Miyakogusa Predicted Gene
- Lj2g3v1828880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1828880.1 Non Chatacterized Hit- tr|I1J924|I1J924_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39166
PE,74.83,0,zf-4CXXC_R1,Zinc-finger domain of monoamine-oxidase A
repressor R1; seg,NULL; SUBFAMILY NOT NAMED,NU,CUFF.37902.1
(304 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G23530.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 313 9e-86
AT4G37110.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 291 4e-79
AT1G67780.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 107 8e-24
AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 107 1e-23
AT5G38690.1 | Symbols: | Zinc-finger domain of monoamine-oxidas... 91 9e-19
AT1G09060.3 | Symbols: | Zinc finger, RING-type;Transcription f... 60 2e-09
AT1G09060.2 | Symbols: | Zinc finger, RING-type;Transcription f... 60 3e-09
AT1G09060.1 | Symbols: | Zinc finger, RING-type;Transcription f... 60 3e-09
>AT2G23530.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 | chr2:10020652-10022804 REVERSE LENGTH=552
Length = 552
Score = 313 bits (802), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 159/275 (57%), Positives = 188/275 (68%), Gaps = 16/275 (5%)
Query: 27 ISQYELCREQRIRENRERMGKLGIFDLSLKLK--THNXXXXXXXXXXXANKTPPSLHPSG 84
+S YE CRE+RI+EN +RM LG+ +LS KLK T N TPP L PS
Sbjct: 28 VSLYEQCREERIKENLQRMNNLGLLNLSRKLKPKTRPVKRSYGNRNSVQNPTPP-LQPS- 85
Query: 85 PTRRSSRLQNVAPVSYSEAPPKKXXXXXXXXXXXX-XGSKPEVYTEEHEKLLGNTERTWT 143
RRSSRL+N PV Y++ +K G + E+YTEEHEKLLGNTER+WT
Sbjct: 86 --RRSSRLENTTPVIYTDGINEKGKKASKRESVVIGEGIRAEIYTEEHEKLLGNTERSWT 143
Query: 144 LFVDGYGKDGKRIYDSFQGKTCHQCRQKTLGYRTCCCKCNMVQGQFCGDCLYMRYGEHVL 203
FVDGY K+GKRIYD F GKTCHQCRQKT+G+RT C +CN+VQGQFCGDCL+MRYGEHVL
Sbjct: 144 CFVDGYDKNGKRIYDPFNGKTCHQCRQKTMGHRTQCSECNLVQGQFCGDCLFMRYGEHVL 203
Query: 204 EALENPDWICPPCRGICNCSLCRQAKGWAPTGMLYKKISNLGYKSVAHYLVQTRRAEIIE 263
EALENPDWICP CRGICNCSLCR KGW PTG +Y++I+ LGYKSVAHYL+QT+RA
Sbjct: 204 EALENPDWICPACRGICNCSLCRNNKGWVPTGPIYRRIAALGYKSVAHYLIQTKRAPT-- 261
Query: 264 VDKDADASNPVSAKRSLPFSDVTKSHEVNDLDLPL 298
D + SAKRSL F + D D+P+
Sbjct: 262 ---DDTTPSQASAKRSLSFQEKI----AGDEDVPM 289
>AT4G37110.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 | chr4:17484343-17486197 REVERSE LENGTH=417
Length = 417
Score = 291 bits (745), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/299 (52%), Positives = 181/299 (60%), Gaps = 18/299 (6%)
Query: 18 PSSNHDHHTISQYELCREQRIRENRERMGKLGIFDLSLKLKTHNXXXXXXXXXXXAN--- 74
P+ + +S YE CRE RI+EN +RM LGI DLSLKLK+ AN
Sbjct: 19 PTVGGGNSNVSIYEKCREDRIKENLQRMKNLGIMDLSLKLKSEIRPAKRRYGNSNANPGR 78
Query: 75 KTPP-----------SLHPSGP-TRRSSRLQNVAPVSYSEAPPKKXXXXXXXXXX--XXX 120
+T P L P +RRSSRL+N PVSY+E P K
Sbjct: 79 ETSPIQLSVSSRRSSRLKQEPPVSRRSSRLKNATPVSYAEEPELKKGKVSKEEIVLWVGE 138
Query: 121 GSKPEVYTEEHEKLLGNTERTWTLFVDGYGKDGKRIYDSFQGKTCHQCRQKTLGYRTCCC 180
G +PE+YTEEHEKLLGNTERTW LFVDG K+GKRIYD +GK CHQCRQKTLGY T C
Sbjct: 139 GVRPEIYTEEHEKLLGNTERTWELFVDGCDKNGKRIYDPVRGKCCHQCRQKTLGYHTQCS 198
Query: 181 KCN-MVQGQFCGDCLYMRYGEHVLEALENPDWICPPCRGICNCSLCRQAKGWAPTGMLYK 239
+CN V+GQFCGDCLYMRYGEHVLEALENPDWICP CR ICNCS CR KGW PTG Y+
Sbjct: 199 QCNHSVRGQFCGDCLYMRYGEHVLEALENPDWICPVCRDICNCSFCRTKKGWLPTGAAYR 258
