Miyakogusa Predicted Gene

Lj2g3v1931930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1931930.1 tr|G7K3X2|G7K3X2_MEDTR Sigma factor sigB
regulation protein rsbQ OS=Medicago truncatula
GN=MTR_2g089,87.78,0,Abhydrolase_6,NULL; SIGMA FACTOR SIGB REGULATION
PROTEIN RSBQ,NULL; ALPHA/BETA HYDROLASE FOLD-CONTAI,CUFF.38077.1
         (288 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37470.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   444   e-125
AT3G03990.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   320   8e-88
AT3G24420.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...   229   2e-60
AT5G19850.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    64   2e-10

>AT4G37470.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr4:17617045-17618363 REVERSE LENGTH=270
          Length = 270

 Score =  444 bits (1143), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 203/268 (75%), Positives = 246/268 (91%)

Query: 1   MGIVEEAHNVKVLGSGTRAIVLAHGFGTDQSLWKHFVPYLTNDFRVILYDNMGAGTTNPE 60
           MG+VEEAHNVKV+GSG   IVL HGFGTDQS+WKH VP+L +D+RV+LYDNMGAGTTNP+
Sbjct: 1   MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 60

Query: 61  YFDFERHSSLEGYAYDLLSILEELRVDSCIFVGHSVSAMIGAVASISRPDLFSKIIMVGA 120
           YFDF+R+S+LEGY++DL++ILE+L+++SCIFVGHSVSAMIG +AS++RPDLFSKI+M+ A
Sbjct: 61  YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISA 120

Query: 121 SPRYLNDVNYYGGFEQEDLNQLFDAMAANYKAWCLGFAPLAVGGDMESVAVQEFSRTLFN 180
           SPRY+NDV+Y GGFEQEDLNQLF+A+ +NYKAWCLGFAPLAVGGDM+S+AVQEFSRTLFN
Sbjct: 121 SPRYVNDVDYQGGFEQEDLNQLFEAIRSNYKAWCLGFAPLAVGGDMDSIAVQEFSRTLFN 180

Query: 181 MRPDIALTVSRTIFQSDMRGILSLVTVPCHIIQAQKDMAVPVVVSEFLHQHLGGVSIVEV 240
           MRPDIAL+V +TIFQSDMR IL  VTVPCHI+Q+ KD+AVPVVVSE+LH +LG  S+VEV
Sbjct: 181 MRPDIALSVGQTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEV 240

Query: 241 MATDGHLPQLSSPDIVIPVLLKHIHLDI 268
           + +DGHLPQLSSPD VIPV+L+HI  DI
Sbjct: 241 IPSDGHLPQLSSPDSVIPVILRHIRNDI 268


>AT3G03990.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:1033788-1034591 FORWARD LENGTH=267
          Length = 267

 Score =  320 bits (819), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 147/248 (59%), Positives = 198/248 (79%), Gaps = 1/248 (0%)

Query: 6   EAHNVKVLGSGTRAIVLAHGFGTDQSLWKHFVPYLTNDFRVILYDNMGAGTTNPEYFDFE 65
           EA NV+V+G+G R + LAHGFGTDQS W   +PY T ++RV+LYD + AG+ NP+YFDF 
Sbjct: 8   EALNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFTQNYRVVLYDLVCAGSVNPDYFDFN 67

Query: 66  RHSSLEGYAYDLLSILEELRVDSCIFVGHSVSAMIGAVASISRPDLFSKIIMVGASPRYL 125
           R+++L+ Y  DLL+I++ L + +C +VGHSVSAMIG +ASI RP+LFSK+I++G SPR+L
Sbjct: 68  RYTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLILIGFSPRFL 127

Query: 126 NDVNYYGGFEQEDLNQLFDAMAANYKAWCLGFAPLAVGGDMESVAVQEFSRTLFNMRPDI 185
           ND +Y+GGFE+ ++ ++F AM ANY+AW  GFAPLAVG D+ + AV+EFSRTLFNMRPDI
Sbjct: 128 NDEDYHGGFEEGEIEKVFSAMEANYEAWVHGFAPLAVGADVPA-AVREFSRTLFNMRPDI 186

Query: 186 ALTVSRTIFQSDMRGILSLVTVPCHIIQAQKDMAVPVVVSEFLHQHLGGVSIVEVMATDG 245
           +L VSRT+F SD+RG+L LV VP  +IQ  KD++VP  V+E+L  HLGG + VE + T+G
Sbjct: 187 SLFVSRTVFNSDLRGVLGLVRVPTCVIQTAKDVSVPASVAEYLRSHLGGDTTVETLKTEG 246

