Miyakogusa Predicted Gene
- Lj2g3v1828670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1828670.1 Non Chatacterized Hit- tr|I1ISN4|I1ISN4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,27.31,8e-19,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR_2,Pentatricopeptide repeat; PROKA,CUFF.37879.1
(330 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 291 5e-79
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 5e-79
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 4e-77
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 1e-76
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 282 2e-76
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 3e-76
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 4e-76
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 7e-76
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 7e-76
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 278 3e-75
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 7e-75
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 2e-74
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 270 1e-72
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 3e-72
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 3e-72
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 5e-72
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 1e-71
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 1e-71
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 1e-71
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 265 3e-71
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 263 9e-71
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 263 1e-70
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 263 1e-70
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 262 2e-70
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 262 3e-70
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 262 3e-70
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 260 7e-70
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 1e-69
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 2e-69
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 2e-69
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 2e-69
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 4e-69
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 256 1e-68
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 8e-68
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 1e-67
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 252 2e-67
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 4e-67
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 6e-67
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 9e-67
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 250 1e-66
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 3e-66
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 4e-66
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 5e-66
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 6e-66
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 8e-66
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 3e-65
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 7e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 9e-65
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 1e-64
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 3e-64
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 3e-64
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 4e-64
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 5e-64
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 6e-64
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 6e-64
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 239 1e-63
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 2e-63
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 3e-63
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 3e-63
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 3e-63
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 9e-63
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 237 9e-63
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 236 2e-62
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 3e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 5e-62
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 7e-62
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 234 9e-62
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 1e-61
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 1e-61
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 1e-61
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 1e-61
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 1e-61
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 1e-61
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 231 4e-61
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 4e-61
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 5e-61
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 1e-60
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 2e-60
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 2e-60
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 2e-60
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 3e-60
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 4e-60
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 6e-60
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 228 6e-60
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 7e-60
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 7e-60
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 1e-59
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 1e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 1e-59
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 225 3e-59
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 225 4e-59
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 224 4e-59
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 224 4e-59
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 1e-58
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 3e-58
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 5e-58
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 5e-58
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 6e-58
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 6e-58
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 220 1e-57
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 220 1e-57
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 2e-57
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 3e-57
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 3e-57
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 1e-56
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 1e-56
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 216 2e-56
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 3e-56
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 4e-56
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 5e-56
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 6e-56
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 7e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 213 1e-55
