Miyakogusa Predicted Gene

Lj2g3v1890900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1890900.1 Non Chatacterized Hit- tr|I1ND50|I1ND50_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57895
PE,62.12,0,HTH_MYB,Myb domain; SANT  SWI3, ADA2, N-CoR and TFIIIB''
DNA-bin,SANT/Myb domain; Myb_DNA-binding,SA,CUFF.38017.1
         (174 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08520.1 | Symbols:  | Duplicated homeodomain-like superfamil...   202   8e-53
AT1G49010.1 | Symbols:  | Duplicated homeodomain-like superfamil...   180   5e-46
AT5G58900.1 | Symbols:  | Homeodomain-like transcriptional regul...   175   1e-44
AT2G38090.1 | Symbols:  | Duplicated homeodomain-like superfamil...   174   2e-44
AT5G23650.1 | Symbols:  | Homeodomain-like transcriptional regul...   172   1e-43
AT3G11280.2 | Symbols:  | Duplicated homeodomain-like superfamil...   169   7e-43
AT3G11280.1 | Symbols:  | Duplicated homeodomain-like superfamil...   169   7e-43
AT5G05790.1 | Symbols:  | Duplicated homeodomain-like superfamil...   167   2e-42
AT5G04760.1 | Symbols:  | Duplicated homeodomain-like superfamil...   161   2e-40
AT5G01200.1 | Symbols:  | Duplicated homeodomain-like superfamil...   150   4e-37
AT3G10580.1 | Symbols:  | Homeodomain-like superfamily protein |...   128   2e-30
AT3G10580.2 | Symbols:  | Homeodomain-like superfamily protein |...   127   3e-30
AT4G09450.1 | Symbols:  | Duplicated homeodomain-like superfamil...   125   1e-29
AT5G47390.1 | Symbols:  | myb-like transcription factor family p...   111   3e-25
AT5G61620.1 | Symbols:  | myb-like transcription factor family p...   109   1e-24
AT1G70000.2 | Symbols:  | myb-like transcription factor family p...   102   1e-22
AT1G70000.1 | Symbols:  | myb-like transcription factor family p...   102   1e-22
AT5G56840.1 | Symbols:  | myb-like transcription factor family p...   100   7e-22
AT1G74840.1 | Symbols:  | Homeodomain-like superfamily protein |...    94   6e-20
AT1G74840.2 | Symbols:  | Homeodomain-like superfamily protein |...    94   7e-20
AT3G16350.1 | Symbols:  | Homeodomain-like superfamily protein |...    93   1e-19
AT1G19000.2 | Symbols:  | Homeodomain-like superfamily protein |...    91   3e-19
AT1G19000.1 | Symbols:  | Homeodomain-like superfamily protein |...    91   3e-19
AT3G10590.1 | Symbols:  | Duplicated homeodomain-like superfamil...    89   1e-18
AT1G75250.2 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:2824...    83   1e-16
AT1G75250.1 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 | chr1:2824...    82   2e-16
AT3G10585.1 | Symbols:  | Homeodomain-like superfamily protein |...    80   6e-16
AT4G39250.1 | Symbols: ATRL1, RSM2, RL1 | RAD-like 1 | chr4:1827...    75   3e-14
AT1G19510.1 | Symbols: ATRL5, RSM4, RL5 | RAD-like 5 | chr1:6756...    74   3e-14
AT3G10595.1 | Symbols:  | Duplicated homeodomain-like superfamil...    68   3e-12
AT2G21650.1 | Symbols: MEE3, ATRL2, RSM1 | Homeodomain-like supe...    68   3e-12
AT2G18328.1 | Symbols: ATRL4, RL4 | RAD-like 4 | chr2:7964478-79...    67   5e-12
AT3G09600.2 | Symbols:  | Homeodomain-like superfamily protein |...    57   9e-09
AT3G09600.1 | Symbols:  | Homeodomain-like superfamily protein |...    56   1e-08
AT1G01060.4 | Symbols: LHY, LHY1 | Homeodomain-like superfamily ...    54   6e-08
AT1G01060.3 | Symbols: LHY, LHY1 | Homeodomain-like superfamily ...    54   6e-08
AT1G01060.2 | Symbols: LHY, LHY1 | Homeodomain-like superfamily ...    54   6e-08
AT1G01060.1 | Symbols: LHY, LHY1 | Homeodomain-like superfamily ...    54   6e-08
AT1G18330.1 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily...    52   2e-07
AT3G10113.1 | Symbols:  | Homeodomain-like superfamily protein |...    52   2e-07
AT1G18330.2 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily...    52   3e-07
AT5G02840.2 | Symbols: LCL1 | LHY/CCA1-like 1 | chr5:648794-6512...    51   3e-07
AT5G02840.1 | Symbols: LCL1 | LHY/CCA1-like 1 | chr5:648794-6512...    51   3e-07
AT5G02840.3 | Symbols: LCL1 | LHY/CCA1-like 1 | chr5:648794-6512...    51   4e-07
AT1G01520.1 | Symbols:  | Homeodomain-like superfamily protein |...    51   4e-07
AT2G46830.1 | Symbols: CCA1 | circadian clock associated 1 | chr...    50   6e-07
AT5G52660.1 | Symbols:  | Homeodomain-like superfamily protein |...    50   7e-07
AT4G36570.1 | Symbols: ATRL3, RL3 | RAD-like 3 | chr4:17254660-1...    50   7e-07
AT5G52660.2 | Symbols:  | Homeodomain-like superfamily protein |...    50   8e-07
AT5G37260.1 | Symbols: RVE2, CIR1 | Homeodomain-like superfamily...    50   8e-07
AT5G17300.1 | Symbols: RVE1 | Homeodomain-like superfamily prote...    50   9e-07
AT4G01280.2 | Symbols:  | Homeodomain-like superfamily protein |...    49   1e-06
AT4G01280.1 | Symbols:  | Homeodomain-like superfamily protein |...    49   1e-06
AT3G11450.1 | Symbols:  | DnaJ domain ;Myb-like DNA-binding doma...    48   3e-06

