Miyakogusa Predicted Gene

Lj2g3v1988990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1988990.1 tr|I1J9Q7|I1J9Q7_SOYBN Glutamate dehydrogenase
OS=Glycine max GN=Gma.50162 PE=3
SV=1,92.46,0,GLFDHDRGNASE,Glutamate/phenylalanine/leucine/valine
dehydrogenase; NAD(P)-binding Rossmann-fold doma,CUFF.38285.1
         (411 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   758   0.0  
AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   758   0.0  
AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 | chr5:6...   703   0.0  
AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 | chr3:1...   701   0.0  
AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   545   e-155
AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protei...   130   2e-30

>AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2358012 FORWARD LENGTH=411
          Length = 411

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/411 (86%), Positives = 384/411 (93%)

Query: 1   MNALAATNRNFKRAARILGLDAKLENSLMIPFREIKVECTIPKDDGTLVSYVGFRIQHDN 60
           MNALAATNRNF+ A+RILGLD+K+E SLMIPFREIKVECTIPKDDGTLVSY+GFR+QHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPKDLSLSELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGC+P+DLSLSELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGVQRDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG+  DVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVIFATEALFAEYGKSISDMTFAIQGFGNVGSWAARSIFERGGKVVAVSDISG 240
           REAATG GV+FATEAL AEYGKSI  +TF IQGFGNVG+WAA+ I E+GGKVVAVSDI+G
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIKNPNGIDIKALLKHKEGNGTLKDFPGGDAMDPNELLVHECDVLIPCALGGVLNKENAA 300
           AI+NP GIDI AL+KHK+  G+L DF GGDAM+ +ELL+HECDVLIPCALGGVLNKENA 
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAG 300

Query: 301 DVKAKFVIEAANHPTDPDADEILSKKGVVILPDIYANAGGVTVSYFEWVQNIQGFMWDEE 360
           DVKAKF++EAANHPTDPDADEILSKKGV+ILPDIYANAGGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 DVKAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNKELKNYMTRAFRNIKAMCKIHDCDLRMGAFTLGVNRVARATLLRGWEA 411
           KVN EL+ YMTRAF NIK MC  H C+LRMGAFTLGVNRVARAT LRGWEA
Sbjct: 361 KVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLRGWEA 411


>AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2358012 FORWARD LENGTH=411
          Length = 411

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/411 (86%), Positives = 384/411 (93%)

Query: 1   MNALAATNRNFKRAARILGLDAKLENSLMIPFREIKVECTIPKDDGTLVSYVGFRIQHDN 60
           MNALAATNRNF+ A+RILGLD+K+E SLMIPFREIKVECTIPKDDGTLVSY+GFR+QHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPKDLSLSELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGC+P+DLSLSELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGVQRDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG+  DVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVIFATEALFAEYGKSISDMTFAIQGFGNVGSWAARSIFERGGKVVAVSDISG 240
           REAATG GV+FATEAL AEYGKSI  +TF IQGFGNVG+WAA+ I E+GGKVVAVSDI+G
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIKNPNGIDIKALLKHKEGNGTLKDFPGGDAMDPNELLVHECDVLIPCALGGVLNKENAA 300
           AI+NP GIDI AL+KHK+  G+L DF GGDAM+ +ELL+HECDVLIPCALGGVLNKENA 
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAG 300

Query: 301 DVKAKFVIEAANHPTDPDADEILSKKGVVILPDIYANAGGVTVSYFEWVQNIQGFMWDEE 360
           DVKAKF++EAANHPTDPDADEILSKKGV+ILPDIYANAGGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 DVKAKFIVEAANHPTDPDADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNKELKNYMTRAFRNIKAMCKIHDCDLRMGAFTLGVNRVARATLLRGWEA 411
           KVN EL+ YMTRAF NIK MC  H C+LRMGAFTLGVNRVARAT LRGWEA
Sbjct: 361 KVNLELQKYMTRAFHNIKTMCHTHSCNLRMGAFTLGVNRVARATQLRGWEA 411


>AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 |
           chr5:6006172-6008248 FORWARD LENGTH=411
          Length = 411

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/411 (80%), Positives = 371/411 (90%)

