Miyakogusa Predicted Gene
- Lj2g3v1904510.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1904510.1 Non Chatacterized Hit- tr|I3SFC1|I3SFC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.58,0,Cyclin-like,Cyclin-like; no description,Cyclin-like;
Cyclin_N,Cyclin, N-terminal; Cyclin_C,Cyclin, C,CUFF.38053.1
(331 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67260.1 | Symbols: CYCD3;2 | CYCLIN D3;2 | chr5:26836313-268... 272 3e-73
AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 | chr3:18565322-185... 251 5e-67
AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357... 229 3e-60
AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | chr1:2... 141 7e-34
AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 | chr2:9... 134 8e-32
AT2G22490.2 | Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555... 130 2e-30
AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 121 8e-28
AT5G65420.2 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26142110-261... 117 1e-26
AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 115 4e-26
AT5G10440.1 | Symbols: CYCD4;2 | cyclin d4;2 | chr5:3280611-3282... 109 2e-24
AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 98 8e-21
AT4G37630.1 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 98 8e-21
AT4G03270.1 | Symbols: CYCD6;1 | Cyclin D6;1 | chr4:1432375-1433... 90 2e-18
AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 | chr5:41708... 85 8e-17
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167... 50 2e-06
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ... 50 3e-06
>AT5G67260.1 | Symbols: CYCD3;2 | CYCLIN D3;2 |
chr5:26836313-26837665 FORWARD LENGTH=367
Length = 367
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/315 (49%), Positives = 207/315 (65%), Gaps = 26/315 (8%)
Query: 26 LPSLPLISLDNEDDYLTTLISKEKATH---FHSPADGILASHEGHRHDAVRWISGVSAFY 82
LP L + D DD + +LISKE T+ DG L S R +A+ W+ V + Y
Sbjct: 56 LPLLDMFLWD--DDEILSLISKENETNPCFGEQILDGFLVSC---RKEALDWVLRVKSHY 110
Query: 83 GFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQVPLLLDLQQVE 142
GFT+LT +LAVNYFDRF++++K Q DKPWM+ L AV LSLAAK+EE QVPLLLDLQ VE
Sbjct: 111 GFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQ-VE 169
Query: 143 ESEFLFEAKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLGFMNGLLSEFLCRCERVL 202
E+ +LFEAKTIQRMELL+LSTL WRM+PVTPISFF ++ R G +F +CER+L
Sbjct: 170 EARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLL 229
Query: 203 LCLIVDSRVMSYPPSTLAAATMIHIIKEIEPFNATEYTDQLLDLLKISEEQVNECYKIML 262
+ +I D+R M Y PS LA A MI + +E++P + EY Q+ LLK+++E+VNECY+++L
Sbjct: 230 ISVIADTRFMRYFPSVLATAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELLL 289
Query: 263 KLLVCCGDVHNLHQKR-KRLYEPSSPGGVIDASFSCDSSNDSWTVASPLSLSV-----EP 316
+ HN +KR L + SP GV+D DSSN SW V++ S+S EP
Sbjct: 290 E--------HNPSKKRMMNLVDQDSPSGVLDFD---DSSNSSWNVSTTASVSSSSSSPEP 338
Query: 317 VFKRSKAQDQHMRLP 331
+ KR + Q+Q MRLP
Sbjct: 339 LLKRRRVQEQQMRLP 353
>AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 |
chr3:18565322-18566669 REVERSE LENGTH=361
Length = 361
Score = 251 bits (641), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 215/343 (62%), Gaps = 36/343 (10%)
Query: 10 LNILLCQEQCTFH------NNTLPSLPLISL---DNE----DDYLTTLISKEKATHFHSP 56
L+ L C+E+ FH + ++ P ++L D++ DD L+TLISK++ +
Sbjct: 17 LDGLFCEEESEFHEQVDLCDESVEKFPFLNLGLSDHDMLWDDDELSTLISKQEPCLYDEI 76
