1G68010.1 | Symbols: HPR, ATHPR1 | hydroxypyruvate reductase |
chr1:25493418-25495720 FORWARD LENGTH=386
Length = 386
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 128/259 (49%), Gaps = 22/259 (8%)
Query: 72 SNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQW 131
SN VG + +D+ + G+ V TP VLT+ A+LA L L RRI E D ++R G +
Sbjct: 91 SNMAVGYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRGGLY 150
Query: 132 KKGDYKLTTK--FSGKTVGIVGLGRIGVAIAKR-AEGFNCPICYY-----SRTEKPESKY 183
+ L G+TVG++G GRIG A A+ EGF + Y+ +R EK + Y
Sbjct: 151 EGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAY 210
Query: 184 --------------KYYPSVVELASNCDILVVACSLTQETHHIINRKVIDALGSKGFLIN 229
K S+ E+ D++ + L + T+H++N++ + + + L+N
Sbjct: 211 GQFLKANGEQPVTWKRASSMEEVLREADLISLHPVLDKTTYHLVNKERLAMMKKEAILVN 270
Query: 230 IGRGTHVDEAELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLVPHAGPATVETRF 289
RG +DEA LV L E + GLDVFE EP + L +N ++VPH A+ TR
Sbjct: 271 CSRGPVIDEAALVEHLKENPMFRVGLDVFEEEPFMKPGLADTKNAIVVPHIASASKWTRE 330
Query: 290 AMAELVLGNLEAHFLGKPL 308
MA L N+ G P+
Sbjct: 331 GMATLAALNVLGRVKGYPI 349
>AT4G34200.1 | Symbols: EDA9 | D-3-phosphoglycerate dehydrogenase |
chr4:16374041-16376561 REVERSE LENGTH=603
Length = 603
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 71 VSNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQ 130
V GVG+D +DL+ E G V P T A+ I L+ + R + + D V++G+
Sbjct: 128 VGRAGVGIDNVDLSAATEFGCLVVNAPTANTIAAAEHGIALMAAMARNVAQADASVKAGE 187
Query: 131 WKKGDYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICY---YSRTEKPESKYKYYP 187
WK+ Y + GKT+ ++G G++G +A+RA+G + Y+ ++ +
Sbjct: 188 WKRNKY-VGVSLVGKTLAVLGFGKVGTEVARRAKGLGMRVIAHDPYAPADRAHAIGVDLV 246
Query: 188 SVVELASNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAELVSALVE 247
S E + D + + LT T I+N + + ++N+ RG +DE LV AL
Sbjct: 247 SFDEALATADFISLHMPLTPTTSKILNDETFAKMKKGVRIVNVARGGVIDEDALVRALDA 306
Query: 248 GRLGGAGLDVFENEPHVPE-ELFGLENVVLVPHAGPATVETR----FAMAELVLGNLEAH 302
G + A LDVF EP + +L E V + PH G +T+E + +AE V+G L
Sbjct: 307 GIVAQAALDVFTKEPPAKDSKLVQHERVTVTPHLGASTMEAQEGVAIEIAEAVVGALNGE 366
Query: 303 FLGKPLLTPLV 313
+ P+V
Sbjct: 367 LAATAVNAPMV 377
>AT1G17745.1 | Symbols: PGDH | D-3-phosphoglycerate dehydrogenase |
chr1:6101157-6104979 FORWARD LENGTH=624
Length = 624
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 9/251 (3%)
Query: 71 VSNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQ 130
V GVG+D +DL E G V P T A+ I L+ ++ R + + D +++G+
Sbjct: 149 VGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGK 208
Query: 131 WKKGDYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICY---YSRTEKPESKYKYYP 187
W++ Y + GKT+ ++G G++G +A+RA+G + Y+ ++ +
Sbjct: 209 WERSKY-VGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVISHDPYAPADRARALGVDLV 267
