Miyakogusa Predicted Gene

Lj2g3v2001390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2001390.1 Non Chatacterized Hit- tr|C6TIQ9|C6TIQ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30008
PE,82.69,0,PS_decarb: phosphatidylserine
decarboxylase,Phosphatidylserine decarboxylase;
PS_Dcarbxylase,Phospha,CUFF.38319.1
         (437 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16700.1 | Symbols: PSD1 | phosphatidylserine decarboxylase 1...   571   e-163
AT4G25970.1 | Symbols: PSD3 | phosphatidylserine decarboxylase 3...    78   1e-14
AT5G57190.1 | Symbols: PSD2 | phosphatidylserine decarboxylase 2...    67   2e-11

>AT4G16700.1 | Symbols: PSD1 | phosphatidylserine decarboxylase 1 |
           chr4:9395815-9398261 REVERSE LENGTH=453
          Length = 453

 Score =  571 bits (1472), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/388 (70%), Positives = 320/388 (82%), Gaps = 2/388 (0%)

Query: 47  NSQGDSFLLPGATVATILMLGVLHARRLYDDKKTEEMREKGIELEFQPDAKAAFFRLLPL 106
           +S+G++FL+PGAT+ATILMLG LHARRLY+DKK EE REKGIELEF PD KA+F  +LPL
Sbjct: 65  DSKGNAFLVPGATMATILMLGALHARRLYEDKKIEEKREKGIELEFHPDIKASFLGVLPL 124

Query: 107 RSISRCWGCLTNVEIPVWLRPHVYKAWARAFHSNLEEAALPLDKYASLRDFFVRALKEGS 166
           RSISR WG   ++EIPVW+RP+ YKAWARAFHSNLEEAALPL++Y SL+DFFVR+LKEG 
Sbjct: 125 RSISRAWGSFMSLEIPVWMRPYAYKAWARAFHSNLEEAALPLEEYTSLQDFFVRSLKEGC 184

Query: 167 RPIDADPQCLVSPVDGTVLRFGELRGAGAMIEQVKGFSYSVFSLLGASPSLPTTADDNMQ 226
           RPID DP CLVSPVDGTVLRFGEL+G   MIEQVKG SYSV +LLG +  LP   +   +
Sbjct: 185 RPIDPDPCCLVSPVDGTVLRFGELKGNRGMIEQVKGHSYSVPALLGNNSLLPMEPEG--K 242

Query: 227 EEHRESIKTEKGKKSWWSVSLASPKVWDPRSSCPKRGLFYCVIYLKPGDYHRMHSPADWS 286
            E +E    +K  KSW  VSLASPK+ +  S+ P +GL+YCVIYLKPGDYHR+HSPADW+
Sbjct: 243 NESKEEAVGDKSDKSWLRVSLASPKLRENVSASPMKGLYYCVIYLKPGDYHRIHSPADWN 302

Query: 287 ILVRRHFAGRLYPVNERATRTIRNLYTENERVILEGLWQEGFMALAAIGATNIGSIELFI 346
             VRRHFAGRL+PVNERATRTIRNLY ENERV+LEG+W+EGFMALAA+GATNIGSIELFI
Sbjct: 303 ATVRRHFAGRLFPVNERATRTIRNLYVENERVVLEGIWKEGFMALAAVGATNIGSIELFI 362

Query: 347 EPELQTNKPKKKLLHSERPEERVYDCDGVGRILKKGNEVGAFNMGSTVVLVFQAPISKLN 406
           EPEL+TNKPKKKL  +E PEERVYD +G+G  L+KG EV  FNMGSTVVL+FQAP +   
Sbjct: 363 EPELRTNKPKKKLFPTEPPEERVYDPEGLGLRLEKGKEVAVFNMGSTVVLIFQAPTANTP 422

Query: 407 HEGDSSQDFNFCVKHGDRIRVGEALGRW 434
               SS D+ FCVK GDR+RVG+ALGRW
Sbjct: 423 EGSSSSSDYRFCVKQGDRVRVGQALGRW 450


