Miyakogusa Predicted Gene
- Lj2g3v1968200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1968200.1 Non Chatacterized Hit- tr|K4DB33|K4DB33_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,23.25,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR_2,Pentatricopeptide repeat; seg,NULL; PPR,Penta,CUFF.38106.1
(554 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-116
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 119 7e-27
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 113 3e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 106 5e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 103 3e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 5e-22
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 102 1e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 100 4e-21
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 97 2e-20
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 96 6e-20
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 94 3e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 87 4e-17
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 86 5e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 2e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 79 7e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 77 2e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 2e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 75 9e-14
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 75 1e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 75 1e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 73 6e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 4e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 62 9e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 4e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 59 7e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 58 1e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 1e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 58 1e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 57 3e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 57 3e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 57 3e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 5e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 54 3e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 52 9e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 51 2e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 51 2e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 50 5e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 296/445 (66%), Gaps = 6/445 (1%)
Query: 107 DEGKLENVVSLLQREDADGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRW 166
D+ KLE+V+SLL+ ++ SLE L+A+++ LH DFV+ +NL+RF +W
Sbjct: 126 DDEKLESVLSLLRSDEE--SLEFGLNALNVDLHLDFVVRVFESPGISG---KNLIRFLKW 180
Query: 167 VWKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIF 226
+ VTT +VESL+ A+ +S R + Y LW+L ILN+LI
Sbjct: 181 ATQNEEITVTTSLVESLLVAI-ASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIA 239
Query: 227 YFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIP 286
F +LG KAA ++F K E F PNA+TY+ T++AL + S D A SV +KML + +
Sbjct: 240 LFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLS 299
Query: 287 DEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM 346
+ E++G+I+ W CK K +EA++VY+ K K P V L+ L +GT+ A EM
Sbjct: 300 EGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEM 359
Query: 347 LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
L D+ G+ R+ IKP+ V+ +LCR+++V AK L+LDMI+ GP PGNAVFN V+ SK
Sbjct: 360 LGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSK 419
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM 466
G++ +A E++KL+ESRGLKPDVYTY VI+SGY+ GG M+ A++IL EAKK H LSPV
Sbjct: 420 TGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVT 479
Query: 467 YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
YH+L+RGYCK+E++DEALKLL EM GV+ + DEY+KLIQS CLKA+DWE AE L EM
Sbjct: 480 YHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM 539
Query: 527 KENGLYLKGVTRALIRAVKEMENEA 551
K+ GL+L +++ LIRAVKEME+EA
Sbjct: 540 KQKGLHLNAISQGLIRAVKEMESEA 564
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 42/348 (12%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
I LI S+ AL+L ++ CVP+AET++ I L + + A+ + +
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY--------------------------- 311
ML PD+ G ++ LCK +V A ++
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 312 KAVVEK-----GKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----Y 362
KAV+ G P + + N L+ ++ G V LALE+L D MR KP Y
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGY-WKEGLVGLALEVLHD----MRNKGCKPNVYSY 427
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
+V C++ + A ++ +M A+G P FN +I+ + K + +AVE+ + +
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
+G KPDVYT+ ++SG E++ A +L + V + V Y++L+ + + + E
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
A KL+ EM G + Y+ LI+ LC +A + + A L +M +G
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLC-RAGEVDKARSLFEKMLRDG 594
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 158/336 (47%), Gaps = 17/336 (5%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F + +AL L CVPN+ Y I +L + + + A + ++M +PD
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD 286
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
E D++ LCK ++ EA + ++ +G P + +L+ L + G V A ++
Sbjct: 287 AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC-KIGRVDAAKDLF 345
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN-GPPPGNAVFNFVITGYSK 406
IP K I + ++ + AK ++ DM+ + G P +N +I GY K
Sbjct: 346 YRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM 466
G +G A+E++ + ++G KP+VY+Y ++V G+ G+++ A +L E + + V
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 467 YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
++ L+ +CK + EA+++ EM G + V ++ LI LC + + + A L +M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDM 520
Query: 527 KENGLYLKGVT----------RALIRAVKEMENEAV 552
G+ VT R I+ +++ NE V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 11/314 (3%)
Query: 219 TILNKLIFYF---SQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSV 275
I N LI F +L + KA L D + VP+ TY+ I ++ L A V
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLS--DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 276 SQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAY 335
M + P+ ++ CK K+ EA+ V + G P N L+
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 336 ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
E+ +P A+E+ +++P K + + +++ LC V ++ A L+ DMI+ G
Sbjct: 472 EH-RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+N +I + + GE+ +A +++ + +G D TY ++ G GE++ AR + E+
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
++ S + + L+ G C+ +EA++ EM G + ++ LI LC +A
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC-RAGR 649
Query: 516 WETA----EKLQAE 525
E KLQAE
Sbjct: 650 IEDGLTMFRKLQAE 663
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 129/289 (44%), Gaps = 1/289 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI+ + + G ALE+ C PN +Y + + D A +V +M
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ ++ CK ++ EA +++ + KG P + + N L+ L E +
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIK 511
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
AL +L+D+ + Y ++ A R ++ A++L+ +M+ G P +N +I
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G + GE+ +A + + + G P + ++++G G +E A + +E S
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
V ++SL+ G C+ + ++ L + +++ G+ ++ L+ LC
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
+L L G K A V+ ++ + K PP +V K + AL +L+D
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVNEIDSALSLLRD---- 242
Query: 354 MRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
M KH P Y ++ +L + V A QL+ +M G P FN VI G K
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+ +A +M+ + RG PD TY +++G G ++AA+ + K V+ +++
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNT 358
Query: 470 LVRGYCKMEQFDEALKLLTEMKDS-GVRISVDEYDKLI 506
L+ G+ + D+A +L++M S G+ V Y+ LI
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 358 AIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
K Y V+ L A + DM++ PP F V+ + V E+ A+ ++
Sbjct: 181 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLL 240
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
+ + G P+ Y ++ S + A ++LEE V ++ ++ G CK
Sbjct: 241 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 300
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
++ +EA K++ M G Y L+ LC
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 175/412 (42%), Gaps = 55/412 (13%)
Query: 163 FFRW--VWKENSSNVTTPVVE--SLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXX 218
F +W + EN S V V L+ C + EK F L EL
Sbjct: 145 FNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNV------ 198
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
I LI + G + A +LF + V N TY I L+++ + + +K
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M + P+ ++ LCK + K+A V+ + E+G + + N L+G L E
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE-- 316
Query: 339 TVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
+ L + M+ I P Y ++ C V +G A L D+ + G P
Sbjct: 317 ---MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP--------------------------- 427
+N +++G+ + G+ A +M+K +E RG+KP
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 428 --------DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
DV+TY+V++ G+ G+M A ++ + + + + V+Y++++ GYCK
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
ALKLL EM++ + +V Y +I+ LC K + AE+L +M ++G+
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLC-KERKSKEAERLVEKMIDSGI 544
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y ++ C+ ++ AK L +M G + +I G K G Q EM + ++
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
G+ P++YTY +++ G + A ++ +E ++ + V Y++L+ G C+ + +
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL---------- 531
EA K++ +MK G+ ++ Y+ LI C A L ++K GL
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFC-GVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 532 ----YLKGVTRALIRAVKEMENEAVEP 554
KG T + VKEME ++P
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKP 406
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ F + G+ A ++ + E P+ TY I R + A + M +
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAY-ENGTV 340
+PD ++ C ++ EA ++K++VEK P N ++ L Y + G+
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI--LGYCKEGSS 494
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
AL++LK++ + Y ++ LC+ + A++L+ MI +G P ++ + +
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 3/313 (0%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G+ AL LF++ E + TY I L +D + + ++M+ IPD
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ K K+ EA +Y ++ +G P + N L+ EN + A +M +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN-CLHEANQMFDLMV 377
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
+ I Y ++ + C+ K V +L ++ + G P +N ++ G+ + G++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A E+ + + SRG+ P V TY +++ G + GE+ A +I E+ +K+ L +Y+ ++
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G C + D+A L + D GV+ V Y+ +I LC K A+ L +MKE+G
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG-SLSEADMLFRKMKEDGC 556
Query: 532 YLKGVT-RALIRA 543
T LIRA
Sbjct: 557 TPDDFTYNILIRA 569
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 14/316 (4%)
Query: 223 KLIFYFSQLGNG-KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
KL+F FS LG K E P+ T+ + A ++ +M++
Sbjct: 120 KLLFAFSVLGRAWKLGYE-----------PDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ PD V ++ LC +V EA + +VE G P + ++ +L ++G
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC-KSGNSA 227
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
LAL++ + + K ++ Y V+ +LC+ A L +M G ++ +I
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G G+ +M++ + R + PDV T++ ++ + G++ A+++ E
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
+ Y+SL+ G+CK EA ++ M G + Y LI S C KA + +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC-KAKRVDDGMR 406
Query: 522 LQAEMKENGLYLKGVT 537
L E+ GL +T
Sbjct: 407 LFREISSKGLIPNTIT 422
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 1/271 (0%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + G A EL+++ P+ TY+ I + + A+ + M+
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
PD ++ CK K+V + +++ + KG P + N LV ++G + A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC-QSGKLNAA 439
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
E+ +++ ++ Y ++ LC ++ A ++ M + G ++N +I G
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
++ A + L +G+KPDV TY V++ G G + A + + K++
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
Y+ L+R + +++L+ EMK G
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 1/235 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F + A ++FD C P+ TY I + + D + +++
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
IP+ ++ C+ K+ A +++ +V +G P + + L+ L +NG +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC-DNGELN 472
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
ALE+ + + I Y ++ +C V A L + G P +N +I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
G K G + +A + + ++ G PD +TY +++ + G + ++ +++EE K
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%)
Query: 375 VGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAV 434
V A L MI + P P FN + + ++ + + K +E G++ D+YT +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 435 IVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
+++ Y ++ A +L A K + + +LV G+C + EA+ L+ M +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 495 VRISVDEYDKLIQSLCLKA 513
R + LI LCLK
Sbjct: 171 QRPDLVTVSTLINGLCLKG 189
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 14/316 (4%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F GN AL LFDK E C+PN TY+ I + D + + M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ ++ LC+ ++KE V + +G + N L+ E G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE-GNFH 327
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
AL M +M +H + P Y +++ ++C+ ++ A + + M G P +
Sbjct: 328 QALVM----HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
++ G+S+ G M +A +++ + G P V TY +++G+ G+ME A +LE+ K+
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 458 NHSVLSP--VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
LSP V Y +++ G+C+ DEAL++ EM + G++ Y LIQ C +
Sbjct: 444 KG--LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 516 WETAEKLQAEMKENGL 531
E + L EM GL
Sbjct: 502 KEACD-LYEEMLRVGL 516
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 136/286 (47%), Gaps = 6/286 (2%)
Query: 248 QCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEA 307
Q PN TY+ I+ D A ++ KM +P+ ++ CK +K+ +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIK--PYLAV 365
+ +++ KG P + S N ++ L E ++ + + + R +++ Y +
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE---MNRRGYSLDEVTYNTL 316
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
++ C+ + A + +M+ +G P + +I K G M +A+E + + RGL
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
P+ TY +V G+S G M A ++L E N S V Y++L+ G+C + ++A+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+L +MK+ G+ V Y ++ C ++ D + A +++ EM E G+
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFC-RSYDVDEALRVKREMVEKGI 481
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 26/341 (7%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI + GN A+E D+ PN TY + + + A V ++M D
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P ++ C K+++A AV + + EKG P + S + ++ + V A
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC-RSYDVDEA 469
Query: 344 LEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
L + +M + IKP Y ++++ C + A L +M+ G PP +
Sbjct: 470 LR----VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I Y G++ +A+++ + +G+ PDV TY+V+++G + A+++L +
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 460 SVLSPVMYH---------------SLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDK 504
SV S V YH SL++G+C EA ++ M + Y+
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 505 LIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTR-ALIRAV 544
+I C +A D A L EM ++G L VT AL++A+
Sbjct: 646 MIHGHC-RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 15/251 (5%)
Query: 318 GKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGA 377
G P + S N ++ + A + K++ + Y ++R C ++
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 378 AKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVS 437
A L M G P +N +I GY K+ ++ ++++ + +GL+P++ +Y V+++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 438 GYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
G G M+ +L E + L V Y++L++GYCK F +AL + EM G+
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 498 SVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY--------------LKGVTRALIRA 543
SV Y LI S+C KA + A + +M+ GL KG R
Sbjct: 344 SVITYTSLIHSMC-KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 544 VKEMENEAVEP 554
++EM + P
Sbjct: 403 LREMNDNGFSP 413
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 137/327 (41%), Gaps = 24/327 (7%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI + + GN AL + + P+ TY I ++ + + A +M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+E ++ + + EA+ V + + + G P + + N L+ G +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV-TGKME 432
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
A+ +L+D M++ + P Y V+ CR DV A ++ +M+ G P +
Sbjct: 433 DAIAVLED----MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+ +I G+ + +A ++ + + GL PD +TY +++ Y G++E A ++ E +
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE---------------MKDSGVRISVDEY 502
+ V Y L+ G K + EA +LL + + ++ I
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 503 DKLIQSLCLKAMDWETAEKLQAEMKEN 529
LI+ C+K M E + ++ + +N
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKN 635
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 37/180 (20%)
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRG----------------------------- 424
++VF+ V+ YS++ + +A+ ++ L ++ G
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 425 -------LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
+ P+V+TY +++ G+ G ++ A + ++ + + + V Y++L+ GYCK+
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
+ D+ KLL M G+ ++ Y+ +I LC + E + L EM G L VT
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL-TEMNRRGYSLDEVT 312
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 130/290 (44%), Gaps = 10/290 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ T++ I L F+ +S + QKM + P +L W CK + K A +
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+ KG + + N L+ L N + +L+D MRK I P Y ++
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSN-RIAKGYLLLRD----MRKRMIHPNEVTYNTLI 345
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
V A QL+ +M++ G P + FN +I G+ G +A++M ++E++GL
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
P +Y V++ G E + AR K+N + + Y ++ G CK DEA+ L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGV 536
L EM G+ + Y LI C K ++TA+++ + GL G+
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFC-KVGRFKTAKEIVCRIYRVGLSPNGI 514
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 144/384 (37%), Gaps = 67/384 (17%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI FS G A +L ++ F PN T++ I F A + M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAY------ 335
P E G +L LCK + A +G Y M VG++ Y
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLA---------RGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 336 --ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
+NG + A+ +L ++ D I Y A++ C+V AK+++ + G P
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512
Query: 394 NAV-----------------------------------FNFVITGYSKVGEMGQAVEMMK 418
+ FN ++T K G++ +A E M+
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Query: 419 LLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
+ S G+ P+ ++ +++GY N GE A + +E K + Y SL++G CK
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 479 QFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKE---------- 528
EA K L + + Y+ L+ ++C K+ + A L EM +
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC-KSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 529 ----NGLYLKGVTRALIRAVKEME 548
+GL KG T I KE E
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAE 715
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 134/312 (42%), Gaps = 6/312 (1%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N ++ ++ + G KAA+EL D + + TY+ I L R + + + M
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+E ++ KV A + ++ G P + N L+ E G
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE-GNFK 390
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
AL+M + + Y ++ LC+ + A+ + M NG G + +I
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G K G + +AV ++ + G+ PD+ TY+ +++G+ G + A++I+ +
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV--CRIYRVG 508
Query: 462 LSP--VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
LSP ++Y +L+ C+M EA+++ M G ++ L+ SLC KA A
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC-KAGKVAEA 567
Query: 520 EKLQAEMKENGL 531
E+ M +G+
Sbjct: 568 EEFMRCMTSDGI 579
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 141/329 (42%), Gaps = 3/329 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I +S++G + +L + PN TY+ + + ++ + + ++
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 822
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD+ ++ +C+ ++ + KA + +G + N L+ K NG +
Sbjct: 823 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC-ANGEIN 881
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A +++K + A+V L R ++ ++ +M G P + + +I
Sbjct: 882 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G +VG++ A + + + + + P + +V + G+ + A +L K V
Sbjct: 942 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 1001
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
+ + +L+ CK EAL+L M + G+++ + Y+ LI LC K D A +
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG-DMALAFE 1060
Query: 522 LQAEMKENGLYLKGVT-RALIRAVKEMEN 549
L EMK +G T +ALIR + E
Sbjct: 1061 LYEEMKGDGFLANATTYKALIRGLLARET 1089
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 122/296 (41%), Gaps = 5/296 (1%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI + G G A +FD+ P TY ++ L + A + +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
+ D +L +CK + +A +++ +V++ P + L+ L + TV +A
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV-IA 707
Query: 344 LEMLKDIP--GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
+ K+ G++ + + Y V + + A M G P N +I
Sbjct: 708 ILFAKEAEARGNVLPNKVM-YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 766
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
GYS++G++ + +++ + ++ P++ TY +++ GYS ++ + + N +
Sbjct: 767 DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA-MDW 516
+ HSLV G C+ + LK+L GV + ++ LI C ++W
Sbjct: 827 PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 882
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%)
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G P N ++ K GE +K + R + PDV T+ ++++ G E +
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
++++ +K+ + V Y++++ YCK +F A++LL MK GV V Y+ LI
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 509 LC 510
LC
Sbjct: 313 LC 314
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 3/295 (1%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
VP+ Y Q ++ L+ + +M P+ + LC+ K++EA
Sbjct: 196 VPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEK 255
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+++ + + G P + + + ++ + G V A + K+I + + +V
Sbjct: 256 MFELMKKHGVLPNLYTYSAMIDGYC-KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGF 314
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C+ +++ A+ L + M+ G P V+N +I G+ K G M +AV ++ +ES L PDV
Sbjct: 315 CKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
+TY ++++G ++ A ++ ++ K S Y+SL+ GYCK ++AL L +E
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSE 434
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRA 543
M SGV ++ + LI C D + A L EM G+ VT ALI A
Sbjct: 435 MTASGVEPNIITFSTLIDGYC-NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
+PN TY I + A + +++L A+ +P+ G ++ CK +++ A +
Sbjct: 266 LPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARS 325
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
++ +V+ G P + N L+ ++G + A+ +L ++ + Y ++ L
Sbjct: 326 LFVHMVKFGVDPNLYVYNCLIHGHC-KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C V A +L M P +A +N +I GY K M QA+++ + + G++P++
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
T++ ++ GY N +++AA + E V V Y +L+ + K EAL+L ++
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 490 MKDSGV 495
M ++G+
Sbjct: 505 MLEAGI 510
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 122/300 (40%), Gaps = 10/300 (3%)
Query: 236 AALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL 295
A LF F PN Y+ I + A + +M PD ++
Sbjct: 322 TARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381
Query: 296 GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
LC +V EA+ +++ + + +P ++ N L+ E +E D+ +M
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN-----MEQALDLCSEMT 436
Query: 356 KHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
++P + ++ C V+D+ AA L +M G P + +I + K M
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
+A+ + + G+ P+ +T+A +V G+ G + A +E + S + V + L+
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G C+ A + ++M+ G+ + Y +++ L+ LQ +M + G+
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH-LQEKRITDTMMLQCDMIKTGI 615
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
MI+ G P ++ + K G + +++ + S G+KP+VY Y + + +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 445 MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDK 504
ME A K+ E KK+ + + Y +++ GYCK +A L E+ + + +V +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 505 LIQSLCLKAMDWETAEKLQAEMKENGL 531
L+ C KA + TA L M + G+
Sbjct: 310 LVDGFC-KARELVTARSLFVHMVKFGV 335
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 2/310 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + QLG K A L E P+ +Y + R D + + M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ G I+G LC+ K+ EA + ++ +G P L+ + G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC-KRGDIR 368
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A + ++ + Y A++ C++ D+ A +L +M G P + F +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
GY K G M A + + G P+V TY ++ G G++++A ++L E K
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
+ Y+S+V G CK +EA+KL+ E + +G+ Y L+ + C K+ + + A++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC-KSGEMDKAQE 547
Query: 522 LQAEMKENGL 531
+ EM GL
Sbjct: 548 ILKEMLGKGL 557
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 139/312 (44%), Gaps = 2/312 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ LI F + G+ +AA + F + P+ TY I + A + +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
PD +++ CK +K+A V+ +++ G P + + L+ L E G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE-GD 471
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ A E+L ++ + I Y ++V LC+ ++ A +L+ + A G +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ Y K GEM +A E++K + +GL+P + T+ V+++G+ G +E K+L
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ ++SLV+ YC A + +M GV Y+ L++ C KA + + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC-KARNMKEA 650
Query: 520 EKLQAEMKENGL 531
L EMK G
Sbjct: 651 WFLFQEMKGKGF 662
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 1/283 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
+LI + + G+ K A + + C PN TY I L + DSA+ + +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
P+ I+ LCK ++EA + G + L+ ++G +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC-KSGEM 542
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A E+LK++ G + I + ++ C + ++L+ M+A G P FN +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ Y + A + K + SRG+ PD TY +V G+ M+ A + +E K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYD 503
+S Y L++G+ K ++F EA ++ +M+ G+ + +D
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL 363
++EA V++ ++ G + S N + +L+ + A+ + ++ P + Y
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
V+ +C++ + A L+L M G P ++ V+ GY + GE+ + +++++++ +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
GLKP+ Y Y I+ ++ A + E + + V+Y +L+ G+CK A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
K EM + V Y +I C + D A KL EM GL VT
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFC-QIGDMVEAGKLFHEMFCKGLEPDSVT 423
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 2/310 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + QLG K A L E P+ +Y + R D + + M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ G I+G LC+ K+ EA + ++ +G P L+ + G +
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC-KRGDIR 368
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A + ++ + Y A++ C++ D+ A +L +M G P + F +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
GY K G M A + + G P+V TY ++ G G++++A ++L E K
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
+ Y+S+V G CK +EA+KL+ E + +G+ Y L+ + C K+ + + A++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC-KSGEMDKAQE 547
Query: 522 LQAEMKENGL 531
+ EM GL
Sbjct: 548 ILKEMLGKGL 557
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 139/312 (44%), Gaps = 2/312 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ LI F + G+ +AA + F + P+ TY I + A + +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
PD +++ CK +K+A V+ +++ G P + + L+ L E G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE-GD 471
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ A E+L ++ + I Y ++V LC+ ++ A +L+ + A G +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ Y K GEM +A E++K + +GL+P + T+ V+++G+ G +E K+L
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ ++SLV+ YC A + +M GV Y+ L++ C KA + + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC-KARNMKEA 650
Query: 520 EKLQAEMKENGL 531
L EMK G
Sbjct: 651 WFLFQEMKGKGF 662
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 1/283 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
+LI + + G+ K A + + C PN TY I L + DSA+ + +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
P+ I+ LCK ++EA + G + L+ ++G +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC-KSGEM 542
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A E+LK++ G + I + ++ C + ++L+ M+A G P FN +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ Y + A + K + SRG+ PD TY +V G+ M+ A + +E K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYD 503
+S Y L++G+ K ++F EA ++ +M+ G+ + +D
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL 363
++EA V++ ++ G + S N + +L+ + A+ + ++ P + Y
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
V+ +C++ + A L+L M G P ++ V+ GY + GE+ + +++++++ +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
GLKP+ Y Y I+ ++ A + E + + V+Y +L+ G+CK A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
K EM + V Y +I C + D A KL EM GL VT
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFC-QIGDMVEAGKLFHEMFCKGLEPDSVT 423
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 142/308 (46%), Gaps = 1/308 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I +LG K A+E+ D+ C PN TY+ I L + + + A+ +++ +
Sbjct: 334 NSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD ++ LC + + A +++ + KG P + N L+ L G +
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC-SKGKLD 452
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
AL MLK + ++ Y ++ C+ A+++ +M +G + +N +I
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G K + A ++M + G KPD YTY +++ + GG+++ A I++ N
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
V Y +L+ G CK + + A KLL ++ G+ ++ Y+ +IQ L K E
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Query: 522 LQAEMKEN 529
+ +++N
Sbjct: 633 FREMLEQN 640
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
+ N LI + + A+ + + + VP+ +T+ +Q D A + ++
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEA-HAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
M++ V I+ CK +V++A + + + + G +P + N LV L +
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC-KA 308
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
G V A+E++ + + + Y +V+ LC++ +V A +++ MI P +
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N +I+ K ++ +A E+ ++L S+G+ PDV T+ ++ G A ++ EE +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
Y+ L+ C + DEAL +L +M+ SG SV Y+ LI C KA
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC-KANKTR 487
Query: 518 TAEKLQAEMKENGLYLKGVT 537
AE++ EM+ +G+ VT
Sbjct: 488 EAEEIFDEMEVHGVSRNSVT 507
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM- 279
N LI N + A+ELF++ C P+ TY+ I +L D A ++ ++M
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 280 ------------------------LDAQSIPDEEKV----------GDILGWLCKGKKVK 305
+A+ I DE +V ++ LCK ++V+
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 306 EAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAV 365
+A + ++ +G+ P + N L+ G + A ++++ + + + I Y +
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFC-RGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMK-LLESRG 424
+ LC+ V A +L+ + G +N VI G + + +A+ + + +LE
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 425 LKPDVYTYAVIVSGYSNGG 443
PD +Y ++ G NGG
Sbjct: 642 APPDAVSYRIVFRGLCNGG 660
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G P + FN +I + ++ A+ M++ + S GL PD T+ ++ GY G+++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS-GVRISVDEYDKLIQ 507
+I E+ + S V + +V G+CK + ++AL + EM + G ++ L+
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 508 SLC 510
LC
Sbjct: 304 GLC 306
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 8/296 (2%)
Query: 242 DKFEFFQCV------PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL 295
D F+FF+ + PN TY + L S + A+ + M+ + P+ +L
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 296 GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
K KV EA +++ +V P + + + L+ L + + A +M +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD-RIDEANQMFDLMVSKGC 326
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+ Y ++ C+ K V +L +M G +N +I G+ + G++ +A E
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
++ G+ PD++TY +++ G + GE+E A I E+ +K L V Y +++RG C
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
K + +EA L + G++ + Y ++ LC K + E E L +MK+ GL
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE-VEALYTKMKQEGL 501
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 141/311 (45%), Gaps = 2/311 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N+L+ +L + L K E + T++ I A S+ KML
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD +G ++ C+ +V +A ++ +VE G P + + N ++ L + V
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC-KTKRV 206
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A + K+I + + Y A+V LC A +L+ DMI P ++ +
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ + K G++ +A E+ + + + PD+ TY+ +++G ++ A ++ +
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
+ V Y++L+ G+CK ++ ++ +KL EM G+ + Y+ LIQ +A D + A+
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF-FQAGDVDKAQ 385
Query: 521 KLQAEMKENGL 531
+ ++M G+
Sbjct: 386 EFFSQMDFFGI 396
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 8/238 (3%)
Query: 233 NGKA--ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEK 290
NGK A ELF++ P+ TY I L H D A+ + M+ + D
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 291 VGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDI 350
++ CK K+V++ +++ + ++G + N L+ ++ G V A E +
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF-FQAGDVDKAQEFFSQM 391
Query: 351 PGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
I Y ++ LC ++ A + DM + VI G K G++
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK-----KNHSVLS 463
+A + L +GLKPD+ TY ++SG G + + + K KN LS
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 136/291 (46%), Gaps = 1/291 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
+L+ +++ + LF++ + P T + + + S AS KM+
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD +L C ++++A A++ ++ G P + + L+ L +N +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC-KNRHL 204
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+E+ + + + + Y A+V LC + G A L+ DM+ P F +
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I + KVG++ +A E+ ++ + PDV+TY +++G G ++ AR++ ++N
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+ V+Y +L+ G+CK ++ ++ +K+ EM GV + Y LIQ CL
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 10/299 (3%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ELF++ PN TY+ + L + A+ + + M+ + P+ ++
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
K K+ EA +Y +++ YP + + L+ L G + A +M M +
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY-GLLDEARQMFYL----MER 321
Query: 357 HAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
+ P Y ++ C+ K V ++ +M G + +I GY VG
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVR 472
A E+ + SR PD+ TY V++ G G++E A I E +K ++ V Y +++
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 473 GYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G CK+ + ++A L + G++ +V Y +I C + + E A+ L +MKE+G
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE-ADSLFKKMKEDGF 499
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 142/295 (48%), Gaps = 2/295 (0%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ L D+ + PN T++ I L+ H+ A ++ +M+ PD G ++
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
LCK + A ++ K + EKGK + + V AL + ++ +
Sbjct: 229 GLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ Y +++R LC A +L+ DMI P F+ +I + K G++ +A ++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ R + PD++TY+ +++G+ ++ A+ + E + V Y++L++G+CK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
++ +E ++L EM G+ + Y+ LIQ L +A D + A+K+ +M +G+
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL-FQAGDCDMAQKIFKKMVSDGV 461
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 146/326 (44%), Gaps = 7/326 (2%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
TI++ L Y N AL LF + + PN TY+ I+ L + + AS +
Sbjct: 260 TIIDALCNY----KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M++ + P+ ++ K K+ EA +Y ++++ P + + + L+ +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD- 374
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
+ A M + + + Y +++ C+ K V +L +M G +N
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I G + G+ A ++ K + S G+ PD+ TY++++ G G++E A + E +K+
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
Y+ ++ G CK + ++ L + GV+ +V Y +I C K + E
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK-EE 553
Query: 519 AEKLQAEMKENG-LYLKGVTRALIRA 543
A+ L EMKE+G L G LIRA
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 12/284 (4%)
Query: 269 FDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNF 328
D A + +M+ ++ +P + +L + K K ++ + + + S N
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 329 LVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILD 384
L+ +PLAL +L G M K +P + + +L C K + A L+
Sbjct: 121 LINCFC-RRSQLPLALAVL----GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
M P FN +I G + +AV ++ + +RG +PD++TY +V+G G+
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 445 MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDK 504
++ A +L++ +K V+Y +++ C + ++AL L TEM + G+R +V Y+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 505 LIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRA-VKE 546
LI+ LC W A +L ++M E + VT ALI A VKE
Sbjct: 296 LIRCLC-NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 120/271 (44%), Gaps = 1/271 (0%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + G A +L+D+ P+ TY I H D A + + M+
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ ++ CK K+V+E +++ + ++G + N L+ L ++ G +A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL-FQAGDCDMA 449
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
++ K + D I Y ++ LC+ + A + + + P +N +I G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
K G++ ++ L +G+KP+V Y ++SG+ G E A + E K++ ++ +
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
Y++L+R + + +L+ EM+ G
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 146/295 (49%), Gaps = 2/295 (0%)
Query: 236 AALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL 295
AA+ LF + E + TY+ ++ L + ++ + + + M+ + +P+ +L
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 296 GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
K K++EA+ +YK ++ +G P + + N L+ +N + A ML + +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN-RLSEANNMLDLMVRNKC 364
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
I + ++++ C VK V ++ ++ G ++ ++ G+ + G++ A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
+ + + S G+ PDV TY +++ G + G++E A +I E+ +K+ L VMY +++ G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
K + ++A L + GV+ +V Y +I LC K A L +M+E+G
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG-SLSEANILLRKMEEDG 538
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 143/311 (45%), Gaps = 2/311 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN +I F + A + K P+ T++ I+ L+ A + +M+
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ PD I+ +C+ A + + + E+ + + + ++ L +G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC-RDGCI 244
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+ + K++ K ++ Y ++VR LC+ L+ DM++ P FN +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ + K G++ +A E+ K + +RG+ P++ TY ++ GY + A +L+ +N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
V + SL++GYC +++ D+ +K+ + G+ + Y L+Q C ++ + AE
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QSGKIKLAE 423
Query: 521 KLQAEMKENGL 531
+L EM +G+
Sbjct: 424 ELFQEMVSHGV 434
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 133/297 (44%), Gaps = 10/297 (3%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ F + G + A EL+ + PN TY+ + + A+++ M+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ PD ++ C K+V + V++ + ++G + + LV ++G +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC-QSGKIK 420
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
LA E+ ++ M H + P Y ++ LC + A ++ D+ + G ++
Sbjct: 421 LAEELFQE----MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+I G K G++ A + L +G+KP+V TY V++SG G + A +L + ++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAM 514
+ + + Y++L+R + + + KL+ EMK G K++ + L AM
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI-KMVIDMLLSAM 592
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 2/224 (0%)
Query: 303 KVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPY 362
K +A A+++ ++ P + + +A L L+ K + + H I
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIA-RTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
++ CR A ++ ++ G P FN +I G G++ +AV ++ +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
G +PDV TY IV+G G+ A +L + ++ + Y +++ C+ D
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
A+ L EM+ G++ SV Y+ L++ LC KA W L +M
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGALLLKDM 289
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 144/309 (46%), Gaps = 7/309 (2%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
L++ ++ + LE+ D+ + P+ ++ L + + A ++ ++++D
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ ++ LCKG+K EA ++ + + G P + + L+ G + A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC-RRGKLDTA 421
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
L L ++ K ++ PY +++ C+ D+ AA+ + +MI P + ++ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
Y G++ +A+ + + +G+ P +YT+ ++SG G + A K+ E + + +
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ 523
V Y+ ++ GYC+ +A + L EM + G+ Y LI LCL T + +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL------TGQASE 595
Query: 524 AEMKENGLY 532
A++ +GL+
Sbjct: 596 AKVFVDGLH 604
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 2/292 (0%)
Query: 240 LFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLC 299
LFD+ PN TY I R D+A S +M+D ++ C
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 300 KGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAI 359
K + A ++ K P + + L+G G + AL + ++ G +I
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC-SKGKINKALRLYHEMTGKGIAPSI 507
Query: 360 KPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
+ ++ L R + A +L +M P +N +I GY + G+M +A E +K
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+ +G+ PD Y+Y ++ G G+ A+ ++ K + L+ + Y L+ G+C+ +
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+EAL + EM GV + + Y LI LK D + L EM + GL
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDG-SLKHKDRKLFFGLLKEMHDRGL 678
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 16/319 (5%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
+P T + L + F A + M+ PD ++ LC+ K + A
Sbjct: 189 LPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKE 248
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+ + G + N L+ L + V A+ + KD+ G K + Y +V L
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQ-KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C+V++ +++ +M+ P A + ++ G K G++ +A+ ++K + G+ P++
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
+ Y ++ G + A + + K + V Y L+ +C+ + D AL L E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKE--------------NGLYLKG 535
M D+G+++SV Y+ LI C K D AE AEM G KG
Sbjct: 428 MVDTGLKLSVYPYNSLINGHC-KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 536 VTRALIRAVKEMENEAVEP 554
+R EM + + P
Sbjct: 487 KINKALRLYHEMTGKGIAP 505
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I +I S+ G+ K A ++D CVPN TY I L + + A + KM
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 280 LDAQSIPDEEKVGDILGWLCKGK-KVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
S+P++ G L L KG+ +++A ++ A++ KG ++ N L+ + G
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQ-G 801
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
+ A E++ + GD Y ++ LCR DV A +L M G P +N
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
+I G GEMG+A E+ + +GL P+
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 14/316 (4%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + + G+ A E + VP+ +Y I L A +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV-GKLAYENGTV 340
+E +L C+ K++EA +V + +V++G + L+ G L +++ +
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 341 PLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
L LK+ M +KP Y +++ A + D A + MI G P
Sbjct: 666 FFGL--LKE----MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI-LEEA 455
+ VI G K G + +A + ++ P+ TY + + G E++ + + L A
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG-EVDMQKAVELHNA 778
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
+ + Y+ L+RG+C+ + +EA +L+T M GV Y +I LC + D
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC-RRND 837
Query: 516 WETAEKLQAEMKENGL 531
+ A +L M E G+
Sbjct: 838 VKKAIELWNSMTEKGI 853
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 1/264 (0%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
+ G AL L+ + P+ T+ + L+R L A + +M + P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
++ C+ + +A K + EKG P S L+ L + +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
G+ + I Y ++ CR + A + +M+ G + +I G K
Sbjct: 602 GLHKGNCELNEI-CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
+ ++K + RGLKPD Y ++ S G+ + A I + V + V Y
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 468 HSLVRGYCKMEQFDEALKLLTEMK 491
+++ G CK +EA L ++M+
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQ 744
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 187/420 (44%), Gaps = 21/420 (5%)
Query: 109 GKLENVVSLLQREDADGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWVW 168
GK + SLL+R+ A GS+ S + + ++ LR+ G V+ L+ F +
Sbjct: 322 GKFDEAYSLLERQRAKGSIPS-------VIAYNCILTCLRK----MGKVDEALKVFEEMK 370
Query: 169 KENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYF 228
K+ + N++T + L+ +C R + + +EL +N ++
Sbjct: 371 KDAAPNLSTYNI--LIDMLC----RAGKLDTAFELRDSMQKAGLFPNVRT--VNIMVDRL 422
Query: 229 SQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDE 288
+ A +F++ ++ C P+ T+ I L + D A V +KMLD+ +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 289 EKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLK 348
++ + ++ H +YK ++ + P + +N + + ++ G M +
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM-FKAGEPEKGRAMFE 541
Query: 349 DIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVG 408
+I + Y ++ L + +L M G +N VI G+ K G
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 409 EMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYH 468
++ +A ++++ ++++G +P V TY ++ G + ++ A + EEAK L+ V+Y
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 469 SLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKE 528
SL+ G+ K+ + DEA +L E+ G+ ++ ++ L+ +L +KA + A MKE
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL-VKAEEINEALVCFQSMKE 720
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 39/345 (11%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNA-ETYHFTIQALYRHSLFDSASSVSQKMLDA 282
+I +L + A+E F +E +P+ E+Y+ + + R FD+ + +M A
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 283 QSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVG----------- 331
P +++ K K++E + V + + + P S+ L+G
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 332 --------KLAYE---------------NGTVPLALEMLKDIPGDMRKHAIKPYLAVVRA 368
+L YE G V AL +L ++ I Y + +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
+V V A + ++ ANG P + +I K + +AVEM + LE P
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
Y Y ++ GY + G+ + A +LE + S+ S + Y+ ++ KM + DEALK+
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 489 EM-KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
EM KD+ +S Y+ LI LC +A +TA +L+ M++ GL+
Sbjct: 368 EMKKDAAPNLST--YNILIDMLC-RAGKLDTAFELRDSMQKAGLF 409
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 132/293 (45%), Gaps = 8/293 (2%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ LI F++ G +AL L D+ + + Y+ I + + D A ++
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN-G 338
PDE ++G LCK ++ EA +++ + + + P + N ++ + Y + G
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI--MGYGSAG 322
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
A +L+ ++ Y ++ L ++ V A ++ +M + P + +N
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYN 381
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I + G++ A E+ ++ GL P+V T ++V +++ A + EE +
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM--D 439
Query: 459 HSVLSP--VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ V +P + + SL+ G K+ + D+A K+ +M DS R + Y LI++
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 117/271 (43%), Gaps = 2/271 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ N I F ++G A + F + E P+ TY I L + + D A + + +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+ +P ++ K EA+++ + KG P + + N ++ L + G
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLR-KMGK 358
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
V AL++ +++ D + + Y ++ LCR + A +L M G P N
Sbjct: 359 VDEALKVFEEMKKDAAPN-LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ K ++ +A M + ++ + PD T+ ++ G G ++ A K+ E+ +
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
+ ++Y SL++ + + ++ K+ +M
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/349 (18%), Positives = 135/349 (38%), Gaps = 43/349 (12%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+LN + + G + +F++ + + VP+A +Y I L + + + M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLA----- 334
+ + D ++ CK KV +A+ + + + KG P + + ++ LA
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 335 ------YEN-----------------------GTVPLALEMLKDIPGDMRKHAIKPYLAV 365
+E G + A +L+++ + + ++
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ AL + +++ A M P + +I G KV + +A + ++ +G+
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
KP +Y ++SG + G + A + + K N V Y++++ G + +A
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 486 LLTEMKDSGVRI----SVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
L E + G+ I V D L ++ CL E A + A ++E G
Sbjct: 819 LFEETRRRGLPIHNKTCVVLLDTLHKNDCL-----EQAAIVGAVLRETG 862
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 10/316 (3%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
++L+ ++L +A + LF E + ++ I R + A S KM+
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
P G ++ C + EA ++ +V G P + N ++ L E G V
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC-EKGQV 200
Query: 341 PLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
AL++LK M+K I+P Y +++ L G + +++ DM+ G P
Sbjct: 201 NTALDVLKH----MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
F+ +I Y K G++ +A + + R + P++ TY +++G G ++ A+K+L
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
+ V Y++L+ GYCK ++ D+ +K+L M GV Y+ L Q C +A +
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC-QAGKF 375
Query: 517 ETAEKLQAEMKENGLY 532
AEK+ M G++
Sbjct: 376 SAAEKVLGRMVSCGVH 391
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 143/314 (45%), Gaps = 3/314 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
I N +I + G AL++ + P+ TY+ I L+ + ++ +
Sbjct: 185 VIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSD 244
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M+ PD ++ K ++ EA Y ++++ P + + N L+ L +G
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI-HG 303
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
+ A ++L + Y ++ C+ K V +++ M +G +N
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+ GY + G+ A +++ + S G+ PD+YT+ +++ G + G++ A LE+ +K+
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+V+ + Y+ +++G CK ++ ++A L + GV V Y ++ L K + W
Sbjct: 424 KTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRL-WRE 482
Query: 519 AEKLQAEM-KENGL 531
A +L +M KE+GL
Sbjct: 483 AHELYRKMQKEDGL 496
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 378 AKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVS 437
A L DM + P P F+ ++ +K+ + + + + LE G+ D+Y++ ++
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 438 GYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
+ + A L + K S V + SLV G+C + +F EA+ L+ ++ G
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 498 SVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+V Y+ +I SLC K TA + MK+ G+
Sbjct: 183 NVVIYNTIIDSLCEKG-QVNTALDVLKHMKKMGI 215
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 141/283 (49%), Gaps = 6/283 (2%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P++ T++ I L+RH+ A ++ +M+ PD G ++ LCK + A ++
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 311 YKAVVEKGKYPPMSSV-NFLVGKLA-YENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRA 368
K +E+GK P + N ++ L Y+N V AL + ++ + + Y +++R
Sbjct: 244 LKK-MEQGKIEPGVVIYNTIIDALCNYKN--VNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
LC A +L+ DMI P F+ +I + K G++ +A ++ + R + PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
++TY+ +++G+ ++ A+ + E + V Y++L++G+CK ++ DE ++L
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
EM G+ + Y LI +A + + A+ + +M +G+
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGF-FQARECDNAQIVFKQMVSDGV 462
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 3/326 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
I N +I N AL LF + + PN TY+ I+ L + + AS +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M++ + P+ ++ K K+ EA +Y ++++ P + + + L+ +
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD- 375
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
+ A M + + + Y +++ C+ K V +L +M G +
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I G+ + E A + K + S G+ PD+ TY++++ G N G++E A + E +++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
Y+ ++ G CK + ++ L + GV+ +V Y ++ C K + E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK-EE 554
Query: 519 AEKLQAEMKENG-LYLKGVTRALIRA 543
A+ L EMKE G L G LIRA
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 137/354 (38%), Gaps = 42/354 (11%)
Query: 225 IFYFSQLGNGKAALELFD-------KFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
I FS+L + A + FD + + N TY I R S A +V
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
KM+ PD + +L C G ++ +A ++ +VE G P + N L+ L N
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 338 ----------------------------------GTVPLALEMLKDIPGDMRKHAIKPYL 363
G + LAL +LK + + + Y
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
++ ALC K+V A L +M G P +N +I G A ++ + R
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
+ P+V T++ ++ + G++ A K+ +E K Y SL+ G+C ++ DEA
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
+ M +V Y+ LI+ C KA + +L EM + GL VT
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFC-KAKRVDEGMELFREMSQRGLVGNTVT 433
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPGNA 395
+ LAL +L M K +P + + +L C + A L+ M+ G P +
Sbjct: 132 LSLALAVL----AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
FN +I G + +AV ++ + +G +PD+ TY ++V+G G+++ A +L++
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
++ V+Y++++ C + ++AL L TEM + G+R +V Y+ LI+ LC
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGR 306
Query: 516 WETAEKLQAEMKENGLYLKGVT-RALIRA-VKE 546
W A +L ++M E + VT ALI A VKE
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 1/268 (0%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + G A +L+D+ P+ TY I H D A + + M+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ ++ CK K+V E +++ + ++G + L+ ++ A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF-FQARECDNA 450
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
+ K + D I Y ++ LC V A + + + P +N +I G
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
K G++ ++ L +G+KP+V TY ++SG+ G E A + E K+ +
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y++L+R + + + +L+ EM+
Sbjct: 571 SGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 1/221 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F + +ELF + V N TY I ++ D+A V ++M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD +L LC KV+ A V++ + P + + N ++ + + G V
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC-KAGKVE 518
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
++ + K + Y ++ CR A L +M GP P + +N +I
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
+ + G+ + E+++ + S D T ++ + +G
Sbjct: 579 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 378 AKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVS 437
A L DM+ + P P F+ +++ +K+ + + + + +++ G+ ++YTY+++++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 438 GYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
+ ++ A +L + K V +SL+ G+C + +A+ L+ +M + G +
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 498 SVDEYDKLIQSL--------CLKAMDWETAEKLQAEMKE-----NGLYLKGVTRALIRAV 544
++ LI L + +D + Q ++ NGL +G + +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 545 KEMENEAVEP 554
K+ME +EP
Sbjct: 245 KKMEQGKIEP 254
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 146/326 (44%), Gaps = 3/326 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
I N +I + + AL LF + E PN TY I L + + AS +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M++ + P+ ++ K K EA +Y ++++ P + + N LV +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD- 379
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
+ A +M + + + Y +++ C+ K V +L +M G +
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I G G+ A ++ K + S G+ PD+ TY++++ G N G++E A ++ + +K+
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
L +Y +++ G CK + D+ L + GV+ +V Y+ +I LC K + +
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL-LQE 558
Query: 519 AEKLQAEMKENG-LYLKGVTRALIRA 543
A L +MKE+G L G LIRA
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 128/291 (43%), Gaps = 1/291 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
NKL+ +++ + L +K + + V TY+ I R S A ++ KM+
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
P + +L C GK++ +A A+ +VE G P + L+ L N
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+ ++ + + + Y VV LC+ D A L+ M A +FN +
Sbjct: 208 E-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I K + A+ + K +E++G++P+V TY+ ++S + G A ++L + +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+ V +++L+ + K +F EA KL +M + + Y+ L+ C+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 127/284 (44%), Gaps = 12/284 (4%)
Query: 269 FDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNF 328
D A + M+ ++ +P + +L + K KK ++ + + + + N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 329 LVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILD 384
L+ + LAL +L G M K +P + + +L C K + A L+
Sbjct: 126 LINCFC-RRSQISLALALL----GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
M+ G P F +I G + +AV ++ + RG +P++ TY V+V+G G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 445 MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDK 504
+ A +L + + V++++++ CK D+AL L EM+ G+R +V Y
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 505 LIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRA-VKE 546
LI LC W A +L ++M E + VT ALI A VKE
Sbjct: 301 LISCLCSYGR-WSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 119/271 (43%), Gaps = 1/271 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI F + G A +L+D P+ TY+ + H D A + + M+
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD ++ CK K+V++ +++ + +G + L+ L + +G
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL-FHDGDC 451
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A ++ K + D I Y ++ LC + A ++ M + ++ +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I G K G++ ++ L +G+KP+V TY ++SG + ++ A +L++ K++
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
+ + Y++L+R + + + +L+ EM+
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 144/338 (42%), Gaps = 35/338 (10%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
+ + G + A+ +F++ +F+ C P +Y+ + L FD A V +M D PD
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN---------- 337
+ CK + A + + +G + + +VG EN
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 338 ----GTVPLALEMLKDI------PGDMR----------KHAIKP----YLAVVRALCRVK 373
V L L + GD++ K + P Y ++ LC+
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 374 DVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYA 433
++ A +++ +I GP P +N +I G K + +A + + + GL+PD YTY
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 434 VIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS 493
+++GY GG ++ A +I+ +A N V Y SL+ G C + + AL L E
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 494 GVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G++ +V Y+ LI+ L + M E A+ L EM E GL
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQ-LANEMSEKGL 422
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ TY+ I L ++S F A KM++ PD ++ CKG V+ A +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
V G P + L+ L +E G AL + + G K + Y +++ L
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHE-GETNRALALFNEALGKGIKPNVILYNTLIKGLS 402
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ A QL +M G P FN ++ G K+G + A ++K++ S+G PD++
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
T+ +++ GYS +ME A +IL+ N Y+SL+ G CK +F++ ++ M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 491 KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
+ G ++ ++ L++SLC + + A L EMK + VT
Sbjct: 523 VEKGCAPNLFTFNILLESLC-RYRKLDEALGLLEEMKNKSVNPDAVT 568
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 138/328 (42%), Gaps = 45/328 (13%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G AL LF++ PN Y+ I+ L + A+ ++ +M + IP+ +
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV----GKLAYENGTVPLALEML 347
++ LCK V +A + K ++ KG +P + + N L+ +L EN ALE+L
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN-----ALEIL 484
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
+ + + Y +++ LC+ + M+ G P FN ++ +
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI---LEEAKKNHS---- 460
++ +A+ +++ ++++ + PD T+ ++ G+ G+++ A + +EEA K S
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604
Query: 461 ---------------------------VLSP--VMYHSLVRGYCKMEQFDEALKLLTEMK 491
L P Y +V G+CK + K L EM
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 492 DSGVRISVDEYDKLIQSLCLKAMDWETA 519
++G S+ ++I LC++ +E A
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 1/283 (0%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F + AAL L + C N Y + Y + + KML +
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLC 215
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
+L LCK VKE + V+++G P + + N + L + G + A+ M+
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC-QRGELDGAVRMV 274
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
+ K + Y ++ LC+ A+ + M+ G P + +N +I GY K
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G + A ++ G PD +TY ++ G + GE A + EA + ++Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
++L++G EA +L EM + G+ V ++ L+ LC
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 18/254 (7%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ T++ I ++A + MLD PD +L LCK K ++
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
YK +VEKG P + + N L+ L + AL +L++ M+ ++ P + ++
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYR-KLDEALGLLEE----MKNKSVNPDAVTFGTLI 573
Query: 367 RALCRVKDVGAAKQLILDM-----IANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
C+ D+ A L M +++ P +N +I +++ + A ++ + +
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTP----TYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
R L PD YTY ++V G+ G + K L E +N + S ++ C ++
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 482 EALKLLTEMKDSGV 495
EA ++ M G+
Sbjct: 690 EAAGIIHRMVQKGL 703
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Query: 316 EKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP-YLAVVRALCRVKD 374
E G +S+ ++ KL Y G E+L D+ ++ H ++ Y+ ++ R
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYY-GKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGK 91
Query: 375 VGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAV 434
V A + M P +N +++ G QA ++ + RG+ PDVY++ +
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 435 IVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
+ + AA ++L ++ V Y ++V G+ + E +L +M SG
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 495 VRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
V + + ++KL++ LC K D + EKL ++ + G+
Sbjct: 212 VSLCLSTFNKLLRVLCKKG-DVKECEKLLDKVIKRGV 247
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 10/281 (3%)
Query: 235 KAALELFDKFEFFQCVPNAETYHFTIQALYR-HSLFDSASSVSQKMLDAQSIPDEEKVGD 293
KAA +L + + CV + + + R H FDS V KM D P ++
Sbjct: 68 KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLR-VFHKMKDFDCDPSQKAYVT 126
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
+L L + ++ A YK + E G P ++S+N L+ L +GTV L++ ++P
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP-- 184
Query: 354 MRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
K P Y ++ LCR + AK+L +M+ P + +I G
Sbjct: 185 --KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+ +A+ ++ ++S+G++P+V+TY+ ++ G G A ++ E + V Y +
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
L+ G CK ++ EA++LL M G++ Y K+I C
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 20/304 (6%)
Query: 251 PNAETYHFTIQALYRH-SLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
P + + I+AL R+ D+ + +M PD G ++ LC+ ++ EA
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAV 365
++ +VEK P + + L+ L + V A+ L++ M+ I+P Y ++
Sbjct: 214 LFTEMVEKDCAPTVVTYTSLINGLC-GSKNVDEAMRYLEE----MKSKGIEPNVFTYSSL 268
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ LC+ A +L M+A G P + +ITG K ++ +AVE++ + +GL
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY-------HSLVRGYCKME 478
KPD Y ++SG+ + A L+E + + + + +VRG C
Sbjct: 329 KPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA-N 387
Query: 479 QFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG-LYLKGVT 537
A L M+ G+ + V+ + L++ LC K +++ A +L E+ +G + KG
Sbjct: 388 YPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKG-EFQKAVQLVDEIVTDGCIPSKGTW 446
Query: 538 RALI 541
+ LI
Sbjct: 447 KLLI 450
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 360 KPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV-GEMGQAVEMMK 418
K Y+ V+ L + A + +M G PP A N +I + G + +++
Sbjct: 122 KAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFL 181
Query: 419 LLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
+ RG PD YTY ++SG G ++ A+K+ E + + V Y SL+ G C +
Sbjct: 182 EMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSK 241
Query: 479 QFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
DEA++ L EMK G+ +V Y L+ LC + E + M
Sbjct: 242 NVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 15/258 (5%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI + G A +LF + C P TY I L D A ++M
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ ++ LCK + +A +++ ++ +G P M + L+ L E + A
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQ-KIQEA 316
Query: 344 LEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+E+L M +KP Y V+ C + A + +MI G P +N
Sbjct: 317 VELLD----RMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Query: 400 VITGYSKV------GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
+ ++V +A + + SRG+ +V T +V GE + A ++++
Sbjct: 373 HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Query: 454 EAKKNHSVLSPVMYHSLV 471
E + + S + L+
Sbjct: 433 EIVTDGCIPSKGTWKLLI 450
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 3/310 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
NK++ + +LGN + A + K P+ TY I + DSA V +M
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+E ++ LC +++ EA ++ + + +P + + L+ L
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE 341
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
AL ++K++ K I Y ++ +LC A++L+ M+ G P +N +I
Sbjct: 342 -ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
GY K G + AV++++L+ESR L P+ TY ++ GY + A +L + + +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL 459
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
V Y+SL+ G C+ FD A +LL+ M D G+ Y +I SLC K+ E A
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC-KSKRVEEACD 518
Query: 522 LQAEMKENGL 531
L +++ G+
Sbjct: 519 LFDSLEQKGV 528
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 134/295 (45%), Gaps = 3/295 (1%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A++LF K + +C P TY I++L A ++ ++M + P+ ++
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
LC K ++A + ++EKG P + + N L+ + G + A+++++ +
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC-KRGMIEDAVDVVELMESRKLS 425
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ Y +++ C+ +V A ++ M+ P +N +I G + G A +
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ L+ RGL PD +TY ++ +E A + + ++ + VMY +L+ GYCK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+ DEA +L +M + ++ LI LC + A L+ +M + GL
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG-KLKEATLLEEKMVKIGL 598
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 14/246 (5%)
Query: 297 WLCKGKKVKEAHAVYK------AVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDI 350
W+ + + K H+VY ++ G + + L+ K G L++ + +
Sbjct: 112 WISQNPRYK--HSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKM 169
Query: 351 PGDMR-----KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
D R K I Y ++ +L R V KQ+ ++M+ + P +N ++ GY
Sbjct: 170 NKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYC 229
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
K+G + +A + + + GL PD +TY ++ GY ++++A K+ E + V
Sbjct: 230 KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEV 289
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAE 525
Y L+ G C + DEA+ L +MKD +V Y LI+SLC E A L E
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE-ALNLVKE 348
Query: 526 MKENGL 531
M+E G+
Sbjct: 349 MEETGI 354
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 8/291 (2%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N+LI + + N A+ + +K + +P+ TY+ I R FDSA + M D
Sbjct: 432 NELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD+ ++ LCK K+V+EA ++ ++ +KG P + L+ + G V
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC-KAGKVD 549
Query: 342 LALEMLKDIPGDMRKHAIKPYL---AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
A ML+ + + K+ + L A++ LC + A L M+ G P +
Sbjct: 550 EAHLMLEKM---LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I K G+ A + + S G KPD +TY + Y G + A ++ + ++N
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
Y SL++GY + Q + A +L M+D+G S + LI+ L
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 119/256 (46%), Gaps = 3/256 (1%)
Query: 256 YHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVV 315
Y+ + +L R L D V +ML+ + P+ ++ CK V+EA+ +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 316 EKGKYPPMSSVNFLVGKLAY-ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKD 374
E G P + L+ + Y + + A ++ ++P + Y ++ LC +
Sbjct: 246 EAGLDPDFFTYTSLI--MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 375 VGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAV 434
+ A L + M + P + +I +A+ ++K +E G+KP+++TY V
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 435 IVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
++ + + E AR++L + + + + + Y++L+ GYCK ++A+ ++ M+
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 495 VRISVDEYDKLIQSLC 510
+ + Y++LI+ C
Sbjct: 424 LSPNTRTYNELIKGYC 439
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 38/330 (11%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
AL L + E PN TY I +L F+ A + +ML+ +P+ ++
Sbjct: 342 ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
CK +++A V + + + P + N L+ Y V A+ +L +
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK--GYCKSNVHKAMGVLNKMLERKVL 459
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ Y +++ CR + +A +L+ M G P + +I K + +A ++
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC- 475
LE +G+ P+V Y ++ GY G+++ A +LE+ + + + + +++L+ G C
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 476 ----------------------------------KMEQFDEALKLLTEMKDSGVRISVDE 501
K FD A +M SG +
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 502 YDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
Y IQ+ C + + AE + A+M+ENG+
Sbjct: 640 YTTFIQTYCREGRLLD-AEDMMAKMRENGV 668
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 5/315 (1%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
I N LI + G+ +L D CVPN TY+ I L D A S+ ++
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M+ ++ IP++ G ++ L K ++ +A + ++ E+G + + L+ L ++ G
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL-FKEG 376
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
A+ + + + K I Y +V LCR AK+++ MIA+G P ++
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYS 436
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
++ G+ K G +AV++ K ++ G + + Y+V++ G G ++ A + +
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM---KDSGVRISVDEYDKLIQSLCLKAMD 515
V Y S+++G C + D ALKL EM ++ + V Y+ L+ LC++ D
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQK-D 555
Query: 516 WETAEKLQAEMKENG 530
A L M + G
Sbjct: 556 ISRAVDLLNSMLDRG 570
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 123/280 (43%), Gaps = 13/280 (4%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+E+F +C+P+ TY + L + D A + +M P ++
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML------KDI 350
LCK + + + KG P + N L+ L + G + A+ +L K I
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK-GKLDKAVSLLERMVSSKCI 324
Query: 351 PGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
P D+ Y ++ L + + A +L+ M G +++ +I+G K G+
Sbjct: 325 PNDV------TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSL 470
+A+ + + + +G KP++ Y+V+V G G+ A++IL + + + Y SL
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
++G+ K +EA+++ EM +G + Y LI LC
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 112/273 (41%), Gaps = 36/273 (13%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN +++ I+AL + D A V + M + + +PD ++ LCK +++ EA +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+ +G P P+ +L D LC
Sbjct: 245 LDEMQSEGCSPS------------------PVIYNVLID------------------GLC 268
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ D+ +L+ +M G P +N +I G G++ +AV +++ + S P+
Sbjct: 269 KKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
TY +++G A ++L ++ L+ +Y L+ G K + +EA+ L +M
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Query: 491 KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ 523
+ G + ++ Y L+ LC + E E L
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Query: 343 ALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
A+E+ + +P Y ++ LC+ + + A L+ +M + G P ++N +I
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVL 462
G K G++ + +++ + +G P+ TY ++ G G+++ A +LE + +
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 463 SPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKL 522
+ V Y +L+ G K + +A++LL+ M++ G ++ Y LI L K E A L
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL-FKEGKAEEAMSL 384