Query: 188 SVVELASNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAELVSALVE 247
S + S D + + LT T + N + + LIN+ RG +DE LV AL
Sbjct: 268 SFDQAISTADFVSLHMPLTPATKKVFNDETFSKMKKGVRLINVARGGVIDEDALVRALDA 327
Query: 248 GRLGGAGLDVF-ENEPHVPEELFGLENVVLVPHAGPATVETR----FAMAELVLGNLEAH 302
G + A LDVF E P L ENV + PH G +T E + +AE V G L+
Sbjct: 328 GIVAQAALDVFCEEPPSKDSRLIQHENVTVTPHLGASTKEAQEGVAIEIAEAVAGALKGE 387
Query: 303 FLGKPLLTPLV 313
+ P+V
Sbjct: 388 LSATAVNAPMV 398
>AT1G68010.2 | Symbols: HPR | hydroxypyruvate reductase |
chr1:25493418-25495720 FORWARD LENGTH=387
Length = 387
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 23/260 (8%)
Query: 72 SNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQW 131
SN VG + +D+ + G+ V TP VLT+ A+LA L L RRI E D ++R G +
Sbjct: 91 SNMAVGYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRGGLY 150
Query: 132 KKGDYKLTTK--FSGKTVGIVGLGRIGVAIAKR-AEGFNCPICYY-----SRTEKPESKY 183
+ L G+TVG++G GRIG A A+ EGF + Y+ +R EK + Y
Sbjct: 151 EGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAY 210
Query: 184 --------------KYYPSVVELASNCDILVVACSLTQETHHIINRKVIDALGS-KGFLI 228
K S+ E+ D++ + L + T+H++N++ + + + L+
Sbjct: 211 GQFLKANGEQPVTWKRASSMEEVLREADLISLHPVLDKTTYHLVNKERLAMMKKVEAILV 270
Query: 229 NIGRGTHVDEAELVSALVEGRLGGAGLDVFENEPHVPEELFGLENVVLVPHAGPATVETR 288
N RG +DEA LV L E + GLDVFE EP + L +N ++VPH A+ TR
Sbjct: 271 NCSRGPVIDEAALVEHLKENPMFRVGLDVFEEEPFMKPGLADTKNAIVVPHIASASKWTR 330
Query: 289 FAMAELVLGNLEAHFLGKPL 308
MA L N+ G P+
Sbjct: 331 EGMATLAALNVLGRVKGYPI 350
>AT3G19480.1 | Symbols: | D-3-phosphoglycerate dehydrogenase |
chr3:6752590-6754650 FORWARD LENGTH=588
Length = 588
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 119/252 (47%), Gaps = 11/252 (4%)
Query: 71 VSNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQ 130
V GVG+D +DL E G V P T A+ I L+ + R I + D +++G+
Sbjct: 113 VGRAGVGIDNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADASIKAGK 172
Query: 131 WKKGDYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICY---YSRTEKPESKYKYYP 187
W + Y + GKT+ ++G G++G +A+RA G + Y+ ++ +
Sbjct: 173 WTRNKY-VGVSLVGKTLAVLGFGKVGSEVARRARGLGMHVITHDPYAPADRARAIGVELV 231
Query: 188 SVVELASNCDILVVACSLTQETHHIINRKVIDALGSKGF-LINIGRGTHVDEAELVSALV 246
S S D + + LT T ++N V A+ KG ++N+ RG +DE L+ AL
Sbjct: 232 SFEVAISTADFISLHLPLTAATSKMMN-DVTFAMMKKGVRIVNVARGGVIDEEALLRALD 290
Query: 247 EGRLGGAGLDVFENEPHVPEELFGL-ENVVLVPHAGPATVETR----FAMAELVLGNLEA 301
G + A LDVF EP V + L E+V PH G +T+E + +AE V+G L
Sbjct: 291 SGIVAQAALDVFTVEPPVKDNKLVLHESVTATPHLGASTMEAQEGVSIEVAEAVIGALRG 350
Query: 302 HFLGKPLLTPLV 313
+ P+V
Sbjct: 351 ELAATAVNAPMV 362
>AT1G72190.1 | Symbols: | D-isomer specific 2-hydroxyacid
dehydrogenase family protein | chr1:27167458-27169696
