Miyakogusa Predicted Gene
- Lj2g3v1828810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1828810.1 Non Chatacterized Hit- tr|I3SDD0|I3SDD0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,96.28,0,THIOREDOXIN_2,Thioredoxin-like fold;
Thioredoxin-like,Thioredoxin-like fold;
Thioredoxin,Thioredoxin,CUFF.37896.1
(263 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37200.1 | Symbols: HCF164 | Thioredoxin superfamily protein ... 323 8e-89
AT1G50320.1 | Symbols: ATHX, ATX, THX | thioredoxin X | chr1:186... 56 2e-08
AT4G03520.1 | Symbols: ATHM2 | Thioredoxin superfamily protein |... 55 6e-08
AT3G15360.1 | Symbols: ATHM4, TRX-M4, ATM4 | thioredoxin M-type ... 53 2e-07
AT1G43560.1 | Symbols: Aty2, ty2 | thioredoxin Y2 | chr1:1639835... 51 7e-07
AT2G15570.2 | Symbols: ATHM3, ATM3, TRX-M3, GAT1 | Thioredoxin s... 51 8e-07
AT2G15570.1 | Symbols: ATHM3, ATM3, TRX-M3, GAT1 | Thioredoxin s... 51 9e-07
AT2G47470.1 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | ... 51 1e-06
AT2G47470.4 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | ... 50 1e-06
AT1G21750.2 | Symbols: ATPDIL1-1, PDIL1-1 | PDI-like 1-1 | chr1:... 50 1e-06
AT1G21750.1 | Symbols: ATPDIL1-1, ATPDI5, PDI5, PDIL1-1 | PDI-li... 50 1e-06
AT2G47470.3 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | ... 50 1e-06
AT2G47470.2 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 | ... 50 2e-06
AT1G76760.1 | Symbols: ATY1, TRX-Y1, TY1 | thioredoxin Y1 | chr1... 49 2e-06
AT1G77510.1 | Symbols: ATPDIL1-2, PDI6, ATPDI6, PDIL1-2 | PDI-li... 48 8e-06
>AT4G37200.1 | Symbols: HCF164 | Thioredoxin superfamily protein |
chr4:17509836-17511230 REVERSE LENGTH=261
Length = 261
Score = 323 bits (828), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 163/256 (63%), Positives = 199/256 (77%), Gaps = 25/256 (9%)
Query: 23 FTVNPRHLH--FNTR----KFHTLACQTNPNLDEKDASATSQEIKIVVEPSTVNGESETC 76
F ++PR+L F T+ +F + C+ NP ++S T QE K+V++ NGE+ +
Sbjct: 16 FNLSPRNLQSFFVTQTGAPRFRAVRCKPNP-----ESSETKQE-KLVID----NGETSSA 65
Query: 77 KPTSSTADAS---------GLPQLPTKDINRKVAIASTLAALGLFLATRLDFGVSLKDLT 127
++ + G P+ P KDINR+VA + +AAL LF++TRLDFG+SLKDLT
Sbjct: 66 SKEVESSSSVADSSSSSSSGFPESPNKDINRRVAAVTVIAALSLFVSTRLDFGISLKDLT 125
Query: 128 ANALPYEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQ 187
A+ALPYE+ALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKD+VNFVMLNVDNT WEQ
Sbjct: 126 ASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQ 185
Query: 188 ELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVDALARGEASVPHARVVGKYSS 247
ELDEFGVEGIPHFAFLD+EGNEEGNVVGRLPRQ L+ENV+ALA G+ S+P+AR VG+YSS
Sbjct: 186 ELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLVENVNALAAGKQSIPYARAVGQYSS 245
Query: 248 AEARKVHQVVDPRSHG 263
+E+RKVHQV DP SHG
Sbjct: 246 SESRKVHQVTDPLSHG 261
>AT1G50320.1 | Symbols: ATHX, ATX, THX | thioredoxin X |
chr1:18638606-18639464 REVERSE LENGTH=182
Length = 182
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 137 LSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEG 196
L + +P +VEF A WC C+ + P + + Q+Y D++ V +D+ + + EF V G
Sbjct: 84 LESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIV--KIDHDANPKLIAEFKVYG 141
Query: 197 IPHFAFLDKEGNE--EGNVVGRLPRQLLLENVDAL 229
+PHF L K+G E G + + L E +D L
Sbjct: 142 LPHF-ILFKDGKEVPGSRREGAITKAKLKEYIDGL 175
>AT4G03520.1 | Symbols: ATHM2 | Thioredoxin superfamily protein |
chr4:1562585-1564055 REVERSE LENGTH=186
Length = 186
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 142 PTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEGIPHFA 201
