Miyakogusa Predicted Gene

Lj2g3v1988690.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1988690.2 tr|G7JYP5|G7JYP5_MEDTR Lon protease homolog
OS=Medicago truncatula GN=MTR_5g013790 PE=3 SV=1,88.54,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Ribosomal protein
S5 domain 2-like,Riboso,CUFF.38269.2
         (860 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47040.1 | Symbols: LON2 | lon protease 2 | chr5:19093356-190...  1318   0.0  
AT5G26860.1 | Symbols: LON_ARA_ARA, LON1 | lon protease 1 | chr5...   452   e-127
AT3G05790.1 | Symbols: LON4 | lon protease 4 | chr3:1720154-1725...   428   e-120
AT3G05780.1 | Symbols: LON3 | lon protease 3 | chr3:1714941-1719...   416   e-116

>AT5G47040.1 | Symbols: LON2 | lon protease 2 |
           chr5:19093356-19098678 REVERSE LENGTH=888
          Length = 888

 Score = 1318 bits (3410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/860 (76%), Positives = 725/860 (84%), Gaps = 6/860 (0%)

Query: 4   CNECSVKLVEQELWQREDKGLIGILPVRDAAETEVKPVGPTIS--QDGDTLDQSSKVHGA 61
            +  SV LVEQELWQ+E+KGLIGILPVRD AE     +G  I+     D+ ++S K    
Sbjct: 32  TSHSSVTLVEQELWQKEEKGLIGILPVRDDAEG--SSIGTMINPGAGSDSGERSLKFLVG 89

Query: 62  SSDSHKLDAKAQNDVVHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELST 121
           ++D+ K DAK Q D+  WH RGVAARALHLSRGVEKPSGRVTY+VVLEGL RF+VQEL  
Sbjct: 90  TTDAQKSDAKDQQDL-QWHTRGVAARALHLSRGVEKPSGRVTYVVVLEGLSRFNVQELGK 148

Query: 122 RGTYHTARISSLEMNKTEMEQVEHDPDFIMLSRQFKATAMELISVLEQKQKTGGRTKVLL 181
           RG Y  ARI+SLEM K E+EQV+ DPDF+ LSRQFK TAMEL+SVLEQKQKTGGRTKVLL
Sbjct: 149 RGPYSVARITSLEMTKAELEQVKQDPDFVALSRQFKTTAMELVSVLEQKQKTGGRTKVLL 208

Query: 182 ETVPVHKLADIFVASFEISFEEQLSMLDSVDAKLRLSKATELVDRHLQSIRVAEKITQKV 241
           ETVP+HKLADIFVASFE+SFEEQLSMLDSVD K+RLSKATELVDRHLQSIRVAEKITQKV
Sbjct: 209 ETVPIHKLADIFVASFEMSFEEQLSMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 268

Query: 242 EGQLSKSQKEFLLRQQMRAIKXXXXXXXXXXXXXXXXXRKMQSAGMPQSIWKHAHRELRR 301
           EGQLSKSQKE+LLRQQMRAIK                 RKMQ+AGMP +IWKHA RELRR
Sbjct: 269 EGQLSKSQKEYLLRQQMRAIKEELGDNDDDEDDVAALERKMQAAGMPSNIWKHAQRELRR 328

Query: 302 LKKMQPQQPGYSSSRAYLDLLADLPWQKASEEHEMDLKSAQERLDSDHYGLAKVKQRIIE 361
           LKKMQPQQPGY+SSR YL+LLADLPW KASEEHE+DLK+A+ERLDSDHYGLAKVKQRIIE
Sbjct: 329 LKKMQPQQPGYNSSRVYLELLADLPWDKASEEHELDLKAAKERLDSDHYGLAKVKQRIIE 388

Query: 362 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRR 421
           YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAAL RKFVR+SLGGVKDEADIRGHRR
Sbjct: 389 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRR 448

Query: 422 TYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 481
           TYIGSMPGRLIDGLKRV VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK+FNDHY
Sbjct: 449 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHY 508