Query: 523 QAEMKENG 530
+M E G
Sbjct: 385 WRKMAEKG 392
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 95/231 (41%), Gaps = 13/231 (5%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G + A+ L+ K C PN Y + L R + A + +M+ + +P+
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ K +EA V+K + + G + L+ L G + M+ +
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC---GVGRVKEAMM--VW 490
Query: 352 GDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPP---PGNAVFNFVITGY 404
M IKP Y ++++ LC + + AA +L +M+ P P +N ++ G
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 405 SKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYS-NGGEMEAARKILEE 454
++ +AV+++ + RG PDV T ++ S + R LEE
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 148/320 (46%), Gaps = 10/320 (3%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI + + GN + + ++ ++ + P+ T++ ++ L++ + + A +V ++M D
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD + +K + A VY+ V+ G + + L+ L E
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG---- 368
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
+E ++I G + P Y ++ CR D+ A+ I M G P + +
Sbjct: 369 -KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N +I + ++GEM A + + ++ +G+ P V TY +++ GY E + IL+E +
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
N ++ + V Y +L+ CK + EA + +M+D GV V Y+ LI C K E
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG-KIE 546
Query: 518 TAEKLQAEMKENGLYLKGVT 537
A + EM + G+ L VT
Sbjct: 547 DAFRFSKEMLKKGIELNLVT 566
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 7/279 (2%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
VPN Y+ I R A + M PD ++ C+ +++ A
Sbjct: 386 VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLA--YENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
+ KG P + + N L+G YE ++LK++ + + Y ++
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYE---FDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
LC+ + A+ + DM G P ++N +I G G++ A K + +G++
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
++ TY ++ G S G++ A +L E + Y+SL+ GY + L
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
EMK SG++ ++ Y LI SLC K E E+L EM
Sbjct: 623 EEMKRSGIKPTLKTYHLLI-SLCTKE-GIELTERLFGEM 659
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 8/249 (3%)
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL---AYENGTVPL 342
P + + +L L K K+ + V+ ++E P F+ GK A + V
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS----KFMYGKAIQAAVKLSDVGK 197
Query: 343 ALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
LE+ + D ++ Y ++ LC+ K + A+QL +M+A P +N +I
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVL 462
GY K G ++ ++ + +++ ++P + T+ ++ G G +E A +L+E K V
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 463 SPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKL 522
+ L GY E+ + AL + DSGV+++ L+ +LC K E AE++
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC-KEGKIEKAEEI 376
Query: 523 QAEMKENGL 531
GL
Sbjct: 377 LGREMAKGL 385
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 57/343 (16%)
Query: 243 KFEFFQC------------VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEK 290
K+EF +C +PN +Y I L + S A V + M D P
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 291 VGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDI 350
++ C K+++A K +++KG + + N L+ L+ G + A ++L +I
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM-TGKLSEAEDLLLEI 590
Query: 351 PG-------------------------------DMRKHAIKPYLA---VVRALCRVKDVG 376
+M++ IKP L ++ +LC + +
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIE 650
Query: 377 AAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIV 436
++L +M P V+N V+ Y+ G+M +A + K + + + D TY ++
Sbjct: 651 LTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Query: 437 SGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
G G++ R +++E Y+ +V+G+C+++ + A EM++ G
Sbjct: 708 LGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Query: 497 ISVDEYDKLIQSLCLKAMDWET--AEKLQAEMKENGLYLKGVT 537
+ V ++L+ L +W + AE + +EM NG L VT
Sbjct: 768 LDVCIGNELVSGL---KEEWRSKEAEIVISEM--NGRMLGDVT 805
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 1/287 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
+K++ ++ N + LF E + +Y+ I L R S F A SV KM+
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD V ++ C+G +V +A + + E G P + N ++ + + G V
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG-SCKIGLV 190
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+E+ + D + Y ++V LC A +L+ DM+ P F V
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I + K G+ +A+++ + + R + PDV+TY +++G G ++ A+++L+
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQ 507
+ V Y++L+ G+CK ++ DE KL EM G+ Y+ +IQ
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 5/313 (1%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
I N +I ++G A+ELFD+ E +A TY+ + L + A+ + +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M+ +P+ ++ K K EA +Y+ + + P + + N L+ L +G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM-HG 293
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
V A +ML + + Y ++ C+ K V +L +M G +N
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I GY + G A E+ ++SR P++ TY++++ G +E A + E +K+
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
L Y+ ++ G CK+ ++A L + G++ V Y +I C K W+
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKR-QWDK 469
Query: 519 AEKLQAEMKENGL 531
++ L +M+E+GL
Sbjct: 470 SDLLYRKMQEDGL 482
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 9/238 (3%)
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
KM+ ++ +P +L + K K +++ + G + S N ++ L +
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPG 393
V +AL ++ G M K +P + V +L C+ V A L+ M G P
Sbjct: 119 RFV-IALSVV----GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
++N +I G K+G + AVE+ +E G++ D TY +V+G G A +++
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+ V + + + +++ + K +F EA+KL EM V V Y+ LI LC+
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PNA TY I S F SA ++M + +P++ ++ CK KV EA +
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
Y+++V++G + L+ L ++N V A E+ +++ G + Y ++
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGL-FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
++ ++ A + +M+ G P ++N ++ G+ + GE+ +A E++ + +GL P+
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
TY I+ GY G++ A ++ +E K V +Y +LV G C++ + A+ +
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 491 KDSGVRISVDEYDKLIQ 507
K G S ++ LI
Sbjct: 759 K-KGCASSTAPFNALIN 774
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 12/288 (4%)
Query: 249 CVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAH 308
C PN Y I+ ++S F A V ++M + PD ++ L K K++ EA
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 309 AVYKAVVEKGKYPPMSSVN-FLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
+ +VE G P + F+ G + E A + +K +MR+ + P +
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYI--EASEFASADKYVK----EMRECGVLPNKVLCT 561
Query: 368 AL----CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
L C+ V A M+ G + ++ G K ++ A E+ + + +
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
G+ PDV++Y V+++G+S G M+ A I +E + + ++Y+ L+ G+C+ + ++A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+LL EM G+ + Y +I C K+ D A +L EMK GL
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYC-KSGDLAEAFRLFDEMKLKGL 728
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 22/286 (7%)
Query: 256 YHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVV 315
Y I + + + + A ++ M+ + IP + ++ C+ K V++ Y+ +V
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG---YELLV 406
Query: 316 EKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPG------DMRKHAIKP----YLAV 365
E M N ++ Y GTV + D+ G +M +P Y +
Sbjct: 407 E------MKKRNIVISPYTY--GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
++ + G A +++ +M G P +N +I G SK M +A + + GL
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
KP+ +TY +SGY E +A K ++E ++ + + V+ L+ YCK + EA
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
M D G+ Y L+ L K + AE++ EM+ G+
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGL-FKNDKVDDAEEIFREMRGKGI 623
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 7/244 (2%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI-LGWLCKGKKVKEAHAVYKA 313
TY I L + D+A + +M+ + I + + D + + K +++A A++
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMV-SHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 314 VVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL--AVVRALCR 371
++ G P + L+ E V E+L ++ R I PY VV+ +C
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREK-NVRQGYELLVEMKK--RNIVISPYTYGTVVKGMCS 429
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
D+ A ++ +MIA+G P ++ +I + + G A+ ++K ++ +G+ PD++
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y ++ G S M+ AR L E +N + Y + + GY + +F A K + EM+
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 492 DSGV 495
+ GV
Sbjct: 550 ECGV 553
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y ++ LC++K + AK L+++M + G N ++ +I G K A ++ +
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
S G+ Y Y + S G ME A+ + + + + Y SL+ GYC+ +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG------LYLKG 535
+ +LL EMK + IS Y +++ +C + D + A + EM +G +Y
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMC-SSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 536 VTRAL--------IRAVKEMENEAVEP 554
+ L +R +KEM+ + + P
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 127/300 (42%), Gaps = 44/300 (14%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+A+TY + L+++ D A + ++M PD G ++ K +++A +++
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+VE+G P + N L+G +G + A E+L ++ Y ++ C+
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFC-RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM-------------- 417
D+ A +L +M G P + V+ ++ G ++ ++ +A+ +
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769
Query: 418 ---------------------KLLES---RGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
+L++ R KP+ TY +++ G +EAA+++
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
+ + + + + + Y SL+ GY KM + E + E +G+ E D ++ S+ + A
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI-----EPDHIMYSVIINA 884
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 119/283 (42%), Gaps = 17/283 (6%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I N L+ F + G + A EL D+ PNA TY I + A + +M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+PD ++ C+ V+ A ++ +KG + N L+ ++ G
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALI-NWVFKFGK 781
Query: 340 VPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
L E+L + KP Y ++ LC+ ++ AAK+L M P
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLE---SRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
+ ++ GY K MG+ EM + + + G++PD Y+VI++ + G A ++
Sbjct: 842 TYTSLLNGYDK---MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Query: 453 EEAKKNHSV-----LSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
++ ++V LS +L+ G+ K+ + + A K++ M
Sbjct: 899 DQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 3/318 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSL-FDSASSVSQKM 279
+ LI + + G + A+ +F+ + + PN TY+ I A + + F + +M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
PD +L +G + A ++ + + + S N L+ + + G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC-KGGQ 389
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ LA E+L +P + Y V+ + A L +M G +N
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+++ Y+KVG +A+++++ + S G+K DV TY ++ GY G+ + +K+ E K+ H
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ + + Y +L+ GY K + EA+++ E K +G+R V Y LI +LC + +A
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL-VGSA 568
Query: 520 EKLQAEMKENGLYLKGVT 537
L EM + G+ VT
Sbjct: 569 VSLIDEMTKEGISPNVVT 586
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 9/279 (3%)
Query: 235 KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI 294
K + FD+ + P+ T++ + R L+++A ++ +M + + D +
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDM 354
L +CKG ++ A + + K P + S + ++ A + G AL + G+M
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA-KAGRFDEALNLF----GEM 435
Query: 355 RKHAIK----PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
R I Y ++ +V A ++ +M + G +N ++ GY K G+
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSL 470
+ ++ ++ + P++ TY+ ++ GYS GG + A +I E K V+Y +L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ CK A+ L+ EM G+ +V Y+ +I +
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF--VITGYSKVGEMGQAVEMMKLLE 421
A++ L R V AK++ A G GN V+ F +I+ Y + G +A+ + ++
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGY--GNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 422 SRGLKPDVYTYAVIVSGYSNGG-EMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQF 480
GL+P++ TY ++ GG E + K +E ++N + ++SL+ + +
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 481 DEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
+ A L EM + + V Y+ L+ ++C K + A ++ A+M
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAIC-KGGQMDLAFEILAQM 400
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 115/263 (43%), Gaps = 1/263 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N L+ S+ G +AA LFD+ + + +Y+ + A+ + D A + +M
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ +P+ ++ K + EA ++ + G S N L+ + + G
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL-SIYTKVGRS 460
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
AL++L+++ K + Y A++ + K++ +M P ++ +
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I GYSK G +A+E+ + +S GL+ DV Y+ ++ G + +A +++E K
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 461 VLSPVMYHSLVRGYCKMEQFDEA 483
+ V Y+S++ + + D +
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRS 603
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 146/325 (44%), Gaps = 3/325 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I N +I + + AL LF + E PN TY I L + + AS + M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
++ + P+ ++ K K EA ++ ++++ P + + N L+ +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD-R 305
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ A +M + + + Y +++ C+ K V +L +M G +
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I G G+ A ++ K + S G+ PD+ TY++++ G N G++E A ++ + +K+
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
L +Y +++ G CK + D+ L + GV+ +V Y+ +I LC K + + A
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL-LQEA 484
Query: 520 EKLQAEMKENG-LYLKGVTRALIRA 543
L +MKE+G L G LIRA
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 8/294 (2%)
Query: 225 IFYFSQLGNGKAALELFD-------KFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
IF F++L + A ++ FD K + N TY+ I R S A ++
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
KM+ P + +L C GK++ +A A+ +VE G P + L+ L N
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
A+ ++ + + + Y VV LC+ D+ A L+ M A +F
Sbjct: 130 KASE-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N +I K + A+ + K +E++G++P+V TY+ ++S + G A ++L + +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+ V +++L+ + K +F EA KL +M + + Y+ LI C+
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 12/274 (4%)
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M+ ++ +P + +L + K KK ++ + + G + + N L+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC-RRS 59
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPGN 394
+ LAL +L G M K +P + + +L C K + A L+ M+ G P
Sbjct: 60 QISLALALL----GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 115
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
F +I G + +AV ++ + RG +P++ TY V+V+G G+++ A +L +
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 175
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAM 514
+ V++++++ CK D+AL L EM+ G+R +V Y LI LC
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 515 DWETAEKLQAEMKENGLYLKGVT-RALIRA-VKE 546
W A +L ++M E + VT ALI A VKE
Sbjct: 236 -WSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 118/271 (43%), Gaps = 1/271 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI F + G A +L D P+ TY+ I H D A + + M+
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD + ++ CK K+V++ +++ + +G + L+ L + +G
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL-FHDGDC 376
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A ++ K + D I Y ++ LC + A ++ M + ++ +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I G K G++ ++ L +G+KP+V TY ++SG + ++ A +L++ K++
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
+ Y++L+R + + + +L+ EM+
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 149/325 (45%), Gaps = 6/325 (1%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I N +I + + + A++LF + E PN TY+ I L + + AS + M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
L+ + P+ ++ K K+ EA +++ ++++ P + N L+ N
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN-R 378
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ A +M K + I+ Y ++ C+ K V +L +M G +
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I G+ + G+ A + K + S + D+ TY++++ G + G+++ A I + +K+
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
L+ +Y++++ G CK + EA L + ++ V Y+ +I LC K + E A
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQE-A 554
Query: 520 EKLQAEMKENG-LYLKGVTRALIRA 543
+ L +MKE+G L G LIRA
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 135/355 (38%), Gaps = 35/355 (9%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
NKL+ +++ + + L ++ + + TY I R S A +V KM+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN--- 337
PD + +L C K++ +A A+ +VE G P + L+ L N
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 338 -------------------------------GTVPLALEMLKDIPGDMRKHAIKPYLAVV 366
G + LAL +L + K + + ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+LC+ + V A L +M G P +N +I G A ++ + + +
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
P+V T+ ++ + G++ A K+ EE + + Y+ L+ G+C + DEA ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
M ++ Y+ LI C K E +L EM + GL VT I
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFC-KCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 129/296 (43%), Gaps = 13/296 (4%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
T++N L + G+ AL L +K E + N ++ I +L ++ + A + +
Sbjct: 228 TVVNGL----CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M P+ ++ LC + +A + ++EK P + + N L+ E
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 339 TVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
V + + +M + +I P Y ++ C + AKQ+ M++ P
Sbjct: 344 LVEA-----EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
+N +I G+ K + VE+ + + RGL + TY I+ G+ G+ ++A+ + ++
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
N + Y L+ G C + D AL + ++ S + +++ Y+ +I+ +C
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPGNA 395
+ LAL +L M K +P + + +L C K + A L+ M+ G P
Sbjct: 134 LSLALAVL----AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
F +I G + +AV ++ + RG +PD+ TY +V+G G+++ A +L +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
+ + V++++++ CK + A+ L TEM+ G+R +V Y+ LI LC
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC-NYGR 308
Query: 516 WETAEKLQAEMKENGLYLKGVT-RALIRA 543
W A +L + M E + VT ALI A
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDA 337
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 2/235 (0%)
Query: 303 KVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPY 362
KV +A ++ +V+ +P + N L+ +A N L + + + + H + Y
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMN-KFELVISLGEQMQTLGISHDLYTY 121
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
+ CR + A ++ M+ G P + ++ GY + AV ++ +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
G KPD +T+ ++ G + A ++++ + V Y ++V G CK D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
AL LL +M+ + ++ +V ++ +I SLC K E A L EM+ G+ VT
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLC-KYRHVEVAVDLFTEMETKGIRPNVVT 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 111/244 (45%), Gaps = 4/244 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ TY+ I H+ D A + + M+ +P+ + ++ CK K+V++ +
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
++ + ++G + ++ ++ G A + K + + I Y ++ LC
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGF-FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ A + + + ++N +I G K G++G+A + L S +KPDV
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD---LFCSLSIKPDVV 536
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
TY ++SG + ++ A + + K++ ++ + Y++L+R + + +L+ EM
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Query: 491 KDSG 494
+ SG
Sbjct: 597 RSSG 600
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 144/337 (42%), Gaps = 45/337 (13%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A++L D+ C P+ TY+ + + + D A M + P+ IL
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
+C + +A + ++ KG P + + N L+ L G + A+++L+ +P +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC-RKGLLGRAIDILEKMP----Q 372
Query: 357 HAIKP---------------------------------------YLAVVRALCRVKDVGA 377
H +P Y ++ ALC+ V
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 378 AKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVS 437
A +++ + + G P +N VI G +K G+ G+A++++ + ++ LKPD TY+ +V
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 438 GYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
G S G+++ A K E ++ + V ++S++ G CK Q D A+ L M + G +
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 498 SVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLK 534
+ Y LI+ L + M E E L E+ GL K
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLN-ELCNKGLMKK 588
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 141/328 (42%), Gaps = 44/328 (13%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N ++ G K A+E+ D+ C P+ TY I+A R S A + +M D
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEA-------------------HAVYKAVVEKGKY-- 320
PD ++ +CK ++ EA + + +++ G++
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 321 --------------PPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----Y 362
P + + N L+ L G + A+++L+ +P +H +P Y
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLC-RKGLLGRAIDILEKMP----QHGCQPNSLSY 382
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
++ C+ K + A + + M++ G P +N ++T K G++ AVE++ L S
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
+G P + TY ++ G + G+ A K+L+E + + Y SLV G + + DE
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLC 510
A+K E + G+R + ++ ++ LC
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 145/323 (44%), Gaps = 20/323 (6%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F +LG + A ++ + E VP+ TY+ I + ++A SV LD
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV----LDRM 198
Query: 284 SI-PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPL 342
S+ PD IL LC K+K+A V ++++ YP + + L+ ++G V
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGH 257
Query: 343 ALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
A+++L + MR P Y +V +C+ + A + + DM ++G P N
Sbjct: 258 AMKLLDE----MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
++ G A +++ + +G P V T+ ++++ G + A ILE+ ++
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+ + Y+ L+ G+CK ++ D A++ L M G + Y+ ++ +LC +
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 519 AEKLQAEMKENGLYLKGVTRALI 541
E L N L KG + LI
Sbjct: 434 VEIL------NQLSSKGCSPVLI 450
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 359 IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG------- 411
I P ++R CR+ A +++ + +G P +N +I+GY K GE+
Sbjct: 137 IIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD 196
Query: 412 -------------------------QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEME 446
QA+E++ + R PDV TY +++ +
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 447 AARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLI 506
A K+L+E + V Y+ LV G CK + DEA+K L +M SG + +V ++ ++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 507 QSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
+S+C W AEKL A+M G VT
Sbjct: 317 RSMCSTGR-WMDAEKLLADMLRKGFSPSVVT 346
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+R + R ++ + + +M+ +G P +I G+ ++G+ +A +++++LE G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
PDV TY V++SGY GE+ A +L+ + V V Y++++R C + +A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDV---VTYNTILRSLCDSGKLKQAME 225
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+L M V Y LI++ C + A KL EM++ G
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATC-RDSGVGHAMKLLDEMRDRG 269
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 142/313 (45%), Gaps = 3/313 (0%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G+ A LF++ E N TY+ I +D + + + M+ + P+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ K K++EA ++K ++ +G P + L+ EN + A +M+ +
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN-HLDKANQMVDLMV 395
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
I+ + ++ C+ + +L M G +N +I G+ ++G++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A E+ + + SR + P++ TY +++ G + GE E A +I E+ +K+ L +Y+ ++
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G C + D+A L + GV+ V Y+ +I LC K AE L +M+E+G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG-PLSEAELLFRKMEEDGH 574
Query: 532 YLKGVT-RALIRA 543
G T LIRA
Sbjct: 575 APDGWTYNILIRA 587
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 147/322 (45%), Gaps = 16/322 (4%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
+N L+ G A+ L DK + C PNA TY + + + A + +KM
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ D K I+ LCK + A ++ + KG + + N L+G G
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC-NAGRW 314
Query: 341 PLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
++L+ DM K I P + ++ + + + A++L +MI G P
Sbjct: 315 DDGAKLLR----DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+ +I G+ K + +A +M+ L+ S+G P++ T+ ++++GY ++ ++ +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC-----L 511
V V Y++L++G+C++ + + A +L EM V ++ Y L+ LC
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 512 KAMD-WETAEKLQAEMKENGLY 532
KA++ +E EK + E+ + G+Y
Sbjct: 491 KALEIFEKIEKSKMEL-DIGIY 511
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 133/299 (44%), Gaps = 5/299 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN T+ I L A + +M++ PD + ++ LC K EA +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP-GDMRKHAIKPYLAVVRAL 369
+VE G P + ++ + ++G LA+E+L+ + +++ A+K Y ++ L
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMC-KSGQTALAMELLRKMEERNIKLDAVK-YSIIIDGL 273
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C+ + A L +M G +N +I G+ G ++++ + R + P+V
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
T++V++ + G++ A ++ +E + Y SL+ G+CK D+A +++
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRAVKEM 547
M G ++ ++ LI C KA + +L +M G+ VT LI+ E+
Sbjct: 394 MVSKGCDPNIRTFNILINGYC-KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 121/290 (41%), Gaps = 8/290 (2%)
Query: 228 FSQLGNG-------KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
FS L NG ALEL D+ P+ T + + L A + KM+
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ P+ G +L +CK + A + + + E+ + ++ L ++G++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC-KHGSL 279
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A + ++ I Y ++ C +L+ DMI P F+ +
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I + K G++ +A E+ K + RG+ PD TY ++ G+ ++ A ++++
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ ++ L+ GYCK + D+ L+L +M GV Y+ LIQ C
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 1/209 (0%)
Query: 249 CVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAH 308
C PN T++ I + + D + +KM + D ++ C+ K+ A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 309 AVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRA 368
+++ +V + P + + L+ L +NG ALE+ + I + I Y ++
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLC-DNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
+C V A L + G PG +N +I G K G + +A + + +E G PD
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+TY +++ + G+ + K++EE K+
Sbjct: 578 GWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/294 (18%), Positives = 112/294 (38%), Gaps = 36/294 (12%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN T+ I + + A + ++M+ PD ++ CK + +A+ +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+V KG P + + N L+ N + LE+ + + Y +++ C
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKAN-RIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES-------- 422
+ + AK+L +M++ PP + ++ G GE +A+E+ + +E
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 423 ---------------------------RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+G+KP V TY +++ G G + A + +
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+++ Y+ L+R + +++KL+ E+K G + +I L
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 7/239 (2%)
Query: 303 KVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPY 362
K +A +++ ++ P + + L +A + L L + K + H +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIA-KTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
++ CR + + A + +I G P F+ +I G G + +A+E++ +
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
G KPD+ T +V+G G+ A ++++ + + V Y ++ CK Q
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
A++LL +M++ +++ +Y +I LC K + A L EM+ +KG+T +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLC-KHGSLDNAFNLFNEME-----MKGITTNII 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 94/222 (42%), Gaps = 1/222 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI + + LELF K V + TY+ IQ + A + Q+M+
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ P+ +L LC + ++A +++ + + + N ++ + + V
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS-KV 524
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A ++ +P K +K Y ++ LC+ + A+ L M +G P +N +
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
I + G+ ++V++++ L+ G D T +++ S+G
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 10/337 (2%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I N +I + + AL LF + E PN TY I L + + AS + M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
++ + PD ++ K K+ EA +Y +V++ P + + + L+ +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD-R 376
Query: 340 VPLALEMLKDIPGDMRKHA---IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
+ A +M + + + KH + Y +++ C+ K V ++ +M G
Sbjct: 377 LDEAKQMFEFM---VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+N +I G + G+ A E+ K + S G+ P++ TY ++ G G++E A + E +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
++ + Y+ ++ G CK + ++ L + GV+ V Y+ +I C K
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG-SK 552
Query: 517 ETAEKLQAEMKENG-LYLKGVTRALIRA-VKEMENEA 551
E A+ L EMKE+G L G LIRA +++ + EA
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 142/297 (47%), Gaps = 6/297 (2%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ L D+ PN T++ I L+ H+ A ++ +M+ PD G ++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSV--NFLVGKLAYENGTVPLALEMLKDIPGDM 354
LCK A + + E+GK P + + G Y++ + AL + K++
Sbjct: 230 GLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKH--MDDALNLFKEMETKG 286
Query: 355 RKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAV 414
+ + Y +++ LC A +L+ DMI P F+ +I + K G++ +A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 415 EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGY 474
++ + R + P + TY+ +++G+ ++ A+++ E H V Y++L++G+
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 475 CKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
CK ++ +E +++ EM G+ + Y+ LIQ L +A D + A+++ EM +G+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL-FQAGDCDMAQEIFKEMVSDGV 462
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPGNA 395
+PLAL +L G M K +P + + +L C K + A L+ M G P
Sbjct: 132 LPLALAVL----GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
FN +I G + +A+ ++ + ++G +PD+ TY V+V+G G+ + A +L +
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
++ ++Y++++ G CK + D+AL L EM+ G+R +V Y LI LC
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGR 306
Query: 516 WETAEKLQAEMKE 528
W A +L ++M E
Sbjct: 307 WSDASRLLSDMIE 319
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 126/294 (42%), Gaps = 7/294 (2%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
+KL+ +++ + L ++ + N TY I R S A +V KM+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
P+ + +L C K++ EA A+ + G P + N L+ L N
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+ ++ + + + Y VV LC+ D A L+ M PG ++N +
Sbjct: 204 E-AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE---EAKK 457
I G K M A+ + K +E++G++P+V TY+ ++S N G A ++L E K
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
N V + + +L+ + K + EA KL EM + S+ Y LI C+
Sbjct: 323 NPDVFT---FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 8/281 (2%)
Query: 221 LNKLIFYFSQL-------GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSAS 273
+N +F FS L G A +L+D+ P+ TY I H D A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 274 SVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL 333
+ + M+ PD ++ CK K+V+E V++ + ++G + N L+ L
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
++ G +A E+ K++ D I Y ++ LC+ + A + + + P
Sbjct: 442 -FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
+N +I G K G++ ++ L +G+KPDV Y ++SG+ G E A + +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
E K++ ++ + Y++L+R + + + +L+ EM+ G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F + + +E+F + V N TY+ IQ L++ D A + ++M+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ +L LCK K+++A V++ + P + + N ++ + + G V
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC-KAGKVE 518
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
++ ++ K + Y ++ CR A L +M +G P + +N +I
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
+ G+ + E++K + S G D T ++ + +G
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 148/336 (44%), Gaps = 47/336 (13%)
Query: 236 AALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM---------------- 279
+AL LFDK E PN+ T+ I+ ++ + A +KM
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 280 ---LDAQSIPDEEKVGD---------------ILGWLCKGKKVKEAHAVYKAVVEKGKYP 321
L Q + K+ D IL WLCK K EA + + +G P
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 322 PMSSV-NFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVG 376
+ S N ++G +N +++ + + ++ + +KP Y ++ R D
Sbjct: 477 NVVSYNNVMLGHCRQKN------MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530
Query: 377 AAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM-KLLESRGLKPDVYTYAVI 435
A +++ M ++ V+ +I G KVG+ +A E++ ++E + L +Y I
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
+ G+ GEM++A EE N + + Y SL+ G CK + D+AL++ EMK+ GV
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Query: 496 RISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
++ + Y LI C K + E+A L +E+ E GL
Sbjct: 651 KLDIPAYGALIDGFC-KRSNMESASALFSELLEEGL 685
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 2/244 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
I+ K ++ A A Y+ + G P + + L+ L +N + ALEM ++
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC-KNNRMDQALEMRDEMKNK 648
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
K I Y A++ C+ ++ +A L +++ G P ++N +I+G+ +G M A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
+++ K + GL+ D+ TY ++ G G + A ++ E + V ++Y +V G
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG 768
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYL 533
K QF + +K+ EMK + V +V Y+ +I + + + A +L EM + G+
Sbjct: 769 LSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG-HYREGNLDEAFRLHDEMLDKGILP 827
Query: 534 KGVT 537
G T
Sbjct: 828 DGAT 831
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 134/289 (46%), Gaps = 6/289 (2%)
Query: 257 HFTIQALYRHSLFDS----ASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYK 312
+ T Q L R SL + A V + ++ + PD + CK + A+++ +
Sbjct: 233 NVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLR 292
Query: 313 AVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRV 372
+ EK P V + + G + A+ + ++ D + +++ C+
Sbjct: 293 EMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKN 352
Query: 373 KDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTY 432
D+ +A L M GP P + F+ +I + K GEM +A+E K +E GL P V+
Sbjct: 353 NDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHV 412
Query: 433 AVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKD 492
I+ G+ G + E A K+ +E+ + + + + ++++ CK + DEA +LL++M+
Sbjct: 413 HTIIQGWLKGQKHEEALKLFDESFET-GLANVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 493 SGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
G+ +V Y+ ++ C + + + A + + + E GL T +++
Sbjct: 472 RGIGPNVVSYNNVMLGHC-RQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 39/319 (12%)
Query: 249 CVPNAETYHFTIQALYRHSLFDSASSVSQKML-DAQSIPDEEKVGDILGWLCKGKKVKEA 307
CVP+ ETY I A + D A + +ML D S+ I G CK + A
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH-CKNNDLVSA 358
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD------------------ 349
++ + ++G P + + L+ + +NG + ALE K
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLI-EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 350 --IPGDMRKHAIKPY-------LA-------VVRALCRVKDVGAAKQLILDMIANGPPPG 393
+ G + A+K + LA ++ LC+ A +L+ M + G P
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
+N V+ G+ + M A + + +GLKP+ YTY++++ G + + A +++
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM-KDSGVRISVDEYDKLIQSLCLK 512
++ ++ V+Y +++ G CK+ Q +A +LL M ++ + +S Y+ +I K
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF-FK 596
Query: 513 AMDWETAEKLQAEMKENGL 531
+ ++A EM NG+
Sbjct: 597 EGEMDSAVAAYEEMCGNGI 615
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 10/209 (4%)
Query: 349 DIPGDMRKHAIKPYLAVVR----ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGY 404
DI M + + P+ V AL + + AK+L M+A G N ++
Sbjct: 184 DIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRAS 243
Query: 405 SKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK-KNHSVLS 463
+ + +A+E++ RG +PD Y++ V ++ A +L E K K V S
Sbjct: 244 LREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPS 303
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ 523
Y S++ K D+A++L EM G+ ++V LI C K D +A L
Sbjct: 304 QETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC-KNNDLVSALVLF 362
Query: 524 AEMKENGLYLKGVTRALI----RAVKEME 548
+M++ G VT +++ R EME
Sbjct: 363 DKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Query: 298 LCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN-GTVPLALEMLKDIPGDMRK 356
LCK K+++ V EKG YP + + N L+ AY + G + A E++ +PG
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS--AYSSKGLMEEAFELMNAMPGKGFS 302
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ Y V+ LC+ AK++ +M+ +G P + + ++ K G++ + ++
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ SR + PD+ ++ ++S ++ G ++ A K+ + V+Y L++GYC+
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGV 536
A+ L EM G + V Y+ ++ LC + M E A+KL EM E L+
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE-ADKLFNEMTERALFPDSY 481
Query: 537 TRALI 541
T ++
Sbjct: 482 TLTIL 486
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 5/294 (1%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI +S G + A EL + P TY+ I L +H ++ A V +ML
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ PD +L CK V E V+ + + P + + ++ L +G +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS-LFTRSGNLD 392
Query: 342 LALEMLKDI--PGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
AL + G + + I Y +++ CR + A L +M+ G +N
Sbjct: 393 KALMYFNSVKEAGLIPDNVI--YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ G K +G+A ++ + R L PD YT +++ G+ G ++ A ++ ++ K+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
L V Y++L+ G+ K+ D A ++ +M + + Y L+ +LC K
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 133/306 (43%), Gaps = 4/306 (1%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F++ GN AL F+ + +P+ Y IQ R + A ++ +ML D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
IL LCK K + EA ++ + E+ +P ++ L+ + G + A+E+
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC-KLGNLQNAMELF 503
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
+ + + + Y ++ +V D+ AK++ DM++ P ++ ++
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G + +A + + S+ +KP V ++ GY G LE+ V + Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKD--SGVRISVDEYDKLIQSLCLKAMDWETAEKLQAE 525
++L+ G+ + E +A L+ +M++ G+ V Y+ ++ C + + AE + +
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC-RQNQMKEAEVVLRK 682
Query: 526 MKENGL 531
M E G+
Sbjct: 683 MIERGV 688
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 300 KGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAI 359
+ +K++EAH + + KG + + N L+G L G V LA + ++I +
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLV-RIGWVELAWGVYQEISRSGVGINV 235
Query: 360 KPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
+V ALC+ + + + G P +N +I+ YS G M +A E+M
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYCKM 477
+ +G P VYTY +++G G+ E A+++ E + S LSP Y SL+ CK
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR--SGLSPDSTTYRSLLMEACKK 353
Query: 478 EQFDEALKLLTEMKDSGV 495
E K+ ++M+ V
Sbjct: 354 GDVVETEKVFSDMRSRDV 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 3/236 (1%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
L LI +LGN + A+ELF K + + + TY+ + + D+A + M+
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ +P ++ LC + EA V+ ++ K P + N ++ K +G
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI-KGYCRSGNA 601
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMI--ANGPPPGNAVFN 398
L+ + + Y ++ R +++ A L+ M G P +N
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
++ G+ + +M +A +++ + RG+ PD TY +++G+ + + A +I +E
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N +I ++G + A + + + G+ +VYT ++V+ G+ME L + ++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
V Y++L+ Y +EA +L+ M G V Y+ +I LC K +E
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC-KHGKYE 322
Query: 518 TAEKLQAEMKENGL 531
A+++ AEM +GL
Sbjct: 323 RAKEVFAEMLRSGL 336
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI ++G + A L D+ C P+ TY I+AL L D A ++ +M+
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ ++ LC+ K++EA+ V + +V+ +P + + N L+ + VP A
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVP-A 390
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
E+L + K ++ + ++ LCRV A L+ M+ NG P +N +I G
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
+ G M A +++ + ++PD T+ I++ + G+ + A L + L
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 464 PVMYHSLVRGYCKMEQFDEALKLL 487
V +L+ G CK+ + +AL +L
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFIL 534
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 176/448 (39%), Gaps = 71/448 (15%)
Query: 107 DEGKLENVVSLLQRE--DADGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFF 164
DE +V SLL+ + + SL+S + M+ + +I+L+R+ + +RFF
Sbjct: 38 DEVAAHDVASLLKTPNWEKNSSLKSLVSHMNPNVASQ--VISLQRSDN-----DICVRFF 90
Query: 165 RWVWKENS--------SNVTTPVVES----LVHAV-------CSSSVRE--KEFYSLWEL 203
WV K +S + + +V S + HAV CS +E K Y EL
Sbjct: 91 MWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDEL 150
Query: 204 XXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQAL 263
+ L+ ++L G A + + E V Y + AL
Sbjct: 151 REVFGFRLNY-----PCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNAL 205
Query: 264 YRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPM 323
++ ++A K+L + D +L C+G +++A V+ + ++ P
Sbjct: 206 CKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPN 265
Query: 324 SSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLIL 383
S Y ++ LC V + A L
Sbjct: 266 SV-----------------------------------SYSILIHGLCEVGRLEEAFGLKD 290
Query: 384 DMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGG 443
M G P + +I G + +A + + RG KP+V+TY V++ G G
Sbjct: 291 QMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 444 EMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYD 503
++E A + + K+ S + Y++L+ GYCK + A +LLT M+ + +V ++
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFN 410
Query: 504 KLIQSLCLKAMDWETAEKLQAEMKENGL 531
+L++ LC ++ L+ M +NGL
Sbjct: 411 ELMEGLCRVGKPYKAVHLLK-RMLDNGL 437
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 6/254 (2%)
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
P+ ++ LC+ +++EA + + EKG P + L+ L + G + A
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC-DRGLIDKAFN 322
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
+ ++ K + Y ++ LCR + A + M+ + P +N +I GY
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP- 464
K G + A E++ ++E R KP+V T+ ++ G G+ A +L+ N LSP
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG--LSPD 440
Query: 465 -VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ 523
V Y+ L+ G C+ + A KLL+ M + + +I + C K + A
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC-KQGKADVASAFL 499
Query: 524 AEMKENGLYLKGVT 537
M G+ L VT
Sbjct: 500 GLMLRKGISLDEVT 513
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 136/334 (40%), Gaps = 34/334 (10%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI + + G A EL E C PN T++ ++ L R A + ++MLD
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV----VEKGKYPPMSSVNFLVGKLAYEN 337
PD ++ LC+ + A+ + ++ +E + +N + +
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 338 GTVPLALEMLKDIP-----------GDMRKHAIKPYLAVVRALCRVKDVGAAKQL--ILD 384
+ L L + K I G + + L ++ L +++ + L ILD
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 385 MIANGPP-----------------PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
M++ G P + ++ G + G++ + +++L++ G P
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
+VY Y +I++G G +E A K+L + + + V Y +V+GY + D AL+ +
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
M + G ++ Y L+Q L + +E+
Sbjct: 675 RAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 142/313 (45%), Gaps = 3/313 (0%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G+ A LF++ E + Y I+ +D + + + M+ + PD
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ K K++EA ++K ++++G P + L+ EN + A ML +
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN-QLDKANHMLDLMV 379
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
I+ + ++ C+ + +L M G +N +I G+ ++G++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A E+ + + SR ++PD+ +Y +++ G + GE E A +I E+ +K+ L +Y+ ++
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G C + D+A L + GV+ V Y+ +I LC K A+ L +M+E+G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG-SLSEADLLFRKMEEDGH 558
Query: 532 YLKGVT-RALIRA 543
G T LIRA
Sbjct: 559 SPNGCTYNILIRA 571
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 9/306 (2%)
Query: 228 FSQLGNG-------KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
FS L NG ALEL D+ P T + + L + A + +M+
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ P+E G +L +CK + A + + + E+ + ++ L ++G++
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC-KDGSL 263
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A + ++ K I Y ++R C +L+ DMI P F+ +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I + K G++ +A E+ K + RG+ PD TY ++ G+ +++ A +L+
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
+ ++ L+ GYCK D+ L+L +M GV Y+ LIQ C + E A+
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLEVAK 442
Query: 521 KLQAEM 526
+L EM
Sbjct: 443 ELFQEM 448
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
++ C+ +K+ A + +++ G P + + L+ L E G V ALE++ +
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE-GRVSEALELVDRMVEM 171
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
K + A+V LC V A LI M+ G P + V+ K G+ A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
+E+++ +E R +K D Y++I+ G G ++ A + E + ++Y +L+RG
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYL 533
+C ++D+ KLL +M + V + LI +K AE+L EM + G+
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF-VKEGKLREAEELHKEMIQRGISP 350
Query: 534 KGVT 537
VT
Sbjct: 351 DTVT 354
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 16/322 (4%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN L+ G A+ L D+ PN TY ++ + + A + +KM
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ + D K I+ LCK + A ++ + KG + L+ Y G
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA-GRW 298
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRAL--CRVKD--VGAAKQLILDMIANGPPPGNAV 396
++L+ DM K I P + AL C VK+ + A++L +MI G P
Sbjct: 299 DDGAKLLR----DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+ +I G+ K ++ +A M+ L+ S+G P++ T+ ++++GY ++ ++ +
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC-----L 511
V V Y++L++G+C++ + + A +L EM VR + Y L+ LC
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 512 KAMD-WETAEKLQAEMKENGLY 532
KA++ +E EK + E+ + G+Y
Sbjct: 475 KALEIFEKIEKSKMEL-DIGIY 495
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 3/298 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ T+ I L A + +M++ P + ++ LC KV +A +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+VE G + P V K+ ++G LA+E+L+ + K Y ++ LC
Sbjct: 200 IDRMVETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ + A L +M G ++ +I G+ G ++++ + R + PDV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
++ ++ + G++ A ++ +E + V Y SL+ G+CK Q D+A +L M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 491 KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRAVKEM 547
G ++ ++ LI C KA + +L +M G+ VT LI+ E+
Sbjct: 379 VSKGCGPNIRTFNILINGYC-KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 1/209 (0%)
Query: 249 CVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAH 308
C PN T++ I + +L D + +KM + D ++ C+ K++ A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 309 AVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRA 368
+++ +V + P + S L+ L +NG ALE+ + I + I Y ++
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLC-DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
+C V A L + G P +N +I G K G + +A + + +E G P+
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKK 457
TY +++ + G+ + K++EE K+
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 116/277 (41%), Gaps = 3/277 (1%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + G + A EL + P+ TY I + + D A+ + M+
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ ++ CK + + +++ + +G + N L+ E G + +A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLEVA 441
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
E+ +++ + I Y ++ LC + A ++ + + ++N +I G
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
++ A ++ L +G+KPDV TY +++ G G + A + + +++ +
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVD 500
Y+ L+R + ++ KL+ E+K G SVD
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCG--FSVD 596
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
L L++ K + H + ++ CR + + A + +I G P F+ +I
Sbjct: 90 LVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLI 149
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G G + +A+E++ + G KP + T +V+G G++ A +++ +
Sbjct: 150 NGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ 209
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
+ V Y +++ CK Q A++LL +M++ +++ +Y +I LC K + A
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC-KDGSLDNAFN 268
Query: 522 LQAEMKENGL 531
L EM+ G
Sbjct: 269 LFNEMEIKGF 278
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 87/206 (42%), Gaps = 1/206 (0%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
LELF K V + TY+ IQ + A + Q+M+ + PD +L
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
LC + ++A +++ + + + N ++ + + V A ++ +P K
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS-KVDDAWDLFCSLPLKGVK 524
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+K Y ++ LC+ + A L M +G P +N +I + G+ ++ ++
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNG 442
++ ++ G D T ++V S+G
Sbjct: 585 IEEIKRCGFSVDASTVKMVVDMLSDG 610
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 168/425 (39%), Gaps = 56/425 (13%)
Query: 111 LENVVSLLQREDADGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWVWKE 170
+ +VV++++RE E SL+++ L + +FV LR S + LRFF W
Sbjct: 51 INHVVNIVRREIHP---ERSLNSLRLPVTSEFVFRVLRATSRSS---NDSLRFFNWARSN 104
Query: 171 NSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQ 230
S T+ E L ++ S K++ S+W++ L F Q
Sbjct: 105 PSYTPTSMEYEELAKSLAS----HKKYESMWKILKQMKDLSLDISG-----ETLCFIIEQ 155
Query: 231 LG-NGKA--ALELFDKF-EFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIP 286
G NG A+ELF+ + C + Y+ + AL +F A ++ ++M+ P
Sbjct: 156 YGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKP 215
Query: 287 DEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM 346
D+ ++ C K+KEA + +G PP + L
Sbjct: 216 DKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLL----------------- 258
Query: 347 LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
+ L + +AK+++ M G P FN +I SK
Sbjct: 259 -------------------IEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISK 299
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM 466
GE+ +EM GL D+ TY ++ S G+++ A ++L ++ P +
Sbjct: 300 SGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSL 359
Query: 467 YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
Y +++G C+ FD+A ++MK + Y LI ++C + + A EM
Sbjct: 360 YAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI-TMCGRGGKFVDAANYLVEM 418
Query: 527 KENGL 531
E GL
Sbjct: 419 TEMGL 423
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 111/298 (37%), Gaps = 7/298 (2%)
Query: 154 HGLVENLLRFFRWVWKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXX 213
+G V+ + F V K T V SL+HA+C K F+ + L
Sbjct: 159 NGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDV----KMFHGAYALIRRMIRKGLK 214
Query: 214 XXXXXTILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSAS 273
+ L+ + G K A E D+ P A I+ L +SA
Sbjct: 215 PDKRTYAI--LVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 274 SVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL 333
+ KM +PD + ++ + K +V+ +Y + G + + L+ +
Sbjct: 273 EMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAV 332
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
+ + G + A +L + D K Y +++ +CR A DM PP
Sbjct: 333 S-KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPN 391
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
V+ +IT + G+ A + + GL P + ++ G NGG+ + A +I
Sbjct: 392 RPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 14/319 (4%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G AL L +K E + + Y+ I L ++ D A + KM PD
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV---PLALEMLK 348
++ LC + +A + ++EK P + N L+ E V L EM+K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 349 DIPGDMRKHA---IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
KH + Y +++ C+ K V ++ +M G + +I G+
Sbjct: 349 S------KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
+ + A + K + S G+ PD+ TY +++ G N G +E A + E +K L V
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAE 525
Y +++ CK + ++ L + GV+ +V Y ++ C K + E A+ L E
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK-EEADALFVE 521
Query: 526 MKENG-LYLKGVTRALIRA 543
MKE+G L G LIRA
Sbjct: 522 MKEDGPLPNSGTYNTLIRA 540
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 143/351 (40%), Gaps = 45/351 (12%)
Query: 225 IFYFSQLGNGKAALELFD-------KFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
I FS+L + A + FD + + N TY I R S A ++
Sbjct: 75 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILG 134
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
KM+ P + +L C G ++ EA A+ +VE G P + LV L +++
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL-FQH 193
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
A+ +++ + + + Y AV+ LC+ + A L+ M ++
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL----- 452
N +I G K M A ++ +E++G+KPDV+TY ++S N G A ++L
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 453 -------------------------------EEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
E K H V Y++L++G+CK ++ +
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
E +++ EM G+ + Y LI +A D + A+ + +M +G++
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGF-FQARDCDNAQMVFKQMVSDGVH 423
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 350 IPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
I G M K P + + +L C + A L+ M+ G P F ++ G
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
+ + +AV +++ + +G +PD+ TY +++G GE + A +L + +K V
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAE 525
+Y++++ G CK + D+A L +M+ G++ V Y+ LI LC W A +L ++
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC-NYGRWSDASRLLSD 310
Query: 526 MKENGL-----YLKGVTRALIRAVKEMENEAV 552
M E + + + A ++ K +E E +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 130/314 (41%), Gaps = 43/314 (13%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I N +I + + A +LF+K E P+ TY+ I L + + AS + M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVE-KGKYPPMSSVNFLV-GKLAYEN 337
L+ PD ++ K K+ EA +Y +V+ K +P + + N L+ G Y+
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
V +E+ +++ Y ++ + +D A+ + M+++G P +
Sbjct: 372 --VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESR---------------------------------- 423
N ++ G G + A+ + + ++ R
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 424 -GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
G+KP+V TY ++SG+ G E A + E K++ + + Y++L+R ++ DE
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA--RLRDGDE 547
Query: 483 A--LKLLTEMKDSG 494
A +L+ EM+ G
Sbjct: 548 AASAELIKEMRSCG 561
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 1/221 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F + + +E+F + V N TY I ++ D+A V ++M+
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD +L LC V+ A V++ + ++ + + ++ L + G V
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC-KAGKVE 478
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
++ + K + Y ++ CR A L ++M +GP P + +N +I
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
+ G+ + E++K + S G D T+ ++ + +G
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 66/132 (50%)
Query: 378 AKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVS 437
A L DM+ + P P F+ +++ +K+ + + + + +++ G+ ++YTY++ ++
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 438 GYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
+ ++ A IL + K S V +SL+ G+C + EA+ L+ +M + G +
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 498 SVDEYDKLIQSL 509
+ L+ L
Sbjct: 179 DTVTFTTLVHGL 190
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 138/322 (42%), Gaps = 35/322 (10%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDS-ASSVSQKMLDA 282
LI ++++G + A+E F + + F C P+ TY+ ++ + R +F A +V +ML
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 283 QSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVG----------- 331
P+ G ++ L K + +A ++ + +G P + L+
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252
Query: 332 -KLAYE---NGTVP-------------------LALEMLKDIPGDMRKHAIKPYLAVVRA 368
KL YE +G P A E+L+ D ++ Y +++
Sbjct: 253 RKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDG 312
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
L R + A +L +M+ P ++ +I G SK G++ A++++ + S+G+ PD
Sbjct: 313 LFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
Y Y ++ G +E R + E + S + L+ C+ EA ++ T
Sbjct: 373 TYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFT 432
Query: 489 EMKDSGVRISVDEYDKLIQSLC 510
E++ SG SV ++ LI LC
Sbjct: 433 EIEKSGCSPSVATFNALIDGLC 454
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI S+ G + AL+L P+ Y+ I+AL L + S+ +M + +
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
S PD ++ +C+ V+EA ++ + + G P +++ N L+ L ++G + A
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC-KSGELKEA 462
Query: 344 LEMLKDIP-GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIA---NGPPPGNAVFNF 399
+L + G ++ + R+ + + G+ + D+ G P +N
Sbjct: 463 RLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNV 522
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I G+ + G++ A++++ +L+ +GL PD TY +++G G E A K+ K+
Sbjct: 523 LINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDD 580
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKL 486
SP +Y SL+ C+ + A L
Sbjct: 581 FRHSPAVYRSLMTWSCRKRKVLVAFNL 607
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 150/394 (38%), Gaps = 76/394 (19%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ F +LG A EL FE V Y I L+R + A + ML
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVN----FLVGKLAYEN 337
PD ++ L K K+++A + ++ KG P N L G+ E
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 338 G-TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
G ++ L + + P D H I ++ ++CR V A+++ ++ +G P A
Sbjct: 392 GRSLQLEMSETESFP-DACTHTI-----LICSMCRNGLVREAEEIFTEIEKSGCSPSVAT 445
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLE----------------------------------- 421
FN +I G K GE+ +A ++ +E
Sbjct: 446 FNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDL 505
Query: 422 ----SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
G PD+ +Y V+++G+ G+++ A K+L + V Y++L+ G ++
Sbjct: 506 AHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRV 565
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK------------------AMDWETA 519
+ +EA KL D R S Y L+ C K +D ETA
Sbjct: 566 GREEEAFKLFYAKDD--FRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETA 623
Query: 520 EKLQAEMKENGLYLKGVTRALIRAVKEMENEAVE 553
+++ KE G T +R + E++ E
Sbjct: 624 NEIEQCFKE------GETERALRRLIELDTRKDE 651
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 149/331 (45%), Gaps = 10/331 (3%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKF-EFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
+IL +I Y + N A LF+KF + P TY+ I L + + A V
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFL 809
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
++ IPD +L K K+ E +YK + + N ++ L +
Sbjct: 810 QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV-KA 868
Query: 338 GTVPLALEMLKDIPGDMR-KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
G V AL++ D+ D Y ++ L + + AKQL M+ G P A+
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+N +I G+ K GE A + K + G++PD+ TY+V+V G ++ +E K
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 457 KNHSVLSP--VMYHSLVRGYCKMEQFDEALKLLTEMKDS-GVRISVDEYDKLIQSLCLKA 513
+ S L+P V Y+ ++ G K + +EAL L EMK S G+ + Y+ LI +L +
Sbjct: 989 E--SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 514 MDWETAEKLQAEMKENGLYLKGVT-RALIRA 543
M E A K+ E++ GL T ALIR
Sbjct: 1047 M-VEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 123/286 (43%), Gaps = 3/286 (1%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML- 280
N L+ + + G EL+ + +C N T++ I L + D A + ++
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
D P G ++ L K ++ EA +++ +++ G P + N L+ + G
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG-KAGEA 942
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A + K + + + +K Y +V LC V V ++ +G P +N +
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 401 ITGYSKVGEMGQAVEMM-KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
I G K + +A+ + ++ SRG+ PD+YTY ++ G +E A KI E ++
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKL 505
+ +++L+RGY + + A + M G + Y++L
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
I Y+ + G+ +ALE F+K + PN + ++ +L + A + + D
Sbjct: 439 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
+PD ++ K ++ EA + ++E G P + VN L+ L Y+ V A
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL-YKADRVDEA 557
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
+M + K + Y ++ L + + A +L M+ G PP FN +
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
K E+ A++M+ + G PDV+TY I+ G G+++ A + KK ++
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK---LVY 674
Query: 464 P--VMYHSLVRGYCKMEQFDEALKLLT 488
P V +L+ G K ++A K++T
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIIT 701
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 122/280 (43%), Gaps = 2/280 (0%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+ TY ++L A +KM + + + ++ L K + EA VY
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ ++ +G P + + + L+ L + + + +LK++ K + + +R L R
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLG-KRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGR 270
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
+ A +++ M G P + +I ++ A E+ + +++ KPD T
Sbjct: 271 AGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT 330
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y ++ +S+ ++++ ++ E +K+ V V + LV CK F EA L M+
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 492 DSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
D G+ ++ Y+ LI L L+ + A +L M+ G+
Sbjct: 391 DQGILPNLHTYNTLICGL-LRVHRLDDALELFGNMESLGV 429
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 11/291 (3%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
L+ + GN A + D +PN TY+ I L R D A + M
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLA-----YENG 338
P + + K A ++ + KG P + + N + LA E
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
+ L+ + +P + Y +++ +V ++ A +L+ +M+ NG P V N
Sbjct: 489 QIFYGLKDIGLVPDSV------TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I K + +A +M ++ LKP V TY +++G G+++ A ++ E +
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ + +++L CK ++ ALK+L +M D G V Y+ +I L
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 9/265 (3%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
VP+ T+ + AL + F A M D +P+ ++ L + ++ +A
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRA- 368
++ + G P + + +V ALE + M+ I P + A
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS-ALETFEK----MKTKGIAPNIVACNAS 474
Query: 369 ---LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
L + AKQ+ + G P + +N ++ YSKVGE+ +A++++ + G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
+PDV +++ ++ A K+ K+ + V Y++L+ G K + EA++
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLC 510
L M G + ++ L LC
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLC 619
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 121/300 (40%), Gaps = 2/300 (0%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G K A K F V NA +Y+ I L + A V ++M+ P +
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ L K + + + K + G P + + + L G + A E+LK +
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG-RAGKINEAYEILKRMD 285
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
+ + Y ++ ALC + + AK++ M P + ++ +S ++
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
+ +E G PDV T+ ++V G A L+ + + + Y++L+
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G ++ + D+AL+L M+ GV+ + Y I K+ D +A + +MK G+
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG-KSGDSVSALETFEKMKTKGI 464
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 9/259 (3%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
ALELF E P A TY I + SA +KM P+ L
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
L K + +EA ++ + + G P + N ++ K + G + A+++L + M +
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM-KCYSKVGEIDEAIKLLSE----MME 531
Query: 357 HAIKPYLAVVRALC----RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
+ +P + VV +L + V A ++ + M P +N ++ G K G++ +
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVR 472
A+E+ + + +G P+ T+ + E+ A K+L + V Y++++
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 473 GYCKMEQFDEALKLLTEMK 491
G K Q EA+ +MK
Sbjct: 652 GLVKNGQVKEAMCFFHQMK 670
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 147/306 (48%), Gaps = 35/306 (11%)
Query: 278 KMLDAQSIPDEEKVGDI----------LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVN 327
K ++A + D+ + GDI + LC+ ++ A + + + + +P + +
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 328 FLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP--YLAVVRAL--CRVKDVGAAKQLIL 383
LV +NG + +A E + +M + IKP Y RA+ R+ D A +L
Sbjct: 449 TLVKGFV-KNGNLSMATE----VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Query: 384 DMIA-NGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
+M+A + P ++N I G KVG + +A+E + + GL PD TY ++ GY
Sbjct: 504 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN 563
Query: 443 GEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEY 502
G+ + AR + +E + S + Y L+ G+ K + ++A + TEMK GVR +V +
Sbjct: 564 GQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH 623
Query: 503 DKLIQSLCLKAMDWETAEKLQAEMKENGL------YLKGVTR--------ALIRAVKEME 548
+ L+ +C KA + + A + +M+E G+ Y +++ +++ KEM
Sbjct: 624 NALLYGMC-KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEML 682
Query: 549 NEAVEP 554
++ +EP
Sbjct: 683 DKEIEP 688
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 78/146 (53%)
Query: 365 VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
V++ L + + A + MI +G P FN ++ K G++ + ++ ++ R
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
++ TY ++++G+S G+ME AR+ + +++ ++P ++ L+ GYCK FD+A
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLC 510
+ EM ++G+ + Y+ I +LC
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALC 354
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 125/302 (41%), Gaps = 15/302 (4%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
+P+ + ++ L + + AS+V + M++ +P +L K ++
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK--HAIKPYL--AV 365
++ + + + N L+ + +NG +E + GDMR+ A+ PY +
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFS-KNG----KMEEARRFHGDMRRSGFAVTPYSFNPL 314
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ C+ A + +M+ G P + +N I G + A E++ + +
Sbjct: 315 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA--- 371
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
PDV +Y ++ GY G+ A + ++ + S V Y++L+ G C+ + A +
Sbjct: 372 -PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALIRAVK 545
L EM + V Y L++ +K + A ++ EM G+ G RAV
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGF-VKNGNLSMATEVYDEMLRKGIKPDGYAYT-TRAVG 488
Query: 546 EM 547
E+
Sbjct: 489 EL 490
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 79/192 (41%), Gaps = 5/192 (2%)
Query: 299 CKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHA 358
CK +A V ++ G YP S+ N + L + G + A E+L M
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC-DFGRIDDARELL----SSMAAPD 373
Query: 359 IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMK 418
+ Y ++ ++ A L D+ A P +N +I G + G + A + +
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 419 LLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
+ ++ + PDV TY +V G+ G + A ++ +E + Y + G ++
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG 493
Query: 479 QFDEALKLLTEM 490
D+A +L EM
Sbjct: 494 DSDKAFRLHEEM 505
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 129/274 (47%), Gaps = 14/274 (5%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
++ CK + +A V+ + ++ P + S N L+ + G + + +
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC-KVGNLDEGFRLKHQMEKS 304
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ + Y A++ ALC+ + A L +M G P + +F +I G+S+ GE+
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLM 364
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
E + + S+GL+PD+ Y +V+G+ G++ AAR I++ + + Y +L+ G
Sbjct: 365 KESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL--KAMDWETA--EKLQAEMKEN 529
+C+ + AL++ EM +G+ + + L+ +C + +D E A E L+A +K +
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 530 GLYL---------KGVTRALIRAVKEMENEAVEP 554
+ KG + + +KEM+++ P
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 2/318 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ N L+ F + GN A ++FD+ P +++ I + D + +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+++ PD ++ LCK K+ AH ++ + ++G P L+ + NG
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS-RNGE 360
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ L E + + + I Y +V C+ D+ AA+ ++ MI G P +
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I G+ + G++ A+E+ K ++ G++ D ++ +V G G + A + L E +
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
V Y ++ +CK KLL EM+ G SV Y+ L+ LC K + A
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC-KLGQMKNA 539
Query: 520 EKLQAEMKENGLYLKGVT 537
+ L M G+ +T
Sbjct: 540 DMLLDAMLNIGVVPDDIT 557
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 130/291 (44%), Gaps = 9/291 (3%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI + ++GN L + E + P+ TY I AL + + D A + +M
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
IP++ ++ + ++ Y+ ++ KG P + N LV +NG +
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC-KNGDL 396
Query: 341 PLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
A ++I M + ++P Y ++ CR DV A ++ +M NG
Sbjct: 397 VAA----RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVG 452
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
F+ ++ G K G + A ++ + G+KPD TY +++ + G+ + K+L+E +
Sbjct: 453 FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQ 507
+ V S V Y+ L+ G CK+ Q A LL M + GV Y+ L++
Sbjct: 513 SDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 8/257 (3%)
Query: 225 IFYFSQLGNG-------KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
+F +S L N A LFD+ +PN + I R+ D Q
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
KML PD ++ CK + A + ++ +G P + L+
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC-RG 428
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
G V ALE+ K++ + + + A+V +C+ V A++ + +M+ G P + +
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
++ + K G+ +++K ++S G P V TY V+++G G+M+ A +L+
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 458 NHSVLSPVMYHSLVRGY 474
V + Y++L+ G+
Sbjct: 549 IGVVPDDITYNTLLEGH 565
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 54/291 (18%)
Query: 244 FEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKK 303
F FF+ + + + FT++ + + F +V + +AQS+ + + K
Sbjct: 102 FAFFKFISSQPGFRFTVETYFVLARF---LAVHEMFTEAQSL---------IELVVSRKG 149
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKL--AYEN-GTVPLALEMLKDIPGDMRKHAIK 360
A +V+ ++VE + PM FLV L Y + G +P A++ + RKH
Sbjct: 150 KNSASSVFISLVEM-RVTPMCG--FLVDALMITYTDLGFIPDAIQCFRL----SRKH--- 199
Query: 361 PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLL 420
R ++ G +LD + P G I G+ M++L
Sbjct: 200 ------RFDVPIRGCGN----LLDRMMKLNPTG------TIWGF-----------YMEIL 232
Query: 421 ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQF 480
++ G +VY + ++++ + G + A+K+ +E K + V +++L+ GYCK+
Sbjct: 233 DA-GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 481 DEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
DE +L +M+ S R V Y LI +LC K + A L EM + GL
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALC-KENKMDGAHGLFDEMCKRGL 341
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI +G + ALEL F C P+ TY+ IQ + + + AS + + +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 281 DAQSI-PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
PD ++ CK K++EA ++ ++ G YP + N LV A
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK---- 324
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
A EML A+++ MI+ G P F
Sbjct: 325 ---AGEML-----------------------------TAEEIRGKMISFGCFPDVVTFTS 352
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I GY +VG++ Q + + + +RG+ P+ +TY+++++ N + AR++L +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
+ P MY+ ++ G+CK + +EA ++ EM+ + + LI C+K +E
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 95/241 (39%), Gaps = 9/241 (3%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
+I + + G + A L D P T++ + + +A + KM+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
PD ++ C+ +V + +++ + +G +P + + L+ L EN
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN-----R 397
Query: 344 LEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
L +++ G + I P Y V+ C+ V A ++ +M P F
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I G+ G M +AV + + + G PD T + ++S G + A + + A+K
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQ 517
Query: 460 S 460
S
Sbjct: 518 S 518
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+H+ Y + R+LC+ A Q+ M ++G P N + F+++ +++ G++ A
Sbjct: 100 RHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATA 159
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
+ LL+S ++ +++ +E A K+ +E + S ++ L+RG C
Sbjct: 160 L--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
+ + ++AL+LL M G + Y+ LIQ C K+ + A ++ ++K
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC-KSNELNKASEMFKDVK 268
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI +G + ALEL F C P+ TY+ IQ + + + AS + + +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 281 DAQSI-PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
PD ++ CK K++EA ++ ++ G YP + N LV A
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK---- 324
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
A EML A+++ MI+ G P F
Sbjct: 325 ---AGEML-----------------------------TAEEIRGKMISFGCFPDVVTFTS 352
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I GY +VG++ Q + + + +RG+ P+ +TY+++++ N + AR++L +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
