Miyakogusa Predicted Gene

Lj2g3v1984730.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1984730.2 Non Chatacterized Hit- tr|I1G0U1|I1G0U1_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica PE,36.42,5e-17,no
description,NULL; coiled-coil,NULL; ACETYLORNITHINE DEACETYLASE,NULL;
PEPTIDASE M20 FAMILY MEMBER,CUFF.38215.2
         (289 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17830.1 | Symbols:  | Peptidase M20/M25/M40 family protein |...   496   e-141
AT4G17830.2 | Symbols:  | Peptidase M20/M25/M40 family protein |...   490   e-139

>AT4G17830.1 | Symbols:  | Peptidase M20/M25/M40 family protein |
           chr4:9915916-9918049 FORWARD LENGTH=440
          Length = 440

 Score =  496 bits (1278), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 234/294 (79%), Positives = 260/294 (88%), Gaps = 6/294 (2%)

Query: 1   MRKLGETKPNLKSTVVAVFIANEENSAITGVGVDALVKDGLLNKLKNGPLFWIDTADKQP 60
           M+KLG+ KP LKSTVVAVFIA+EENS+I GVGVD LVKD LL+KLK+GPL+WIDTADKQP
Sbjct: 145 MKKLGQAKPALKSTVVAVFIASEENSSIPGVGVDMLVKDKLLDKLKSGPLYWIDTADKQP 204

Query: 61  CVGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMDAMKEIQLRFYRDFPPHPQEQVYGF 120
           CVGTGGMIPWKL  TGKLFHSGLAHKAIN +ELAM+ +KEIQ RFYRDFPPHPQE+VYGF
Sbjct: 205 CVGTGGMIPWKLQFTGKLFHSGLAHKAINAMELAMEGLKEIQARFYRDFPPHPQEEVYGF 264

Query: 121 ATPSTMKPTQWSYPGGGINQIPGECTISGDV------SVKDVMKKLQEYVGDINENISKL 174
           ATPSTMKPTQW YP GGINQIPGECT+SGDV       VK+V+ KLQEYV DIN NI +L
Sbjct: 265 ATPSTMKPTQWCYPAGGINQIPGECTVSGDVRLTPFYDVKEVITKLQEYVDDINGNIERL 324

Query: 175 EARGPVSKYVLSDENLRGSLTITFDEAMSGVACDLNSRGFHVLCKATEEVVGHVKPYSMT 234
           E RGPVSKYVL DENLRG LT++FDEA +GVAC+L+S GFHVLCKATEEVVGHVKPYS+T
Sbjct: 325 ETRGPVSKYVLPDENLRGRLTLSFDEASAGVACNLDSPGFHVLCKATEEVVGHVKPYSIT 384

Query: 235 GSLPLIRELQDEGFDVQTSGYGLMATYHAQNEYCLFNDMSQGYRVFTSVISQLE 288
           G+LPLIR+LQDEGFDVQTSGYGLMATYHA+NEYCL  DM QG+ VF  +ISQLE
Sbjct: 385 GTLPLIRDLQDEGFDVQTSGYGLMATYHAKNEYCLLTDMCQGFDVFIRIISQLE 438


>AT4G17830.2 | Symbols:  | Peptidase M20/M25/M40 family protein |
           chr4:9915916-9918049 FORWARD LENGTH=445
          Length = 445

 Score =  490 bits (1262), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 234/299 (78%), Positives = 260/299 (86%), Gaps = 11/299 (3%)

Query: 1   MRKLGETKPNLKSTVVAVFIANEENSAITGVGVDALVKDGLLNKLKNGPL-----FWIDT 55
           M+KLG+ KP LKSTVVAVFIA+EENS+I GVGVD LVKD LL+KLK+GPL     +WIDT
Sbjct: 145 MKKLGQAKPALKSTVVAVFIASEENSSIPGVGVDMLVKDKLLDKLKSGPLLVSILYWIDT 204

Query: 56  ADKQPCVGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMDAMKEIQLRFYRDFPPHPQE 115
           ADKQPCVGTGGMIPWKL  TGKLFHSGLAHKAIN +ELAM+ +KEIQ RFYRDFPPHPQE
Sbjct: 205 ADKQPCVGTGGMIPWKLQFTGKLFHSGLAHKAINAMELAMEGLKEIQARFYRDFPPHPQE 264

Query: 116 QVYGFATPSTMKPTQWSYPGGGINQIPGECTISGDV------SVKDVMKKLQEYVGDINE 169
           +VYGFATPSTMKPTQW YP GGINQIPGECT+SGDV       VK+V+ KLQEYV DIN 
Sbjct: 265 EVYGFATPSTMKPTQWCYPAGGINQIPGECTVSGDVRLTPFYDVKEVITKLQEYVDDING 324

Query: 170 NISKLEARGPVSKYVLSDENLRGSLTITFDEAMSGVACDLNSRGFHVLCKATEEVVGHVK 229
           NI +LE RGPVSKYVL DENLRG LT++FDEA +GVAC+L+S GFHVLCKATEEVVGHVK
Sbjct: 325 NIERLETRGPVSKYVLPDENLRGRLTLSFDEASAGVACNLDSPGFHVLCKATEEVVGHVK 384

Query: 230 PYSMTGSLPLIRELQDEGFDVQTSGYGLMATYHAQNEYCLFNDMSQGYRVFTSVISQLE 288
           PYS+TG+LPLIR+LQDEGFDVQTSGYGLMATYHA+NEYCL  DM QG+ VF  +ISQLE
Sbjct: 385 PYSITGTLPLIRDLQDEGFDVQTSGYGLMATYHAKNEYCLLTDMCQGFDVFIRIISQLE 443