REVERSE LENGTH=373
Length = 373
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 20/240 (8%)
Query: 71 VSNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVA---DLAIGLILTLLRRICECDGYVR 127
+ YGVG+D +D++ + G++V P T + A ++AI L+L LL++ E +R
Sbjct: 119 IMQYGVGLDGVDIDAATKHGIKVARIPSEGTGNAASCSEMAIYLMLGLLKKQNEMQISLR 178
Query: 128 SGQWKK--GDYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNC---------PICYYSRT 176
+ + GD L GKTV I+G G IG+ +AKR + F P
Sbjct: 179 NRLLGEPTGDTLL-----GKTVFILGYGNIGIELAKRLKPFGSRVIATKRFWPASIVDSD 233
Query: 177 EKPESKYKYYPSVVELASNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHV 236
+ + + + A DI+VV L +ET I+N++ I ++ L+NI RG +
Sbjct: 234 SRLVDEKGSHEDIYTFAGKADIVVVCLRLNKETAEIVNKEFICSMKKGALLVNIARGGLI 293
Query: 237 DEAELVSALVEGRLGGAGLDVFENEPHVPEE-LFGLENVVLVPHAGPATVETRFAMAELV 295
+ L G LGG G+DV +EP P + + +NV++ PH T + +MA++V
Sbjct: 294 NYESAFQNLESGHLGGLGIDVAWSEPFDPNDPILKFKNVIITPHVAGVTEYSYRSMAKIV 353
>AT5G14780.1 | Symbols: FDH | formate dehydrogenase |
chr5:4777043-4779190 FORWARD LENGTH=384
Length = 384
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 7/243 (2%)
Query: 75 GVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQWK-K 133
G+G D IDL G+ V VA+ + IL L+R V G+W
Sbjct: 127 GIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVA 186
Query: 134 GDYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICYYSRTE-----KPESKYKYYPS 188
G GKT+G VG GRIG + +R + F C + Y+ R + + E+ K+
Sbjct: 187 GIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVED 246
Query: 189 VVELASNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAELVSALVEG 248
+ E+ CD++V+ LT++T + N+++I L ++N RG ++ +V A+ G
Sbjct: 247 LNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESG 306
Query: 249 RLGGAGLDVFENEPHVPEELFG-LENVVLVPHAGPATVETRFAMAELVLGNLEAHFLGKP 307
+GG DV++ +P + + + N + PH T++ + A LE +F G+
Sbjct: 307 HIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGED 366
Query: 308 LLT 310
T
Sbjct: 367 FPT 369
>AT1G17745.2 | Symbols: PGDH | D-3-phosphoglycerate dehydrogenase |
chr1:6101157-6104979 FORWARD LENGTH=651
Length = 651
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 34/277 (12%)
Query: 71 VSNYGVGVDKIDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSG- 129
V GVG+D +DL E G V P T A+ I L+ ++ R + + D +++G
Sbjct: 149 VGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGT 208
Query: 130 ----------QWK----KGDYKLTTK-----------FSGKTVGIVGLGRIGVAIAKRAE 164
+W K Y + T+ GKT+ ++G G++G +A+RA+
Sbjct: 209 LNYLFLVLLLRWNCRQSKHQYTIETETEKRSKYVGVSLVGKTLAVMGFGKVGTEVARRAK 268
Query: 165 GFNCPICY---YSRTEKPESKYKYYPSVVELASNCDILVVACSLTQETHHIINRKVIDAL 221
G + Y+ ++ + S + S D + + LT T + N + +
Sbjct: 269 GLGMTVISHDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATKKVFNDETFSKM 328