+ P MY+ ++ G+CK + +EA ++ EM+ + + LI C+K +E
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 95/241 (39%), Gaps = 9/241 (3%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
+I + + G + A L D P T++ + + +A + KM+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
PD ++ C+ +V + +++ + +G +P + + L+ L EN
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN-----R 397
Query: 344 LEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
L +++ G + I P Y V+ C+ V A ++ +M P F
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I G+ G M +AV + + + G PD T + ++S G + A + + A+K
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQ 517
Query: 460 S 460
S
Sbjct: 518 S 518
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+H+ Y + R+LC+ A Q+ M ++G P N + F+++ +++ G++ A
Sbjct: 100 RHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATA 159
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
+ LL+S ++ +++ +E A K+ +E + S ++ L+RG C
Sbjct: 160 L--LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
+ + ++AL+LL M G + Y+ LIQ C K+ + A ++ ++K
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC-KSNELNKASEMFKDVK 268
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 131/320 (40%), Gaps = 21/320 (6%)
Query: 225 IFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQS 284
+ YFSQ K E + + ++ I R S A SV KM+
Sbjct: 90 VIYFSQ------------KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY 137
Query: 285 IPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLAL 344
P G +L C ++ +A ++ +V+ G P + N L+ L +NG + +AL
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC-KNGELNIAL 196
Query: 345 EMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGY 404
E+L ++ + Y ++ LC A +++ DM+ P F +I +
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 405 SKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP 464
K G + +A E+ K + + P+ TY I++G G + A+K + +
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 465 VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC--------LKAMDW 516
V Y++L+ G+CK DE +KL M G + Y+ LI C L W
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 517 ETAEKLQAEMKENGLYLKGV 536
+ ++ ++ + + L G+
Sbjct: 377 MVSRRVTPDIITHCILLHGL 396
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 138/313 (44%), Gaps = 2/313 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
+ N LI + G ALEL ++ E + TY+ + L + A+ + +
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M+ PD ++ K + EA +YK +++ P + N ++ L +G
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM-HG 295
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
+ A + + + Y ++ C+ + V +L M G +N
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I GY +VG++ A+++ + SR + PD+ T+ +++ G GE+E+A ++ +++
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+ V Y+ ++ G CK ++ ++A +L + GV+ Y +I LC E
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE- 474
Query: 519 AEKLQAEMKENGL 531
A++L MKE G+
Sbjct: 475 ADELIRRMKEEGI 487
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 350 IPGDMRKHAIKPYL----AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
+ G M K +P + +++ C V +G A L++ M+ +G P V+N +I G
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
K GE+ A+E++ +E +GL DV TY +++G G A ++L + K V
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAE 525
+ +L+ + K DEA +L EM S V + Y+ +I LC+ ++ A+K
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD-AKKTFDL 306
Query: 526 MKENGLYLKGVT 537
M G + VT
Sbjct: 307 MASKGCFPNVVT 318
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 378 AKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVS 437
A L +M+ + P P F ++T + + + + +E G+ D+Y++ +++
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 438 GYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
+ + A +L + K S V + SL+ G+C + + +A L+ M SG
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 498 SVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+V Y+ LI LC K + A +L EM++ GL
Sbjct: 175 NVVVYNTLIDGLC-KNGELNIALELLNEMEKKGL 207
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 154/331 (46%), Gaps = 13/331 (3%)
Query: 186 AVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDKFE 245
+ ++ R+K F+SL L + N +I S+ GN A+++F+K +
Sbjct: 359 TLVTALTRQKHFHSL--LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK 416
Query: 246 FFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL--GWLCKGKK 303
C P A T++ I+ + + +S + ML + + ++ +IL W C +K
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW-CNQRK 475
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL 363
++EA + + G P + + N L A G+ A +M+ IP M + +KP +
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA-RIGSTCTAEDMI--IP-RMLHNKVKPNV 531
Query: 364 ----AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
+V C + A + M G P VFN +I G+ + +M E++ L
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+E G+KPDV T++ +++ +S+ G+M+ +I + + + L +GY + +
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
++A ++L +M+ GVR +V Y ++I C
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 10/286 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ TY + AL R F S S+ K+ PD I+ + + +A +
Sbjct: 352 PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 311 YKAVVEKGKYPPMSSVNFLV---GKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
++ + E G P S+ N L+ GK+ + L ML+D +M + + +V+
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRD---EMLQPNDRTCNILVQ 468
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM--KLLESRGL 425
A C + + A ++ M + G P FN + Y+++G A +M+ ++L ++ +
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK-V 527
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
KP+V T IV+GY G+ME A + K+ + +++SL++G+ + D +
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
++ M++ GV+ V + L+ + D + E++ +M E G+
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWS-SVGDMKRCEEIYTDMLEGGI 632
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
K ++ Y +V AL R K + LI + NG P +FN +I S+ G + QA++
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRG 473
+ + ++ G KP T+ ++ GY G++E + ++L+ ++ +L P + LV+
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE-MLQPNDRTCNILVQA 469
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
+C + +EA ++ +M+ GV+ V ++ L ++
Sbjct: 470 WCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 17/298 (5%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN L+ G A+ L D+ PN TY + + + A + +KM
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLA----YE 336
+ D K I+ LCK + A ++ + KG + + N L+G ++
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 337 NGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPP 392
+G ++L+D M K I P + ++ + + + A QL+ +M+ G P
Sbjct: 316 DGA-----KLLRD----MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 393 GNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
+N +I G+ K + +A++M+ L+ S+G PD+ T+ ++++GY ++ ++
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
E + + V Y++LV+G+C+ + + A KL EM VR + Y L+ LC
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 135/299 (45%), Gaps = 2/299 (0%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G+ A LF++ E + TY+ I +D + + + M+ + P+
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ K K++EA + K ++++G P + N L+ EN + A++M+ +
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN-RLEEAIQMVDLMI 395
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
I + ++ C+ + +L +M G +N ++ G+ + G++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A ++ + + SR ++PD+ +Y +++ G + GE+E A +I + +K+ L +Y ++
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
G C + D+A L + GV++ Y+ +I LC K A+ L +M E G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD-SLSKADILFRKMTEEG 573
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 126/283 (44%), Gaps = 9/283 (3%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G A+EL K E +A Y I L + D+A ++ +M D
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++G C + + + + ++++ P + + + L+ E G + A ++LK+
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE-GKLREADQLLKE-- 358
Query: 352 GDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
M + I P Y +++ C+ + A Q++ MI+ G P FN +I GY K
Sbjct: 359 --MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
+ +E+ + + RG+ + TY +V G+ G++E A+K+ +E V Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
L+ G C + ++AL++ +++ S + + + Y +I +C
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 2/244 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
++ C+ +K+ A + +++ G P N L+ L E V ALE++ +
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE-CRVSEALELVDRMVEM 187
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
K + +V LC V A LI M+ G P + V+ K G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
+E+++ +E R +K D Y++I+ G G ++ A + E + + Y++L+ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYL 533
+C ++D+ KLL +M + +V + LI S +K A++L EM + G+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSF-VKEGKLREADQLLKEMMQRGIAP 366
Query: 534 KGVT 537
+T
Sbjct: 367 NTIT 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 123/327 (37%), Gaps = 44/327 (13%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F G +L + PN T+ I + + A + ++M+
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ ++ CK +++EA + ++ KG P + + N L+ N +
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN-RID 420
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
LE+ +++ Y +V+ C+ + AK+L +M++ P + ++
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA------------- 448
G GE+ +A+E+ +E ++ D+ Y +I+ G N +++ A
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 449 --------------------------RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
RK+ EE H+ + Y+ L+R + +
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEG---HAP-DELTYNILIRAHLGDDDATT 596
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSL 509
A +L+ EMK SG V +I L
Sbjct: 597 AAELIEEMKSSGFPADVSTVKMVINML 623
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 138/328 (42%), Gaps = 44/328 (13%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + G+ +AA LF++ +F VP+ TY+ I + D ++M D
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD ++ CK K+ Y+ + G P + S + LV E G +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE-GMMQ 384
Query: 342 LALEMLKDIPGDMRKHAIKP---------------------------------------Y 362
A++ D MR+ + P Y
Sbjct: 385 QAIKFYVD----MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
A++ LC + + A++L M G P A +N +I G+ K M +A+E++ L+
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
RG+KPD+ Y + G + ++EAA+ ++ E K+ + ++Y +L+ Y K E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLC 510
L LL EMK+ + ++V + LI LC
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 3/230 (1%)
Query: 320 YPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAK 379
+P S N L+ + A + G KD+ G + + Y ++ +C+ DV AA+
Sbjct: 224 FPKTRSCNGLLHRFA-KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 380 QLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGY 439
L +M G P +N +I G+ KVG + V + ++ +PDV TY +++ +
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 440 SNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISV 499
G++ + E K N + V Y +LV +CK +A+K +M+ G+ +
Sbjct: 343 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
Query: 500 DEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRAVKEME 548
Y LI + C K + A +L EM + G+ VT ALI + + E
Sbjct: 403 YTYTSLIDANC-KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 4/263 (1%)
Query: 235 KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI 294
K A ELF K + +PN +Y+ I + D A + ++ PD G
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDM 354
+ LC +K++ A V + E G S + + +++G L +L ++
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECG-IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 355 RKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN--GPPPGNAVFNFVITGYSKVGEMGQ 412
+ + + ++ LC+ K V A + I+N G A+F +I G K ++
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDY-FNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVR 472
A + + + +GL PD Y ++ G G + A + ++ + L + Y SLV
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 473 GYCKMEQFDEALKLLTEMKDSGV 495
G Q +A L EM G+
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGI 714
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 131/327 (40%), Gaps = 36/327 (11%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I N I F + + AL ++ + VPN TY+ I+ + A + + M
Sbjct: 279 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVV-EKGKYPPMSSVN----------- 327
+PD+ I+G+LCK K++ E + K + E G P + N
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398
Query: 328 ---------------FLVGKLAYENGTVPLALE----MLKDIPGDMRKHAIKP-----YL 363
F + KL Y L E KD+ +M P Y
Sbjct: 399 ADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYT 458
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
AVV CR+ +V AK+L+ M +G P + ++ G + G+ +A EMM + E
Sbjct: 459 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 518
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
P+ TY+VI+ G G++ A ++ E PV + L++ C+ + EA
Sbjct: 519 WWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 578
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLC 510
K + E + G I+V + +I C
Sbjct: 579 RKFMEECLNKGCAINVVNFTTVIHGFC 605
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 151/347 (43%), Gaps = 39/347 (11%)
Query: 221 LNKLIFYFSQLGNGKAALEL-----------------------------------FDKFE 245
++++ +S+ G + AL++ ++ +
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 246 FFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVK 305
VPN TY+ I+ + A + + M +PD+ I+G+LCK K++
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 306 EAHAVYKAVV-EKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLA 364
E + K + E G P + N L+ L ++ AL LKD + Y A
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLT-KHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 365 VVRALCRVKDVGAAKQLILDMIANGP-PPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
+V ALC+ + AK LI +M++ G PP + V+ G+ ++GE+ +A ++++++ +
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
G KP+ +Y +++G G+ AR+++ ++++ + + Y ++ G + + EA
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
++ EM G E + L+QSLC E A K E G
Sbjct: 544 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE-ARKFMEECLNKG 589
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 90/182 (49%)
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+H Y +++ L + K ++++++ M G F+ V+ YS+ G++ A++
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
++ L++ G++P++ + + +E A + LE + V + V Y+ ++RGYC
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKG 535
+ + +EA++LL +M G Y ++ LC + E + ++ KE+GL
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQ 383
Query: 536 VT 537
VT
Sbjct: 384 VT 385
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 8/309 (2%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
L+ + G A E+ + E PN+ TY + L R A V ++M+
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAY-ENGTVPL 342
P ++ +L LC+ + EA + + KG ++ VNF + +N +
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG--CAINVVNFTTVIHGFCQNDELDA 612
Query: 343 ALEMLKDIPGDMRKHA-IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
AL +L D+ + KHA + Y +V L + + A +L+ M+ G P + VI
Sbjct: 613 ALSVLDDMYL-INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
Y ++G++ V +++ + SR +Y ++ G++E A +L + + S
Sbjct: 672 HRYCQMGKVDDLVAILEKMISRQKCRTIYNQ--VIEKLCVLGKLEEADTLLGKVLRTASR 729
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
++L+ GY K A K+ M + + V +KL + L LK + A+K
Sbjct: 730 SDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKG-KVDEADK 788
Query: 522 LQAEMKENG 530
L + E G
Sbjct: 789 LMLRLVERG 797
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 116/270 (42%), Gaps = 15/270 (5%)
Query: 248 QCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEA 307
C P+ TY + R D A + Q M P+ +L +C+ K EA
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDI------PGDMRKHAIKP 361
+ E P + + ++ L E G + A ++++++ PG + + +
Sbjct: 509 REMMNMSEEHWWSPNSITYSVIMHGLRRE-GKLSEACDVVREMVLKGFFPGPVEINLL-- 565
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
+++LCR A++ + + + G F VI G+ + E+ A+ ++ +
Sbjct: 566 ----LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
DV+TY +V G + A +++++ +PV Y +++ YC+M + D
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+ + +L +M ++ Y+++I+ LC+
Sbjct: 682 DLVAILEKMISRQKCRTI--YNQVIEKLCV 709
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
PD ++ CK ++ +A V + K P + N ++G L G + LAL+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC-SRGKLDLALK 214
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
+L + D + + Y ++ A V A +L+ +M++ G P +N +I G
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
K G + +A EM++ LE +G +PDV +Y +++ N G+ E K++ + + V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
Y L+ C+ + +EA+ LL MK+ G+ YD LI + C
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 134/299 (44%), Gaps = 1/299 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + G A E+ E C P+ +Y+ ++AL ++ + KM
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ P+ ++ LC+ K++EA + K + EKG P S + L+ E G +
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCRE-GRLD 385
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
+A+E L+ + D I Y V+ LC+ A ++ + G P ++ +N +
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
+ G+ +A+ M+ + S G+ PD TY ++S G ++ A ++L + +
Sbjct: 446 SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
S V Y+ ++ G+CK + ++A+ +L M +G R + Y LI+ + E E
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 143/315 (45%), Gaps = 12/315 (3%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F ++ A + D+ P+ TY+ I +L D A V ++L
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P ++ V EA + ++ +G P M + N ++ + E G V
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE-GMVD 280
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A EM++++ + + Y ++RAL ++L+ M + P ++ +I
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
T + G++ +A+ ++KL++ +GL PD Y+Y +++ + G ++ A + LE + +
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
V Y++++ CK + D+AL++ ++ + G + Y+ + +L W + +K
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL------WSSGDK 454
Query: 522 LQA-----EMKENGL 531
++A EM NG+
Sbjct: 455 IRALHMILEMMSNGI 469
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 2/291 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ KLI F L N A+ + + E F P+ Y+ I + + D A+ V +M
Sbjct: 126 LCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRM 184
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
PD ++G LC K+ A V ++ P + + L+ E G
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG- 243
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
V AL+++ ++ K + Y ++R +C+ V A +++ ++ G P +N
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ G+ + ++M + S P+V TY+++++ G++E A +L+ K+
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
Y L+ +C+ + D A++ L M G + Y+ ++ +LC
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 67/133 (50%)
Query: 382 ILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSN 441
+++++ P +N +I G+ K+ + A ++ + S+ PD TY +++ +
Sbjct: 146 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 442 GGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDE 501
G+++ A K+L + ++ + + Y L+ DEALKL+ EM G++ +
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 502 YDKLIQSLCLKAM 514
Y+ +I+ +C + M
Sbjct: 266 YNTIIRGMCKEGM 278
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 2/295 (0%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
ALE+F E +A TY+ I L + A+ + + M+ + P+ ++
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
K + EA +YK ++ + P + + N L+ +G + A M +
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI-HGCLGDAKYMFDLMVSKGCF 321
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ Y ++ C+ K V +L +M G +N +I GY + G++ A ++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ G+ PD+ TY +++ N G++E A ++E+ +K+ + + Y+ +++G C+
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
++ EA L + GV+ Y +I LC K + E A+KL MKE+G
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE-ADKLCRRMKEDGF 495
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 9/264 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ T + + + F A S+ M +P+ ++ LCK + + A V
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+ + +KG + N L+ L+ +G A +L+ DM K I P + A++
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLS-NSGRWTDAARLLR----DMVKRKIDPNVIFFTALI 261
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+ ++ A+ L +MI P +N +I G+ G +G A M L+ S+G
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
PDV TY +++G+ +E K+ E V Y++L+ GYC+ + + A K+
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 487 LTEMKDSGVRISVDEYDKLIQSLC 510
M D GV + Y+ L+ LC
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLC 405
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 9/247 (3%)
Query: 269 FDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNF 328
FD A S+ +ML ++ IP +L + K K +Y + G + S
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 329 LVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILD 384
L+ L + + G M K +P + + +L C+ A L+
Sbjct: 120 LIHCFCR-----CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
M G P ++N VI G K ++ A+E+ +E +G++ D TY ++SG SN G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 445 MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDK 504
A ++L + K + + + +L+ + K EA L EM V +V Y+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 505 LIQSLCL 511
LI C+
Sbjct: 295 LINGFCI 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 126/311 (40%), Gaps = 8/311 (2%)
Query: 227 YFSQLGNGKAALELFDKFEFF------QCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
Y +L N ++ D F F + +P+ + + + + + FD + KM
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ D ++ C+ ++ A A+ +++ G P + ++ L+ N
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN-RF 165
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+ ++ + G + Y V+ LC+ +D+ A ++ M G +N +
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I+G S G A +++ + R + P+V + ++ + G + AR + +E +
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
V + Y+SL+ G+C +A + M G V Y+ LI C K+ E
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC-KSKRVEDGM 344
Query: 521 KLQAEMKENGL 531
KL EM GL
Sbjct: 345 KLFCEMTYQGL 355
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/261 (18%), Positives = 107/261 (40%), Gaps = 9/261 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN + I + A ++ ++M+ +P+ ++ C + +A +
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLA----YENGTVPLALEMLKDIPGDMRKHAIKPYLAVV 366
+ +V KG +P + + N L+ E+G + + GD Y ++
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF-----TYNTLI 366
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
C+ + A+++ M+ G P +N ++ G++ +A+ M++ L+ +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
D+ TY +I+ G +++ A + + + Y +++ G C+ EA KL
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 487 LTEMKDSGVRISVDEYDKLIQ 507
MK+ G S YD+ ++
Sbjct: 487 CRRMKEDGFMPSERIYDETLR 507
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 101/251 (40%), Gaps = 1/251 (0%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + GN A L+ + VPN TY+ I H A + M+
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
PD ++ CK K+V++ ++ + +G + N L+ + G + +A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC-QAGKLNVA 378
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
++ + I Y ++ LC + A ++ D+ + +N +I G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
+ ++ +A + + L +G+KPD Y ++SG G A K+ K++ + S
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 464 PVMYHSLVRGY 474
+Y +R +
Sbjct: 499 ERIYDETLRDH 509
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 163/379 (43%), Gaps = 25/379 (6%)
Query: 180 VESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALE 239
V S +CS+ EK F + E+ + +K++ Y + A
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDT------STYSKVLNYLCNASKMELAFL 504
Query: 240 LFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLC 299
LF++ + V + TY + + + L + A +M + P+ ++
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 300 KGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML------KDIPG- 352
K KKV A+ +++ ++ +G P + + + L+ + G V A ++ KD+P
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC-KAGQVEKACQIFERMCGSKDVPDV 623
Query: 353 DM---------RKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
DM + + Y A++ C+ V A++L+ M G P V++ +I G
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
KVG++ +A E+ + G +YTY+ ++ Y + A K+L + +N +
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ 523
V+Y ++ G CK+ + DEA KL+ M++ G + +V Y +I + ET +L
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG-KIETCLELL 802
Query: 524 AEMKENGLYLKGVT-RALI 541
M G+ VT R LI
Sbjct: 803 ERMGSKGVAPNYVTYRVLI 821
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 25/291 (8%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEE------- 289
A ELF+ C+PN TY I + + A + ++M ++ +PD +
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 290 ---------KVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
G +L CK +V+EA + A+ +G P + L+ L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG--- 688
Query: 341 PLALEMLKDIPGDMRKHA----IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
L+ +++ +M +H + Y +++ +VK A +++ M+ N P +
Sbjct: 689 --KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+ +I G KVG+ +A ++M+++E +G +P+V TY ++ G+ G++E ++LE
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQ 507
+ V Y L+ CK D A LL EMK + Y K+I+
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 857
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 150/383 (39%), Gaps = 27/383 (7%)
Query: 160 LLRFFRWVWKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXT 219
++ FF W ++ T PV +LV + VR+ + E
Sbjct: 148 VISFFVWAGRQIGYKHTAPVYNALVDLI----VRDDDEKVPEEFLQQIRDDDKEVFGE-- 201
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
LN L+ + G+ ALE + + F+ P+ TY+ IQA + DSAS + ++M
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
A D + LCK K +EA +VE + P + KL +G
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREA----LTLVETENFVPDT---VFYTKLI--SGL 312
Query: 340 VPLAL-EMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
+L E D MR + P Y ++ K +G K+++ M+ G P
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYS------NGGEMEAA 448
+FN ++ Y G+ A +++K + G P Y +++ N ++ A
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 432
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
K E VL+ + S R C ++++A ++ EM G Y K++
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 509 LCLKAMDWETAEKLQAEMKENGL 531
LC A E A L EMK GL
Sbjct: 493 LC-NASKMELAFLLFEEMKRGGL 514
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 11/260 (4%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
TY I ++ D AS V KML+ P+ +++ LCK K EA+ + + +
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKD 374
EKG P + + ++ G + LE+L+ + Y ++ C+
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGM-IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829
Query: 375 VGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG---LKPDVYT 431
+ A L+ +M P A + VI G++K + +E + LL+ G P +
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-----EFIESLGLLDEIGQDDTAPFLSV 884
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV--MYHSLVRGYCKMEQFDEALKLLTE 489
Y +++ +E A ++LEE + L Y+SL+ C + + A +L +E
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 490 MKDSGVRISVDEYDKLIQSL 509
M GV + + LI+ L
Sbjct: 945 MTKKGVIPEMQSFCSLIKGL 964
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P + +I+G + +A++ + + + P+V TY+ ++ G N ++ +++
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC- 510
L SP +++SLV YC A KLL +M G Y+ LI S+C
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 511 ----LKAMDWETAEKLQAEMKENGLYLKGV-----TRALIRAVK 545
L + AEK +EM G+ L + TR L A K
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 9/311 (2%)
Query: 222 NKLIFYFSQLGNG-KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N ++ F ++G L +K + P+A TY+ I R SL A+ V ++M
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
A D+ +L K + KEA V +V G P + + N L+ A +G +
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA-RDGML 365
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+E+ + K + Y ++ R V +A + +M G P FN
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 401 ITGYSKVGEMGQAVEMMKLLESR---GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
I Y G G+ EMMK+ + GL PD+ T+ +++ + G + +E K+
Sbjct: 426 IKMY---GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
V +++L+ Y + F++A+ + M D+GV + Y+ ++ +L M WE
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM-WE 541
Query: 518 TAEKLQAEMKE 528
+EK+ AEM++
Sbjct: 542 QSEKVLAEMED 552
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 138/325 (42%), Gaps = 38/325 (11%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ F Q G +F + + VP ET++ I A R F+ A +V ++MLD
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG--- 338
A PD +L L +G +++ V A +E G+ P + + + AY NG
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVL-AEMEDGRCKP-NELTYCSLLHAYANGKEI 575
Query: 339 -----------------------TVPLALEMLKDIP------GDMRKHAIKPYLAVVRAL 369
T+ L +P ++++ P + + ++
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 370 C----RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
R + V A ++ M G P A +N ++ +S+ + G++ E+++ + ++G+
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
KPD+ +Y ++ Y M A +I E + + V + Y++ + Y F+EA+
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLC 510
++ M G R + + Y+ ++ C
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDGYC 780
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 132/309 (42%), Gaps = 38/309 (12%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSL-FDSASSVSQKMLDA 282
LI F+ G + A+ +F K E C P TY+ + + ++ +S+ +KM
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 283 QSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPL 342
PD ++ +G +EA V++ M + F K+ Y
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEE---------MKAAGFSYDKVTYN------ 318
Query: 343 ALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
L D+ G + H K + V+ +M+ NG P +N +I+
Sbjct: 319 ---ALLDVYG--KSHRPKEAMKVLN----------------EMVLNGFSPSIVTYNSLIS 357
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVL 462
Y++ G + +A+E+ + +G KPDV+TY ++SG+ G++E+A I EE +
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 463 SPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKL 522
+ +++ ++ Y +F E +K+ E+ G+ + ++ L+ MD E +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 523 QAEMKENGL 531
+ EMK G
Sbjct: 478 K-EMKRAGF 485
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 57/314 (18%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI +S+ G+ + A+ ++ + P+ TY+ + AL R +++ + V +M
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHA----VYKAVVE-------------------- 316
D + P+E +L GK++ H+ VY V+E
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 317 -----------KGKYPPMSSVNFLVG------KLAYENGTVPLALEMLKDIPGDMRKHAI 359
+G P ++++N +V +A NG + M++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY-----------MKERGF 660
Query: 360 KPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
P +A +L R D G +++++ +++A G P +N VI Y + M A
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
+ + + G+ PDV TY + Y+ E A ++ K+ + Y+S+V GYC
Sbjct: 721 IFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Query: 476 KMEQFDEALKLLTE 489
K+ + DEA KL E
Sbjct: 781 KLNRKDEA-KLFVE 793
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 136/317 (42%), Gaps = 16/317 (5%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ + + K A+++ ++ P+ TY+ I A R + D A + +M +
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ PD +L + KV+ A ++++ + G P + + N + K+ G
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI-KMYGNRGKF- 435
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQ----LILDMIANGPPPGNAVF 397
EM+K I ++ + P + L V + +M G P F
Sbjct: 436 --TEMMK-IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N +I+ YS+ G QA+ + + + G+ PD+ TY +++ + GG E + K+L E +
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL---CLKAM 514
+ + Y SL+ Y ++ + L E SGV ++ L+++L C K
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIG-LMHSLAEEVYSGV---IEPRAVLLKTLVLVCSKCD 608
Query: 515 DWETAEKLQAEMKENGL 531
AE+ +E+KE G
Sbjct: 609 LLPEAERAFSELKERGF 625
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
N+V +I+ K G + A M L+ G DVY+Y ++S ++N G A + +
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK 232
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKM-EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
+ +++ + + Y+ ++ + KM +++ L+ +MK G+ Y+ LI + C +
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKR 291
Query: 513 AMDWETAEKLQAEMKENGLYLKGVT 537
+ A ++ EMK G VT
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVT 316
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 13/305 (4%)
Query: 256 YHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVV 315
Y + L +S+ +K+ + IPD + L KG + E ++ V
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 316 EKGKYPPMSSVNFLVGKL----AYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+G P + LV L + G LK + D ++ Y AV+ LC+
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGD-----RYLKQMGVDGLLSSVYSYNAVIDCLCK 437
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
+ + A + +M G P FN ++GYS G++ + +++ L G KPDV T
Sbjct: 438 ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVIT 497
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
+++I++ E++ A +E + + + Y+ L+R C D ++KL +MK
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK 557
Query: 492 DSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRA-LIRAVKE--ME 548
++G+ + Y+ IQS C K + AE+L M GL T + LI+A+ E E
Sbjct: 558 ENGLSPDLYAYNATIQSFC-KMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRE 616
Query: 549 NEAVE 553
+EA E
Sbjct: 617 SEARE 621
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN T++ + V +K+L PD I+ LC+ K++K+A
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+K ++E G P + N L+ + G ++++ M+++ + P Y A +
Sbjct: 518 FKEMLEWGIEPNEITYNILI-RSCCSTGDTDRSVKLF----AKMKENGLSPDLYAYNATI 572
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
++ C+++ V A++L+ M+ G P N ++ +I S+ G +A EM +E G
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Query: 427 PDVYTYAVI 435
PD YT ++
Sbjct: 633 PDSYTKRLV 641
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 126/318 (39%), Gaps = 22/318 (6%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI + +LG K ++F + F P+ Y+ I AL + + D A Q+M
Sbjct: 151 LIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDG 210
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
PD ++ +CK V EA + K + ++G P + + L+ G V A
Sbjct: 211 CKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIA-GRVDEA 269
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRAL----------CRVKDVGAAKQLILDMIANGPPPG 393
L+ L+ MR + P A +R C+ +V ++ +N G
Sbjct: 270 LKQLE----MMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVG---FMEKDSNLQRVG 322
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
+ ++ S E GQ ++ + RG PD T+ +S G ++ +I +
Sbjct: 323 YDAVLYCLSNNSMAKETGQ---FLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFD 379
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
Y LV+ ++F E + L +M G+ SV Y+ +I LC KA
Sbjct: 380 GFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC-KA 438
Query: 514 MDWETAEKLQAEMKENGL 531
E A EM++ G+
Sbjct: 439 RRIENAAMFLTEMQDRGI 456
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 11/212 (5%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL-GWLCKGKKVKEAHAVYKA 313
+Y+ I L + ++A+ +M D P+ L G+ +G VK+ H V +
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD-VKKVHGVLEK 485
Query: 314 VVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRAL 369
++ G P + + + ++ L + A + K+ M + I+P Y ++R+
Sbjct: 486 LLVHGFKPDVITFSLIINCLCRAK-EIKDAFDCFKE----MLEWGIEPNEITYNILIRSC 540
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C D + +L M NG P +N I + K+ ++ +A E++K + GLKPD
Sbjct: 541 CSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDN 600
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
+TY+ ++ S G AR++ +++ V
Sbjct: 601 FTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%)
Query: 320 YPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAK 379
Y S+ ++G + G + L++E+LK+I + + + ++ + R+
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCN 165
Query: 380 QLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGY 439
+ + G P ++N VI K + A + + S G KPD +TY +++ G
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 440 SNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
G ++ A +++++ ++ + + Y L+ G+ + DEALK L M+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMR 277
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 128/290 (44%), Gaps = 5/290 (1%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F +LG + L ++ K + P TY+F + L DSA V + M
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ PD ++ CK + ++A + + +G + ++ + Y +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI-QACYADSDFG 309
Query: 342 LALEMLKDIPGDMRKHAIKP--YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ + +++ D + + P + V+ LC+ + + +MI G P A++
Sbjct: 310 SCVALYQEM--DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I GY+K G + A+ ++ + G KPDV TY+V+V+G G +E A + +
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
++ + Y SL+ G K + DEA +L EM + G Y+ LI +
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 177/437 (40%), Gaps = 61/437 (13%)
Query: 155 GLVENLLRFFRWVWKENSSNVTTP-------VVESLVHAVCSSSVREKEFYSLWELXXXX 207
G+VE LL WVW++ N P ++ LV A+ S E+ F +
Sbjct: 201 GMVEELL----WVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA-ERVFEVM------- 248
Query: 208 XXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHS 267
N +I + + G + A+E E + TY IQA Y S
Sbjct: 249 --ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 268 LFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVN 327
F S ++ Q+M + ++G LCK K+ E + V++ ++ KG P ++
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 328 FLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC---RVKD---------- 374
L+ A ++G+V A+ +L + + K + Y VV LC RV++
Sbjct: 367 VLIDGYA-KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF 425
Query: 375 ----------------------VGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
V A++L +M G + +N +I ++K ++ +
Sbjct: 426 DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 485
Query: 413 AVEMMKLLESR-GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A+ + K +E G VYTY +++SG E A K+ + + + +L
Sbjct: 486 AIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALS 545
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G C + A K+L E+ GV + D +I +LC KA + A KL + E G
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAACED-MINTLC-KAGRIKEACKLADGITERGR 603
Query: 532 YLKGVTRA-LIRAVKEM 547
+ G R +I A++++
Sbjct: 604 EVPGRIRTVMINALRKV 620
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 2/280 (0%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
N ++ I L H +FDSA +ML P + ++ LCK K +A ++
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ KG + N L+ L E G + A + K+I G Y ++ C
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLC-EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
K + A + +M+ G P N ++ +I G + ++ +A++ + G+ PDVYT
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y+V++ G E ++ +E + + V+Y+ L+R YC+ + AL+L +MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 492 DSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G+ + Y LI+ + + + E A+ L EM+ GL
Sbjct: 673 HKGISPNSATYTSLIKGMSIIS-RVEEAKLLFEEMRMEGL 711
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ TY I L+ + + A +PD ++ CK ++ +E
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+ ++ K P N L+ + +G + +ALE+ +D M+ I P Y +++
Sbjct: 633 FDEMMSKNVQPNTVVYNHLI-RAYCRSGRLSMALELRED----MKHKGISPNSATYTSLI 687
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+ + + V AK L +M G P + +I GY K+G+M + +++ + S+ +
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
P+ TY V++ GY+ G + A ++L E ++ V + Y + GY K EA K
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG 807
Query: 487 LTEMKDSGVRISVDEYDKLIQ 507
E + + ++ ++KLIQ
Sbjct: 808 SDEENYAAI---IEGWNKLIQ 825
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ T + + +L R + F + S PD + CKG KV+EA +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+ + E G P + + N ++ L G A M K+ M + ++P Y +V
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGM-CGRYDEAF-MFKE---KMVERGMEPTLITYSILV 337
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+ L R K +G A ++ +M G PP V+N +I + + G + +A+E+ L+ S+GL
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
TY ++ GY G+ + A ++L+E ++ + S++ C FD AL+
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 487 LTEMKDSGVRISVDEYDKLIQSLC 510
+ EM + LI LC
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLC 481
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 34/310 (10%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+L LI + G ALEL+ +F V + T + + L D A + +++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL------ 333
L + D ++ C KK+ EA +V++G P + + L+ L
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 334 ---------AYENGTVPLALEMLKDIPG---------------DMRKHAIKP----YLAV 365
NG +P I G +M ++P Y +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+RA CR + A +L DM G P +A + +I G S + + +A + + + GL
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
+P+V+ Y ++ GY G+M +L E + + + Y ++ GY + EA +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 486 LLTEMKDSGV 495
LL EM++ G+
Sbjct: 772 LLNEMREKGI 781
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 140/339 (41%), Gaps = 37/339 (10%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F + G + A++LF K E PN T++ I L +D A +KM++ P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM- 346
++ L + K++ +A+ V K + +KG P + N L+ E G++ A+E+
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI-EAGSLNKAIEIK 388
Query: 347 ----------------------LKDIPGDMRKHAIKPYL------------AVVRALCRV 372
K+ D + +K L +V+ LC
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 373 KDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTY 432
+A + + +M+ PG + +I+G K G+ +A+E+ ++G D T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 433 AVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKD 492
++ G G+++ A +I +E V+ V Y++L+ G C ++ DEA L EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 493 SGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G++ Y LI L E A + + K NG+
Sbjct: 569 RGLKPDNYTYSILICGL-FNMNKVEEAIQFWDDCKRNGM 606
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 20/276 (7%)
Query: 268 LFDSASSVSQKMLDAQSIPDEE---KVGDILGWL-C---KGKKVKEAHAVYKAVVEKGKY 320
L DS +++ M DEE K+ D+L + C K A V+ + KG +
Sbjct: 164 LRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMF 223
Query: 321 PPMSSVNFLVGKLAYENGTVPLALEMLKDIPG-DMRKHAIKP----YLAVVRALCRVKDV 375
P ++ N L+ L N E K D+ + P + + A C+ V
Sbjct: 224 PSKTTCNILLTSLVRAN-------EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 276
Query: 376 GAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVI 435
A +L M G P FN VI G G +A + + RG++P + TY+++
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
V G + + A +L+E K + ++Y++L+ + + ++A+++ M G+
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 496 RISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
++ Y+ LI+ C K + AE+L EM G
Sbjct: 397 SLTSSTYNTLIKGYC-KNGQADNAERLLKEMLSIGF 431
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 2/280 (0%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
N ++ I L H +FDSA +ML P + ++ LCK K +A ++
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ KG + N L+ L E G + A + K+I G Y ++ C
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLC-EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
K + A + +M+ G P N ++ +I G + ++ +A++ + G+ PDVYT
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y+V++ G E ++ +E + + V+Y+ L+R YC+ + AL+L +MK
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 492 DSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G+ + Y LI+ + + + E A+ L EM+ GL
Sbjct: 673 HKGISPNSATYTSLIKGMSIIS-RVEEAKLLFEEMRMEGL 711
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ TY I L+ + + A +PD ++ CK ++ +E
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+ ++ K P N L+ + +G + +ALE+ +D M+ I P Y +++
Sbjct: 633 FDEMMSKNVQPNTVVYNHLI-RAYCRSGRLSMALELRED----MKHKGISPNSATYTSLI 687
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+ + + V AK L +M G P + +I GY K+G+M + +++ + S+ +
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
P+ TY V++ GY+ G + A ++L E ++ V + Y + GY K EA K
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG 807
Query: 487 LTEMKDSGVRISVDEYDKLIQ 507
E + + ++ ++KLIQ
Sbjct: 808 SDEENYAAI---IEGWNKLIQ 825
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ T + + +L R + F + S PD + CKG KV+EA +
Sbjct: 224 PSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS-PDVYLFTTAINAFCKGGKVEEAVKL 282
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+ + E G P + + N ++ L G A M K+ M + ++P Y +V
Sbjct: 283 FSKMEEAGVAPNVVTFNTVIDGLGM-CGRYDEAF-MFKE---KMVERGMEPTLITYSILV 337
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+ L R K +G A ++ +M G PP V+N +I + + G + +A+E+ L+ S+GL
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
TY ++ GY G+ + A ++L+E ++ + S++ C FD AL+
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 487 LTEMKDSGVRISVDEYDKLIQSLC 510
+ EM + LI LC
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLC 481
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 34/310 (10%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+L LI + G ALEL+ +F V + T + + L D A + +++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL------ 333
L + D ++ C KK+ EA +V++G P + + L+ L
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 334 ---------AYENGTVPLALEMLKDIPG---------------DMRKHAIKP----YLAV 365
NG +P I G +M ++P Y +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+RA CR + A +L DM G P +A + +I G S + + +A + + + GL
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
+P+V+ Y ++ GY G+M +L E + + + Y ++ GY + EA +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 486 LLTEMKDSGV 495
LL EM++ G+
Sbjct: 772 LLNEMREKGI 781
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 140/339 (41%), Gaps = 37/339 (10%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F + G + A++LF K E PN T++ I L +D A +KM++ P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM- 346
++ L + K++ +A+ V K + +KG P + N L+ E G++ A+E+
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI-EAGSLNKAIEIK 388
Query: 347 ----------------------LKDIPGDMRKHAIKPYL------------AVVRALCRV 372
K+ D + +K L +V+ LC
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 373 KDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTY 432
+A + + +M+ PG + +I+G K G+ +A+E+ ++G D T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 433 AVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKD 492
++ G G+++ A +I +E V+ V Y++L+ G C ++ DEA L EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 493 SGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G++ Y LI L E A + + K NG+
Sbjct: 569 RGLKPDNYTYSILICGL-FNMNKVEEAIQFWDDCKRNGM 606
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 20/276 (7%)
Query: 268 LFDSASSVSQKMLDAQSIPDEE---KVGDILGWL-C---KGKKVKEAHAVYKAVVEKGKY 320
L DS +++ M DEE K+ D+L + C K A V+ + KG +
Sbjct: 164 LRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMF 223
Query: 321 PPMSSVNFLVGKLAYENGTVPLALEMLKDIPG-DMRKHAIKP----YLAVVRALCRVKDV 375
P ++ N L+ L N E K D+ + P + + A C+ V
Sbjct: 224 PSKTTCNILLTSLVRAN-------EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 276
Query: 376 GAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVI 435
A +L M G P FN VI G G +A + + RG++P + TY+++
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
V G + + A +L+E K + ++Y++L+ + + ++A+++ M G+
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 496 RISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
++ Y+ LI+ C K + AE+L EM G
Sbjct: 397 SLTSSTYNTLIKGYC-KNGQADNAERLLKEMLSIGF 431
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 13/288 (4%)
Query: 266 HSL-FDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMS 324
HS+ D A + M+ ++ +P + +L + K KK ++ + + G +
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 325 SVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQ 380
+ N L+ + LAL +L G M K +P + + +L C K + A
Sbjct: 122 TYNILINCFC-RRSQISLALALL----GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 381 LILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYS 440
L+ M+ G P F +I G + +AV ++ + RG +P++ TY V+V+G
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 441 NGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVD 500
G+++ A +L + + + V+Y +++ CK D+AL L TEM++ GVR +V
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 501 EYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRA-VKE 546
Y LI LC W A +L ++M E + VT ALI A VKE
Sbjct: 297 TYSSLISCLC-NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 137/303 (45%), Gaps = 16/303 (5%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ L D+ P+ T+ I L+ H+ A ++ +M+ P+ G ++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 297 WLCKGKKVKEAHAVY---KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
LCK + A + +A + S+V + K +E+ + L EM
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM------- 286
Query: 354 MRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
++P Y +++ LC + A +L+ DMI P FN +I + K G+
Sbjct: 287 -ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+ +A ++ + R + PD++TY+ +++G+ ++ A+ + E + V Y++
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
L+ G+CK ++ DE ++L EM G+ + Y LI +A D + A+ + +M +
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF-FQARDCDNAQMVFKQMVSD 464
Query: 530 GLY 532
G++
Sbjct: 465 GVH 467
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 127/294 (43%), Gaps = 2/294 (0%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
AL LF + E PN TY I L + + AS + M++ + P+ ++
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
K K+ EA +Y ++++ P + + + L+ + + A M + +
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD-RLDEAKHMFELMISKDCF 397
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ Y ++ C+ K + +L +M G + +I G+ + + A +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
K + S G+ P++ TY ++ G G++E A + E +++ + Y+ ++ G CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+ ++ L + GV+ V Y+ +I C K + E A+ L +M+E+G
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK-EEADALFRKMREDG 570
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 111/274 (40%), Gaps = 36/274 (13%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI F + G A +L+D+ P+ TY I H D A + + M+
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
P+ ++ CK K++ E +++ + ++G LVG
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG----------LVGNTV------ 436
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
Y ++ + +D A+ + M+++G P +N +
Sbjct: 437 --------------------TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ G K G++ +A+ + + L+ ++P +YTY +++ G G++E +
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
++Y++++ G+C+ +EA L +M++ G
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 8/211 (3%)
Query: 225 IFYFSQLGNGKAALELFDK----FEFF---QCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
IF +S L NG + D+ FE C PN TY+ I + D + +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
+M + + ++ + + A V+K +V G +P + + N L+ L +N
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC-KN 483
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
G + A+ + + + + I Y ++ +C+ V L + G P ++
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
N +I+G+ + G +A + + + G PD
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 41/313 (13%)
Query: 222 NKLIFYFSQLG-NGK--AALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
N LI + +LG NGK A + + PN T++ I ++ + V ++
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
MLD P+ ++ LC G K+ EA ++ +V G P + + N L+ +N
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC-KND 380
Query: 339 TVPLALEMLKDIPG-------------------------------DMRKHAIKP----YL 363
+ AL+M + G +M + I P Y
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
++ LCR ++ AAK+L D + + P F+ ++ GY + GE +A ++K +
Sbjct: 441 CLIAGLCRNGNIEAAKKL-FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV-LSPVMYHSLVRGYCKMEQFDE 482
GLKP TY +++ GY G ++AA + + +K + ++ Y+ L++GY + + ++
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 483 ALKLLTEMKDSGV 495
A LL EM + G+
Sbjct: 560 ANMLLNEMLEKGL 572
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 53/320 (16%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCK---GKKVKEA 307
PN T++ I AL + + A V + M P+ ++ CK K+ +A
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
AV K +VE P +++ N L+ ++ ++PG M+
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDD-----------NLPGSMK------------ 317
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
+ +M+ P +N +I G G++ +A+ M + S G++P
Sbjct: 318 -------------VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
++ TY +++G+ ++ A + K +V + MY+ L+ YCK+ + D+ L
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL-------------YLK 534
EM+ G+ V Y+ LI LC + E A+KL ++ GL K
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNG-NIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRK 483
Query: 535 GVTRALIRAVKEMENEAVEP 554
G +R +KEM ++P
Sbjct: 484 GESRKAAMLLKEMSKMGLKP 503
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F + K AL++F + VP Y+ I A + D ++ ++M
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD ++ LC+ ++ A ++ + KG P + + + L+ + +
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRK 488
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGN-AV 396
A+ +LK+ M K +KP Y V++ C+ ++ AA + M N A
Sbjct: 489 AAM-LLKE----MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVI 435
+N ++ GYS+ G++ A ++ + +GL P+ TY ++
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 9/293 (3%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
KL+ +++ + L D + + T + + + S ASS KM+
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD ++ C G +++EA ++ +VE G P + ++ L +NG V
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC-KNGHV 193
Query: 341 PLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
AL + M + I+P Y ++V LC A L+ M P
Sbjct: 194 NYALSLFDQ----MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
FN +I + K G+ A E+ + + P+++TY +++G+ G ++ AR++ +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
V Y SL+ G+CK ++ D+A+K+ EM G+ + Y LIQ
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 129/284 (45%), Gaps = 5/284 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ T++ I A + F A + +M+ P+ ++ C V EA +
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+ + KG +P + + L+ + V A+++ ++ Y +++
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFC-KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR---GLKP 427
+V A+++ M++ G PP +N ++ G++ +A+ + + ++ R G+ P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
+++TY V++ G G++E A + E+ +K + + Y +++G CK + A+ L
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+ GV+ +V Y +I L + + E A L +MKE+G+
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHE-AHVLFRKMKEDGV 526
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 10/253 (3%)
Query: 266 HSL-FDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMS 324
HSL F+ A + M++++ +P +L + K KK + + G +
Sbjct: 49 HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLY 108
Query: 325 SVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQ 380
+ N L+ ++ LA L G M K +P + +++ C + A
Sbjct: 109 TCNLLMNCFC-QSSQPYLASSFL----GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163
Query: 381 LILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYS 440
++ M+ G P ++ +I K G + A+ + +E+ G++PDV Y +V+G
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 441 NGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVD 500
N G A +L K + +++L+ + K +F +A +L EM + ++
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 501 EYDKLIQSLCLKA 513
Y LI C++
Sbjct: 284 TYTSLINGFCMEG 296
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 131/273 (47%), Gaps = 13/273 (4%)
Query: 246 FFQCVPNAETYHFT----IQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKG 301
F Q V + + F + L R + A S +KML+ + + + +L +
Sbjct: 61 FQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQM 120
Query: 302 KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP 361
+K A V ++++G + + N L+ L N A+ +L++ MR++++ P
Sbjct: 121 RKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC-RNLECGKAVSLLRE----MRRNSLMP 175
Query: 362 ----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
Y V+R C K++ A +L +M +G + +I + K G+M +A+ +
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
K ++ GL+ D+ Y ++ G+ + GE++ + + +E + + Y++L+RG+CK+
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
Q EA ++ M + GVR +V Y LI LC
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 138/299 (46%), Gaps = 7/299 (2%)
Query: 234 GKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGD 293
G AL L F F N ++ ++ L R+ A S+ ++M +PD
Sbjct: 128 GVLALMLKRGFAF-----NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNT 182
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
++ C+GK++++A + + G + + L+ + G + A+ LK++
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC-KAGKMDEAMGFLKEMKFM 241
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ + Y +++R C ++ K L +++ G P +N +I G+ K+G++ +A
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
E+ + + RG++P+VYTY ++ G G+ + A ++L + + V Y+ ++
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
CK +A++++ MK R Y+ L+ LC K D + A KL M ++ Y
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG-DLDEASKLLYLMLKDSSY 419
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 142/318 (44%), Gaps = 20/318 (6%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I F + + ALEL ++ + C + T+ I A + D A ++M
Sbjct: 181 NTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF 240
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
D ++ C ++ A++ V+E+G P + N L+ G
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI------RGFCK 294
Query: 342 LA-LEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
L L+ +I M + ++P Y ++ LC V A QL+ MI P
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+N +I K G + AVE+++L++ R +PD TY +++ G G+++ A K+L
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 457 KNHSVLSP--VMYHSLVRGYCKMEQFDEAL---KLLTEMKDSGVRISVDEYDKLIQSLCL 511
K+ S P + Y++L+ G CK + +AL LL E +G R++ + ++ + L
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN----ILLNSTL 470
Query: 512 KAMDWETAEKLQAEMKEN 529
KA D A +L ++ ++
Sbjct: 471 KAGDVNKAMELWKQISDS 488
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 146/306 (47%), Gaps = 15/306 (4%)
Query: 230 QLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEE 289
+L GKA LFD+ P A TY+ I+ + AS + + M++ P+
Sbjct: 262 ELDRGKA---LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 290 KVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD 349
++ LC K KEA + ++EK + P + N ++ KL ++G V A+E+++
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC-KDGLVADAVEIVEL 377
Query: 350 IPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANG--PPPGNAVFNFVITG 403
M+K +P Y ++ LC D+ A +L+ M+ + P +N +I G
Sbjct: 378 ----MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
K + QA+++ LL + D T ++++ G++ A ++ ++ + V +
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ 523
Y +++ G+CK + A LL +M+ S ++ SV +Y+ L+ SLC K + A +L
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC-KEGSLDQAWRLF 552
Query: 524 AEMKEN 529
EM+ +
Sbjct: 553 EEMQRD 558
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 15/292 (5%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI +G K AL+L + PNA TY+ I L + L A + + M +
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKY--PPMSSVNFLVGKLAYEN---- 337
+ PD +LG LC + EA + +++ Y P + S N L+ L EN
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 338 --GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
L +E L GD I ++ + + DV A +L + + +
Sbjct: 443 ALDIYDLLVEKLG--AGDRVTTNI-----LLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+ +I G+ K G + A ++ + L+P V+ Y ++S G ++ A ++ EE
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQ 507
+++++ V ++ ++ G K A LL M +G+ + Y KLI
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 128/314 (40%), Gaps = 48/314 (15%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSI--PDEEKVGDILGWLCKGKKVKEAH 308
P+ TY+ + L D AS + ML S PD ++ LCK ++ +A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 309 AVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD--------------- 353
+Y +VEK + N L+ + G V A+E+ K I
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNS-TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 354 ----------------MRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
MR ++P Y ++ +LC+ + A +L +M + P
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
FN +I G K G++ A ++ + GL PD++TY+ +++ + G ++ A +
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 454 EA-----KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
+ + + + V+ + + +G + D+ +L+ ++ D + + + ++
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQG-----ETDKLTELVKKLVDKDIVLDKELTCTVMDY 678
Query: 509 LCLKAMDWETAEKL 522
+C + + + A++L
Sbjct: 679 MCNSSANMDLAKRL 692
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 146/345 (42%), Gaps = 24/345 (6%)
Query: 225 IFYFSQLGNGKA-------ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
I F L NG AL +FD+ PN Y+ I L + D+A +
Sbjct: 151 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
+M PD ++ LC + +A + + ++ YP + + N L+ E
Sbjct: 211 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE- 269
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
G V A E +++ I Y ++ LC + A+++ M++ G P +
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+ +I GY K ++ +++ + RG+ + TY +++ GY G++ A +I
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC-----LK 512
+ + Y+ L+ G C + ++AL +L +M+ +G+ + Y+ +I+ +C
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 513 AMDWETAEKLQAEMKEN--------GLYLKGVTR---ALIRAVKE 546
A D + Q M + GLY KG+ R AL R +KE
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 149/356 (41%), Gaps = 37/356 (10%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
++L+ S++ + L+++ + N T + + R S A S KM+
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
P G +L C+G +V +A ++ +V G P + N ++ L ++ V
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC-KSKQV 202
Query: 341 PLALEMLKDIPGD-------------------------------MRKHAIKP----YLAV 365
AL++L + D M K I P + A+
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ A + V A++ +MI P ++ +I G + +A EM + S+G
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
PDV TY+++++GY ++E K+ E + V + V Y L++GYC+ + + A +
Sbjct: 323 FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEE 382
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
+ M GV ++ Y+ L+ LC E A + A+M++NG+ VT +I
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNG-KIEKALVILADMQKNGMDADIVTYNII 437
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 10/299 (3%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
AL+L ++ E P+ TY+ I L + A+ + M + PD ++
Sbjct: 205 ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
K +V EA Y+ ++ + P + + + L+ L + L+ +++ G M
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS-----RLDEAEEMFGFMVS 319
Query: 357 HAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
P Y ++ C+ K V +L +M G + +I GY + G++
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVR 472
A E+ + + G+ P++ TY V++ G + G++E A IL + +KN V Y+ ++R
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 473 GYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G CK + +A + + G+ + Y ++ L K + E A+ L +MKE+G+
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE-ADALFRKMKEDGI 497
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 1/205 (0%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI+ A E+F C P+ TY I + + + +M
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
+ + ++ C+ K+ A +++ +V G +P + + N L+ L +NG + A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC-DNGKIEKA 415
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
L +L D+ + I Y ++R +C+ +V A + + G P + ++ G
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPD 428
K G +A + + ++ G+ P+
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPN 500
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y ++R R + + L M+ P P A F+ +++ SK+ + + + + ++
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
G+ ++ T ++++ + ++ A L + K S V + SL+ G+C+ ++
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+AL + +M G + +V Y+ +I LC K+ + A L M+++G+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLC-KSKQVDNALDLLNRMEKDGI 217
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPGNA 395
+ LAL +L M K +P + + +L C K + A L+ M+ G P
Sbjct: 134 LSLALAVL----AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
F +I G + +AV ++ + RG +PD+ TY +V+G G+++ A +L++
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
+K V+Y++++ G CK + D+AL L TEM + G+R V Y LI LC
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC-NYGR 308
Query: 516 WETAEKLQAEMKENGLYLKGVT-RALIRA-VKE 546
W A +L ++M E + VT ALI A VKE
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 138/298 (46%), Gaps = 6/298 (2%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ L D+ P+ T+ I L+ H+ A ++ +M+ PD G ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSV--NFLVGKLAYENGTVPLALEMLKDIPGDM 354
LCK + A ++ K + EKGK + + G Y++ + AL + ++
Sbjct: 232 GLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKH--MDDALNLFTEMDNKG 288
Query: 355 RKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAV 414
+ + Y +++ LC A +L+ DMI P F+ +I + K G++ +A
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 415 EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGY 474
++ + R + PD++TY+ +++G+ ++ A+ + E + V Y +L++G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 475 CKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
CK ++ +E ++L EM G+ + Y LI +A D + A+ + +M G++
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF-FQARDCDNAQMVFKQMVSVGVH 465
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 1/291 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
NKL+ +++ + + L ++ + + TY I R S A +V KM+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD + +L C K++ +A A+ +VE G P + L+ L N
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+ ++ + + + Y VV LC+ D+ A L+ M ++N +
Sbjct: 206 E-AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I G K M A+ + ++++G++PDV+TY+ ++S N G A ++L + +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+ V + +L+ + K + EA KL EM + + Y LI C+
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 145/334 (43%), Gaps = 4/334 (1%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I N +I + + AL LF + + P+ TY I L + + AS + M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
++ + P+ ++ K K+ EA +Y ++++ P + + + L+ +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD-R 378
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ A M + + + Y +++ C+ K V +L +M G +
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I G+ + + A + K + S G+ P++ TY +++ G G++ A + E +++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
Y+ ++ G CK + ++ +L + GV +V Y+ +I C K E A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG-SKEEA 557
Query: 520 EKLQAEMKENG-LYLKGVTRALIRA-VKEMENEA 551
+ L +MKE+G L G LIRA +++ + EA
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 115/271 (42%), Gaps = 1/271 (0%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + G A +L+D+ P+ TY I H D A + + M+
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ ++ CK K+V+E +++ + ++G + L+ ++ A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF-FQARDCDNA 452
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
+ K + I Y ++ LC+ + A + + + P +N +I G
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
K G++ E+ L +G+ P+V Y ++SG+ G E A +L++ K++ + +
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
Y++L+R + + + +L+ EM+ G
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 1/219 (0%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + + +ELF + V N TY I ++ D+A V ++M+
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ +L LCK K+ +A V++ + P + + N ++ + + G V
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC-KAGKVEDG 522
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
E+ ++ + Y ++ CR A L+ M +GP P + +N +I
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
+ G+ + E++K + S G D T ++ + +G
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 144/323 (44%), Gaps = 3/323 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
++ ++ FS++G A+ + + P++ T + ++ L + A +V +M
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+PD ++ + K++EA ++++G P ++ ++ L ENG
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC-ENGL 267
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
V A+ + + K + + +++ LC+ + A +++ +M+ NG P
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 400 VITGYSKVGEMGQAVEM-MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I G K G +A + +KL+ S KP+V+TY ++ GY ++ A + K+
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+ Y +L+ G+CK F A +L+ M D G ++ Y+ I SLC K+ E
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 519 AEKLQAEMKENGLYLKGVTRALI 541
E L GL GVT ++
Sbjct: 448 YELLNKAF-SCGLEADGVTYTIL 469
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
+P+ T + AL + L + A +KM+D P+ ++ LCK +K+A
Sbjct: 249 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+ + +V G P + + L+ L T LK + D K + Y +++
Sbjct: 309 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 368
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C+ + A+ L M G P + +I G+ K G G+A E+M L+ G P++
Sbjct: 369 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 428
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
YTY + A ++L +A V Y L++ CK ++AL
Sbjct: 429 YTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCR 488
Query: 490 MKDSGVRISVDEYDKLIQSLC 510
M +G + + LI + C
Sbjct: 489 MNKTGFEADMRLNNILIAAFC 509
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 3/246 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN TY I + + A + +M + P+ ++ CK A+ +
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML-KDIPGDMRKHAIKPYLAVVRAL 369
+ ++G P + + N + L + P A E+L K + + Y +++
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLC-KKSRAPEAYELLNKAFSCGLEADGV-TYTILIQEQ 473
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C+ D+ A M G + N +I + + +M ++ + +L+ S GL P
Sbjct: 474 CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTK 533
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
TY ++S Y G+++ A K K++ V Y SL+ G CK DEA KL
Sbjct: 534 ETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 593
Query: 490 MKDSGV 495
M D G+
Sbjct: 594 MIDRGL 599
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 3/311 (0%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSI-PDEEK 290
G+ K A E+ ++ PN T+ I L + + A + K++ + + P+
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT 360
Query: 291 VGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDI 350
++G CK K+ A ++ + E+G +P +++ L+ + G+ A E++ +
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC-KAGSFGRAYELMNLM 419
Query: 351 PGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
+ I Y A + +LC+ A +L+ + G + +I K ++
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSL 470
QA+ + G + D+ ++++ + +M+ + ++ + + + Y S+
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSM 539
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+ YCK D ALK MK G Y LI LC K+M E A KL M + G
Sbjct: 540 ISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDE-ACKLYEAMIDRG 598
Query: 531 LYLKGVTRALI 541
L VTR +
Sbjct: 599 LSPPEVTRVTL 609
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 5/204 (2%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F + K + LF +P ETY I + D A M
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD G ++ LCK V EA +Y+A++++G PP + L + N +
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSAN 621
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A+ +L+ P D +K I+ +VR LC K VG A ++
Sbjct: 622 -AMILLE--PLD-KKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFT 677
Query: 402 TGYSKVGEMGQAVEMMKLLESRGL 425
T S+ G+ ++ + + SRG+
Sbjct: 678 TACSESGKNNLVTDLTERI-SRGV 700
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 14/305 (4%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
TY I L + FD ++ M IPD L LC+ KV A + +
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALC 370
V++G+ P + S L+ L + G V A+E I M + + P A+V LC
Sbjct: 141 VQRGREPDVVSYTILINGL-FRAGKVTDAVE----IWNAMIRSGVSPDNKACAALVVGLC 195
Query: 371 RVKDVGAAKQLILDMIANGPPP-GNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
+ V A +++ + I + V+N +I+G+ K G + +A + + G +PD+
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT- 488
TY V+++ Y + ++ A ++ E ++ L Y+ L++ +C++ D+ +
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK 315
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRAVKEM 547
EM+ G V Y LI++ C +A + A +L EM++ G+ + VT +LI+A
Sbjct: 316 EMEPRGF-CDVVSYSTLIETFC-RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 548 ENEAV 552
N +V
Sbjct: 374 GNSSV 378
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 13/284 (4%)
Query: 256 YHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVV 315
Y I L + + D+A V +M + +G L + + + A A+Y +
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 316 EKG-KYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALC 370
G P + F+ G + +++ + DM P + + LC
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKK------FDLIDALLSDMETLGFIPDIWAFNVYLDLLC 125
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
R VG A Q M+ G P + +I G + G++ AVE+ + G+ PD
Sbjct: 126 RENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSV-LSPVMYHSLVRGYCKMEQFDEALKLLTE 489
A +V G + +++ A +++ E K+ V LS V+Y++L+ G+CK + ++A L +
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY 245
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYL 533
M G + Y+ L+ M + AE + AEM +G+ L
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNM-LKRAEGVMAEMVRSGIQL 288
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 118/297 (39%), Gaps = 1/297 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
+ N LI F + G + A L C P+ TY+ + Y +++ A V +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M+ + D +L C+ + + +E + + S + L+ +
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
T A + +++ + Y ++++A R + AK+L+ M G P +
Sbjct: 341 TRK-AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
++ K G + +A + + + PD +Y ++SG G + A K+ E+ K
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
+ + ++ G + ++ A K+ +M D G + D D LI++ C + D
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMSAD 516
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 108/281 (38%), Gaps = 36/281 (12%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ +Y I L+R A + M+ + PD + ++ LC +KV
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV------ 200
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
LAYE + ++I K + Y A++ C
Sbjct: 201 ---------------------DLAYE--------MVAEEIKSARVKLSTVVYNALISGFC 231
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ + A+ L M G P +N ++ Y + +A +M + G++ D Y
Sbjct: 232 KAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAY 291
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
+Y ++ + + + + + V Y +L+ +C+ +A +L EM
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 491 KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+ G+ ++V Y LI++ L+ + A+KL +M E GL
Sbjct: 352 RQKGMVMNVVTYTSLIKAF-LREGNSSVAKKLLDQMTELGL 391
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 140/302 (46%), Gaps = 6/302 (1%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G + + +L +F P A TY+ I A + F V + M + ++
Sbjct: 238 GEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTY 297
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAY--ENGTVPLALEMLKD 349
++ K K+ +A ++ + E+G S V+ +++ G + A + +
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERG---IESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 350 IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
+ + Y A++ +C+V ++GAA+ L+ +M + G VFN +I GY + G
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+ +A + ++E +G + DV+T I S ++ + A++ L + LS V Y +
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
L+ YCK +EA +L EM GV+ + Y+ +I + C K + A KL+A M+ N
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC-KQGKIKEARKLRANMEAN 533
Query: 530 GL 531
G+
Sbjct: 534 GM 535
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 1/290 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ LI + + GN K A LFD+ P++ TY I + + +A + +M
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+ ++ C+ V EA +Y + +KG + + N +