Query: 240 KISNLGYKSVAHYLVQTRRAEIIEVDKDADASNPVSAKRSLPFSDVTKSHEVNDLDLPL 298
KI LGYKSVAHYL+QT + D + DA A +T + N +D L
Sbjct: 259 KIHKLGYKSVAHYLIQTNQQSETSEDDETDAPADSQASEGDHLLLITDGIQDNQIDENL 317
>AT1G67780.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 protein | chr1:25412816-25415530 FORWARD
LENGTH=512
Length = 512
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 62/109 (56%), Gaps = 13/109 (11%)
Query: 153 GKRIYDSFQGKTCHQCRQKTLGYRTCC--------CKCNMVQGQFCGDCLYMRYGEHVLE 204
G RIYDS GKTCHQCRQKT+ + C C N FC CL RYGE+ E
Sbjct: 23 GGRIYDSSNGKTCHQCRQKTMDFVASCKAMKKDKQCTIN-----FCHKCLINRYGENAEE 77
Query: 205 ALENPDWICPPCRGICNCSLCRQAKGWAPTGMLYKKISNLGYKSVAHYL 253
+ DWICP CRGICNCS CR+ +G PTG+L K G SV+ L
Sbjct: 78 VAKLDDWICPQCRGICNCSFCRKKRGLNPTGILAHKAKASGLASVSMLL 126
>AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 protein | chr1:25183177-25185793 REVERSE
LENGTH=541
Length = 541
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 153 GKRIYDSFQGKTCHQCRQKTLGYRTCCCKC---NMVQGQFCGDCLYMRYGEHVLEALENP 209
GKRIYDS GK+CHQCRQKTL + C + +FC CL +RYGE+ E +
Sbjct: 15 GKRIYDSQNGKSCHQCRQKTLDFAAPCKAMRRKKLCPIKFCYKCLSIRYGENAEEVAKLD 74
Query: 210 DWICPPCRGICNCSLCRQAKGWAPTGMLYKKISNLGYKSVAHYL 253
DWICP CRGIC CS+CR+A+G PTG+L + GY SV L
Sbjct: 75 DWICPLCRGICICSVCRKAQGLEPTGILAHEAKARGYSSVYALL 118
>AT5G38690.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A
repressor R1 protein | chr5:15479424-15482992 REVERSE
LENGTH=572
Length = 572
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 155 RIYDSFQGKTCHQCRQKTLGYRTCCC---KCNMVQGQFCGDCLYMRYGEHVLEALENPDW 211
RI DS GKTCHQCRQK C K + C C+ RYGE+ E DW
Sbjct: 22 RIEDSTNGKTCHQCRQKRTDLVGSCVTKKKDKTCPIKLCTKCILNRYGENAQEVALKKDW 81
Query: 212 ICPPCRGICNCSLCRQAKGWAPTGMLYKKISNLGYKSVAHYL 253
ICP CRG CNCS C + +G PTG+L G+ SV+ L
Sbjct: 82 ICPKCRGNCNCSYCMKKRGQKPTGILVHTAKKTGFSSVSELL 123
>AT1G09060.3 | Symbols: | Zinc finger, RING-type;Transcription
factor jumonji/aspartyl beta-hydroxylase |
chr1:2921235-2925254 REVERSE LENGTH=944
Length = 944
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 162 GKTCHQCRQKTLGYRTCCCKCNMVQGQFCGDCLYMRYGEHVLEALENPDWICPPCRGICN 221
G+ CHQC++K C KCN Q FC +CL RY E LE +E +CP CRG+C+
Sbjct: 217 GEICHQCQRKDRERIISCLKCN--QRAFCHNCLSARYSEISLEEVEK---VCPACRGLCD 271
Query: 222 CSLC 225
C C
Sbjct: 272 CKSC 275
>AT1G09060.2 | Symbols: | Zinc finger, RING-type;Transcription
factor jumonji/aspartyl beta-hydroxylase |
chr1:2921235-2925212 REVERSE LENGTH=930
Length = 930
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 162 GKTCHQCRQKTLGYRTCCCKCNMVQGQFCGDCLYMRYGEHVLEALENPDWICPPCRGICN 221
G+ CHQC++K C KCN Q FC +CL RY E LE +E +CP CRG+C+
Sbjct: 203 GEICHQCQRKDRERIISCLKCN--QRAFCHNCLSARYSEISLEEVEK---VCPACRGLCD 257
Query: 222 CSLC 225
C C
Sbjct: 258 CKSC 261
>AT1G09060.1 | Symbols: | Zinc finger, RING-type;Transcription
factor jumonji/aspartyl beta-hydroxylase |
chr1:2921235-2925212 REVERSE LENGTH=930
Length = 930
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 162 GKTCHQCRQKTLGYRTCCCKCNMVQGQFCGDCLYMRYGEHVLEALENPDWICPPCRGICN 221
G+ CHQC++K C KCN Q FC +CL RY E LE +E +CP CRG+C+
Sbjct: 203 GEICHQCQRKDRERIISCLKCN--QRAFCHNCLSARYSEISLEEVEK---VCPACRGLCD 257
Query: 222 CSLC 225
C C
Sbjct: 258 CKSC 261