Query: 222 GSKGFLINIGRGTHVDEAELVSALVEGRLGGAGLDVF-ENEPHVPEELFGLENVVLVPHA 280
LIN+ RG +DE LV AL G + A LDVF E P L ENV + PH
Sbjct: 329 KKGVRLINVARGGVIDEDALVRALDAGIVAQAALDVFCEEPPSKDSRLIQHENVTVTPHL 388
Query: 281 GPATVETR----FAMAELVLGNLEAHFLGKPLLTPLV 313
G +T E + +AE V G L+ + P+V
Sbjct: 389 GASTKEAQEGVAIEIAEAVAGALKGELSATAVNAPMV 425
>AT5G28310.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:10300117-10301844 REVERSE LENGTH=233
Length = 233
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 79/180 (43%), Gaps = 52/180 (28%)
Query: 135 DYKLTTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICYYSRTEKPES-KYKYYPSVVELA 193
D L S K +GIVGLG IG +A R + F C I Y SR KP + Y YY + E+
Sbjct: 105 DPDLNQYQSKKRIGIVGLGSIGSKVATRLKAFGCQISYSSRNRKPYAVPYHYYMDIEEM- 163
Query: 194 SNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAELVSALVEGRLGGA 253
G ++N+ G +DE E+
Sbjct: 164 ------------------------------HGVIVNVALGAIIDEEEM------------ 181
Query: 254 GLDVFENEPHVPEELFGLENVVLVPHAGPATVETRFAMAELVLGNLEAHFLGKPLLTPLV 313
+VP+ELF L+NVV PH T+E + ++V+GN+EA F KPLLTP++
Sbjct: 182 --------SNVPKELFELDNVVFSPHCAFMTLEGLEELGKVVVGNIEAFFSNKPLLTPVL 233
>AT2G45630.1 | Symbols: | D-isomer specific 2-hydroxyacid
dehydrogenase family protein | chr2:18796000-18796560
FORWARD LENGTH=186
Length = 186
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 23 RYKVFRTWDYPQK-SQLLSHHAASIRAIVCHARAGADXXXXXXXXXXXXVSNYGVGVDKI 81
++++ + ++ P + L++H+ SI AI+ A V GVD +
Sbjct: 45 KFEILKAFESPLPLPEFLAYHSDSISAIIAPVAAPVTADLIRILPNLRLVVTTSAGVDHV 104
Query: 82 DLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQWK-KGDYKLTT 140
DL +CR +G+ V ++DVAD A+GL++ + RRI + +V+ W KGDY L +
Sbjct: 105 DLVECRRRGISVANAGSSFSEDVADTAVGLLIDVFRRISAANRFVKQRFWPLKGDYPLGS 164
Query: 141 K 141
K
Sbjct: 165 K 165
>AT1G01510.1 | Symbols: AN | NAD(P)-binding Rossmann-fold
superfamily protein | chr1:187235-189836 FORWARD
LENGTH=636
Length = 636
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 13/237 (5%)
Query: 81 IDLNKCREKGVRVTYTPDVLTDDVADLAIGLILTLLRRICECDGYVRSGQWKKGDYKL-- 138
+D + G+R+ + +++AD + LIL LLRR + S G +
Sbjct: 96 VDSTLAADLGLRLVHVDTSRAEEIADTVMALILGLLRRTHLLSRHALSASGWLGSLQPLC 155
Query: 139 --TTKFSGKTVGIVGLGRIGVAIAKRAEGFNCPICYYSRTEKPESKYK--YYP------- 187
+ G +GIVG +A R+ F + Y+ E E + + +P
Sbjct: 156 RGMRRCRGMVLGIVGRSVSARYLASRSLAFKMSVLYFDVPEGDEERIRPSRFPRAARRMD 215
Query: 188 SVVELASNCDILVVACSLTQETHHIINRKVIDALGSKGFLINIGRGTHVDEAELVSALVE 247
++ +L + D++ + C+LT +T I+N + + + FL+N G +D+ + L++
Sbjct: 216 TLNDLLAASDVISLHCALTNDTVQILNAECLQHIKPGAFLVNTGSCQLLDDCAVKQLLID 275
Query: 248 GRLGGAGLDVFENEPHVPEELFGLENVVLVPHAGPATVETRFAMAELVLGNLEAHFL 304
G + G LD E + + + NV+++P + + E + E + L + FL
Sbjct: 276 GTIAGCALDGAEGPQWMEAWVKEMPNVLILPRSADYSEEVWMEIREKAISILHSFFL 332