>AT4G25970.1 | Symbols: PSD3 | phosphatidylserine decarboxylase 3 |
           chr4:13184240-13189139 FORWARD LENGTH=635
          Length = 635

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 75/274 (27%)

Query: 140 NLEEAALPLDKYASLRDFFVRALKEGSRPIDADPQ--CLVSPVDGTVLRFGELRGAGAMI 197
           N+ E   PLD + +  +FFVR LK G+RPI    Q    VS  D  ++ F  +  +    
Sbjct: 399 NMAEVKYPLDHFKTFNEFFVRELKPGARPIACMDQDDVAVSAADCRLMAFQSVDDSTRF- 457

Query: 198 EQVKGFSYSVFSLLGASPSLPTTADDNMQEEHRESIKTEKGKKSWWSVSLASPKVWDPRS 257
             +KG  +S+  LLG         D ++                                
Sbjct: 458 -WIKGRKFSIKGLLGNDVQSDAFLDGSL-------------------------------- 484

Query: 258 SCPKRGLFYCVIYLKPGDYHRMHSPADWSILVRRHFAGRLYPVNERATRT-IRNLYTENE 316
                     +  L P DYHR HSP    I    + +G LY VN  A  +   N++TEN+
Sbjct: 485 ---------VIFRLAPQDYHRFHSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENK 535

Query: 317 R-VILEGLWQEGFMALAAIGATNIGSIELFIEPELQTNKPKKKLLHSERPEERVYDCDGV 375
           R +++    + G +A  AIGAT +GSI  F+  E                          
Sbjct: 536 RTIVIISTAEFGKVAFVAIGATMVGSIS-FVRQE-------------------------- 568

Query: 376 GRILKKGNEVGAFNM-GSTVVLVFQAPISKLNHE 408
           G  +KKG+E+G F+  GSTV+ VF+    K++ +
Sbjct: 569 GDHVKKGDELGYFSFGGSTVICVFEKDSIKIDED 602


>AT5G57190.1 | Symbols: PSD2 | phosphatidylserine decarboxylase 2 |
           chr5:23171531-23175364 REVERSE LENGTH=635
          Length = 635

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 103/265 (38%), Gaps = 75/265 (28%)

Query: 140 NLEEAALPLDKYASLRDFFVRALKEGSRPIDA--DPQCLVSPVDGTVLRFGELRGAGAMI 197
           N+ E   PL  + +  +FF+R LK G+RPI         V   D  ++ F  +  +    
Sbjct: 400 NMAEVKYPLQHFKTFNEFFIRELKPGARPIACMNRNDVAVCAADCRLMAFQSVEDSTRF- 458

Query: 198 EQVKGFSYSVFSLLGASPSLPTTADDNMQEEHRESIKTEKGKKSWWSVSLASPKVWDPRS 257
             +KG  +S+  LLG + +     D ++                                
Sbjct: 459 -WIKGKKFSIRGLLGKNVNPNAFLDGSL-------------------------------- 485

Query: 258 SCPKRGLFYCVIYLKPGDYHRMHSPADWSILVRRHFAGRLYPVNERATRT-IRNLYTENE 316
                     +  L P DYHR H P    I      +G LY VN  A  +   N++TEN+
Sbjct: 486 ---------VIFRLAPQDYHRFHVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENK 536

Query: 317 RVI-LEGLWQEGFMALAAIGATNIGSIELFIEPELQTNKPKKKLLHSERPEERVYDCDGV 375
           R + +    + G +A  AIGAT +GSI  F+  E                          
Sbjct: 537 RTVAIISTAEFGKVAFVAIGATMVGSIN-FVRKE-------------------------- 569

Query: 376 GRILKKGNEVGAFNM-GSTVVLVFQ 399
           G  +KKG+E+G F+  GSTV+ VF+
Sbjct: 570 GEHVKKGDELGYFSFGGSTVICVFE 594