Query: 57 ADG---ILASHEGHRHDAVRWISGVSAFYGFTALTTVLAVNYFDRFVSTLKFQMDKPWMT 113
D +L R A+ WI V + YGF +LT +LAVNYFDRF+++ KFQ DKPWM+
Sbjct: 77 LDDEFLVLC-----REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMS 131
Query: 114 HLTAVTCLSLAAKMEETQVPLLLDLQQVEESEFLFEAKTIQRMELLVLSTLNWRMNPVTP 173
LTA+ CLSLAAK+EE +VP LLD Q VEE+ ++FEAKTIQRMELLVLSTL+WRM+PVTP
Sbjct: 132 QLTALACLSLAAKVEEIRVPFLLDFQ-VEEARYVFEAKTIQRMELLVLSTLDWRMHPVTP 190
Query: 174 ISFFQCVVTRLGFMNGLLSEFLCRCERVLLCLIVDSRVMSYPPSTLAAATMIHIIKEIEP 233
ISFF ++ R F + EFL RCE +LL +I DSR +S+ PS LA A M+ +I++++
Sbjct: 191 ISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKM 250
Query: 234 FNATEYTDQLLDLLKISEEQVNECYKIMLKLLVCCGDVHNLHQKR--KRLYEPSSPGGV- 290
+ Y QL+ LLK+ E+VN+CY+++L H+ +KR + +P+SP GV
Sbjct: 251 CDEAVYQSQLMTLLKVDSEKVNKCYELVLD--------HSPSKKRMMNWMQQPASPIGVF 302
Query: 291 ---IDASFSCDSSNDSWTVASPLSLSVEPVFKRSKAQDQHMRL 330
+ S +S S + + S S EP+ KR + Q+Q MRL
Sbjct: 303 DASFSSDSSNESWVVSASASVSSSPSSEPLLKRRRVQEQQMRL 345
>AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 |
chr4:16357903-16359304 FORWARD LENGTH=376
Length = 376
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 159/230 (69%), Gaps = 4/230 (1%)
Query: 37 EDDYLTTLISKEKATHFHSPADGILASHEGHRHDAVRWISGVSAFYGFTALTTVLAVNYF 96
ED+ L TL SKE+ D L++ R +AV WI V+A YGF+ L VLA+ Y
Sbjct: 59 EDEDLVTLFSKEEEQGLSCLDDVYLSTD---RKEAVGWILRVNAHYGFSTLAAVLAITYL 115
Query: 97 DRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQVPLLLDLQQVEESEFLFEAKTIQRM 156
D+F+ + Q DKPWM L +V CLSLAAK+EETQVPLLLD Q VEE++++FEAKTIQRM
Sbjct: 116 DKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQ-VEETKYVFEAKTIQRM 174
Query: 157 ELLVLSTLNWRMNPVTPISFFQCVVTRLGFMNGLLSEFLCRCERVLLCLIVDSRVMSYPP 216
ELL+LSTL W+M+ +TPISF ++ RLG N +FL +C R+LL +I DSR + Y P
Sbjct: 175 ELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLP 234
Query: 217 STLAAATMIHIIKEIEPFNATEYTDQLLDLLKISEEQVNECYKIMLKLLV 266
S +AAATM+ II++++PF+ Y LL +L +++E+V CY ++L+L V
Sbjct: 235 SVVAAATMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQLPV 284
>AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 |
chr1:26440015-26441980 FORWARD LENGTH=339
Length = 339
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 112/203 (55%), Gaps = 7/203 (3%)
Query: 68 RHDAVRWISGVSAFYGFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKM 127
R D+V WI V A+Y F LT LAVNY DRF+ + W L AV CLSLAAKM
Sbjct: 82 REDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKM 141
Query: 128 EETQVPLLLDLQQVEESEFLFEAKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLGFM 187
EE VP L D QV ++LFEAKTI+RMELLVLS L+WR+ VTP F ++
Sbjct: 142 EEILVPSLFDF-QVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPS 200
Query: 188 NGLLSEFLCRCERVLLCLIVDSRVMSYPPSTLAAATMIHIIKEIEPF----NATEYTDQL 243
L F+ ++L I ++ + Y PS++AAA ++ + E+ N E +
Sbjct: 201 GTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETW 260
Query: 244 LDLLKISEEQVNECYKIMLKLLV 266
D L S+E++ CY++M + +
Sbjct: 261 CDGL--SKEKIVRCYRLMKAMAI 281
>AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 |
chr2:9554157-9555873 REVERSE LENGTH=361
Length = 361
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 140/238 (58%), Gaps = 22/238 (9%)
Query: 68 RHDAVRWISGVSAFYGFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKM 127
R+ A+ WI V A Y F L L++NY DRF+++ + DK W L AV+CLSLA+KM
Sbjct: 97 RNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKM 156
