Miyakogusa Predicted Gene
- Lj2g3v2002420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2002420.1 tr|Q9LDN3|Q9LDN3_ARATH Gb|AAF34841.1
OS=Arabidopsis thaliana GN=At3g15320 PE=4
SV=1,35.71,1e-18,coiled-coil,NULL; seg,NULL;
NAM-associated,NULL,CUFF.38353.1
(458 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41240.1 | Symbols: ATGSTT2, GST10B, GSTT2 | glutathione S-tr... 111 1e-24
AT3G47680.1 | Symbols: | DNA binding | chr3:17577483-17578391 R... 102 8e-22
AT5G41220.1 | Symbols: ATGSTT3, GST10C, GSTT3 | glutathione S-tr... 97 3e-20
>AT5G41240.1 | Symbols: ATGSTT2, GST10B, GSTT2 | glutathione
S-transferase THETA 2 | chr5:16498293-16500811 REVERSE
LENGTH=591
Length = 591
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 110/198 (55%), Gaps = 16/198 (8%)
Query: 183 DLEESGNKRTKWSGKDNILLLQSWLNVSTDR--VVGNEQKSDLFWNKIRAQYEEYRDDAS 240
D + +R KWS D+++L+ +WLN S DR VV +EQ++ FW +I A A+
Sbjct: 262 DTTDRKARRRKWSPPDDVILISAWLNTSKDRKVVVYDEQQAHTFWKRIGAHVSNSASLAN 321
Query: 241 -PSRTWLSLKSHFNKLNANLQKFVGCHTKAVNHWKSGHSDKDIMATAHQLYHVDTGKDFK 299
P R W + + K+N + KFVGC+ +A+N SG S+ D+ A+QLY+ + +FK
Sbjct: 322 LPKREWNHCRQRWRKINDYVCKFVGCYDQALNQRASGQSEDDVFQVAYQLYYNNYMSNFK 381
Query: 300 HENEWRLVKDEPKWKGTFMTT------SSTRQKKSVDGVYATSSDRSA---SIEGDEYEA 350
E+ WR ++ KW T+ + SS R K + GVY++S + + +++G+E
Sbjct: 382 LEHAWRELRHNKKWCSTYTSENSKGGGSSKRTKLNGGGVYSSSCNPESVPIALDGEE--- 438
Query: 351 TQPATRPLGKKNQKRKAK 368
Q RPLG K+ K+K K
Sbjct: 439 -QVMDRPLGVKSSKQKEK 455
>AT3G47680.1 | Symbols: | DNA binding | chr3:17577483-17578391
REVERSE LENGTH=302
Length = 302
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 19/175 (10%)
Query: 191 RTKWSGKDNILLLQSWLNVSTDRVVGNEQKSDLFWNKIRAQYEEYRDDASP------SRT 244
R KWS ++++L+ +WLN S D V+GNEQK FW++I A Y ASP R
Sbjct: 47 RRKWSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYY-----GASPKLNGVEKRE 101
Query: 245 WLSLKSHFNKLNANLQKFVGCHTKAVNHWKSGHSDKDIMATAHQLYHVDTGKDFKHENEW 304
+K + K+N + KFVG + A SG +D D++A AH++Y+ + GK F E+ W
Sbjct: 102 TGHIKQRWTKINEGVGKFVGSYEAATKQKSSGQNDDDVVALAHEIYNSEHGK-FTLEHAW 160
Query: 305 RLVKDEPKWKGTFMTTSSTRQKKSVDGVYATSSDRSASIEGDEYEATQPATRPLG 359
R+++ E KW T ++ K+ SD++++ + +EA + +RP+G
Sbjct: 161 RVLRFEQKWLSAPSTKATVMSKRR-------KSDKASTSQPQTHEAEEAMSRPIG 208
>AT5G41220.1 | Symbols: ATGSTT3, GST10C, GSTT3 | glutathione
S-transferase THETA 3 | chr5:16494560-16496969 REVERSE
LENGTH=590
Length = 590
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 99/187 (52%), Gaps = 11/187 (5%)
Query: 191 RTKWSGKDNILLLQSWLNVSTDRVVGNEQKSDLFWNKIRAQYEEYRDDAS-PSRTWLSLK 249
R KWS ++ +L+ +WLN S D +V NE K+ FW +I A + A+ P R K
Sbjct: 270 RRKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCK 329
Query: 250 SHFNKLNANLQKFVGCHTKAVNHWKSGHSDKDIMATAHQLYHVDTGKDFKHENEWRLVKD 309
++KLN + KFVGC+ +A+N SG S+ D+ A+Q+Y + +F E+ WR ++
Sbjct: 330 QRWSKLNDKVCKFVGCYDQALNQRSSGQSEDDVFQVAYQVYTNNYKSNFTLEHAWRELRH 389
Query: 310 EPKWKGTF------MTTSSTRQK-KSVDGVYATSSD-RSASIEGDEYEATQPATRPLGKK 361
KW + SS R K + D VY++SS+ S I DE E Q PLG K
Sbjct: 390 SKKWCSLYPFENSKGGGSSKRTKLNNGDRVYSSSSNPESVPIALDEEE--QVMDLPLGVK 447
Query: 362 NQKRKAK 368
+ K+K K
Sbjct: 448 SSKQKEK 454