Query: 482 LNVPFDLSKVIFVATANRAQQIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLDQHG 541
           LNVP+DLSKV+FVATANR Q IPPPLLDRME+IELPGYT EEKLKIAM+HLIPRVLDQHG
Sbjct: 509 LNVPYDLSKVVFVATANRVQPIPPPLLDRMELIELPGYTQEEKLKIAMRHLIPRVLDQHG 568

Query: 542 LSSEYLQIPEGMVQLVIQRYTREAGVXXXXXXXXXXXXXXXXXXXXXXXXXPLNKEVQGL 601
           LSSE+L+IPE MV+ +IQRYTREAGV                         PL+K+VQ L
Sbjct: 569 LSSEFLKIPEAMVKNIIQRYTREAGVRSLERNLAALARAAAVMVAEHEQSLPLSKDVQKL 628

Query: 602 TTPLLENRLTDGAEVEMEVIPMDVNSRDISNTFRITSPLVVNEAILEKVLGPPKFDGREA 661
           T+PLL  R+ +G EVEMEVIPM VN  +I  TF+  S LVV+E +LEK+LGPP+FD  EA
Sbjct: 629 TSPLLNGRMAEGGEVEMEVIPMGVNDHEIGGTFQSPSALVVDETMLEKILGPPRFDDSEA 688

Query: 662 AERVAAPGICVGLVWTTFGGEVQFVEATEMVGKGDLHLTGQLGDVIKESAQIALTWVXXX 721
           A+RVA+ G+ VGLVWTTFGGEVQFVEAT MVGKG++HLTGQLGDVIKESAQ+ALTWV   
Sbjct: 689 ADRVASAGVSVGLVWTTFGGEVQFVEATSMVGKGEMHLTGQLGDVIKESAQLALTWVRAR 748

Query: 722 XXXXXXXXXEGINLLEGRDIHIHFPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMT 781
                      +N+L+GRDIHIHFPAGA+PKDGPSAGVTLVTALVSLFS+KRVR+DTAMT
Sbjct: 749 ASDFKLALAGDMNVLDGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRADTAMT 808

Query: 782 GEMTLRGLVLPVGGIKDKILAAHRCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRME 841
           GEMTLRGLVLPVGGIKDKILAAHR GIKRVI+P+RN KDLVEVP++VL +LE++LAKRME
Sbjct: 809 GEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPQRNSKDLVEVPAAVLSSLEVILAKRME 868

Query: 842 DVLEQALEGGCPWRHQ-SKL 860
           DVLE A EGGCPWR+  SKL
Sbjct: 869 DVLENAFEGGCPWRNNYSKL 888


>AT5G26860.1 | Symbols: LON_ARA_ARA, LON1 | lon protease 1 |
           chr5:9451183-9456631 FORWARD LENGTH=940
          Length = 940

 Score =  452 bits (1164), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 277/765 (36%), Positives = 409/765 (53%), Gaps = 45/765 (5%)

Query: 106 VVLEGLCRFSVQELSTRGTYHTARISSLEMNKTEMEQVEHDPDFIMLSRQFKATAMELIS 165
           V+L G  R  ++E+ +     T ++  L+ N  +M     D D +      KAT+ E+IS
Sbjct: 192 VILVGHRRLRIKEMVSEEPL-TVKVDHLKDNPFDM-----DDDVV------KATSFEVIS 239

Query: 166 VLEQKQKTGGRTKVLLETVPVH-------KLADIFVASFEISFEEQLSMLDSVDAKLRLS 218
            L    KT    +  ++T   H       +LAD   A    +  +   +L+ +D   RL 
Sbjct: 240 TLRDVLKTSSLWRDHVQTYTQHIGDFTYPRLADFGAAICGANRHQAQEVLEELDVHKRLR 299

Query: 219 KATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKXXXXXXXXXXXXXXXX 278
              EL+ + ++  ++ E I + +E ++S  Q+ +LL +Q++AIK                
Sbjct: 300 LTLELMKKEMEISKIQETIAKAIEEKISGEQRRYLLNEQLKAIKKELGVETDDKSALSAK 359

