Miyakogusa Predicted Gene

Lj2g3v1964060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1964060.1 Non Chatacterized Hit- tr|A5AQA3|A5AQA3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.1,0.000000000000006,seg,NULL,CUFF.38091.1
         (196 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67390.2 | Symbols:  | unknown protein; BEST Arabidopsis thal...    67   1e-11
AT5G67390.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    67   1e-11
AT1G26620.1 | Symbols:  | Plant protein of unknown function (DUF...    50   1e-06

>AT5G67390.2 | Symbols:  | unknown protein; BEST Arabidopsis
          thaliana protein match is: Plant protein of unknown
          function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast
          hits to 186 proteins in 18 species: Archae - 0;
          Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170;
          Viruses - 0; Other Eukaryotes - 16 (source: NCBI
          BLink). | chr5:26887883-26888512 REVERSE LENGTH=176
          Length = 176

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 41/49 (83%)

Query: 1  MEKPVRHCHKEYMRMAMLKHEETFKEQVHELHCLYRIQKILMKNMEASK 49
          MEK +    K+ M+MAMLKHEETFK+QV+ELH LY++QKILMKNME +K
Sbjct: 1  MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILMKNMEINK 49


>AT5G67390.1 | Symbols:  | unknown protein; BEST Arabidopsis
          thaliana protein match is: Plant protein of unknown
          function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast
          hits to 1807 proteins in 277 species: Archae - 0;
          Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
          Viruses - 0; Other Eukaryotes - 339 (source: NCBI
          BLink). | chr5:26887883-26888512 REVERSE LENGTH=176
          Length = 176

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 41/49 (83%)

Query: 1  MEKPVRHCHKEYMRMAMLKHEETFKEQVHELHCLYRIQKILMKNMEASK 49
          MEK +    K+ M+MAMLKHEETFK+QV+ELH LY++QKILMKNME +K
Sbjct: 1  MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILMKNMEINK 49


>AT1G26620.1 | Symbols:  | Plant protein of unknown function
          (DUF863) | chr1:9195838-9198719 REVERSE LENGTH=867
          Length = 867

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 11/62 (17%)

Query: 10 KEYMRMAMLKHEETFKEQVHELHCLYRIQKILMKNMEASKGIEVIQGWNIKNLISLTQNG 69
          K++M+  ML+HE  FK QVHELH LYR+QK L         +E ++G N+  +++++   
Sbjct: 15 KDFMKHTMLEHEAVFKNQVHELHRLYRVQKNL---------VEEVKGKNLNEVMNVSD-- 63

Query: 70 HH 71
          HH
Sbjct: 64 HH 65