Miyakogusa Predicted Gene

Lj2g3v2001600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2001600.1 tr|G7JW40|G7JW40_MEDTR Matrix
metalloproteinase-28 OS=Medicago truncatula GN=MTR_5g012680 PE=4
SV=1,75.42,0,Metalloproteases ("zincins"), catalytic domain,NULL;
PGBD-like,Peptidoglycan binding-like; seg,NULL;,CUFF.38325.1
         (362 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16640.1 | Symbols:  | Matrixin family protein | chr4:9367396...   354   6e-98
AT2G45040.1 | Symbols:  | Matrixin family protein | chr2:1857769...   332   2e-91
AT1G70170.1 | Symbols: MMP | matrix metalloproteinase | chr1:264...   283   2e-76
AT1G24140.1 | Symbols:  | Matrixin family protein | chr1:8536131...   270   1e-72
AT1G59970.1 | Symbols:  | Matrixin family protein | chr1:2207360...   265   4e-71

>AT4G16640.1 | Symbols:  | Matrixin family protein |
           chr4:9367396-9368490 REVERSE LENGTH=364
          Length = 364

 Score =  354 bits (908), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 181/324 (55%), Positives = 224/324 (69%), Gaps = 18/324 (5%)

Query: 27  CFPTRI----IPESVTVITTQTR-----NATWHDFSRFLHAERGSHVTGMAELKSYFHRF 77
           CFP R      PE+       T+     N+TWHDFSR +  + GSHV+G++ELK Y HRF
Sbjct: 21  CFPYRFGARNTPEAEQSTAKATQIIHVSNSTWHDFSRLVDVQIGSHVSGVSELKRYLHRF 80

Query: 78  GYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISAIVAPRCGVSDXXXX 137
           GY+   +    F+D FD  LESA+  YQ+ L LPITG+LD  T++ +  PRCGVSD    
Sbjct: 81  GYVN--DGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTSTVTLMSLPRCGVSDTHMT 138

Query: 138 HG---LHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVFERAFARWAS 194
                LHTT HY YF+GKP+W R T   LTYA S  + ++ L+ ++++TVF RAF++W+S
Sbjct: 139 INNDFLHTTAHYTYFNGKPKWNRDT---LTYAISKTHKLDYLTSEDVKTVFRRAFSQWSS 195

Query: 195 VIPVSFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPNGRFHLDAAEAWSV 254
           VIPVSF+EV+ F +AD++IGFY+GDHGDG PFDGVLG L HAF+P NGR HLDAAE W V
Sbjct: 196 VIPVSFEEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIV 255

Query: 255 DFD-HDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRGKKVDLRIDDVEGVQ 313
           D D    S+VAVDLESVATHEIGH+LGLGHSS + AVMYPSL PR KKVDL +DDV GV 
Sbjct: 256 DDDLKGSSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVL 315

Query: 314 ALYGSNPNFSFSSFLQSENSYNHA 337
            LYG NP     S  QSE+S  + 
Sbjct: 316 KLYGPNPKLRLDSLTQSEDSIKNG 339


>AT2G45040.1 | Symbols:  | Matrixin family protein |
           chr2:18577693-18578721 FORWARD LENGTH=342
          Length = 342

 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 165/275 (60%), Positives = 195/275 (70%), Gaps = 8/275 (2%)

Query: 67  MAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISAIVA 126
           + E+K +  ++GYL     P N  ++ D   E AL+ YQK L LPITGK D DT+S I+ 
Sbjct: 50  IPEIKRHLQQYGYL-----PQN-KESDDVSFEQALVRYQKNLGLPITGKPDSDTLSQILL 103

Query: 127 PRCGVSDXXXXHG--LHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTV 184
           PRCG  D         HT   Y YF G+PRW R  P+ LTYAFS  N+   L+  +IR V
Sbjct: 104 PRCGFPDDVEPKTAPFHTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRV 163

Query: 185 FERAFARWASVIPVSFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPNGRF 244
           F RAF +WASVIPVSF E E +  ADI+IGF++GDHGDGEPFDGVLGVL H FSP NGR 
Sbjct: 164 FRRAFGKWASVIPVSFIETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRL 223

Query: 245 HLDAAEAWSVDFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRGKKVDL 304
           HLD AE W+VDFD +KS VAVDLESVA HEIGHVLGLGHSSVK+A MYP+L PR KKV+L
Sbjct: 224 HLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNL 283

Query: 305 RIDDVEGVQALYGSNPNFSFSSFLQSENSYNHAVG 339
            +DDV GVQ+LYG+NPNF+ +S L SE S N A G
Sbjct: 284 NMDDVVGVQSLYGTNPNFTLNSLLASETSTNLADG 318


>AT1G70170.1 | Symbols: MMP | matrix metalloproteinase |
           chr1:26424005-26425141 FORWARD LENGTH=378
          Length = 378

 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/311 (50%), Positives = 193/311 (62%), Gaps = 32/311 (10%)

Query: 38  TVITTQTRNAT---WHDFSRFLHAERGSHVTGMAELKSYFHRFGYLTLPETPS-NFTDTF 93
           T +    RN T   W  FS F     G +V G+  +K YF RFGY+  PET S NFTD F
Sbjct: 27  TAVPPSLRNTTRVFWDAFSNFTGCHHGQNVDGLYRIKKYFQRFGYI--PETFSGNFTDDF 84