Query: 279 XRKM---QSAGMPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKASEEHE 335
            ++        +P  + +    EL +L+ ++     ++ +R YLD L  LPW   S E+ 
Sbjct: 360 FKERIEPNKEKIPAHVLQVIEEELTKLQLLEASSSEFNVTRNYLDWLTILPWGNYSNEN- 418

Query: 336 MDLKSAQERLDSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 395
            D+  AQ  LD DHYGL+ VK+RI+E++AV +L+  ++G ++C  GPPGVGKTS+  SIA
Sbjct: 419 FDVARAQTILDEDHYGLSDVKERILEFIAVGRLRGTSQGKIICLSGPPGVGKTSIGRSIA 478

Query: 396 AALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTGS 455
            AL+RKF R S+GG+ D A+I+GHRRTY+G+MPG+++  LK V   NP++L+DEIDK G 
Sbjct: 479 RALNRKFFRFSVGGLADVAEIKGHRRTYVGAMPGKMVQCLKSVGTANPLVLIDEIDKLGR 538

Query: 456 DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDRMEVIE 515
              GDPASALLE+LDPEQN  F DHYL+V  DLSKV+FV TAN    IP PLLDRMEVI 
Sbjct: 539 GHAGDPASALLELLDPEQNANFLDHYLDVTIDLSKVLFVCTANVIDMIPNPLLDRMEVIS 598

Query: 516 LPGYTPEEKLKIAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVXXXXXXXX 575
           + GY  +EK+ IA  +L        G+  E +++ +  +  +I+ Y REAGV        
Sbjct: 599 IAGYITDEKVHIARDYLEKTARGDCGVKPEQVEVSDAALLSLIENYCREAGVRNLQKQIE 658

Query: 576 XXXXXXXXXXXX--------XXXXXPLNKEVQGLTTPLLENRLTDGAEVEMEVIPMDVNS 627
                                    P   E+       +EN       VE   +      
Sbjct: 659 KIYRKIALKLVREGAVPEEPAVASDPEEAEIVADVGESIENHT-----VEENTVSSAEEP 713

Query: 628 RDISNTFRIT-SPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFV 686
           ++ + T +I    ++++E+ L   +G P F   +  E+    G+ +GL WT+ GG   ++
Sbjct: 714 KEEAQTEKIAIETVMIDESNLADYVGKPVFHAEKLYEQTPV-GVVMGLAWTSMGGSTLYI 772

Query: 687 EAT---EMVGKGDLHLTGQLGDVIKESAQIALTWVXXXXXXXXXXXXEGINLLEGRDIHI 743
           E T   E  GKG L++TGQLGDV+KESAQIA T                        +H+
Sbjct: 773 ETTVVEEGEGKGGLNITGQLGDVMKESAQIAHTVARKIMLEKEPEN----QFFANSKLHL 828

Query: 744 HFPAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAA 803
           H PAGA PKDGPSAG T++T+L+SL +KK VR D AMTGE+TL G +LP+GG+K+K +AA
Sbjct: 829 HVPAGATPKDGPSAGCTMITSLLSLATKKPVRKDLAMTGEVTLTGRILPIGGVKEKTIAA 888

Query: 804 HRCGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQAL 848
            R  IK +I PE N +D  E+  +V   L +        + E A 
Sbjct: 889 RRSQIKTIIFPEANRRDFDELAENVKEGLNVHFVDDYGKIFELAF 933


>AT3G05790.1 | Symbols: LON4 | lon protease 4 | chr3:1720154-1725182
           REVERSE LENGTH=942
          Length = 942

 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/686 (37%), Positives = 371/686 (54%), Gaps = 33/686 (4%)

Query: 188 KLADIFVASFEISFEEQLSMLDSVDAKLRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 247
           KLAD        +  +   +L+ +D   RL    ELV + ++  ++ E I + VE + S 
Sbjct: 261 KLADFGAGISGANKHQNQGVLEELDVHKRLELTLELVKKEVEINKIQESIAKAVEEKFSG 320