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ + + G ++ + Y ++ C+ +V AK+L ++M + G P +N
Sbjct: 451 DEAKQWLFRMMEGGVKLSTV-SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I Y K G++ +A ++ +E+ G+ PD YTY ++ G ++ A ++ E
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ V Y ++ G K + DEA L EMK G I Y LI S+
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 4/233 (1%)
Query: 305 KEAHAVYKAVVEKG-KYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL 363
+E V+ +V+KG S + FLV A + + L LE+ + + K +
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVA--AKKRRRIDLCLEIFRRMVDSGVKITVYSLT 228
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
VV LCR +V +K+LI + G P +N +I Y K + ++K+++
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
G+ + TY +++ G+M A K+ +E ++ +Y SL+ C+ A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGV 536
L E+ + G+ S Y LI +C K + AE L EM+ G+ + V
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVC-KVGEMGAAEILMNEMQSKGVNITQV 400
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 21/303 (6%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
LN L+ ++G + +F + ++C P +Y+ I+AL+ S S
Sbjct: 340 FLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 280 LDAQSI-PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPM-----SSVNFLVGKL 333
+ A S+ P E ++ CK +V++A + + + EKG +PP S +N L
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKG-FPPCPAAYCSLINALGKAK 458
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
YE A E+ K++ + + + Y +++ + + A L +M G P
Sbjct: 459 RYE-----AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
+N +++G K G + +A +++ +E G + D+ ++ +I++G++ G A ++ E
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE 573
Query: 454 EAKKNHSVLSP--VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
K HS + P V Y++L+ + F+EA +++ EMKD G EYD + S L
Sbjct: 574 TIK--HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF-----EYDAITYSSIL 626
Query: 512 KAM 514
A+
Sbjct: 627 DAV 629
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 11/312 (3%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI + +LG +A+ LFD+ + P + Y + ++ + A + ++M A
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P +++ L K +V EA+ YK ++ G P + +N L+ L G V
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL----GKVG-R 353
Query: 344 LEMLKDIPGDMRKHAIKP----YLAVVRALCRVK-DVGAAKQLILDMIANGPPPGNAVFN 398
+E L ++ +M P Y V++AL K V M A+ P ++
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I GY K + +A+ +++ ++ +G P Y +++ EAA ++ +E K+N
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+S +Y +++ + K + EA+ L EMK+ G V Y+ L+ + +KA
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM-VKAGMINE 532
Query: 519 AEKLQAEMKENG 530
A L +M+ENG
Sbjct: 533 ANSLLRKMEENG 544
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 151/367 (41%), Gaps = 37/367 (10%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I L+ + ++G + AL+LF++ + C P TY I+ L + D A + M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
L PD + +++ L K +V+E V+ + P + S N ++ L
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPP------- 392
V + D + Y ++ C+ V A L+ +M G PP
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 393 -------------------------GNA---VFNFVITGYSKVGEMGQAVEMMKLLESRG 424
GN V+ +I + K G++ +AV++ ++++G
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
PDVY Y ++SG G + A +L + ++N ++ ++ G+ + A+
Sbjct: 510 SGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAI 569
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRA 543
++ +K SG++ Y+ L+ M +E A ++ EMK+ G +T +++ A
Sbjct: 570 EMFETIKHSGIKPDGVTYNTLLGCFAHAGM-FEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 544 VKEMENE 550
V +++E
Sbjct: 629 VGNVDHE 635
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 149/371 (40%), Gaps = 9/371 (2%)
Query: 161 LRFFRWVWKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTI 220
++FF+W K + +L+ + + + + + ++ E+ +
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSP-----AV 164
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
L++L+ + AL +F + + +C P + TY+ I L + + V +M
Sbjct: 165 LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMC 224
Query: 281 -DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+ PD ++ K + A ++ + + P L+G + ++ G
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG-IYFKVGK 283
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
V AL++ +++ + Y +++ L + V A DM+ +G P N
Sbjct: 284 VEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSG-YSNGGEMEAARKILEEAKKN 458
++ KVG + + + + P V +Y ++ + + + ++ K +
Sbjct: 344 LMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
S Y L+ GYCK + ++AL LL EM + G Y LI +L KA +E
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG-KAKRYEA 462
Query: 519 AEKLQAEMKEN 529
A +L E+KEN
Sbjct: 463 ANELFKELKEN 473
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 365 VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
+V+AL R K V A + P ++ +N VI + G+ + E+ + + G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 425 -LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
PD TY+ ++S Y G ++A ++ +E K N + +Y +L+ Y K+ + ++A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
L L EMK +G +V Y +LI+ L KA + A +M +GL
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLG-KAGRVDEAYGFYKDMLRDGL 334
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 138/354 (38%), Gaps = 42/354 (11%)
Query: 225 IFYFSQLGNGKAALELFD-------KFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
I FS+L + A ++ FD K E N TY+ I L R S A ++
Sbjct: 65 IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILG 124
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
KM+ P + +L C G ++ EA A+ +VE G P + LV L N
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 338 ----------------------------------GTVPLALEMLKDIPGDMRKHAIKPYL 363
G LAL +L + + + Y
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
V+ +LC+ + V A L +M G P ++ +I+ G A ++ + R
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
+ P+V T+ ++ ++ G++ A K+ +E + + V Y+SL+ G+C ++ DEA
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
++ T M V Y+ LI C KA +L +M GL VT
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFC-KAKKVVDGMELFRDMSRRGLVGNTVT 417
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 10/267 (3%)
Query: 266 HSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSS 325
H D A + +M+ ++ P + +L + K KK + + + G + +
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 326 VNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVGAAKQL 381
N ++ L + AL +L G M K P + + +L C + A L
Sbjct: 103 YNIMINCLC-RRSQLSFALAIL----GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 382 ILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSN 441
+ M+ G P F ++ G + + +AV +++ + +G +PD+ TY +++G
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 442 GGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDE 501
GE + A +L + +K V+Y +++ CK D+AL L TEM + G+R V
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 502 YDKLIQSLCLKAMDWETAEKLQAEMKE 528
Y LI LC W A +L ++M E
Sbjct: 278 YSSLISCLC-NYGRWSDASRLLSDMLE 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 11/312 (3%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
AL LF + + P+ TY I L + + AS + ML+ + P+ ++
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN----GTVPLALEMLKDIPG 352
K K+ EA ++ ++++ P + + N L+ + L + KD
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 353 DMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
D + Y ++ C+ K V +L DM G + +I G+ + +
Sbjct: 379 D-----VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVR 472
A + K + S G+ P++ TY ++ G G++E A + E +K+ Y+ +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 473 GYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG-L 531
G CK + ++ L + GV+ V Y+ +I C K + E A L +MKE+G L
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK-EEAYTLFIKMKEDGPL 552
Query: 532 YLKGVTRALIRA 543
G LIRA
Sbjct: 553 PDSGTYNTLIRA 564
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 139/312 (44%), Gaps = 2/312 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN L+ F A+ L D+ P+ T+ + L++H+ A ++ ++M+
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD G ++ LCK + A + +EKGK + V + V
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK-MEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
AL + ++ + + Y +++ LC A +L+ DM+ P FN +
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I ++K G++ +A ++ + R + P++ TY +++G+ ++ A++I
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
+ V Y++L+ G+CK ++ + ++L +M G+ + Y LI +A D + A+
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF-FQASDCDNAQ 435
Query: 521 KLQAEMKENGLY 532
+ +M +G++
Sbjct: 436 MVFKQMVSDGVH 447
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 123/285 (43%), Gaps = 9/285 (3%)
Query: 230 QLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEE 289
Q A+ L ++ C P+ TY I L + D A ++ KM + D
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 290 KVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD 349
++ LCK + V +A ++ + KG P + + + L+ L G A +L
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC-NYGRWSDASRLL-- 298
Query: 350 IPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
DM + I P + +++ A + + A++L +MI P +N +I G+
Sbjct: 299 --SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
+ +A ++ L+ S+ PDV TY +++G+ ++ ++ + + V + V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
Y +L+ G+ + D A + +M GV ++ Y+ L+ LC
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 1/271 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI F++ G A +LFD+ PN TY+ I H D A + M+
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+PD ++ CK KKV + +++ + +G + L+ ++
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF-FQASDC 431
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A + K + D I Y ++ LC+ + A + + + P +N +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
G K G++ ++ L +G+KPDV Y ++SG+ G E A + + K++
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
+ Y++L+R + + + +L+ EM+
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 1/221 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI F + +ELF V N TY I ++ S D+A V ++M+
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ +L LCK K+++A V++ + + P + + N + + + G V
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC-KAGKVE 502
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
++ + K + Y ++ C+ A L + M +GP P + +N +I
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
+ + G+ + E++K + S D TY ++ +G
Sbjct: 563 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 16/311 (5%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
S + N A E+ + + VP++ +Y+ I+ + + A + +M+ +P
Sbjct: 302 LSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV-GKLAYENGTVPLAL-- 344
++ L K++ A + + + EKG + N L+ G + + AL
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 345 EMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
EM+ D I+P Y +++ LCR A +L ++ G P + N +
Sbjct: 422 EMMTD--------GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ G+ +G M +A ++K ++ + PD TY ++ G G+ E AR+++ E K+
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
+ Y++L+ GY K A + EM G ++ Y+ L++ L K + E AE
Sbjct: 534 KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS-KNQEGELAE 592
Query: 521 KLQAEMKENGL 531
+L EMK G+
Sbjct: 593 ELLREMKSEGI 603
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 13/315 (4%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N +I + G K A E F P TY+ +Q + A + +M
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD + IL W+C + E V + + E G P S N L+ + NG
Sbjct: 288 SKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILI-RGCSNNGD- 342
Query: 341 PLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
LEM +M K + P Y ++ L + AA+ LI ++ G +
Sbjct: 343 ---LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT 399
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+N +I GY + G+ +A + + + G++P +TY ++ + A ++ E+
Sbjct: 400 YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVV 459
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
VM ++L+ G+C + D A LL EM + Y+ L++ LC + +
Sbjct: 460 GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG-KF 518
Query: 517 ETAEKLQAEMKENGL 531
E A +L EMK G+
Sbjct: 519 EEARELMGEMKRRGI 533
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 12/274 (4%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P ET + + L R + ++A M + + ++ LCK K+K+A
Sbjct: 188 PKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF 247
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+ G P + + N LV + +E + I +M+ +P Y ++
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRG-----RIEGARLIISEMKSKGFQPDMQTYNPIL 302
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+C + G A +++ +M G P + +N +I G S G++ A + +G+
Sbjct: 303 SWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
P YTY ++ G ++EAA ++ E ++ VL V Y+ L+ GYC+ +A L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
EM G++ + Y LI LC K E E
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 13/243 (5%)
Query: 299 CKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHA 358
C+ + V EA + + EKG YP + N ++ L+ N +E DM +
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLN-----RIENAWVFYADMYRME 220
Query: 359 IK----PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAV 414
IK + ++ LC+ + AK + M G P +N ++ G+S G + A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 415 EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGY 474
++ ++S+G +PD+ TY I+S N G A ++L E K+ V V Y+ L+RG
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 475 CKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLK 534
+ A EM G+ + Y+ LI L ++ E AE L E++E G+ L
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN-KIEAAEILIREIREKGIVLD 396
Query: 535 GVT 537
VT
Sbjct: 397 SVT 399
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 120/277 (43%), Gaps = 53/277 (19%)
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
P+ +L LCK ++K+A V + +V G P S+ +LV +L
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQL------------ 151
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
C+ +VG A QL+ M +G P +N ++ G
Sbjct: 152 ------------------------CKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIV-SGYSNGGEMEAARKILEEAKKNHSVLSP 464
+G + Q+++ ++ L +GL P+ +TY+ ++ + Y G EA K+L+E +
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV-KLLDEIIVKGGEPNL 246
Query: 465 VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQA 524
V Y+ L+ G+CK + D+A+ L E+ G + +V Y+ L++ LC WE A L A
Sbjct: 247 VSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG-RWEEANSLLA 305
Query: 525 EMKE--------------NGLYLKGVTRALIRAVKEM 547
EM N L G T ++ +KEM
Sbjct: 306 EMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 125/300 (41%), Gaps = 13/300 (4%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ LG+ +L+ ++ PNA TY F ++A Y+ D A + +++
Sbjct: 180 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 239
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ +L CK + +A A+++ + KG + S N L+ L + G
Sbjct: 240 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD-GRWE 298
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A +L ++ G R ++ Y ++ +L A Q++ +M GN F
Sbjct: 299 EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-----SKGNHQFRVTA 353
Query: 402 TGYSKV-------GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
T Y+ V G++ V+ + + R KP+ TY I S + +++ A I++
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAM 514
+ Y S++ C+ A +LL EM G Y LI+ LCL+ M
Sbjct: 414 LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 113/291 (38%), Gaps = 38/291 (13%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
+L++ + K A+ + + +P+A Y + + L + A + +KM D
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMED 169
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ ++ LC + ++ + +++KG P + +FL+ E GT
Sbjct: 170 HGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGT-- 227
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A +L+ ++I G P +N ++
Sbjct: 228 ----------------------------------DEAVKLLDEIIVKGGEPNLVSYNVLL 253
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
TG+ K G A+ + + L ++G K +V +Y +++ G E A +L E
Sbjct: 254 TGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRA 313
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG--VRISVDEYDKLIQSLC 510
S V Y+ L+ + ++AL++L EM R++ Y+ +I LC
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 39/244 (15%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKML--DAQSIPDEEKVGDILGWLCKGKKVKEAH 308
P+ TY+ I +L H + A V ++M + Q ++ LCK KV
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVV 373
Query: 309 AVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRA 368
++ + P + N +G L N V A +++ + + Y +V+ +
Sbjct: 374 KCLDEMIYRRCKPNEGTYN-AIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITS 432
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAV-------------------------------- 396
LCR + AA QL+ +M G P
Sbjct: 433 LCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKP 492
Query: 397 ----FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
FN +I G K+ A+E+ +++ + P+ TYA++V G ++ E+E A+++L
Sbjct: 493 TVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552
Query: 453 EEAK 456
+E +
Sbjct: 553 DELR 556
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 150/346 (43%), Gaps = 39/346 (11%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQ-CVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
N LI ++G K A EL + + + CVPNA TY+ I R ++A V +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFL---------V 330
+ + P+ V I+G +C+ + A + + ++G + + L V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 331 GKLAY------ENGTVPLA---LEMLKDIPGDMRKH-AIK---------------PYLAV 365
K Y E G P A ++ + R H AI+ Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ C + +++ DM G P + +N +I+ + K + MM+ + GL
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYCKMEQFDEA 483
P V TY ++ Y + GE++ A K+ ++ HS ++P V+Y+ L+ + K+ F +A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGL-HSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
L L EMK VR +V+ Y+ L + L K ET KL EM E+
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQG-ETLLKLMDEMVEH 716
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 130/281 (46%), Gaps = 8/281 (2%)
Query: 237 ALELFDKFEFFQC----VPNAETYHFT--IQALYRHSLFDSASSVSQKM-LDAQSIPDEE 289
ALE+F++ + V A++ HF I L + A + +M L+ + +P+
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 290 KVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD 349
++ C+ K++ A V + E P + +VN +VG + +G + +A+ D
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG-LNMAVVFFMD 466
Query: 350 IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
+ + K + Y+ ++ A C V +V A M+ G P ++ +I+G +V
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
A+ +++ L+ G D+ Y +++ + + E ++L + +K + Y++
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
L+ + K + F+ +++ +M++ G+ +V Y +I + C
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 42/320 (13%)
Query: 253 AETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYK 312
A ++ + L R+ + + KM + + PD +G ++ LCK ++V EA V++
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 313 AV----VEKGKYPPMSSVNF------------------LVGKLAYENGTVPLA------- 343
+ + G S++F L+ ++ E VP A
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 344 --------LEMLKDIPGDMRKHAIKPYL----AVVRALCRVKDVGAAKQLILDMIANGPP 391
LE K++ M++ IKP + +V +CR + A +DM G
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
+ +I V + +A+ + + G PD Y ++SG A ++
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+E+ K+ L + Y+ L+ +C ++ ++LT+M+ G + Y+ LI S
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI-SFFG 592
Query: 512 KAMDWETAEKLQAEMKENGL 531
K D+E+ E++ +M+E+GL
Sbjct: 593 KHKDFESVERMMEQMREDGL 612
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 135/291 (46%), Gaps = 5/291 (1%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
L+ + + G LEL + E F +PN Y+ + + R D + + +KM +
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
+PD + LCK KV +A ++ + +E +Y + N + L +
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIF-SDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 344 LEMLKDIPGDMRKH----AIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
LE K + +R++ +++ Y ++ L R A+ ++ M G P +N
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ G K+G + A ++ L++ G+ PD TY ++ GY + G+++AA+ +L+E +N+
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ + + L+ KM + EA +LL +M + G + + ++ LC
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 135/310 (43%), Gaps = 6/310 (1%)
Query: 236 AALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL 295
AA ELFD+ C PN T+ ++ + L D + M +P++ I+
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 296 GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
C+ + ++ + + + E+G P + + N + L E G V A + D+ D
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKE-GKVLDASRIFSDMELDEY 283
Query: 356 KHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
+P Y +++ C+V + AK L + N +N + G + G+
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
+A ++K + +G+ P +Y+Y +++ G G + A+ I+ K+N V Y L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
GYC + + D A LL EM + + + L+ SL K AE+L +M E G
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL-WKMGRISEAEELLRKMNEKGY 462
Query: 532 YLKGVTRALI 541
L VT +I
Sbjct: 463 GLDTVTCNII 472
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 14/295 (4%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ Y+ +++ + + S + + M+ P ++ LC V A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+ + EKG P + LV + G LE+L M + P Y +V
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYC-KAGLTDKGLELLNA----MESFGVLPNKVIYNTIV 224
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM---MKLLESR 423
+ CR +++++ M G P FN I+ K G++ A + M+L E
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 424 GL-KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
GL +P+ TY +++ G+ G +E A+ + E ++N + S Y+ ++G + +F E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
A +L +M D G+ S+ Y+ L+ LC M A+ + MK NG+ VT
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGM-LSDAKTIVGLMKRNGVCPDAVT 398
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 18/284 (6%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
P+A TY + D+A S+ Q+M+ +P+ +L L K ++ EA
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+ + + EKG + N +V L +G + A+E++K MR H
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLC-GSGELDKAIEIVKG----MRVHGSAA-------- 499
Query: 370 CRVKDVGAAKQLILD--MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
+ ++G + ++D +I N P ++ ++ G K G +A + + L+P
Sbjct: 500 --LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
D Y + + + G++ +A ++L++ +K S Y+SL+ G Q E L+
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
EMK+ G+ ++ Y+ IQ LC + E A L EM + +
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLC-EGEKVEDATNLLDEMMQKNI 660
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 365 VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
++RALC V AA++L +M G P F ++ GY K G + +E++ +ES G
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
+ P+ Y IVS + G + + K++E+ ++ V V ++S + CK + +A
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 485 KLLTEMK-DSGV---RISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN---------GL 531
++ ++M+ D + R + Y+ +++ C K E A+ L ++EN +
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFC-KVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 532 YLKGVTR--ALIRA---VKEMENEAVEP 554
+L+G+ R I A +K+M ++ + P
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 12/252 (4%)
Query: 248 QCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEA 307
C+P+ TY + L + F A ++ +M+ + PD + CK K+ A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YL 363
V K + +KG + + + N L+ L +N + + +M++ I P Y
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI-----HGLMDEMKEKGISPNICTYN 633
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES- 422
++ LC + V A L+ +M+ P F ++I + KV + A E+ + S
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI 693
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
G K +Y+ ++ + G++ A ++LE L +Y LV CK ++ +
Sbjct: 694 CGQKEGLYS--LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEV 751
Query: 483 ALKLLTEMKDSG 494
A +L +M D G
Sbjct: 752 ASGILHKMIDRG 763
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 302 KKVKEAH-AVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIK 360
++++E H + + ++K K + SV + K + + P + P + K ++
Sbjct: 56 EEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPEN--KPSVY 113
Query: 361 PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLL 420
Y ++ + + + V L DM+ G P FN +I + A E+ +
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM 173
Query: 421 ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQF 480
+G KP+ +T+ ++V GY G + ++L + + + V+Y+++V +C+ +
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 481 DEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
D++ K++ +M++ G+ + ++ I +LC
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALC 263
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 153/358 (42%), Gaps = 39/358 (10%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQ-CVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
N LI ++G K A EL + + + CVPNA TY+ I R ++A V +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFL---------V 330
+ + P+ V I+G +C+ + A + + ++G + + L V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 331 GKLAY------ENGTVPLA---LEMLKDIPGDMRKH-AIK---------------PYLAV 365
K Y E G P A ++ + R H AI+ Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ C + +++ DM G P + +N +I+ + K + MM+ + GL
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYCKMEQFDEA 483
P V TY ++ Y + GE++ A K+ ++ HS ++P V+Y+ L+ + K+ F +A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGL-HSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
L L EMK VR +V+ Y+ L + L K ET KL EM E +T ++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKT-QGETLLKLMDEMVEQSCEPNQITMEIL 728
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 130/281 (46%), Gaps = 8/281 (2%)
Query: 237 ALELFDKFEFFQC----VPNAETYHFT--IQALYRHSLFDSASSVSQKM-LDAQSIPDEE 289
ALE+F++ + V A++ HF I L + A + +M L+ + +P+
Sbjct: 348 ALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAV 407
Query: 290 KVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD 349
++ C+ K++ A V + E P + +VN +VG + +G + +A+ D
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG-LNMAVVFFMD 466
Query: 350 IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
+ + K + Y+ ++ A C V +V A M+ G P ++ +I+G +V
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
A+ +++ L+ G D+ Y +++ + + E ++L + +K + Y++
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
L+ + K + F+ +++ +M++ G+ +V Y +I + C
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 42/320 (13%)
Query: 253 AETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYK 312
A ++ + L R+ + + KM + + PD +G ++ LCK ++V EA V++
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 313 AV----VEKGKYPPMSSVNF------------------LVGKLAYENGTVPLA------- 343
+ + G S++F L+ ++ E VP A
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 344 --------LEMLKDIPGDMRKHAIKPYL----AVVRALCRVKDVGAAKQLILDMIANGPP 391
LE K++ M++ IKP + +V +CR + A +DM G
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
+ +I V + +A+ + + G PD Y ++SG A ++
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+E+ K+ L + Y+ L+ +C ++ ++LT+M+ G + Y+ LI S
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI-SFFG 592
Query: 512 KAMDWETAEKLQAEMKENGL 531
K D+E+ E++ +M+E+GL
Sbjct: 593 KHKDFESVERMMEQMREDGL 612
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 11/264 (4%)
Query: 278 KMLDAQSIPDEEKVGD-ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYE 336
K + +++P + V + I+ LC + A+ +V++G P + + N L+ L E
Sbjct: 289 KEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKE 348
Query: 337 NGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPP 392
+ D+ G M+ + P Y +++ LC DV A + +L M+ + P
Sbjct: 349 G-----KFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP 403
Query: 393 GNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
++N VI GY + G+ A+ ++ L+ S G+KP+VYT ++ GY GG + A +
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVK 463
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
E + Y+ L+ C + A +L EM G + + Y +L++ LC K
Sbjct: 464 NEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWK 523
Query: 513 AMDWETAEKLQAEMKENGLYLKGV 536
+ AE L + ++ G+ + V
Sbjct: 524 GR-LKKAESLLSRIQATGITIDHV 546
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 115/312 (36%), Gaps = 88/312 (28%)
Query: 244 FEFFQCVPNAETYHFTI-QALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGK 302
F++ C+ + H +I + L D+A + +KM+ + IP +L LCK
Sbjct: 115 FDYDDCL----SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAG 170
Query: 303 KVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPY 362
+++A + + + E G P S N L+ L N V AL + M K+ I+P
Sbjct: 171 YIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVN-NVDKALYLFNT----MNKYGIRPN 225
Query: 363 LA----VVRALCRVKDVGAAKQLILDMI-----ANGP----------------------- 390
+V ALC+ +G + +L+ I AN P
Sbjct: 226 RVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQAL 285
Query: 391 -----------PPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGY 439
P + V+N +I G G M A M + RG+ PDV+TY
Sbjct: 286 EVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY------- 338
Query: 440 SNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISV 499
++L+ CK +FDEA L M++ GV
Sbjct: 339 ----------------------------NTLISALCKEGKFDEACDLHGTMQNGGVAPDQ 370
Query: 500 DEYDKLIQSLCL 511
Y +IQ LC+
Sbjct: 371 ISYKVIIQGLCI 382
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 21/287 (7%)
Query: 258 FTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVG---DILGWLCKGKKVKEAHAVYKAV 314
F + S D +S+ + + +S ++ + I+ LC K+ A + K +
Sbjct: 88 FNVLDYILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKM 147
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALC 370
+ G P + + N L+ L + G + A ++++ MR+ P Y +++ LC
Sbjct: 148 IYSGVIPGLITHNHLLNGLC-KAGYIEKADGLVRE----MREMGPSPNCVSYNTLIKGLC 202
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE-----SRGL 425
V +V A L M G P N ++ + G +G + KLLE S+
Sbjct: 203 SVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK--KLLEEILDSSQAN 260
Query: 426 KP-DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
P D+ +++ G + A ++ +E + + V+Y+ ++RG C A
Sbjct: 261 APLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAY 320
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+ +M GV V Y+ LI +LC K ++ A L M+ G+
Sbjct: 321 GFMCDMVKRGVNPDVFTYNTLISALC-KEGKFDEACDLHGTMQNGGV 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 99/241 (41%), Gaps = 17/241 (7%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ TY+ I AL + FD A + M + PD+ I+ LC V A+
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 311 YKAVVEKGKYPPMSSVNFLV-GKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
++++ P + N ++ G Y + + L++ L M + +KP + AL
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNL------MLSYGVKPNVYTNNAL 446
Query: 370 C-------RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
R+ D K +M + P +N ++ +G + A ++ +
Sbjct: 447 IHGYVKGGRLIDAWWVKN---EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR 503
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
RG +PD+ TY +V G G ++ A +L + + V + L + Y ++++ E
Sbjct: 504 RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGE 563
Query: 483 A 483
A
Sbjct: 564 A 564
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 116/234 (49%), Gaps = 13/234 (5%)
Query: 318 GKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIK-----PYLAVVRALCRV 372
G P N LV K +NG + A ++++ M++ I Y ++ L
Sbjct: 191 GLQPNTCIFNILV-KHHCKNGDINFAFLVVEE----MKRSGISYPNSITYSTLMDCLFAH 245
Query: 373 KDVGAAKQLILDMIAN-GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
A +L DMI+ G P FN +I G+ + GE+ +A +++ ++ G P+VY
Sbjct: 246 SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN 305
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y+ +++G+ G+++ A++ +E KK L V Y +L+ +C+ + DEA+KLL EMK
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 492 DSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYL-KGVTRALIRAV 544
S R Y+ +++ L + E + L E G++L KG R ++ A+
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE-GVHLNKGSYRIILNAL 418
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 8/238 (3%)
Query: 299 CKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHA 358
CK + A V + + G P S + + + A+E+ +D+ + K
Sbjct: 207 CKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM---ISKEG 263
Query: 359 IKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAV 414
I P + ++ CR +V AK+++ M NG P ++ ++ G+ KVG++ +A
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Query: 415 EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGY 474
+ ++ GLK D Y +++ + GE + A K+L E K + + Y+ ++RG
Sbjct: 324 QTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGL 383
Query: 475 CKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
+ +EAL++L + GV ++ Y ++ +LC + E A K + M E G++
Sbjct: 384 SSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG-ELEKAVKFLSVMSERGIW 440
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 118/266 (44%), Gaps = 11/266 (4%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKM-LDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
PN ++ ++ ++ + A V ++M S P+ ++ L + KEA
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 310 VYKAVVEK-GKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLA 364
+++ ++ K G P + N ++ +E K I M+K+ P Y A
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAG-----EVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 365 VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
++ C+V + AKQ ++ G + ++ + + GE +A++++ +++
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
+ D TY VI+ G S+ G E A ++L++ L+ Y ++ C + ++A+
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLC 510
K L+ M + G+ +++L+ LC
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLC 454
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
I+ LCK A ++ + +KG +P + + + ++ +G A ++L+D+
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC-RSGRWTDAEQLLRDMIER 140
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ + A++ AL + V A+++ DM+ G P +N +I G+ K + A
Sbjct: 141 QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDA 200
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
M+ + S+ PDV T++ +++GY ++ +I E + V + V Y +L+ G
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
+C++ D A LL M SGV + + ++ SLC K
Sbjct: 261 FCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 127/279 (45%), Gaps = 13/279 (4%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
TI+N L ++G+ ++AL L K E + Y+ I L + A ++ +
Sbjct: 46 TIINGL----CKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTE 101
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M D PD ++ C+ + +A + + ++E+ P + + + L+ L E G
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKE-G 160
Query: 339 TVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
V A ++I GDM + I P Y +++ C+ + AK+++ M + P
Sbjct: 161 KVSEA----EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
F+ +I GY K + +E+ + RG+ + TY ++ G+ G+++AA+ +L
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS 493
+ + + + S++ C ++ +A +L +++ S
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M++ PD ++ LC +V +A A+ +VE+G P + +N L + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLC-----KMG 55
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
AL +L + K + Y A++ LC+ A+ L +M G P ++
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I + + G A ++++ + R + PDV T++ +++ G++ A +I + +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+ + Y+S++ G+CK ++ ++A ++L M V + LI C KA +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC-KAKRVDN 234
Query: 519 AEKLQAEMKENGLYLKGVT 537
++ EM G+ VT
Sbjct: 235 GMEIFCEMHRRGIVANTVT 253
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 137/295 (46%), Gaps = 31/295 (10%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTI------------QALYRH---SLFDSA 272
FS+ G+ +AA FD+ + NA Y I +AL R D+
Sbjct: 389 FSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAP 448
Query: 273 SSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGK 332
++ M+D ++ +EK G + V+K + E G P + + L+
Sbjct: 449 IAIYHTMMDGYTMVADEKKGLV---------------VFKRLKECGFTPTVVTYGCLIN- 492
Query: 333 LAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPP 392
L + G + ALE+ + + + KH +K Y ++ ++KD A + DM+ G P
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 393 GNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
++N +I+ + +G M +A++ +K ++ +P T+ I+ GY+ G+M + ++
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQ 507
+ ++ V + ++ L+ G + Q ++A+++L EM +GV + Y K++Q
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 138/312 (44%), Gaps = 10/312 (3%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI ++++G ALE+ + N +TY I + + +A +V + M+
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
PD +I+ C + A K + +K ++ P + + ++G + +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEM-QKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 344 LEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
LE+ D+ MR+ P + ++ L + + A +++ +M G +
Sbjct: 609 LEVF-DM---MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ GY+ VG+ G+A E L++ GL D++TY ++ G M++A + +E +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ +Y+ L+ G+ + EA L+ +MK GV+ + Y I S C KA D A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI-SACSKAGDMNRA 783
Query: 520 EKLQAEMKENGL 531
+ EM+ G+
Sbjct: 784 TQTIEEMEALGV 795
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 8/307 (2%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
+I +++ G+ + +LE+FD CVP T++ I L + A + +M A
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
+E I+ +A + + +G + + L+ K ++G + A
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL-KACCKSGRMQSA 713
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
L + K++ Y ++ R DV A LI M G P + I+
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
SK G+M +A + ++ +E+ G+KP++ TY ++ G++ E A EE K
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 464 PVMYHSLVRGYCKMEQFDEA------LKLLTEMKDSGVRISVDEYDKLIQSLC-LKAMDW 516
+YH L+ EA + + EM ++G+ + + + LC ++A
Sbjct: 834 KAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGG 893
Query: 517 ETAEKLQ 523
E E LQ
Sbjct: 894 ELTETLQ 900
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 77/149 (51%)
Query: 365 VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
+V+ R D+ A++ M A G P + ++ +I Y+ +M +A+ ++ ++ G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
++ + TY+VIV G+S G EAA +EAK+ H L+ +Y ++ +C+ + A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
L+ EM++ G+ + Y ++ + A
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y ++ A C+ ++ A+ L+ +M G A+++ ++ GY+ V + + + + K L+
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAA---RKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
G P V TY +++ Y+ G++ A ++++E H++ + Y ++ G+ K++
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT---YSMMINGFVKLK 533
Query: 479 QFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ A + +M G++ V Y+ +I + C
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFC 565
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 152/358 (42%), Gaps = 39/358 (10%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQ-CVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
N LI ++G K A EL + + + C PNA TY+ I R ++A V +M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFL---------V 330
+ + P+ V I+G +C+ + A + + ++G + + L V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 331 GKLAY------ENGTVPLA---LEMLKDIPGDMRKH-AIK---------------PYLAV 365
K Y E G P A ++ + R H AI+ Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ C + +++ DM G P + +N +I+ + K + MM+ + GL
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYCKMEQFDEA 483
P V TY ++ Y + GE++ A K+ ++ HS ++P V+Y+ L+ + K+ F +A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGL-HSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
L L EMK VR +V+ Y+ L + L K ET KL EM E +T ++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKT-QGETLLKLMDEMVEQSCEPNQITMEIL 728
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 129/281 (45%), Gaps = 8/281 (2%)
Query: 237 ALELFDKFEFFQC----VPNAETYHFT--IQALYRHSLFDSASSVSQKM-LDAQSIPDEE 289
ALE+F+K + V A++ HF I L + A + +M L+ + P+
Sbjct: 348 ALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAV 407
Query: 290 KVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD 349
++ C+ K++ A V + E P + +VN +VG + +G + +A+ D
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG-LNMAVVFFMD 466
Query: 350 IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
+ + K + Y+ ++ A C V +V A M+ G P ++ +I+G +V
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
A+ +++ L+ G D+ Y +++ + + E ++L + +K + Y++
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
L+ + K + F+ +++ +M++ G+ +V Y +I + C
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 42/320 (13%)
Query: 253 AETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYK 312
A ++ + L R+ + + KM + + PD +G ++ LCK ++V EA V++
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 313 AV----VEKGKYPPMSSVNF------------------LVGKLAYENGTVPLA------- 343
+ + G S++F L+ ++ E P A
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLI 413
Query: 344 --------LEMLKDIPGDMRKHAIKPYL----AVVRALCRVKDVGAAKQLILDMIANGPP 391
LE K++ M++ IKP + +V +CR + A +DM G
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
+ +I V + +A+ + + G PD Y ++SG A ++
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+E+ K+ L + Y+ L+ +C ++ ++LT+M+ G + Y+ LI S
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI-SFFG 592
Query: 512 KAMDWETAEKLQAEMKENGL 531
K D+E+ E++ +M+E+GL
Sbjct: 593 KHKDFESVERMMEQMREDGL 612
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 116/287 (40%), Gaps = 36/287 (12%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI ++ + G+ A+++F K F CV ++ + I L + + A S D +
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ ++ + A V+ ++E P + + N L+G
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIG------------ 229
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
LCR D+G AK L+ DMI P F ++ G
Sbjct: 230 ------------------------FLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKG 265
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
GE +A ++M +E RG KP + Y +++S G ++ A+ +L E KK
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD 325
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
V+Y+ LV C + EA ++LTEM+ G + + Y +I C
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 125/292 (42%), Gaps = 1/292 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN LI G + A FD + + PN+ +++ I+ +++A V +ML
Sbjct: 154 LNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEML 213
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ + P ++G+LC+ + +A ++ + +++K P + L+ L + G
Sbjct: 214 EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCK-GEY 272
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A +++ D+ K + Y ++ L + + AK L+ +M P ++N +
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNIL 332
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ + +A ++ ++ +G KP+ TY +++ G+ + ++ +L +
Sbjct: 333 VNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRH 392
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
+P + +V G K D A +L M + + L+ LC+K
Sbjct: 393 CPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+H Y +++ L + ++ A Q++ + ++F +I Y K G + +A++
Sbjct: 78 RHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAID 137
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
+ + S + + +++ + GE+E A+ + AK + V ++ L++G+
Sbjct: 138 VFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFL 197
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKG 535
++ A K+ EM + V+ SV Y+ LI LC + D A+ L +M + +
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC-RNDDMGKAKSLLEDMIKKRIRPNA 256
Query: 536 VTRALI 541
VT L+
Sbjct: 257 VTFGLL 262
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
N +I GE+ +A + L+P+ ++ +++ G+ + + EAA K+ +E
Sbjct: 154 LNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEML 213
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
+ S V Y+SL+ C+ + +A LL +M +R + + L++ LC K ++
Sbjct: 214 EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG-EY 272
Query: 517 ETAEKLQAEMKENG 530
A+KL +M+ G
Sbjct: 273 NEAKKLMFDMEYRG 286
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
I+ LCK A ++ + EKG +P + + N ++ + +G A ++L+ +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCH-SGRWSDADQLLRHMIEK 74
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
I + A++ A + + V A+++ +M+ P +N +I G+ K + A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
M+ + S+G PDV T++ +++GY ++ +I E + V + V Y +L+ G
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
+C++ D A LL EM GV + ++ LC K
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
GN A LF + PN TY+ I + + A + + M++ Q PD
Sbjct: 24 GNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTF 83
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ K +KV EA +YK ++ +P + N ++ ++ V A ML +
Sbjct: 84 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD-RVDDAKRMLDSMA 142
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
+ + ++ C+ K V ++ +M G + +I G+ +VG++
Sbjct: 143 SKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLD 202
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
A +++ + S G+ PD T+ +++G + E+ A ILE+ +K+
Sbjct: 203 AAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
A+V LC+ + A+ L +M G P +N +I + G A ++++ + +
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
+ PD+ T++ +++ + ++ A +I +E + + + Y+S++ G+CK ++ D+A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
++L M G V + LI C KA + ++ EM G+ VT
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYC-KAKRVDNGMEIFCEMHRRGIVANTVT 187
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 44/286 (15%)
Query: 248 QCV-PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKE 306
+C+ P+ TY+ I +H+ FD A + M D + PD I+ C+ K+V E
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 307 AHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVV 366
+ + + +G ++ N L+
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLI------------------------------------ 474
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
C V ++ AA+ L +MI++G P N ++ G+ + ++ +A+E+ ++++ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV-MYHSLVRGYCKMEQFDEALK 485
D Y +I+ G G +++ A + H V V Y+ ++ G+C +A
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI-HGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
L +MKD+G Y+ LI+ CLKA + + + +L +EM+ NG
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRG-CLKAGEIDKSIELISEMRSNGF 638
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 119/280 (42%), Gaps = 6/280 (2%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN TY+ I + A + + M++ + PD ++ K K+ EA +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
++ + +P + N ++ N + K + M + + ++ C
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHN-----RFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
R K V QL+ ++ G +N +I G+ +V + A ++ + + S G+ PD
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
T +++ G+ ++E A ++ E + + L V Y+ ++ G CK + DEA L +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 491 KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
GV V Y+ +I C K+ A L +MK+NG
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNG 602
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 7/282 (2%)
Query: 269 FDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNF 328
F A ++ +M++ P ++ LC +V EA A+ +V KG + + +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 329 LVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN 388
+V + + G AL +L + K + Y A++ LC+ A+ L +M+
Sbjct: 267 IVNGMC-KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G P +N +I G+ G A +++ + R + PDV T+ ++S G++ A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
K+ +E V Y+S++ G+CK +FD+A + M V ++ +I
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDV 441
Query: 509 LCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRAVKEMEN 549
C +A + +L E+ GL T LI E++N
Sbjct: 442 YC-RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 13/245 (5%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
TY + + + SA ++ KM + PD I+ LCK +A ++ +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALC 370
+EKG P + + N ++ G A +L+ DM + I P + A++ A
Sbjct: 323 LEKGIAPNVFTYNCMIDGFC-SFGRWSDAQRLLR----DMIEREINPDVLTFNALISASV 377
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ + A++L +M+ P +N +I G+ K A M L+ S PDV
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
T+ I+ Y ++ ++L E + V + Y++L+ G+C+++ + A L EM
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 491 KDSGV 495
GV
Sbjct: 494 ISHGV 498
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 18/307 (5%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ LFD+ P T++ I L A+++ KM+ D G I+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
+CK K A + + E P + + ++ +L ++G A + +M +
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC-KDGHHSDAQYLF----SEMLE 324
Query: 357 HAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
I P Y ++ C A++L+ DMI P FN +I+ K G++ +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSL 470
A ++ + R + PD TY ++ G+ + A+ + + + SP V ++++
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD------LMASPDVVTFNTI 438
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+ YC+ ++ DE ++LL E+ G+ + Y+ LI C + + A+ L EM +G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC-EVDNLNAAQDLFQEMISHG 497
Query: 531 LYLKGVT 537
+ +T
Sbjct: 498 VCPDTIT 504
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 84/193 (43%), Gaps = 1/193 (0%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
V N TY+ I ++A + Q+M+ PD +L C+ +K++EA
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+++ + + N ++ + + V A ++ +P + ++ Y ++
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMC-KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C + A L M NG P N+ +N +I G K GE+ +++E++ + S G D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 430 YTYAVIVSGYSNG 442
+T ++ ++G
Sbjct: 643 FTIKMVADLITDG 655
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 143/331 (43%), Gaps = 40/331 (12%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN L+ F A+ L D+ P+ T+ I L+ H+ A ++ +M+
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210
Query: 281 DAQSIPDEEKVGDILGWLCK---------------GKKVKEAHAVYKAVVEKGKYPPMSS 325
PD G ++ LCK K++ +Y V++
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS-------- 262
Query: 326 VNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQL 381
+ K +E+ + L EM ++P Y +++ LC A +L
Sbjct: 263 ----LCKYRHEDDALNLFTEM--------ENKGVRPNVITYSSLISCLCNYGRWSDASRL 310
Query: 382 ILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSN 441
+ DMI P F+ +I + K G++ +A ++ + + R + P+++TY+ +++G+
Sbjct: 311 LSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 442 GGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDE 501
+ A+++LE + + + V Y++L+ G+CK ++ D+ ++L EM G+ +
Sbjct: 371 LDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 502 YDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
Y LI +A D + A+ + +M G++
Sbjct: 431 YTTLIHGF-FQARDCDNAQMVFKQMVSVGVH 460
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 137/354 (38%), Gaps = 42/354 (11%)
Query: 225 IFYFSQLGNGKAALELFD-------KFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ 277
I FS+L + A + FD K E N TY+ I R S A ++
Sbjct: 78 IIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLG 137
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
KM+ PD + +L C G ++ +A A+ +VE G P + L+ L N
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 338 ----------------------------------GTVPLALEMLKDIPGDMRKHAIKPYL 363
G LAL +L + + + Y
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
V+ +LC+ + A L +M G P ++ +I+ G A ++ + R
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
+ P++ T++ ++ + G++ A K+ EE K + Y SL+ G+C +++ EA
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
++L M +V Y+ LI C KA + +L EM + GL VT
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFC-KAKRVDKGMELFREMSQRGLVGNTVT 430
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 352 GDMRKHAIKPYLAVVRAL----CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
G M K +P + + +L C + A L+ M+ G P F +I G
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLH 196
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
+ +AV ++ + RG +PD+ TY +V+G G+ + A +L + + + V+Y
Sbjct: 197 NKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIY 256
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
+++ CK D+AL L TEM++ GVR +V Y LI LC W A +L ++M
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC-NYGRWSDASRLLSDMI 315
Query: 528 ENGLYLKGVT-RALIRA 543
E + VT ALI A
Sbjct: 316 ERKINPNLVTFSALIDA 332
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 131/292 (44%), Gaps = 14/292 (4%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQAL--YRHSLFDSASSVSQKMLDAQSIPDEE 289
G+ AL L +K E + N Y I +L YRH D A ++ +M + P+
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE--DDALNLFTEMENKGVRPNVI 289
Query: 290 KVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD 349
++ LC + +A + ++E+ P + + + L+ + V +
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA-----EK 344
Query: 350 IPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
+ +M K +I P Y +++ C + +G AKQ++ MI P +N +I G+
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
K + + +E+ + + RGL + TY ++ G+ + + A+ + ++ + +
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
Y+ L+ G CK + +A+ + ++ S + + Y+ +I+ +C KA W+
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC-KAGKWK 515
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 9/278 (3%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ L D+ C P+ TY + L + D A ++ KM A+ + ++
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
LCK + +A ++ + KG P + + + L+ L G A +L DM +
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC-NYGRWSDASRLL----SDMIE 316
Query: 357 HAIKPYL----AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
I P L A++ A + + A++L +MI P ++ +I G+ + +G+
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVR 472
A +M++L+ + P+V TY +++G+ ++ ++ E + V + V Y +L+
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 473 GYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
G+ + D A + +M GV ++ Y+ L+ LC
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 194/449 (43%), Gaps = 32/449 (7%)
Query: 109 GKLENVVSLLQREDAD-GSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENL-LRFFRW 166
G++E + +L+ + LE +L+ + L +I L R G NL RFF W
Sbjct: 65 GEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRC----GDAGNLGYRFFLW 120
Query: 167 VWKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIF 226
K+ + V +S+V + + ++F ++W L + L+
Sbjct: 121 ATKQPGYFHSYEVCKSMVMILS----KMRQFGAVWGLIEEMRKTNPELIEPELFV-VLMR 175
Query: 227 YFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIP 286
F+ K A+E+ D+ + P+ + + AL ++ AS V + M + + P
Sbjct: 176 RFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPP 234
Query: 287 DEEKVGDIL-GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
+ +L GW C+ K+ EA V + E G P + L+ A+ G + A
Sbjct: 235 NLRYFTSLLYGW-CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHA-GKMADAY- 291
Query: 346 MLKDIPGDMRKHAIKP----YLAVVRALCRV-KDVGAAKQLILDMIANGPPPGNAVFNFV 400
D+ DMRK +P Y +++ALCR K + A ++ ++M G + +
Sbjct: 292 ---DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I+G+ K G + + ++ + +G+ P TY I+ + + E +++E+ K+
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
++Y+ ++R CK+ + EA++L EM+ +G+ VD + +I + E
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 521 KLQAEMKENGLY-------LKGVTRALIR 542
+ EM G++ LK + L+R
Sbjct: 469 HFK-EMVSRGIFSAPQYGTLKSLLNNLVR 496
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 35/320 (10%)
Query: 248 QCV-PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKE 306
+C+ P+ TY+ I +H+ FD A + M D + PD I+ C+ K+V E
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 307 AHAVYKAVVEKGKYPPMSSVNFLV-GKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAV 365
+ + + +G ++ N L+ G +N L +D+ +M H + P
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDN------LNAAQDLFQEMISHGVCPDTIT 504
Query: 366 VRAL----CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
L C + + A +L + + +N +I G K ++ +A ++ L
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
G++PDV TY V++SG+ + A + + K N Y++L+RG K + D
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 482 EALKLLTEMKDSGVRISVDEYD-KLIQSLCLKAMDWETAEKLQAEMKENGLYLK----GV 536
++++L++EM+ +G S D + K+ + + + D E E YL+ G
Sbjct: 625 KSIELISEMRSNG--FSGDAFTIKMAEEIICRVSDEEIIEN----------YLRPKINGE 672
Query: 537 TRALIRAVKEMENE--AVEP 554
T ++ R V E+ E VEP
Sbjct: 673 TSSIPRYVVELAEELYTVEP 692
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 119/280 (42%), Gaps = 6/280 (2%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN TY+ I + A + + M++ + PD ++ K K+ EA +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
++ + +P + N ++ N + K + M + + ++ C
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHN-----RFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
R K V QL+ ++ G +N +I G+ +V + A ++ + + S G+ PD
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
T +++ G+ ++E A ++ E + + L V Y+ ++ G CK + DEA L +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 491 KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
GV V Y+ +I C K+ A L +MK+NG
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSA-ISDANVLFHKMKDNG 602
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 135/311 (43%), Gaps = 8/311 (2%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I F G A L + P+ T++ I A + A + +ML
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD ++ CK + +A ++ + P + + N ++ + V
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTII-DVYCRAKRVD 449
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
+++L++I Y ++ C V ++ AA+ L +MI++G P N ++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G+ + ++ +A+E+ ++++ + D Y +I+ G G +++ A + H V
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI-HGV 568
Query: 462 LSPV-MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
V Y+ ++ G+C +A L +MKD+G Y+ LI+ CLKA + + +
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG-CLKAGEIDKSI 627
Query: 521 KLQAEMKENGL 531
+L +EM+ NG
Sbjct: 628 ELISEMRSNGF 638
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 7/282 (2%)
Query: 269 FDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNF 328
F A ++ +M++ P ++ LC +V EA A+ +V KG + + +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 329 LVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN 388
+V + + G AL +L + K + Y A++ LC+ A+ L +M+
Sbjct: 267 IVNGMC-KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G P +N +I G+ G A +++ + R + PDV T+ ++S G++ A
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
K+ +E V Y+S++ G+CK +FD+A + M V ++ +I
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVT----FNTIIDV 441
Query: 509 LCLKAMDWETAEKLQAEMKENGLYLKGVT-RALIRAVKEMEN 549
C +A + +L E+ GL T LI E++N
Sbjct: 442 YC-RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 5/256 (1%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
TY + + + SA ++ KM + PD I+ LCK +A ++ +
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKD 374
+EKG P + + N ++ G A +L+D+ + + A++ A +
Sbjct: 323 LEKGIAPNVFTYNCMIDGFC-SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 375 VGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAV 434
+ A++L +M+ P +N +I G+ K A M L+ S PDV T+
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNT 437
Query: 435 IVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
I+ Y ++ ++L E + V + Y++L+ G+C+++ + A L EM G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 495 VRISVDEYDKLIQSLC 510
V + L+ C
Sbjct: 498 VCPDTITCNILLYGFC 513
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 18/307 (5%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ LFD+ P T++ I L A+++ KM+ D G I+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
+CK K A + + E P + + ++ +L ++G A + +M +
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC-KDGHHSDAQYLF----SEMLE 324
Query: 357 HAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
I P Y ++ C A++L+ DMI P FN +I+ K G++ +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSL 470
A ++ + R + PD TY ++ G+ + A+ + + + SP V ++++
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD------LMASPDVVTFNTI 438
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+ YC+ ++ DE ++LL E+ G+ + Y+ LI C + + A+ L EM +G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC-EVDNLNAAQDLFQEMISHG 497
Query: 531 LYLKGVT 537
+ +T
Sbjct: 498 VCPDTIT 504
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 135/300 (45%), Gaps = 5/300 (1%)
Query: 233 NGKAALELFDKFE--FFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEK 290
+G AL+ F + + V +A ++ I R L + S+ +M + P +
Sbjct: 69 HGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKT 128
Query: 291 VGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDI 350
+ K +A ++ + E G + ++S N ++ L ++ V A E+ + +
Sbjct: 129 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC-KSKRVEKAYELFRAL 187
Query: 351 PGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
G + Y ++ C +K A +++ +M+ G P +N ++ G+ + G++
Sbjct: 188 RGRFSVDTVT-YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSL 470
A E ++ R + DV TY +V G+ GE++ AR + +E + + S Y+++
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
++ CK + + A+ + EM G +V Y+ LI+ L A ++ E+L M+ G
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL-FHAGEFSRGEELMQRMENEG 365
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 126/285 (44%), Gaps = 2/285 (0%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
++ G A++LF C + +++ + L + + A + + + S+ D
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-D 194
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
IL C K+ +A V K +VE+G P +++ N ++ K + G + A E
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML-KGFFRAGQIRHAWEFF 253
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
++ + + Y VV ++ A+ + +MI G P A +N +I K
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
+ AV M + + RG +P+V TY V++ G + GE ++++ + + Y
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
+ ++R Y + + ++AL L +M ++D Y+ LI + ++
Sbjct: 374 NMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVR 418
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 162/381 (42%), Gaps = 18/381 (4%)
Query: 155 GLVENLLRFFRWVWKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXX 214
G V++ L+ + + K+N SL+H +C + +K EL
Sbjct: 269 GRVDDCLKIWERM-KQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDV-- 325
Query: 215 XXXXTILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASS 274
N ++ F + G K +LEL+ E V N +Y+ I+ L + D A+
Sbjct: 326 ----VTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATM 380
Query: 275 VSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLA 334
+ + M D+ G + LC V +A V + V G + + + ++ L
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440
Query: 335 YENGTVPLALEMLKDIPGDMRKHAIK----PYLAVVRALCRVKDVGAAKQLILDMIANGP 390
+ LE ++ +M KH ++ A++ L R +G A + +M NG
Sbjct: 441 KKK-----RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 391 PPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARK 450
P +N +I G K G+ G+A +K + G KPD+ TY++++ G +++ A +
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 451 ILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ + ++ +M++ L+ G C + + D+A+ ++ M+ ++ Y+ L++
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF- 614
Query: 511 LKAMDWETAEKLQAEMKENGL 531
K D A + M + GL
Sbjct: 615 FKVGDSNRATVIWGYMYKMGL 635
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
TY I L + + A V Q++ + D I+ LCK K+++EA + K +
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKD 374
+ G N L+G L + + A L+++ + + + Y ++ LC+
Sbjct: 456 SKHGVELNSHVCNALIGGLI-RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 375 VGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAV 434
G A + +M+ NG P ++ ++ G + ++ A+E+ GL+ DV + +
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 435 IVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
++ G + G+++ A ++ + + + V Y++L+ G+ K+ + A + M G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 495 VRISVDEYDKLIQSLCL 511
++ + Y+ +++ LC+
Sbjct: 635 LQPDIISYNTIMKGLCM 651
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 237 ALELFDKF-EFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL 295
AL++F + E F C P +Y+ + A + S+ A P+ + ++
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 296 GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
CK K+ ++A + ++G P + S + ++ LA + G + ALE+ ++
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLA-KAGKLDDALELFDEMSERGV 215
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP-PGNAVFNFVITGYSKVGEMGQAV 414
+ Y ++ + KD A +L ++ + P N +I+G SK G + +
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 415 EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGY 474
++ + ++ + D+YTY+ ++ G + G ++ A + E + + + V Y++++ G+
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 475 CKMEQFDEALKL--LTEMKDSGVRISVDEYDKLIQSL 509
C+ + E+L+L + E K+S +++ Y+ LI+ L
Sbjct: 336 CRCGKIKESLELWRIMEHKNS---VNIVSYNILIKGL 369
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 131/293 (44%), Gaps = 5/293 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ +Y I L + D A + +M + PD ++ K K K A +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 311 YKAVVEKGK-YPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+ ++E YP + + N ++ L+ + G V L++ + + + R+ + Y +++ L
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLS-KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGL 300
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C +V A+ + ++ +N ++ G+ + G++ +++E+ +++E + ++
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNI 359
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
+Y +++ G G+++ A I Y + G C ++AL ++ E
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE 419
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKG-VTRALI 541
++ SG + V Y +I LC K E A L EM ++G+ L V ALI
Sbjct: 420 VESSGGHLDVYAYASIIDCLC-KKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 3/223 (1%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
N+ + I L R S AS ++M P ++ LCK K EA A
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
K ++E G P + + + L+ L + + LALE+ + + + ++ LC
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDR-KIDLALELWHQFLQSGLETDVMMHNILIHGLCS 581
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
V + A ++ +M +N ++ G+ KVG+ +A + + GL+PD+ +
Sbjct: 582 VGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIIS 641
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV-MYHSLVRG 473
Y I+ G + A + ++A +NH + V ++ LVR
Sbjct: 642 YNTIMKGLCMCRGVSYAMEFFDDA-RNHGIFPTVYTWNILVRA 683
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 150/328 (45%), Gaps = 5/328 (1%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
T+L + + S+ G + A+E+++ + + T + + + D + ++
Sbjct: 146 TLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKE 205
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M++++ D E++ ++ LC G V E + + K +++G P L+ E G
Sbjct: 206 MVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC-EIG 262
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
E+L + ++ Y +++ LC K A + ++ G P V+
Sbjct: 263 NYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT 322
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I G+ + G +G A ++ + +G++P+ + Y V++ G+ GE+ E +N
Sbjct: 323 TMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+ + +++++G+C + DEA ++ M ++GV + Y+ LI+ C K E
Sbjct: 383 GYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC-KENKVEK 441
Query: 519 AEKLQAEMKENGLYLKGVT-RALIRAVK 545
KL E+K GL G+ AL+R +K
Sbjct: 442 GLKLYKELKALGLKPSGMAYAALVRNLK 469
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 147/358 (41%), Gaps = 33/358 (9%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ NK+ F + G AA E PN Y+ + A R D A S+ +M
Sbjct: 451 MCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM 510
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN-- 337
L+ P+ ++ K K + A V M++ NF ++ Y
Sbjct: 511 LEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ---------MNASNFEANEVIYNTII 561
Query: 338 ------GTVPLALEMLKDIPGDMR-KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGP 390
G A EML+++ + R + Y +++ +V D +A + +M NG
Sbjct: 562 NGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK 621
Query: 391 PPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARK 450
P F +I G+ K M A+EM ++S LK D+ Y ++ G+ +M+ A
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYT 681
Query: 451 ILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ E + + + +Y+SL+ G+ + + D A+ L +M + G+ + Y +I L
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL- 740
Query: 511 LKAMDWETAEKLQAEMKE--------------NGLYLKGVTRALIRAVKEMENEAVEP 554
LK + A L +E+ + NGL KG + ++EM+ + V P
Sbjct: 741 LKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 2/238 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
I+ K A Y+ + E GK P + + L+ N + LALEM ++
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN-RMDLALEMTHEMKSM 654
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
K + Y A++ C+ D+ A L ++ G P +V+N +I+G+ +G+M A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
+++ K + + G+ D++TY ++ G G + A + E V +++ LV G
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
K QF +A K+L EMK V +V Y +I + + A +L EM E G+
Sbjct: 775 LSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG-NLNEAFRLHDEMLEKGI 831
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 144/330 (43%), Gaps = 39/330 (11%)
Query: 248 QCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEA 307
+ VP + + +L R +L D A + KM+ D ++ + +K +EA
Sbjct: 199 KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIK-PYLAVV 366
+++ V+ +G P + V + A + + +AL++L+++ G + A + Y +V+
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAV-QAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
A + ++ A +++ +M+ G P ++ GY K E+G+A+++ +E GL
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG------------- 473
PD ++V+V + EME A + K S V+ H++++G
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 474 ---------------------YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC-L 511
+CK + D A L M+ G+ +V Y+ ++ + C +
Sbjct: 438 FNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM 497
Query: 512 KAMDWETAEKLQAEMKENGLYLKGVTRALI 541
K MD A + +EM E GL T +++
Sbjct: 498 KNMDL--ARSIFSEMLEKGLEPNNFTYSIL 525
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 9/302 (2%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI + G + A+ D+ +PN +Y IQA + +D AS + +M +
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD G ++ L + +A + ++++G P + N L+ L +P
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
L + +M I P Y ++ R D A+++ + G
Sbjct: 469 AKL-----LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N +I G+ + G + +A+ M + L PD +TY+ I+ GY +M A KI +K
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
N + V Y SL+ G+C F A + EM+ + +V Y LI+SL ++ E
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 518 TA 519
A
Sbjct: 644 KA 645
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 134/300 (44%), Gaps = 15/300 (5%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + +LG+ + A +F + + +P ET+ I + F ++ + ++ +
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKE 303
Query: 282 AQSIPDEEKVGDILGWLCK-GKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ +I+ + G KV A ++ + K P +++ N L+ +L E G
Sbjct: 304 RGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK-PDVATYNILINRLCKE-GKK 361
Query: 341 PLALEMLKD------IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
+A+ L + IP ++ Y +++A C+ K+ A +L+L M G P
Sbjct: 362 EVAVGFLDEASKKGLIPNNL------SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
+ +I G G M AV M L RG+ PD Y +++SG G A+ + E
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAM 514
+ + +Y +L+ G+ + FDEA K+ + + GV++ V ++ +I+ C M
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 127/290 (43%), Gaps = 2/290 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKF-EFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
L+ ++ +++ G+ A+E++D E + VP+ + + L + A V +M
Sbjct: 137 LSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEM 196
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
D D ++ +C KV+ + + KG P + N ++G + G
Sbjct: 197 CDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYC-KLGD 255
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ A + K++ ++ + ++ C+ D A+ +L+ ++ G N
Sbjct: 256 IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNN 315
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+I + G E + + + KPDV TY ++++ G+ E A L+EA K
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ + + Y L++ YCK +++D A KLL +M + G + + Y LI L
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGL 425
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 4/271 (1%)
Query: 260 IQALYRHSL-FDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKG 318
I A YRH D A S+ ++ PD ++ LCK K + A +KG
Sbjct: 317 IDAKYRHGYKVDPAESIGW-IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375
Query: 319 KYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAA 378
P S L+ ++ +A ++L + K I Y ++ L + A
Sbjct: 376 LIPNNLSYAPLIQAYC-KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 379 KQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSG 438
+ + +I G P A++N +++G K G A + + R + PD Y YA ++ G
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 439 YSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRIS 498
+ G+ + ARK+ + + + V ++++++G+C+ DEAL + M + +
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554
Query: 499 VDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
Y +I +K D TA K+ M++N
Sbjct: 555 KFTYSTIIDGY-VKQQDMATAIKIFRYMEKN 584
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P N +++ K +G A ++ + RG D Y+ ++V G N G++E RK+
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+E + + V Y++++ GYCK+ + A + E+K G +++ + +I C
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC- 286
Query: 512 KAMDWETAEKLQAEMKENGL 531
K D+ +++L +E+KE GL
Sbjct: 287 KEGDFVASDRLLSEVKERGL 306
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 2/274 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI + + AL + D+ E PN TY+ I R A+ + +++ D
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD 301
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ I G+ C+ + EA + + + +G P + + N ++ KL E+G +
Sbjct: 302 DVTANHVTYTTLIDGY-CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLC-EDGRIR 359
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A +L ++ G + ++ A C+++D+ +A ++ MI +G + +I
Sbjct: 360 EANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G+ KV E+ A E + + +G P TY+ +V G+ N + + K+LEE +K
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
+Y L+R CK+EQ D A L M+ G+
Sbjct: 480 ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 142/316 (44%), Gaps = 11/316 (3%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ + L+ Y+++ G ++ +F++ P+ + + +L + L D+ + +KM
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+ + + ++ K ++A + + EKG +P + + N L+ ++
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS-- 252
Query: 340 VPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
+ E L + M + + P Y + + R + A +L + I + +
Sbjct: 253 --MHFEAL-SVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHV 308
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+ +I GY ++ ++ +A+ + +++ESRG P V TY I+ G + A ++L E
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
+ ++L+ YCK+E A+K+ +M +SG+++ + Y LI C K ++
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC-KVLE 427
Query: 516 WETAEKLQAEMKENGL 531
E A++ M E G
Sbjct: 428 LENAKEELFSMIEKGF 443
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 2/287 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N I FS+ G + A LF + + N TY I R + D A + + M
Sbjct: 277 NSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMES 335
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P IL LC+ +++EA+ + + K P + N L+ V
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS 395
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A+++ K + K + Y A++ C+V ++ AK+ + MI G PG A +++++
Sbjct: 396 -AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLV 454
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G+ + + ++++ E RGL DV Y ++ +++ A+ + E +K V
Sbjct: 455 DGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
V++ ++ Y + + EA L M + + +++ Y + S
Sbjct: 515 GDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISAS 561