>AT5G08520.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:2755470-2757741 REVERSE LENGTH=298
          Length = 298

 Score =  202 bits (514), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 107/190 (56%), Positives = 132/190 (69%), Gaps = 23/190 (12%)

Query: 4   WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVPP 63
           WSRE + AFE A+A+  ++   RWEKIAA VPGK+++++K HY +L++DV  IESG VP 
Sbjct: 12  WSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPL 71

Query: 64  PDYDS--------------FSQGSKSHASRSD-------NQERRKGTPWTEDEHKQFLLG 102
           P Y S                +G  SHA  S+       +QERRKG  WTEDEH+ FLLG
Sbjct: 72  PAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLG 131

Query: 103 LEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRLNSTS-NKKRSSIHDITIDNNEGTS 161
           L+K+GKGDWRSISR+FVVTRT TQVASHAQKYF+RLNS + +++RSSIHDIT   N   S
Sbjct: 132 LDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGNADVS 191

Query: 162 AAPQGPITGQ 171
             PQGPITGQ
Sbjct: 192 -TPQGPITGQ 200


>AT1G49010.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr1:18132714-18133778 FORWARD LENGTH=314
          Length = 314

 Score =  180 bits (456), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/204 (49%), Positives = 126/204 (61%), Gaps = 42/204 (20%)

Query: 1   MAEWSREQEKAFENAIASYAEDDPY---RWEKIAAAVPGKAIKEVKHHYLILLDDVLNIE 57
           +A WSRE+EKAFENAIA +  ++     +W K+++ VP KA++EVK HY ILL+DV  IE
Sbjct: 5   VATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIE 64

Query: 58  SGLVPPPDY---------------------DSFSQGSKSHASRSD--------------- 81
           +G VP P Y                     DS S GS                       
Sbjct: 65  NGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGS 124

Query: 82  --NQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRLN 139
              QERRKG PWTE+EH+ FLLGL+KFGKGDWRSISR+FV++RT TQVASHAQKYF+RLN
Sbjct: 125 RAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLN 184

Query: 140 STS-NKKRSSIHDITIDNNEGTSA 162
           S + +++RSSIHDIT  NN+  + 
Sbjct: 185 SMNRDRRRSSIHDITTVNNQAPAV 208


>AT5G58900.1 | Symbols:  | Homeodomain-like transcriptional
           regulator | chr5:23783275-23784667 REVERSE LENGTH=288
          Length = 288

 Score =  175 bits (443), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 118/180 (65%), Gaps = 23/180 (12%)

Query: 2   AEWSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLV 61
           A W+  + KAFENA+A Y ++ P RW+K+AA +PGK + +V   Y  L  DV +IE+GL+
Sbjct: 32  ATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLI 91

Query: 62  PPPDY-----------------DSFSQG-----SKSHASRSDNQERRKGTPWTEDEHKQF 99
           P P Y                 + F  G      +S A RS   ER+KG PWTE+EHK F
Sbjct: 92  PVPGYITSPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLF 151

Query: 100 LLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLR-LNSTSNKKRSSIHDITIDNNE 158
           L+GL+K+GKGDWR+ISR+FV+TRT TQVASHAQKYF+R L+   +K+R+SIHDIT  N E
Sbjct: 152 LMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLE 211


>AT2G38090.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr2:15945278-15946775 FORWARD LENGTH=298
          Length = 298

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/182 (48%), Positives = 119/182 (65%), Gaps = 28/182 (15%)

Query: 3   EWSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVP 62
           +W+ E+ K FENA+A Y +D P RW ++AA +PGK + +V   Y  L +DV +IE+GL+P
Sbjct: 28  KWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAGLIP 87

Query: 63  PPDY--DSFS-------------------------QGSKSHASRSDNQERRKGTPWTEDE 95
            P Y  DSF+                          G +  A+R+   ER+KG PWTE+E
Sbjct: 88  IPGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAAGGKRGSAARTAEHERKKGVPWTEEE 147

Query: 96  HKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLR-LNSTSNKKRSSIHDITI 154
           H+QFL+GL+K+GKGDWR+I+R+FV TRT TQVASHAQKYF+R +N   +K+RSSIHDIT 
Sbjct: 148 HRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRSSIHDITT 207