Query: 248 SQKEFLLRQQMRAIKXXXXXXXXXXXXXXXXXRKMQSA---GMPQSIWKHAHRELRRLKK 304
            ++  +L++Q+ AIK                 R         +P  + K    EL++L+ 
Sbjct: 321 DRRRIILKEQINAIKKELGGETDSKSALSEKFRGRIDPIKDKIPGHVLKVIEEELKKLQL 380

Query: 305 MQPQQPGYSSSRAYLDLLADLPWQKASEEHEMDLKSAQERLDSDHYGLAKVKQRIIEYLA 364
           ++     +  +  YLD L  LPW   S+E+  ++  A++ LD DHYGL+ VK+RI+E++A
Sbjct: 381 LETSSSEFDVTCNYLDWLTVLPWGNFSDEN-FNVLRAEKILDEDHYGLSDVKERILEFIA 439

Query: 365 VRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYI 424
           V  L+  ++G ++C  GP GVGKTS+  SIA ALDRKF R S+GG+ D A+I+GHRRTYI
Sbjct: 440 VGGLRGTSQGKIICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYI 499

Query: 425 GSMPGRLIDGLKRVAVCNPVMLLDEIDKTGSDVR---GDPASALLEVLDPEQNKTFNDHY 481
           G+MPG+++  LK V   NP++L+DEIDK G  VR   GDPASA+LE+LDPEQN  F DHY
Sbjct: 500 GAMPGKMVQCLKNVGTENPLVLIDEIDKLG--VRGHHGDPASAMLELLDPEQNANFLDHY 557

Query: 482 LNVPFDLSKVIFVATANRAQQIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLDQHG 541
           L+VP DLSKV+FV TAN    IP PLLDRMEVI L GY  +EK+ IA  +L        G
Sbjct: 558 LDVPIDLSKVLFVCTANVTDTIPGPLLDRMEVITLSGYITDEKMHIARDYLEKTARRDCG 617

Query: 542 LSSEYLQIPEGMVQLVIQRYTREAGVXXXXXXXXXXXXXXXXXXXXXXXXXPL------- 594
           +  E + + +     +I+ Y REAGV                          +       
Sbjct: 618 IKPEQVDVSDAAFLSLIEHYCREAGVRNLQKQIEKIFRKIALKLVRKAASTEVPRISDDV 677

Query: 595 ---NKEVQGLTTPLLENRLT--DGAEVEMEVI----PMDVNSRDISNTFRITSPLVVNEA 645
               +E + L    LE+  T  +G+ V  + +    P +  +             +++E+
Sbjct: 678 TTDTEETKSLAKTDLESPETSAEGSTVLTDELATGDPTESTTEQSGEVAETVEKYMIDES 737

Query: 646 ILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEAT---EMVGKGDLHLTGQ 702
            L   +G P F   +  E+    G+ +GL WT+ GG   ++E T   E  GKG LH+TG+
Sbjct: 738 NLSDYVGKPVFQEEKIYEQTPV-GVVMGLAWTSMGGSTLYIETTFVEEGEGKGGLHITGR 796

Query: 703 LGDVIKESAQIALTWVXXXXXXXXXXXXEGINLLEGRDIHIHFPAGAIPKDGPSAGVTLV 762
           LGDV+KESA+IA T                  L     +H+H PAGA PKDGPSAG T++
Sbjct: 797 LGDVMKESAEIAHTVARRIMLEKEPEN----KLFANSKLHLHVPAGATPKDGPSAGCTMI 852

Query: 763 TALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKRVIIPERNLKDLV 822
           T+L+SL  KK VR D AMTGE+TL G +L +GG+K+K +AA R  +K +I PE N +D  
Sbjct: 853 TSLLSLALKKPVRKDLAMTGEVTLTGRILAIGGVKEKTIAARRSQVKVIIFPEANRRDFD 912

Query: 823 EVPSSVLVNLEILLAKRMEDVLEQAL 848
           E+  +V   LE+      E + E A 
Sbjct: 913 ELARNVKEGLEVHFVDEYEQIFELAF 938


>AT3G05780.1 | Symbols: LON3 | lon protease 3 | chr3:1714941-1719608
           REVERSE LENGTH=924
          Length = 924

