Miyakogusa Predicted Gene

Lj2g3v1986450.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1986450.1 tr|B6T5A5|B6T5A5_MAIZE Allyl alcohol
dehydrogenase-like protein OS=Zea mays PE=4 SV=1,48.51,6e-19,
,CUFF.38249.1
         (99 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59840.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   111   1e-25

>AT3G59840.1 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN: chloroplast,
          chloroplast envelope; EXPRESSED IN: 23 plant
          structures; EXPRESSED DURING: 13 growth stages; Has 72
          Blast hits to 72 proteins in 12 species: Archae - 0;
          Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72;
          Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
          | chr3:22105853-22106146 REVERSE LENGTH=97
          Length = 97

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 69/101 (68%), Gaps = 6/101 (5%)

Query: 1  MGILWWRNG--KKSQPEEKSPVEKANGGAAAGVQVPGMNGAMEVKRPPNTSVTVFEFGSV 58
          MGIL W  G  K SQ E   P  +      +    PGMNGA+EV RP     TVFEFGSV
Sbjct: 1  MGILSWFTGSPKPSQSETSKP--EMIQMPKSETPAPGMNGAIEVPRP--DRATVFEFGSV 56

Query: 59 AASNDKVTLAGYCPVSEDLEPCRWEILPAIQSNAPQFRVVF 99
          AA+ D+VTLAGYCPVS+DLEPCRWEILPA   +APQFRVVF
Sbjct: 57 AATGDRVTLAGYCPVSDDLEPCRWEILPADGKDAPQFRVVF 97