Query: 155 DN 156
            N
Sbjct: 208 VN 209


>AT5G23650.1 | Symbols:  | Homeodomain-like transcriptional
           regulator | chr5:7969812-7971019 FORWARD LENGTH=337
          Length = 337

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/194 (50%), Positives = 117/194 (60%), Gaps = 24/194 (12%)

Query: 2   AEWSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLV 61
           + WS++ + AFE A+A Y +    RW+KIA  VPGK +++V  HY IL  DV+ IESG V
Sbjct: 11  SSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLIESGCV 70

Query: 62  PPPDYDSFSQG----------------------SKSHASRSDNQERRKGTPWTEDEHKQF 99
             PDYD F +                       SK        Q+RR+G PW   EH+QF
Sbjct: 71  RLPDYDDFLEEPNHNAFGKERSILEGGNDRKYESKHKGKSKLKQKRRRGVPWKPFEHRQF 130

Query: 100 LLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRLNSTSNK-KRSSIHDITIDNNE 158
           L GL+K+GKGDWRSISRH VVTRT+TQVASHAQKYF  +NS   K KR SIHDITI  N+
Sbjct: 131 LHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSIHDITIAENK 190

Query: 159 GTSAAPQGPITGQK 172
             S   Q PIT QK
Sbjct: 191 SISTK-QRPITWQK 203


>AT3G11280.2 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3533477-3534393 REVERSE LENGTH=263
          Length = 263

 Score =  169 bits (429), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/163 (50%), Positives = 113/163 (69%), Gaps = 10/163 (6%)

Query: 4   WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVPP 63
           W++E+ K FE A+A YAED P RW K+A+ +PGK + +V   Y  L +DV +IE+G VP 
Sbjct: 33  WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92

Query: 64  PDY---------DSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSI 114
           P Y         D+     +   +R  +Q+R+KG PWTE+EH++FLLGL K+GKGDWR+I
Sbjct: 93  PGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNI 152

Query: 115 SRHFVVTRTATQVASHAQKYFLR-LNSTSNKKRSSIHDITIDN 156
           SR+FVV++T TQVASHAQKY+ R L+   +K+R SIHDIT  N
Sbjct: 153 SRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTGN 195


>AT3G11280.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3533477-3534393 REVERSE LENGTH=263
          Length = 263

 Score =  169 bits (429), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/163 (50%), Positives = 113/163 (69%), Gaps = 10/163 (6%)

Query: 4   WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVPP 63
           W++E+ K FE A+A YAED P RW K+A+ +PGK + +V   Y  L +DV +IE+G VP 
Sbjct: 33  WTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPI 92

Query: 64  PDY---------DSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSI 114
           P Y         D+     +   +R  +Q+R+KG PWTE+EH++FLLGL K+GKGDWR+I
Sbjct: 93  PGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNI 152

Query: 115 SRHFVVTRTATQVASHAQKYFLR-LNSTSNKKRSSIHDITIDN 156
           SR+FVV++T TQVASHAQKY+ R L+   +K+R SIHDIT  N
Sbjct: 153 SRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTGN 195


>AT5G05790.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:1740724-1741671 REVERSE LENGTH=277
          Length = 277

 Score =  167 bits (424), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/171 (49%), Positives = 114/171 (66%), Gaps = 16/171 (9%)

Query: 2   AEWSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLV 61
           + W++E+ K FE A+A YA+D P RW K+AA +PGK I +V   Y  L +D+ +IE+GLV
Sbjct: 29  SSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLV 88

Query: 62  PPPDYDSFSQGS---------------KSHASRSDNQERRKGTPWTEDEHKQFLLGLEKF 106
           P P Y S +                    + +R  +Q+RRKG PWTE+EH++FLLGL K+
Sbjct: 89  PIPGYRSVTPCGFDQVVSPRDFDAYRKLPNGARGFDQDRRKGVPWTEEEHRRFLLGLLKY 148

Query: 107 GKGDWRSISRHFVVTRTATQVASHAQKYFLR-LNSTSNKKRSSIHDITIDN 156
           GKGDWR+ISR+FV ++T TQVASHAQKY+ R L+   +K+R SIHDIT  N
Sbjct: 149 GKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITTVN 199


>AT5G04760.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:1373752-1374529 REVERSE LENGTH=215
          Length = 215

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 11/162 (6%)

Query: 2   AEWSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLV 61
           ++W+R ++K FE A+  + E  P RWE+IA  +  K+  EV+ HY +L+ DV  I+SG V
Sbjct: 4   SQWTRSEDKMFEQALVLFPEGSPNRWERIADQL-HKSAGEVREHYEVLVHDVFEIDSGRV 62

Query: 62  PPPDYDSFSQGSK---------SHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWR 112
             PDY   S  +          S  S+    ER++GTPWTE+EHK FL+GL+++GKGDWR
Sbjct: 63  DVPDYMDDSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWR 122

Query: 113 SISRHFVVTRTATQVASHAQKYFLRLNSTSN-KKRSSIHDIT 153
           SISR+ VVTRT TQVASHAQKYFLR NS    +KRSSIHDIT
Sbjct: 123 SISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDIT 164


