Miyakogusa Predicted Gene

Lj2g3v1981870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1981870.1 tr|C6FDB1|C6FDB1_9CONI Phloem protein (Fragment)
OS=Pseudotsuga macrocarpa PE=4 SV=1,40.83,2e-18,seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.38155.1
         (423 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10150.1 | Symbols:  | Carbohydrate-binding protein | chr1:33...   351   4e-97
AT1G59510.1 | Symbols: CF9 | Carbohydrate-binding protein | chr1...   314   9e-86
AT3G49790.1 | Symbols:  | Carbohydrate-binding protein | chr3:18...   299   2e-81

>AT1G10150.1 | Symbols:  | Carbohydrate-binding protein |
           chr1:3326160-3327404 FORWARD LENGTH=414
          Length = 414

 Score =  351 bits (901), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 190/419 (45%), Positives = 267/419 (63%), Gaps = 28/419 (6%)

Query: 10  LQLVEKGFDYIRKRKKWIF---ISVALGFCAYSAYHAPSIARKRRKLSKLLGALFSVAEA 66
           L+L EKG    ++R+KW+    IS   G+ AY  YH PS+ARKR++L KL GA+ SVAE 
Sbjct: 4   LRLREKGIFLSQRRRKWLIFMAISGVSGYGAYKVYHLPSVARKRKRLFKLFGAIVSVAEL 63

Query: 67  VAESADTIGVISRDMKEFLQSDSDQVPKSLNQISKVARSQHFSDSLTTVTHAVTVGVLRG 126
           +++SA+T+ ++SRD+K+FL SDSD++P SL QI+K+  S  F+DSL+ V+ AVT+G  RG
Sbjct: 64  ISDSAETLSMVSRDVKDFLNSDSDEIPNSLKQIAKITTSNEFTDSLSRVSQAVTIGAFRG 123

Query: 127 NQSANRTGAE--QTGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCSDGVQS 184
            +S +  G    +  + SSVVD V+DK+ +  G+GF SVV+GSFA+NLVL FY S  V+S
Sbjct: 124 YKSESSIGDSGIEKSSDSSVVDRVIDKVFSEAGTGFVSVVVGSFAKNLVLGFY-SGKVES 182

Query: 185 HDEFXXXXXXXXXXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLDKTMH 244
                                  P WV  + D++C EL+ +C++ F STA+ V+LDKTM 
Sbjct: 183 -----------GVKCEGSDSSETPRWVTLLGDDKCRELLADCIERFTSTAIGVYLDKTMD 231

Query: 245 INTYDQFFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSGSDSNLDI 304
           INTYDQ F GLTNPKH+DSV+D+L+SVCNGA+E+ V+TSH V TS++  +      + D 
Sbjct: 232 INTYDQIFEGLTNPKHQDSVKDVLVSVCNGALETIVRTSHDVFTSSRSKNVIEEIEDDDF 291

Query: 305 GETTPNRVETSTMESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRS 364
                 R   S M S+ GD  V+ N  GW   +++TLA+PSNRR + DVTGRVT ET RS
Sbjct: 292 KSNGSAR---SKMVSESGD-GVKSN--GWTEAIATTLAVPSNRRFMFDVTGRVTLETTRS 345

Query: 365 FMEFVLKTLCASVRRCAHSVHDAVLEIMR----YAAAKFSVIATICISLCLHVMD-CPR 418
            + F++       R+  + VH+ V +  R    Y  AK SVI T+C++L LH++  C R
Sbjct: 346 IIAFIMVKTFQGFRKSINVVHEEVTDRGRQAVEYVGAKSSVIITVCLALYLHIISGCVR 404


>AT1G59510.1 | Symbols: CF9 | Carbohydrate-binding protein |
           chr1:21859768-21860913 FORWARD LENGTH=381
          Length = 381

 Score =  314 bits (804), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 162/403 (40%), Positives = 243/403 (60%), Gaps = 58/403 (14%)

Query: 21  RKRKKWIFISVALG---FCAYSAYHAPSIARKRRKLSKLLGALFSVAEAVAESADTIGVI 77
           ++R+KW+ +    G   +  Y  Y++  IA+K ++L KL   + S AE V +SA+TI ++
Sbjct: 15  QRRRKWLILLAVFGVSGYGVYRVYNSQYIAKKTKRLMKLFSGIVSFAEMVIDSAETISIV 74

Query: 78  SRDMKEFLQSDSDQVPKSLNQISKVARSQHFSDSLTTVTHAVTVGVLRGNQSANRTGAEQ 137
           SRD+KEFL+S+S ++P SL Q+SK+ +S+ F+DSL  V+ AV +GV RG  S      E 
Sbjct: 75  SRDLKEFLESNSHEIPNSLKQLSKITKSKEFTDSLARVSEAVAIGVFRGYNSDPNVEKES 134