Query: 128 EETQVPLLLDLQQVEESEFLFEAKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLGFM 187
EET VP ++DL QVE+ +F+FEAKTI+RMELLV++TLNWR+ +TP SF V ++
Sbjct: 157 EETDVPHIVDL-QVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI--- 212
Query: 188 NGLLSEFLC-RCERVLLCLIVDSRVMSYPPSTLAAATMIHIIKEIEPFNATEYTDQ---L 243
+G +SE L R R +L + + PS +AAA + + E TE D+ L
Sbjct: 213 SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGE----TECIDEEKAL 268
Query: 244 LDLLKISEEQVNECYKIMLKLLVCCGDVH----NLHQKRKRL---YEPSSPGGVIDAS 294
L+ + +E+V C +M L G+ + +L Q++ R+ P+SP GV++A+
Sbjct: 269 SSLIYVKQERVKRCLNLMRSL---TGEENVRGTSLSQEQARVAVRAVPASPVGVLEAT 323
>AT2G22490.2 | Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555873
REVERSE LENGTH=362
Length = 362
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 140/239 (58%), Gaps = 23/239 (9%)
Query: 68 RHDAVRWISGVSAFYGFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKM 127
R+ A+ WI V A Y F L L++NY DRF+++ + DK W L AV+CLSLA+KM
Sbjct: 97 RNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKM 156
Query: 128 EETQVPLLLDLQQVEESEFLFEAKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLGFM 187
EET VP ++DL QVE+ +F+FEAKTI+RMELLV++TLNWR+ +TP SF V ++
Sbjct: 157 EETDVPHIVDL-QVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI--- 212
Query: 188 NGLLSEFLC-RCERVLLCLIVDSRVMSYPPSTLAAATMIHIIKEIEPFNATEYTDQ---L 243
+G +SE L R R +L + + PS +AAA + + E TE D+ L
Sbjct: 213 SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGE----TECIDEEKAL 268
Query: 244 LDLLKIS-EEQVNECYKIMLKLLVCCGDVH----NLHQKRKRL---YEPSSPGGVIDAS 294
L+ + +E+V C +M L G+ + +L Q++ R+ P+SP GV++A+
Sbjct: 269 SSLIYVKQQERVKRCLNLMRSL---TGEENVRGTSLSQEQARVAVRAVPASPVGVLEAT 324
>AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=308
Length = 308
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 14/204 (6%)
Query: 38 DDYLTTLISKEKATHFHSPAD--------GILASHEGHRHDAVRWISGVSAFYGFTALTT 89
++ + ++ KEK H P+D G L + G R DA+ WI + F L
Sbjct: 44 EEIIMEMVEKEKQ---HLPSDDYIKRLRSGDLDLNVGRR-DALNWIWKACEVHQFGPLCF 99
Query: 90 VLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQVPLLLDLQQVEESEFLFE 149
LA+NY DRF+S K W+ L AV CLSLAAK+EET+VP+L+DL QV + +F+FE
Sbjct: 100 CLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDL-QVGDPQFVFE 158
Query: 150 AKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLGFMNGLLSE-FLCRCERVLLCLIVD 208
AK++QRMELLVL+ L WR+ +TP S+ + + ++ + S + R +V+
Sbjct: 159 AKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKG 218
Query: 209 SRVMSYPPSTLAAATMIHIIKEIE 232
+ + PS +AAA + + E++
Sbjct: 219 IDFLEFRPSEVAAAVALSVSGELQ 242
>AT5G65420.2 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26142110-26143750 REVERSE LENGTH=242
Length = 242
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 94/155 (60%), Gaps = 13/155 (8%)
Query: 38 DDYLTTLISKEKATHFHSPAD--------GILASHEGHRHDAVRWISGVSAFYGFTALTT 89
++ + ++ KEK H P+D G L + G R DA+ WI + F L
Sbjct: 44 EEIIMEMVEKEKQ---HLPSDDYIKRLRSGDLDLNVGRR-DALNWIWKACEVHQFGPLCF 99
Query: 90 VLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQVPLLLDLQQVEESEFLFE 149
LA+NY DRF+S K W+ L AV CLSLAAK+EET+VP+L+DL QV + +F+FE
Sbjct: 100 CLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDL-QVGDPQFVFE 158
Query: 150 AKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRL 184
AK++QRMELLVL+ L WR+ +TP S+ + + ++
Sbjct: 159 AKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKM 193
>AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=318
Length = 318
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 24/214 (11%)
Query: 38 DDYLTTLISKEKATHFHSPAD--------GILASHEGHRHDAVRWISGVSAF-------- 81
++ + ++ KEK H P+D G L + G R DA+ WI +
Sbjct: 44 EEIIMEMVEKEKQ---HLPSDDYIKRLRSGDLDLNVGRR-DALNWIWKIRGLCRTDREAC 99
Query: 82 --YGFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQVPLLLDLQ 139
+ F L LA+NY DRF+S K W+ L AV CLSLAAK+EET+VP+L+DL
Sbjct: 100 EVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDL- 158
Query: 140 QVEESEFLFEAKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLGFMNGLLSE-FLCRC 198
QV + +F+FEAK++QRMELLVL+ L WR+ +TP S+ + + ++ + S + R
Sbjct: 159 QVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRS 218
Query: 199 ERVLLCLIVDSRVMSYPPSTLAAATMIHIIKEIE 232
+V+ + + PS +AAA + + E++
Sbjct: 219 LQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQ 252
>AT5G10440.1 | Symbols: CYCD4;2 | cyclin d4;2 | chr5:3280611-3282342
REVERSE LENGTH=298
Length = 298
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 38 DDYLTTLISKEKATHFHSPADGILASHEGH------RHDAVRWISGVSAFYGFTALTTVL 91
++ + +I KE+ HSP D L R A+ WI F L L
Sbjct: 36 EEIVREMIEKERQ---HSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICL 92
Query: 92 AVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQVPLLLDLQQVEESEFLFEAK 151
A+NY DRF+S K W L AV CLSLAAK+EET VP L+ L QV F+FEAK
Sbjct: 93 AMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQL-QVGAPMFVFEAK 151
Query: 152 TIQRMELLVLSTLNWRMNPVTPISFFQCVVTRL-GFMNGLLSEFLCRCERVLLCLIVDSR 210
++QRMELLVL+ L WR+ VTP S+ + ++++ G+ S + R +V+
Sbjct: 152 SVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGID 211
Query: 211 VMSYPPSTLAAATMIHIIKE 230
+ + S +AAA + + E
Sbjct: 212 FLEFRASEIAAAVALSVSGE 231
>AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=321
Length = 321
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
Query: 36 NEDDYLTTLISKEKATHFHSPADGILASHEGHRHDAVRWISGVSAFYGFTALTTVLAVNY 95
+++DY+ L+ KE P+ +S R A+ WI +GF T +A++Y
Sbjct: 43 DDEDYVADLVLKENLRFETLPSKTTSSSD---RLIAIDWILTTRTRFGFQHQTAYIAISY 99
Query: 96 FDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQVPLLLDLQQVEESEFLFEAKTIQR 155
FD F+ D+ W L +V CLSLAAKMEE VP L Q ++ +F+F+ I++
Sbjct: 100 FDLFLHKRFIGKDETWAMRLLSVACLSLAAKMEERIVPGL--SQYPQDHDFVFKPDVIRK 157
Query: 156 MELLVLSTLNWRMNPVTPISFFQCVVTRLGFMNGLLSE--FLCRCERVLLCLIVDSRVMS 213
ELL+LSTL+W+MN +TP +F + ++ N +S+ L R LL L +
Sbjct: 158 TELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTE 217
Query: 214 YPPSTLAA 221
Y +AA
Sbjct: 218 YRQFVVAA 225
>AT4G37630.1 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=323
Length = 323
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 36 NEDDYLTTLISKEKATHFHSPADGILASHEGHRHDAVRWISGVSAFYGFTALTTVLAVNY 95
+++DY+ L+ KE P+ +S R A+ WI +GF T +A++Y
Sbjct: 43 DDEDYVADLVLKENLRFETLPSKTTSSSD---RLIAIDWILTTRTRFGFQHQTAYIAISY 99
Query: 96 FDRFVST--LKFQMDKPWMTHLTAVTCLSLAAKMEETQVPLLLDLQQVEESEFLFEAKTI 153
FD F+ + Q D+ W L +V CLSLAAKMEE VP L Q ++ +F+F+ I
Sbjct: 100 FDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLS--QYPQDHDFVFKPDVI 157
Query: 154 QRMELLVLSTLNWRMNPVTPISFFQCVVTRLGFMNGLLSE--FLCRCERVLLCLIVDSRV 211
++ ELL+LSTL+W+MN +TP +F + ++ N +S+ L R LL L +
Sbjct: 158 RKTELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISF 217
Query: 212 MSYPPSTLAA 221
Y +AA
Sbjct: 218 TEYRQFVVAA 227
>AT4G03270.1 | Symbols: CYCD6;1 | Cyclin D6;1 | chr4:1432375-1433691