>AT5G01200.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr5:77116-78294 FORWARD LENGTH=267
          Length = 267

 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/187 (45%), Positives = 109/187 (58%), Gaps = 32/187 (17%)

Query: 2   AEWSREQEKAFENAIASYAEDDPYR-WEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGL 60
           A W+ E+ K FE A+A   + D    W KIA  +PGK + +V   Y  L DDV +IE+GL
Sbjct: 28  ATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAGL 87

Query: 61  VPPPDY-----------------------DSFSQGSKSHASRSD-------NQERRKGTP 90
           +P P Y                       D    G +S  + +D        +ER+KG P
Sbjct: 88  IPIPGYGGDASSAANSDYFFGLENSSYGYDYVVGGKRSSPAMTDCFRSPMPEKERKKGVP 147

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLR-LNSTSNKKRSSI 149
           WTEDEH +FL+GL+K+GKGDWR+I++ FV TRT TQVASHAQKYFLR L    +K+RSSI
Sbjct: 148 WTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDKRRSSI 207

Query: 150 HDITIDN 156
           HDIT  N
Sbjct: 208 HDITTVN 214


>AT3G10580.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3307083-3308230 REVERSE LENGTH=287
          Length = 287

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 98/162 (60%), Gaps = 5/162 (3%)

Query: 4   WSREQEKAFENAIASY-AEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVP 62
           W R+ +K FE A+  + AE  P   E IA  +  K +KEV  +Y  L+DDV  IESG  P
Sbjct: 8   WKRDDDKRFELALVRFPAEGSPDFLENIAQFL-QKPLKEVYSYYQALVDDVTLIESGKYP 66

Query: 63  PPDY--DSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVV 120
            P Y  D +    ++  S++    ++KG PW+ +EH+ FL GL K+GKGDW+SISR  V 
Sbjct: 67  LPKYPEDDYVSLPEATKSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVT 126

Query: 121 TRTATQVASHAQKYFLRLNSTSNKKRSSIHDITIDNNEGTSA 162
           +R+  QVASHAQKYFLR       KR SIHD+T+ + E  + 
Sbjct: 127 SRSPMQVASHAQKYFLR-QKNKKGKRFSIHDMTLGDAENVTV 167


>AT3G10580.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3307083-3308230 REVERSE LENGTH=256
          Length = 256

 Score =  127 bits (320), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 98/162 (60%), Gaps = 5/162 (3%)

Query: 4   WSREQEKAFENAIASY-AEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVP 62
           W R+ +K FE A+  + AE  P   E IA  +  K +KEV  +Y  L+DDV  IESG  P
Sbjct: 8   WKRDDDKRFELALVRFPAEGSPDFLENIAQFL-QKPLKEVYSYYQALVDDVTLIESGKYP 66

Query: 63  PPDY--DSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVV 120
            P Y  D +    ++  S++    ++KG PW+ +EH+ FL GL K+GKGDW+SISR  V 
Sbjct: 67  LPKYPEDDYVSLPEATKSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVT 126

Query: 121 TRTATQVASHAQKYFLRLNSTSNKKRSSIHDITIDNNEGTSA 162
           +R+  QVASHAQKYFLR       KR SIHD+T+ + E  + 
Sbjct: 127 SRSPMQVASHAQKYFLR-QKNKKGKRFSIHDMTLGDAENVTV 167


>AT4G09450.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr4:5983277-5984500 FORWARD LENGTH=200
          Length = 200

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 94/155 (60%), Gaps = 2/155 (1%)

Query: 1   MAEWSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGL 60
             +W+R  +K FE A+    E  P   E IA  +  K +KEV+++Y  L+ D+  IESG 
Sbjct: 4   FPQWTRVDDKRFELALLQIPEGSPNFIENIAYYL-QKPVKEVEYYYCALVHDIERIESGK 62

Query: 61  VPPPDYDSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVV 120
              P Y        + A  S    ++ G PW+E+E + FL GL KFGKGDW++ISR+ V 
Sbjct: 63  YVLPKYPEDDYVKLTEAGESKGNGKKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYCVK 122

Query: 121 TRTATQVASHAQKYFLRL-NSTSNKKRSSIHDITI 154
           +RT+TQVASHAQKYF R    ++N KR SIHD+T+
Sbjct: 123 SRTSTQVASHAQKYFARQKQESTNTKRPSIHDMTL 157


>AT5G47390.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:19227001-19228546 FORWARD LENGTH=365
          Length = 365

 Score =  111 bits (277), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 51/80 (63%), Positives = 65/80 (81%), Gaps = 1/80 (1%)

Query: 77  ASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFL 136
           A  S ++ER+KGTPWTE+EH+ FLLGL+K GKGDWR ISR++V TRT TQVASHAQKYF+
Sbjct: 84  AGSSSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFI 143

Query: 137 RLNSTS-NKKRSSIHDITID 155
           R ++ S  K+RSS+ D+  D
Sbjct: 144 RQSNVSRRKRRSSLFDMVPD 163


>AT5G61620.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:24772383-24773507 FORWARD LENGTH=317
          Length = 317