P VV+F+A WC C+ + P V + Q Y ++ F LN D + ++GV IP
Sbjct: 100 PVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDES--PNTPGQYGVRSIPTIM 157
Query: 202 FLDKEGNEEGNVVGRLPRQLLLENVD 227
G ++ ++G +P+ L ++D
Sbjct: 158 IF-VGGEKKDTIIGAVPKTTLTSSLD 182
>AT3G15360.1 | Symbols: ATHM4, TRX-M4, ATM4 | thioredoxin M-type 4 |
chr3:5188448-5189457 FORWARD LENGTH=193
Length = 193
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 135 QALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGV 194
+ L + P +VEF+A WC CR + P V ++ + + + F +N D + + +G+
Sbjct: 99 KVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDES--PNTANRYGI 156
Query: 195 EGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
+P + K G ++ +++G +PR+ L + ++
Sbjct: 157 RSVPT-VIIFKGGEKKDSIIGAVPRETLEKTIE 188
>AT1G43560.1 | Symbols: Aty2, ty2 | thioredoxin Y2 |
chr1:16398359-16399828 REVERSE LENGTH=167
Length = 167
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 133 YEQALSNG-KPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDE 191
++ L N KP +V+FYA WC C+ + P + ++ + KD + V +D + ++
Sbjct: 68 FDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVV--KIDTEKYPSLANK 125
Query: 192 FGVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
+ +E +P F L K+G G LP L+E ++
Sbjct: 126 YQIEALPTF-ILFKDGKLWDRFEGALPANQLVERIE 160
>AT2G15570.2 | Symbols: ATHM3, ATM3, TRX-M3, GAT1 | Thioredoxin
superfamily protein | chr2:6791556-6792902 REVERSE
LENGTH=174
Length = 174
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
+ L + P +VEFY WC CR + + +I Y ++N +LN DN E E+
Sbjct: 79 DSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAE--EYE 136
Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
++ +P L K G + +++G +P++ + ++
Sbjct: 137 IKAVP-VVLLFKNGEKRESIMGTMPKEFYISAIE 169
>AT2G15570.1 | Symbols: ATHM3, ATM3, TRX-M3, GAT1 | Thioredoxin
superfamily protein | chr2:6791556-6792902 REVERSE
LENGTH=173
Length = 173
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
+ L + P +VEFY WC CR + + +I Y ++N +LN DN E E+
Sbjct: 78 DSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAE--EYE 135
Query: 194 VEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
++ +P L K G + +++G +P++ + ++
Sbjct: 136 IKAVP-VVLLFKNGEKRESIMGTMPKEFYISAIE 168
>AT2G47470.1 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 |
thioredoxin family protein | chr2:19481503-19483683
FORWARD LENGTH=361
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
E L K +VEFYA WC C+ LAP K+ +K V+ N+D + +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212
Query: 194 VEGIPHFAFLDKE 206
V G P F K+
Sbjct: 213 VSGFPTLKFFPKD 225
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 133 YEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEF 192
+E+ + K +VEFYA WC C++LAP+ K+ +K + ++ VD + ++
Sbjct: 33 FEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKY 92
Query: 193 GVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVDALA 230
GV G P + K E G PR N +ALA
Sbjct: 93 GVSGYPTIQWFPKGSLEPQKYEG--PR-----NAEALA 123
>AT2G47470.4 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 |
thioredoxin family protein | chr2:19481503-19483683
FORWARD LENGTH=335
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
E L K +VEFYA WC C+ LAP K+ +K V+ N+D + +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212
Query: 194 VEGIPHFAFLDKE 206
V G P F K+
Sbjct: 213 VSGFPTLKFFPKD 225
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 133 YEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEF 192
+E+ + K +VEFYA WC C++LAP+ K+ +K + ++ VD + ++
Sbjct: 33 FEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKY 92
