Miyakogusa Predicted Gene

Lj2g3v1915600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1915600.1 Non Chatacterized Hit- tr|I3S6W4|I3S6W4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.47,0,seg,NULL;
CH,Calponin homology domain; EB1_C,EB1, C-terminal; no
description,Calponin homology domai,CUFF.38052.1
         (327 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67270.1 | Symbols: ATEB1C, EB1C, ATEB1H1 | end binding prote...   408   e-114
AT3G47690.1 | Symbols: ATEB1A, EB1A, ATEB1H2 | microtubule end b...   303   1e-82
AT5G62500.1 | Symbols: ATEB1B, ATEB1, EB1B | end binding protein...   295   2e-80

>AT5G67270.1 | Symbols: ATEB1C, EB1C, ATEB1H1 | end binding protein
           1C | chr5:26840248-26841984 REVERSE LENGTH=329
          Length = 329

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/343 (61%), Positives = 245/343 (71%), Gaps = 30/343 (8%)

Query: 1   MATNIGIMDAAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLLDVVHPGIVPMHKV 60
           MATNIG+MD+AYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQL+D VHPG VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLMDSVHPGTVPMHKV 60

Query: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSG 120
           NFDAK+EY+MIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMK+YCDSVN G
Sbjct: 61  NFDAKSEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKKYCDSVNGG 120

Query: 121 LQHNYNPRERREVCKGGKEATRKSAHSQ-------------SSNKGSTAQRPPSSHNSRR 167
            QHNY+  ERRE  KGGKEAT+++A +Q              S+   T +  P S+N+  
Sbjct: 121 -QHNYHALERREASKGGKEATKRAAATQQSGKSSSSSAPPRPSSSNGTRKHEPQSNNTGT 179

Query: 168 NEXXXXXXXXXXXXXXXXXXXXXXXXYDEQITELKLAIDSLEKEPDFYFAKLRDIEILCQ 227
           +                         YDE+ITELKL IDSLEKE DFYF+KLRD+EILCQ
Sbjct: 180 HHSSTGNHHHSSKPSAKQSKPVPA--YDEKITELKLYIDSLEKERDFYFSKLRDVEILCQ 237

Query: 228 IPEIENSPVVAAMQKILYATDDDGTAVAEAQAMLSAAHEEVERLSPIAEVSEEK--SSSE 285
            P+ E+ P+V ++++ILYA D +    AE Q            LSPIAE SEE+  S +E
Sbjct: 238 NPDTEHLPLVGSIKRILYAADGEDVGAAETQT-----------LSPIAEGSEERRNSVTE 286

Query: 286 THKRKSISNLEFDAAGVKNLSPRQRLSDVSDVHCS-ESPLMTC 327
           + KRK I NL+ D A +  LSPRQRLSD SDV CS  SPL+TC
Sbjct: 287 SQKRKLIVNLDVDVAAITTLSPRQRLSDASDVKCSGSSPLLTC 329


>AT3G47690.1 | Symbols: ATEB1A, EB1A, ATEB1H2 | microtubule end
           binding protein EB1A | chr3:17581353-17583346 FORWARD
           LENGTH=276
          Length = 276

 Score =  303 bits (776), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 145/263 (55%), Positives = 189/263 (71%), Gaps = 12/263 (4%)

Query: 1   MATNIGIMDAAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLLDVVHPGIVPMHKV 60
           MATNIG+MD+AYFVGR+EIL WIN  L LNLS+VEEA SGAV CQ+LD+  PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILTWINDRLHLNLSRVEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSG 120
           NFDAKNEYDMIQNYKVLQDVFNKLKITK +E+++LVKGRPLDNLEF+QW+KR+CDS+N G
Sbjct: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKPLEINRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 LQH-NYNPRERREVCKGGKEATRKSAHSQSSNKGSTAQRPPSSHNSRRNEXXXXXXXXXX 179
           + + NYNP ERR   + GKE + K ++    +  +    PP + +S              
Sbjct: 121 IMNENYNPVERR--SRNGKERSVKGSNKIPKSLQTNNNHPPPNSSS---------VGLSK 169

Query: 180 XXXXXXXXXXXXXXYDEQITELKLAIDSLEKEPDFYFAKLRDIEILCQIPEIENSPVVAA 239
                           +++ +LK++ D LEKE DFYF+KLRD+EILCQ PE+++ P+V A
Sbjct: 170 ASGPKSAKAAEVQALSKELVDLKISTDLLEKERDFYFSKLRDVEILCQTPELDDLPIVVA 229

Query: 240 MQKILYATDDDGTAVAEAQAMLS 262
           ++KILYATD + +A+ +AQ  L+
Sbjct: 230 VKKILYATDANESALEDAQEYLN 252


>AT5G62500.1 | Symbols: ATEB1B, ATEB1, EB1B | end binding protein 1B
           | chr5:25092929-25095006 FORWARD LENGTH=293
          Length = 293

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/264 (54%), Positives = 192/264 (72%), Gaps = 7/264 (2%)

Query: 1   MATNIGIMDAAYFVGRSEILAWINSTLQLNLSKVEEACSGAVHCQLLDVVHPGIVPMHKV 60
           MATNIG+MD+AYFVGR+EIL+WIN  L LNLS++EEA SGAV CQ+LD+  PG+VPMHKV
Sbjct: 1   MATNIGMMDSAYFVGRNEILSWINDRLHLNLSRIEEAASGAVQCQMLDMTFPGVVPMHKV 60

Query: 61  NFDAKNEYDMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSG 120
           NF+AKNEY+MIQNYKV+Q+VF KLKITK +EV++LVKGRPLDNLEF+QW+KR+CDS+N G
Sbjct: 61  NFEAKNEYEMIQNYKVMQEVFTKLKITKPLEVNRLVKGRPLDNLEFLQWLKRFCDSINGG 120

Query: 121 LQH-NYNPRERREVCKGGKEATRKSAHSQS-SNKGSTAQRPPSSHNSRRNEXXXXXXXXX 178
           + + NYNP ERR   +GG+E + K +   S S + +    PP + +   N+         
Sbjct: 121 IMNENYNPVERR--SRGGREKSVKGSSKISKSLQTNNMHHPPVATS---NKPAGPKQAKS 175

Query: 179 XXXXXXXXXXXXXXXYDEQITELKLAIDSLEKEPDFYFAKLRDIEILCQIPEIENSPVVA 238
                            +++ +LK+++D LEKE DFYF+KLRDIEILCQ PE+++ P+V 
Sbjct: 176 HGIGGGSNSSAEVQALSKEVEDLKVSVDLLEKERDFYFSKLRDIEILCQTPELDDLPIVV 235

Query: 239 AMQKILYATDDDGTAVAEAQAMLS 262
           A++KILYATD + + + EAQ  L+
Sbjct: 236 AVKKILYATDANESVLEEAQECLN 259