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 71/102 (69%), Gaps = 10/102 (9%)

Query: 83  QERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRLN-ST 141
            E++KG PWTE+EH+ FL+GL K GKGDWR I++ FV TRT TQVASHAQKYF+RLN + 
Sbjct: 102 HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVND 161

Query: 142 SNKKRSSIHDITIDNNE---------GTSAAPQGPITGQKNP 174
             K+R+S+ DI++++ +          T   P+ PITG + P
Sbjct: 162 KRKRRASLFDISLEDQKEKERNSQDASTKTPPKQPITGIQQP 203


>AT1G70000.2 | Symbols:  | myb-like transcription factor family
           protein | chr1:26363674-26364635 REVERSE LENGTH=261
          Length = 261

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 2/100 (2%)

Query: 63  PPDYDSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTR 122
           P D   ++     HAS   N+ER++GTPWTE+EH+ FL GL K GKGDWR ISR+FV TR
Sbjct: 73  PTDDGGYASDDVVHAS-GRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTR 131

Query: 123 TATQVASHAQKYFL-RLNSTSNKKRSSIHDITIDNNEGTS 161
           T TQVASHAQKYFL R N    ++RSS+ DIT D+  G+S
Sbjct: 132 TPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSS 171


>AT1G70000.1 | Symbols:  | myb-like transcription factor family
           protein | chr1:26363674-26364635 REVERSE LENGTH=261
          Length = 261

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 2/100 (2%)

Query: 63  PPDYDSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTR 122
           P D   ++     HAS   N+ER++GTPWTE+EH+ FL GL K GKGDWR ISR+FV TR
Sbjct: 73  PTDDGGYASDDVVHAS-GRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTR 131

Query: 123 TATQVASHAQKYFL-RLNSTSNKKRSSIHDITIDNNEGTS 161
           T TQVASHAQKYFL R N    ++RSS+ DIT D+  G+S
Sbjct: 132 TPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSS 171


>AT5G56840.1 | Symbols:  | myb-like transcription factor family
           protein | chr5:22980789-22982152 FORWARD LENGTH=233
          Length = 233

 Score =  100 bits (248), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 60/76 (78%), Gaps = 2/76 (2%)

Query: 84  ERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRLNSTSN 143
           +R+KG PWT +EH+ FL+GLEK GKGDWR ISR+FVVT++ TQVASHAQKYFLR  +T +
Sbjct: 86  DRKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLH 145

Query: 144 --KKRSSIHDITIDNN 157
             ++R+S+ D+    N
Sbjct: 146 HKRRRTSLFDMVSAGN 161


>AT1G74840.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:28116201-28117317 REVERSE LENGTH=265
          Length = 265

 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 47/52 (90%)

Query: 84  ERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYF 135
           ER++G PWTE+EHK FLLGL++ GKGDW+ ISR+FV TRT+TQVASHAQKYF
Sbjct: 91  ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYF 142


>AT1G74840.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:28116201-28117317 REVERSE LENGTH=239
          Length = 239

 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 39/52 (75%), Positives = 47/52 (90%)

Query: 84  ERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYF 135
           ER++G PWTE+EHK FLLGL++ GKGDW+ ISR+FV TRT+TQVASHAQKYF
Sbjct: 91  ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYF 142


>AT3G16350.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:5547828-5549397 FORWARD LENGTH=387
          Length = 387

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 53/64 (82%), Gaps = 2/64 (3%)

Query: 75  SHASRSDNQ--ERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQ 132
           +H S S ++  ER++G PWTE+EH+ FL+GL+K GKGDWR ISR++V +RT TQVASHAQ
Sbjct: 121 AHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQ 180

Query: 133 KYFL 136
           KYF+
Sbjct: 181 KYFI 184


>AT1G19000.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:6561335-6562684 REVERSE LENGTH=285
          Length = 285

 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 53/69 (76%)

Query: 67  DSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQ 126
           D ++  + +    S +  R++G PWTE+EHK+FL+GL+K GKGDW+ ISR+FV +RT TQ
Sbjct: 80  DGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQ 139

Query: 127 VASHAQKYF 135
           VASHAQKYF
Sbjct: 140 VASHAQKYF 148


>AT1G19000.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:6561335-6562684 REVERSE LENGTH=285
          Length = 285

 Score = 91.3 bits (225), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 53/69 (76%)

Query: 67  DSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQ 126
           D ++  + +    S +  R++G PWTE+EHK+FL+GL+K GKGDW+ ISR+FV +RT TQ
Sbjct: 80  DGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQ 139

Query: 127 VASHAQKYF 135
           VASHAQKYF
Sbjct: 140 VASHAQKYF 148


>AT3G10590.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3310424-3311311 REVERSE LENGTH=206
          Length = 206

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 39/197 (19%)

Query: 4   WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVL------NIE 57
           W+ +  + F++A++ +  D+  R   +A  +P K ++EVK++Y  L++DV       N+ 
Sbjct: 7   WTEDDNRRFKSALSQFPPDN-KRLVNVAQHLP-KPLEEVKYYYEKLVNDVYLPKPLENVT 64