Query: 246 HLPQLSSP 253
           HLPQLS+P
Sbjct: 247 HLPQLSAP 254


>AT3G24420.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr3:8863111-8864883 REVERSE LENGTH=273
          Length = 273

 Score =  229 bits (584), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 103/248 (41%), Positives = 171/248 (68%), Gaps = 3/248 (1%)

Query: 7   AHNVKVLGSGTRAIVLAHGFGTDQSLWKHFVPYLTNDFRVILYDNMGAGTTNPE-YFDFE 65
           A N K++GSG R++VLAHGFG DQS+W   +P L+  F+V+++D + +G    +  +D  
Sbjct: 13  AMNAKIIGSGERSMVLAHGFGGDQSVWDKIIPVLSQSFKVLVFDWLFSGAIKDQTLYDPS 72

Query: 66  RHSSLEGYAYDLLSILEELRVDSCIFVGHSVSAMIGAVASISRPDLFSKIIMVGASPRYL 125
           +++SL+ ++ DL++++EEL+    +FVGHS+S +IG  ASI RPDLF+ ++++ ASPRY+
Sbjct: 73  KYNSLDVFSDDLIALMEELKFGPVVFVGHSMSGVIGCAASIKRPDLFTNLLLIAASPRYI 132

Query: 126 NDVNYYGGFEQEDLNQLFDAMAANYKAWCLGFAPLAVGGDMESVAVQEFSRTLFNMRPDI 185
           N  +Y GGFE +D++ +  ++ +NY+AW + F+   V    +S++VQ F ++L  M+P+ 
Sbjct: 133 NSEDYKGGFESKDIDTIITSIGSNYEAWAVDFSSFVVDS-RDSLSVQRFEKSLKKMKPET 191

Query: 186 ALTVSRTIFQSDMRGILSLVTVPCHIIQAQKDMAVPVVVSEFLHQHLGGVSIVEVMATD- 244
           AL +++ +F SD R IL  V+VPCH+IQ   D+ VPV V+ F+ + + G S VE++    
Sbjct: 192 ALALAKIVFGSDEREILGQVSVPCHVIQPGNDVVVPVSVAYFMQEKIKGKSTVEIIEDAI 251

Query: 245 GHLPQLSS 252
           GH PQ++S
Sbjct: 252 GHFPQMTS 259


>AT5G19850.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr5:6709976-6711662 REVERSE LENGTH=359
          Length = 359

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 27/268 (10%)

Query: 14  GSGTRAIVLAHGFGTDQSLWKHFVPYLTNDFRVILYDNMGAGTT---NPEYFDFERHSSL 70
           G+   A+VL HGFG +   W+   P L    RV   D +G G +   NP  F  E   + 
Sbjct: 91  GTSGPALVLVHGFGANSDHWRKNTPILGKTHRVYSIDLIGYGYSDKPNPREFGGEPFYTF 150

Query: 71  EGYAYDLLSILEELRVDSCIFVGHSVSAMIGAVASISRPDLFSKIIMVGASPRYLNDVNY 130
           E +   L     ++  D   F+ +S+  ++G  A++S+P++   ++++  S R L+    
Sbjct: 151 ETWGEQLNDFCLDVVKDEAFFICNSIGGLVGLQAAVSKPEICRGLMLINISLRMLHIKKQ 210

Query: 131 YGGFEQEDLNQLFDAMAANYKAWCLGFAPLAVGGDMESVAVQ------EFSRTLFN--MR 182
              F      + F  +  N     L F  +A    ++S+  Q      + +  L    +R
Sbjct: 211 --PFIGRPFIKSFQNLLRNTPVGKLFFKSIAKPETVKSILCQCYHDSSQVTDELVEAILR 268

Query: 183 PDIA----------LTVSRTIFQSDMRGILSLVTVPCHIIQAQKDMAVPVVVSEFLHQHL 232
           P +           +  S      D+   L LV  P  I   +KD   P+ +    + + 
Sbjct: 269 PGLEPGAVDVFLEFICYSGGPLPEDL---LPLVKCPVLIAWGEKDPWEPIELGR-AYSNF 324

Query: 233 GGVSIVEVMATDGHLPQLSSPDIVIPVL 260
             V    V+   GH PQ   P++V P++
Sbjct: 325 DAVEDFVVLPDAGHCPQDEKPEMVNPLI 352