Query: 1   MNALAATNRNFKRAARILGLDAKLENSLMIPFREIKVECTIPKDDGTLVSYVGFRIQHDN 60
           MNALAATNRNFK AAR+LGLD+KLE SL+IPFREIKVECTIPKDDGTL S+VGFR+QHDN
Sbjct: 1   MNALAATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPKDLSLSELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P  LS+SELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSKLSISELERL 120

Query: 121 TRVFTQKIHDLIGVQRDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG+  DVPAPDMGT  QTMAWILDEYSKFHG+SPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVIFATEALFAEYGKSISDMTFAIQGFGNVGSWAARSIFERGGKVVAVSDISG 240
           R+AATG GV+F TEAL  E+GK+IS   F IQGFGNVGSWAA+ I E+GGK+VAVSDI+G
Sbjct: 181 RDAATGRGVMFGTEALLNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSDITG 240

Query: 241 AIKNPNGIDIKALLKHKEGNGTLKDFPGGDAMDPNELLVHECDVLIPCALGGVLNKENAA 300
           AIKN +GIDI ALLKH + +  +K F G D +DPN +LV +CD+L+P ALGGV+N+ENA 
Sbjct: 241 AIKNKDGIDIPALLKHTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENAN 300

Query: 301 DVKAKFVIEAANHPTDPDADEILSKKGVVILPDIYANAGGVTVSYFEWVQNIQGFMWDEE 360
           ++KAKF+IEAANHPTDPDADEILSKKGVVILPDIYAN+GGVTVSYFEWVQNIQGFMW+EE
Sbjct: 301 EIKAKFIIEAANHPTDPDADEILSKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWEEE 360

Query: 361 KVNKELKNYMTRAFRNIKAMCKIHDCDLRMGAFTLGVNRVARATLLRGWEA 411
           KVN ELK YMTR+F+++K MCK H CDLRMGAFTLGVNRVA+AT+LRGW A
Sbjct: 361 KVNDELKTYMTRSFKDLKEMCKTHSCDLRMGAFTLGVNRVAQATILRGWGA 411


>AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 |
           chr3:1006913-1008846 FORWARD LENGTH=411
          Length = 411

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/409 (79%), Positives = 371/409 (90%)

Query: 1   MNALAATNRNFKRAARILGLDAKLENSLMIPFREIKVECTIPKDDGTLVSYVGFRIQHDN 60
           MNALAATNRNFK A+R+LGLD+KLE SL+IPFREIKVECTIPKDDGTL S+VGFR+QHDN
Sbjct: 1   MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPKDLSLSELERL 120
           ARGPMKGGIRYHPEV+PDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P +LSLSELERL
Sbjct: 61  ARGPMKGGIRYHPEVEPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSELSLSELERL 120

Query: 121 TRVFTQKIHDLIGVQRDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG+  DVPAPDMGT  QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVIFATEALFAEYGKSISDMTFAIQGFGNVGSWAARSIFERGGKVVAVSDISG 240
           R+AATG GV+FATEAL  E+GK+IS   FAIQGFGNVGSWAA+ I ++GGK+VAVSD++G
Sbjct: 181 RDAATGRGVLFATEALLNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSDVTG 240

Query: 241 AIKNPNGIDIKALLKHKEGNGTLKDFPGGDAMDPNELLVHECDVLIPCALGGVLNKENAA 300
           AIKN NGIDI +LL+H E N  +K F G D++DP+ +LV +CD+L+P ALGGV+N+ENA 
Sbjct: 241 AIKNNNGIDILSLLEHAEENRGIKGFDGADSIDPDSILVEDCDILVPAALGGVINRENAN 300

Query: 301 DVKAKFVIEAANHPTDPDADEILSKKGVVILPDIYANAGGVTVSYFEWVQNIQGFMWDEE 360
           ++KAKF+IE ANHPTDP+ADEIL KKGV+ILPDIYAN+GGVTVSYFEWVQNIQGFMWDEE
Sbjct: 301 EIKAKFIIEGANHPTDPEADEILKKKGVMILPDIYANSGGVTVSYFEWVQNIQGFMWDEE 360