Query: 138 TGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCSD-GVQSHDEFXXXXXXXX 196
             +       V+D++ + EG+GF SVV+GSFA+NLVL FY  +  + S D          
Sbjct: 135 NLS-------VVDRVFSEEGAGFVSVVVGSFAKNLVLGFYSGEIEIGSDDSLK------- 180

Query: 197 XXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLDKTMHINTYDQFFAGLT 256
                      P W++ + D++C EL+ +C++ F S+AV+V++DKT+ +NTYDQ FAGLT
Sbjct: 181 -----------PRWMNLLSDDKCRELLADCIERFTSSAVSVYIDKTVGVNTYDQIFAGLT 229

Query: 257 NPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSGSDSNLDIGETTPNRVETST 316
           NPKH DS RD+L+SVCNGA+E+F++TSH V TS+    G  +DS+L   E   N      
Sbjct: 230 NPKHRDSARDVLVSVCNGALETFMRTSHDVFTSS----GEKTDSSLRKSENREN------ 279

Query: 317 MESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSFMEFVLKTLCAS 376
                          GW   +S+TLA+PSNR+ + DVTGRVT ET+RS +EFV+     S
Sbjct: 280 ---------------GWAEALSTTLAVPSNRKFMFDVTGRVTLETMRSILEFVILKTSQS 324

Query: 377 VRRCAHSVHDAVLE----IMRYAAAKFSVIATICISLCLHVMD 415
            +R    +H+ V E    ++ Y  AK SVI T+C+++  H+ +
Sbjct: 325 FKRSLDVIHEEVTERGRQVVGYVGAKSSVIITVCLAVYFHIFN 367


>AT3G49790.1 | Symbols:  | Carbohydrate-binding protein |
           chr3:18468296-18469396 REVERSE LENGTH=366
          Length = 366

 Score =  299 bits (766), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 169/417 (40%), Positives = 249/417 (59%), Gaps = 54/417 (12%)

Query: 7   LPELQLVEKG-FDYIRKRKKWIFISVALGFCAYSAYHAPSIARKRRKLSKLLGALFSVAE 65
           + +L L ++G FD+  K KKWI ++V+ G+ A+  YH+PSI++KR+++SKL   L ++ E
Sbjct: 1   MDKLGLSKRGYFDFALKNKKWILLAVS-GYGAFRVYHSPSISQKRKRISKLFTLLLNLIE 59

Query: 66  AVAESADTIGVISRDMKEFLQSDSDQVPKSLNQISKVARSQHFSDSLTTVTHAVTVGVLR 125
           A ++SA+T+ VIS+D+ EFL+SDSDQ+P SL QISK+A+S   + SL   T A+TVG++R
Sbjct: 60  AASDSAETVSVISKDLTEFLRSDSDQIPNSLKQISKIAKSDELNSSLIRFTQAMTVGLIR 119

Query: 126 GNQSANRTGAEQTGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCSDGVQSH 185
           G            G+GS   D V+DKL T  GSGFAS ++GSFARNLV+A Y S G  S+
Sbjct: 120 GIDD---------GSGSGFTDRVMDKLFTKSGSGFASAIVGSFARNLVVALYSSAGDGSN 170

Query: 186 DEFXXXXXXXXXXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLDKTMHI 245
            +                       +DAV  +    LIG+CVQ FVSTAV+V+LDKT  +
Sbjct: 171 SKL----------------------LDAVFSDDGRRLIGDCVQRFVSTAVSVYLDKTSDV 208

Query: 246 NTYDQFFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSGSDSNLDIG 305
           N +D  FAGLTNPKHE  V+  L+++CN A+E+FV+ S   +   +      S   L +G
Sbjct: 209 NVFDDLFAGLTNPKHEGKVKQTLVTLCNSAVETFVRASRKPVQLNRSSSCQDSSQTLTVG 268

Query: 306 ETTPNRVETSTMESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSF 365
            T                      ++ W+ +VSS+L++PSNR+ V+D+TGRVTFETVRS 
Sbjct: 269 ST---------------------KQATWIDRVSSSLSVPSNRKYVVDLTGRVTFETVRSL 307

Query: 366 MEFVLKTLCASVRRCAHSVHDAVLEIMRYAAAKFSVIATICISLCLHVMDCPRALVP 422
           +E +++     V      V +   E  R+   K S++ ++C+SLCL +++ P  L P
Sbjct: 308 LEVLIERANGKVESYVEKVRERGNETRRFVRVKTSLLHSLCLSLCLQIVEAPWMLTP 364