Miyakogusa Predicted Gene

Lj2g3v2002660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002660.1 Non Chatacterized Hit- tr|Q55UY1|Q55UY1_CRYNB
Putative uncharacterized protein OS=Cryptococcus
neofo,37.12,1e-17,seg,NULL; Cornichon,Cornichon;
CORNICHON-RELATED,NULL,CUFF.38376.1
         (137 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12390.1 | Symbols:  | Cornichon family protein | chr1:422034...   174   1e-44
AT1G12340.1 | Symbols:  | Cornichon family protein | chr1:419739...   171   2e-43
AT1G62880.1 | Symbols:  | Cornichon family protein | chr1:232921...   168   1e-42
AT4G12090.1 | Symbols:  | Cornichon family protein | chr4:724216...   141   1e-34
AT3G12180.1 | Symbols:  | Cornichon family protein | chr3:388346...   105   1e-23

>AT1G12390.1 | Symbols:  | Cornichon family protein |
           chr1:4220347-4221481 FORWARD LENGTH=137
          Length = 137

 Score =  174 bits (441), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 78/117 (66%), Positives = 101/117 (86%)

Query: 21  VTYQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLC 80
           + YQL+CLADLEFDYINPYD +S+IN+VVLPE+I+QG L  FYL+TGHW M+L C+PYL 
Sbjct: 21  IVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLY 80

Query: 81  YNVRMYIQRKHLVDVTEIFNQLSWEKKQRLVKLFYIVITLFLSVIWMIYTSMDDHDD 137
           YN  +Y +R+HLVDVTEIFN L+WEKK+RL KL YIV+ LFL++ WMIY+++DD++D
Sbjct: 81  YNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYED 137


>AT1G12340.1 | Symbols:  | Cornichon family protein |
           chr1:4197396-4198032 FORWARD LENGTH=129
          Length = 129

 Score =  171 bits (432), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 76/115 (66%), Positives = 99/115 (86%)

Query: 23  YQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLCYN 82
           + L+CLADLEFDYINPYD +S+IN+VVLPE+I+QG L  FYL+TGHW M+L C+PYL YN
Sbjct: 15  FHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYN 74

Query: 83  VRMYIQRKHLVDVTEIFNQLSWEKKQRLVKLFYIVITLFLSVIWMIYTSMDDHDD 137
             +Y +R+HLVDVTEIFN L+WEKK+RL KL YIV+ LFL++ WMIY+++DD++D
Sbjct: 75  FHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYED 129


>AT1G62880.1 | Symbols:  | Cornichon family protein |
           chr1:23292125-23293307 FORWARD LENGTH=137
          Length = 137

 Score =  168 bits (426), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 76/115 (66%), Positives = 98/115 (85%)

Query: 23  YQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLCYN 82
           YQL+ LADLEFDYINPYD +S+IN VVLPE I+QGFL  FYL+TGHW M+L CVPYL YN
Sbjct: 23  YQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYN 82

Query: 83  VRMYIQRKHLVDVTEIFNQLSWEKKQRLVKLFYIVITLFLSVIWMIYTSMDDHDD 137
             +Y +++HL+DVTEIFN L WEKK+RL KL YI++TLFL++ W+IY+++DD++D
Sbjct: 83  FHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLIYSTLDDYED 137


>AT4G12090.1 | Symbols:  | Cornichon family protein |
           chr4:7242165-7242924 REVERSE LENGTH=135
          Length = 135

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 58/114 (50%), Positives = 91/114 (79%)

Query: 21  VTYQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLC 80
           V YQL CLADLEFD INPYD SS+IN +VLPE+ +QG L  +Y++TGHW M++  +P+L 
Sbjct: 21  VIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLF 80

Query: 81  YNVRMYIQRKHLVDVTEIFNQLSWEKKQRLVKLFYIVITLFLSVIWMIYTSMDD 134
           YN+R+Y++R+HL DVTE++N   WE+K+R+ K+ +I +++F++  W+I++++ D
Sbjct: 81  YNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFITTYWLIHSALGD 134


>AT3G12180.1 | Symbols:  | Cornichon family protein |
           chr3:3883464-3884570 FORWARD LENGTH=146
          Length = 146

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 80/120 (66%), Gaps = 4/120 (3%)

Query: 21  VTYQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLC 80
           V YQ++CL DLE DY+NP++ S++IN +V+PE+I+QG L   +L+T HWV  L  VP   
Sbjct: 22  VFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTV 81

Query: 81  YNVRMYIQRKHLVDVTEIFNQLSWEKKQRLVKL----FYIVITLFLSVIWMIYTSMDDHD 136
           Y+  +Y +R++L+DVTE+F  +S+EKK R  KL    F  ++ +F   +  +Y+  +D D
Sbjct: 82  YHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSAVYSFTEDDD 141