Miyakogusa Predicted Gene
- Lj2g3v1988870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1988870.1 Non Chatacterized Hit- tr|I3SBI0|I3SBI0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,98.91,2.94273e-44,L37a: ribosomal protein L37a,Ribosomal protein
L37ae; 60S RIBOSOMAL PROTEIN L37A,NULL; Ribosomal_L37,CUFF.38286.1
(92 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10950.1 | Symbols: | Zinc-binding ribosomal protein family ... 174 1e-44
AT3G60245.1 | Symbols: | Zinc-binding ribosomal protein family ... 174 1e-44
>AT3G10950.1 | Symbols: | Zinc-binding ribosomal protein family
protein | chr3:3423893-3424566 FORWARD LENGTH=92
Length = 92
Score = 174 bits (440), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 89/91 (97%)
Query: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+K+FCEFCGKY+VKRK VGIWGCKDC
Sbjct: 1 MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDC 60
Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
GKVKAGGAYT+NTASAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91
>AT3G60245.1 | Symbols: | Zinc-binding ribosomal protein family
protein | chr3:22268803-22269750 FORWARD LENGTH=92
Length = 92
Score = 174 bits (440), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/92 (92%), Positives = 88/92 (95%)
Query: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSK+FCEFCGKY VKRKAVGIWGCKDC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDC 60
Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 92
GKVKAGGAYT+NTASAVTVRSTIRRLREQ EG
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQIEG 92