Query: 361 KVNKELKNYMTRAFRNIKAMCKIHDCDLRMGAFTLGVNRVARATLLRGW 409
           KVN+ELK YMTR F+++K MC+ H CDLRMGAFTLG+NRVA+AT +RGW
Sbjct: 361 KVNRELKTYMTRGFKDLKEMCQTHSCDLRMGAFTLGINRVAQATTIRGW 409


>AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2357546 FORWARD LENGTH=309
          Length = 309

 Score =  545 bits (1405), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 256/297 (86%), Positives = 278/297 (93%)

Query: 1   MNALAATNRNFKRAARILGLDAKLENSLMIPFREIKVECTIPKDDGTLVSYVGFRIQHDN 60
           MNALAATNRNF+ A+RILGLD+K+E SLMIPFREIKVECTIPKDDGTLVSY+GFR+QHDN
Sbjct: 1   MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDN 60

Query: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCNPKDLSLSELERL 120
           ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGC+P+DLSLSELERL
Sbjct: 61  ARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERL 120

Query: 121 TRVFTQKIHDLIGVQRDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180
           TRVFTQKIHDLIG+  DVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG
Sbjct: 121 TRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLG 180

Query: 181 REAATGLGVIFATEALFAEYGKSISDMTFAIQGFGNVGSWAARSIFERGGKVVAVSDISG 240
           REAATG GV+FATEAL AEYGKSI  +TF IQGFGNVG+WAA+ I E+GGKVVAVSDI+G
Sbjct: 181 REAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITG 240

Query: 241 AIKNPNGIDIKALLKHKEGNGTLKDFPGGDAMDPNELLVHECDVLIPCALGGVLNKE 297
           AI+NP GIDI AL+KHK+  G+L DF GGDAM+ +ELL+HECDVLIPCALGGVLNK 
Sbjct: 241 AIRNPEGIDINALIKHKDATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKS 297


>AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr1:19181741-19186297 FORWARD LENGTH=637
          Length = 637

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 159/357 (44%), Gaps = 10/357 (2%)

Query: 28  LMIPFREIKVECTIPKDDGTLVSYVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLM 87
           L+ P R I        D G      GFR+Q + A GP +GGIR+HP ++      L    
Sbjct: 239 LLEPERMIVFRVPWIDDRGETHVNRGFRVQFNQALGPCRGGIRFHPSMNLSIAKFLGFQQ 298

Query: 88  TWKTAVADIPYGGAKGGIGCNPKDLSLSELERLTRVFTQKIHDLIGVQRDVPAPDMGTNA 147
           T K A++    GGA GG   +PK  S +E+ R  + F  +++  +G  +D+P+ ++G   
Sbjct: 299 TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMNEMYRYMGPDKDLPSEEVGVGT 358

Query: 148 QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGLGVIFATEALFAEYGKSISDM 207
           + M ++  +Y +  G      TG  I    S  R  A+G GV++    + A+  K I  +
Sbjct: 359 REMGYLFGQYRRLAGQFQGSFTGPRIYWAASSLRTEASGYGVVYFARLILADMNKEIKGL 418

Query: 208 TFAIQGFGNVGSWAARSIFERGGKVVAVSDISGAIKNPNGIDIK--ALLKH-KEGNGTLK 264
              + G G +       +   G   V VSD  G + + +G D    A L+  K    +L+
Sbjct: 419 RCVVSGCGKIAMHVVEKLIACGAHPVTVSDSKGYLVDDDGFDYMKLAFLRDIKSQQRSLR 478

Query: 265 DFPGGDA----MDPNELLVHECDVLIPCALGGVLNKENAADV---KAKFVIEAANHPTDP 317
           D+    A     D  +     CDV  PCA    +++ +A ++     + ++E +N P   
Sbjct: 479 DYSKTYARAKYFDELKPWNERCDVAFPCASQNEVDQADAINLVNAGCRLLVEGSNMPCTA 538

Query: 318 DADEILSKKGVVILPDIYANAGGVTVSYFEWVQNIQGFMWDEEKVNKELKNYMTRAF 374
           +A ++  K  V+I P I A AGGV     E ++      W  E     L+  + + +
Sbjct: 539 EAVDVFRKANVLIAPAIAAGAGGVAAGEIEVLRESNSMQWSAEDFESRLQEALKQTY 595