Miyakogusa Predicted Gene

Lj2g3v1837140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1837140.1 tr|B9HHI3|B9HHI3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_562994 PE=4
SV=1,49.41,0,seg,NULL; DUF3651,Protein of unknown function DUF3651,
TMEM131; SUBFAMILY NOT NAMED,NULL; RW1 PROTEI,CUFF.37968.1
         (1266 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66820.1 | Symbols:  | unknown protein; Has 35333 Blast hits ...    91   5e-18

>AT5G66820.1 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr5:26689097-26691110 FORWARD LENGTH=519
          Length = 519

 Score = 90.9 bits (224), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 87/175 (49%), Gaps = 42/175 (24%)

Query: 768 SGSALIRNNLSGVEWIPLRGFGGLLSLVFLEGSEQVQSVDFDLKMHKPLNFSLPYALLHM 827
           S SALIR NLSGV W+ L+                V  ++F     +P          H+
Sbjct: 120 SSSALIRKNLSGVVWLSLK---------------PVHIIEF-----QPFT-----GFFHI 154

Query: 828 KEMTSACSQPLVKELYAKNTGDLPLEVKSIRVSGRECGLDGFKILN-CWGFALEPGESTK 886
            +    C +P+ KELY K T        SI VSG++CG +GF + + C GF+LEPG+S K
Sbjct: 155 GD---TCYEPMSKELYTKKT----TRELSITVSGKQCGGNGFMVNHPCEGFSLEPGDSIK 207

Query: 887 LLISYQTDFSAAVVHRDLELSLQTGIFLLPMKASFPHDMLCNCKKSMFWMRVKKY 941
            L  YQ++ S A             +F +PMKA+ P  ML   KK +FW+R KK+
Sbjct: 208 FLFFYQSELSWAS---------GVAVFAVPMKATAPVLMLSLYKKPVFWVRTKKF 253