Query: 58  SGLVPP--------------------PDYDSFSQGSKSHASRSDNQERRKGTPWTEDEHK 97
             L  P                    P+Y   ++ S+S   + D        PWTE+EH+
Sbjct: 65  QHLQKPMEMEEMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDT-----PNPWTEEEHR 119

Query: 98  QFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRLNSTSNKKRSSIHDITIDNN 157
            FL GL+K+G+G     S +FV T+T  QV+SHAQ Y  + +    +KR SI DIT+++ 
Sbjct: 120 LFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQYYKRQKSDNKKEKRRSIFDITLEST 179

Query: 158 EGTSAAPQGPITGQKNP 174
           EG       P +G +NP
Sbjct: 180 EG------NPDSGNQNP 190


>AT1G75250.2 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 |
          chr1:28244463-28245453 REVERSE LENGTH=97
          Length = 97

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 52/75 (69%)

Query: 1  MAEWSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGL 60
          ++ W+  Q K FE A+A Y +D P RW  +A AV GK ++EVK HY IL++D++NIE+G 
Sbjct: 9  ISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGR 68

Query: 61 VPPPDYDSFSQGSKS 75
          VP P+Y +F   S+S
Sbjct: 69 VPLPNYKTFESNSRS 83


>AT1G75250.1 | Symbols: ATRL6, RSM3, RL6 | RAD-like 6 |
          chr1:28245073-28245453 REVERSE LENGTH=126
          Length = 126

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 52/75 (69%)

Query: 1  MAEWSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGL 60
          ++ W+  Q K FE A+A Y +D P RW  +A AV GK ++EVK HY IL++D++NIE+G 
Sbjct: 9  ISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGR 68

Query: 61 VPPPDYDSFSQGSKS 75
          VP P+Y +F   S+S
Sbjct: 69 VPLPNYKTFESNSRS 83


>AT3G10585.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3308567-3309429 REVERSE LENGTH=165
          Length = 165

 Score = 80.5 bits (197), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 86/163 (52%), Gaps = 28/163 (17%)

Query: 4   WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHY-LILLDDVLNIESGLVP 62
           W+R+ +K FE A+  + E  PY  E IA  +  K ++EVK++Y  IL+ DV+ IESG   
Sbjct: 7   WTRDNDKRFELALVIFPEGSPYFLEYIAEFL-QKPLEEVKYYYDAILVYDVVLIESGKYA 65

Query: 63  PPDYDSFSQGSKSHASRSDNQERR---KGTPWTEDEHKQFLLGLEKFGKGDWRSISRHFV 119
            P Y      S + A+ S + E     +  PWTE+EH++F+                   
Sbjct: 66  LPKYPEAYYVSLTEATESKHGETNQIPRIIPWTEEEHREFV------------------- 106

Query: 120 VTRTATQVASHAQKYFLRLNSTSNK-KRSSIHDITIDNNEGTS 161
              T+TQVASHAQKY  R    S K KR S+ DIT+++ +G S
Sbjct: 107 ---TSTQVASHAQKYDKRQKLDSKKRKRWSVLDITLESTKGKS 146


>AT4G39250.1 | Symbols: ATRL1, RSM2, RL1 | RAD-like 1 |
          chr4:18271457-18271857 REVERSE LENGTH=100
          Length = 100

 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 52/82 (63%)

Query: 4  WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVPP 63
          W+ +Q KAFE A+A+Y +D P RW+ +A  V GK  +EVK HY +L+ D+ +IE+G VP 
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73

Query: 64 PDYDSFSQGSKSHASRSDNQER 85
          P+Y +    +    S+ + + R
Sbjct: 74 PNYRTSGGCTNGRLSQEEKRMR 95


>AT1G19510.1 | Symbols: ATRL5, RSM4, RL5 | RAD-like 5 |
          chr1:6756483-6757290 REVERSE LENGTH=100
          Length = 100

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 47/71 (66%)

Query: 7  EQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVPPPDY 66
          +Q K FE A+A Y +D P RW+ +A AV  K+ +EVK HY IL++D++NIE  LVP P Y
Sbjct: 15 KQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKY 74

Query: 67 DSFSQGSKSHA 77
           +   GSKS  
Sbjct: 75 KTVDVGSKSRG 85


>AT3G10595.1 | Symbols:  | Duplicated homeodomain-like superfamily
           protein | chr3:3311905-3312815 REVERSE LENGTH=183
          Length = 183

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 91/169 (53%), Gaps = 17/169 (10%)

Query: 1   MAE--WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIES 58
           MAE  W+ E+ + F++A+  +      R+E +A  V  +++ +VK HY  L++D+L + S
Sbjct: 1   MAENSWTTEENEMFKDALVMFTAFLLTRFESVAEYVD-RSVDDVKEHYKELVNDLLEMGS 59

Query: 59  GLVPPPDYDSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSISRHF 118
             V  P+     + +K  A  S   ER   T WT++ H+ FL+GL++FGK DWR I+   
Sbjct: 60  SRVAFPN-----ELTKDMAQSSYQAER---TIWTKETHEWFLIGLDRFGK-DWRKIAV-L 109