 Score =  416 bits (1070), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/583 (39%), Positives = 334/583 (57%), Gaps = 37/583 (6%)

Query: 287 MPQSIWKHAHRELRRLKKMQPQQPGYSSSRAYLDLLADLPWQKASEEHEMDLKSAQERLD 346
           +P+ + K    E  +L+ ++     +  +  YL  L  LPW   S E+  D+  A++ LD
Sbjct: 354 IPKHVIKVMEEEFTKLEMLEENYSDFDLTYNYLHWLTVLPWGNFSYEN-FDVLRAKKILD 412

Query: 347 SDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRIS 406
            DHYGL+ VK+RI+E++AV +L+  ++G ++C  GPPGVGKTS+  SIA ALDRKF R S
Sbjct: 413 EDHYGLSDVKERILEFIAVGRLRGTSQGKIICLSGPPGVGKTSIGRSIARALDRKFFRFS 472

Query: 407 LGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLLDEIDKTGSDVRGDPASALL 466
           +GG+ D A+I+GH +TY+G+MPG+++  LK V   NP++L DEIDK G    GDPASALL
Sbjct: 473 VGGLSDVAEIKGHCQTYVGAMPGKMVQCLKSVGTANPLILFDEIDKLGRCHTGDPASALL 532

Query: 467 EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQQIPPPLLDRMEVIELPGYTPEEKLK 526
           EV+DPEQN  F DH+LNV  DLSKV+FV TAN  + IP PLLDRMEVI+L GY  +EK+ 
Sbjct: 533 EVMDPEQNAKFLDHFLNVTIDLSKVLFVCTANVIEMIPGPLLDRMEVIDLSGYVTDEKMH 592

Query: 527 IAMKHLIPRVLDQHGLSSEYLQIPEGMVQLVIQRYTREAGVXXXXXXXXX---------- 576
           IA  +L+ +     G+  E++ + +  +  +I+ Y REAGV                   
Sbjct: 593 IARDYLVKKTCRDCGIKPEHVDLSDAALLSLIENYCREAGVRNLQKQIEKIYRKVALELV 652

Query: 577 ---XXXXXXXXXXXXXXXXPLNKEVQGLTTP----LLENRLTDGAEVEMEVIPMDVNSRD 629
                                + EV+ +       +LE+   D  E + +       S  
Sbjct: 653 RQGAVSFDVTDTKDTKSLAKTDSEVKRMKVADIMKILESATGDSTESKTK------QSGL 706

Query: 630 ISNTFRITSPLVVNEAILEKVLGPPKFDGREAAERVAAPGICVGLVWTTFGGEVQFVEAT 689
           ++ TF     ++++E+ L   +G P F   +  E+    G+ +GL WT+ GG   ++E T
Sbjct: 707 VAKTFE---KVMIDESNLADYVGKPVFQEEKIYEQTPV-GVVMGLAWTSMGGSTLYIETT 762

Query: 690 ---EMVGKGDLHLTGQLGDVIKESAQIALTWVXXXXXXXXXXXXEGINL-LEGRDIHIHF 745
              E +GKG LH+TGQLGDV+KESAQIA T              E  NL      +H+H 
Sbjct: 763 FVEEGLGKGGLHITGQLGDVMKESAQIAHT-----VARRIMFEKEPENLFFANSKLHLHV 817

Query: 746 PAGAIPKDGPSAGVTLVTALVSLFSKKRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHR 805
           P GA PKDGPSAG T++T+ +SL  KK VR D AMTGE+TL G +LP+GG+K+K +AA R
Sbjct: 818 PEGATPKDGPSAGCTMITSFLSLAMKKLVRKDLAMTGEVTLTGRILPIGGVKEKTIAARR 877

Query: 806 CGIKRVIIPERNLKDLVEVPSSVLVNLEILLAKRMEDVLEQAL 848
             IK +I PE N +D  E+  ++   L++      E + + A 
Sbjct: 878 SQIKTIIFPEANRRDFEELAENMKEGLDVHFVDEYEKIFDLAF 920