Miyakogusa Predicted Gene

Lj2g3v2002440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002440.1 Non Chatacterized Hit- tr|I3S0V1|I3S0V1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,48.46,1e-17,no
description,Plant lipid transfer protein/hydrophobic protein helical
domain; LIPIDTRNSFER,Plant l,CUFF.38364.1
         (136 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G70250.1 | Symbols:  | receptor serine/threonine kinase, puta...    58   2e-09
AT1G62790.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    55   1e-08
AT1G62790.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    55   2e-08

>AT1G70250.1 | Symbols:  | receptor serine/threonine kinase,
           putative | chr1:26452975-26456088 FORWARD LENGTH=799
          Length = 799

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)

Query: 12  VMGWALMVVIAEAQDLPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEKSCFCELAL 71
           +M +A++V + E +    C +++ PC  +LN+T+                + SC C +  
Sbjct: 5   MMIFAVLVTVVEVEAQTECVSKIVPCFRFLNTTTKPSTDCCNSIKEAMEKDFSCLCTIYN 64

Query: 72  SPSILQGFGINTAQALQLVQLCGVNFDLTSCEAS 105
           +P +L  F I T QAL L   CGVN DL++C  S
Sbjct: 65  TPGLLAQFNITTDQALGLNLRCGVNTDLSACSGS 98


>AT1G62790.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr1:23252369-23253481 FORWARD LENGTH=149
          Length = 149

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 6/114 (5%)

Query: 17  LMVVIAEAQDLPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEKSCFCELALSPSIL 76
           L+V   EAQ    C ++L PC   LN+T+                E +C C +  SP +L
Sbjct: 18  LLVPTIEAQT--ECVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTSPGLL 75

Query: 77  QGFGINTAQALQLVQLCGVNFDLTSCEASSPVGLP-PSSVQPPATPGGDEGGAG 129
             F + T +AL L + C V  DL++C A    G P P +  PP  PG  +  AG
Sbjct: 76  AQFNVTTEKALGLSRRCNVTTDLSACTAK---GAPSPKASLPPPAPGNTKKDAG 126


>AT1G62790.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr1:23252369-23253481 FORWARD LENGTH=150
          Length = 150

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 3/113 (2%)

Query: 17  LMVVIAEAQDLPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEKSCFCELALSPSIL 76
           L+V   EAQ    C ++L PC   LN+T+                E +C C +  SP +L
Sbjct: 18  LLVPTIEAQT--ECVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTSPGLL 75

Query: 77  QGFGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPPATPGGDEGGAG 129
             F + T +AL L + C V  DL++C A      P +S+ PPA  G  +  AG
Sbjct: 76  AQFNVTTEKALGLSRRCNVTTDLSACTAKGAPS-PKASLPPPAPAGNTKKDAG 127