Query: 119 VVTRTATQVASHAQKYFLRLNSTSNKKRSSIHDITIDNNEGTSAAPQGP 167
           +  ++  QV  +A+ ++       + K++ I+D+ + + +      QG 
Sbjct: 110 LDCKSPIQVEIYAENFY----QWQSSKKNVINDLNVASTDVNVMKRQGA 154


>AT2G21650.1 | Symbols: MEE3, ATRL2, RSM1 | Homeodomain-like
          superfamily protein | chr2:9259654-9260419 FORWARD
          LENGTH=101
          Length = 101

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 2/83 (2%)

Query: 4  WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVPP 63
          W+ +Q KAFE A+A Y +D P RW  +A AV GK  +E K  Y +L+ D+ +IE+G VP 
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73

Query: 64 PDYDSFSQGSKSHASRSDNQERR 86
          PDY + +    S+  R  ++E+R
Sbjct: 74 PDYKTTT--GNSNRGRLRDEEKR 94


>AT2G18328.1 | Symbols: ATRL4, RL4 | RAD-like 4 |
          chr2:7964478-7964711 FORWARD LENGTH=77
          Length = 77

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 42/59 (71%)

Query: 8  QEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGLVPPPDY 66
          ++K FE A+A + +D P RW+KIA AV GK+ +EVK HY +LL DV +IESG  P P Y
Sbjct: 15 EDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRY 73


>AT3G09600.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:2946459-2948200 FORWARD LENGTH=282
          Length = 282

 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)

Query: 55  NIESGLVPPPDYDSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSI 114
           N E+   PP   D+ ++GS     +     + + + WTE+EH +FL  L+ F + DW+ I
Sbjct: 11  NAEAPPPPPTSTDAVAEGSSKKVRKPYTITKSRES-WTEEEHDKFLEALQLFDR-DWKKI 68

Query: 115 SRHFVVTRTATQVASHAQKYFLRL 138
              FV ++T  Q+ SHAQKYFL++
Sbjct: 69  -EDFVGSKTVIQIRSHAQKYFLKV 91


>AT3G09600.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:2946459-2948270 FORWARD LENGTH=298
          Length = 298

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)

Query: 55  NIESGLVPPPDYDSFSQGSKSHASRSDNQERRKGTPWTEDEHKQFLLGLEKFGKGDWRSI 114
           N E+   PP   D+ ++GS     +     + + + WTE+EH +FL  L+ F + DW+ I
Sbjct: 11  NAEAPPPPPTSTDAVAEGSSKKVRKPYTITKSRES-WTEEEHDKFLEALQLFDR-DWKKI 68

Query: 115 SRHFVVTRTATQVASHAQKYFLRL 138
              FV ++T  Q+ SHAQKYFL++
Sbjct: 69  -EDFVGSKTVIQIRSHAQKYFLKV 91


>AT1G01060.4 | Symbols: LHY, LHY1 | Homeodomain-like superfamily
           protein | chr1:33992-37061 REVERSE LENGTH=644
          Length = 644

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTEDEH++FL  L  +G+  W+ I  H + T+TA Q+ SHAQK+F +L
Sbjct: 27  WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTKL 72


>AT1G01060.3 | Symbols: LHY, LHY1 | Homeodomain-like superfamily
           protein | chr1:33992-37061 REVERSE LENGTH=645
          Length = 645

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTEDEH++FL  L  +G+  W+ I  H + T+TA Q+ SHAQK+F +L
Sbjct: 27  WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTKL 72


>AT1G01060.2 | Symbols: LHY, LHY1 | Homeodomain-like superfamily
           protein | chr1:33992-37061 REVERSE LENGTH=645
          Length = 645

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTEDEH++FL  L  +G+  W+ I  H + T+TA Q+ SHAQK+F +L
Sbjct: 27  WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTKL 72


>AT1G01060.1 | Symbols: LHY, LHY1 | Homeodomain-like superfamily
           protein | chr1:33992-37061 REVERSE LENGTH=645
          Length = 645

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTEDEH++FL  L  +G+  W+ I  H + T+TA Q+ SHAQK+F +L
Sbjct: 27  WTEDEHERFLEALRLYGRA-WQRIEEH-IGTKTAVQIRSHAQKFFTKL 72


>AT1G18330.1 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily
           protein | chr1:6306196-6307640 REVERSE LENGTH=346
          Length = 346

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           W+E+EH +FL  ++ +G+G WR I  H + T+TA Q+ SHAQK+F ++
Sbjct: 53  WSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFFSKM 98


>AT3G10113.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:3118043-3119391 REVERSE LENGTH=336
          Length = 336

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           W+E+EH +FL  ++ +G+G WR I  H + T+TA Q+ SHAQK+F ++
Sbjct: 68  WSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFFSKM 113


>AT1G18330.2 | Symbols: EPR1, RVE7 | Homeodomain-like superfamily
           protein | chr1:6306196-6307718 REVERSE LENGTH=372
          Length = 372

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           W+E+EH +FL  ++ +G+G WR I  H + T+TA Q+ SHAQK+F ++
Sbjct: 79  WSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFFSKM 124