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 386 IANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEM 445
++ P + VF++++ Y+K G + ++ + + + S GLKP + V+++
Sbjct: 125 VSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLT 184
Query: 446 EAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKL 505
+ KI ++ K V + +Y+ LV K ++A KLL+EM++ GV + Y+ L
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 506 IQSLCLKAMDWETAEKLQAEMKENGL 531
I C K+M +E A +Q M+ +G+
Sbjct: 245 ISVYCKKSMHFE-ALSVQDRMERSGV 269
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 141/335 (42%), Gaps = 47/335 (14%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD--AQSIPDEEKVGDI 294
AL F+ + + P+ T++ I L + A + M + A+ PD I
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDM 354
+ +++ AV++A+V +G P + S N L+G A +G AL +L GD+
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV-HGMSGTALSVL----GDI 381
Query: 355 RKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
+++ I P Y ++ + R + G AK++ L M P +N +I Y G +
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 411 GQAVEMMKLLESRGLKPDVYT-----------------------------------YAVI 435
+AVE+ + +E G+KP+V + Y
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
+ Y N E+E A + + +K V + L+ G C+M ++ EA+ L EM+D +
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 496 RISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
++ + Y ++ + + E AE + +MK G
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTE-AESIFNQMKMAG 595
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 145/363 (39%), Gaps = 40/363 (11%)
Query: 219 TILNKLIFYFSQLGNGKAALELFD-------------------------KFEFFQC---- 249
T N +I+ S+LG AL+LF+ K E C
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 250 --------VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKG 301
PN +Y+ + A H + +A SV + IPD +L +
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 302 KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP 361
++ +A V+ + ++ + P + + N L+ NG + A+E+ + + D K +
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG-SNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
++ A R K ++ + G A +N I Y E+ +A+ + + +
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
+ +K D T+ +++SG + A L+E + L+ +Y S++ Y K Q
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 582
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RAL 540
EA + +MK +G V Y ++ + + W A +L EM+ NG+ + AL
Sbjct: 583 EAESIFNQMKMAGCEPDVIAYTSMLHAYN-ASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 541 IRA 543
+RA
Sbjct: 642 MRA 644
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 6/295 (2%)
Query: 240 LFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLC 299
LF + + + C P+AETY I A R + A ++ ML A P +++
Sbjct: 165 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 300 KGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG-TVPLALEMLKDIPGDMRKHA 358
+EA V K + + G P + + N ++ AY++G AL + + G +
Sbjct: 225 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLS--AYKSGRQYSKALSYFELMKGAKVRPD 282
Query: 359 IKPYLAVVRALCRVKDVGAAKQLILDMIANGPP--PGNAVFNFVITGYSKVGEMGQAVEM 416
+ ++ L ++ A L M P F ++ YS GE+ +
Sbjct: 283 TTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAV 342
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ + + GLKP++ +Y ++ Y+ G A +L + K+N + V Y L+ Y +
Sbjct: 343 FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 402
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
Q +A ++ M+ + +V Y+ LI + E E + +M+++G+
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR-QMEQDGI 456
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 121/282 (42%), Gaps = 7/282 (2%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
+ LI + G + A+ L D P+ TY+ I A + A V +KM D
Sbjct: 182 DALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTD 241
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD +L G++ +A + ++ + P ++ N ++ L+ + G
Sbjct: 242 NGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS-KLGQSS 300
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGA----AKQLILDMIANGPPPGNAVF 397
AL++ + ++ +P + ++ + V + + M+A G P +
Sbjct: 301 QALDLFNSM--REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N ++ Y+ G G A+ ++ ++ G+ PDV +Y +++ Y + A+++ +K
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISV 499
+ V Y++L+ Y EA+++ +M+ G++ +V
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 10/273 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN TY+ I A + A + ++M P+ V +L + KK V
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
A +G ++ N +G +Y N LE + MRK +K + ++
Sbjct: 483 LSAAQSRGINLNTAAYNSAIG--SYINAA---ELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
CR+ A + +M P V++ V+ YSK G++ +A + ++ G +
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 597
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
PDV Y ++ Y+ + A ++ E + N + +L+R + K Q L
Sbjct: 598 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 657
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ M++ + + + ++ S C +W+ A
Sbjct: 658 MDLMREKEIPFTGAVFFEIF-SACNTLQEWKRA 689
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 115/263 (43%), Gaps = 8/263 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ T +++L D A + +++ + S PD +L LCK K+ H V
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCK---CKDLHVV 213
Query: 311 YKAVVEKGK----YPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVV 366
Y+ V E P + S L+ + + + A+ ++ + K Y ++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVC-NSKNLREAMYLVSKLGNAGFKPDCFLYNTIM 272
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+ C + A + M G P +N +I G SK G + +A +K + G +
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE 332
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
PD TY +++G GE A +LEE + + Y++L+ G CK D+ ++L
Sbjct: 333 PDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMEL 392
Query: 487 LTEMKDSGVRISVDEYDKLIQSL 509
MK SGV++ + Y L++SL
Sbjct: 393 YEMMKSSGVKLESNGYATLVRSL 415
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 143/323 (44%), Gaps = 18/323 (5%)
Query: 242 DKFEFFQCV----PNAETYHFTIQALYRHSLFDSASSVSQK------MLDAQSIPDEEKV 291
D + FQ + PN T L H+ SS+S M++ PD+
Sbjct: 103 DTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTT 162
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
+ LC+ +V EA + K + EK P + NFL+ L + + + E + ++
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC-KCKDLHVVYEFVDEMR 221
Query: 352 GDMR-KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
D K + + ++ +C K++ A L+ + G P ++N ++ G+ + +
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSL 470
+AV + K ++ G++PD TY ++ G S G +E AR L+ Y SL
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+ G C+ + AL LL EM+ G + Y+ L+ LC KA + +L MK +G
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC-KARLMDKGMELYEMMKSSG 400
Query: 531 LYLKG-----VTRALIRAVKEME 548
+ L+ + R+L+++ K E
Sbjct: 401 VKLESNGYATLVRSLVKSGKVAE 423
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 247 FQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKE 306
F P+ ++ I + A + K+ +A PD I+ C K E
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 307 AHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVV 366
A VYK + E+G P + N L+ L+ + G V A LK + + Y +++
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLS-KAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+CR + A L+ +M A G P + +N ++ G K M + +E+ ++++S G+K
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
+ YA +V G++ A ++ + A + S+ Y +L + LK
Sbjct: 403 LESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL----------ETTLKW 452
Query: 487 LTEMKDSGV 495
L + K+ G+
Sbjct: 453 LKKAKEQGL 461
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 360 KPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
K Y ++ +L R V K+L +M+ + P FN ++ GY K+G + +A + +
Sbjct: 121 KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
L G PD +TY ++G+ E++AA K+ +E +N + V Y L+ G + ++
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
DEAL LL +MKD +V Y LI +LC E A L +M E+G+
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE-AMNLFKQMSESGI 291
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 135/292 (46%), Gaps = 8/292 (2%)
Query: 242 DKFEF-FQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCK 300
D FE ++ P + Y+ + +L R L + + +ML+ PD ++ CK
Sbjct: 110 DSFEIKYKLTP--KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 301 GKKVKEAHAVYKAVVEKGKYPP-MSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAI 359
V EA +++ G P + +F+ G V A ++ K++ +
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC--RRKEVDAAFKVFKEMTQNGCHRNE 225
Query: 360 KPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
Y ++ L K + A L++ M + P + +I G+ +A+ + K
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQ 285
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+ G+KPD Y V++ + +G ++ A +LE +N + + + Y++L++G+CK +
Sbjct: 286 MSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KN 344
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+A+ LL++M + + + Y+ LI C + + ++A +L + M+E+GL
Sbjct: 345 VHKAMGLLSKMLEQNLVPDLITYNTLIAGQC-SSGNLDSAYRLLSLMEESGL 395
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 80/193 (41%), Gaps = 2/193 (1%)
Query: 236 AALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL 295
AA ++F + C N +Y I L+ D A S+ KM D P+ ++
Sbjct: 208 AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 296 GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
LC + EA ++K + E G P L+ T+ A +L+ + +
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC-SGDTLDEASGLLEHMLENGL 326
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+ Y A+++ C+ K+V A L+ M+ P +N +I G G + A
Sbjct: 327 MPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYR 385
Query: 416 MMKLLESRGLKPD 428
++ L+E GL P+
Sbjct: 386 LLSLMEESGLVPN 398
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 141/335 (42%), Gaps = 47/335 (14%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD--AQSIPDEEKVGDI 294
AL F+ + + P+ T++ I L + A + M + A+ PD I
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDM 354
+ +++ AV++A+V +G P + S N L+G A +G AL +L GD+
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAV-HGMSGTALSVL----GDI 249
Query: 355 RKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
+++ I P Y ++ + R + G AK++ L M P +N +I Y G +
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 411 GQAVEMMKLLESRGLKPDVYT-----------------------------------YAVI 435
+AVE+ + +E G+KP+V + Y
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 369
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
+ Y N E+E A + + +K V + L+ G C+M ++ EA+ L EM+D +
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 429
Query: 496 RISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
++ + Y ++ + + E AE + +MK G
Sbjct: 430 PLTKEVYSSVLCAYSKQGQVTE-AESIFNQMKMAG 463
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 145/363 (39%), Gaps = 40/363 (11%)
Query: 219 TILNKLIFYFSQLGNGKAALELFD-------------------------KFEFFQC---- 249
T N +I+ S+LG AL+LF+ K E C
Sbjct: 152 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 211
Query: 250 --------VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKG 301
PN +Y+ + A H + +A SV + IPD +L +
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 302 KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP 361
++ +A V+ + ++ + P + + N L+ NG + A+E+ + + D K +
Sbjct: 272 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG-SNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
++ A R K ++ + G A +N I Y E+ +A+ + + +
Sbjct: 331 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 390
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
+ +K D T+ +++SG + A L+E + L+ +Y S++ Y K Q
Sbjct: 391 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 450
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RAL 540
EA + +MK +G V Y ++ + + W A +L EM+ NG+ + AL
Sbjct: 451 EAESIFNQMKMAGCEPDVIAYTSMLHAYN-ASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 541 IRA 543
+RA
Sbjct: 510 MRA 512
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 6/295 (2%)
Query: 240 LFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLC 299
LF + + + C P+AETY I A R + A ++ ML A P +++
Sbjct: 33 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 300 KGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG-TVPLALEMLKDIPGDMRKHA 358
+EA V K + + G P + + N ++ AY++G AL + + G +
Sbjct: 93 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLS--AYKSGRQYSKALSYFELMKGAKVRPD 150
Query: 359 IKPYLAVVRALCRVKDVGAAKQLILDMIANGPP--PGNAVFNFVITGYSKVGEMGQAVEM 416
+ ++ L ++ A L M P F ++ YS GE+ +
Sbjct: 151 TTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAV 210
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ + + GLKP++ +Y ++ Y+ G A +L + K+N + V Y L+ Y +
Sbjct: 211 FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 270
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
Q +A ++ M+ + +V Y+ LI + E E + +M+++G+
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFR-QMEQDGI 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 121/282 (42%), Gaps = 7/282 (2%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
+ LI + G + A+ L D P+ TY+ I A + A V +KM D
Sbjct: 50 DALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTD 109
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD +L G++ +A + ++ + P ++ N ++ L+ + G
Sbjct: 110 NGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS-KLGQSS 168
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGA----AKQLILDMIANGPPPGNAVF 397
AL++ + ++ +P + ++ + V + + M+A G P +
Sbjct: 169 QALDLFNSM--REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N ++ Y+ G G A+ ++ ++ G+ PDV +Y +++ Y + A+++ +K
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISV 499
+ V Y++L+ Y EA+++ +M+ G++ +V
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 10/273 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN TY+ I A + A + ++M P+ V +L + KK V
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
A +G ++ N +G +Y N LE + MRK +K + ++
Sbjct: 351 LSAAQSRGINLNTAAYNSAIG--SYINAA---ELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
CR+ A + +M P V++ V+ YSK G++ +A + ++ G +
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 465
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
PDV Y ++ Y+ + A ++ E + N + +L+R + K Q L
Sbjct: 466 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 525
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ M++ + + + ++ S C +W+ A
Sbjct: 526 MDLMREKEIPFTGAVFFEIF-SACNTLQEWKRA 557
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 132/298 (44%), Gaps = 27/298 (9%)
Query: 254 ETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGW---------------- 297
ET+ + L ++ F SA S+ + +L + KV D L +
Sbjct: 116 ETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLF 175
Query: 298 --LCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
KK + A + + + G P + S N + L + G V +AL ++ MR
Sbjct: 176 KTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ-GRVDIALRFYRE----MR 230
Query: 356 KHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
+ I P V+ CR + +L+ DM G + +N +I G+ + G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A+++ ++ GL+P+V T+ ++ G+ +++ A K+ E K + + V Y++L+
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
GY + + A + +M +G++ + Y+ LI LC +A + A+ ++ KEN
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 149/349 (42%), Gaps = 24/349 (6%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ + L F+ L + A + F + + + +P E+ + + +L D A ++M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+ P+ + ++ C+ K+ + + + + G S N L+ E G
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC-EKGL 288
Query: 340 VPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
+ AL+ LK++ G K ++P + ++ CR + A ++ +M A P
Sbjct: 289 LSSALK-LKNMMG---KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+N +I GYS+ G+ A + + G++ D+ TY ++ G + A + ++E
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
K + V + + +L+ G C + D +L M SG + ++ L+ + C + D
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC-RNED 463
Query: 516 WETAEKLQAEMKE--------------NGLYLKGVTRALIRAVKEMENE 550
++ A ++ EM NGL +G + + + ++EME +
Sbjct: 464 FDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 27/225 (12%)
Query: 351 PGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANG--PPPGNA------------- 395
PG H+++ + V+ L + + +A+ ++ D++ NG P
Sbjct: 110 PGS---HSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDS 166
Query: 396 ---VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
VF+ + ++ + + A + ++ G P V + +S G ++ A +
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
E ++ +P + ++ GYC+ + D+ ++LL +M+ G R + Y+ LI C K
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 513 AMDWETAEKLQAEMKENGLYLKGVT-----RALIRAVKEMENEAV 552
+ +A KL+ M ++GL VT RA+K E V
Sbjct: 287 GL-LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKV 330
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 132/298 (44%), Gaps = 27/298 (9%)
Query: 254 ETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGW---------------- 297
ET+ + L ++ F SA S+ + +L + KV D L +
Sbjct: 116 ETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLF 175
Query: 298 --LCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
KK + A + + + G P + S N + L + G V +AL ++ MR
Sbjct: 176 KTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQ-GRVDIALRFYRE----MR 230
Query: 356 KHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
+ I P V+ CR + +L+ DM G + +N +I G+ + G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A+++ ++ GL+P+V T+ ++ G+ +++ A K+ E K + + V Y++L+
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
GY + + A + +M +G++ + Y+ LI LC +A + A+ ++ KEN
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 149/349 (42%), Gaps = 24/349 (6%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ + L F+ L + A + F + + + +P E+ + + +L D A ++M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+ P+ + ++ C+ K+ + + + + G S N L+ E G
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC-EKGL 288
Query: 340 VPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
+ AL+ LK++ G K ++P + ++ CR + A ++ +M A P
Sbjct: 289 LSSALK-LKNMMG---KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+N +I GYS+ G+ A + + G++ D+ TY ++ G + A + ++E
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
K + V + + +L+ G C + D +L M SG + ++ L+ + C + D
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC-RNED 463
Query: 516 WETAEKLQAEMKE--------------NGLYLKGVTRALIRAVKEMENE 550
++ A ++ EM NGL +G + + + ++EME +
Sbjct: 464 FDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 27/225 (12%)
Query: 351 PGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANG--PPPGNA------------- 395
PG H+++ + V+ L + + +A+ ++ D++ NG P
Sbjct: 110 PGS---HSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDS 166
Query: 396 ---VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
VF+ + ++ + + A + ++ G P V + +S G ++ A +
Sbjct: 167 TPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
E ++ +P + ++ GYC+ + D+ ++LL +M+ G R + Y+ LI C K
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEK 286
Query: 513 AMDWETAEKLQAEMKENGLYLKGVT-----RALIRAVKEMENEAV 552
+ +A KL+ M ++GL VT RA+K E V
Sbjct: 287 GL-LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKV 330
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 8/318 (2%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
L+ F++ G KA L D+ A T++ I L A V ++ + ++
Sbjct: 158 LMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGL---ARDVVEQFIKSK 214
Query: 284 SI---PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ P + IL L K+ K VY+ ++E G P + + N +V + G
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYN-IVMFANFRLGKT 273
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
+L ++ D + Y ++ L AA L+ M G PG F +
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I G S+ G++ M G PDV Y V+++GY +GGE+E A ++ +E +
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
+ + Y+S++RG+C +F EA LL EM+ G + Y L+ +L A A
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL-KNAGKVLEAH 452
Query: 521 KLQAEMKENGLYLKGVTR 538
++ +M E G Y+ +++
Sbjct: 453 EVVKDMVEKGHYVHLISK 470
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 125/279 (44%), Gaps = 11/279 (3%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI + G + +E F K + F P +Y+ + +L + V ++ML
Sbjct: 190 FNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQML 249
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ PD ++ + K + + +V+ G P + + N L+ LA G
Sbjct: 250 EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA--TGNK 307
Query: 341 PL-ALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
PL AL +L MR+ ++P + ++ L R + A K + + + G P
Sbjct: 308 PLAALNLLN----HMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+ +ITGY GE+ +A EM K + +G P+V+TY ++ G+ G+ + A +L+E
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
+ + V+Y +LV + EA +++ +M + G
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 164/388 (42%), Gaps = 78/388 (20%)
Query: 228 FSQLGNGKAALELFDK-FEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIP 286
F ++G + AL F+ + VPN TY + AL + D + +++ D
Sbjct: 181 FCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF 240
Query: 287 DEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM 346
D + + KG + +A + +VEKG + S + L+ L+ E G V AL +
Sbjct: 241 DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKE-GNVEEALGL 299
Query: 347 LKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
L G M K ++P Y A++R LC++ + A L +++ G ++ +I
Sbjct: 300 L----GKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKP------------------------------DVYTY 432
G + G + +A M+ +E RG++P DV TY
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITY 415
Query: 433 AVIVSGYSNGGEMEAA----RKILEEAKKNHSVLSPVM---------------------- 466
+ ++ Y ++A R+ LE V+ ++
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPE 475
Query: 467 ---------YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
Y ++++GYCK Q +EAL++ E++ S V +V Y+++I +LC K M +
Sbjct: 476 MDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKKGM-LD 533
Query: 518 TAEKLQAEMKENGLYLK-GVTRALIRAV 544
TA ++ E+ E GLYL +R L+ ++
Sbjct: 534 TATEVLIELWEKGLYLDIHTSRTLLHSI 561
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 7/286 (2%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI S+ GN + AL L K PN TY I+ L + + A + ++L
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
DE ++ +C+ + A ++ + ++G P + + N ++ L G V A
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA-GRVSEA 401
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
E+ K + GD + Y ++ + +V+++ A ++ + P + N ++
Sbjct: 402 DEVSKGVVGD-----VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKA 456
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
+ +G G+A + + + L PD TYA ++ GY G++E A ++ E +K+ SV +
Sbjct: 457 FLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS-SVSA 515
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
V Y+ ++ CK D A ++L E+ + G+ + + L+ S+
Sbjct: 516 AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSI 561
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 9/192 (4%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y +++ LC+ + A +L + G P + +I K G A +++ +
Sbjct: 693 YNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMV 752
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
S+GL P++ Y IV GY G+ E A +++ S+++GYCK +
Sbjct: 753 SKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
EAL + TE KD + + LI+ C K E A L EM V+ +++
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKG-RMEEARGLLREML--------VSESVV 863
Query: 542 RAVKEMENEAVE 553
+ + ++ E E
Sbjct: 864 KLINRVDAELAE 875
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 141/343 (41%), Gaps = 47/343 (13%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSV------------ 275
+ + G + ALE+F++ V A Y+ I AL + + D+A+ V
Sbjct: 492 YCKTGQIEEALEMFNELRK-SSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 276 ---SQKMLDAQSIPDEEK--------------------VGDILGWLCKGKKVKEAHAVYK 312
S+ +L + +K + D + LCK + A VY
Sbjct: 551 IHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYM 610
Query: 313 AVVEKGKYP--PMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+ KG P + + LV L ++ L ++ + + Y ++ LC
Sbjct: 611 IMRRKGLTVTFPSTILKTLVDNLR----SLDAYLLVVNAGETTLSSMDVIDYTIIINGLC 666
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ + A L + G +N +I G + G + +A+ + LE+ GL P
Sbjct: 667 KEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEV 726
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
TY +++ G A K+L+ V + ++Y+S+V GYCK+ Q ++A+++++
Sbjct: 727 TYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR- 785
Query: 491 KDSGVRISVDEY--DKLIQSLCLKAMDWETAEKLQAEMKENGL 531
K G R++ D + +I+ C K D E A + E K+ +
Sbjct: 786 KMMG-RVTPDAFTVSSMIKGYCKKG-DMEEALSVFTEFKDKNI 826
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 137/313 (43%), Gaps = 16/313 (5%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
+ ++GN K A + + E P E Y+ I +++ + + + ++ P
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
G ++ C + +A+A ++EKG ++ + + L + L +
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670
Query: 348 KDIPGDMR---KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP-----PGNAVFNF 399
K + D+ ++K +L C Q I + + N P P N V+N
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEASATTC------LKTQKIAESVENSTPKKLLVPNNIVYNV 724
Query: 400 VITGYSKVGEMGQAVEMMK-LLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
I G K G++ A ++ LL S PD YTY +++ G + G++ A + +E
Sbjct: 725 AIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALK 784
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+ + V Y++L++G CK+ D A +LL ++ G+ + Y+ LI L +K+ +
Sbjct: 785 GIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL-VKSGNVAE 843
Query: 519 AEKLQAEMKENGL 531
A +L+ +M E GL
Sbjct: 844 AMRLKEKMIEKGL 856
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 365 VVRALCRVKDVGAAKQLILDMIANGPPPGNAV-FNFVITGYSKVGEMGQAVEMMKLLESR 423
VV A CR +V A + ++ N V +N +I GY+ +G++ +++L+ R
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
G+ +V TY ++ GY G ME A + E K+ V MY L+ GYC+ Q +A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKE 528
+++ M + GVR + + LI C K+ AE++ + M +
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYC-KSGQLVEAEQIFSRMND 394
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 4/195 (2%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y ++ CR + A ++ +MI G + N +I GY K G++ +A ++ +
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
LKPD +TY +V GY G ++ A K+ ++ + V + + Y+ L++GY ++ F
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT-RAL 540
+ L L M GV L+++L K D+ A KL + GL +T +
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEAL-FKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 541 IRAVKEME--NEAVE 553
I + +ME NEA E
Sbjct: 513 ISGLCKMEKVNEAKE 527
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 5/296 (1%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ + + G AL+L D+ + VP TY+ ++ R F S+ + ML
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
DE +L L K EA +++ V+ +G ++N ++ L + V
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLC-KMEKVN 523
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A E+L ++ K A++ Y A+ +V ++ A + M G P ++N +I
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
+G K + + +++ L +RGL P V TY +++G+ N G ++ A E +
Sbjct: 584 SGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGIT 643
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI----SVDEYDKLIQSLCLKA 513
L+ + + ++++ DEA LL ++ D + + S+ E+ + + CLK
Sbjct: 644 LNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT 699
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 127/291 (43%), Gaps = 1/291 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
TI N LI + + G A ++F + + P+ TY+ + R D A + +
Sbjct: 367 TICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQ 426
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M + +P +L + + +++K ++++G S + L+ L ++ G
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL-FKLG 485
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
A+++ +++ ++ LC+++ V AK+++ ++ P +
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ 545
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+ GY KVG + +A + + +E +G+ P + Y ++SG + ++ E +
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ Y +L+ G+C + D+A EM + G+ ++V+ K+ SL
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 152/384 (39%), Gaps = 19/384 (4%)
Query: 155 GLVENLLRFFRWVWKEN-SSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXX 213
G VE + R R + + S NV T SL+ C + E E ++EL
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVT--YTSLIKGYCKKGLME-EAEHVFELLKEKKLVADQ 331
Query: 214 XXXXXTILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSAS 273
+ L+ + + G + A+ + D N + I + A
Sbjct: 332 H-----MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 274 SVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV--- 330
+ +M D PD ++ C+ V EA + + +K P + + N L+
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 331 GKLAYENGTVPLALEMLK-DIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANG 389
++ + + L MLK + D + ++ AL ++ D A +L +++A G
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCS-----TLLEALFKLGDFNEAMKLWENVLARG 501
Query: 390 PPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAAR 449
N +I+G K+ ++ +A E++ + KP V TY + GY G ++ A
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 450 KILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ E ++ + MY++L+ G K ++ L+ E++ G+ +V Y LI
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGW 621
Query: 510 CLKAMDWETAEKLQAEMKENGLYL 533
C M + A EM E G+ L
Sbjct: 622 CNIGM-IDKAYATCFEMIEKGITL 644
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 12/339 (3%)
Query: 160 LLRFFRWVWKENSSNVTTPVVE-SLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXX 218
+LRFF WV K N + S+ A C K+F + L
Sbjct: 661 VLRFFSWVGKRNGYKHNSEAYNMSIKVAGCG-----KDFKQMRSLFYEMRRQGCLITQDT 715
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALY--RHSLFDSASSVS 276
+ +I + + G A+ F + + +P++ T+ I L + + A+
Sbjct: 716 WAI--MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTF 773
Query: 277 QKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYE 336
++M+ + +PD E V D LG LC+ K+A + ++ + G +P + + + L
Sbjct: 774 REMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALC-R 831
Query: 337 NGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
G + AL L G+ Y ++V L + D+ A + M G PG V
Sbjct: 832 IGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHV 891
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+ +I + K ++ + +E + +E +P V TY ++ GY + G++E A +
Sbjct: 892 YTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
+ + Y + C+ + ++ALKLL+EM D G+
Sbjct: 952 ERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 5/285 (1%)
Query: 249 CVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLC--KGKKVKE 306
C+ +T+ I R L + A ++M D IP ++ LC KG+ V+E
Sbjct: 709 CLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEE 768
Query: 307 AHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVV 366
A ++ ++ G P V +G L E G A L D G + Y +
Sbjct: 769 ATRTFREMIRSGFVPDRELVQDYLGCLC-EVGNTKDAKSCL-DSLGKIGFPVTVAYSIYI 826
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
RALCR+ + A + + ++ G + G++ +A++ + ++ G K
Sbjct: 827 RALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTK 886
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
P V+ Y ++ + ++E + ++ + S V Y +++ GY + + +EA
Sbjct: 887 PGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNA 946
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
M++ G Y K I LC +A E A KL +EM + G+
Sbjct: 947 FRNMEERGTSPDFKTYSKFINCLC-QACKSEDALKLLSEMLDKGI 990
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 114/291 (39%), Gaps = 2/291 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
T N +I G G ALE + + TY + + + D S++
Sbjct: 260 TAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADD 319
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M+ I + + G +L C K+KEA + + + K LV L N
Sbjct: 320 MVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANR 379
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
V ALE++ DI + Y ++ R DV A + + +G PP + +
Sbjct: 380 MVD-ALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYT 437
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
++ K+ + + + + G++PD +V+G+ + A K+ ++
Sbjct: 438 EIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEK 497
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ Y V+ C+ ++DE +K+ +M S + I D + +I S+
Sbjct: 498 GIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSM 548
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 134/304 (44%), Gaps = 5/304 (1%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F ++G + A++L F PN Y + + AS++ Q++ + +PD
Sbjct: 351 FCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
++ C + +A + A+++ G P +++ L+G + G++ A +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS-RFGSISDAESVF 466
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
+++ + K + Y ++ + + +LI +M + G P A +N +I
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G + +A E++ L RG P + ++ G+S G+ + A + V
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
+L+ GYCK ++ ++A+ L ++ D+G++ V Y+ LI C D E A +L M
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC-SVGDIEKACELIGLMV 645
Query: 528 ENGL 531
+ G+
Sbjct: 646 QRGM 649
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
+++++ + RV + A++ + M++ G AV + I Y G + E++ ++
Sbjct: 240 ISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH 299
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
G++PD+ + V + G ++ A +L + K V S++ G+CK+ + +E
Sbjct: 300 YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEE 359
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
A+KL+ + +R ++ Y + ++C D A + E+ E GL
Sbjct: 360 AIKLIHSFR---LRPNIFVYSSFLSNIC-STGDMLRASTIFQEIFELGL 404
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 134/304 (44%), Gaps = 5/304 (1%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F ++G + A++L F PN Y + + AS++ Q++ + +PD
Sbjct: 351 FCKVGKPEEAIKLIHSFRL---RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
++ C + +A + A+++ G P +++ L+G + G++ A +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS-RFGSISDAESVF 466
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
+++ + K + Y ++ + + +LI +M + G P A +N +I
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G + +A E++ L RG P + ++ G+S G+ + A + V
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
+L+ GYCK ++ ++A+ L ++ D+G++ V Y+ LI C D E A +L M
Sbjct: 587 SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYC-SVGDIEKACELIGLMV 645
Query: 528 ENGL 531
+ G+
Sbjct: 646 QRGM 649
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
+++++ + RV + A++ + M++ G AV + I Y G + E++ ++
Sbjct: 240 ISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH 299
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
G++PD+ + V + G ++ A +L + K V S++ G+CK+ + +E
Sbjct: 300 YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEE 359
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
A+KL+ + +R ++ Y + ++C D A + E+ E GL
Sbjct: 360 AIKLIHSFR---LRPNIFVYSSFLSNIC-STGDMLRASTIFQEIFELGL 404
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 18/286 (6%)
Query: 249 CVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAH 308
C P+A +Y I ++ L ++++ S+ + ++ LCK K A
Sbjct: 212 CCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNA-----LINGLCKEHDYKGAF 266
Query: 309 AVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRA 368
+ + +VEKG P + S + L+ L +G + LA L M K P + + +
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLC-NSGQIELAFSFLTQ----MLKRGCHPNIYTLSS 321
Query: 369 L---CRVKDVG-AAKQLILDMIAN-GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
L C ++ A L MI G P +N ++ G+ G + +AV + +E
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
G P++ TY +++G++ G ++ A I + + + V+Y ++V C+ +F EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKA-MDWETAEKLQAEMKE 528
L+ M SV ++ I+ LC +DW AEK+ +M++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW--AEKVFRQMEQ 485
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 125/293 (42%), Gaps = 4/293 (1%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ F GN A+ +F E C PN TY I + D A + KML
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ P+ +++ LC+ K KEA ++ + + ++ P + + N + L + G +
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC-DAGRLD 474
Query: 342 LALEMLKDIPGDMR-KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A ++ + + R I Y ++ L + + A L ++ G ++ +N +
Sbjct: 475 WAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTL 534
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ G G G A++++ + G PD T +I+ Y G+ E A ++L+
Sbjct: 535 LHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRR 594
Query: 461 VLSP--VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
P + Y +++ G C+ ++ + LL M +G+ S+ + LI L
Sbjct: 595 KWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFIL 647
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 9/288 (3%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
+I + Q+G + A+E+F + + F C P+ + Y+ + L + V + M
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
P+ +L LCK KV A + + KG P S ++ + E G V
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC-EVGLVKEG 235
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
E+ + + + Y A++ LC+ D A +L+ +M+ G P ++ +I
Sbjct: 236 REL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
G++ A + + RG P++YT + +V G G A + + + L
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFG-LQ 349
Query: 464 P--VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
P V Y++LV+G+C +A+ + + M++ G ++ Y LI
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 127/290 (43%), Gaps = 14/290 (4%)
Query: 242 DKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKG 301
D FE PN TY+ ++AL +++ D A + +M + PD ++ +C+
Sbjct: 175 DGFE-----PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 302 KKVKEAHAVYKAVVEKGKYPPMSSV-NFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIK 360
VKE + + ++ P+ SV N L+ L E+ A E+++++ +
Sbjct: 230 GLVKEGRELAE------RFEPVVSVYNALINGLCKEHDYKG-AFELMREMVEKGISPNVI 282
Query: 361 PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM-KL 419
Y ++ LC + A + M+ G P + ++ G G A+++ ++
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+ GL+P+V Y +V G+ + G + A + ++ + Y SL+ G+ K
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
D A+ + +M SG +V Y ++++LC + E ++ KEN
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 9/234 (3%)
Query: 330 VGKLAYENGTVPLALEMLKDIP-GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN 388
V K + VPLAL K I ++ KH + ++R L V + + L+ M
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G +F VI+ Y +VG +AVEM ++ G P V Y ++ ++
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
+ + K++ + Y+ L++ CK + D A KLL EM + G Y +I S
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 509 LC---LKAMDWETAEKLQAEMKE-----NGLYLKGVTRALIRAVKEMENEAVEP 554
+C L E AE+ + + NGL + + ++EM + + P
Sbjct: 226 MCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 3/248 (1%)
Query: 249 CVPNAETYHFTIQALY-RHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEA 307
C PN T ++ + R + FD+ +Q + P+ ++ C + +A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
+V+ + E G P + + L+ A + G++ A+ + + + Y +V
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFA-KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG-LK 426
ALCR A+ LI M P FN I G G + A ++ + +E +
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
P++ TY ++ G + +E A + E S Y++L+ G C AL+L
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 487 LTEMKDSG 494
+ +M G
Sbjct: 551 VGKMMVDG 558
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 123/246 (50%), Gaps = 11/246 (4%)
Query: 272 ASSVSQKMLDAQSIPDEEKVGDILGWLCK---GKKVKEAHAVYKAVVEKGKYPPMSSVNF 328
A + QKM+ + P+ +L L + + A V+ +V+ G + + N
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 329 LVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILD 384
LV E G + AL ML+ + + + + P Y +++A+ + + K+L+LD
Sbjct: 210 LVNGYCLE-GKLEDALGMLERMVSEFK---VNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
M NG P +N ++ GY K+G + +A ++++L++ + PD+ TY ++++G N G
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 445 MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDK 504
M ++++ K V Y++L+ G ++ EA KL+ +M++ GV+ + ++
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 505 LIQSLC 510
++ LC
Sbjct: 386 SLKWLC 391
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%), Gaps = 3/283 (1%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
VPN TY+ + + A + + M +PD ++ LC ++E
Sbjct: 272 VPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLE 331
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+ A+ P + + N L+ +E G A ++++ + D K + ++ L
Sbjct: 332 LMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWL 390
Query: 370 CRVKDVGAAKQLILDMI-ANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
C+ + A + + +++ +G P ++ +I Y KVG++ A+EMM+ + +G+K +
Sbjct: 391 CKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
T I+ +++ A +L A K ++ V Y +L+ G+ + E+ ++AL++
Sbjct: 451 TITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD 510
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
EMK + +V ++ LI LC EK E+ E+GL
Sbjct: 511 EMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD-ELAESGL 552
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 22/283 (7%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ TYH I+A + A + ++M + + IL LCK +K+ EAH +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA------LEMLKDIPGDMRKHAIKP--- 361
+ ++G F+V ++ Y GT+ + +E ++ +M+K I P
Sbjct: 474 LNSAHKRG---------FIVDEVTY--GTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Query: 362 -YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLL 420
+ +++ LC A + ++ +G P ++ FN +I GY K G + +A E
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 421 ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQF 480
KPD YT ++++G G E A + V V Y++++ +CK ++
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKL 641
Query: 481 DEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ 523
EA LL+EM++ G+ Y+ I L ET E L+
Sbjct: 642 KEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 125/293 (42%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI G+ + LEL D + + P+ TY+ I + L A + ++M +
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
++ L WLCK +K + K +V+ + P + K + G +
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
ALEM++++ K ++ ALC+ + + A L+ G + +I
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G+ + ++ +A+EM ++ + P V T+ ++ G + G+ E A + +E ++ +
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAM 514
++S++ GYCK + ++A + E + + L+ LC + M
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 350 IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANG------------------PP 391
IP + P ++VVR+L AK L++ I PP
Sbjct: 69 IPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPP 128
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSG---YSNGGEMEAA 448
P A+F+ ++ Y G+ A+++ + + LKP++ T ++ G Y + + +A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDE--YDKLI 506
R++ ++ K L+ ++ LV GYC + ++AL +L M S +++ D Y+ ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV-SEFKVNPDNVTYNTIL 247
Query: 507 QSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
+++ K + E L +MK+NGL VT
Sbjct: 248 KAMSKKGRLSDLKE-LLLDMKKNGLVPNRVT 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + + ALE++D+ + + P T++ I L H + A ++ ++
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
+PD+ I+ CK +V++A Y ++ P + N L+ L E G A
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE-GMTEKA 610
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
L + + R+ Y ++ A C+ K + A L+ +M G P +N I+
Sbjct: 611 LNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Query: 404 YSKVGEMGQAVEMMK 418
+ G++ + E++K
Sbjct: 670 LMEDGKLSETDELLK 684
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 12/205 (5%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
TY I +R + A + +M + P ++G LC K + A + +
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 315 VEKGKYPPMSSVNFLVGKLAY-ENGTVPLALEMLKDIPGDMRKHAIKP--YLA--VVRAL 369
E G P S+ N ++ L Y + G V A E + KH+ KP Y ++ L
Sbjct: 548 AESGLLPDDSTFNSII--LGYCKEGRVEKAFEFY----NESIKHSFKPDNYTCNILLNGL 601
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C+ A +I +N +I+ + K ++ +A +++ +E +GL+PD
Sbjct: 602 CKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 430 YTYAVIVSGYSNGGEMEAARKILEE 454
+TY +S G++ ++L++
Sbjct: 661 FTYNSFISLLMEDGKLSETDELLKK 685
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 181/421 (42%), Gaps = 20/421 (4%)
Query: 127 LESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWVWKENSSNVTTPVVESLVHA 186
L+S+LD L + Q+ V L R GL+ RFF+W K+ + H
Sbjct: 87 LDSALDQSGLRVSQEVVEDVLNRFR-NAGLLT--YRFFQWSEKQRHYEHSVRAY----HM 139
Query: 187 VCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDKFEF 246
+ S+ + +++ +W+L I+ + +++ A+ F+ E
Sbjct: 140 MIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMR---KYARAQKVDEAIYAFNVMEK 196
Query: 247 FQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL-GWLCKGKKVK 305
+ PN ++ + AL + A V + M D + PD + +L GW K +
Sbjct: 197 YDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGW-GKEPNLP 254
Query: 306 EAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAV 365
+A V++ +++ G +P + + + +V L + G V AL +++ + + K Y +
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILC-KAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
V + A L+M +G AVFN +I + K M ++K ++S+G+
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV--MYHSLVRGYCKMEQFDEA 483
P+ + +I+ GE + A + +K V P Y +++ +C+ ++ + A
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVF---RKMIKVCEPDADTYTMVIKMFCEKKEMETA 430
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALIRA 543
K+ M+ GV S+ + LI LC + + A L EM E G+ GVT +R
Sbjct: 431 DKVWKYMRKKGVFPSMHTFSVLINGLC-EERTTQKACVLLEEMIEMGIRPSGVTFGRLRQ 489
Query: 544 V 544
+
Sbjct: 490 L 490
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 130/297 (43%), Gaps = 19/297 (6%)
Query: 221 LNKLIFYFSQLGNGKAALELF----DKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVS 276
N L+ + N + A E+F D+F P+++TY ++ + A V
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENMRDRF-----TPDSKTYSILLEGWGKEPNLPKAREVF 260
Query: 277 QKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYE 336
++M+DA PD ++ LCK +V EA + +++ P + LV E
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 337 NGTVPLALEMLKDIPGDMRKHAIKPYLAV----VRALCRVKDVGAAKQLILDMIANGPPP 392
N LE D +M + +K +AV + A C+ + +++ +M + G P
Sbjct: 321 N-----RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP 375
Query: 393 GNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
+ N ++ + GE +A ++ + + + +PD TY +++ + EME A K+
Sbjct: 376 NSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVW 434
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ +K S + L+ G C+ +A LL EM + G+R S + +L Q L
Sbjct: 435 KYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 3/321 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI +G+ ALEL P++ TY+ + + + A V + MLD
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKG-KYPPMSSVNFLVGKLAYENGTV 340
PD +L C+ + + K ++ +G + + + ++ L + G +
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC-KTGRI 379
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
AL + + D + Y V+ LC++ A L +M P + +
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ G + G + +A ++ L S G D+ Y +++ GY+ G +E A ++ + +
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
S ++SL+ GYCK + EA K+L +K G+ SV Y L+ + + ++ +
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA-NCGNTKSID 558
Query: 521 KLQAEMKENGLYLKGVTRALI 541
+L+ EMK G+ VT ++I
Sbjct: 559 ELRREMKAEGIPPTNVTYSVI 579
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 146/349 (41%), Gaps = 24/349 (6%)
Query: 228 FSQLGNGKAALELFDKFEFFQC-------VPNAETYHFTIQALYRHSLFDSASSVSQKML 280
F+ + +G L D + F C VP+ +++ I L A ++ M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
PD + + A V + +++KG P + + L+ + G +
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC-QLGNI 343
Query: 341 PLALEMLKD-IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ L +LKD + ++I P ++ LC+ + A L M A+G P ++
Sbjct: 344 DMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSI 403
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
VI G K+G+ A+ + + + + P+ T+ ++ G G + AR +L+ +
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
L V+Y+ ++ GY K +EAL+L + ++G+ SV ++ LI C K + A
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC-KTQNIAEA 522
Query: 520 EKLQAEMKENGL------YLK--------GVTRALIRAVKEMENEAVEP 554
K+ +K GL Y G T+++ +EM+ E + P
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 137/337 (40%), Gaps = 46/337 (13%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
+I +LG AL L+D+ + +PN+ T+ + L + + A S+ ++ +
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV-GKLAYEN----- 337
D ++ K ++EA ++K V+E G P +++ N L+ G +N
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 338 ---------GTVPLAL---------------EMLKDIPGDMRKHAIKP----YLAVVRAL 369
G P + + + ++ +M+ I P Y + + L
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 370 CR------------VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
CR + KQ + DM + G PP +N +I +V + A +
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
++++SR L TY +++ G + A + ++ + LS Y +L++ +C
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAM 514
+ A+KL ++ G +S+ +Y +I LC + +
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 740
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 139/352 (39%), Gaps = 51/352 (14%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
+ G AL LF++ + P+ Y I L + FD A + +M D + +P+
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
G +L LC+ + EA ++ +++ G+ + N ++ A ++G + ALE+
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA-KSGCIEEALELF 491
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMI--------------------- 386
K + ++ + +++ C+ +++ A++ ILD+I
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARK-ILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 387 ---------------ANGPPPGNAVFNFVITGYSKVGE------------MGQAVEMMKL 419
A G PP N ++ + G + + + + ++
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+ES G+ PD TY I+ + A LE K + S Y+ L+ C
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+A + +++ V +S Y LI++ C+K D E A KL ++ G
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG-DPEMAVKLFHQLLHRGF 721
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 11/225 (4%)
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
VYK + +K ++ + V+ L + E+ + L KDI ++ + +++
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP-----SVVSFNSIMSGY 232
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C++ V AK ++ G P N +I G VG + +A+E+ + G++PD
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYCKMEQFDEALKLL 487
TY ++ G+ G + A +++ + LSP + Y L+ G C++ D L LL
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKG--LSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 488 TEMKDSGVRI-SVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+M G + S+ ++ LC K + A L +MK +GL
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLC-KTGRIDEALSLFNQMKADGL 394
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 3/321 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI +G+ ALEL P++ TY+ + + + A V + MLD
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKG-KYPPMSSVNFLVGKLAYENGTV 340
PD +L C+ + + K ++ +G + + + ++ L + G +
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC-KTGRI 379
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
AL + + D + Y V+ LC++ A L +M P + +
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ G + G + +A ++ L S G D+ Y +++ GY+ G +E A ++ + +
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
S ++SL+ GYCK + EA K+L +K G+ SV Y L+ + + ++ +
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA-NCGNTKSID 558
Query: 521 KLQAEMKENGLYLKGVTRALI 541
+L+ EMK G+ VT ++I
Sbjct: 559 ELRREMKAEGIPPTNVTYSVI 579
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 137/337 (40%), Gaps = 46/337 (13%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
+I +LG AL L+D+ + +PN+ T+ + L + + A S+ ++ +
Sbjct: 404 VIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 463
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV-GKLAYEN----- 337
D ++ K ++EA ++K V+E G P +++ N L+ G +N
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 338 ---------GTVPLAL---------------EMLKDIPGDMRKHAIKP----YLAVVRAL 369
G P + + + ++ +M+ I P Y + + L
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 370 CR------------VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
CR + KQ + DM + G PP +N +I +V + A +
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
++++SR L TY +++ G + A + ++ + LS Y +L++ +C
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAM 514
+ A+KL ++ G +S+ +Y +I LC + +
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 740
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 121/266 (45%), Gaps = 17/266 (6%)
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD-IPGDMRKHAIKPY 362
+ A V + +++KG P + + L+ + G + + L +LKD + ++I P
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQC-QLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
++ LC+ + A L M A+G P ++ VI G K+G+ A+ + +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
+ + P+ T+ ++ G G + AR +L+ + L V+Y+ ++ GY K +E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL------YLK-- 534
AL+L + ++G+ SV ++ LI C K + A K+ +K GL Y
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYC-KTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 535 ------GVTRALIRAVKEMENEAVEP 554
G T+++ +EM+ E + P
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPP 571
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 139/352 (39%), Gaps = 51/352 (14%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
+ G AL LF++ + P+ Y I L + FD A + +M D + +P+
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
G +L LC+ + EA ++ +++ G+ + N ++ A ++G + ALE+
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA-KSGCIEEALELF 491
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMI--------------------- 386
K + ++ + +++ C+ +++ A++ ILD+I
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARK-ILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 387 ---------------ANGPPPGNAVFNFVITGYSKVGE------------MGQAVEMMKL 419
A G PP N ++ + G + + + + ++
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+ES G+ PD TY I+ + A LE K + S Y+ L+ C
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+A + +++ V +S Y LI++ C+K D E A KL ++ G
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG-DPEMAVKLFHQLLHRGF 721
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 11/225 (4%)
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
VYK + +K ++ + V+ L + E+ + L KDI ++ + +++
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP-----SVVSFNSIMSGY 232
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C++ V AK ++ G P N +I G VG + +A+E+ + G++PD
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYCKMEQFDEALKLL 487
TY ++ G+ G + A +++ + LSP + Y L+ G C++ D L LL
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKG--LSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 488 TEMKDSGVRI-SVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+M G + S+ ++ LC K + A L +MK +GL
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLC-KTGRIDEALSLFNQMKADGL 394
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 137/341 (40%), Gaps = 21/341 (6%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F + G + AL+ F + PN T+ I + + A S+ ++M + +
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
++ CK +++ A +Y +VE + P S V + ++ G A++ L
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVED-RVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
+ + I Y ++ LC + A +++ DM + P +F ++ Y K
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G M AV M L RG +PDV + ++ G + G++ A K N VMY
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMY 406
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
L+ CK F E +L +++ ++G+ Y I LC K + A KL+ M
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC-KQGNLVDAFKLKTRMV 465
Query: 528 ENGLYL--------------KGVTRALIRAVKEMENEAVEP 554
+ GL L KG+ + EM N + P
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISP 506
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N ++ + +LG K A ++ F C P+ +Y+ I R+ SAS V + +
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 281 DAQSI---PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
+ PD + K K + E VY V+ K P + + + + ++
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFC-KS 176
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
G + LAL+ M++ A+ P + F
Sbjct: 177 GELQLALKSFH----SMKRDALSPNV-------------------------------VTF 201
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+I GY K G++ AV + K + + +V TY ++ G+ GEM+ A ++ +
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ + ++Y +++ G+ + D A+K L +M + G+R+ + Y +I LC
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)
Query: 314 VVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVK 373
+V +G P SS N +V + G V A +++ +P + + Y +++ CR
Sbjct: 47 LVSRGYTPHRSSFNSVVS-FVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNG 105
Query: 374 DVGAAKQLILDMIANG---PPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
D+ +A ++ + A+ P FN + G+SK+ + + M ++ + P+V
Sbjct: 106 DIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVV 164
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYCKMEQFDEALKLLT 488
TY+ + + GE++ A K K++ LSP V + L+ GYCK + A+ L
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRD--ALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
EM+ + ++V Y LI C K + + AE++ + M E+
Sbjct: 223 EMRRVRMSLNVVTYTALIDGFCKKG-EMQRAEEMYSRMVED 262
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 287 DEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM 346
+ E + +L LCK K+V++A V + + P + N + N V AL
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKAN-RVEEALWT 246
Query: 347 LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
++++ G + + Y ++R C+ + +++ +M ANG PP + + +++ +
Sbjct: 247 IQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNA 306
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE-EAKKNHSVLSPV 465
E +A+ + ++ G KPD Y ++ + G +E A ++ E + ++
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTS 366
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGV-RISVDEYDKLIQSLCLKAMDWETAEKLQA 524
Y+S++ YC ++ D+A++LL EM+ S + V Y L++S C K D KL
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS-CFKRGDVVEVGKLLK 425
Query: 525 EM 526
EM
Sbjct: 426 EM 427
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 141/343 (41%), Gaps = 41/343 (11%)
Query: 223 KLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDA 282
K++ F+ G + A+ +FD+ F N E+ + + L + + A V + L +
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKS 218
Query: 283 QSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLA-------- 334
P+ + CK +V+EA + + G P + S ++
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV 278
Query: 335 YE-------NGTVPLAL----------------EMLKDIPGDMRKHAIKP----YLAVVR 367
YE NG+ P ++ E L+ + M++ KP Y ++
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR-VATRMKRSGCKPDSLFYNCLIH 337
Query: 368 ALCRVKDVGAAKQLI-LDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL- 425
L R + A+++ ++M G + +N +I Y E +A+E++K +ES L
Sbjct: 338 TLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC 397
Query: 426 KPDVYTYA-VIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
PDV+TY ++ S + G +E + + E K+H L Y L++ C+ + A
Sbjct: 398 NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAY 457
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
L EM + L++ + K M E+AE+++ MK
Sbjct: 458 CLFEEMISQDITPRHRTCLLLLEEVKKKNMH-ESAERIEHIMK 499
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 287 DEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM 346
+ E + +L LCK K+V++A V + + P + N + N V AL
Sbjct: 189 NTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKAN-RVEEALWT 246
Query: 347 LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
++++ G + + Y ++R C+ + +++ +M ANG PP + + +++ +
Sbjct: 247 IQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNA 306
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE-EAKKNHSVLSPV 465
E +A+ + ++ G KPD Y ++ + G +E A ++ E + ++
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTS 366
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGV-RISVDEYDKLIQSLCLKAMDWETAEKLQA 524
Y+S++ YC ++ D+A++LL EM+ S + V Y L++S C K D KL
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS-CFKRGDVVEVGKLLK 425
Query: 525 EM 526
EM
Sbjct: 426 EM 427
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 141/343 (41%), Gaps = 41/343 (11%)
Query: 223 KLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDA 282
K++ F+ G + A+ +FD+ F N E+ + + L + + A V + L +
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKS 218
Query: 283 QSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLA-------- 334
P+ + CK +V+EA + + G P + S ++
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV 278
Query: 335 YE-------NGTVPLAL----------------EMLKDIPGDMRKHAIKP----YLAVVR 367
YE NG+ P ++ E L+ + M++ KP Y ++
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR-VATRMKRSGCKPDSLFYNCLIH 337
Query: 368 ALCRVKDVGAAKQLI-LDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL- 425
L R + A+++ ++M G + +N +I Y E +A+E++K +ES L
Sbjct: 338 TLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC 397
Query: 426 KPDVYTYA-VIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
PDV+TY ++ S + G +E + + E K+H L Y L++ C+ + A
Sbjct: 398 NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAY 457
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
L EM + L++ + K M E+AE+++ MK
Sbjct: 458 CLFEEMISQDITPRHRTCLLLLEEVKKKNMH-ESAERIEHIMK 499
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 306 EAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAV 365
EA + +VE G P + ++ L+ L + V A E G + K Y +
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLC-DKKHVNHAQEFFGKAKGFGIVPSAKTYSIL 214
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
VR R++D A+++ +M+ +N ++ K G++ +M + + + GL
Sbjct: 215 VRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL 274
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
KPD Y++A+ + Y + G++ +A K+L+ K+ V + ++ +++ CK E+ D+A
Sbjct: 275 KPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYL 334
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLC 510
LL EM G Y+ ++ C
Sbjct: 335 LLDEMIQKGANPDTWTYNSIMAYHC 359
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 133/312 (42%), Gaps = 18/312 (5%)
Query: 231 LGNGKAALELFD------KFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQS 284
LG+ K L+D ++ +F+ +++ + +A R +L A +M++
Sbjct: 112 LGSSKQFALLWDFLIEAREYNYFEI--SSKVFWIVFRAYSRANLPSEACRAFNRMVEFGI 169
Query: 285 IPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV---GKLAYENGTVP 341
P + + +L LC K V A + G P + + LV ++ +G
Sbjct: 170 KPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARK 229
Query: 342 LALEML-KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
+ EML ++ D+ Y A++ ALC+ DV ++ +M G P F
Sbjct: 230 VFDEMLERNCVVDLL-----AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIF 284
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I Y G++ A +++ ++ L P+VYT+ I+ +++ A +L+E + +
Sbjct: 285 IHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA 344
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
Y+S++ +C + + A KLL+ M + Y+ ++ L ++ ++ A
Sbjct: 345 NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYN-MVLKLLIRIGRFDRAT 403
Query: 521 KLQAEMKENGLY 532
++ M E Y
Sbjct: 404 EIWEGMSERKFY 415
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 121/322 (37%), Gaps = 36/322 (11%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
L++L+ + A E F K + F VP+A+TY ++ R A V +ML
Sbjct: 176 LDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEML 235
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ + D +L LCK V + +++ + G P S
Sbjct: 236 ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS--------------- 280
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
+ + A C DV +A +++ M P FN +
Sbjct: 281 ---------------------FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I K ++ A ++ + +G PD +TY I++ + + E+ A K+L +
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKC 379
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
+ Y+ +++ ++ +FD A ++ M + +V Y +I L K E A
Sbjct: 380 LPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC 439
Query: 521 KLQAEMKENGLYLKGVTRALIR 542
+ M + G+ T ++R
Sbjct: 440 RYFEMMIDEGIPPYSTTVEMLR 461
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 159/375 (42%), Gaps = 54/375 (14%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LIF F + G A++L + VP+ TY ++ L + A + Q +LD
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Query: 284 S------IPD----EEKVGDILG-------------------WLCKGKKVKEAHAVYKAV 314
I D E KV +LG LC + A + + +
Sbjct: 444 CGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKM 503
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLA-----LEMLKDIPGDMRKHAIKPYLAVVRAL 369
V G P S N ++ L EN LA ++ L +P + YL VV L
Sbjct: 504 VNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD------VDTYLIVVNEL 557
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM-KLLESRGLKPD 428
C+ D AA +I M G P A+++ +I K G + +A E K+LES G++PD
Sbjct: 558 CKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES-GIQPD 616
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
Y ++++ Y+ G ++ A +++EE K+ S Y L+ G+ KM ++ + L
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLD 676
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL---------YLKGVTRA 539
+M + G+ +V Y LI LK D++ + L M EN + L G+ RA
Sbjct: 677 KMLEDGLSPNVVLYTALIGHF-LKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Query: 540 LIRAVKEMENEAVEP 554
+ R K+ VEP
Sbjct: 736 MAR--KKKRQVIVEP 748
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P++ TY I + + + KML+ P+ ++G K K + +
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Query: 311 YKAVVEKG-KYPPMSSVNFLVG-----------KLAYENGTVPLALEMLK-----DIPGD 353
+ + E K+ ++ + L G ++ E G L +++ IP
Sbjct: 710 FGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSS 769
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ + K + V +G K+ I+ P + N +ITGY G + +A
Sbjct: 770 LGNYGSKSFAMEV--------IGKVKKSII--------PNLYLHNTIITGYCAAGRLDEA 813
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
++ ++ G+ P++ TY +++ + G++E+A + E VMY +L++G
Sbjct: 814 YNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEPD---QVMYSTLLKG 870
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
C ++ +AL L+ EM+ SG+ + D Y+KL+Q LC + E +
Sbjct: 871 LCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVK 917
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y +++ C+ ++ A +L L M+ +FN +I G+ K+G + + M +
Sbjct: 275 YTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMI 334
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV-MYHSLVRGYCKMEQF 480
+G++ +V+TY +++ Y G ++ A ++ + + V Y +L+ G+ K
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 481 DEALKLLTEMKDSGV 495
D+A+ LL M D+G+
Sbjct: 395 DKAVDLLMRMLDNGI 409
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 111/290 (38%), Gaps = 4/290 (1%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
VP++ + L + FD A + +++ + P ++ LC + EA
Sbjct: 128 VPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFH 187
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKH-AIKPYLAVVRA 368
++ V E+G + L L +G + A+ ML + G R + Y ++
Sbjct: 188 CFEQVKERGSGLWLWCCKRLFKGLC-GHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYC 246
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
C+ A+ L M +G ++ ++ Y K M A+ + + R + D
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
+ ++ G+ G ++ R + + K + YH ++ YCK D AL+L
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFV 366
Query: 489 EMKDS-GVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
S + +V Y LI K + A L M +NG+ +T
Sbjct: 367 NNTGSEDISRNVHCYTNLIFGF-YKKGGMDKAVDLLMRMLDNGIVPDHIT 415
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 129/305 (42%), Gaps = 11/305 (3%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKK-VKEAHAV 310
E + + I+ L + S KML+ P + + IL L + +++A +
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVV 366
+K+ G P S N L+ N + +A ++ G M + + P Y ++
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCL-NDDLSIAYQLF----GKMLERDVVPDVDSYKILI 232
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+ CR V A +L+ DM+ G P + ++ + ++ +A +++ ++ +G
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
PD+ Y ++ G+ ARK+L++ N + V Y +L+ G C FDE K
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALIRAVKE 546
L EM G + L++ C E + ++ MK NG L T ++ +
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK-NGETLHSDTWEMVIPLIC 411
Query: 547 MENEA 551
E+E+
Sbjct: 412 NEDES 416
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 11/274 (4%)
Query: 221 LNKLI-FYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
LN+++ S G + A ELF +PN +Y+ +QA + A + KM
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
L+ +PD + ++ C+ +V A + ++ KG P S L+ L +
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT-- 274
Query: 340 VPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
L + M+ P Y ++ CR A++++ DM++NG P +
Sbjct: 275 ---QLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSV 331
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+ +I G G + + ++ + S+G P +V G+ + G++E A ++E
Sbjct: 332 SYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVV 391
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
KN L + ++ C E E +KL E
Sbjct: 392 MKNGETLHSDTWEMVIPLICN-EDESEKIKLFLE 424
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A +LF K VP+ ++Y IQ R + A + ML+ +PD +L
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
LC+ +++EA+ + + KG P + N ++ E+ + + + DM
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA-----RKVLDDMLS 323
Query: 357 HAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
+ P Y ++ LC K+ + +MI+ G P +V N ++ G+ G++ +
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
A ++++++ G T+ +++ N E E + LE+A K
Sbjct: 384 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVK 428
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+ IK Y ++ + + R AK+ M++ G P +N ++ G+ + A+
Sbjct: 217 ERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALR 276
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
+ +++RG+ PD T+ +++G+ +M+ A K+ E K N S V Y ++++GY
Sbjct: 277 FFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL 336
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM------KEN 529
+++ D+ L++ EM+ SG+ + Y L+ LC E L+ M K+N
Sbjct: 337 AVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN 396
Query: 530 GLYLK 534
++LK
Sbjct: 397 SIFLK 401
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 82/187 (43%), Gaps = 35/187 (18%)
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+H ++ +++ L V + A+ ++LDM G P +F +I Y K G + ++V+
Sbjct: 147 RHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVK 206
Query: 416 MMKLLE-----------------------------------SRGLKPDVYTYAVIVSGYS 440
+ + ++ S G++P +TY +++ G+
Sbjct: 207 IFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFF 266
Query: 441 NGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVD 500
+E A + E+ K +++++ G+C+ ++ DEA KL EMK + + SV
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVV 326
Query: 501 EYDKLIQ 507
Y +I+
Sbjct: 327 SYTTMIK 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 116/291 (39%), Gaps = 24/291 (8%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L + G A F+K P TY+ + + ++A + M
Sbjct: 224 NSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKT 283
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD+ ++ C+ KK+ EA ++ V KG S V++ Y
Sbjct: 284 RGISPDDATFNTMINGFCRFKKMDEAEKLF--VEMKGNKIGPSVVSYTTMIKGY------ 335
Query: 342 LALEMLKD---IPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANG-PPPG 393
LA++ + D I +MR I+P Y ++ LC + AK ++ +M+A P
Sbjct: 336 LAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKD 395
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
N++F ++ SK G+M A E++K + + + + Y V++ A K+L+
Sbjct: 396 NSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLD 455
Query: 454 EAKKNHSVL--------SPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
+ +L P Y+ ++ C Q +A L ++ GV+
Sbjct: 456 TLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 143/343 (41%), Gaps = 41/343 (11%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN LI F ++G A+ L + TY+ I L H L D A +M+
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRVI---SIDTVTYNTVISGLCEHGLADEAYQFLSEMV 188
Query: 281 DAQSIPDEEKVGDILGWLCK-GKKVK------------------------EAHAV---YK 312
+PD ++ CK G V+ HA+ Y+
Sbjct: 189 KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYR 248
Query: 313 AVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRA 368
+V G P + + + ++ +L + G V +L++ M + ++ P Y +V +
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLC-KGGKVLEGGLLLRE----MEEMSVYPNHVTYTTLVDS 303
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
L + A L M+ G P V+ ++ G K G++ +A + K+L P+
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
V TY +V G G++ +A I+ + + + + V Y S++ GY K +EA+ LL
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+M+D V + Y +I L KA E A +L EM+ G+
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGL-FKAGKEEMAIELSKEMRLIGV 465
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 128/317 (40%), Gaps = 20/317 (6%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G+ + L+L+DK + P+ + + + L + + A + +M+ + P+
Sbjct: 587 GDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
L K K+ ++ ++ G N L+ L T A+ M
Sbjct: 647 RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVM----- 701
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILD----MIANGPPPGNAVFNFVITGYSKV 407
GDM P +L VG+ + L M+ G P A +N +I G S
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G + + + + ++SRG++PD +TY ++SG + G M+ + I E + V Y
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTY 821
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC-----------LKAMDW 516
+ L+ + + + +A +LL EM GV + Y +I LC KAM
Sbjct: 822 NVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYL 881
Query: 517 ETAEKLQAEMKENGLYL 533
A+ L EM E Y+
Sbjct: 882 AEAKGLLKEMVEEKGYI 898
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
MIA G P N +I + KVG + A+ LL +R + D TY ++SG G
Sbjct: 120 MIACGVSPDVFALNVLIHSFCKVGRLSFAIS---LLRNRVISIDTVTYNTVISGLCEHGL 176
Query: 445 MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKD 492
+ A + L E K + V Y++L+ G+CK+ F A L+ E+ +
Sbjct: 177 ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
VPN TY + L + SA + +ML+ IP+ ++ K ++EA +
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 420
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP--YL--AV 365
+ + + ++ P + ++ L ++ G +A+E+ K+ MR ++ Y+ A+
Sbjct: 421 LLRKMEDQNVVPNGFTYGTVIDGL-FKAGKEEMAIELSKE----MRLIGVEENNYILDAL 475
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
V L R+ + K L+ DM++ G + +I + K G+ A+ + ++ RG+
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 426 KPDVYTYAVIVSGYSNGGEMEA--ARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
DV +Y V++SG G++ A A K + E + + ++ ++ K +
Sbjct: 536 PWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIAT---FNIMMNSQRKQGDSEGI 592
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLC 510
LKL +MK G++ S+ + ++ LC
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLC 619
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 15/307 (4%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+ L K E VPN TY I L++ + A +S++M + + ++
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477
Query: 297 WLCKGKKVKEAHAVYKAVVEKG------KYPPMSSVNFLVGKLAYENGTVPLALEMLKDI 350
L + ++KE + K +V KG Y + V F G E + +
Sbjct: 478 HLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE--RGM 535
Query: 351 PGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
P D + Y ++ + + VGA M G P A FN ++ K G+
Sbjct: 536 PWD-----VVSYNVLISGMLKFGKVGA-DWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSL 470
+++ ++S G+KP + + ++V G+ME A IL + + Y
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+ K ++ D K + G+++S Y+ LI +LC M + A + +M+ G
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMT-KKAAMVMGDMEARG 708
Query: 531 LYLKGVT 537
VT
Sbjct: 709 FIPDTVT 715
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 8/291 (2%)
Query: 249 CVPNAETYHFTIQALYRHS-LFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEA 307
CV + Y ++ Y ++ LF + + Q M P +L L K + A
Sbjct: 133 CVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMA 192
Query: 308 HAVYKAVVEK-GKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVV 366
H ++ + G P + N L+ +N V A + KD+ + Y ++
Sbjct: 193 HDLFDEMRRTYGVTPDSYTFNTLINGFC-KNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 367 RALCRVKDVGAAKQLILDMI--ANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