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 3e-55
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 212 3e-55
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 7e-55
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 1e-54
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 1e-54
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 209 1e-54
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 7e-54
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 3e-53
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 3e-53
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 6e-53
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 6e-53
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 7e-53
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 8e-52
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 4e-51
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 1e-50
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 1e-50
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 2e-50
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 5e-50
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 2e-49
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 7e-49
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 7e-48
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 1e-47
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 5e-47
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 184 5e-47
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 8e-47
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 8e-47
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 1e-46
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 2e-46
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 2e-46
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 3e-46
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 9e-46
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 7e-45
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 5e-44
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 5e-44
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 6e-44
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 6e-44
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 1e-43
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 2e-41
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 5e-39
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 156 2e-38
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 3e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 6e-32
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 3e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 91 9e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 86 4e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 85 5e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 1e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 78 7e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 8e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 77 2e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 75 7e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 73 2e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 72 4e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 9e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 4e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 8e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 67 1e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 3e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 65 5e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 7e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 64 2e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 2e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 61 1e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 2e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 60 3e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 59 6e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 7e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 58 7e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 6e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 5e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 291 bits (745), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 205/319 (64%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ V WN++I VQ + +A+ LF M S PD T++ LS+CS +G L +G
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H YI +++++V L SL++MYAKCG + A+ +F G+ +N +++ IIG LALH
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G AI F +M +G+ PDEITF GLLSAC H G+++ GR YF M S F ++P + H
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+ MVDLLGR G L EA L++ +PM+ DA VWGALL C+ GN+E+G++ K+LLEL
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DSG+YVLL MY E+ W+D K+ R++MN+ G++K SSIE++G +F+V DK+
Sbjct: 589 PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSR 648
Query: 302 EVSTSIYSMVDQLMDHLKS 320
S IY + L H++S
Sbjct: 649 PESEKIYDRLHCLGRHMRS 667
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 143/270 (52%), Gaps = 33/270 (12%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
PV++ VSWN +I+ + + G+ +A+ ++ M GV PD+ T++ ++SSCS +GDL GK
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 63 KAHDYICDNNITVSVTLCNSLMNM-------------------------------YAKCG 91
+ ++Y+ +N + +++ L N+LM+M YA+CG
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 92 ALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
L + +F M +K+VV WN +IG G++A+ +F++M+ S PDEIT LS
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 152 ACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDA 211
ACS G +++G + + + +S +VA +VD+ + G + EA+S+ + + ++
Sbjct: 398 ACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NS 455
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + A++G G+ ++++ G
Sbjct: 456 LTYTAIIGGLALHGDASTAISYFNEMIDAG 485
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 5/237 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV---MPDNATLVSILSSCSHMGDLALGK 62
N SWN I + E+ L+ +M G PD+ T + C+ + +LG
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
++ + + + N+ ++M+A CG ++ A +F P +++VSWN +I G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
++AI +++ M + G+ PD++T GL+S+CS G + G+ ++ + G+ +
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTIPLV 295
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G + EA + L K V W ++ G L++ +++ + E
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 291 bits (744), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 208/319 (65%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V W ++IS +V+ EA+ +F MC SG+ PD ++ S++S+C+++G L K
Sbjct: 307 KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV 366
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I N + +++ N+L+NMYAKCG L D+F MP++NVVSW+ +I AL++HG
Sbjct: 367 HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEA 426
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A+ +F +M+ + P+E+TF G+L CSHSGLVE G+ F M+ + I+P + HY C
Sbjct: 427 SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGC 486
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDL GR L EA+ +I+ +P+ + V+WG+L+ AC+ G LE+GK K++LEL
Sbjct: 487 MVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDH 546