Query: 193 GVEGIPHFAFLDK 205
GV G P + K
Sbjct: 93 GVSGYPTIQWFPK 105
>AT1G21750.2 | Symbols: ATPDIL1-1, PDIL1-1 | PDI-like 1-1 |
chr1:7645767-7648695 FORWARD LENGTH=487
Length = 487
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 137 LSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEG 196
L++GK ++EFYA WC C++LAP + ++ Y+ + V+ +D T + D F V+G
Sbjct: 389 LNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKG 448
Query: 197 IPHFAFLDKEGN 208
P F GN
Sbjct: 449 FPTIYFKSASGN 460
>AT1G21750.1 | Symbols: ATPDIL1-1, ATPDI5, PDI5, PDIL1-1 | PDI-like
1-1 | chr1:7645767-7648514 FORWARD LENGTH=501
Length = 501
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 137 LSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEG 196
L++GK ++EFYA WC C++LAP + ++ Y+ + V+ +D T + D F V+G
Sbjct: 389 LNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKG 448
Query: 197 IPHFAFLDKEGN 208
P F GN
Sbjct: 449 FPTIYFKSASGN 460
>AT2G47470.3 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 |
thioredoxin family protein | chr2:19481503-19483571
FORWARD LENGTH=323
Length = 323
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
E L K +VEFYA WC C+ LAP K+ +K V+ N+D + +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212
Query: 194 VEGIPHFAFLDKE 206
V G P F K+
Sbjct: 213 VSGFPTLKFFPKD 225
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 133 YEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEF 192
+E+ + K +VEFYA WC C++LAP+ K+ +K + ++ VD + ++
Sbjct: 33 FEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKY 92
Query: 193 GVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVDALA 230
GV G P + K E G PR N +ALA
Sbjct: 93 GVSGYPTIQWFPKGSLEPQKYEG--PR-----NAEALA 123
>AT2G47470.2 | Symbols: ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11 |
thioredoxin family protein | chr2:19481503-19483303
FORWARD LENGTH=266
Length = 266
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 134 EQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFG 193
E L K +VEFYA WC C+ LAP K+ +K V+ N+D + +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212
Query: 194 VEGIPHFAFLDKE 206
V G P F K+
Sbjct: 213 VSGFPTLKFFPKD 225
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 133 YEQALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEF 192
+E+ + K +VEFYA WC C++LAP+ K+ +K + ++ VD + ++
Sbjct: 33 FEKEVGKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKY 92
Query: 193 GVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVDALAR 231
GV G P + K E G PR N +ALA
Sbjct: 93 GVSGYPTIQWFPKGSLEPQKYEG--PR-----NAEALAE 124
>AT1G76760.1 | Symbols: ATY1, TRX-Y1, TY1 | thioredoxin Y1 |
chr1:28811873-28812948 REVERSE LENGTH=172
Length = 172
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 133 YEQALSNG-KPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDE 191
+E L N KP +V++YA WC C+ + P + ++ + KD++ V +D + ++
Sbjct: 73 FEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVV--KIDTEKYPSIANK 130
Query: 192 FGVEGIPHFAFLDKEGNEEGNVVGRLPRQLLLENVD 227
+ +E +P F L K+G G L + L++ ++
Sbjct: 131 YKIEALPTF-ILFKDGEPCDRFEGALTAKQLIQRIE 165
>AT1G77510.1 | Symbols: ATPDIL1-2, PDI6, ATPDI6, PDIL1-2 | PDI-like
1-2 | chr1:29126742-29129433 FORWARD LENGTH=508
Length = 508
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 137 LSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDRVNFVMLNVDNTNWEQELDEFGVEG 196
+GK ++EFYA WC C++LAP + ++ +++ + ++ +D T + D F V+G
Sbjct: 387 FKSGKNVLIEFYAPWCGHCQKLAPILDEVALSFQNDPSVIIAKLDATANDIPSDTFDVKG 446
Query: 197 IPHFAFLDKEGN 208
P F GN
Sbjct: 447 FPTIYFRSASGN 458