LCR V A ++ M+ A P + ++ GY E+ +AV + + SRG
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYCKMEQFDE 482
LKP+ TY ++ G S + + IL + +P ++ L++ +C D
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYL 533
A+K+ EM + + Y LI++LC++ +++ AE L E+ E + L
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRN-EFDRAETLFNELFEKEVLL 421
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 125/296 (42%), Gaps = 42/296 (14%)
Query: 242 DKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKG 301
D F F P+A T++ I+A D+A V Q+ML+ + PD ++ LC
Sbjct: 344 DAFTTF--APDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMR 401
Query: 302 KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP 361
+ A ++ + EK L+GK + PLA
Sbjct: 402 NEFDRAETLFNELFEK---------EVLLGK----DECKPLA----------------AA 432
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANG--PPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
Y + LC A+++ ++ G PP + +ITG+ + G+ A E++ L
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPS---YKTLITGHCREGKFKPAYELLVL 489
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+ R PD+ TY +++ G GE A L+ ++ + +HS++ K +
Sbjct: 490 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 549
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKG 535
+E+ L+T M + +R ++D ++++ L + +A+K +A + LY G
Sbjct: 550 ANESFCLVTLMLEKRIRQNIDLSTQVVRLL------FSSAQKEKAFLIVRLLYDNG 599
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 120/304 (39%), Gaps = 21/304 (6%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI F + A +F E + C P+ TY+ I L R A +V ML
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 281 DAQS--IPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
+ P+ ++ C +++ EA V+ ++ +G P + N L+ L+ +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH- 330
Query: 339 TVPLALEMLKD--IPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPP 392
+ +KD I G+ P + +++A C + AA ++ +M+ P
Sbjct: 331 ----RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 393 GNAVFNFVITGYSKVGEMGQAVEMMK-------LLESRGLKPDVYTYAVIVSGYSNGGEM 445
+A ++ +I E +A + LL KP Y + G+
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKT 446
Query: 446 EAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKL 505
+ A K+ + K V P Y +L+ G+C+ +F A +LL M ++ Y+ L
Sbjct: 447 KQAEKVFRQLMK-RGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELL 505
Query: 506 IQSL 509
I L
Sbjct: 506 IDGL 509
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 1/267 (0%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+A+ F ++ R+ + D A + + ++ V +L L +V +
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ G P S + V + G V AL+ + + + I V++ L
Sbjct: 205 DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-S 263
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
V + A +L+ ++ GP P F +I G+ K GEM +A ++ K++E RG++PD+
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y+ ++ GY G + K+ +A L V++ S + Y K A + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 492 DSGVRISVDEYDKLIQSLCLKAMDWET 518
G+ +V Y LI+ LC +E
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEA 410
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 138/326 (42%), Gaps = 14/326 (4%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
+ LI F + GN ++ L++ P+ Y + L + L A S KML
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML- 488
Query: 282 AQSIPDEEKVGDIL--GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
QSI V + L GW C+ + EA V++ + G P +++ V +++ G
Sbjct: 489 GQSIRLNVVVFNSLIDGW-CRLNRFDEALKVFRLMGIYGIKPDVATFT-TVMRVSIMEGR 546
Query: 340 VPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
+ AL + M K ++P Y ++ A C+ QL M N A
Sbjct: 547 LEEALFLFFR----MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
V N VI K + A + L ++PD+ TY ++ GY + ++ A +I E
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
K + V L+ CK D A+++ + M + G + + Y L+ K++D
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS-KSVD 721
Query: 516 WETAEKLQAEMKENGLYLKGVTRALI 541
E + KL EM+E G+ V+ ++I
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSII 747
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 3/258 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN T+ I + D A + + M PD ++ K + H +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAY-ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+ + KG + V F Y ++G + A + K + + Y +++ L
Sbjct: 344 FSQALHKG--VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C+ + A + ++ G P ++ +I G+ K G + + + + G PDV
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
Y V+V G S G M A + + L+ V+++SL+ G+C++ +FDEALK+
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 490 MKDSGVRISVDEYDKLIQ 507
M G++ V + +++
Sbjct: 522 MGIYGIKPDVATFTTVMR 539
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 107/260 (41%), Gaps = 36/260 (13%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
L+LFD + + + + I L++ + AS +++ + PD ++
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
C +++ EA +++ + K P + TV L +
Sbjct: 645 GYCSLRRLDEAERIFELL----KVTP------------FGPNTVTLTI------------ 676
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
++ LC+ D+ A ++ M G P + ++ +SK ++ + ++
Sbjct: 677 --------LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ ++ +G+ P + +Y++I+ G G ++ A I +A + V Y L+RGYCK
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 477 MEQFDEALKLLTEMKDSGVR 496
+ + EA L M +GV+
Sbjct: 789 VGRLVEAALLYEHMLRNGVK 808
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 272 ASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVG 331
AS + +LD P+ ++ CK ++ A ++K + ++G P + + + L+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 332 KLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP 391
++ G + + ++ K + + + + + D+ A + M+ G
Sbjct: 330 GY-FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P + +I G + G + +A M + RG++P + TY+ ++ G+ G + + +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
E+ K V+Y LV G K A++ +M +R++V ++ LI C
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 129/314 (41%), Gaps = 4/314 (1%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
+ N LI + +L AL++F + P+ T+ ++ + A + +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M PD ++ CK K ++ ++++ K +V +V L ++
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD-LMQRNKISADIAVCNVVIHLLFKCH 615
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGP-PPGNAVF 397
+ A + ++ + I Y ++ C ++ + A++ I +++ P P
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER-IFELLKVTPFGPNTVTL 674
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+I K +M A+ M ++ +G KP+ TY ++ +S ++E + K+ EE ++
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
S V Y ++ G CK + DEA + + D+ + V Y LI+ C K
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC-KVGRLV 793
Query: 518 TAEKLQAEMKENGL 531
A L M NG+
Sbjct: 794 EAALLYEHMLRNGV 807
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 1/267 (0%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+A+ F ++ R+ + D A + + ++ V +L L +V +
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ G P S + V + G V AL+ + + + I V++ L
Sbjct: 205 DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-S 263
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
V + A +L+ ++ GP P F +I G+ K GEM +A ++ K++E RG++PD+
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y+ ++ GY G + K+ +A L V++ S + Y K A + M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 492 DSGVRISVDEYDKLIQSLCLKAMDWET 518
G+ +V Y LI+ LC +E
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEA 410
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 3/258 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN T+ I + D A + + M PD ++ K + H +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAY-ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+ + KG + V F Y ++G + A + K + + Y +++ L
Sbjct: 344 FSQALHKG--VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C+ + A + ++ G P ++ +I G+ K G + + + + G PDV
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
Y V+V G S G M A + + L+ V+++SL+ G+C++ +FDEALK+
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 490 MKDSGVRISVDEYDKLIQ 507
M G++ V + +++
Sbjct: 522 MGIYGIKPDVATFTTVMR 539
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 107/260 (41%), Gaps = 36/260 (13%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
L+LFD + + + + I L++ + AS +++ + PD ++
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
C +++ EA +++ + K P + TV L +
Sbjct: 616 GYCSLRRLDEAERIFELL----KVTP------------FGPNTVTLTI------------ 647
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
++ LC+ D+ A ++ M G P + ++ +SK ++ + ++
Sbjct: 648 --------LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ ++ +G+ P + +Y++I+ G G ++ A I +A + V Y L+RGYCK
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 477 MEQFDEALKLLTEMKDSGVR 496
+ + EA L M +GV+
Sbjct: 760 VGRLVEAALLYEHMLRNGVK 779
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 272 ASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVG 331
AS + +LD P+ ++ CK ++ A ++K + ++G P + + + L+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 332 KLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP 391
++ G + + ++ K + + + + + D+ A + M+ G
Sbjct: 330 GY-FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P + +I G + G + +A M + RG++P + TY+ ++ G+ G + + +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
E+ K V+Y LV G K A++ +M +R++V ++ LI C
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 21/302 (6%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
+ LI F + GN ++ L++ P+ Y + L + L A S KML
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML- 488
Query: 282 AQSIPDEEKVGDIL--GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG- 338
QSI V + L GW C+ + EA V++ + G P +++ ++ E+
Sbjct: 489 GQSIRLNVVVFNSLIDGW-CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF 547
Query: 339 ------TVPLALEMLKDIPGDMRKHAIKPYLAV----VRALCRVKDVGAAKQLILDMIAN 388
T+ L L L M+++ I +AV + L + + A + ++I
Sbjct: 548 CKHMKPTIGLQLFDL------MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 601
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
P +N +I GY + + +A + +LL+ P+ T +++ +M+ A
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 661
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
++ + S + V Y L+ + K + + KL EM++ G+ S+ Y +I
Sbjct: 662 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Query: 509 LC 510
LC
Sbjct: 722 LC 723
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 121/253 (47%), Gaps = 15/253 (5%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIP---DEEKVGDILGWLCKGKKVKEA 307
P+A TY ++ F A V + +LD + P D++ ++ K ++A
Sbjct: 214 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 273
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YL 363
V+ ++V KG P S+V + +++E + + + I M++ I+P Y
Sbjct: 274 RKVFSSMVGKG--VPQSTVTY-NSLMSFET-----SYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
+++A R + A + +M+ G P + +N ++ ++ G + QA + K +
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
+ PD+++Y ++S Y N +ME A K + K + + V Y +L++GY K ++
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 484 LKLLTEMKDSGVR 496
+++ +M+ SG++
Sbjct: 446 MEVYEKMRLSGIK 458
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 3/232 (1%)
Query: 235 KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI 294
K +++D+ + P+ +Y I+A R + A SV ++MLDA P + +
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT-VPLALEMLKDIPGD 353
L V++A V+K++ +P + S ++ AY N + + A + K I D
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS--AYVNASDMEGAEKFFKRIKVD 420
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ I Y +++ + DV ++ M +G + ++ + G A
Sbjct: 421 GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 480
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
+ K +ES G+ PD V++S S E+E A+++ + ++++ V
Sbjct: 481 LGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARV 532
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 116/284 (40%), Gaps = 53/284 (18%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPP---MSSVNFLV-----GKLAYENGT--VPLA 343
+LG L + K++K+ + V ++E +Y S ++FL+ GKL NG V
Sbjct: 113 VLGTLVRFKQLKKWNLV-SEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSV 171
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
L + P + Y A++ + R A+ + M ++GP P + ++
Sbjct: 172 LSKMGSTPN------VISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKT 225
Query: 404 YSKVGEMGQAVEMMKLL---ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ + + +A E+ + L + LKPD Y +++ Y G E ARK+
Sbjct: 226 FVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV 285
Query: 461 VLSPVMYHSL--------------------------------VRGYCKMEQFDEALKLLT 488
S V Y+SL ++ Y + + +EAL +
Sbjct: 286 PQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFE 345
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
EM D+GVR + Y+ L+ + + M E A+ + M+ + ++
Sbjct: 346 EMLDAGVRPTHKAYNILLDAFAISGM-VEQAKTVFKSMRRDRIF 388
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
F +IT Y K+G A ++ +L G P+V +Y ++ Y GG+ A I +
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEA---LKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
+ S + Y +++ + + ++F EA + L + K S ++ Y +I + KA
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY-MYKKA 267
Query: 514 MDWETAEKLQAEMKENGLYLKGVT 537
++E A K+ + M G+ VT
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVT 291
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 129/276 (46%), Gaps = 15/276 (5%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIP- 286
+ + G A +F + + P+A TY ++ F A V + +LD + P
Sbjct: 184 YGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPL 243
Query: 287 --DEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLAL 344
D++ ++ K ++A V+ ++V KG P S+V + +++E +
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG--VPQSTVTY-NSLMSFET-----SY 295
Query: 345 EMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
+ + I M++ I+P Y +++A R + A + +M+ G P + +N +
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ ++ G + QA + K + + PD+++Y ++S Y N +ME A K + K +
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
+ V Y +L++GY K ++ +++ +M+ SG++
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 3/232 (1%)
Query: 235 KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI 294
K +++D+ + P+ +Y I+A R + A SV ++MLDA P + +
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT-VPLALEMLKDIPGD 353
L V++A V+K++ +P + S ++ AY N + + A + K I D
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS--AYVNASDMEGAEKFFKRIKVD 413
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ I Y +++ + DV ++ M +G + ++ + G A
Sbjct: 414 GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 473
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
+ K +ES G+ PD V++S S E+E A+++ + ++++ V
Sbjct: 474 LGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARV 525
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 116/284 (40%), Gaps = 53/284 (18%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPP---MSSVNFLV-----GKLAYENGT--VPLA 343
+LG L + K++K+ + V ++E +Y S ++FL+ GKL NG V
Sbjct: 106 VLGTLVRFKQLKKWNLV-SEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSV 164
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
L + P + Y A++ + R A+ + M ++GP P + ++
Sbjct: 165 LSKMGSTPN------VISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKT 218
Query: 404 YSKVGEMGQAVEMMKLL---ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ + + +A E+ + L + LKPD Y +++ Y G E ARK+
Sbjct: 219 FVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV 278
Query: 461 VLSPVMYHSL--------------------------------VRGYCKMEQFDEALKLLT 488
S V Y+SL ++ Y + + +EAL +
Sbjct: 279 PQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFE 338
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
EM D+GVR + Y+ L+ + + M E A+ + M+ + ++
Sbjct: 339 EMLDAGVRPTHKAYNILLDAFAISGM-VEQAKTVFKSMRRDRIF 381
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
F +IT Y K+G A ++ +L G P+V +Y ++ Y GG+ A I +
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEA---LKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
+ S + Y +++ + + ++F EA + L + K S ++ Y +I + KA
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY-MYKKA 260
Query: 514 MDWETAEKLQAEMKENGLYLKGVT 537
++E A K+ + M G+ VT
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVT 284
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 116/262 (44%), Gaps = 7/262 (2%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+ ET + + L + A + + M +P +++ L + ++ +A +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ +V G P + N ++G L + G + AL +L+D+ + Y V+R +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLC-KKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCM-- 219
Query: 372 VKDVGAAKQLIL---DMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
D G A+Q I D + NG PP + ++ + +A+E+++ + G PD
Sbjct: 220 -FDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPD 278
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
+ TY +V+ G +E +++ + L+ V Y++L+ C E +DE ++L
Sbjct: 279 IVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILN 338
Query: 489 EMKDSGVRISVDEYDKLIQSLC 510
M + +V Y+ LI LC
Sbjct: 339 IMYQTSYCPTVITYNILINGLC 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 138/331 (41%), Gaps = 11/331 (3%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I GN + A+ + C P TY ++ + R+ A V + M
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV 272
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD ++ + C+ ++E +V + ++ G + N L+ L
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE---- 328
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
+ +++I M + + P Y ++ LC+ + + A M+ P +
Sbjct: 329 -YWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY 387
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N V+ SK G + A+E++ LL++ P + TY ++ G + G M+ A ++ +
Sbjct: 388 NTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLD 447
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
+ SL+ G+C+ +EA ++L E + G I Y +IQ LC K + E
Sbjct: 448 AGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLC-KKKEIE 506
Query: 518 TAEKLQAEMKENGLYL-KGVTRALIRAVKEM 547
A ++ M G + + A+++ V+EM
Sbjct: 507 MAIEVVEIMLTGGCKPDETIYTAIVKGVEEM 537
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
P TY+ I L + L A +ML+ + +PD +LG + K V +A
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDI------PGDMRKHAIKPYL 363
+ + P + + N ++ LA + G + ALE+ + P D+ + ++
Sbjct: 406 LLGLLKNTCCPPGLITYNSVIDGLA-KKGLMKKALELYHQMLDAGIFPDDITRRSL---- 460
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
+ CR V A Q++ + G + + VI G K E+ A+E+++++ +
Sbjct: 461 --IYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTG 518
Query: 424 GLKPDVYTYAVIVSGYSNGG 443
G KPD Y IV G G
Sbjct: 519 GCKPDETIYTAIVKGVEEMG 538
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 5/188 (2%)
Query: 354 MRKHAIKPYLA----VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
M +H P+ +VR L R+ + A ++ M+ +G P +N +I K G
Sbjct: 130 MARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGH 189
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+ A+ +++ + G PDV TY ++ + G E A + ++ +N + Y
Sbjct: 190 IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTV 249
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
LV C+ A+++L +M G + Y+ L+ C + E A +Q + +
Sbjct: 250 LVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQ-HILSH 308
Query: 530 GLYLKGVT 537
GL L VT
Sbjct: 309 GLELNTVT 316
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 2/313 (0%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F++ G KA L D+ A T++ I + L A K P
Sbjct: 159 FAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPF 218
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
+ IL L K+ K VYK ++E G P + + N L+ Y G + +
Sbjct: 219 KHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT-NYRLGKMDRFDRLF 277
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
++ D Y ++ L + AA + M G P + +I G S+
Sbjct: 278 DEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRA 337
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G + + + G +PDV Y V+++GY GE++ A+++ E + + Y
Sbjct: 338 GNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY 397
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
+S++RG C +F EA LL EM+ G + Y L+ L KA A K+ EM
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL-RKAGKLSEARKVIREMV 456
Query: 528 ENGLYLKGVTRAL 540
+ G Y+ V + +
Sbjct: 457 KKGHYVHLVPKMM 469
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI + G K A+ F K + F P +Y+ + +L + V ++ML
Sbjct: 187 FNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML 246
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ PD +L + K+ ++ + G P + N L+ L G
Sbjct: 247 EDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG--KGNK 304
Query: 341 PLA----LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
PLA L +K++ D ++ Y ++ L R ++ A K + +M+ G P
Sbjct: 305 PLAALTTLNHMKEVGID---PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+ +ITGY GE+ +A EM + + +G P+V+TY ++ G GE A +L+E +
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
+ V+Y +LV K + EA K++ EM G
Sbjct: 422 SRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 144/331 (43%), Gaps = 26/331 (7%)
Query: 231 LGNGK---AALELFDKFEFFQCVPNAETYHFTIQALYRHS---LFDSASSVSQKMLDAQS 284
L GK A+++F + C PN TY + L D +S++ + Q
Sbjct: 315 LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM-TQG 373
Query: 285 IPDEEKVGDILGWLCKGKKVKEAHAVYKAV----VEKGKYPPMSSVNFLVGKLAYENGTV 340
I ++ L K V EAH ++ + V+ + MS + L G G
Sbjct: 374 I-----YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA-----GKT 423
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+EML I Y V AL ++K + L M +GP P +N +
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I + +VGE+ +A+ + + LE KPD+ +Y +++ G+++ A +E ++
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
V Y +L+ + K E+ + A L EM G + ++ Y+ L+ CL+ + TAE
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD--CLEK-NGRTAE 600
Query: 521 --KLQAEMKENGLYLKGVTRALIRAVKEMEN 549
L ++MK+ GL +T ++ ++ + +
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVLERLQSVSH 631
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 126/294 (42%), Gaps = 2/294 (0%)
Query: 238 LELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGW 297
L LF + P+ TY+ + A L D A V + M D +PD ++
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 298 LCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKH 357
K +++++ + + G P ++S N L+ A ++G++ A+ + +
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA-KSGSIKEAMGVFHQMQAAGCTP 350
Query: 358 AIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
Y ++ + +QL L+M ++ P A +N +I + + G + V +
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
+ ++PD+ TY I+ GG E ARKIL+ N V S Y ++ + +
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
++EAL M + G S++ + L+ S + E+ E + + + ++G+
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKES-EAILSRLVDSGI 523
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 129/309 (41%), Gaps = 40/309 (12%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
T N L+ +++ G+ K A+ +F + + C PNA TY + + +D + +
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSS---VNFLVGK--- 332
M + + PD ++ +G KE ++ +VE+ P M + + F GK
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 333 -------LAY--ENGTVP----------------------LALEMLKDIPGDMRKHAIKP 361
L Y N VP +A + ++ + +I+
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN---PSIET 494
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
+ +++ + R V ++ ++ ++ +G P FN I Y + G+ +AV+ +E
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
PD T ++S YS ++ R+ EE K + + S + Y ++ Y K E++D
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWD 614
Query: 482 EALKLLTEM 490
+ +LL EM
Sbjct: 615 DVNELLEEM 623
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESR-GLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
F V ++ G+ +++ + K ++ + KP+ + Y +++S G ++ ++ +E
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
S Y +L+ Y + +++ +L+LL MK+ + S+ Y+ +I + +D
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 516 WETAEKLQAEMKENGL 531
WE L AEM+ G+
Sbjct: 228 WEGLLGLFAEMRHEGI 243
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 315 VEKGKYPPMSSVNFLVGKLAY--ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRV 372
VEKGKY V L+ KL+ G++ L++ K+ K ++ + V +
Sbjct: 67 VEKGKYS--YDVESLINKLSSLPPRGSIARCLDIFKN------KLSLNDFALVFKEFAGR 118
Query: 373 KDVGAAKQLILDMIAN-GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
D + +L M P ++ +I+ + G + + +E+ + S+G+ V++
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD--EALKLLTE 489
Y +++ Y G E + ++L+ KN + ++ ++ V C D L L E
Sbjct: 179 YTALINAYGRNGRYETSLELLDRM-KNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
M+ G++ + Y+ L+ + ++ + E AE + M + G+
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDE-AEMVFRTMNDGGI 278
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 16/268 (5%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVG-----DILGWLCKGKKVKE 306
N +TYH + L R FD S+ M D ++ K G D+L + +
Sbjct: 82 NYDTYHSILFKLSRARAFDPVESL---MADLRNSYPPIKCGENLFIDLLRNYGLAGRYES 138
Query: 307 AHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL--- 363
+ ++ + + G + S+N L+ L +N L M K+ I P +
Sbjct: 139 SMRIFLRIPDFGVKRSVRSLNTLLNVLI-QNQRFDLVHAMFKN---SKESFGITPNIFTC 194
Query: 364 -AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
+V+ALC+ D+ +A +++ ++ + G P + ++ GY G+M A +++ +
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
RG PD TY V++ GY G A ++++ +KN + V Y ++R CK ++ E
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLC 510
A + EM + K+I +LC
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALC 342
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 245 EFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKV 304
E F PN T + ++AL + + +SA V ++ +P+ ILG +
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 305 KEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA-LEMLKDIPGDMRKHAIKP-- 361
+ A V + ++++G YP ++ L+ +G L + DM K+ I+P
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLM------DGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 362 --YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
Y ++RALC+ K G A+ + +M+ P +++ VI + ++ +A + +
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 356
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+ PD + ++ G + ARK+ +E +K S+ S + Y++L+ G C+ +
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKG-SIPSLLTYNTLIAGMCEKGE 415
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
EA +L +M + + + Y+ LI+ L K + + ++ EM E G + T
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLS-KNGNVKEGVRVLEEMLEIGCFPNKTT 472
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 8/241 (3%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+A TY + + F A++V M + P+E G ++ LCK KK EA +
Sbjct: 259 PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 318
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGT---VPLALEMLKDIPGDMRKHAIKPYLAVVR 367
+ ++E+ P S ++ L ++ L +MLK+ M +A+ L +
Sbjct: 319 FDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN--NCMPDNALLSTL--IH 374
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
LC+ V A++L D G P +N +I G + GE+ +A + + R KP
Sbjct: 375 WLCKEGRVTEARKL-FDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
+ +TY V++ G S G ++ ++LEE + + + L G K+ + ++A+K++
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Query: 488 T 488
+
Sbjct: 494 S 494
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 12/239 (5%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
+ +LG A + D E + PN TY I+AL + A ++ +ML+ +PD
Sbjct: 271 YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPD 330
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
++ LC+ KV EA +++ +++ P + ++ L+ L E G V A ++
Sbjct: 331 SSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKE-GRVTEARKLF 389
Query: 348 KD-----IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
+ IP ++ Y ++ +C ++ A +L DM P +N +I
Sbjct: 390 DEFEKGSIP------SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIE 443
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G SK G + + V +++ + G P+ T+ ++ G G+ E A KI+ A N V
Sbjct: 444 GLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV 502
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 115/278 (41%), Gaps = 10/278 (3%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ + + ++A ++ D+ VPN TY + +SA V ++MLD
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD ++ CK + EA V + + P + ++ L E +
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
+++ +M + + P V+ ALC V A L M+ N P NA+
Sbjct: 315 A-----RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+ +I K G + +A ++ E +G P + TY +++G GE+ A ++ ++ +
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
+ Y+ L+ G K E +++L EM + G
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 2/218 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEK-GKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPG 352
+L L + ++ HA++K E G P + + N LV L +N + A ++L +IP
Sbjct: 161 LLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKND-IESAYKVLDEIPS 219
Query: 353 DMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
+ Y ++ D+ +AK+++ +M+ G P + ++ GY K+G +
Sbjct: 220 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVR 472
A +M +E ++P+ TY V++ + AR + +E + + + ++
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 473 GYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
C+ + DEA L +M + LI LC
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 170/408 (41%), Gaps = 13/408 (3%)
Query: 124 DGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWVWKENSSNVTTPVVESL 183
D ++E+ LD M L L D ++ L R + H + RFF W + + S+
Sbjct: 145 DRNMEAVLDEMKLDLSHDLIVEVLER--FRHAR-KPAFRFFCWAAERQGFAHDSRTYNSM 201
Query: 184 VHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDK 243
+ + + ++F ++ + TI K F+ K A+ +F+
Sbjct: 202 MSIL----AKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA---FAAAKERKKAVGIFEL 254
Query: 244 FEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKK 303
+ ++ ET + + +L R L A + K L + P+ +L C+ +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRN 313
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL 363
+ EA ++ ++++G P + + N ++ L A+++ + ++ Y
Sbjct: 314 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD-AIKLFHVMKSKGPCPNVRSYT 372
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
++R C+ + A + DM+ +G P AV+ +ITG+ ++ E++K ++ +
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
G PD TY ++ +N E A +I + +N S ++ +++ Y ++
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMG 492
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+ EM G+ + Y LI+ L + E L+ EM + G+
Sbjct: 493 RAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLE-EMLDKGM 539
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 96/224 (42%), Gaps = 9/224 (4%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A++LF + PN +Y I+ + S ++A M+D+ PD ++
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
KK+ + + K + EKG P + N L+ +A N +P E I M +
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA--NQKMP---EHATRIYNKMIQ 466
Query: 357 HAIKPYL----AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
+ I+P + ++++ ++ + + +MI G P + + +I G G+ +
Sbjct: 467 NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
A ++ + +G+K + Y + + GG+ E ++ + AK
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+A TY+ I + FD A + +M+ + P G ++ LCK +VKEA +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+++ P + + K + G + A ++ + K Y ++ +L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ ++ +M G P +N +I G+ + A ++ + +GLKPDV
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
+Y +I+ + + E A + E+ + + Y + G C+ QF+EA +L EM
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 491 KDSGVRISVDEYDKLIQSLC 510
G + D + +Q LC
Sbjct: 390 LFKGYKPRRDRLEGFLQKLC 409
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 378 AKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM-KLLESRGLKPDVYTYAVIV 436
A +L +M+ P F +I G K + +A++M +L+ G++P V+ YA ++
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 437 SGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
GE+ A K+ +EA + + +Y +L+ K + +E +L EM + G +
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 497 ISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALIRAV 544
Y+ LI C++ D E+A ++ EM E GL ++ +I V
Sbjct: 291 PDTVTYNVLINGFCVEN-DSESANRVLDEMVEKGLKPDVISYNMILGV 337
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 31/322 (9%)
Query: 257 HFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGD------ILGWLCKGKKVKEAHAV 310
H I+ R +S SV+ K+LD IP +E + D IL + K ++A +
Sbjct: 175 HQVIEIFVRILGRESQYSVAAKLLD--KIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDL 232
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIK----PYLAVV 366
++ + E G P + + N ++ G + + + + +MR +K V+
Sbjct: 233 FERMKEMGPSPTLVTYNVILDVF----GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 367 RALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
A R + AK+ ++ + G PG +N ++ + K G +A+ ++K +E
Sbjct: 289 SACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
D TY +V+ Y G + A ++E K + + + Y +++ Y K + DEALKL
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG-----------LYL-- 533
MK++G + Y+ ++ L K+ E K+ +MK NG L L
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI-KMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 534 -KGVTRALIRAVKEMENEAVEP 554
KG+ + + R +EM++ EP
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEP 489
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 134/306 (43%), Gaps = 13/306 (4%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ +T++ I A R AS + +M A +L L + + V
Sbjct: 489 PDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENV 548
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+ KG P +S + ++ Y G L +E +++ +++ I P ++R L
Sbjct: 549 ISDMKSKGFKPTETSYSLMLQ--CYAKGGNYLGIERIEN---RIKEGQIFPSWMLLRTLL 603
Query: 371 ----RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
+ + + +++ +G P +FN +++ +++ QA +++ + GL
Sbjct: 604 LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLS 663
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
PD+ TY ++ Y GE A +IL+ +K+ V Y+++++G+C+ EA+++
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 487 LTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQA----EMKENGLYLKGVTRALIR 542
L+EM + G+R + Y+ + M E + ++ + + N L K V R
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Query: 543 AVKEME 548
A K E
Sbjct: 784 AGKYSE 789
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 117/273 (42%), Gaps = 1/273 (0%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
T N L+ ++ G+ ++ + + P +Y +Q + + + +
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
+ + Q P + +L K + + + + + G P M N ++ + N
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS-IFTRNN 645
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
A +L+ I D + Y +++ R + A++++ + + P +N
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
VI G+ + G M +AV M+ + RG++P ++TY VSGY+ G ++E KN
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
+ + + +V GYC+ ++ EA+ ++++K
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 124/303 (40%), Gaps = 12/303 (3%)
Query: 235 KAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI 294
+ A E F + + P TY+ +Q + ++ A SV ++M + D ++
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV---GKLAYENGTVPLALEMLKD-- 349
+ + KEA V + + +KG P + ++ GK E+ + L M +
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 350 IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
+P Y AV+ L + +++ DM +NG P A +N ++ G
Sbjct: 418 VPNTC------TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+ + ++S G +PD T+ ++S Y G A K+ E + Y++
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
L+ + + ++++MK G + + Y ++Q K ++ E+++ +KE
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA-KGGNYLGIERIENRIKEG 590
Query: 530 GLY 532
++
Sbjct: 591 QIF 593
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 46/315 (14%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
AL+L D+ P+ TY+ + L R+ + + ++M P+ I+
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIE 501
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVG-------KLAYENGT---VPLA--- 343
LC +KVKEA + ++ +K P + +F+ G K AY+ PL
Sbjct: 502 GLCFARKVKEAEDFFSSLEQK---CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSV 558
Query: 344 -------------LEMLKDIPGDMRKHAIKPYLAV----VRALCRVKDVGAAKQLILDMI 386
LE D+ M + ++P ++ + A C++ +V A+ L M+
Sbjct: 559 YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 387 ANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGY------- 439
G P + +I Y ++ E+ +A + + ++ RG+KPDV TY V++ Y
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEH 678
Query: 440 ----SNGGEM--EAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS 493
S GE+ A ++L E L V Y L+ CKM ++A +L M DS
Sbjct: 679 HETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS 738
Query: 494 GVRISVDEYDKLIQS 508
G+ + Y LI S
Sbjct: 739 GLEPDMVAYTTLISS 753
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 108/254 (42%), Gaps = 27/254 (10%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQ-ALYRHSLFDSASSVSQKMLDAQSIP 286
+ + G K A + F + E+ P ++ + + +L + A V +KM + P
Sbjct: 534 YCEAGLSKKAYKAFVRLEY----PLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEP 589
Query: 287 DEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM 346
G ++G CK V+EA ++ +VE+G P + + ++ N L+
Sbjct: 590 GRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLN-----ELQK 644
Query: 347 LKDIPGDMRKHAIKPYLAVVRAL--------------CRVK-DVGA--AKQLILDMIANG 389
+ + DM++ IKP + L C V+ +VG A +++ + A G
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAG 704
Query: 390 PPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAAR 449
+ +I K+ + QA E+ + GL+PD+ Y ++S Y G ++ A
Sbjct: 705 IGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAV 764
Query: 450 KILEEAKKNHSVLS 463
++ E K +++ S
Sbjct: 765 TLVTELSKKYNIPS 778
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 121/298 (40%), Gaps = 15/298 (5%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
ALE F +F + Y+ AL + + A + Q+M D +PD ++
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
C KV +A + ++ G P + + N LV LA NG LE+ + + + K
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLA-RNGHEEEVLEIYERMKAEGPK 490
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
++ LC + V A+ + P A F + GY + G +A +
Sbjct: 491 PNAVTNSVIIEGLCFARKVKEAEDF-FSSLEQKCPENKASF---VKGYCEAGLSKKAYKA 546
Query: 417 MKLLESRGLKPDVYT---YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
LE L+ VY +++ + GY +E A +L++ M ++
Sbjct: 547 FVRLEY-PLRKSVYIKLFFSLCIEGY-----LEKAHDVLKKMSAYRVEPGRSMCGKMIGA 600
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+CK+ EA L M + G+ + Y +I + C + + + AE L +MK+ G+
Sbjct: 601 FCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC-RLNELQKAESLFEDMKQRGI 657
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 11/288 (3%)
Query: 233 NGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDE---E 289
+ + A+ LFD VP Y I L R +SA + ++ ++ + +
Sbjct: 198 DSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNID 257
Query: 290 KVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD 349
+G ++ LC +KV+EA + + +V G ++S + + Y E L
Sbjct: 258 SIGKVIELLCLDQKVQEARVLARKLVALG--CILNSSIYSKITIGYNEKQ---DFEDLLS 312
Query: 350 IPGDMRKHAIKPYLA--VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
G++ K+ ++ ++ +LCR A + ++ G F +I
Sbjct: 313 FIGEV-KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYE 371
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G++ +AV + + S+G KPDVY+Y I+SG G + IL+E K+N +LS +
Sbjct: 372 GDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTF 431
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
+V GYCK QF+EA +++ +M G+ + D L ++ L D
Sbjct: 432 KIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFD 479
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/291 (17%), Positives = 126/291 (43%), Gaps = 4/291 (1%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I N LIFY + N ++ + + +P+ T++F + + + S+ M
Sbjct: 911 IYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAM 970
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+ P+ + + LC VK+A +++ + KG S V + + G
Sbjct: 971 ISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGE 1030
Query: 340 VPLALEMLKDIPGDMRKHAIKP-YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
+P A + L + R + P Y +++ L ++ A L+ M+ N PG++ ++
Sbjct: 1031 IPKAEDFLTRVT---RNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYD 1087
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
VI G + ++ +A++ + GL P + T++ +V + ++ + ++++
Sbjct: 1088 SVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGL 1147
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
S M+ +++ + + +A +++ M+ G + + + LI ++
Sbjct: 1148 GESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNM 1198
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
Query: 271 SASSVSQKMLDAQSIPDEEKVGDIL-GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFL 329
SA S+ + +L +S P + ++L ++ + K E + V + +G P ++ NFL
Sbjct: 891 SAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFL 950
Query: 330 VGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANG 389
V + +L L + K + AV +LC DV A L M + G
Sbjct: 951 VHGYSSSA-DYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKG 1009
Query: 390 PPPGNAVFN--FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEA 447
G++V V T SK GE+ +A + + + G+ Y I+ S+ G ++
Sbjct: 1010 WNLGSSVVQTKIVETLISK-GEIPKAEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDI 1066
Query: 448 ARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQ 507
A +L KN S+ Y S++ G + Q D+A+ TEM + G+ S+ + L+
Sbjct: 1067 AVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVH 1126
Query: 508 SLC 510
C
Sbjct: 1127 KFC 1129
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 14/330 (4%)
Query: 222 NKLIFYFSQLG-NGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N L+ + +LG +G+A L + VP +TY+ + AL + D+A + K L
Sbjct: 122 NTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF-KHL 180
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
++ P+ ++ LCK ++V + + + + G Y P + + K+ ++ +
Sbjct: 181 KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG-YTPNAVTYTTMLKMYFKTKRI 239
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV-FNF 399
L++ + + AVV AL + A + + +++ +G + V +N
Sbjct: 240 EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNT 299
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ Y K G + ++++ +E +GLKPD YT+ +IV+G N G A K L +
Sbjct: 300 LLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMG 359
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDE--YDKLIQSLCLKAMDWE 517
S V + L+ G CK D A++L M+ VR DE Y ++ +LC K
Sbjct: 360 MQPSVVTCNCLIDGLCKAGHVDRAMRLFASME---VR---DEFTYTSVVHNLC-KDGRLV 412
Query: 518 TAEKLQAEMKENGLYL-KGVTRALIRAVKE 546
A KL G+ + RA++ ++E
Sbjct: 413 CASKLLLSCYNKGMKIPSSARRAVLSGIRE 442
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 83/148 (56%), Gaps = 5/148 (3%)
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
V +LC+ +++ A+ L++D I G P +N +I GY++ + +A + + + G+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM--YHSLVRGYCKMEQFDEA 483
+PDV TY ++SG + + ++ +E HS LSP M Y++L+ Y K+ + EA
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEML--HSGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 484 LKLLTE-MKDSGVRISVDEYDKLIQSLC 510
K+L E + +G+ +D Y+ L+ +LC
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALC 165
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 104/245 (42%), Gaps = 36/245 (14%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
+P+ TY+ I+ R D A +V+++M +A PD ++ K +
Sbjct: 45 LPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQ 104
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
++ ++ G P M S N L+ ++ G A ++L +
Sbjct: 105 LFDEMLHSGLSPDMWSYNTLM-SCYFKLGRHGEAFKILHE-------------------- 143
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
D+ G PG +N ++ K G A+E+ K L+SR +KP++
Sbjct: 144 --------------DIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPEL 188
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
TY ++++G + + ++ E KK+ + V Y ++++ Y K ++ ++ L+L +
Sbjct: 189 MTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLK 248
Query: 490 MKDSG 494
MK G
Sbjct: 249 MKKEG 253
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 11/181 (6%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y +++ R + A + M G P +N +I+G +K + + +++ +
Sbjct: 51 YNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML 110
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV-MYHSLVRGYCKMEQF 480
GL PD+++Y ++S Y G A KIL E ++ + Y+ L+ CK
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHT 170
Query: 481 DEALKLLTEMKDSGVRISVDEYDKLIQSLC----LKAMDWETAEKLQAEMKENGLYLKGV 536
D A++L +K S V+ + Y+ LI LC + ++DW + E+K++G V
Sbjct: 171 DNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDW-----MMRELKKSGYTPNAV 224
Query: 537 T 537
T
Sbjct: 225 T 225
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 392 PGNAVFNFVITGYSK---VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
P + ++ ++ GY K V + + +E M+ + R PD TY +VS + N G M+ A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM-KDSGVRISVDEYDKLIQ 507
R++L E + + + Y+ L++GYCK Q D A LL EM +D+G+ V Y+ +I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 508 SLCLKAMDWETAEKLQAEMKENGL 531
C+ D A EM+ G+
Sbjct: 532 G-CILIDDSAGALAFFNEMRTRGI 554
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 320 YPPMSSVNFLVGKLAYENGTVPLALEMLKDI--PGDMRKHAIK-PYLAVVRALCRVKDVG 376
+ P S + + K +NG V ML+ + D H + Y VV A +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 377 AAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMK-LLESRGLKPDVYTYAVI 435
A+Q++ +M G P +N ++ GY K ++ +A ++++ + E G++PDV +Y +I
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE-MKDSG 494
+ G + A E + + + Y +L++ + Q A ++ E M D
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 495 VRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
V++ + ++ L++ C + E A+++ + MKENG Y
Sbjct: 590 VKVDLIAWNMLVEGYCRLGL-IEDAQRVVSRMKENGFY 626
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIAN-GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLL 420
Y +++ C+ + A+ L+ +M + G P +N +I G + + A+ +
Sbjct: 490 YNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEM 549
Query: 421 ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV-LSPVMYHSLVRGYCKMEQ 479
+RG+ P +Y ++ ++ G+ + A ++ +E + V + + ++ LV GYC++
Sbjct: 550 RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL 609
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKL 505
++A ++++ MK++G +V Y L
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSL 635
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 6/275 (2%)
Query: 225 IFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQS 284
I ++Q +L +F E F+ ++ + + A + A V +M
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 285 I-PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT--VP 341
I PD E ++ C+ ++++ + KG P SS ++ E+ + V
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
L M+KD ++ + Y +++LC+ K AK L+ M++ G P ++ +I
Sbjct: 243 KVLAMMKDRGVNI---GVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G+ + +A ++ K++ +RG KPD Y ++ GG+ E A + +E+ + + V
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
S + SLV G K + +EA +L+ ++K+ R
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTR 394
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 8/190 (4%)
Query: 359 IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGY---SKVGEMGQAVE 415
++ Y +++ C ++ ++ +M G P ++ F +I+G+ K E+G+ +
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLA 246
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
MMK RG+ V TY + + + + A+ +L+ + V Y L+ G+C
Sbjct: 247 MMK---DRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC 303
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAE-MKENGLYLK 534
+ F+EA KL M + G + + Y LI LC K D+ETA L E M++N +
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLC-KGGDFETALSLCKESMEKNWVPSF 362
Query: 535 GVTRALIRAV 544
+ ++L+ +
Sbjct: 363 SIMKSLVNGL 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 343 ALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN-GPPPGNAVFNFVI 401
+L + +D+ +K A++ A KD AK++ ++M G P +N +I
Sbjct: 135 SLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
+ + G + ++ +E +G+KP+ ++ +++SG+ + + K+L K
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVN 254
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEK 521
+ Y+ ++ CK ++ EA LL M +G++ + Y LI C D+E A+K
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFC-NEDDFEEAKK 313
Query: 522 LQAEMKENG 530
L M G
Sbjct: 314 LFKIMVNRG 322
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
T PL L L + R+ + Y ++ + KD+ +++L +M+ G P NA F
Sbjct: 157 TAPLVLNNLLETMKPSREVIL--YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFT 214
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I+ + G +AVE + + S G +PD T A ++ Y G ++ A + + A+
Sbjct: 215 TIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTE 274
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
+ V + +L+R Y +D L + EMK GV+ ++ Y++LI S+ W+
Sbjct: 275 KWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQ- 333
Query: 519 AEKLQAEMKENGLYLKGVT-RALIRA 543
A+ + ++ NG T AL+RA
Sbjct: 334 AKIIYKDLITNGFTPNWSTYAALVRA 359
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 128/314 (40%), Gaps = 46/314 (14%)
Query: 254 ETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKA 313
ET+ I+ R L A +M D +PD+ ++ L + ++ EA + + +
Sbjct: 187 ETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS 246
Query: 314 VVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRAL 369
+ ++ + + N + G G + A ++ K+ M+ I+P Y V+ AL
Sbjct: 247 LKDRFEPDVIVYTNLVRGWC--RAGEISEAEKVFKE----MKLAGIEPNVYTYSIVIDAL 300
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
CR + A + DM+ +G P FN ++ + K G + +++ ++ G +PD
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 430 YTYAVIVSGYSNGGEMEAARKILE---------------------EAKKN----HSVLSP 464
TY ++ + +E A K+L E K++ H + S
Sbjct: 361 ITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSK 420
Query: 465 VM----------YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAM 514
+M Y+ L+R + + D LK+ EM D V +V+ Y L+ C
Sbjct: 421 MMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMG- 479
Query: 515 DWETAEKLQAEMKE 528
W A KL EM E
Sbjct: 480 HWNNAYKLFKEMVE 493
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ L+ + + G A ++F + + PN TY I AL R A V M
Sbjct: 257 VYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 316
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
LD+ P+ +++ K + ++ VY + + G P + NFL+ + +
Sbjct: 317 LDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI-EAHCRDEN 375
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ A+++L + + + + R + + +DV A ++ M+ P +N
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
++ + ++M K ++ + ++P+V TY ++V+ + G A K+ +E
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKE 490
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 138/347 (39%), Gaps = 45/347 (12%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYR-------HSLFDS----- 271
LI + + G A+ F++ E + CVP+ + I L R S FDS
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF 251
Query: 272 ----------------------ASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
A V ++M A P+ ++ LC+ ++ AH
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAV 365
V+ +++ G P + N L+ ++ + G L+ + M+K +P Y +
Sbjct: 312 VFADMLDSGCAPNAITFNNLM-RVHVKAGRTEKVLQ----VYNQMKKLGCEPDTITYNFL 366
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ A CR +++ A +++ MI + FN + K ++ A M +
Sbjct: 367 IEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
+P+ TY +++ + + K+ +E + Y LV +C M ++ A K
Sbjct: 427 EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYK 486
Query: 486 LLTEM-KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
L EM ++ + S+ Y+ ++ L +A + E+L +M + GL
Sbjct: 487 LFKEMVEEKCLTPSLSLYEMVLAQL-RRAGQLKKHEELVEKMIQKGL 532
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 169/408 (41%), Gaps = 13/408 (3%)
Query: 124 DGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWVWKENSSNVTTPVVESL 183
D ++E+ LD M L L D ++ L R + H + RFF W + + S+
Sbjct: 145 DRNMEAVLDEMKLDLSHDLIVEVLER--FRHAR-KPAFRFFCWAAERQGFAHASRTYNSM 201
Query: 184 VHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDK 243
+ + + ++F ++ + TI K F+ K A+ +F+
Sbjct: 202 MSIL----AKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA---FAAAKERKKAVGIFEL 254
Query: 244 FEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKK 303
+ ++ ET + + +L R L A + K L + P+ +L C+ +
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRN 313
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL 363
+ EA ++ +++ G P + + N ++ L + A+++ + ++ Y
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGL-LRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
++R C+ + A + DM+ +G P AV+ +ITG+ ++ E++K ++ +
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
G PD TY ++ +N E +I + +N S ++ +++ Y ++
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+ EM G+ + Y LI+ L + E L+ EM + G+
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE-EMLDKGM 539
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 96/224 (42%), Gaps = 9/224 (4%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A++LF + PN +Y I+ + S ++A M+D+ PD ++
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
KK+ + + K + EKG P + N L+ +A N +P E I M +
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA--NQKMP---EHGTRIYNKMIQ 466
Query: 357 HAIKPYL----AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
+ I+P + ++++ ++ + + +MI G P + + +I G G+ +
Sbjct: 467 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
A ++ + +G+K + Y + + GG+ E ++ + AK
Sbjct: 527 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 24/277 (8%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
L+ F + G A EL + E N +TY I + S D A + +KM
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMG 313
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
D ++G LCK K ++ A ++Y + G P + L+ + E+ +
Sbjct: 314 MNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRIT 373
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
++ DI +K + Y ++ R V A I +++ N G +
Sbjct: 374 EVIIGDID---KKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVS-------- 422
Query: 404 YSKVGEMGQAVEMMKLLE--SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
E++KLL+ ++ + PD + +++++ +++ A +L + +N +
Sbjct: 423 -----------EIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLI 471
Query: 462 LSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRIS 498
P+MY++++ G CK + +E+LKLL EMKD+GV S
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 106/278 (38%), Gaps = 36/278 (12%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
+P Y+ I+ + + + + + +M DA P + + I G L + A
Sbjct: 471 IPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALD 530
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGT------------------------------ 339
+ K + G P + FLV KL ENG
Sbjct: 531 LLKKMRFYGFEPWIKHTTFLVKKLC-ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGL 589
Query: 340 -----VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
V LE+ +DI + + Y +++ALC+ A L +M++ G P
Sbjct: 590 IKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTV 649
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
A +N +I G+ K GE+ + + + + PDV TY ++ G G A E
Sbjct: 650 ATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNE 709
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKD 492
K + + + +L++G CK EAL EM++
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEE 747
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 304 VKEAHAVYKAVVEKGKYPPMS-SVNFLVGKLAYENGT----VPLALEMLKDIPGDMRKHA 358
V EA +V+ V E G P + + N L+ ++ N + V L+ ++D K
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 359 IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMK 418
+ P L V C A + ++++ G + + ++ + K G++ +A E+++
Sbjct: 217 LTPVLQVY---CNTGKSERALSVFNEILSRGWLDEH-ISTILVVSFCKWGQVDKAFELIE 272
Query: 419 LLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
+LE R ++ + TY V++ G+ ++ A ++ E+ ++ +Y L+ G CK +
Sbjct: 273 MLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHK 332
Query: 479 QFDEALKLLTEMKDSGV 495
+ AL L E+K SG+
Sbjct: 333 DLEMALSLYLEIKRSGI 349
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
V+ Y G+ +A+ + + SRG D + ++V + G+++ A +++E ++
Sbjct: 220 VLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERD 278
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
L+ Y L+ G+ K + D+A +L +M+ G+ + YD LI LC K D E A
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC-KHKDLEMA 337
Query: 520 EKLQAEMKENGL 531
L E+K +G+
Sbjct: 338 LSLYLEIKRSGI 349
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+N VI ++ G++ A ++K ++ GL PDV TY +++GY N G+++ A ++ +E
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM--KDSGVRISVD--EYDKLIQSLCLK 512
K+ VL+ V Y ++ G CK + AL+LL EM +D G IS + Y +IQ+ C K
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y V+R D+ A LI +M G P + +I GY G++ A + K +
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH--SVLSP--VMYHSLVRGYCKM 477
+ TY+ I+ G G+ME A ++L E +K ++SP V Y +++ +C+
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Query: 478 EQFDEALKLLTEMKDSGV 495
+ +EAL +L M + G
Sbjct: 288 RRVEEALLVLDRMGNRGC 305
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 347 LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
LK PG KH Y +V L R K GA +L+ +M+ +G P +N +I Y +
Sbjct: 354 LKRQPG--FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM 466
+ +A+ + ++ G KPD TY ++ ++ G ++ A + + +
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 467 YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
Y ++ K A KL EM D G ++ Y+ ++ L KA +++ A KL +M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDM 530
Query: 527 KENGLYLKGVTRALIRAV 544
+ G VT +++ V
Sbjct: 531 QNAGFEPDKVTYSIVMEV 548
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 113/258 (43%), Gaps = 1/258 (0%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+ TY + L R F + + + +M+ P+ ++ + + EA V+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ E G P + L+ + + G + +A++M + + Y ++ L +
Sbjct: 423 NQMQEAGCKPDRVTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
+ AA +L +M+ G P +N ++ ++K A+++ + +++ G +PD T
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y++++ + G +E A + E ++ + + +Y LV + K ++A + M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 492 DSGVRISVDEYDKLIQSL 509
+G+R +V + L+ +
Sbjct: 602 HAGLRPNVPTCNSLLSTF 619
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 159/407 (39%), Gaps = 61/407 (14%)
Query: 111 LENVVSLLQREDADGSLESSLDAMDLTLHQDFVIIALRR-NSWGHGLVENLLRFFRWVWK 169
+ENV S+L+R + E +L + L + L++ N +G N L FF W+ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYG-----NALGFFYWLKR 356
Query: 170 E----NSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLI 225
+ + + T +V +L R K+F ++ +L N+LI
Sbjct: 357 QPGFKHDGHTYTTMVGNLG--------RAKQFGAINKLLDEMVRDGCQPNT--VTYNRLI 406
Query: 226 FYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSI 285
+ + A+ +F++ + C P+ TY I + D A + Q+M
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
PD I+ L K + AH ++ +V++G P + + N +
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM---------------- 510
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
M HA + ++ A +L DM G P ++ V+
Sbjct: 511 --------MDLHA------------KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
G + +A + ++ + PD Y ++V + G +E A + + H+ L P
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HAGLRPN 608
Query: 466 M--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ +SL+ + ++ + EA +LL M G+R S+ Y L+ S C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 347 LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
LK PG KH Y +V L R K GA +L+ +M+ +G P +N +I Y +
Sbjct: 354 LKRQPG--FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM 466
+ +A+ + ++ G KPD TY ++ ++ G ++ A + + +
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 467 YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
Y ++ K A KL EM D G ++ Y+ ++ L KA +++ A KL +M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDM 530
Query: 527 KENGLYLKGVTRALIRAV 544
+ G VT +++ V
Sbjct: 531 QNAGFEPDKVTYSIVMEV 548
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 113/258 (43%), Gaps = 1/258 (0%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+ TY + L R F + + + +M+ P+ ++ + + EA V+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ E G P + L+ + + G + +A++M + + Y ++ L +
Sbjct: 423 NQMQEAGCKPDRVTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
+ AA +L +M+ G P +N ++ ++K A+++ + +++ G +PD T
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y++++ + G +E A + E ++ + + +Y LV + K ++A + M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 492 DSGVRISVDEYDKLIQSL 509
+G+R +V + L+ +
Sbjct: 602 HAGLRPNVPTCNSLLSTF 619
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 159/407 (39%), Gaps = 61/407 (14%)
Query: 111 LENVVSLLQREDADGSLESSLDAMDLTLHQDFVIIALRR-NSWGHGLVENLLRFFRWVWK 169
+ENV S+L+R + E +L + L + L++ N +G N L FF W+ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYG-----NALGFFYWLKR 356
Query: 170 E----NSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLI 225
+ + + T +V +L R K+F ++ +L N+LI
Sbjct: 357 QPGFKHDGHTYTTMVGNLG--------RAKQFGAINKLLDEMVRDGCQPNT--VTYNRLI 406
Query: 226 FYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSI 285
+ + A+ +F++ + C P+ TY I + D A + Q+M
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
PD I+ L K + AH ++ +V++G P + + N +
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM---------------- 510
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
M HA + ++ A +L DM G P ++ V+
Sbjct: 511 --------MDLHA------------KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
G + +A + ++ + PD Y ++V + G +E A + + H+ L P
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HAGLRPN 608
Query: 466 M--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ +SL+ + ++ + EA +LL M G+R S+ Y L+ S C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 347 LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
LK PG KH Y +V L R K GA +L+ +M+ +G P +N +I Y +
Sbjct: 354 LKRQPG--FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM 466
+ +A+ + ++ G KPD TY ++ ++ G ++ A + + +
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 467 YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEM 526
Y ++ K A KL EM D G ++ Y+ ++ L KA +++ A KL +M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN-IMMDLHAKARNYQNALKLYRDM 530
Query: 527 KENGLYLKGVTRALIRAV 544
+ G VT +++ V
Sbjct: 531 QNAGFEPDKVTYSIVMEV 548
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 113/258 (43%), Gaps = 1/258 (0%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+ TY + L R F + + + +M+ P+ ++ + + EA V+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ E G P + L+ + + G + +A++M + + Y ++ L +
Sbjct: 423 NQMQEAGCKPDRVTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK 481
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
+ AA +L +M+ G P +N ++ ++K A+++ + +++ G +PD T
Sbjct: 482 AGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
Y++++ + G +E A + E ++ + + +Y LV + K ++A + M
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML 601
Query: 492 DSGVRISVDEYDKLIQSL 509
+G+R +V + L+ +
Sbjct: 602 HAGLRPNVPTCNSLLSTF 619
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 159/407 (39%), Gaps = 61/407 (14%)
Query: 111 LENVVSLLQREDADGSLESSLDAMDLTLHQDFVIIALRR-NSWGHGLVENLLRFFRWVWK 169
+ENV S+L+R + E +L + L + L++ N +G N L FF W+ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYG-----NALGFFYWLKR 356
Query: 170 E----NSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLI 225
+ + + T +V +L R K+F ++ +L N+LI
Sbjct: 357 QPGFKHDGHTYTTMVGNLG--------RAKQFGAINKLLDEMVRDGCQPNT--VTYNRLI 406
Query: 226 FYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSI 285
+ + A+ +F++ + C P+ TY I + D A + Q+M
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
PD I+ L K + AH ++ +V++G P + + N +
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM---------------- 510
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
M HA + ++ A +L DM G P ++ V+
Sbjct: 511 --------MDLHA------------KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
G + +A + ++ + PD Y ++V + G +E A + + H+ L P
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HAGLRPN 608
Query: 466 M--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ +SL+ + ++ + EA +LL M G+R S+ Y L+ S C
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/408 (19%), Positives = 169/408 (41%), Gaps = 13/408 (3%)
Query: 124 DGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWVWKENSSNVTTPVVESL 183
D ++E+ LD M L L D ++ L R + H + RFF W + + S+
Sbjct: 144 DRNMEAVLDEMKLDLSHDLIVEVLER--FRHAR-KPAFRFFCWAAERQGFAHDSRTYNSM 200
Query: 184 VHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDK 243
+ + + ++F ++ + TI K F+ K A+ +F+
Sbjct: 201 MSIL----AKTRQFETMVSVLEEMGTKGLLTMETFTIAMKA---FAAAKERKKAVGIFEL 253
Query: 244 FEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKK 303
+ ++ ET + + +L R L A + K L + P+ +L C+ +
Sbjct: 254 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRN 312
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL 363
+ EA ++ +++ G P + + N ++ L + A+++ + ++ Y
Sbjct: 313 LIEAARIWNDMIDHGLKPDIVAHNVMLEGL-LRSMKKSDAIKLFHVMKSKGPCPNVRSYT 371
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
++R C+ + A + DM+ +G P AV+ +ITG+ ++ E++K ++ +
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 431
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
G PD TY ++ +N E +I + +N S ++ +++ Y ++
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 491
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+ EM G+ + Y LI+ L + E L+ EM + G+
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE-EMLDKGM 538
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 96/224 (42%), Gaps = 9/224 (4%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A++LF + PN +Y I+ + S ++A M+D+ PD ++
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
KK+ + + K + EKG P + N L+ +A N +P E I M +
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA--NQKMP---EHGTRIYNKMIQ 465
Query: 357 HAIKPYL----AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQ 412
+ I+P + ++++ ++ + + +MI G P + + +I G G+ +
Sbjct: 466 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
A ++ + +G+K + Y + + GG+ E ++ + AK
Sbjct: 526 ACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 569
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI-LGWLCKGKKVK-EAH 308
PN T++ +QA + + A V +KM + PD I ++ KG+ V+ E+
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 309 AVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHA-IKPYLAVVR 367
V K V+++ P + +VG E G V L ++ + +MR A + + +++
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCRE-GRVRDGLRFVRRMK-EMRVEANLVVFNSLIN 303
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
V D +++ M ++ V+ +S G M +A ++ K + G+KP
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILE----EAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
D + Y+++ GY E + A ++LE E++ N V++ +++ G+C D+A
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVESRPN-----VVIFTTVISGWCSNGSMDDA 418
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ 523
+++ +M GV ++ ++ L+ W+ E LQ
Sbjct: 419 MRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQ 458
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 21/237 (8%)
Query: 336 ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
E G A + K + + ++ Y ++ A+ K G+ ++ ++ +G +
Sbjct: 57 ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSI 116
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
FN VI +S+ G M AV+ + ++ GL P TY ++ GY G+ E + ++L+
Sbjct: 117 FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 456 KKNHSV-LSPVM--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
+ +V + P + ++ LV+ +CK ++ +EA +++ +M++ GVR Y+ + K
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 513 A----MDWETAEKLQAEMKEN------GLYLKGVTRA--------LIRAVKEMENEA 551
+ E EK+ + K G+ + G R +R +KEM EA
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 23/307 (7%)
Query: 269 FDSASSVSQKMLDAQSIPDEEK------VGDILGWLCKGKKVKEAHAVYKAVVEKGKYPP 322
F A +VS+ + QSIPDE IL L K K+ ++ + G P
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 323 MSSVN-FLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGA-AKQ 380
+ + N L G + +NG P A+E++ ++P + + Y V A+C A+
Sbjct: 201 VVTYNTLLAGCIKVKNG-YPKAIELIGELPHNGIQMDSVMY-GTVLAICASNGRSEEAEN 258
Query: 381 LILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYS 440
I M G P ++ ++ YS G+ +A E+M ++S GL P+ ++ Y
Sbjct: 259 FIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYI 318
Query: 441 NGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVD 500
GG + +R++L E + + + Y L+ G K + +EA + +MK GVR
Sbjct: 319 KGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGY 378
Query: 501 EYDKLIQSLCLK---------AMDWETA-EKLQAEMKENGL--YLK-GVTRALIRAVKEM 547
+I +LC + D ET EK M L Y + G +++R +K+M
Sbjct: 379 ANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKM 438
Query: 548 ENEAVEP 554
+ +AV P
Sbjct: 439 DEQAVSP 445
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 125/289 (43%), Gaps = 4/289 (1%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N+++ S+ N A ++FDK + + P+ ++Y ++ + V+++M
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
D PD G I+ CK KK +EA + + ++ P L+ L E +
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK-KL 318
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
ALE + Y A+V A C + + A + + +M G P ++ +
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ + M ++ E ++ ++ +P V TY ++V + N ++ A KI +E K
Sbjct: 379 L---HHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ M+ SL+ C + DEA + EM D G+R + +L Q+L
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 484
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 99/253 (39%), Gaps = 41/253 (16%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
+L L K + V +A V+ + +K P + S L+ E L L + ++ +
Sbjct: 203 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQE-----LNLLRVDEVNRE 257
Query: 354 MRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
M+ +P Y ++ A C+ K A + +M P +F +I G +
Sbjct: 258 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 317
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE--------------- 454
+ A+E + +S G + TY +V Y ME A K ++E
Sbjct: 318 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 377
Query: 455 ----------AKKNHSVLSPV-------MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
+K+ + V + Y +VR +C E+ D A+K+ EMK GV
Sbjct: 378 ILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLP 437
Query: 498 SVDEYDKLIQSLC 510
+ + LI +LC
Sbjct: 438 GMHMFSSLITALC 450
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 111/254 (43%), Gaps = 2/254 (0%)
Query: 256 YHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVV 315
Y+ I++L + F S+ M A+ + +E I + +KVKEA + +
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDM-KAKKLLSKETFALISRRYARARKVKEAIGAFHKME 189
Query: 316 EKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDV 375
E G S N ++ L+ ++ V A ++ + + IK Y ++ + ++
Sbjct: 190 EFGFKMESSDFNRMLDTLS-KSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 376 GAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVI 435
++ +M G P + +I + K + +A+ +E R KP + + +
Sbjct: 249 LRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSL 308
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
++G + ++ A + E +K + L Y++LV YC ++ ++A K + EM+ GV
Sbjct: 309 INGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGV 368
Query: 496 RISVDEYDKLIQSL 509
+ YD ++ L
Sbjct: 369 GPNARTYDIILHHL 382
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 288 EEKVGD-------ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
E VGD ++G + K +A + A+ ++G P + S N L+ G
Sbjct: 218 EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLT 277
Query: 341 P-LALEMLKDIPGD-MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
P LA+E+L + +R AI Y ++ A R ++ A ++ DM A+ P +N
Sbjct: 278 PNLAVELLDMVRNSGLRPDAIT-YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYN 336
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I+ Y + G +A + LE +G PD TY ++ ++ E +++ ++ +K
Sbjct: 337 AMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKD-SGVRISVDEYDKLIQSLCLKAMDWE 517
+ Y++++ Y K Q D AL+L +MK SG Y LI SL KA
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG-KANRTV 455
Query: 518 TAEKLQAEMKENGL 531
A L +EM + G+
Sbjct: 456 EAAALMSEMLDVGI 469
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 118/272 (43%), Gaps = 2/272 (0%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ S+ N A+++F+ E +C P+ TY+ I R L A + ++
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD +L + + ++ VY+ + + G + N ++ + + G +
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII-HMYGKQGQLD 419
Query: 342 LALEMLKDIPG-DMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
LAL++ KD+ G R Y ++ +L + A L+ +M+ G P ++ +
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I GY+K G+ +A + + G KPD Y+V++ G E A + + +
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKD 492
S +Y ++ G K + D+ K + +M++
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 147/326 (45%), Gaps = 18/326 (5%)
Query: 177 TPVVES---LVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGN 233
+P VES L+HA+C E+ + + EL +IL ++ F++ GN
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKS-----SIL-LMLDAFARAGN 872
Query: 234 GKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGD 293
+++ + +P Y I+ L + A + +M +A +
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP----LALEMLKD 349
+L + K+ VY+ + E G P ++ N L+ + Y P L ++ +++
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI--IMYCRDRRPEEGYLLMQQMRN 990
Query: 350 IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
+ D + + Y +++ A + K + A+QL ++++ G + ++ ++ G
Sbjct: 991 LGLDPK---LDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGS 1047
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+A ++++++++ G++P + T +++ YS+ G + A K+L K L+ + Y S
Sbjct: 1048 DSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGV 495
++ Y + + ++ ++ L EMK G+
Sbjct: 1108 VIDAYLRSKDYNSGIERLLEMKKEGL 1133
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 14/246 (5%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A+EL D P+A TY+ + A R S D A V + M + PD ++
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
+ EA ++ + KG +P + N L+ A E T E +K++ M+K
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNT-----EKVKEVYQQMQK 395
Query: 357 HAI----KPYLAVVRALCRVKDVGAAKQLILDMIA-NGPPPGNAVFNFVITGYSKVGEMG 411
Y ++ + + A QL DM +G P + +I K
Sbjct: 396 MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARK----ILEEAKKNHSVLSPVMY 467
+A +M + G+KP + TY+ ++ GY+ G+ E A +L K ++ VM
Sbjct: 456 EAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Query: 468 HSLVRG 473
L+RG
Sbjct: 516 DVLLRG 521
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 128/288 (44%), Gaps = 14/288 (4%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
P+ +T++ + A + ++ A ++ M+ P E + +L LC +++E +
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHA----IKPYLAV 365
V + + + G SS+ ++ A +K I M+ I+ Y +
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFE-----VKKIYSSMKAAGYLPTIRLYRMM 898
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ LC+ K V A+ ++ +M A++N ++ Y+ + + + V++ + ++ GL
Sbjct: 899 IELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL 958
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM--YHSLVRGYCKMEQFDEA 483
+PD TY ++ Y E ++++ + + L P + Y SL+ + K + ++A
Sbjct: 959 EPDETTYNTLIIMYCRDRRPEEGYLLMQQMR--NLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+L E+ G+++ Y +++ D AEKL MK G+
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSD-SKAEKLLQMMKNAGI 1063
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 363 LAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
++++ AL A+ L ++ +G P +N ++ GY K G + A M+ +E
Sbjct: 308 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
RG+ PD +TY++++ Y N G E+AR +L+E + + ++ L+ G+ ++ +
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSL 509
++L EMK GV+ Y+ +I +
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 120/281 (42%), Gaps = 9/281 (3%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ ++L+ F G + ++ + + P+ + Y+ I + + D A + +M
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
L PD ++ CK + A +++A+ +G P ++ N ++ +
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE-- 528
Query: 340 VPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
+ +K + G M+ I P + +V + A + + +M + G P +
Sbjct: 529 ---RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 585
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
++N +I Y++ G QAV +++ S GLKP + +++ + A +L+
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
K+N V Y +L++ ++++F + + EM SG +
Sbjct: 646 KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 128/333 (38%), Gaps = 15/333 (4%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ + + G K A + + E P+ TY I A ++SA V ++M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