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
G VL+SN+Y+ QRW+D++ IR++M + + K + +S I+ +G ++F++ DK H+ S
Sbjct: 547 DGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQS 606
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY+ +D+++ LK GY
Sbjct: 607 NEIYAKLDEVVSKLKLAGY 625
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 123/255 (48%), Gaps = 33/255 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ V+WN++I + + G EA +LF M S VMPD L +I+S+C G++
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN 231
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYA-------------------------------KC 90
+ ++++ +N++ + L +L+ MYA KC
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
G L A IF +K++V W +I A +EA+ +FE+M SG+ PD ++ ++
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVI 351
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
SAC++ G+++ ++ + G+ +++ ++++ + G L + +K+P + +
Sbjct: 352 SACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRDVFEKMPRR-N 409
Query: 211 AVVWGALLGACKTFG 225
V W +++ A G
Sbjct: 410 VVSWSSMINALSMHG 424
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW+S+I+ G+ ++A+ LF RM V P+ T V +L CSH G + G
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
KK + D NIT + +++++ + L+ A+++ MP NVV W ++ A
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 120 LHGSGKEAIEMFEKMRASGLFPD 142
+HG + + F R L PD
Sbjct: 525 IHGELE--LGKFAAKRILELEPD 545
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 119/274 (43%), Gaps = 18/274 (6%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSV-TLCNSL-----MNMYAKCGALQ 94
D + + IL + S + L G + H + + TLC+ M+MYA CG +
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELH------GVAFKIATLCDPFVETGFMDMYASCGRIN 163
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A ++F M ++VV+WN +I G EA ++FE+M+ S + PDE+ ++SAC
Sbjct: 164 YARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACG 223
Query: 155 HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
+G + R + + + D +V + G + A +K+ ++ + V
Sbjct: 224 RTGNMRYNRAIYEFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVS 281
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDS 274
A++ G L+ + I Q + D + + + Y ES + ++ + M S
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQ---TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338
Query: 275 GIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIY 308
GIK +S + C + DK V + I+
Sbjct: 339 GIKP-DVVSMFSVISACANLGILDKAKWVHSCIH 371
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 208/324 (64%), Gaps = 6/324 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N VSWN++I+ + Q G++ EA+ LFC + V P + + +IL +C+ + +L LG
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 62 KKAHDYICDNNITVS------VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
+AH ++ + + + NSL++MY KCG ++ +F M +++ VSWN +I
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
A +G G EA+E+F +M SG PD IT G+LSAC H+G VE GR+YF M+ FG+
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+P HY CMVDLLGR GFL EA S+I+++PM+PD+V+WG+LL ACK N+ +GK + +
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 585
Query: 236 QLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFM 295
+LLE+ +SG YVLLSNMY+E +W+D+ +RK M G+ K S I+I G + FM
Sbjct: 586 KLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645
Query: 296 VDDKNHEVSTSIYSMVDQLMDHLK 319
V DK+H I+S++D L+ ++
Sbjct: 646 VKDKSHPRKKQIHSLLDILIAEMR 669
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 109/207 (52%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ +WNS++S Q + EA+ F M G + + + S+LS+CS + D+ G
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 171
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I + V + ++L++MY+KCG + A +F M +NVVSWN +I +
Sbjct: 172 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA+++F+ M S + PDE+T ++SAC+ +++G+ G + + D+
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK 208
VD+ + + EA + +P++
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 131/275 (47%), Gaps = 38/275 (13%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNS+I+C Q G EA+++F M S V PD TL S++S+C+ + + +G++
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 65 HDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP------------------- 104
H + N+ + + L N+ ++MYAKC ++ A IF MP
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 105 ------------QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
++NVVSWN +I +G +EA+ +F ++ + P +F +L A
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 395
Query: 153 CSHSGLVEMG-RYYFGLMSSTF----GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM 207
C+ + +G + + ++ F G D+ ++D+ + G + E + +K+ M
Sbjct: 396 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-M 454
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
+ D V W A++ G ++ +++LE G
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE 489
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 51/279 (18%)
Query: 45 LVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP 104
L+ S C G L G++ D + NI NS++ K G L A +F MP
Sbjct: 61 LIDAYSKC---GSLEDGRQVFDKMPQRNIYT----WNSVVTGLTKLGFLDEADSLFRSMP 113
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
+++ +WN ++ A H +EA+ F M G +E +F +LSACS + G
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL------------------- 205
L++ + +S DV + +VD+ + G + +A + ++
Sbjct: 174 VHSLIAKSPFLS-DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 206 ---------------PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL 250
++PD V +++ AC + +++G+++ ++++ + + ++
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRND--II 290
Query: 251 LSN----MYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
LSN MY++ R +K+ R I + I+ A +S+
Sbjct: 291 LSNAFVDMYAKCSR---IKEARFIFDSMPIRNVIAETSM 326
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/326 (41%), Positives = 212/326 (65%), Gaps = 4/326 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC--VSG-VMPDNATLVSILSSCSHMGDL 58
+P ++ VSWN + SC+++ + + + LF +M V G V PD T + L +C+++G L
Sbjct: 174 IPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGAL 233
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
GK+ HD+I +N ++ ++ L N+L++MY++CG++ A +F+GM ++NVVSW +I L
Sbjct: 234 DFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGL 293
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS-TFGISP 177
A++G GKEAIE F +M G+ P+E T TGLLSACSHSGLV G +F M S F I P
Sbjct: 294 AMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKP 353
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ HY C+VDLLGR L +A SLI+ + MKPD+ +W LLGAC+ G++E+G++++ L
Sbjct: 354 NLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHL 413
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+EL ++G YVLL N YS +W+ + ++R +M + I S+IE+ G ++F+VD
Sbjct: 414 IELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVD 473
Query: 298 DKNHEVSTSIYSMVDQLMDHLKSVGY 323
D +H IY M+ ++ LK GY
Sbjct: 474 DVSHPRKEEIYKMLAEINQQLKIAGY 499
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 6/235 (2%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSI-LSSCSHMGDLALGKKAHDYIC 69
N++I E LF + + +P N S L C GDL G + H I
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ L +LM++Y+ C A +F +P+++ VSWNV+ + ++ +
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 130 MFEKMRASG---LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
