Miyakogusa Predicted Gene

Lj2g3v1892030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1892030.1 Non Chatacterized Hit- tr|G7JK05|G7JK05_MEDTR CBS
domain-containing protein, putative OS=Medicago
tr,65.71,7e-19,CBS-domain,NULL; INOSINE-5-MONOPHOSPHATE DEHYDROGENASE
RELATED,NULL; CBS,Cystathionine beta-synthase,CUFF.38035.1
         (156 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36910.1 | Symbols: LEJ2, CDCP2 | Cystathionine beta-synthase...   257   2e-69
AT4G34120.1 | Symbols: LEJ1, CDCP1 | Cystathionine beta-synthase...   241   1e-64

>AT4G36910.1 | Symbols: LEJ2, CDCP2 | Cystathionine beta-synthase
           (CBS) family protein | chr4:17391016-17393218 REVERSE
           LENGTH=236
          Length = 236

 Score =  257 bits (657), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 122/151 (80%), Positives = 141/151 (93%)

Query: 1   MTKREDLHVVKPTTTVDEALEMLVEHRVTGFPVIDDKWNLVGVVSDYDLLALDSISGNGR 60
           MTK+EDLHVVKPTTTVDEALE+LVE+R+TGFPVID+ W LVG+VSDYDLLALDSISG+GR
Sbjct: 81  MTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSISGSGR 140

Query: 61  KESSMFPEVDSSWKTFNEVQNLLSKTNGKVIGELMTTAPMVVRENTNLEDAARLLLETKF 120
            E+SMFPEVDS+WKTFN VQ LLSKTNGK++G+LMT AP+VV E TNLEDAA++LLETK+
Sbjct: 141 TENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKY 200

Query: 121 RRLPVVDFEGRLVGIITRGNVVGAALQIKRA 151
           RRLPVVD +G+LVGIITRGNVV AALQIKR+
Sbjct: 201 RRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231


>AT4G34120.1 | Symbols: LEJ1, CDCP1 | Cystathionine beta-synthase
           (CBS) family protein | chr4:16341194-16342893 FORWARD
           LENGTH=238
          Length = 238

 Score =  241 bits (616), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 112/154 (72%), Positives = 139/154 (90%)

Query: 1   MTKREDLHVVKPTTTVDEALEMLVEHRVTGFPVIDDKWNLVGVVSDYDLLALDSISGNGR 60
           MT R++LHVVKP+T+VD+ALE+LVE +VTG PVIDD W LVGVVSDYDLLALDSISG  +
Sbjct: 83  MTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQ 142

Query: 61  KESSMFPEVDSSWKTFNEVQNLLSKTNGKVIGELMTTAPMVVRENTNLEDAARLLLETKF 120
            ++++FP+VDS+WKTFNE+Q L+SKT GKV+G+LMT +P+VVR++TNLEDAARLLLETKF
Sbjct: 143 NDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKF 202

Query: 121 RRLPVVDFEGRLVGIITRGNVVGAALQIKRAIQN 154
           RRLPVVD +G+L+GI+TRGNVV AALQIKR  +N
Sbjct: 203 RRLPVVDADGKLIGILTRGNVVRAALQIKRETEN 236