P+ +L + ++ V K + G P N ++ N
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN---- 458
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
L+ M I+P + ++ C+ A+++ M G P +
Sbjct: 459 -CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N +I Y ++ ++S+G+ P+V T+ +V Y G A + LEE K
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
S MY++L+ Y + ++A+ M G++ S+ + LI + D E
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Query: 518 TAEKLQAEMKENGLYLKGVT-----RALIRAVK 545
LQ MKENG+ VT +ALIR K
Sbjct: 638 AFAVLQY-MKENGVKPDVVTYTTLMKALIRVDK 669
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 133/282 (47%), Gaps = 16/282 (5%)
Query: 256 YHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG-WLCKGKKVKEAHAVYKAV 314
Y+ IQ L + + A +K ++ D + +++ +L KG K A +Y+++
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYK-AFEIYESM 304
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKD 374
+ S+ ++ LA ++G + A ++ + M++ ++P +V +L V
Sbjct: 305 EKTDSLLDGSTYELIIPSLA-KSGRLDAAFKLFQQ----MKERKLRPSFSVFSSL--VDS 357
Query: 375 VGAAKQL------ILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
+G A +L ++M G P +F +I Y+K G++ A+ + ++ G +P+
Sbjct: 358 MGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
Y +I+ ++ G++E A + ++ +K + +P Y L+ + Q D A+K+
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYN 477
Query: 489 EMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
M ++G+R + Y L+ L K + + A K+ EMK G
Sbjct: 478 SMTNAGLRPGLSSYISLLTLLANKRL-VDVAGKILLEMKAMG 518
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 136/306 (44%), Gaps = 13/306 (4%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ F G A E+++ E + + TY I +L + D+A + Q+M +
Sbjct: 282 NNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKE 341
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ P ++ + K ++ + VY + G P + L+ A + G +
Sbjct: 342 RKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYA-KAGKLD 400
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
AL + +M+K +P Y ++ + + + A + DM G P + +
Sbjct: 401 TALRLWD----EMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+ ++ ++ G++ A+++ + + GL+P + +Y +++ +N ++ A KIL E K
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Query: 458 -NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
+SV V ++ Y K D ALK L M SG++ + +L +S C+K +
Sbjct: 517 MGYSV--DVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFES-CMKNGLY 573
Query: 517 ETAEKL 522
++A L
Sbjct: 574 DSARPL 579
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 11/254 (4%)
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
PD + ++ LC + EAH + + G P + N ++ +L Y V L
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVS-TLG 146
Query: 346 MLKDIPGDMRKH--AIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
++ + G ++ ++ Y ++ LC + V A +L+ DM G P F +I G
Sbjct: 147 VIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGG 206
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE-----AKKN 458
Y ++ E+ A ++ + G++P+ T +V++ G+ ++E RK+++E +
Sbjct: 207 YCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNET 266
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK-DSGVRISVDEYDKLIQSLCLKAMDWE 517
+ + + +LV C+ F++ ++ M V + Y +I SLC +
Sbjct: 267 DTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF-AYGHMIDSLC-RYRRNH 324
Query: 518 TAEKLQAEMKENGL 531
A ++ MK GL
Sbjct: 325 GAARIVYIMKSKGL 338
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 150/341 (43%), Gaps = 12/341 (3%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
T N +I + G A +L ++ F+ P+ TY +++L + A +V +
Sbjct: 343 TSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLEL 402
Query: 279 MLDAQSIPDEEKVGDI-LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
ML + D ++ +I L LC E V ++++ P ++N ++ L +
Sbjct: 403 MLRKEG-ADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLC-KM 460
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP-----P 392
G V A+++L D+ K + + +C + G A++ LD++ P P
Sbjct: 461 GRVDDAMKVLDDMMTG--KFCAPDAVTLNTVMCGLLAQGRAEE-ALDVLNRVMPENKIKP 517
Query: 393 GNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
G +N VI G K+ + +A+ + LE + D TYA+I+ G +++ A+K
Sbjct: 518 GVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFW 577
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
++ +Y + ++G C+ +A L ++ DSG +V Y+ +I
Sbjct: 578 DDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRS 637
Query: 513 AMDWETAEKLQAEMKENGLYLKGVTRALIRAVKEMENEAVE 553
+ E + L+ EM++NG VT ++ + + + VE
Sbjct: 638 GLKREAYQILE-EMRKNGQAPDAVTWRILDKLHDSMDLTVE 677
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/302 (18%), Positives = 121/302 (40%), Gaps = 50/302 (16%)
Query: 253 AETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYK 312
A + + ++ R F+ +++ M +S+ E G ++ LC+ ++ A +
Sbjct: 272 AAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVY 331
Query: 313 AVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD------IPGDMRKHAIKPYLAVV 366
+ KG P +S N ++ L + G + A ++L++ P + Y ++
Sbjct: 332 IMKSKGLKPRRTSYNAIIHGLCKDGGCMR-AYQLLEEGSEFEFFPSEY------TYKLLM 384
Query: 367 RALCRVKDVGAAK-----------------------------------QLILDMIANGPP 391
+LC+ D G A+ +++ M+
Sbjct: 385 ESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMM-KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARK 450
P N VI G K+G + A++++ ++ + PD T ++ G G E A
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 451 ILEEAKKNHSVLSPVM-YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+L + + V+ Y++++RG K+ + DEA+ + +++ + V Y +I L
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 510 CL 511
C+
Sbjct: 565 CV 566
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
V K +V +G P + + + + V A+E+ ++ K + + + A++R L
Sbjct: 173 VLKGMVCEGVNPDLECLTIAMDSFVRVH-YVRRAIELFEESESFGVKCSTESFNALLRCL 231
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
C V AAK + + P + +N +I+G+SK+GE+ + +++K + G PD
Sbjct: 232 CERSHVSAAKS-VFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDC 290
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
+Y+ ++ G G + + +I + K +V +Y++++ + FDE+++
Sbjct: 291 LSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRR 350
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
M D +++ Y KL+ L +K A ++ EM G+
Sbjct: 351 MLDEECEPNLETYSKLVSGL-IKGRKVSDALEIFEEMLSRGV 391
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 3/235 (1%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI + G ++E+FD + VP+A Y+ I FD + ++MLD +
Sbjct: 296 LIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE 355
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSV-NFLVGKLAYENGTVPL 342
P+ E ++ L KG+KV +A +++ ++ +G P V +FL +Y G
Sbjct: 356 CEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSY--GPPHA 413
Query: 343 ALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
A+ + + + + Y +++ L R G + +M +G P V+ +++
Sbjct: 414 AMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVD 473
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
G +G + AV +M+ +G P+ + Y+ + S + E A K+ + KK
Sbjct: 474 GLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 172/406 (42%), Gaps = 17/406 (4%)
Query: 108 EGKLENVVSLLQREDADGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWV 167
E KL V LQ+ +++ SL ++ + L D V L R G+ E ++ FF W
Sbjct: 87 EDKLRGV--FLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNR---GNLSGEAMVTFFDWA 141
Query: 168 WKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFY 227
+E VT V ++V ++ ++ +S + L +
Sbjct: 142 VRE--PGVTKDVGS---YSVILRALGRRKLFSFM-MDVLKGMVCEGVNPDLECLTIAMDS 195
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F ++ + A+ELF++ E F + E+++ ++ L S +A SV +IP
Sbjct: 196 FVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPF 253
Query: 288 EEKVGDIL--GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
+ +I+ GW K +V+E V K +VE G P S + L+ L G + ++E
Sbjct: 254 DSCSYNIMISGW-SKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLG-RTGRINDSVE 311
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
+ +I Y A++ +D + + M+ P ++ +++G
Sbjct: 312 IFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
K ++ A+E+ + + SRG+ P + + G AA I ++++K +S
Sbjct: 372 KGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISES 431
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
Y L++ + + L + EM++SG V+ Y+ ++ LC+
Sbjct: 432 AYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCI 477
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Query: 358 AIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV-GEMGQAVEM 416
I + +++ ALCR K+V A LI P + FN V+ G+ V G +A +
Sbjct: 231 GIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKS-FNIVLNGWCNVIGSPREAERV 289
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ + G+K DV +Y+ ++S YS GG + K+ + KK +Y+++V K
Sbjct: 290 WMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAK 349
Query: 477 MEQFDEALKLLTEM-KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
EA L+ M ++ G+ +V Y+ LI+ LC KA E A+++ EM E GL+
Sbjct: 350 ASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC-KARKTEEAKQVFDEMLEKGLF 405
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 162/414 (39%), Gaps = 30/414 (7%)
Query: 127 LESSLDAMDLTLHQDFV--IIALRRNSWGHGLVENLLRFFRWVWKENSSNVTTPVVESLV 184
L + L+ D+ + V I++ RN W E FF W K+ V E
Sbjct: 114 LRNKLEECDVKPSNELVVEILSRVRNDW-----ETAFTFFVWAGKQQG--YVRSVRE--Y 164
Query: 185 HAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDKF 244
H++ S + ++F + W L T+L + Y + GKA + F +
Sbjct: 165 HSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKA-INTFHAY 223
Query: 245 EFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL--GWLCKGK 302
+ F+ + + + AL R+ A + + P + K +I+ GW
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIG 281
Query: 303 KVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP- 361
+EA V+ + G + S + ++ Y G +L + + M+K I+P
Sbjct: 282 SPREAERVWMEMGNVGVKHDVVSYSSMIS--CYSKGG---SLNKVLKLFDRMKKECIEPD 336
Query: 362 ---YLAVVRALCRVKDVGAAKQLILDMIA-NGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
Y AVV AL + V A+ L+ M G P +N +I K + +A ++
Sbjct: 337 RKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
+ +GL P + TY + G E ++L + +K + Y L+R C+
Sbjct: 397 DEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
FD L L EMK+ V + Y +I L L E A EMK+ G+
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNG-KIEEAYGYYKEMKDKGM 506
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 123/277 (44%), Gaps = 9/277 (3%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + + + +L+ + QC PN TY + A R L + A + +++ +
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD ++ + A ++ + G P +S N +V AY +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD--AYGRAGLH 407
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
E + + +M++ I P ++ ++ A + +DV + ++ +M NG P V
Sbjct: 408 SDAEAVFE---EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N ++ Y ++G+ + +++ +E+ D+ TY ++++ Y G +E ++ E K+
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
+ V + S + Y + + + + L++ EM DSG
Sbjct: 525 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 25/323 (7%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI + Q K A L+ + + VP +TY I+A L + A V +M
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 281 DAQSIPDEEKV----GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV---GKL 333
+ P V I G + + +EA V++ + P + N ++ GK
Sbjct: 240 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 299
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANG 389
+ + L E MR H KP Y A+V A R A+++ + +G
Sbjct: 300 SKSYMSWKLYCE--------MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 390 PPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAAR 449
P V+N ++ YS+ G A E+ L++ G +PD +Y ++V Y G A
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 450 KILEEAKKNHSVLSPVM--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQ 507
+ EE K+ ++P M + L+ Y K + ++ EM ++GV + ++
Sbjct: 412 AVFEEMKRLG--IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML- 468
Query: 508 SLCLKAMDWETAEKLQAEMKENG 530
+L + + EK+ AEM ENG
Sbjct: 469 NLYGRLGQFTKMEKILAEM-ENG 490
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 118/284 (41%), Gaps = 4/284 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ ++ I A + + A S+ ++L+++ +P E+ ++ C ++ A V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 311 YKAVVEKGKYPPMSSV---NFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
+ P V N + L G A+++ + + D K + Y ++
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
+ + +L +M ++ P + ++ +++ G +A E+ + L+ GL+P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
DVY Y ++ YS G A +I + Y+ +V Y + +A +
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
EMK G+ ++ + L+ S KA D E + EM ENG+
Sbjct: 415 EEMKRLGIAPTMKSH-MLLLSAYSKARDVTKCEAIVKEMSENGV 457
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 37/297 (12%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
GN + A+++F + + +C P ETY+ I LY + S S +S K+
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMIN-LYGKA---SKSYMSWKLY----------- 309
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ CK P + + LV A E G A E+ + +
Sbjct: 310 CEMRSHQCK--------------------PNICTYTALVNAFARE-GLCEKAEEIFEQLQ 348
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
D + + Y A++ + R A ++ M G P A +N ++ Y + G
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A + + ++ G+ P + ++ +++S YS ++ I++E +N + +S++
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKE 528
Y ++ QF + K+L EM++ + Y+ LI ++ KA E E+L E+KE
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILI-NIYGKAGFLERIEELFVELKE 524
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 15/279 (5%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
+ + LI +L + A+ +F + + P+ Y+ I + LF A + ++M
Sbjct: 227 LYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM 286
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+A +P+ +L + K EA +V+ + E +++ N ++
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMID-------- 338
Query: 340 VPLALEMLKD---IPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPP 392
V L+M+K+ + +RK I+P Y ++R + G A L M
Sbjct: 339 VYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQ 398
Query: 393 GNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
+N +I Y K E +A +++ ++SRG++P+ TY+ I+S + G+++ A +
Sbjct: 399 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 458
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
++ + + + V+Y +++ Y ++ A +LL E+K
Sbjct: 459 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK 497
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 7/286 (2%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F + G +AL K E + + Y I+ R + A S+ ++ +
Sbjct: 196 LITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSG 255
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
PD ++ K K +EA + K + E G P S + L+ + EN A
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS-VYVENHKFLEA 314
Query: 344 LEM---LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
L + +K++ + + V L VK+ A +L + P +N +
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKE---ADRLFWSLRKMDIEPNVVSYNTI 371
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ Y + G+A+ + +L++ + ++ +V TY ++ Y E E A +++E +
Sbjct: 372 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLI 506
+ + Y +++ + K + D A L +++ SGV I Y +I
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 325 SVNFLVGKLAYENG-TVPLAL-----EMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAA 378
S+ F+V L+ EN LAL E K P ++ Y V+R + R K A
Sbjct: 121 SIRFMVSLLSRENDWQRSLALLDWVHEEAKYTP------SVFAYNVVLRNVLRAKQFDIA 174
Query: 379 KQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSG 438
L +M P ++ +IT + K G A+ ++ +E + D+ Y+ ++
Sbjct: 175 HGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL 234
Query: 439 YSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRIS 498
+ A I K++ V Y+S++ Y K + F EA L+ EM ++GV +
Sbjct: 235 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 499 VDEYDKLIQSLCLKAMDWETAEKLQAEMKE 528
Y L+ S+ ++ + A + AEMKE
Sbjct: 295 TVSYSTLL-SVYVENHKFLEALSVFAEMKE 323
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIAN--GPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
+ + + A CR + + A L D + P V+N V+ GY K G+M +A+ +
Sbjct: 160 FRSAIDAYCRARKMDYA-LLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
+ KPDV T+ ++++GY + + A + E K+ + V +++L+RG+ +
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+E +K+ EM + G R S + L+ LC
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 382 ILDMIANGPPPGNA----------VFNFVITGYSKVGEMGQAV----EMMKLLESRGLKP 427
+L +A P P ++ +F I Y + +M A+ M +L++ KP
Sbjct: 135 LLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG---KP 191
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
+V Y +V+GY G+M+ A + + K + ++ L+ GYC+ +FD AL L
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLF 251
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
EMK+ G +V ++ LI+ L + E K+ EM E G T
Sbjct: 252 REMKEKGCEPNVVSFNTLIRGF-LSSGKIEEGVKMAYEMIELGCRFSEAT 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y VV + D+ A + M P FN +I GY + + A+++ + ++
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
+G +P+V ++ ++ G+ + G++E K+ E + S LV G C+ + D
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
+A L+ ++ + V S +Y L++ LC E EM E L+ KG T I
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLC-----GENKAVRAMEMMEE-LWKKGQTPCFI 369
Query: 542 RAVKEME 548
+E
Sbjct: 370 ACTTLVE 376
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 1/253 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI + + AL+LF + + C PN +++ I+ + ++ +M+
Sbjct: 231 FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMI 290
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ E ++ LC+ +V +A + ++ K P LV KL EN V
Sbjct: 291 ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAV 350
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
A+EM++++ + +V L + A + M+ G P + FN +
Sbjct: 351 -RAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLL 409
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ A + L S+G +PD TY V+VSG++ G + ++ E
Sbjct: 410 LRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM 469
Query: 461 VLSPVMYHSLVRG 473
+ Y+ L+ G
Sbjct: 470 LPDIFTYNRLMDG 482
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 15/249 (6%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN Y+ + + D A Q+M ++ PD ++ C+ K A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 311 YKAVVEKGKYPPMSSVNFLV------GKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLA 364
++ + EKG P + S N L+ GK+ E G V +A EM++ G A L
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKI--EEG-VKMAYEMIE--LGCRFSEATCEIL- 304
Query: 365 VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
V LCR V A L+LD++ P + ++ + +A+EMM+ L +G
Sbjct: 305 -VDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA- 483
P +V G G E A +E+ + V ++ L+R C + +A
Sbjct: 364 QTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDAN 423
Query: 484 -LKLLTEMK 491
L+LL K
Sbjct: 424 RLRLLASSK 432
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 94/224 (41%), Gaps = 1/224 (0%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI F G + +++ + C + T + L R D A + +L
Sbjct: 266 FNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ + +P E G ++ LC K A + + + +KG+ P + LV L T
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
+ M K + + ++ + ++R LC A +L L + G P ++ +
Sbjct: 386 KASGFMEKMMNAGILPDSVT-FNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
++G++K G + ++ + + + PD++TY ++ G S G+
Sbjct: 445 VSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNF-LVGKLAYENGTVPLAL 344
PDE G +L LCK VK+A +++ + + ++P VN L Y V +
Sbjct: 216 PDEYVFGCLLDALCKHGSVKDAAKLFEDM--RMRFP----VNLRYFTSLLYGWCRVGKMM 269
Query: 345 EMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
E K + M + +P Y ++ + A L+ DM G P + +
Sbjct: 270 EA-KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
I KV M +A+++ +E + DV TY +VSG+ G+++ +L++ K
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
+ S + Y ++ + K E F+E L+L+ +M+ + Y+ +I+ C K + + A
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLAC-KLGEVKEAV 447
Query: 521 KLQAEMKENGL 531
+L EM+ENGL
Sbjct: 448 RLWNEMEENGL 458
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 3/176 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PNA Y IQAL + + A V +M + D ++ CK K+ + + V
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENG-TVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+++KG P S + ++ +A+E + LE+++ + I Y V+R
Sbjct: 380 LDDMIKKGLMP--SELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
C++ +V A +L +M NG PG F +I G + G + +A + K + +RGL
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGN-AVFNFVITGYSKVGEMGQAVE 415
H+I+ Y ++V+ L +++ GA LI +M P +F ++ ++ + +A+E
Sbjct: 145 HSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIE 204
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
++ + G +PD Y + ++ G ++ A K+ E+ + V + + SL+ G+C
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWC 263
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLI 506
++ + EA +L +M ++G + +Y L+
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLL 294
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 123/277 (44%), Gaps = 9/277 (3%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + + + +L+ + QC PN TY + A R L + A + +++ +
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
PD ++ + A ++ + G P +S N +V AY +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD--AYGRAGLH 385
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
E + + +M++ I P ++ ++ A + +DV + ++ +M NG P V
Sbjct: 386 SDAEAVFE---EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N ++ Y ++G+ + +++ +E+ D+ TY ++++ Y G +E ++ E K+
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
+ V + S + Y + + + + L++ EM DSG
Sbjct: 503 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 25/323 (7%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N LI + Q K A L+ + + VP +TY I+A L + A V +M
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 281 DAQSIPDEEKV----GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLV---GKL 333
+ P V I G + + +EA V++ + P + N ++ GK
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANG 389
+ + L E MR H KP Y A+V A R A+++ + +G
Sbjct: 278 SKSYMSWKLYCE--------MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 390 PPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAAR 449
P V+N ++ YS+ G A E+ L++ G +PD +Y ++V Y G A
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Query: 450 KILEEAKKNHSVLSPVM--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQ 507
+ EE K+ ++P M + L+ Y K + ++ EM ++GV + ++
Sbjct: 390 AVFEEMKRLG--IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML- 446
Query: 508 SLCLKAMDWETAEKLQAEMKENG 530
+L + + EK+ AEM ENG
Sbjct: 447 NLYGRLGQFTKMEKILAEM-ENG 468
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 118/284 (41%), Gaps = 4/284 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ ++ I A + + A S+ ++L+++ +P E+ ++ C ++ A V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 311 YKAVVEKGKYPPMSSV---NFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
+ P V N + L G A+++ + + D K + Y ++
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
+ + +L +M ++ P + ++ +++ G +A E+ + L+ GL+P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
DVY Y ++ YS G A +I + Y+ +V Y + +A +
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
EMK G+ ++ + L+ S KA D E + EM ENG+
Sbjct: 393 EEMKRLGIAPTMKSH-MLLLSAYSKARDVTKCEAIVKEMSENGV 435
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 37/297 (12%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
GN + A+++F + + +C P ETY+ I LY + S S +S K+
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMIN-LYGKA---SKSYMSWKLY----------- 287
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ CK P + + LV A E G A E+ + +
Sbjct: 288 CEMRSHQCK--------------------PNICTYTALVNAFARE-GLCEKAEEIFEQLQ 326
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
D + + Y A++ + R A ++ M G P A +N ++ Y + G
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
A + + ++ G+ P + ++ +++S YS ++ I++E +N + +S++
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKE 528
Y ++ QF + K+L EM++ + Y+ LI ++ KA E E+L E+KE
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILI-NIYGKAGFLERIEELFVELKE 502
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 134/341 (39%), Gaps = 47/341 (13%)
Query: 233 NGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV- 291
N L F+ C P + Y F I+ L + S ++ SSV + ++ E +
Sbjct: 52 NASVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIF 111
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
D++ +++EA V+ + P ++N L+ L + ++ L E+L
Sbjct: 112 RDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKAC 171
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLIL----DMIANGP----------------- 390
+ + ++ ALCR+ +V A +L+ D + P
Sbjct: 172 RMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSS 231
Query: 391 ----------------PPG----NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
PG V F++ G G + V ++ ++ ++PD+
Sbjct: 232 CFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEG----GRGKEVVSVLNQMKCDRVEPDLV 287
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
Y +++ G + A K+ +E Y+ + G CK + ALK+++ M
Sbjct: 288 CYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM 347
Query: 491 KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G +V Y+ LI++L +KA D A+ L EM+ NG+
Sbjct: 348 NKLGSEPNVVTYNILIKAL-VKAGDLSRAKTLWKEMETNGV 387
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 134/341 (39%), Gaps = 37/341 (10%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNA------------------------- 253
+I +I + G + A+E+F K F+CVP+A
Sbjct: 109 SIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILV 168
Query: 254 -----------ETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGK 302
T+ I AL R D A+ + + M I D +L +CK K
Sbjct: 169 KACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK 228
Query: 303 KVKEAHAV-YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP 361
+ Y + K ++ P +V + E G + +L + D + +
Sbjct: 229 DSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVC 288
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y V++ + +D A +L +++ G P +N I G K ++ A++MM +
Sbjct: 289 YTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMN 348
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
G +P+V TY +++ G++ A+ + +E + N + + ++ Y ++++
Sbjct: 349 KLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVV 408
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKL 522
A LL E + V + +++I LC K + + E L
Sbjct: 409 CAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 123/271 (45%), Gaps = 22/271 (8%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
+YH I+ L ++ + ++L + I +E I+ + K K+ A +++ +
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 315 VEKGKY---PPMSSVNFLV------GKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAV 365
V P + + + L G +Y N + +E ++ + M I+P +
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINH---VYMETVRSLFRQMVDSGIEPDVFA 290
Query: 366 VRALCRVK------DVGAAKQLILDM-IANGPPPGNAVFNFVITGYSKVGEMGQAVEMMK 418
+ C VK V A ++ M + P + ++++I G G A E++
Sbjct: 291 LN--CLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLS 348
Query: 419 LLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
++ +G P+ +Y +V+ ++ GE++ A K L E +N V+ + Y +LV C+
Sbjct: 349 EMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKG 408
Query: 479 QFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
++DEA +LL +++ + + D YDKL+ L
Sbjct: 409 KYDEATRLLEMLREKQL-VDRDSYDKLVNVL 438
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 1/281 (0%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
ALE+ + + PN TY I L + A +M + P+ ++
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRK 356
K K+ + +VYK +++ P + + + L+ L N V A++ML +
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHN-RVDEAIKMLDLMISKGCT 185
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ Y + + V +L+ DM G N +I GY + G++ A+ +
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ S GL P++ +Y ++++G GE+E A E +K + L + Y ++ G CK
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
EA L ++K V Y +I L M E
Sbjct: 306 ACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTE 346
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 10/258 (3%)
Query: 278 KMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
KM+ PD ++ C +K+A V + + G + L+ L
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 338 GTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
VP ALE+LK M+ I P Y +++ LC+ + A++ + +M + P
Sbjct: 63 LVVP-ALEVLKR----MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 117
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
F+ +I Y+K G++ + + K++ + P+V+TY+ ++ G ++ A K+L+
Sbjct: 118 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
+ V Y +L G+ K + D+ +KLL +M GV + + LI+ +A
Sbjct: 178 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY-FQA 236
Query: 514 MDWETAEKLQAEMKENGL 531
+ A + M NGL
Sbjct: 237 GKIDLALGVFGYMTSNGL 254
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 110/264 (41%), Gaps = 13/264 (4%)
Query: 260 IQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGK 319
I L ++ L A V ++M D P+ ++ LCK ++ +A + K
Sbjct: 55 IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 114
Query: 320 YPPMSSVNFLV------GKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVK 373
P + + + L+ GKL+ + + ++M D P + Y +++ LC
Sbjct: 115 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSID-PN------VFTYSSLIYGLCMHN 167
Query: 374 DVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYA 433
V A +++ MI+ G P ++ + G+ K + ++++ + RG+ + +
Sbjct: 168 RVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 434 VIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS 493
++ GY G+++ A + N + + Y+ ++ G + ++AL M+ +
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKT 287
Query: 494 GVRISVDEYDKLIQSLCLKAMDWE 517
+ + Y +I +C M E
Sbjct: 288 RNDLDIITYTIMIHGMCKACMVKE 311
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%)
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P +N +I G+ K + A M+ + S+G PDV T++ +++GY ++ +I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
E + V + V Y +L+ G+C++ D A LL EM GV + ++ LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 512 K 512
K
Sbjct: 128 K 128
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y +++ C+ V AK+++ M + G P F+ +I GY K + +E+ +
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
RG+ + TY ++ G+ G+++AA+ +L E + +H ++ G C ++
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 482 EALKLLTEMKDS 493
+A +L +++ S
Sbjct: 133 KAFAILEDLQKS 144
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 365 VVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
+++ LC ++ AA QL+ + P F+ +I G+ G+ +A ++++ +E
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
++PD T+ +++SG G +E +LE K +P Y ++ G ++ EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLC----LKAMDW 516
+++++M G+R S Y K++ LC + MDW
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDW 363
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 329 LVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN 388
+ G LA G + A+E+L +P + K + ++ L K ++ +
Sbjct: 140 IYGNLA---GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL 196
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G N +I G + G + A++++ + +P+V T++ ++ G+ N G+ E A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
K+LE +K + ++ L+ G K + +E + LL MK G + Y +++
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 509 LCLKAMDWETAEKL 522
L K + E E +
Sbjct: 317 LLDKKRNLEAKEMM 330
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 354 MRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANG--PPPGNAVFNFVITGYSKV 407
M+++ KP Y ++ ALCRV + A+ L+ M G PP + +I+ Y +
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 408 G-----------EMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
G M +A M + + RG PDV TY ++ G + A ++ E+ K
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI-SVDEYDKLIQSLCLKAMD 515
V + V Y+S +R Y + + A++++ MK G + Y LI +L ++
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHAL-VETRR 369
Query: 516 WETAEKLQAEMKENGLYLKGVTRALI 541
A L EM E GL + T L+
Sbjct: 370 AAEARDLVVEMVEAGLVPREYTYKLV 395
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 7/200 (3%)
Query: 347 LKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
LK PG KH Y +V L R K G +L+ +M+ +G P +N +I Y +
Sbjct: 349 LKRQPG--FKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGR 406
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP-- 464
+ +A+ + ++ G +PD TY ++ ++ G ++ A + + ++ + LSP
Sbjct: 407 ANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE--AGLSPDT 464
Query: 465 VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQA 524
Y ++ K A +L EM G ++ ++ +I +L KA ++ETA KL
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKARNYETALKLYR 523
Query: 525 EMKENGLYLKGVTRALIRAV 544
+M+ G VT +++ V
Sbjct: 524 DMQNAGFQPDKVTYSIVMEV 543
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 125/285 (43%), Gaps = 10/285 (3%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+ TY + L R F + + +M+ P+ ++ + +KEA V+
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVR 367
+ E G P + L+ + + G + +A++M + M++ + P Y ++
Sbjct: 418 NQMQEAGCEPDRVTYCTLI-DIHAKAGFLDIAMDMYQR----MQEAGLSPDTFTYSVIIN 472
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
L + + AA +L +M+ G P FN +I ++K A+++ + +++ G +P
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
D TY++++ + G +E A + E ++ + V +Y LV + K D+A +
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
M +G+R +V + L+ + L+ A L M GL+
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTF-LRVHRMSEAYNLLQSMLALGLH 636
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N+LI + + K A+ +F++ + C P+ TY I + D A + Q+M +
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
A PD I+ L K + AH ++ +V +G P + + N ++ L +
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA-LHAKARNYE 516
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
AL++ + DM+ +P Y V+ L + A+ + +M P V+
Sbjct: 517 TALKLYR----DMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVY 572
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
++ + K G + +A + + + GL+P+V T ++S + M A +L+
Sbjct: 573 GLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 16/264 (6%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+ Y I+ ++ A V KML + + V IL C+ EA+ +
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+K E N L + G V A+E+ +++ G + Y ++ C
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALG-KLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC 442
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
A L+++M G P ++N + G + G +A E +K++E+RG+KP
Sbjct: 443 LQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYV 502
Query: 431 TYAVIVSGYSNGGEMEAARKILE----EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
T+ +++ G + GE++ A E ++++N + S+V+G+C D A +
Sbjct: 503 THNMVIEGLIDAGELDKAEAFYESLEHKSRENDA--------SMVKGFCAAGCLDHAFER 554
Query: 487 LTEMKDSGVRISVDEYDKLIQSLC 510
++ + Y L SLC
Sbjct: 555 FIRLE---FPLPKSVYFTLFTSLC 575
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 140/350 (40%), Gaps = 51/350 (14%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN LI G + F + E +A TY +QAL+R+
Sbjct: 185 LNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRND------------- 231
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
D+E++ +L L ++ + + P + +NF+ G + +
Sbjct: 232 ------DKEELEKLLSRL---------------LISETRNPCVFYLNFIEGLCLNQMTDI 270
Query: 341 P-LALEMLKD--IPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
L+ L+D I D I Y VVR LC + A+ ++LDM +G P V+
Sbjct: 271 AYFLLQPLRDANILVDKSDLGI-AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVY 329
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+ +I G+ K + +AV++ + + + + + I+ Y G A + +E ++
Sbjct: 330 SAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE 389
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA---- 513
+ L V Y+ K+ + +EA++L EM G+ V Y LI CL+
Sbjct: 390 TNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSD 449
Query: 514 -------MD--WETAEKLQAEMKENGLYLKGVTRALIRAVKEMENEAVEP 554
MD +T + + + GL G+ + +K MEN V+P
Sbjct: 450 AFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 28/256 (10%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
+I + +L K A LF+ + P+ TY + + D + ++M
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFD 693
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
IPD ++ C +K+ +A++K + + P + + TV L
Sbjct: 694 VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTY------------TVLLK 741
Query: 344 LEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+ +++ +M+ +KP Y ++ C++ D+G AK++ MI +G P A +
Sbjct: 742 NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 801
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA---- 455
+I K+G + +A + + G+KPDV Y +++G G + A K+++E
Sbjct: 802 LIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Query: 456 -KKNHSVLSPVMYHSL 470
K + LS V Y L
Sbjct: 862 IKPTKASLSAVHYAKL 877
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 125/334 (37%), Gaps = 43/334 (12%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTI--QALYRHSLFDSASSVSQKMLDAQSI 285
F G A E F + EF P ++ +FT+ A + +M
Sbjct: 542 FCAAGCLDHAFERFIRLEF----PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVE 597
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE 345
P++ G ++G C+ V++A ++ +V K P + + ++ N P
Sbjct: 598 PEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE--PKQAY 655
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
L + DM++ +KP + L K+ +M A P + +I Y
Sbjct: 656 ALFE---DMKRRDVKPDVVTYSVLLNSDPELDMKR---EMEAFDVIPDVVYYTIMINRYC 709
Query: 406 KVGEMGQAVEMMKLLESR----------------------------GLKPDVYTYAVIVS 437
+ ++ + + K ++ R +KPDV+ Y V++
Sbjct: 710 HLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLID 769
Query: 438 GYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
G++ A++I ++ ++ Y +L+ CKM EA + M +SGV+
Sbjct: 770 WQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKP 829
Query: 498 SVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
V Y LI C + A KL EM E G+
Sbjct: 830 DVVPYTALIAGCCRNGFVLK-AVKLVKEMLEKGI 862
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G P NF+I+ G V +E GL D +TY ++V + E
Sbjct: 177 GRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEEL 236
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDE----YDK 504
K+L + + V Y + + G C + D A LL ++D+ + + + Y K
Sbjct: 237 EKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRK 296
Query: 505 LIQSLCLKAMDWETAEKLQAEMKENGL 531
+++ LC + M E AE + +M+++G+
Sbjct: 297 VVRGLCYE-MRIEDAESVVLDMEKHGI 322
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 113/278 (40%), Gaps = 15/278 (5%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
++ KLI + ++ N + A E F+ + VP+ TY I R + A ++ +
Sbjct: 601 SMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFED 660
Query: 279 MLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
M PD +L + +E A P + ++ + + N
Sbjct: 661 MKRRDVKPDVVTYSVLLNSDPELDMKREMEAF-------DVIPDVVYYTIMINRYCHLND 713
Query: 339 TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
L+ + + DM++ I P + L + K + L +M A P +
Sbjct: 714 -----LKKVYALFKDMKRREIVPDVVTYTVLLKNK---PERNLSREMKAFDVKPDVFYYT 765
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I K+G++G+A + + G+ PD Y +++ G ++ A+ I + ++
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
V Y +L+ G C+ +A+KL+ EM + G++
Sbjct: 826 GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 135/325 (41%), Gaps = 20/325 (6%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
LN LI Y S+ +++ + PN T IQ L + + ++
Sbjct: 202 LNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRIC 261
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ +P ++ + + +++E+ ++ K ++ K + +V A E V
Sbjct: 262 GKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLV 321
Query: 341 PLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
+ + +M + Y VR C DV A++L+ +M +G P +
Sbjct: 322 SA-----RKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDET 376
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
FN +I G+++ G + +E +++ +RGL P + +V S + A +IL ++
Sbjct: 377 FNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSI 436
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
V Y L+RG+ + D+ALKL EM+ + + + LI LC
Sbjct: 437 DKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLC------ 490
Query: 517 ETAEKLQAEMKENGLYLKGVTRALI 541
T K++A K YLK + + LI
Sbjct: 491 -TCGKVEAGEK----YLKIMKKRLI 510
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 24/306 (7%)
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
G K ++L D+ +C+P+ + + + + S+ +++L + D
Sbjct: 248 GRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGY 307
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
++ K + A V+ ++++G + S V + ++ E G V A +L
Sbjct: 308 SIVVYAKAKEGDLVSARKVFDEMLQRG-FSANSFVYTVFVRVCCEKGDVKEAERLL---- 362
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILD---------MIANGPPPGNAVFNFVIT 402
+M + + PY L +G + + M+ G P + FN ++
Sbjct: 363 SEMEESGVSPYDETFNCL-----IGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVK 417
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVL 462
SK+ + +A E++ +G PD +TY+ ++ G+ G +++ A K+ E + + +
Sbjct: 418 SVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEME--YRKM 475
Query: 463 SP--VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
SP ++ SL+ G C + + K L MK + + D YD LI++ K D A+
Sbjct: 476 SPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAF-QKIGDKTNAD 534
Query: 521 KLQAEM 526
++ EM
Sbjct: 535 RVYNEM 540
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 143/334 (42%), Gaps = 46/334 (13%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
L+K + S+L ++ALELFD F PNA + + L R+ A +V + M
Sbjct: 110 LSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMR 169
Query: 281 DAQSI-------------------------------PDEEKVGDILGW-----LC-KGKK 303
+++ P D++ + LC +
Sbjct: 170 KKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINN 229
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD---MRKHAIK 360
V E +++ + G + + LV + G LAL++ ++ + +R+ A+
Sbjct: 230 VYETERIWRVMKGDGHIGTEITYSLLVS-IFVRCGRSELALDVYDEMVNNKISLREDAM- 287
Query: 361 PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLL 420
A++ A + + A ++ M+ G P N +I K G++G ++ +L
Sbjct: 288 --YAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVL 345
Query: 421 ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK-KNHSVLSPVMYHSLVRGYCKMEQ 479
+S G KPD YT+ +++ E ++ + + +N L+ +Y++ + K+
Sbjct: 346 KSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGY 405
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
+++A+KLL EM+ SG+ +S Y+ L+ S C K+
Sbjct: 406 WEKAVKLLYEMEGSGLTVSTSSYN-LVISACEKS 438
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 10/289 (3%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
TY + R + A V +M++ + E+ + ++ K +K A +++++
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSM 310
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKD 374
++KG P + + N L+ L + G V L ++ + K + A++ AL +
Sbjct: 311 LKKGMKPNLVACNTLINSLG-KAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANR 369
Query: 375 VGAAKQLILDMI--ANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTY 432
QL DMI N ++N + K+G +AV+++ +E GL +Y
Sbjct: 370 YEDVLQL-FDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSY 428
Query: 433 AVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKD 492
+++S + + A + E + + Y SLVR +DE +L +
Sbjct: 429 NLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKK--- 485
Query: 493 SGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALI 541
V V Y+ I +CL+ +++ A++L +M+E GL G TRA++
Sbjct: 486 --VEPDVSLYNAAIHGMCLRR-EFKFAKELYVKMREMGLEPDGKTRAMM 531
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 17/310 (5%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
N L F N + + +K E P+ TY+ + + R A + + M
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
+ +PD ++ LCK +V+EAH + +V++G P S N L+ E G +
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKE-GMM 357
Query: 341 PLALEMLKDIPGD-------MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
+ ++L ++ G+ K ++ ++ R L V V ++L +D+
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDI-------P 410
Query: 394 NAVFNFVITGYSKVGEMGQAVEMM-KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
V +F+I + G+ A ++ +++E G + TY ++ S +E A +
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLK 470
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
+ K + VL Y +L+ C++ + EA L+ EM DS V+ L+ C K
Sbjct: 471 GKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYC-K 529
Query: 513 AMDWETAEKL 522
+D++ AE+L
Sbjct: 530 ELDFDKAERL 539
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
M G P FN + + + + ++ +E G +PD+ TY +VS Y G
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 445 MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDK 504
++ A + + + V V Y SL++G CK + EA + M D G++ Y+
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 346
Query: 505 LIQSLCLKAMDWETAEKLQAEMKENGL 531
LI + C + M + ++KL EM N +
Sbjct: 347 LIYAYCKEGM-MQQSKKLLHEMLGNSV 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 89/225 (39%), Gaps = 9/225 (4%)
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAV 365
VY + G +P + N L ++ + D M + +P Y +
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSN-----FREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
V + CR + A L M P + +I G K G + +A + + RG+
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
KPD +Y ++ Y G M+ ++K+L E N V +V G+ + + A+
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+ E++ V I + D LI SLC + + L ++E G
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEG 442
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 362 YLAVVRALCRVKDVGAAKQLIL--DMIANGPPPGNA-VFNFVITGYSKVGEMGQAVEMMK 418
+ +V ALC K V A++L ++I NG N + N ++ G+SK+G G+ E K
Sbjct: 154 FYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWK 213
Query: 419 LLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
+++ G+ D+++Y++ + G+ A K+ +E K L V Y++++R +
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 479 QFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ +++ EM++ G +V ++ +I+ LC
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLC 305
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 343 ALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
A+++ K++ K + Y V+RA+ + V ++ +M G P A N +I
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE-AKKNHSV 461
+ G M A M+ + RG +PD TY + S +E +IL + S
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS------RLEKPSEILSLFGRMIRSG 356
Query: 462 LSPVM--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ P M Y L+R + + L + MK+SG Y+ +I +L K M + A
Sbjct: 357 VRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGM-LDMA 415
Query: 520 EKLQAEMKENGL 531
+ + EM E GL
Sbjct: 416 REYEEEMIERGL 427
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y ++ + L V V A++++ +M+ +G PG + +I Y ++G + AV++ + +E
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAA---RKILEE--AKKNHSVLSPVMYHSLVRGYCK 476
G+KP+ Y +++G++ G +E A +++EE + NH VL+ SL++ Y K
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT-----SLIKAYSK 667
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
+ +EA ++ +MKDS V + ++ SLC AE + ++E G
Sbjct: 668 VGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNALREKG 720
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 62/120 (51%)
Query: 378 AKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVS 437
A L +M+ +G P FN +I G + +A ++K +E +G+ PD TY +++S
Sbjct: 324 AANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLS 383
Query: 438 GYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRI 497
+++ G++EAA + + +K V + +++ C+ + E ++ EM + +RI
Sbjct: 384 LHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRI 443
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 146/347 (42%), Gaps = 40/347 (11%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSV--SQKMLDAQSIPDEEKVGDI 294
A LF++F+ CV ++ T I L+ A +V ++ + Q D + +
Sbjct: 464 AKALFERFQL-DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQR-NDVLEYNVM 521
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDM 354
+ K K ++A +++K + +G +P + N L LA + V A +L ++
Sbjct: 522 IKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVD-LVDEAQRILAEMLDSG 580
Query: 355 RKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAV 414
K K Y A++ + R+ + A L M G P V+ +I G+++ G + +A+
Sbjct: 581 CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAI 640
Query: 415 EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK---------KNHSVLS-- 463
+ +++E G++ + ++ YS G +E AR++ ++ K ++S+LS
Sbjct: 641 QYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLC 700
Query: 464 -----------------------PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVD 500
+ + +++ Y M DEA+++ EM++SG+
Sbjct: 701 ADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCT 760
Query: 501 EYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLK-GVTRALIRAVKE 546
+++++ E E + E L L G + L +K+
Sbjct: 761 SFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKK 807
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 139/321 (43%), Gaps = 26/321 (8%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N +I + + + AL LF + P+ TY+ Q L L D A + +MLD
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ P + ++ + + +A +Y+A+ + G P L+ A E+G V
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA-ESGMVE 637
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
A++ + M +H ++ ++++A +V + A+++ M + P A
Sbjct: 638 EAIQYFR----MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N +++ + +G + +A + L +G DV ++A ++ Y G ++ A ++ EE ++
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWE 517
+ + ++ ++ Y Q E +L EM L++ L +DW
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEM--------------LVERKLL--LDWG 796
Query: 518 TAEKLQAEMKENGLYLKGVTR 538
T + L +K+ G+ + V++
Sbjct: 797 TFKTLFTLLKKGGVPSEAVSQ 817
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 137/352 (38%), Gaps = 83/352 (23%)
Query: 233 NGKAALELF---DKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEE 289
+ ALE F F F + + TY L FD+ + +M D+ +P ++
Sbjct: 55 SASGALETFRWASTFPGF--IHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDD 112
Query: 290 KVG-DILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALE--- 345
+ I+ + + +K +V V + G P + N ++ L E+ + +A E
Sbjct: 113 AIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED--IDIAREFFT 170
Query: 346 ---MLKDIPGD--------------------------MRKHAIKP----YLAVVRALCRV 372
M I GD M+ + P Y ++ ALC+
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 373 KDVGAAKQLILDMIANGPPPGNAVFNFVITGY---------------------------- 404
VG A+ L+ +M P + FN +I+ Y
Sbjct: 231 GKVGRARSLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTV 286
Query: 405 SKV-------GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
+KV G + +A+E+++ +ES+G K DV +V GY G+M A++ E ++
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMER 346
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
+ + Y+ L+ GYC + D AL +MK +R + ++ LI+ L
Sbjct: 347 KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGL 398
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 144/325 (44%), Gaps = 52/325 (16%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
IL K + +++G+G L++ + PNA Y+ + AL ++ A S+ +M
Sbjct: 187 ILMKGLSLTNRIGDGFKLLQIM---KTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
Query: 280 LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGT 339
+ P++ ++ C +K+ ++ + + G P + +V ++ L E G
Sbjct: 244 KE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE-GR 298
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
V ALE+L+ RV+ G +D++A N
Sbjct: 299 VSEALEVLE----------------------RVESKGGK----VDVVAC---------NT 323
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ GY +G+M A +E +G P+V TY ++++GY + G +++A + K +
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS----GVRISVDEYDKLIQSLCLKAMD 515
+ +++L+RG + D+ LK+L M+DS G RI D Y+ +I K
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI--DPYNCVIYGF-YKENR 440
Query: 516 WETAEKLQAEMKENGLYLKGVTRAL 540
WE A L+ +K L+ + V R+
Sbjct: 441 WEDA--LEFLLKMEKLFPRAVDRSF 463
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 42/197 (21%)
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIAN-GPPPGNAVFNFVITGYSKVGEMGQAVE 415
H+ Y A+ LC + QL+ +M + G PP +A+F +I G+ + + + +
Sbjct: 74 HSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVIS 133
Query: 416 MMKLLESRGLKP-----------------------------------DVYTYAVIVSGYS 440
++ L+ G+KP DVYTY +++ G S
Sbjct: 134 VVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLS 193
Query: 441 NGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK---DSGVRI 497
+ K+L+ K + + V+Y++L+ CK + A L++EMK D I
Sbjct: 194 LTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNI 253
Query: 498 SVDEY---DKLIQSLCL 511
+ Y KLIQS+ L
Sbjct: 254 LISAYCNEQKLIQSMVL 270
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 128/350 (36%), Gaps = 70/350 (20%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
PN T++ I A + + +K +PD V ++ LC +V EA V
Sbjct: 246 PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 311 YKAVVEKGKYPPMSSVNFLV------GKLAY---------ENGTVPLA------------ 343
+ V KG + + N LV GK+ G +P
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCD 365
Query: 344 ---LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQ---LILDMIANGPPPGNAV- 396
L+ D DM+ AI+ A L R +G IL+M+ + A
Sbjct: 366 VGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI 425
Query: 397 --FNFVITGYSKVGEMGQAVE------------------MMKLLESRGLK---------- 426
+N VI G+ K A+E ++ L E G+
Sbjct: 426 DPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI 485
Query: 427 -----PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
P + ++ YS G++E + +++ + + +++++ G+CK ++
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+K + +M + G + Y+ L++ LC+K D + A L + M E +
Sbjct: 546 NGIKFVEDMAERGCVPDTESYNPLLEELCVKG-DIQKAWLLFSRMVEKSI 594
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 7/234 (2%)
Query: 277 QKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYE 336
+K + ++ P+ +L LCK VKE A+ + + + K P ++ N L +
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVK-PDANTFNVLF--FGWC 279
Query: 337 NGTVPL-ALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP---P 392
P A+++L+++ K Y A + C+ V A L MI G P
Sbjct: 280 RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAP 339
Query: 393 GNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKIL 452
F +I +K + + E++ + S G PDV TY ++ G +++ A K L
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 453 EEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLI 506
+E V Y+ +R C+ + DEALKL M +S SV Y+ LI
Sbjct: 400 DEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 13/197 (6%)
Query: 321 PPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL----CRVKDVG 376
P +++ N L+ L + G V +L+ + +H +KP L CRV+D
Sbjct: 232 PEINAFNMLLDALC-KCGLVKEGEALLRRM-----RHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 377 AAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK---PDVYTYA 433
A +L+ +MI G P N + I + + G + +A ++ + ++G P T+A
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 434 VIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS 493
+++ + + E +++ + Y ++ G C E+ DEA K L EM +
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 494 GVRISVDEYDKLIQSLC 510
G + Y+ ++ LC
Sbjct: 406 GYPPDIVTYNCFLRVLC 422
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 109/263 (41%), Gaps = 6/263 (2%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAV 310
P+A T++ R A + ++M++A P+ + C+ V EA +
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 311 YKAVVEKGKY---PPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
+ ++ KG P + ++ LA +N E++ + + Y V+
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALA-KNDKAEECFELIGRMISTGCLPDVSTYKDVIE 384
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM-KLLESRGLK 426
+C + V A + + +M G PP +N + + + +A+++ +++ESR
Sbjct: 385 GMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESR-CA 443
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
P V TY +++S + + + A E K V Y +++ G + EA L
Sbjct: 444 PSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFL 503
Query: 487 LTEMKDSGVRISVDEYDKLIQSL 509
L E+ + G+++ +D + L
Sbjct: 504 LEEVVNKGLKLPYRVFDSFLMRL 526
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 134/313 (42%), Gaps = 16/313 (5%)
Query: 184 VHAVCSSSVRE----KEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALE 239
VH + S+ +R K+F ++ E+ I L++ +S G + A +
Sbjct: 86 VHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYS--GMAEHAHK 143
Query: 240 LFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSI-PDEEKVGDILGWL 298
LFD+ C ++++ + A D A +++ + I PD ++ L
Sbjct: 144 LFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKAL 203
Query: 299 CKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL----AYENGTVPLALEMLKDIPGDM 354
C+ + + ++++ + + G P + S N L+ + + G L K++ ++
Sbjct: 204 CRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 355 RKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAV 414
R Y + VR L R K A LI M G P +N +IT Y + + +
Sbjct: 264 RS-----YNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVM 318
Query: 415 EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGY 474
+ ++ +GL PD TY +++ G+++ A ++ EEA K+ + P MY +V
Sbjct: 319 KCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERL 378
Query: 475 CKMEQFDEALKLL 487
+ DEA +L+
Sbjct: 379 MGAGKIDEATQLV 391
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 25/265 (9%)
Query: 299 CKGKKVKEAHAVYKAVVEK-----------------GKYPPMSSVNFLVG-KLAYE-NGT 339
C+ + ++ H +Y A + + K+ + S +F++ L Y +G
Sbjct: 78 CESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGM 137
Query: 340 VPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN-GPPPGNAVFN 398
A ++ ++P + +K + A++ A K + A + ++ G P +N
Sbjct: 138 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
+I + G M + + + LE G +PD+ ++ ++ + +I + K
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 459 HSVLSPVM--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
+ LSP + Y+S VRG + ++F +AL L+ MK G+ V Y+ LI + + +
Sbjct: 258 N--LSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN-NL 314
Query: 517 ETAEKLQAEMKENGLYLKGVTRALI 541
E K EMKE GL VT ++
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCML 339
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 10/263 (3%)
Query: 256 YHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVV 315
Y I+ L F + V Q I E+ V I+ + AH ++ +
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP 149
Query: 316 EKGKYPPMSSVNFLVGKLAYENGT-VPLALEMLKDIPGDMRKHAIKP----YLAVVRALC 370
E + S N L+ AY N + A++ K++P K I P Y +++ALC
Sbjct: 150 ELNCERTVKSFNALLS--AYVNSKKLDEAMKTFKELP---EKLGITPDLVTYNTMIKALC 204
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
R + + ++ NG P FN ++ + + + + L++S+ L P++
Sbjct: 205 RKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIR 264
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
+Y V G + + A +++ K Y++L+ Y +E +K EM
Sbjct: 265 SYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 491 KDSGVRISVDEYDKLIQSLCLKA 513
K+ G+ Y LI LC K
Sbjct: 325 KEKGLTPDTVTYCMLIPLLCKKG 347
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 111/257 (43%), Gaps = 3/257 (1%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWL-CKGKKVKEAHAVYKA 313
Y+ L R+ F +A + + ++D+Q P EK +IL + ++ + VY+
Sbjct: 160 AYNAFAYCLNRNGHFRAADQLPE-LMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEK 218
Query: 314 VVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVK 373
+ + G P + N ++ L +NG LAL + +D D ++ +V+ LC+
Sbjct: 219 MKKFGFKPRVFLYNRIMDALV-KNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAG 277
Query: 374 DVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYA 433
+ +++ M N P + +I G + ++ + + +KPDV Y
Sbjct: 278 RIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYG 337
Query: 434 VIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS 493
+V G G +E ++ E K ++ +Y L+ G+ + A L ++ DS
Sbjct: 338 TLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDS 397
Query: 494 GVRISVDEYDKLIQSLC 510
G + Y+ +I+ LC
Sbjct: 398 GYIADIGIYNAVIKGLC 414
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 144/325 (44%), Gaps = 16/325 (4%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
L+ + G + ELF + + Q + + E Y I+ SA ++ + ++D+
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA 343
I D ++ LC +V +A+ +++ +E+ P +++ ++ +AY +
Sbjct: 399 YIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM--VAY------VV 450
Query: 344 LEMLKDIPGDMRK-----HAIKPYLA-VVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
+ L D + + + + YL + LC ++ A + ++ +V+
Sbjct: 451 MNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVY 510
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N ++ K+G++ +++ + + G +PD +Y++ + + G+++AA E+ +
Sbjct: 511 NILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE 570
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVD-EYDKLIQSLCLKAMDW 516
V S Y SL +G C++ + D + L+ E + ++ +Y + +C K +
Sbjct: 571 MSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVC-KGSNA 629
Query: 517 ETAEKLQAEMKENGLYLKGVTRALI 541
E K+ EM + G+++ V I
Sbjct: 630 EKVMKVVDEMNQEGVFINEVIYCAI 654
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
I+ L K A AVY+ E G ++ LV L + G + LE+L+ + +
Sbjct: 234 IMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC-KAGRIEEMLEILQRMREN 292
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ K + Y A+++ L ++ A+ ++ +M + P + ++ G K G + +
Sbjct: 293 LCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERG 352
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
E+ ++ + + D Y V++ G+ G++ +A + E+ + + +Y+++++G
Sbjct: 353 YELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKG 412
Query: 474 YCKMEQFDEALKLL 487
C + Q D+A KL
Sbjct: 413 LCSVNQVDKAYKLF 426
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESR-GLKPDVYTYAVIVSGYSNGGEMEAARK 450
P FN ++ + + GE + + +E G P+VY+Y V++ Y G M A K
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 451 ILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ EE K V V Y++++ G C + +A +L +M G+ + Y+ L+ C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 511 LKAMDWETAEKLQAEMKENGLYLKGVT 537
KA D ++ + EMK G G+T
Sbjct: 363 -KAGDVDSGLVVYREMKRKGFEADGLT 388
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ I Y ++ LC +V AK+L DM G + ++ GY K G++ + +
Sbjct: 314 YDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVV 373
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGE----MEAARKILEEAKKNHSVLSPVMYHSLVR 472
+ ++ +G + D T +V G + + +EAA + + ++ S Y LV+
Sbjct: 374 YREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVK 433
Query: 473 GYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
C+ + D AL + EM G + S + Y I + D ET+ L EM E+
Sbjct: 434 RLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVG-DEETSALLAIEMAES 489
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G P +N ++ Y G M +A ++ + ++ RG+ D+ Y ++ G + E+ A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
+++ + + + Y LV GYCK D L + EMK G + L++
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 509 LC 510
LC
Sbjct: 396 LC 397
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI-LGWLCKGKKVK-EAH 308
PN T++ +QA + + A V +KM + PD I ++ KG+ V+ E+
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 309 AVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHA-IKPYLAVVR 367
V K V+++ P + +VG E G V L ++ + +MR A + + +++
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCRE-GRVRDGLRFVRRMK-EMRVEANLVVFNSLIN 303
Query: 368 ALCRVKD----------------------VGAAK---QLILDMIANGPPPGNAVFNFVIT 402
V D VG K Q++ M ++ V+
Sbjct: 304 GFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMN 363
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE----EAKKN 458
+S G M +A ++ K + G+KPD + Y+++ GY E + A ++LE E++ N
Sbjct: 364 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPN 423
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
V++ +++ G+C D+A+++ +M GV ++ ++ L+ W+
Sbjct: 424 -----VVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 478
Query: 519 AEKLQ 523
E LQ
Sbjct: 479 EEVLQ 483
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 21/237 (8%)
Query: 336 ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
E G A + K + + ++ Y ++ A+ K G+ ++ ++ +G +
Sbjct: 57 ERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSI 116
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
FN VI +S+ G M AV+ + ++ GL P TY ++ GY G+ E + ++L+
Sbjct: 117 FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLM 176
Query: 456 KKNHSV-LSPVM--YHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLK 512
+ +V + P + ++ LV+ +CK ++ +EA +++ +M++ GVR Y+ + K
Sbjct: 177 LEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 513 A----MDWETAEKLQAEMKEN------GLYLKGVTRA--------LIRAVKEMENEA 551
+ E EK+ + K G+ + G R +R +KEM EA
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 120/277 (43%), Gaps = 6/277 (2%)
Query: 239 ELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWL 298
+ ++ + C + ++ +R ++D A V M +P+ + ++
Sbjct: 94 RIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVN 153
Query: 299 CKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLA--LEMLKDIPGDMRK 356
K V A +++ + ++ S + + G L +LK + G+
Sbjct: 154 FKLNVVNGALEIFEGI----RFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 357 HAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
+ + ++R CR V A Q++ MI +G V++ +++G+ + GE +AV++
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+ G P++ TY ++ G+ + G ++ A +L + + V+ + ++ Y +
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 477 MEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
+ +F+EA K+ T ++ + + ++ SLCL
Sbjct: 330 LGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 128/328 (39%), Gaps = 42/328 (12%)
Query: 228 FSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPD 287
F + G + A++LF+K C PN TY I+ + D A +V K+ PD
Sbjct: 257 FFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPD 316
Query: 288 EEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEML 347
++ + + +EA V+ ++ ++ P + ++ L +G L +
Sbjct: 317 IVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCL-SGKFDLVPRIT 375
Query: 348 KDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKV 407
I D D++ GN + N +SK+
Sbjct: 376 HGIGTD-----------------------------FDLVT-----GNLLSN----CFSKI 397
Query: 408 GEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMY 467
G A++++ ++ + D YTY V +S GG AA K+ + K L +
Sbjct: 398 GYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFH 457
Query: 468 HSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
+++ ++ +++ A+ L + V Y I+ L ++A E A L +MK
Sbjct: 458 SAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGL-VRAKRIEEAYSLCCDMK 516
Query: 528 ENGLYLKGVT-RALIRAV-KEMENEAVE 553
E G+Y T R +I + KE E E V
Sbjct: 517 EGGIYPNRRTYRTIISGLCKEKETEKVR 544
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 102/236 (43%), Gaps = 4/236 (1%)
Query: 275 VSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLA 334
V ++M+ P+ E+ G IL C+ V EA V ++ G ++ + LV
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGF- 257
Query: 335 YENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
+ +G A+++ + + Y ++++ + V A ++ + + G P
Sbjct: 258 FRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDI 317
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
+ N +I Y+++G +A ++ LE R L PD YT+A I+S G+ + +I
Sbjct: 318 VLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG 377
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ +++ + L + K+ ALK+L+ M + Y + +LC
Sbjct: 378 IGTDFDLVTGNL---LSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALC 430
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 126/330 (38%), Gaps = 25/330 (7%)
Query: 161 LRFFRWVWKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTI 220
L FF W K+N+ + +V V +E+YS+ + +
Sbjct: 56 LNFFFWCAKQNNYFHDDRAFDHMVGVV---EKLTREYYSIDRIIERLKISGCEIKPRVFL 112
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM- 279
L IF+ + + A+E++ F VPN + + ++ ++ + A + + +
Sbjct: 113 LLLEIFWRGHIYD--KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIR 170
Query: 280 --------LDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVG 331
+ GD++G V K ++ +G YP ++
Sbjct: 171 FRNFFSFDIALSHFCSRGGRGDLVG----------VKIVLKRMIGEGFYPNRERFGQIL- 219
Query: 332 KLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP 391
+L G V A +++ + ++ + +V R + A L MI G
Sbjct: 220 RLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCS 279
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P + +I G+ +G + +A ++ ++S GL PD+ +++ Y+ G E ARK+
Sbjct: 280 PNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKV 339
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
+K V + S++ C +FD
Sbjct: 340 FTSLEKRKLVPDQYTFASILSSLCLSGKFD 369
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 117/311 (37%), Gaps = 10/311 (3%)
Query: 224 LIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQ 283
LI F LG A + K + P+ + I R F+ A V + +
Sbjct: 288 LIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
Query: 284 SIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP-L 342
+PD+ IL LC K + + + ++ K+ Y + + L
Sbjct: 348 LVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVL 407
Query: 343 ALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
++ KD D + + YL+ ALCR AA ++ +I + +I
Sbjct: 408 SIMSYKDFALDCYTYTV--YLS---ALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIID 462
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVL 462
++G+ AV + K DV +Y V + G +E A + + K+
Sbjct: 463 SLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYP 522
Query: 463 SPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW----ET 518
+ Y +++ G CK ++ ++ K+L E GV + + ++ L D+
Sbjct: 523 NRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSV 582
Query: 519 AEKLQAEMKEN 529
EK ++E EN
Sbjct: 583 FEKWKSEFTEN 593
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 131/306 (42%), Gaps = 14/306 (4%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+ + Y I + + D+ V +M ++ + G ++ + +V +A Y
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVR 367
+ K P N L+ ++G V A ++L ++ + H I P A+++
Sbjct: 561 GILRSKNVKPDRVVFNALISACG-QSGAVDRAFDVLAEMKAET--HPIDPDHISIGALMK 617
Query: 368 ALCRVKDVGAAK---QLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRG 424
A C V AK Q+I G P V+ + SK G+ A + K ++ +
Sbjct: 618 ACCNAGQVERAKEVYQMIHKYGIRGTP---EVYTIAVNSCSKSGDWDFACSIYKDMKEKD 674
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
+ PD ++ ++ + ++ A IL++AK L + Y SL+ C + + +AL
Sbjct: 675 VTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKAL 734
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALIRAV 544
+L ++K +R ++ + LI +LC + E L E+K GL +T +++
Sbjct: 735 ELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLD-EIKTLGLKPNTITYSMLMLA 793
Query: 545 KEMENE 550
E +++
Sbjct: 794 SERKDD 799
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 9/222 (4%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
KL+ +++ G A ++FD N T+ I A R + + + + + M+
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD+ IL V+ ++ V++ G + N ++ A + G +
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA-KCGELD 233
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
A + + MR+ + + +V+ A C+ A +L+ +M G PG +N +I
Sbjct: 234 FATKFFRR----MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGG 443
GY+++G+ A+++M+ +E+ G+ DV+T+ ++SG + G
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 113/251 (45%), Gaps = 6/251 (2%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI ++QLG AA++L K E F + T+ I L + + A + +KM
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
A +P+ + + K + + V+ V+ G + LVG + +
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID-----DVLVGNSLVDMYSKC 400
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
LE + + ++ + + +++ C+ G A +L M P +N +I
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 402 TGYSKVGEMGQAVEMMKLLESRG-LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+GY K G+ G+A+++ + +E G ++ + T+ +I++GY G+ + A ++ + + +
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 461 VLSPVMYHSLV 471
+ + V SL+
Sbjct: 521 MPNSVTILSLL 531
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 14/245 (5%)
Query: 293 DILGW------LCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN-GTVPLALE 345
D++ W C+ K +EA + K + ++G P + + N L+G Y G A++
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG--GYNQLGKCDAAMD 303
Query: 346 MLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYS 405
+++ + + + A++ L A + M G P ++ S
Sbjct: 304 LMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 363
Query: 406 KVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV 465
+ + Q E+ + G DV +V YS G++E ARK+ + K N V +
Sbjct: 364 CLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK-NKDVYT-- 420
Query: 466 MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAE 525
++S++ GYC+ +A +L T M+D+ +R ++ ++ +I +K D A L
Sbjct: 421 -WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY-IKNGDEGEAMDLFQR 478
Query: 526 MKENG 530
M+++G
Sbjct: 479 MEKDG 483
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 270 DSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFL 329
DSA M+ +P + + LC+ K Y+ + KG + + S + +
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 330 VGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDM 385
+ L + G V + L++ M+K + P Y A++ A C+ + + AK+L +M
Sbjct: 404 ISFLC-KAGRVRESYTALQE----MKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 386 IANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEM 445
G +N +I S+ GE +++ + + RG++PD Y ++ G ++
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 446 EAARKILEEA-KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
EAA ++ + +++H ++ + V C EA +LL E
Sbjct: 519 EAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 374 DVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYA 433
D +A + ++ M++ G P + + + + ++ +LL S+G ++ +Y+
Sbjct: 342 DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 434 VIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDS 493
+++S G + + L+E KK +Y++L+ CK E A KL EM
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 494 GVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
G ++++ Y+ LI+ L + + E + +L +M E G+
Sbjct: 462 GCKMNLTTYNVLIRKLSEEG-EAEESLRLFDKMLERGI 498
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 1/172 (0%)
Query: 359 IKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMK 418
++ Y ++R LC ++ ++ +M P A F +I G+ K + + ++M+
Sbjct: 182 LETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMR 241
Query: 419 LLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
+++ G+ V TY +++ + A+ +++ + V Y L+ G+C E
Sbjct: 242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEE 301
Query: 479 QFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
DEA+ L M +G + + Y LI LC K D+ETA L E E
Sbjct: 302 NLDEAMNLFEVMVCNGYKPDSECYFTLIHCLC-KGGDFETALILCRESMEKN 352
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 102/228 (44%), Gaps = 6/228 (2%)
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN--GTVPLA 343
PD E ++ LC+ ++++ + K P +S ++ E V
Sbjct: 180 PDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKV 239
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
+ M+ + + + Y +++ LC+ K AK LI +++ P + ++ +I G
Sbjct: 240 MRMMDEFGVHV---GVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 404 YSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLS 463
+ + +A+ + +++ G KPD Y ++ GG+ E A + E+ + + V S
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+ LV G + DEA +L+ +K+ R +VD ++++ +L L
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIAVVKEKFTR-NVDLWNEVEAALPL 403
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 17/246 (6%)
Query: 257 HFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVE 316
H +Q+L R S D+AS ++++ + + + P I+ + + K+ E+ ++++ +
Sbjct: 149 HNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFK 208
Query: 317 KGK-YPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCR 371
+ P + S N ++ E G V ALE+ + I + P Y + + L +
Sbjct: 209 QSNIVPNVVSYNQIINAHCDE-GNVDEALEVYRHI---LANAPFAPSSVTYRHLTKGLVQ 264
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
+G A L+ +M++ G + V+N +I GY +G+ +AVE L+S+ D
Sbjct: 265 AGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIV 324
Query: 432 YAVIVSGYSNGGE----MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
A + + G ME+ R +L++ + H P + L+ + K + DEA L
Sbjct: 325 NATFMEYWFEKGNDKEAMESYRSLLDKKFRMH----PPTGNVLLEVFLKFGKKDEAWALF 380
Query: 488 TEMKDS 493
EM D+
Sbjct: 381 NEMLDN 386
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 102/245 (41%), Gaps = 19/245 (7%)
Query: 323 MSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLI 382
MS V + K N V LEM K A+ +++ AL + + A ++
Sbjct: 206 MSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMN---SLMDALVKENSIEHAHEVF 262
Query: 383 LDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
L + P FN +I G+ K + A MM L++ PDV TY V Y
Sbjct: 263 LKLFDTIKPDART-FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE 321