REVERSE LENGTH=302
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 119/247 (48%), Gaps = 18/247 (7%)
Query: 66 GHRHDAVRWISGVSAFYGFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAA 125
+R+ A+ I+ S + +LT LAVNY DRF+S+ KPW+ L +++C+SL+A
Sbjct: 56 SNRNQAISSITQYSRKFDDPSLT-YLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSA 114
Query: 126 KMEETQVPLLLDLQQVEESEFLFEAKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLG 185
KM + + + DL E EF F+A+ I+RME ++L L WRM VTP SF ++
Sbjct: 115 KMRKPDMS-VSDLPV--EGEF-FDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFE 170
Query: 186 FMNG----LLSEFLCRCERVLLCLIVDSRVMSYPPSTLAAATMIHIIKEIEPFNATEYTD 241
L + + L D + + PS +A A ++ E+ P +++
Sbjct: 171 LKEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSN 230
Query: 242 QLLDLLKISEEQVNECYKIMLKLLVCCGDVHNLHQKRKRLYEPSSPGGVIDASFSCDSSN 301
++ ++++++ ECYK + + + G+ + V+D FS S+
Sbjct: 231 RINQCTYVNKDELMECYKAIQERDIIVGENEG---------STETAVNVLDQQFSSCESD 281
Query: 302 DSWTVAS 308
S T+ +
Sbjct: 282 KSITITA 288
>AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 |
chr5:417087-418553 FORWARD LENGTH=341
Length = 341
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 67 HRHDAVRWISGVSAFYGFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAK 126
+R A +W+ + + T A N FDRFV WM L AVT LS+A+K
Sbjct: 77 YRFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASK 136
Query: 127 MEETQVPLLLDLQQVEESEFLFEAKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTRLGF 186
E PLL +L+ + +F T+ +MEL++L L WR+N VT +F Q +V+++G
Sbjct: 137 FNEVTTPLLEELEMEGLTH-MFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGM 195
Query: 187 MNGLLSEFLCRCERVLLCLIVDSRVMSYPPSTLAAATM 224
+ + + R LL +I D +++ YPPS +A A +
Sbjct: 196 VGDHM--IMNRITNHLLDVICDLKMLQYPPSVVATAAI 231
>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
chr1:16775035-16777182 REVERSE LENGTH=460
Length = 460
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 12/172 (6%)
Query: 72 VRWISGVSAFYGFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQ 131
V W+ VS Y T L VNY DR++S K L V C+ +AAK EE
Sbjct: 232 VDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQK---LQLLGVACMMIAAKYEEIC 288
Query: 132 VPLLLDLQQVEESEFLFEAKTIQRMELLVLSTLNWRMN-PVTPISFFQCVVTRLGFMNGL 190
P + + + ++ +L + + ME VL+ L + M P T + V G
Sbjct: 289 APQVEEFCYITDNTYLKD--EVLDMESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAP 346
Query: 191 LSEFLCRCERVLLCLIVDSRVMSYPPSTLAAATMIHIIKEI-----EPFNAT 237
L + C + +++ ++S+ PS L AA+ I + K I P+N+T
Sbjct: 347 LMQLECMANYIAELSLLEYTMLSHSPS-LVAASAIFLAKYILDPTRRPWNST 397
>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
chr1:29081904-29084137 REVERSE LENGTH=442
Length = 442
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 26/179 (14%)
Query: 72 VRWISGVSAFYGFTALTTVLAVNYFDRFVSTLKFQMDKPWMTHLTAVTCLSLAAKMEETQ 131
+ W+ V+ Y + T LAVNY DR+++ L VTC+ +AAK EE
Sbjct: 216 IDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNAINKQN---LQLLGVTCMMIAAKYEEVC 272
Query: 132 VPLLLDLQQVEESEFLFEAKTIQRMELLVLSTLNWRMNPVTPISFFQCVVTR-LGFMNG- 189
VP + D + ++ +L + ME VL+ L + + TP + +C + R L G
Sbjct: 273 VPQVEDFCYITDNTYL--RNELLEMESSVLNYLKFEL--TTPTA--KCFLRRFLRAAQGR 326
Query: 190 -----LLSEFLCRCERVLLCLIVDSRVMSYPPSTLAAATM------IHIIKEIEPFNAT 237
LLSE L C L L+ D ++ Y PS +AA+ + +H + +P+NAT
Sbjct: 327 KEVPSLLSECLA-CYLTELSLL-DYAMLRYAPSLVAASAVFLAQYTLHPSR--KPWNAT 381