>AT5G02840.2 | Symbols: LCL1 | LHY/CCA1-like 1 | chr5:648794-651212
           FORWARD LENGTH=293
          Length = 293

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTE EH +FL  L+ F + DW+ I   FV ++T  Q+ SHAQKYFL++
Sbjct: 51  WTEGEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKV 96


>AT5G02840.1 | Symbols: LCL1 | LHY/CCA1-like 1 | chr5:648794-651212
           FORWARD LENGTH=293
          Length = 293

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTE EH +FL  L+ F + DW+ I   FV ++T  Q+ SHAQKYFL++
Sbjct: 51  WTEGEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKV 96


>AT5G02840.3 | Symbols: LCL1 | LHY/CCA1-like 1 | chr5:648794-651204
           FORWARD LENGTH=283
          Length = 283

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTE EH +FL  L+ F + DW+ I   FV ++T  Q+ SHAQKYFL++
Sbjct: 51  WTEGEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKV 96


>AT1G01520.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr1:190596-192139 FORWARD LENGTH=287
          Length = 287

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRLNSTSNK 144
           WTE EH +FL  L  F + DW+ I + FV ++T  Q+ SHAQKYFL++     K
Sbjct: 64  WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKVQKNGTK 115


>AT2G46830.1 | Symbols: CCA1 | circadian clock associated 1 |
           chr2:19246005-19248717 FORWARD LENGTH=608
          Length = 608

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTE+EH +F+  L  +G+  W+ I  H V T+TA Q+ SHAQK+F ++
Sbjct: 27  WTEEEHNRFIEALRLYGRA-WQKIEEH-VATKTAVQIRSHAQKFFSKV 72


>AT5G52660.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr5:21359423-21362037 REVERSE LENGTH=330
          Length = 330

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTE EH +FL  L+ F + DW+ I   F+ ++T  Q+ SHAQKYFL++
Sbjct: 75  WTEPEHDKFLEALQLFDR-DWKKI-EAFIGSKTVIQIRSHAQKYFLKV 120


>AT4G36570.1 | Symbols: ATRL3, RL3 | RAD-like 3 |
          chr4:17254660-17254836 FORWARD LENGTH=58
          Length = 58

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 31/43 (72%)

Query: 4  WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHY 46
          W+R++ K FE A+A+Y +D P RW  +A AV GK+ +EV+ HY
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHY 54


>AT5G52660.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr5:21359423-21362037 REVERSE LENGTH=331
          Length = 331

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTE EH +FL  L+ F + DW+ I   F+ ++T  Q+ SHAQKYFL++
Sbjct: 75  WTEPEHDKFLEALQLFDR-DWKKI-EAFIGSKTVIQIRSHAQKYFLKV 120


>AT5G37260.1 | Symbols: RVE2, CIR1 | Homeodomain-like superfamily
           protein | chr5:14751344-14752972 REVERSE LENGTH=287
          Length = 287

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WTE EH++F+  L+ +G+  WR I  H V T+TA Q+ SHAQK+F ++
Sbjct: 39  WTEAEHEKFVEALKLYGRA-WRRIEEH-VGTKTAVQIRSHAQKFFTKV 84


>AT5G17300.1 | Symbols: RVE1 | Homeodomain-like superfamily protein
           | chr5:5690435-5692435 REVERSE LENGTH=387
          Length = 387

 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WT++EHK+F+  L+ +G+  WR I  H V ++TA Q+ SHAQK+F ++
Sbjct: 58  WTDEEHKKFVEALKLYGRA-WRRIEEH-VGSKTAVQIRSHAQKFFSKV 103


>AT4G01280.2 | Symbols:  | Homeodomain-like superfamily protein |
           chr4:535288-536854 FORWARD LENGTH=303
          Length = 303

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WT+ EH +FL  L  F + DW+ I   FV ++T  Q+ SHAQKYFL++
Sbjct: 62  WTDQEHDKFLEALHLFDR-DWKKI-EAFVGSKTVVQIRSHAQKYFLKV 107


>AT4G01280.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr4:535288-536854 FORWARD LENGTH=302
          Length = 302

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 2/48 (4%)

Query: 91  WTEDEHKQFLLGLEKFGKGDWRSISRHFVVTRTATQVASHAQKYFLRL 138
           WT+ EH +FL  L  F + DW+ I   FV ++T  Q+ SHAQKYFL++
Sbjct: 62  WTDQEHDKFLEALHLFDR-DWKKI-EAFVGSKTVVQIRSHAQKYFLKV 107


>AT3G11450.1 | Symbols:  | DnaJ domain ;Myb-like DNA-binding domain
           | chr3:3605459-3607402 REVERSE LENGTH=647
          Length = 647

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query: 4   WSREQEKAFENAIASYAEDDPYRWEKIAAAVPGKAIKEVKHHYLILLDDVLNIESGL 60
           WS  QE+A   A+ ++ ++   RWE++AAAVPGK + + K  +  L + + N ++G+
Sbjct: 591 WSTVQERALVQALKTFPKETSQRWERVAAAVPGKTMNQCKKKFAELKEIIRNKKTGV 647