Query: 443 GEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEY 502
G+ ++LEE ++N + V Y ++ K +Q EAL + +MK+ G Y
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 503 DKLIQSLCLKAMDWETAEKLQAEMKENG------LYLKGVTRAL--------IRAVKEME 548
LI L K ++ A ++ +M G +Y ++ AL +R +K ME
Sbjct: 382 SSLIHILS-KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Query: 549 NEAVE 553
+E E
Sbjct: 441 DEEGE 445
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 16/277 (5%)
Query: 238 LELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGW 297
L+LFD + P+A T++ I + FD A ++ M + PD +
Sbjct: 263 LKLFDTIK-----PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEA 317
Query: 298 LCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKH 357
CK + + + + + E G P + + ++ L ++ V AL + + + D
Sbjct: 318 YCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLG-KSKQVAEALGVYEKMKEDGCVP 376
Query: 358 AIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
K Y +++ L + A ++ DM G V+N +I+ A+ ++
Sbjct: 377 DAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL 436
Query: 418 KLLESR---GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGY 474
K +E P+V TYA ++ + +M+ +L KN + Y L+RG
Sbjct: 437 KRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGL 496
Query: 475 C---KMEQ----FDEALKLLTEMKDSGVRISVDEYDK 504
C K+E+ F+EA++ +DS ++ VDE +K
Sbjct: 497 CMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 9/334 (2%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
T LN L+ Q+ A ++F + + C P+ ++Y ++ + A+ +
Sbjct: 153 TALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYS 212
Query: 279 ML--DAQSIPDEEKV--GDILGWLCKGKKVKEAHAVYKAVVEKG-KYPPMSSVNFLVGKL 333
M +Q E+ V +L LC +V +A + ++ KG K P + G
Sbjct: 213 MFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW 272
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
+ + +L + + Y A+ L + ++++L M + G P
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 394 NAVFNFVITGYSKVGEMGQAVEMM--KLLESRGLKPDVYTYAVIVSGYSNGGE-MEAARK 450
++ + + G++ +AV ++ ++++ L P V Y V++ G + G+ MEA
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 451 ILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ + +K+ V + Y +LV G C+ QF EA +++ EM V+ Y +I+ LC
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Query: 511 LKAMDWETAEKLQAEMKENGLYLKGVTRALIRAV 544
+E L+ + ++ + V +AL +V
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 125/301 (41%), Gaps = 11/301 (3%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
++ +I FS+ G + A+ LF F CV + ++ +Q + + S ++A + +K
Sbjct: 82 SVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK 141
Query: 279 MLDAQSIPDEEKVGDIL-GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
+ ++L LC+ + A V++ + +G YP S L+ E
Sbjct: 142 YCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG 201
Query: 338 G---TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
L M I I Y ++ ALC +V A +++ ++ G
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLES----RGLKPDVYTYAVIVSGYSNGGEMEAARK 450
++ + G+ + G +E +K L + RG P + +Y+ + + G++ +
Sbjct: 262 RCYHHIEAGHWESSSEG--IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEE 319
Query: 451 ILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT-EMKDSGVRISVDEYDKLIQSL 509
+L + +P +Y + V+ C+ + EA+ ++ EM +V Y+ LI+ L
Sbjct: 320 VLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGL 379
Query: 510 C 510
C
Sbjct: 380 C 380
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 143/334 (42%), Gaps = 9/334 (2%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
T LN L+ Q+ A ++F + + C P+ ++Y ++ + A+ +
Sbjct: 153 TALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYS 212
Query: 279 ML--DAQSIPDEEKV--GDILGWLCKGKKVKEAHAVYKAVVEKG-KYPPMSSVNFLVGKL 333
M +Q E+ V +L LC +V +A + ++ KG K P + G
Sbjct: 213 MFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW 272
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
+ + +L + + Y A+ L + ++++L M + G P
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 394 NAVFNFVITGYSKVGEMGQAVEMM--KLLESRGLKPDVYTYAVIVSGYSNGGE-MEAARK 450
++ + + G++ +AV ++ ++++ L P V Y V++ G + G+ MEA
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGY 391
Query: 451 ILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ + +K+ V + Y +LV G C+ QF EA +++ EM V+ Y +I+ LC
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC 451
Query: 511 LKAMDWETAEKLQAEMKENGLYLKGVTRALIRAV 544
+E L+ + ++ + V +AL +V
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 125/301 (41%), Gaps = 11/301 (3%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
++ +I FS+ G + A+ LF F CV + ++ +Q + + S ++A + +K
Sbjct: 82 SVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK 141
Query: 279 MLDAQSIPDEEKVGDIL-GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
+ ++L LC+ + A V++ + +G YP S L+ E
Sbjct: 142 YCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEG 201
Query: 338 G---TVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
L M I I Y ++ ALC +V A +++ ++ G
Sbjct: 202 KLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPK 261
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLES----RGLKPDVYTYAVIVSGYSNGGEMEAARK 450
++ + G+ + G +E +K L + RG P + +Y+ + + G++ +
Sbjct: 262 RCYHHIEAGHWESSSEG--IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEE 319
Query: 451 ILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT-EMKDSGVRISVDEYDKLIQSL 509
+L + +P +Y + V+ C+ + EA+ ++ EM +V Y+ LI+ L
Sbjct: 320 VLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGL 379
Query: 510 C 510
C
Sbjct: 380 C 380
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAV 314
TY I R +L++ A ++M +PDE IL K KV+E ++Y+
Sbjct: 223 TYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERA 282
Query: 315 VEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALC 370
V G P + + L GK+ E G + ++ + +M+ +KP Y ++ A+
Sbjct: 283 VATGWKPDAIAFSVL-GKMFGEAGDY----DGIRYVLQEMKSMDVKPNVVVYNTLLEAMG 337
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
R G A+ L +M+ G P ++ Y K A+++ + ++++ D
Sbjct: 338 RAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFI 397
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKN-HSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
Y +++ ++ G E A ++ + K++ Y +++ Y + ++A++L E
Sbjct: 398 LYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEE 457
Query: 490 MKDSGVRISVDEYDKLIQSL 509
M +GV+++V L+Q L
Sbjct: 458 MLKAGVQVNVMGCTCLVQCL 477
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 379 KQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSG 438
+++ L+M+ +G N ++ +IT + +A+E + + GL PD TY+ I+
Sbjct: 206 EEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV 265
Query: 439 YSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRIS 498
YS G++E + E A + + L + + + +D +L EMK V+ +
Sbjct: 266 YSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPN 325
Query: 499 VDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
V Y+ L++++ +A A L EM E GL
Sbjct: 326 VVVYNTLLEAMG-RAGKPGLARSLFNEMLEAGL 357
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
+N ++ + LGN A + +C P+ +Y I AL + A + + M
Sbjct: 250 MNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMW 309
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
D + PD + +++ LC K++ EA V++ + EKG P + + N L+ L T
Sbjct: 310 DTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE 369
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIA-NGPPPGNAVFNF 399
+ E+++++ +++ + P L + ++L+ +A N + ++N
Sbjct: 370 KV-WELVEEM--ELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
+ Y + + + E+ +E GL PD TY + + G G++ A +E
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 460 SVLSP 464
V P
Sbjct: 487 MVPEP 491
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 8/248 (3%)
Query: 296 GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
GW G V EA +K ++ P + S ++ L + G + A+E+ + + R
Sbjct: 256 GWCVLGN-VHEAKRFWKDIIASKCRPDVVSYGTMINALT-KKGKLGKAMELYRAMWDTRR 313
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
+K V+ ALC K + A ++ ++ GP P +N ++ K+ + E
Sbjct: 314 NPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWE 373
Query: 416 MMKLLESRG--LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
+++ +E +G P+ T++ ++ +++ +LE KN ++ +Y+ + R
Sbjct: 374 LVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLMFRL 430
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYL 533
Y + ++ ++ ++ +EM+ SG+ Y I L K E Q EM G+
Sbjct: 431 YVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ-EMMSKGMVP 489
Query: 534 KGVTRALI 541
+ T L+
Sbjct: 490 EPRTEMLL 497
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 105/240 (43%), Gaps = 6/240 (2%)
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
GD+ L K++KE +VY + P + + N L+ L G AL + ++
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFG----PDICTYNSLIHVLCL-FGKAKDALIVWDELK 316
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
+ Y +++ C+ + A ++ +M NG P V+N ++ G K ++
Sbjct: 317 VSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVT 376
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
+A ++ + + G++ +TY +++ G G EA + + KK + + + +
Sbjct: 377 EACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVG 436
Query: 472 RGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
C+ + + A+KL+ EM+ G + + L+ K W+ EKL ++E L
Sbjct: 437 LQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF-HKQGRWDWKEKLMKHIREGNL 495
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+N +++ + K G A ++ + D+ TY VI+ G G + A +L+
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
K L VMY++L+ K + DEA +L MK +G+ V Y+ +I+ + KA
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE-VNSKAGK 750
Query: 516 WETAEKLQAEMKENGLYLKGVTRALIRAV-KEME 548
+ A K M + G VT ++ + KEME
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEME 784
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 156/422 (36%), Gaps = 43/422 (10%)
Query: 130 SLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWVWKENSSNVTTPVVES-LVHAVC 188
SLDA + + + V+ LRRNS L FFRW + + S + VC
Sbjct: 47 SLDANSIPISEPVVLQILRRNSIDP---SKKLDFFRWCYSLRPGYKHSATAYSQIFRTVC 103
Query: 189 SSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIF-YFSQLGNGKAALELFDKFEFF 247
+ + L E+ + K++ + G ++AL + D E
Sbjct: 104 RTGL-------LGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEEL 156
Query: 248 QCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEA 307
N Y + AL + A S+ K+L+A ++ G
Sbjct: 157 GDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG--------------- 201
Query: 308 HAVYKAVVEKGKYPPMSSVN-FLVG-KLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAV 365
V+ P +VN LVG + A E LK + K Y
Sbjct: 202 -----RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMK--RFKFDTWSYNIC 254
Query: 366 VRALCRVKDVGAAKQLILDM------IANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
+ D+ AA L +M + P +N +I G+ A+ +
Sbjct: 255 IHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDE 314
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
L+ G +PD TY +++ G M+ A +I E + N V ++Y+ L+ G K +
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRA 539
EA +L +M GVR S Y+ LI L + E L ++K+ G ++ +T +
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGL-FRNGRAEAGFTLFCDLKKKGQFVDAITFS 433
Query: 540 LI 541
++
Sbjct: 434 IV 435
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 10/243 (4%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N LI G K AL ++D+ + P+ TY IQ + D A + +M
Sbjct: 293 NSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQY 352
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+PD +L K +KV EA +++ +V++G + N L+ L + NG
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGL-FRNGRAE 411
Query: 342 LALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVI 401
+ D+ + + V LCR + A +L+ +M G + ++
Sbjct: 412 AGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Query: 402 TGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV 461
G+ K G ++MK + L P+V + N G +EA+ K + K+++
Sbjct: 472 IGFHKQGRWDWKEKLMKHIREGNLVPNVLRW--------NAG-VEASLKRPQSKDKDYTP 522
Query: 462 LSP 464
+ P
Sbjct: 523 MFP 525
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 63/130 (48%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y + A CR++ A+ L +M+ G ++ ++ Y K + AV +M ++
Sbjct: 391 YAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMK 450
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
RG KP+++ Y ++ + ++ A KI +E K+ + V Y S++ Y + ++ +
Sbjct: 451 QRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELE 510
Query: 482 EALKLLTEMK 491
++L E +
Sbjct: 511 RCVELYQEFR 520
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 2/234 (0%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
+ L K + EA V + + +KG P S + ++ + E V + ++ K+ G
Sbjct: 254 VCSSLAKSGRAFEALEVLEEMKDKG-IPESSELYSMLIRAFAEAREVVITEKLFKEAGGK 312
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ L VV R ++ +++ M + + ++ G+SK +A
Sbjct: 313 KLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEA 372
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
V++ + + TYA+ ++ Y + A + +E K V Y +++
Sbjct: 373 VKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDM 432
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
Y K + +A++L+ +MK G + ++ Y+ LI + +AMD AEK+ EMK
Sbjct: 433 YGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLID-MHGRAMDLRRAEKIWKEMK 485
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 1/206 (0%)
Query: 325 SVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILD 384
S+ +V ++G ALE+L+++ + + Y ++RA ++V ++L +
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
+ V+ Y + G M +E++ + LK IV+G+S
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 445 MEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDK 504
A K+ E A K V Y + YC++E++++A L EM G V Y
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 505 LIQSLCLKAMDWETAEKLQAEMKENG 530
I + K A +L A+MK+ G
Sbjct: 429 -IMDMYGKTRRLSDAVRLMAKMKQRG 453
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 54/284 (19%)
Query: 273 SSVSQKMLD--AQSIPDEEKVGDIL--GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNF 328
+S+++KM+ A I +E + D+L GW C +K+ EA + MS F
Sbjct: 227 ASIAEKMVKNTANEIFPDENICDLLISGW-CIAEKLDEATRLAGE---------MSRGGF 276
Query: 329 LVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDV----GAAKQLILD 384
+G AY M+ D V LCR KD ++++L+
Sbjct: 277 EIGTKAYN---------MMLD---------------CVCKLCRKKDPFKLQPEVEKVLLE 312
Query: 385 MIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGE 444
M G P FN +I K+ +A+ + + G +PD TY V++
Sbjct: 313 MEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAAR 372
Query: 445 MEAARKILEEAKKN--HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEY 502
+ +++++ K +L+ Y+ ++ C +E+ + A+ + MK +G + + Y
Sbjct: 373 IGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTY 432
Query: 503 DKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVTRALIRAVKE 546
D L+ +C A + T + NGLY + + + + KE
Sbjct: 433 DLLMGKMC--ANNQLT--------RANGLYKEAAKKGIAVSPKE 466
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 16/228 (7%)
Query: 291 VGDILGWLCK----GKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM 346
G+I +L K K ++ + + ++E P +N ++ L G + A E+
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 347 LKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVIT 402
K R H + P Y +++A C D+ A QL M+ P + +I
Sbjct: 178 FKS----SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 403 GYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVL 462
G+ + G++ A+E++ + ++G PD ++ G + G + +K LEE
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Query: 463 SPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
+ + LV+G+C + +EA ++ + +G + D ++ +I +C
Sbjct: 290 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 120/307 (39%), Gaps = 52/307 (16%)
Query: 230 QLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEE 289
++G + A+ +F + F C + T I AL A V D S +
Sbjct: 150 KVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELS 209
Query: 290 KVGDIL-GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN------GTVPL 342
+L GW + + VKEA V + + G P + N L+ L N G VP
Sbjct: 210 VYRSLLFGWSVQ-RNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPE 268
Query: 343 ALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFN 398
AL +I +MR + I+P Y ++ L R + V + Q++ M +G P +
Sbjct: 269 AL----NIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYY 324
Query: 399 FVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN 458
FV+ G G+ +++ + RG +P+ RK
Sbjct: 325 FVVRVLYLTGRFGKGNQIVDEMIERGFRPE--------------------RKF------- 357
Query: 459 HSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWET 518
Y+ L+ C +E+ + AL+L +MK S V YD LI LC K ++E
Sbjct: 358 --------YYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLC-KGGNFEK 408
Query: 519 AEKLQAE 525
+L E
Sbjct: 409 GRELWEE 415
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%)
Query: 360 KPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
K + V+R L KD A + L+ D+ F+ V KVG+ A+ + K+
Sbjct: 104 KEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKI 163
Query: 420 LESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQ 479
L+ D +T I+S + G ++ A ++ K S +Y SL+ G+
Sbjct: 164 LDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRN 223
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
EA +++ +MK +G+ + ++ L+ LC
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLC 254
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 4/223 (1%)
Query: 294 ILGWLCKG--KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
+L C+ + H V +V G P + + V L E G V A +++K++
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC-ETGRVDEAKDLMKELT 186
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIAN-GPPPGNAVFNFVITGYSKVGEM 410
Y +++ LC+ KD+ + + +M + P F +I +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSL 470
+A+ ++ L + G KPD + Y I+ G+ + A + ++ K+ + Y++L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
+ G K + +EA L M D+G Y L+ +C K
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 13/128 (10%)
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAV-FNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
LC+V + A++L +G P + V + VITGY K+G+M +A E+ ++SR
Sbjct: 56 LCKVGKIAEARKLF-----DGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---K 107
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
+V T+ +VSGY ++ A + +E + + V +++++ GY + + D+AL+L
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN----VVSWNTMIDGYAQSGRIDKALELF 163
Query: 488 TEMKDSGV 495
EM + +
Sbjct: 164 DEMPERNI 171
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 104/225 (46%), Gaps = 45/225 (20%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
++G LCK K+ EA ++ + E+ ++ + + G + G + A E+ + D
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER---DVVTWTHVITGYIKL--GDMREARELFDRV--D 104
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV-FNFVITGYSKVGEMGQ 412
RK+ + + A+V R K + A+ L +M P N V +N +I GY++ G + +
Sbjct: 105 SRKNVV-TWTAMVSGYLRSKQLSIAEMLFQEM-----PERNVVSWNTMIDGYAQSGRIDK 158
Query: 413 AVE---------------MMKLLESRGL------------KPDVYTYAVIVSGYSNGGEM 445
A+E M+K L RG + DV ++ +V G + G++
Sbjct: 159 ALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKV 218
Query: 446 EAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
+ AR++ + +++S +++++ GY + + DEA +L M
Sbjct: 219 DEARRLFD-CMPERNIIS---WNAMITGYAQNNRIDEADQLFQVM 259
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 413 AVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVR 472
A+ + ++ G+ P V Y ++ GY GE++ A+++ E + + Y+S++R
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 473 GYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY 532
G C +F EA LL EM+ G + Y L+ L KA A K+ EM + G Y
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYL-RKAGKLSEARKVIKEMVKKGHY 826
Query: 533 LKGVTRAL 540
+ V++ +
Sbjct: 827 VHLVSKMM 834
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 354 MRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
M++ I P Y ++ ++ AK++ +M G P +N +I G GE
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE-AKKNHSV 461
+A ++K +ESRG P+ Y+ +V G++ ARK+++E KK H V
Sbjct: 775 FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYV 827
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 389 GPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAA 448
G P + +I GY GE+ +A EM + + +G P+V+TY ++ G GE A
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 778
Query: 449 RKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
+L+E + + V+Y +LV K + EA K++ EM G
Sbjct: 779 CWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 342 LALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVF 397
L ++++ I M ++KP + +++R R+KD A ++ ++ P +++F
Sbjct: 422 LEFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMF 481
Query: 398 NFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK 457
N ++ GY + + A+ ++K ++ G+KPD T+ ++ +N + +A K EE K+
Sbjct: 482 NCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLI---NNCTQEDAITKYYEEMKQ 538
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
+ +Y SL+ Y +F++A ++L +
Sbjct: 539 AGVQATKRIYMSLIDAYAASGKFEKAKQVLVD 570
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/460 (19%), Positives = 191/460 (41%), Gaps = 41/460 (8%)
Query: 106 IDEGKLENVVSLLQREDA--DGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRF 163
+ + L + +LL+ D SLES+LD + + V R S L+ ++
Sbjct: 65 VSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSV--- 121
Query: 164 FRWVWKENSSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXX-XXXXXXTILN 222
F+W + ++ + +S+V+++C + +EF W L
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLC----KAREFEIAWSLVFDRVRSDEGSNLVSADTFI 177
Query: 223 KLIFYFSQLGNGKAALELFDKFEFFQCVPNAET----YHFTIQALYRHSLFDSASSVSQK 278
LI +++ G + A+ F+ ++ V + T + AL + AS ++
Sbjct: 178 VLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLER 237
Query: 279 M---LDAQSIPDEEKVGDIL--GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL 333
+ +D+ +P ++ +IL GW + +K+K+A +++ + P + + L+
Sbjct: 238 IGGTMDSNWVPSV-RIFNILLNGWF-RSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGY 295
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
V +A+E+L+++ + + ++ L + A ++ P
Sbjct: 296 CRMR-RVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPT 354
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI-- 451
+N ++ + K G++ A +++K++ +RG+ P TY +S + E +
Sbjct: 355 IVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYF 414
Query: 452 -LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
L EA + L+ YH +++ C+ + A+++ EMK+ G+ + LI LC
Sbjct: 415 KLIEAGHSPDRLT---YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLC 471
Query: 511 LKAMDWETAEK-------------LQAEMKENGLYLKGVT 537
M E E+ + +M +NGL KG++
Sbjct: 472 RLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMS 511
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 122/276 (44%), Gaps = 17/276 (6%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ +++ G AL LF + PN T++ I +L R+ D A + +M
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 282 AQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVP 341
+ IP+ ++ + + +EA + + E G P S+ + A+
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH-----L 559
Query: 342 LALEMLKDIPGDMRKHAIKPYL-----AVVRALCRVKDVGAAKQLILDMIANGPPPGNAV 396
+L + + I G + ++ L ++V + D+ A+++ + + P NA
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNA- 618
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+I+ Y+ G + +A+ + + LE GLKPD T ++S ++ G++ A +I +
Sbjct: 619 ---MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 457 KNHSVLSPVMYHS--LVRGYCKMEQFDEALKLLTEM 490
S + P + H +V + ++AL+L+ EM
Sbjct: 676 SKRS-MKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+N +I + G++ A E+ + + + G+ + TY ++S Y G +++ A +I A+
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
++ L +Y +++ Y K + EAL L +EM+ G++ Y+ +++ +
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHH 896
Query: 517 ETAEKLQAEMKENG 530
E E LQA M+ NG
Sbjct: 897 EVDELLQA-MERNG 909
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 120/282 (42%), Gaps = 2/282 (0%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
P I A R + A + + + P + ++ L K +EA
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRAL 369
+ + +EK N L+ K E G + A E+ + + +I+ Y ++
Sbjct: 761 ISRTCLEKNIELDTVGYNTLI-KAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDV 429
R + A ++ + +G ++ +I Y K G+M +A+ + ++ +G+KP
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGT 879
Query: 430 YTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
+Y ++V + ++L+ ++N Y +L++ Y + QF EA K +T
Sbjct: 880 PSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+K+ G+ +S + L+ +L +KA E AE+ +M E G+
Sbjct: 940 VKEKGIPLSHSHFSSLLSAL-VKAGMMEEAERTYCKMSEAGI 980
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 376 GAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVI 435
G L L+M+ G PP + V++ Y+K G +A++ ++S G P+ TY+ +
Sbjct: 275 GKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSV 334
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
+S G+ E A + E+ + V S +++ Y K E + +AL L +M+ +
Sbjct: 335 ISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERN-- 392
Query: 496 RISVDE 501
+I DE
Sbjct: 393 KIPADE 398
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
+V+NF+++ K G+ +++ + G+ P+ +TY ++VS Y+ G E A K
Sbjct: 258 TSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFG 317
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKA 513
E K V V Y S++ K +++A+ L +M+ G+ + + + SL K
Sbjct: 318 EMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGI-VPSNYTCATMLSLYYKT 376
Query: 514 MDWETAEKLQAEMKENGLYLKGVTRALI 541
++ A L A+M+ N + V R LI
Sbjct: 377 ENYPKALSLFADMERNKIPADEVIRGLI 404
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 137/302 (45%), Gaps = 41/302 (13%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQ-ALYRHSL-FDSASSVSQ 277
I LI ++S G + A ++FD+ +P + +T + YR L DSA+S++
Sbjct: 906 IQTTLIDFYSATGRIREARKVFDE------MPERDDIAWTTMVSAYRRVLDMDSANSLAN 959
Query: 278 KMLD---------------------AQSIPDEEKVGDILGW--LCKG----KKVKEAHAV 310
+M + A+S+ ++ V DI+ W + KG K+ +EA AV
Sbjct: 960 QMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAV 1019
Query: 311 YKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALC 370
+ ++E+G P +++ ++ A+ LE+ K++ ++ + + AL
Sbjct: 1020 FYKMMEEGIIPDEVTMSTVISACAHLG-----VLEIGKEVHMYTLQNGFVLDVYIGSALV 1074
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
+ + + L + N P +N +I G + G +A++M +E +KP+
Sbjct: 1075 DMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV 1134
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPV-MYHSLVRGYCKMEQFDEALKLLTE 489
T+ + + ++ G ++ R+I ++S++S V Y +V + K EAL+L+
Sbjct: 1135 TFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGN 1194
Query: 490 MK 491
M+
Sbjct: 1195 ME 1196
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y ++ + + A + M+ G P FN +I Y G++G+ +MK ++
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
PD TY +++S ++ ++E A +E K + PV Y +L+ + +
Sbjct: 361 LH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 482 EALKLLTEMKDSGVRISVDEYDK 504
EA L+ EM D V I DEY +
Sbjct: 420 EAEGLIAEMDDDNVEI--DEYTQ 440
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 13/267 (4%)
Query: 237 ALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILG 296
A ELF+ + P+ TY+ +Q L + +KM + + D ++
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 297 WLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLAL---EMLKD--IP 351
K ++ A VYK +VE P + L+ A + G V A+ E +K+ IP
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA-DTGNVQQAMSYVEAMKEAGIP 642
Query: 352 GD--MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
G+ + IK Y V + + A + +L P N +I YS+
Sbjct: 643 GNSVIYNSLIKLYTKV----GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSM 698
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+ +A + ++ RG + + +T+A+++ Y G E A +I ++ ++ + P+ Y+S
Sbjct: 699 VRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNS 757
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVR 496
++ + +F EA++ EM SG++
Sbjct: 758 VLGLFALDGRFKEAVETFKEMVSSGIQ 784
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 396 VFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEA 455
+N +I Y K G++ +A E K + G+ P T+ ++ Y N G++ +++
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 456 KKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMD 515
K H Y+ L+ + K + A EMKD G++ Y L+ + ++ M
Sbjct: 360 KL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM- 417
Query: 516 WETAEKLQAEMKENGLYLKGVTR-ALIRAVKEME 548
E AE L AEM ++ + + T+ AL R E E
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAE 451
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 16/265 (6%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETY-----HFTI--QALYRHSLFDS 271
++ N LI+ + AALE+++ PN +Y HF I A + ++
Sbjct: 382 SVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRW 441
Query: 272 ASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVG 331
+ KM D P +L K + A ++KA+V+ G+ P + S L+
Sbjct: 442 GVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLS 501
Query: 332 KLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIA 387
A E G L E + + M K I+P Y + L + L+ +M +
Sbjct: 502 --ALEKGK--LYDEAFR-VWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMAS 556
Query: 388 NGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEA 447
G P FN VI+G ++ G G A E ++S ++P+ TY +++ +N +
Sbjct: 557 KGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRL 616
Query: 448 ARKILEEAKKNHSVLSPVMYHSLVR 472
A ++ +A+ LS Y ++V+
Sbjct: 617 AYELHVKAQNEGLKLSSKPYDAVVK 641
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 371 RVKDVGAAKQLILDMIANGPPPGN-------AVFNFVITGYSKVGEMGQAVEMMKLLESR 423
+ K AA ++ D++ GP P N + FN +++ SK G V ++ +E +
Sbjct: 393 KAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDK 452
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
GLKP + ++ S E AA +I + N + + Y +L+ K + +DEA
Sbjct: 453 GLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEA 512
Query: 484 LKLLTEMKDSGVRISVDEYDKLIQSL 509
++ M G+ ++ Y + L
Sbjct: 513 FRVWNHMIKVGIEPNLYAYTTMASVL 538
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 125/266 (46%), Gaps = 36/266 (13%)
Query: 246 FFQCVP--NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKK 303
F+ +P NA ++ I ++ DSA + +KM + D + ++ L K ++
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM----PVKDSSPLCALVAGLIKNER 213
Query: 304 VKEAHAV---YKAVVEKGKYPPMSSVNFLVGKLAY-ENGTVPLALEMLKDIP-------- 351
+ EA V Y ++V G+ + + N L+ + Y + G V A + IP
Sbjct: 214 LSEAAWVLGQYGSLV-SGREDLVYAYNTLI--VGYGQRGQVEAARCLFDQIPDLCGDDHG 270
Query: 352 GDMRKHAIK---PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVG 408
G+ R+ K + ++++A +V DV +A+ L+ D + + +N +I GY V
Sbjct: 271 GEFRERFCKNVVSWNSMIKAYLKVGDVVSAR-LLFDQMKD---RDTISWNTMIDGYVHVS 326
Query: 409 EMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYH 468
M A + + +R D +++ ++VSGY++ G +E AR E+ + H+ V ++
Sbjct: 327 RMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHT----VSWN 378
Query: 469 SLVRGYCKMEQFDEALKLLTEMKDSG 494
S++ Y K + + EA+ L M G
Sbjct: 379 SIIAAYEKNKDYKEAVDLFIRMNIEG 404
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 22/282 (7%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYH--FTIQALYRHSLFDSASSVSQKM 279
N LI + Q G +AA LFD+ + + F + +S+ + V +
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD-V 297
Query: 280 LDAQSIPDEEKVGDILGW--LCKG----KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL 333
+ A+ + D+ K D + W + G ++++A A++ + + + S N +V
Sbjct: 298 VSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SWNMMVSGY 353
Query: 334 AYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPG 393
A G V LA + P KH + + +++ A + KD A L + M G P
Sbjct: 354 A-SVGNVELARHYFEKTP---EKHTVS-WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 394 NAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILE 453
+++ + + + ++M +++ + + PDV + +++ YS GE+ +R+I +
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIV-VKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 454 EAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
E K V++ +++++ GY EAL L MK +G+
Sbjct: 468 EMKLKREVIT---WNAMIGGYAFHGNASEALNLFGSMKSNGI 506
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 302 KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIK- 360
K + E ++++ ++G +S++ LV + + E GT +L K++ + +
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTITKLVAR-SCELGTRE-SLSFAKEVFENSESYGTCF 100
Query: 361 PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLL 420
Y +++R A L L M+ +G P F F ++ +K G +++ L+
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 421 ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQF 480
G D++ +V Y+ GE+++ARK+ +E + + V + S++ GY + +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN----VVSWTSMICGYARRDFA 216
Query: 481 DEALKLLTEM-KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+A+ L M +D V + +I S C K D ET EK+ A ++ +G+
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVI-SACAKLEDLETGEKVYAFIRNSGI 267
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 302 KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIK- 360
K + E ++++ ++G +S++ LV + + E GT +L K++ + +
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTITKLVAR-SCELGTRE-SLSFAKEVFENSESYGTCF 100
Query: 361 PYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLL 420
Y +++R A L L M+ +G P F F ++ +K G +++ L+
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 421 ESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQF 480
G D++ +V Y+ GE+++ARK+ +E + + V + S++ GY + +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN----VVSWTSMICGYARRDFA 216
Query: 481 DEALKLLTEM-KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+A+ L M +D V + +I S C K D ET EK+ A ++ +G+
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVI-SACAKLEDLETGEKVYAFIRNSGI 267
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 31/255 (12%)
Query: 244 FEFFQCVPNA--ETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKG 301
F + C+PN+ E F L+ LD +P +++ +LC
Sbjct: 362 FSYATCIPNSTVEDAIFKFNKLHEE-------------LDI--VPSSTSYENLVSYLCGS 406
Query: 302 KKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKL-AYENGTVPLALEMLKDIPGDMRKHAIK 360
+V A + + + E G + S N L L A E L +++ I M ++K
Sbjct: 407 NEVVTALDIVENMCEAG---LVISANILHSLLQAIEQ---ILEFNLVQRIYSIMSNKSVK 460
Query: 361 PYLAVVRA---LC-RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEM 416
P R LC R+KD A ++ ++ P ++++N ++ GY + ++ A+++
Sbjct: 461 PNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKV 520
Query: 417 MKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCK 476
+K ++ +KPD T++ +++ GE K +E K+ ++ +Y SLV+ Y
Sbjct: 521 LKEMKEADVKPDSVTFSYLIN---YCGEEATIAKYYKEMKQAGVEVNKHVYMSLVKAYAS 577
Query: 477 MEQFDEALKLLTEMK 491
QF++A ++L +++
Sbjct: 578 CGQFEKAKQVLMDLE 592
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 149/401 (37%), Gaps = 81/401 (20%)
Query: 112 ENVVSLLQREDADGSLESSLDAMDLTLHQDFVIIALRRNSWGHGLVENLLRFFRWVWKEN 171
E V ++ + L+ SL + + L +D + L+R + HG L F+R+
Sbjct: 43 ETVFRMINGSNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIR 102
Query: 172 SSNVTTPVVESLVHAVCSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQL 231
++ ++++++ + R ++F +WEL T + ++ ++L
Sbjct: 103 GFYHSSFSLDTMLYILG----RNRKFDQIWELLIETKRKDRSLISPRT-MQVVLGRVAKL 157
Query: 232 GNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKV 291
+ + +E F KF+ + VP+ FD+A
Sbjct: 158 CSVRQTVESFWKFK--RLVPD---------------FFDTAC-----------------F 183
Query: 292 GDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIP 351
+L LC+ K + +A VY ++
Sbjct: 184 NALLRTLCQEKSMTDARNVYHSL------------------------------------- 206
Query: 352 GDMRKHAIKPYLAVVRALCR-VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEM 410
KH +P L L K A+ +M G P +N +I Y K E+
Sbjct: 207 ----KHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREI 262
Query: 411 GQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSL 470
+A +++ + PDV TY ++ G G+ + AR++L+E K+ Y++
Sbjct: 263 EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAA 322
Query: 471 VRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+R +C + +A KL+ EM G+ + Y+ + L L
Sbjct: 323 IRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSL 363
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ-- 277
+ +KLI + G + A+ LF + + C P+A Y+ I A + H+ D A ++ +
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA-HLHTR-DKAKALEKVR 192
Query: 278 ----KMLDAQSI-PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGK 332
KM + P+ +L + KV + +A++K + P + + N ++
Sbjct: 193 GYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD- 251
Query: 333 LAY-ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP 391
AY +NG + +L + + K I + ++ + + ++ +Q ++ +
Sbjct: 252 -AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P FN +I Y K + +A + K + P TY ++ Y G + AR+I
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
EE ++ VL ++++ YC+ + EA KL V Y K +
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY-KFLYKAYT 429
Query: 512 KAMDWETAEKLQAEMKENGL 531
KA E + L +M+++G+
Sbjct: 430 KADMKEQVQILMKKMEKDGI 449
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 90/227 (39%), Gaps = 6/227 (2%)
Query: 285 IPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLAL 344
IPD ++ + K + + A ++ + G P S N L+ + AL
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK-AL 188
Query: 345 EMLKDIPGDMR-----KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
E ++ M+ + + Y ++RA + V L D+ + P FN
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
V+ Y K G + + ++ + S KPD+ T+ V++ Y E E + + ++
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLI 506
+ ++S++ Y K D+A + +M D S Y+ +I
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD--IP 351
I+ LCK K EA ++ ++ G P + + N ++ + + L EM++ +P
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFSSLGRAEKLYAEMIRRGLVP 78
Query: 352 GDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMG 411
+ Y +++ LC+ + A+++ + FN +I GY K +
Sbjct: 79 DTI------TYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVK 123
Query: 412 QAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLV 471
+ + + RG+ +V TY ++ G+ G+ A I +E N S + + ++
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 472 RGYCKMEQFDEALKLLTE 489
C ++ +A+ +L +
Sbjct: 184 PQLCSRKELRKAVAMLLQ 201
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 358 AIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
++P + + R +G A++L +MI G P +N +I G K ++ QA
Sbjct: 44 GLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---- 99
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
R + T+ +++GY ++ + E + V + + Y +L+ G+ ++
Sbjct: 100 -----RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQV 154
Query: 478 EQFDEALKLLTEMKDSGVRISVDEYDKLIQSLC 510
F+ AL + EM +GV S + ++ LC
Sbjct: 155 GDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 29/168 (17%)
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEME-------- 446
A +N +I G K G+ +A + L GL+PDV TY +++ +S+ G E
Sbjct: 15 AGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGRAEKLYAEMIR 73
Query: 447 -----------------AARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTE 489
+ L +A+K S +++L+ GYCK + + + L E
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCST--FNTLINGYCKATRVKDGMNLFCE 131
Query: 490 MKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
M G+ +V Y LI + D+ TA + EM NG+Y +T
Sbjct: 132 MYRRGIVANVITYTTLIHGF-RQVGDFNTALDIFQEMVSNGVYSSSIT 178
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 16/172 (9%)
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
FN ++ + EM +A + + L SR PDV T +++ G+ G++ A E
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDW 516
K + V Y + G+CK F EAL+L +M I+V LI + A +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGV-ARNK 296
Query: 517 ETAEKLQAEMKENGLYLK-GVTRAL-------------IRAVKEMENEAVEP 554
A +L E+ + GL G AL I+ +KEME + +EP
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEP 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 9/217 (4%)
Query: 325 SVNFLVGKLA----YENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQ 380
S++ L+ K+A YE T+ ++M K+I +K + + ++RA C +++ A+
Sbjct: 141 SMSILLCKIAKFGSYEE-TLEAFVKMEKEI--FRKKFGVDEFNILLRAFCTEREMKEARS 197
Query: 381 LILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYS 440
I + + + P N ++ G+ + G++ + RG KP+ TY + + G+
Sbjct: 198 -IFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFC 256
Query: 441 NGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVD 500
A ++ E+ + ++ + +L+ G +A +L E+ G+
Sbjct: 257 KKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCG 316
Query: 501 EYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
Y+ L+ SL +K D A K+ EM+E G+ VT
Sbjct: 317 AYNALMSSL-MKCGDVSGAIKVMKEMEEKGIEPDSVT 352
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQ-- 277
+ +KLI + G + A+ LF + + C P+A Y+ I A + H+ D A ++ +
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA-HLHTR-DKAKALEKVR 192
Query: 278 ----KMLDAQSI-PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGK 332
KM + P+ +L + KV + +A++K + P + + N ++
Sbjct: 193 GYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD- 251
Query: 333 LAY-ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPP 391
AY +NG + +L + + K I + ++ + + ++ +Q ++ +
Sbjct: 252 -AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P FN +I Y K + +A + K + P TY ++ Y G + AR+I
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
EE ++ VL ++++ YC+ + EA KL V Y K +
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY-KFLYKAYT 429
Query: 512 KAMDWETAEKLQAEMKENGL 531
KA E + L +M+++G+
Sbjct: 430 KADMKEQVQILMKKMEKDGI 449
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 90/227 (39%), Gaps = 6/227 (2%)
Query: 285 IPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLAL 344
IPD ++ + K + + A ++ + G P S N L+ + AL
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK-AL 188
Query: 345 EMLKDIPGDMR-----KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
E ++ M+ + + Y ++RA + V L D+ + P FN
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
V+ Y K G + + ++ + S KPD+ T+ V++ Y E E + + ++
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLI 506
+ ++S++ Y K D+A + +M D S Y+ +I
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 118/292 (40%), Gaps = 42/292 (14%)
Query: 250 VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA 309
V N T++ I + CK K+ EA +
Sbjct: 215 VENVNTFNLVIYS-----------------------------------FCKESKLFEALS 239
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAV 365
V+ +++ G +P + S N ++ A + G + AL++L + G M + + P Y +V
Sbjct: 240 VFYRMLKCGVWPNVVSFNMMIDG-ACKTGDMRFALQLLGKM-GMMSGNFVSPNAVTYNSV 297
Query: 366 VRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGL 425
+ C+ + A+++ DM+ +G + ++ Y + G +A+ + + S+GL
Sbjct: 298 INGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGL 357
Query: 426 KPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALK 485
+ Y IV G++E A +L + + + +VRG C+ EA++
Sbjct: 358 VVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVE 417
Query: 486 LLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
++ + + + ++ L+ ++ A+++ M GL L ++
Sbjct: 418 FQRQISEKKLVEDIVCHNTLMHHF-VRDKKLACADQILGSMLVQGLSLDAIS 468
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 8/288 (2%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
N TY + A R D A + +M + + I+ WL ++ A +V
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCR 371
+ + K + +V L NG V A+E + I I + ++ R
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLC-RNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 372 VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYT 431
K + A Q++ M+ G F +I GY K G++ +A+E+ + ++
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 432 YAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM- 490
Y IV+G S G AA ++ + + V Y++L+ K +EA +L++M
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQ 559
Query: 491 -KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
+D +S+ ++ +I LC K +E A+++ M E G+ +T
Sbjct: 560 KQDGEKSVSLVTFNIMINHLC-KFGSYEKAKEVLKFMVERGVVPDSIT 606
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%)
Query: 377 AAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIV 436
A + L M +NG P V N +I Y+K E+ +A+ + K + G +P+ YTY+ +V
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 437 SGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
G G + +E + V + Y L+ + DEA++++ +M + +
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 497 ISVDEYDKLIQSLCLKAMDWETAEKLQ 523
+ Y+ ++ LC E E ++
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEALEMVE 352
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 12/266 (4%)
Query: 236 AALELFDKFEFFQCVPNAETYHFTIQ-ALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDI 294
AA L DK + + ++H T Q RH L + S + + + + E V +
Sbjct: 56 AASSLPDKRLLNSLITHLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPILLEFETVRTV 115
Query: 295 LGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKD---IP 351
L + K A A+ + + + + P L+ + ENG++ L++ ++ I
Sbjct: 116 LESMKLAKASGPALALVECMFKNRYFVPFDLWGDLLIDVCRENGSLAAFLKVFRESCRIA 175
Query: 352 GDMRKHAIKPYL----AVVRALCR-VKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSK 406
D + +KP L A + A CR ++ + A+ LI M G P F F+ Y++
Sbjct: 176 VDEKLDFMKPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYAR 235
Query: 407 VGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKN---HSVLS 463
G + E+ L++ G Y+ ++SGY G++++A ++ + K S S
Sbjct: 236 KGLREKISELEDLMDGLGFASRRILYSSMISGYVKSGDLDSASDVILCSLKGVGEASSFS 295
Query: 464 PVMYHSLVRGYCKMEQFDEALKLLTE 489
Y LVRG+ + + + KL+ E
Sbjct: 296 EETYCELVRGFIESKSVESLAKLIIE 321
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ G K G + +A+++ L+ +G P+V Y +V + ++E A++I + + N
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ Y LV+G D+A+ +EM +SG +V + +L+ +LC + E A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC-RVKGVEQA 255
Query: 520 EKLQAEMKENGLYLKGVTRALIRAVKE 546
+ + + G + ++AVKE
Sbjct: 256 QSAIDTLNQKGFAVN------VKAVKE 276
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNH 459
++ G K G + +A+++ L+ +G P+V Y +V + ++E A++I + + N
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 460 SVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETA 519
+ Y LV+G D+A+ +EM +SG +V + +L+ +LC + E A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALC-RVKGVEQA 255
Query: 520 EKLQAEMKENGLYLKGVTRALIRAVKE 546
+ + + G + ++AVKE
Sbjct: 256 QSAIDTLNQKGFAVN------VKAVKE 276
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 131/310 (42%), Gaps = 14/310 (4%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
N Y T++ L F+ + ++ ++ E V I+ + + A V+
Sbjct: 70 NIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVF 129
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKP----YLAVVR 367
+ E+ S N L+ + L + K++PG K +I+P Y +++
Sbjct: 130 DEMPERNCKRTALSFNALLNA-CVNSKKFDLVEGIFKELPG---KLSIEPDVASYNTLIK 185
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
LC A LI ++ G P + FN ++ G+ + ++ + + +K
Sbjct: 186 GLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKR 245
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
D+ +Y + G + + E + ++ K N + ++++G+ + DEA+
Sbjct: 246 DIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWY 305
Query: 488 TEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLY-----LKGVTRALIR 542
E++ +G R ++ L+ ++C KA D E+A +L E+ L L+ V AL++
Sbjct: 306 KEIEKNGCRPLKFVFNSLLPAIC-KAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVK 364
Query: 543 AVKEMENEAV 552
K+ E E +
Sbjct: 365 GSKQDEAEEI 374
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 294 ILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGD 353
+LG K KK+ EA + ++ + S N ++ A ++G + A ++ + P
Sbjct: 225 LLGGFVKKKKIVEARQFFDSM----NVRDVVSWNTIITGYA-QSGKIDEARQLFDESP-- 277
Query: 354 MRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+ + A+V + + V A++L M P +N ++ GY + M A
Sbjct: 278 --VQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMA 331
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
E+ ++ R +V T+ +++GY+ G++ A+ + ++ K PV + +++ G
Sbjct: 332 KELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAG 383
Query: 474 YCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
Y + EAL+L +M+ G R++ + + S C + E ++L + + G
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL-STCADVVALELGKQLHGRLVKGG 439
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 6/181 (3%)
Query: 320 YPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAK 379
+ ++ FL +Y + L + + G RKH+ Y ++ LC++ + A
Sbjct: 89 FNTTATFKFLTNTDSYSSSLEDLRRILPQTDAGYTRKHS---YETLIARLCKLGRIDDAL 145
Query: 380 QLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGY 439
LI DM VF+ ++ +K + +A +++L+ S + DV +Y ++ +
Sbjct: 146 VLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSH 205
Query: 440 SNGGEM-EAARKILEEAKKNHSVLSP--VMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
G++ EA+R + + ++ V+SP Y +LV G CK + + A+ +L M++ G+
Sbjct: 206 CYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACKSGRVEAAMAILRRMEEEGLS 265
Query: 497 I 497
+
Sbjct: 266 V 266
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 63/120 (52%)
Query: 375 VGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAV 434
V A++L+L M + ++N ++ GYS+ G + + +E+ + SRG+ P+ TY V
Sbjct: 297 VEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWV 356
Query: 435 IVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
+++G G++ A L E + N + MY +L ++ D++L+++ EM G
Sbjct: 357 LMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDG 416
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 364 AVVRALCRVKDVGAAKQLILDM-IANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLES 422
VV LC ++ A++L+ +M + G F +I K + + ++KL+E
Sbjct: 215 VVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEK 274
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
+ D+ +Y V++ G+++ G++E A +++ + +Y+ ++ GY + ++
Sbjct: 275 ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEK 334
Query: 483 ALKLLTEMKDSGVRISVDEYDKLIQSLC--------------LKAMDWETAEKLQAEMKE 528
++L +EM GV + D Y L+ LC L+ ++E E++ + + E
Sbjct: 335 VIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSE 394
Query: 529 NGLYLKGVTRALIRAVKEMENEAVEP 554
Y G+ + V EM + P
Sbjct: 395 E-CYRVGMIDKSLEVVAEMIRDGFIP 419
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 130/305 (42%), Gaps = 28/305 (9%)
Query: 188 CSSSVREKEFYSLWELXXXXXXXXXXXXXXXTILNKLIFYFSQLGNGKAALELFDKFEFF 247
CSS RE +LW + N L+ +S+ G A LFD+
Sbjct: 36 CSSRNRE----TLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDE---- 87
Query: 248 QCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEA 307
+P+ +F+ + + S + D D ++ K ++ A
Sbjct: 88 --MPDRN--YFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVA 143
Query: 308 HAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVR 367
++ A+ EK + ++N L+ NG AL + K++ + AI V++
Sbjct: 144 RRLFNAMPEK----DVVTLNSLLHGYIL-NGYAEEALRLFKEL--NFSADAI-TLTTVLK 195
Query: 368 ALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKP 427
A ++ + KQ+ ++ G + + + ++ Y+K G++ A M++ + +P
Sbjct: 196 ACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR----EP 251
Query: 428 DVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLL 487
D ++ + ++SGY+N G + +R + + K N V ++++S++ GY EAL L
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDR-KSNRCV---ILWNSMISGYIANNMKMEALVLF 307
Query: 488 TEMKD 492
EM++
Sbjct: 308 NEMRN 312
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 371 RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVY 430
R +G A+ L +M P +N +I GY GE G ++ ++ R D Y
Sbjct: 74 RSGKMGIARNLFDEM----PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER----DGY 125
Query: 431 TYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEM 490
++ V+VSG++ GE+ AR++ + V +SL+ GY +EAL+L E+
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEK----DVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 491 KDSGVRISV 499
S I++
Sbjct: 182 NFSADAITL 190
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 121/293 (41%), Gaps = 38/293 (12%)
Query: 244 FEFFQC----VPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLC 299
F++ +C V N Y ++ L R +D A + +++ +V + + + C
Sbjct: 161 FDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYAC 220
Query: 300 KGK-KVKEAHAVYKAVVEKGKYPPMSSVNFLVG-----------KLAYEN----GTV--- 340
K VK A + ++E G P ++++ L+G + A+ + G V
Sbjct: 221 TKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES 280
Query: 341 ---------------PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDM 385
A E++ + D + ++ +L ++ A + + A+ +++ M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 386 IANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEM 445
A G P +N +ITGY K+ +M A + L + GL+PD +Y ++ G+
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 446 EAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRIS 498
E A+ +E K+ + +L+ K D A+K + +M G + S
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS 453
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
Y ++ A + KD I +M +G +N ++ Y K +M + ++K ++
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVM--YHSLVRGYCKMEQ 479
PD YTY ++++ Y G ++ +L+E K+ S L P + Y++L++ Y
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKE--SGLGPDLCSYNTLIKAYGIGGM 853
Query: 480 FDEALKLLTEMKDSGVRISVDEYDKLIQSL-----CLKAMDW 516
+EA+ L+ EM+ + Y L+ +L L+A+ W
Sbjct: 854 VEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKW 895
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 128/286 (44%), Gaps = 23/286 (8%)
Query: 247 FQCVPNAETY---HFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKK 303
F+ VP+ TY H + F++ S + + M + PDE ++ +
Sbjct: 66 FERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 304 VKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYL 363
V+ +V+ V+ G + +VG + L + + G+M + +
Sbjct: 126 VRVGSSVHGLVLRIG-----FDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWT 180
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESR 423
A+V A + ++ AK + D++ P +N ++ G K G++ A ++ + R
Sbjct: 181 ALVVAYVKSGELEEAKSM-FDLM---PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR 236
Query: 424 GLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEA 483
D+ +Y ++ GY+ GG+M +AR + EEA+ + + +L+ GY + Q +EA
Sbjct: 237 ----DIISYTSMIDGYAKGGDMVSARDLFEEARG----VDVRAWSALILGYAQNGQPNEA 288
Query: 484 LKLLTEMKDSGVRISVDEYDKL-IQSLCLKAMDWETAEKLQAEMKE 528
K+ +EM V+ DE+ + + S C + +E EK+ + + +
Sbjct: 289 FKVFSEMCAKNVK--PDEFIMVGLMSACSQMGCFELCEKVDSYLHQ 332
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 113/257 (43%), Gaps = 4/257 (1%)
Query: 251 PNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHA- 309
P+A TY+ + A R D ++ ++M D P+ + ++ + KK+ + A
Sbjct: 412 PSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAAD 471
Query: 310 VYKAVVEKGKYPPMSSVNFLVGKLAYE-NGTVPLALEMLKDIPGDMRKHAIKPYLAVVRA 368
+ + + G P S L+ AY +G A +++ + K +++ Y +V+ A
Sbjct: 472 AFLRMKKVGLKPSSHSYTALIH--AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 369 LCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPD 428
R D G ++ M+ +N ++ G++K G +A +++ GL+P
Sbjct: 530 FRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPS 589
Query: 429 VYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLT 488
V TY ++++ Y+ GG+ ++L+E + + Y +++ + ++ F A
Sbjct: 590 VMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHK 649
Query: 489 EMKDSGVRISVDEYDKL 505
M SG Y+KL
Sbjct: 650 MMVKSGQVPDPRSYEKL 666
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
Query: 344 LEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITG 403
L +L ++P ++ Y A + L + A ++ M P N +IT
Sbjct: 258 LLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITT 317
Query: 404 YSKVGEMGQAV-EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVL 462
K G + V E+ + + +G+K + +V + + G E A I E +K
Sbjct: 318 LRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRS 377
Query: 463 SPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKL 522
+ ++Y++L+ Y K +E L TEM+D G++ S Y+ L+ + + M + E L
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA-RRMQPDIVETL 436
Query: 523 QAEMKENGL 531
EM++ GL
Sbjct: 437 LREMEDLGL 445
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 18/298 (6%)
Query: 219 TILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQK 278
++ N LI +S+ NGK LEL K N +++ + + + D A + +
Sbjct: 125 SMCNSLIVMYSR--NGK--LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDE 180
Query: 279 MLDAQSIPDEEKVGDIL-GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYEN 337
M PD +L G+ KG K+A AV K + G P SS++ L+ +A
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLS-KDAIAVLKRMQIAGLKPSTSSISSLLQAVAE-- 237
Query: 338 GTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRV---KDVGAAKQLILDMIANGPPPGN 394
P L++ K I G + ++ + + V L + +++ DM+
Sbjct: 238 ---PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM---DAKNI 291
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
+N +++G S + A +M +E G+KPD T+ + SGY+ G+ E A ++ +
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK 351
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL-CL 511
K+ + V + ++ G K F ALK+ +M++ GV + L++ L CL
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 255 TYHFTIQALYRHSLFDSASSVSQKML-DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKA 313
TY+ I + +F+ SV M+ D S+PD + I+G G+ +++ + Y
Sbjct: 252 TYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSR 311
Query: 314 VVEKGKYPPMSSVNFLV---GK---------------------------LAYENGTVPLA 343
G P +++ N L+ GK + E
Sbjct: 312 FQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGR 371
Query: 344 LEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNF 399
+E + D+ M+ +KP Y ++V A + V ++ ++ + FN
Sbjct: 372 IEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNC 431
Query: 400 VITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
+I Y + G++ E+ +E R KPD T+A ++ Y+ G +A +++
Sbjct: 432 IINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQEL 483
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 360 KPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL 419
K Y + + L K A L M++ G P V+ +I+ Y K + +A ++
Sbjct: 145 KTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEY 204
Query: 420 LES-RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKME 478
++S KPDV+T+ V++S G + + I+ E S V Y++++ GY K
Sbjct: 205 MKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAG 264
Query: 479 QFDEALKLLTEMKDSG 494
F+E +L +M + G
Sbjct: 265 MFEEMESVLADMIEDG 280
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
A +N +I+GYS G QA+ ++ +++ R KP+ T+ ++SG SN G ++ ++ E
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 455 AKKNHSVLSPVMYH--SLVRGYCKMEQFDEALKLL 487
++H + P + H +VR + Q D+A+KL+
Sbjct: 576 MIRDHGI-EPCLEHYTCMVRLLGRSGQLDKAMKLI 609
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%)
Query: 358 AIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
+I Y ++ + + ++++ M NG P ++ YSK G +A E
Sbjct: 383 SISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAF 442
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKM 477
+ L+S GL+PD Y ++ GY N G+ + ++++E + S +Y +L+R Y +M
Sbjct: 443 ENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQM 502
Query: 478 EQFDEALKLLTEMK 491
+ A + + M+
Sbjct: 503 GDANGAAGISSSMQ 516
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 359 IKPYLAVVRALCRV-KDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMM 417
++ + ++ C + DV AK++ +M P ++ +I+ +SKVG + ++ +
Sbjct: 258 VEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLY 317
Query: 418 KLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP--VMYHSLVRGYC 475
++ RGL P + Y +V + + A K+++ K N L P V Y+S++R C
Sbjct: 318 DEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMK--KLNEEGLKPDSVTYNSMIRPLC 375
Query: 476 KMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGL 531
+ + D A +L M + +VD + L+A+++E ++ +MK + L
Sbjct: 376 EAGKLDVARNVLATMISENLSPTVDTFHAF-----LEAVNFEKTLEVLGQMKISDL 426
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 119/294 (40%), Gaps = 9/294 (3%)
Query: 220 ILNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKM 279
I KLI + + A ELF + CV N E Y + A R FD+A ++ ++M
Sbjct: 152 IYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERM 211
Query: 280 LDAQSI-PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENG 338
+ + PD ++ + + + + +G P + N L+ AY G
Sbjct: 212 KSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLID--AY--G 267
Query: 339 TVPLALEMLKDIPGDMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGN 394
+ +EM + + + KP + +RA + + ++G P
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNI 327
Query: 395 AVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
FN ++ Y K G + +M+ ++ + TY V++ + G+++ +
Sbjct: 328 RTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRL 387
Query: 455 AKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
+ S V SLVR Y + + D+ +L +++S +R+ + ++ L+ +
Sbjct: 388 MQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDA 441
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 392 PGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKI 451
P ++ +I K + +A E+ + + + G + Y +VS YS G +AA +
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 452 LEEAKKNHSVLSPV-MYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQS 508
LE K +H+ V Y L++ + ++ FD+ LL++M+ G+R + Y+ LI +
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAV-FNFVITGYSKVGEMGQAVEMMK-LLE 421
A++ R+ D+ +A+QL M P N V +N +I GY+ G+ A+E + +++
Sbjct: 336 AMISGYTRIGDMSSARQLFDTM-----PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFD 481
KPD T ++S + ++E I++ +KN L+ Y SL+ Y +
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 482 EALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKGVT 537
EA ++ EMK+ V Y+ L + ET L ++MK+ G+ VT
Sbjct: 451 EAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLN-LLSKMKDEGIEPDRVT 501
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 362 YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLE 421
YL + RA D L+ ++ + P V N +I +++ ++ + + ++K ++
Sbjct: 145 YLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMK 204
Query: 422 SRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV-LSPVMYHSLVRGYCKMEQF 480
KPDV TY ++ G + +L K++ SV ++ + Y++++ G K +F
Sbjct: 205 EWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRF 264
Query: 481 DEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENGLYLKG-VTRA 539
D L + EM G+ + Y +I SL ++ + + + +L EMK+ + V RA
Sbjct: 265 DMCLVIYNEMVQCGIEPDLLSYTAVIDSLG-RSGNVKESLRLFDEMKQRQIRPSVYVYRA 323
Query: 540 LIRAVKE 546
LI +K+
Sbjct: 324 LIDCLKK 330
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 123/304 (40%), Gaps = 38/304 (12%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
+ +TY+ + L + D ++ +M A + E + C+ K +KEA ++
Sbjct: 286 DEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLF 345
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPG------DMRKHAIKPYL-- 363
+ + G + N T +LK I D+ A+K Y
Sbjct: 346 EIA--------------MAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKN 391
Query: 364 ----------AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQA 413
+V+++L V V + +L+ +M G P + + + + S+ G+ +A
Sbjct: 392 GNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEA 451
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSV-LSPVMYHSLVR 472
E + +ES G D A +V GY + G ++ A E+ N V + + LV
Sbjct: 452 DEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVL 511
Query: 473 GYCKMEQFDEALKLLT-EMKDSGVRISVDEYDKLIQSLCLKAM----DWETAEKLQAEMK 527
YC Q +A KLL+ ++ + ++ Y L+ +L K + +E A L MK
Sbjct: 512 AYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMK 571
Query: 528 ENGL 531
++G
Sbjct: 572 DHGF 575
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 289 EKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLK 348
E V +L + K A A+ K + + + P LV + ENG++ L++ K
Sbjct: 138 ETVRTLLESMKLAKAAGPALALVKCMFKNRYFVPFDLWGHLVIDICRENGSLAPFLKVFK 197
Query: 349 D---IPGDMRKHAIKPYL----AVVRALCR-VKDVGAAKQLILDMIANGPPPGNAVFNFV 400
+ I D + +KP L A + A CR ++ + A+ +I M G P F F+
Sbjct: 198 ESCRISVDEKLEFMKPDLVASNAALEACCRQMESLADAENVIESMAVLGVKPDELSFGFL 257
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKK--- 457
Y++ G + E+ L++ G Y+ ++SGY G++++ ++ + K
Sbjct: 258 AYLYARKGLREKISELENLMDGFGFASRRILYSNMISGYVKSGDLDSVSDVILHSLKEGG 317
Query: 458 NHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
S S Y LV+G+ + + K++ E +
Sbjct: 318 EESSFSVETYCELVKGFIESKSVKSLAKVILEAQ 351
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 104/266 (39%), Gaps = 40/266 (15%)
Query: 256 YHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVV 315
Y+ + L + + D + +M+ P+++ + L + CK V EA +Y++
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 316 EKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDV 375
E G P S N+L+ L N +V A ++LK
Sbjct: 420 EIGFAPTAMSYNYLIHTLC-ANESVEQAYDVLK--------------------------- 451
Query: 376 GAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVI 435
GA I G G F+ + G+ A E++ R L P I
Sbjct: 452 GA--------IDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKI 503
Query: 436 VSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGV 495
+S + G++E A I E K+ S M+ SL+ G + + D A KL+ M++ G
Sbjct: 504 ISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGY 563
Query: 496 RISVDEYDKLIQSLCLKAMDWETAEK 521
+ Y +IQ +C + E+ EK
Sbjct: 564 TPTRSLYRNVIQCVC----EMESGEK 585
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/346 (18%), Positives = 129/346 (37%), Gaps = 39/346 (11%)
Query: 221 LNKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKML 280
+N + +F + G ALEL+ P A +Y++ I L + + A V + +
Sbjct: 395 MNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAI 454
Query: 281 DAQSIPDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
D + + LC K A + A E+ P + ++ L + G V
Sbjct: 455 DRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALC-DVGKV 513
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAV---- 396
AL + + + K + +++ + A +LI+ M G P ++
Sbjct: 514 EDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNV 573
Query: 397 --------------------------------FNFVITGYSKVGEMGQAVEMMKLLESRG 424
+N I G G+ A + +++ G
Sbjct: 574 IQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDG 633
Query: 425 LKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEAL 484
+ P V + +++ Y ++ A + ++ +Y ++ G CK + D+A+
Sbjct: 634 ITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKT-KKRLYQVMIVGLCKANKLDDAM 692
Query: 485 KLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKENG 530
L EMK G++ S++ Y+ IQ LC ++ A L E +++G
Sbjct: 693 HFLEEMKGEGLQPSIECYEVNIQKLC-NEEKYDEAVGLVNEFRKSG 737
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 286 PDEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVG-KLAYENGTVPLAL 344
P+ E G ++ LC+ + EA ++ L G KL E A+
Sbjct: 39 PNHEDGGVVVERLCRANRFGEA------------------IDVLCGQKLLRE------AV 74
Query: 345 EMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGY 404
++L G +K Y +++ + + + K++ + +G PG ++N ++ Y
Sbjct: 75 QLL----GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMY 130
Query: 405 SKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSP 464
+K G + A ++ + +R D+ ++ V+V+GY+ G +E ARK+ +E + S
Sbjct: 131 AKCGSLVDARKVFDEMPNR----DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS---- 182
Query: 465 VMYHSLVRGYCKMEQFDEALKLLTEMK 491
+ ++V GY K +Q +EAL L + M+
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQ 209
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 11/193 (5%)
Query: 353 DMRKHAIKPYLAVVRALC---RVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGE 409
D+ + Y A +R LC R + A+ + ++I G P + N +I Y K E
Sbjct: 6 DLVRAIANRYAANLR-LCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSE 64
Query: 410 MGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHS 469
+ A ++ + +PD +VSGY G++ AR + E+A + VMY++
Sbjct: 65 LNYARQLFDEIS----EPDKIARTTMVSGYCASGDITLARGVFEKAPV--CMRDTVMYNA 118
Query: 470 LVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQ-AEMKE 528
++ G+ A+ L +MK G + + ++ L L A D + + A +K
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKS 178
Query: 529 NGLYLKGVTRALI 541
Y+ V+ AL+
Sbjct: 179 GAGYITSVSNALV 191
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 13/174 (7%)
Query: 364 AVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKL-LES 422
V+ A R GA QL + G P +N + Y V + A+E KL +++
Sbjct: 135 TVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDN 194
Query: 423 RGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDE 482
L P + T+ ++V G + +E A +I E+ V+ PV+Y L+ G K D
Sbjct: 195 APLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADG 254
Query: 483 ALKLLTEMK-------DSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMKEN 529
LKL E+K D GV Y +L++ +K M+ E E + + EN
Sbjct: 255 VLKLYQELKEKLGGFVDDGVV-----YGQLMKGYFMKEMEKEAMECYEEAVGEN 303
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 390 PPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAAR 449
P ++N +I+GY ++G M +A + + R DV ++ ++ GY+N G+MEA
Sbjct: 86 PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYANIGDMEACE 141
Query: 450 KILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSL 509
++ ++ + +V S ++ L++GY + + E L M D G + D L+ S
Sbjct: 142 RVFDDMPE-RNVFS---WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSA 197
Query: 510 CLK 512
C K
Sbjct: 198 CAK 200
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 49/180 (27%)
Query: 370 CRVKDVGAAKQLILDMIANGPPPGNAV-FNFVITGYSKVGEMGQAVEMMKLLESR--GLK 426
C+ +++G A+QL M P N + FN +I+GY+++G QA+E+ LE+R LK
Sbjct: 93 CKCRELGFARQLFDRM-----PERNIISFNSLISGYTQMGFYEQAMEL--FLEAREANLK 145
Query: 427 PDVYTYA---------------------VIVSG--------------YSNGGEMEAARKI 451
D +TYA V+V+G YS G+++ A +
Sbjct: 146 LDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSL 205
Query: 452 LEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCL 511
+ + V ++SL+ GY ++ +E L LL +M G+ ++ ++++ C+
Sbjct: 206 FDRCDER----DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCI 261
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 377 AAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIV 436
+ L M+ +G P N ++ G + E++ ++ +G P+ +Y +V
Sbjct: 206 TVRSLFRQMVDSGIEPDVFALNCLVKGRTI-----NTRELLSEMKGKGFVPNGKSYNSLV 260
Query: 437 SGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
+ ++ GE++ A K L E +N V+ + Y +LV C+ ++DEA +LL +++ +
Sbjct: 261 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL- 319
Query: 497 ISVDEYDKL 505
+ +D DKL
Sbjct: 320 VDIDSDDKL 328
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 377 AAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIV 436
+ L M+ +G P N ++ G + E++ ++ +G P+ +Y +V
Sbjct: 231 TVRSLFRQMVDSGIEPDVFALNCLVKGRTI-----NTRELLSEMKGKGFVPNGKSYNSLV 285
Query: 437 SGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVR 496
+ ++ GE++ A K L E +N V+ + Y +LV C+ ++DEA +LL +++ +
Sbjct: 286 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQL- 344
Query: 497 ISVDEYDKL 505
+ +D DKL
Sbjct: 345 VDIDSDDKL 353
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 353 DMRKHAIKP----YLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVG 408
+M ++ + P L V+ A +VKD K++ + P + N ++ Y+ G
Sbjct: 226 EMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
Query: 409 EMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYH 468
EM AV + + +++R DV ++ IV GY G ++ AR ++ V + +
Sbjct: 286 EMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQM----PVRDRISWT 337
Query: 469 SLVRGYCKMEQFDEALKLLTEMKDSGV 495
++ GY + F+E+L++ EM+ +G+
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGM 364
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 385 MIANGPPPGNAVFNFVITGYSKVG--EMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNG 442
M+++ P N F VI + + +G+ V ++ GL D Y A +V+ YS
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL--DTYVQAALVTFYSKC 155
Query: 443 GEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSG 494
G+ME AR++ + + S V ++SLV G+ + DEA+++ +M++SG
Sbjct: 156 GDMEGARQVFDRMPEK----SIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 397 FNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAK 456
+N +I GY K+GE +A+ + KL+ES G+KPD T +VS S G++ ++ E K
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284
Query: 457 KNHSVLSPVMYHSLVRGYCKMEQFDEALKLLTEMK 491
+N ++ + ++L+ + K EA ++ ++
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 132/317 (41%), Gaps = 20/317 (6%)
Query: 222 NKLIFYFSQLGNGKAALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLD 281
N L+ ++ LG + ++FD+ V +++ I + + F+ A V ++M
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVV----SWNGLISSYVGNGRFEDAIGVFKRMSQ 140
Query: 282 AQSIP-DEEKVGDILGWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTV 340
++ DE + L K ++ +Y+ VV + + ++ +G +
Sbjct: 141 ESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFE------MSVRIGNALVDMFCK 194
Query: 341 PLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFV 400
L+ + + MR +K + ++V + A+ L P ++ +
Sbjct: 195 CGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF----ERSPVKDVVLWTAM 250
Query: 401 ITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHS 460
+ GY + +A+E+ + +++ G++PD + +++G + G +E + I +N
Sbjct: 251 MNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRV 310
Query: 461 VLSPVMYHSLVRGYCKMEQFDEALKLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAE 520
+ V+ +LV Y K + AL++ E+K+ + LI L + M A
Sbjct: 311 TVDKVVGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIYGLAMNGMSGR-AL 365
Query: 521 KLQAEMKENGLYLKGVT 537
L EM+ G+ L +T
Sbjct: 366 DLYYEMENVGVRLDAIT 382
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 109/261 (41%), Gaps = 17/261 (6%)
Query: 236 AALELFDKFEFFQCVPNAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDIL 295
+AL+L+ +PN+ T+ F +++ + F + +L D ++
Sbjct: 117 SALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 176
Query: 296 GWLCKGKKVKEAHAVYKAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEMLKDIPGDMR 355
+ ++++AH V+ +K + + S L+ A G + A ++ +IP
Sbjct: 177 SMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGYA-SRGYIENAQKLFDEIPVK-- 229
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVG--EMGQA 413
+ + A++ + A +L DM+ P + V++ ++ G E+G+
Sbjct: 230 --DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
V + ++ G ++ ++ YS GE+E A + E + +++L+ G
Sbjct: 288 VHLW--IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGG 341
Query: 474 YCKMEQFDEALKLLTEMKDSG 494
Y M + EAL L EM SG
Sbjct: 342 YTHMNLYKEALLLFQEMLRSG 362
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 380 QLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLKPDVYTYAVIVSGY 439
+L +M G + +I G + G+ A E+ K + S G+ PD+ TY +++ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 440 SNGGEMEAA--RKILEEAKKNHSVLS-------PVMYHSLVRGYCKMEQFDEALKLLTEM 490
G++E A +E+ LS V Y +++ G+CK +EA L +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 491 KDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQAEMK 527
K+ G Y+ LI++ L+ D + +L EM+
Sbjct: 122 KEDGPLPDSGTYNTLIRAH-LRDGDKAASAELIKEMR 157
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 414 VEMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRG 473
+E+ + + RGL + TY ++ G G+ + A++I +E + + Y+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 474 YCKMEQFDEAL---------KLLTEMKDSGVRISVDEYDKLIQSLCLKAMDWETAEKLQA 524
CK + ++AL L + GV+ +V Y +I C K E A L
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK-EEAYTLFR 119
Query: 525 EMKENG-LYLKGVTRALIRA 543
+MKE+G L G LIRA
Sbjct: 120 KMKEDGPLPDSGTYNTLIRA 139
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 336 ENGTVPLALEMLKDIPGDMRKHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNA 395
++GT A+E+++ + G + + ++ +L + ++ A L +M+ G NA
Sbjct: 186 DSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNA 245
Query: 396 VFNFVITGYSKVGEMGQAV-EMMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEE 454
+N I K E + V E+++ + S GLKPD +Y +++ Y G ++ A+K+ E
Sbjct: 246 AYNVRIMSAQK--ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEG 303
Query: 455 AKKNHSVLSPVMYHSLVRGYC 475
+ N+ + + +L+ C
Sbjct: 304 LEGNNCAPNAATFRTLIFHLC 324
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 99/251 (39%), Gaps = 19/251 (7%)
Query: 252 NAETYHFTIQALYRHSLFDSASSVSQKMLDAQSIPDEEKVGDILGWLCKGKKVKEAHAVY 311
NA + I A + D A + ML + P +L L + + ++
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIH 207
Query: 312 KAVVEKGKYPPMSSVNFLVGKLAYENGTVPLALEM--LKDIPGDMRKHAIKPYLAVVRAL 369
V+ G L + E G V + ++ L + A+K +A +
Sbjct: 208 AHVIRAG----------LCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 370 CRVKDVGAAK---QLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVEMMKLLESRGLK 426
G A+ +L +D++ G + VF+ V+ + + E+ ++ + GL+
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 427 PDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYCKMEQFDEALKL 486
+V +V Y E+A + +E ++ + V + +++ GYC+M QF+EA+K
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV----SWSAIISGYCQMSQFEEAVKT 373
Query: 487 LTEMKDSGVRI 497
++ I
Sbjct: 374 FKSLRSKNASI 384
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 356 KHAIKPYLAVVRALCRVKDVGAAKQLILDMIANGPPPGNAVFNFVITGYSKVGEMGQAVE 415
K+ P+ A++ + + V A L M P A N ++ Y+ + ++ QA+
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 416 MMKLLESRGLKPDVYTYAVIVSGYSNGGEMEAARKILEEAKKNHSVLSPVMYHSLVRGYC 475
+ L G + +V YS G +E+A KI ++ H V++ +L+ GY
Sbjct: 442 IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 476 KMEQFDEALKLLTEMKDSGV 495
AL++ EM SGV
Sbjct: 502 MHGDGHNALQVFMEMVRSGV 521