Query: 94  DTQLESALLSYQKRLSLPITGKLDKDTISAIVAPRCG----VSDXXXXHG---------- 139
           D  L++A+  YQ   +L +TG+LD  TI  IV PRCG    V+     HG          
Sbjct: 85  DDILKAAVELYQTNFNLNVTGELDALTIQHIVIPRCGNPDVVNGTSLMHGGRRKTFEVNF 144

Query: 140 ----LHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVFERAFARWASV 195
               LH    Y  F G+PRW R     LTYAF P N +     +E+++VF RAF RW+ V
Sbjct: 145 SRTHLHAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPL----TEEVKSVFSRAFGRWSDV 199

Query: 196 IPVSFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPNGRFHLDAAEAWSVD 255
             ++F   E F ++DI IGFY+GDHGDGEPFDGVLG L HAFSPP+G+FHLDA E W V 
Sbjct: 200 TALNFTLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVS 259

Query: 256 FDHD---KSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRGKKVDLRIDDVEGV 312
            D D       AVDLESVA HEIGH+LGLGHSSV+E++MYP+++   +KVDL  DDVEG+
Sbjct: 260 GDLDSFLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGI 319

Query: 313 QALYGSNPNFS 323
           Q LYG+NPNF+
Sbjct: 320 QYLYGANPNFN 330


>AT1G24140.1 | Symbols:  | Matrixin family protein |
           chr1:8536131-8537285 REVERSE LENGTH=384
          Length = 384

 Score =  270 bits (690), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 145/307 (47%), Positives = 182/307 (59%), Gaps = 31/307 (10%)

Query: 45  RNAT---WHDFSRFLHAERGSHVTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESAL 101
           RNAT   W+ F  F     G    G+  LK YF  FGY+T      NFTD FD  L++A+
Sbjct: 36  RNATGNPWNSFLNFTGCHAGKKYDGLYMLKQYFQHFGYITETNLSGNFTDDFDDILKNAV 95

Query: 102 LSYQKRLSLPITGKLDKDTISAIVAPRCG-------------------VSDXXXXHGLHT 142
             YQ+   L +TG LD+ T+  +V PRCG                   VS        H 
Sbjct: 96  EMYQRNFQLNVTGVLDELTLKHVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQRFHA 155

Query: 143 TGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVFERAFARWASVIPVSFQE 202
             HY++F G+PRW R     LTYAF P N +     +E+++VF RAF RW  V P++F  
Sbjct: 156 VKHYSFFPGEPRWPRNR-RDLTYAFDPRNAL----TEEVKSVFSRAFTRWEEVTPLTFTR 210

Query: 203 VEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPNGRFHLDAAEAWSVDFDHDKSK 262
           VE+F ++DI IGFYSG+HGDGEPFDG +  L HAFSPP G FHLD  E W V  +     
Sbjct: 211 VERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGF 270

Query: 263 V----AVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRGKKVDLRIDDVEGVQALYGS 318
           +    AVDLESVA HEIGH+LGLGHSSV+ ++MYP++    +KVDL  DDVEGVQ LYG+
Sbjct: 271 ISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGA 330

Query: 319 NPNFSFS 325
           NPNF+ S
Sbjct: 331 NPNFNGS 337


>AT1G59970.1 | Symbols:  | Matrixin family protein |
           chr1:22073601-22074683 FORWARD LENGTH=360
          Length = 360

 Score =  265 bits (677), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 138/285 (48%), Positives = 179/285 (62%), Gaps = 21/285 (7%)

Query: 44  TRNATWHDFSRFLHAERGSHVTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLS 103
           T+NA W  FS+      G ++ G+++LK YF RFGY+T   T  N TD FD  L+SA+ +
Sbjct: 38  TQNA-WETFSKLAGCHIGENINGLSKLKQYFRRFGYIT---TTGNCTDDFDDVLQSAINT 93

Query: 104 YQKRLSLPITGKLDKDTISAIVAPRCG-------VSDXXXXHGLHTTGHYAYFDGKPRWL 156
           YQK  +L +TGKLD  T+  IV PRCG       VS+      L TT  Y++F GKPRW 
Sbjct: 94  YQKNFNLKVTGKLDSSTLRQIVKPRCGNPDLIDGVSEMNGGKILRTTEKYSFFPGKPRWP 153

Query: 157 RGTPMTLTYAFSPYNMINRLSVKEIRTVFERAFARWASVIPVSFQEVEKFESADIRIGFY 216
           +     LTYAF+P N +      E++ VF RAF RWA V P++F   E    ADI IGF+
Sbjct: 154 K-RKRDLTYAFAPQNNL----TDEVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGFF 208

Query: 217 SGDHGDGEPFDGVLGVLGHAFSPPNGRFHLDAAEAWSVDFDHDKSKV-----AVDLESVA 271
           SG+HGDGEPFDG +G L HA SPP G  HLD  E W +       ++      VDLESVA
Sbjct: 209 SGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESVA 268

Query: 272 THEIGHVLGLGHSSVKEAVMYPSLSPRGKKVDLRIDDVEGVQALY 316
            HEIGH+LGLGHSSV++A+M+P++S   +KV+L  DD+EG+Q LY
Sbjct: 269 VHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313