Miyakogusa Predicted Gene

Lj2g3v1903410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1903410.1 tr|A9RNM6|A9RNM6_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,34.38,1e-17,BETA-1,3-GLUCURONYLTRANSFERASE,NULL;
GALACTOSYLGALACTOSYLXYLOSYLPROTEIN
3-BETA-GLUCURONOSYLTRANSFERA,CUFF.38048.1
         (243 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G67230.1 | Symbols: IRX14-L, I14H | Nucleotide-diphospho-suga...   270   9e-73
AT4G36890.1 | Symbols: IRX14 | Nucleotide-diphospho-sugar transf...   261   3e-70
AT1G27600.2 | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar ...    57   1e-08
AT1G27600.1 | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar ...    57   1e-08

>AT5G67230.1 | Symbols: IRX14-L, I14H | Nucleotide-diphospho-sugar
           transferases superfamily protein |
           chr5:26822506-26824181 FORWARD LENGTH=492
          Length = 492

 Score =  270 bits (689), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 132/205 (64%), Positives = 156/205 (76%), Gaps = 11/205 (5%)

Query: 1   MFADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXXXX-------LIPVQ 53
           MFADDSNMHSMELFDEIQ VKW GA+SVGIL H                       +P+Q
Sbjct: 250 MFADDSNMHSMELFDEIQTVKWFGALSVGILAHSGNADELSSILKNEQGKNKEKPSMPIQ 309

Query: 54  GPACNATDKLVGWHTFNSLRYTGRSAVYIDDRAPVLPRKLEWSGFVLNSRLLWKD-LDDR 112
           GP+CN+++KLVGWH FN+  Y  ++AVYID++APV+P K+EWSGFVLNSRLLWK+ LDD+
Sbjct: 310 GPSCNSSEKLVGWHIFNTQPYAKKTAVYIDEKAPVMPSKMEWSGFVLNSRLLWKESLDDK 369

Query: 113 PEWIKDLDAVDEG---IESPLSLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPARWI 169
           P W+KDL  +D+G   IESPLSLVK  S VEPLG+CGR+VLLWWLRVEAR DSKFP  WI
Sbjct: 370 PAWVKDLSLLDDGYAEIESPLSLVKDPSMVEPLGSCGRRVLLWWLRVEARADSKFPPGWI 429

Query: 170 IDPPLDITVPSKRTPWPDAPPELPS 194
           I  PL+ITVPSKRTPWPD+  ELP+
Sbjct: 430 IKSPLEITVPSKRTPWPDSSSELPA 454


>AT4G36890.1 | Symbols: IRX14 | Nucleotide-diphospho-sugar
           transferases superfamily protein |
           chr4:17379631-17381627 REVERSE LENGTH=525
          Length = 525

 Score =  261 bits (667), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 127/196 (64%), Positives = 148/196 (75%), Gaps = 13/196 (6%)

Query: 1   MFADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXXXXL----------- 49
           MFADDSNMHSMELFDEIQ VKW G VSVGIL H                           
Sbjct: 258 MFADDSNMHSMELFDEIQNVKWFGTVSVGILAHSGNAEEMVLSMEKRKEMEKEEEEESSS 317

Query: 50  IPVQGPACNATDKLVGWHTFNSLRYTGRSAVYIDDRAPVLPRKLEWSGFVLNSRLLWKDL 109
           +PVQGPACN+TD+L+GWH FN+L Y G+SAVYIDD A VLP+KLEWSGFVLNSRLLW++ 
Sbjct: 318 LPVQGPACNSTDQLIGWHIFNTLPYAGKSAVYIDDVAAVLPQKLEWSGFVLNSRLLWEEA 377

Query: 110 DDRPEWIKDLDAVDE--GIESPLSLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPAR 167
           +++PEW+KD  +++E  G+ESPLSL+K  S VEPLG+CGRQVLLWWLRVEAR DSKFP  
Sbjct: 378 ENKPEWVKDFGSLNENEGVESPLSLLKDPSMVEPLGSCGRQVLLWWLRVEARADSKFPPG 437

Query: 168 WIIDPPLDITVPSKRT 183
           WIIDPPL+ITV +KRT
Sbjct: 438 WIIDPPLEITVAAKRT 453


>AT1G27600.2 | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar
           transferases superfamily protein | chr1:9604083-9605881
           REVERSE LENGTH=394
          Length = 394

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 43/191 (22%)

Query: 2   FADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXXXXLIPVQGPACNATD 61
           FADD N++S+ELF  ++++   G   V +L                    ++GP CN + 
Sbjct: 236 FADDDNIYSLELFQSLRQISRFGTWPVAMLAQSKNKAI------------LEGPVCNGS- 282

Query: 62  KLVGWHTFNSLRYTGRSAVYIDDRAPVLPR-KLEWSGFVLNSRLLWKDLDDRPEW----- 115
           +++GWHT              ++++  L R  ++ SGF  NS +LW    D   W     
Sbjct: 283 QVIGWHT--------------NEKSKRLRRFHVDMSGFAFNSTILW----DPKRWRRPFS 324

Query: 116 --IKDLDAVDEGIESPL---SLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPARWII 170
              + LD V EG +       +V   S +E +      +L W L ++A  D  +P  W I
Sbjct: 325 HPTRQLDTVKEGFQETSFIEQVVADESEMEGVPPACSSILNWHLHLDA-LDVPYPQGWAI 383

Query: 171 DPPLDITVPSK 181
              L   +  K
Sbjct: 384 QKNLQALITMK 394


>AT1G27600.1 | Symbols: IRX9-L, I9H | Nucleotide-diphospho-sugar
           transferases superfamily protein | chr1:9604083-9605881
           REVERSE LENGTH=394
          Length = 394

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 43/191 (22%)

Query: 2   FADDSNMHSMELFDEIQRVKWIGAVSVGILLHXXXXXXXXXXXXXXXLIPVQGPACNATD 61
           FADD N++S+ELF  ++++   G   V +L                    ++GP CN + 
Sbjct: 236 FADDDNIYSLELFQSLRQISRFGTWPVAMLAQSKNKAI------------LEGPVCNGS- 282

Query: 62  KLVGWHTFNSLRYTGRSAVYIDDRAPVLPR-KLEWSGFVLNSRLLWKDLDDRPEW----- 115
           +++GWHT              ++++  L R  ++ SGF  NS +LW    D   W     
Sbjct: 283 QVIGWHT--------------NEKSKRLRRFHVDMSGFAFNSTILW----DPKRWRRPFS 324

Query: 116 --IKDLDAVDEGIESPL---SLVKSTSAVEPLGNCGRQVLLWWLRVEARTDSKFPARWII 170
              + LD V EG +       +V   S +E +      +L W L ++A  D  +P  W I
Sbjct: 325 HPTRQLDTVKEGFQETSFIEQVVADESEMEGVPPACSSILNWHLHLDA-LDVPYPQGWAI 383

Query: 171 DPPLDITVPSK 181
              L   +  K
Sbjct: 384 QKNLQALITMK 394