+F+KM+ + PD +T L AC++ G ++ G+ + G+S + +V
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN-GLSGALNLSNTLV 259
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ R G + +A + + + + V W AL+ G + + ++L+ G
Sbjct: 260 SMYSRCGSMDKAYQVFYGMRER-NVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 207/322 (64%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN++IS + G +A+E+F M + P+ TLVS+L + S +G L LG
Sbjct: 234 MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG 293
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y D+ I + L ++L++MY+KCG ++ A+ +F +P++NV++W+ +I A+H
Sbjct: 294 EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIH 353
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +AI+ F KMR +G+ P ++ + LL+ACSH GLVE GR YF M S G+ P + H
Sbjct: 354 GQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEH 413
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLLGR G L EA I +P+KPD V+W ALLGAC+ GN+EMGK++ L+++
Sbjct: 414 YGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+DSG YV LSNMY+ W ++ ++R M + I+K S I+IDG ++F+V+D +H
Sbjct: 474 PHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSH 533
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ I SM+ ++ D L+ GY
Sbjct: 534 PKAKEINSMLVEISDKLRLAGY 555
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 50/273 (18%)
Query: 2 MPVKNAVSWNSIIS--CHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDL 58
MP +N SWN+II E + A+ LF M V P+ T S+L +C+ G +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 59 ALGKKAH-----------DYICDNNITV-------------------------------- 75
GK+ H +++ N + +
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 76 --SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEK 133
+ L N +++ Y + G + A +F M Q++VVSWN +I +L+G K+A+E+F +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 134 MRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGG 193
M+ + P+ +T +L A S G +E+G + L + GI D + ++D+ + G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 194 FLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
+ +A+ + ++LP + + + W A++ G
Sbjct: 324 IIEKAIHVFERLP-RENVITWSAMINGFAIHGQ 355
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 93 LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM---FEKMRASGLFPDEITFTGL 149
L A IF MPQ+N SWN II + K I + +E M + P+ TF +
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 150 LSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKP 209
L AC+ +G ++ G+ GL + +G D + +V + GF+ +A L K ++
Sbjct: 135 LKACAKTGKIQEGKQIHGL-ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 210 DAVV 213
D VV
Sbjct: 194 DMVV 197
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 210/330 (63%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ V+WNS+I+ + G+ EA+ L+ M G+ PD T+VS+LS+C+ +G L LG
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y+ +T ++ N L+++YA+CG ++ A +F M KN VSW +I LA++
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 122 GSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G GKEAIE+F+ M ++ GL P EITF G+L ACSH G+V+ G YF M + I P +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H+ CMVDLL R G + +A I+ +PM+P+ V+W LLGAC G+ ++ + Q+L+L
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 421
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
SG YVLLSNMY+ QRW D++KIRK M G+KK S +E+ ++F++ DK+
Sbjct: 422 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 481
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H S +IY+ + ++ L+S GY + S+V
Sbjct: 482 HPQSDAIYAKLKEMTGRLRSEGYVPQISNV 511
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 127/241 (52%), Gaps = 14/241 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKKA 64
N WN++I + + G A L+ M VSG V PD T ++ + + M D+ LG+
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + + NSL+++YA CG + +A +F MP+K++V+WN +I A +G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA+ ++ +M + G+ PD T LLSAC+ G + +G+ M G++ ++
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNLHSSNV 262
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG--ACKTFGNLEMGKQILKQLLELGR 242
++DL R G + EA +L ++ K ++V W +L+ A FG K+ +EL +
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFG---------KEAIELFK 312
Query: 243 Y 243
Y
Sbjct: 313 Y 313
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 281 bits (720), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 210/330 (63%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ V+WNS+I+ + G+ EA+ L+ M G+ PD T+VS+LS+C+ +G L LG
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y+ +T ++ N L+++YA+CG ++ A +F M KN VSW +I LA++
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 122 GSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G GKEAIE+F+ M ++ GL P EITF G+L ACSH G+V+ G YF M + I P +
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 228
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H+ CMVDLL R G + +A I+ +PM+P+ V+W LLGAC G+ ++ + Q+L+L
Sbjct: 229 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 288
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
SG YVLLSNMY+ QRW D++KIRK M G+KK S +E+ ++F++ DK+
Sbjct: 289 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 348
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H S +IY+ + ++ L+S GY + S+V
Sbjct: 349 HPQSDAIYAKLKEMTGRLRSEGYVPQISNV 378
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 103/191 (53%), Gaps = 13/191 (6%)
Query: 55 MGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVI 114
M D+ LG+ H + + + + NSL+++YA CG + +A +F MP+K++V+WN +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
I A +G +EA+ ++ +M + G+ PD T LLSAC+ G + +G+ M G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-G 119
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG--ACKTFGNLEMGKQ 232
++ ++ ++DL R G + EA +L ++ K ++V W +L+ A FG
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVGLAVNGFG------- 171
Query: 233 ILKQLLELGRY 243
K+ +EL +Y
Sbjct: 172 --KEAIELFKY 180
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 280 bits (717), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 200/322 (62%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSWN +I +++ EA+EL+ RM G PD ++ S+L +C L+LG
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
KK H YI + ++ L N+L++MYAKCG L+ A D+F M ++VVSW +I A
Sbjct: 329 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G +A+ +F K++ SGL PD I F L+ACSH+GL+E GR F LM+ + I+P + H
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
ACMVDLLGR G + EA IQ + M+P+ VWGALLGAC+ + ++G +L +L
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
SG YVLLSN+Y+++ RW+++ IR IM G+KK S++E++ + F+V D++H
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IY +D L+ +K +GY
Sbjct: 569 PQSDEIYRELDVLVKKMKELGY 590
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 6/235 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P +N + N +I +V G + E +++F MC V PD+ T +L +CS G + +G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+K H ++ ++ + N L++MY KCG L A + M +++VVSWN ++ A +
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+A+E+ +M + + D T LL A S++ + Y M G +
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--MYVKDMFFKMG-KKSLVS 276
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQI 233
+ M+ + + EA+ L ++ +PDAV ++L AC L +GK+I
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWNS++ + Q + +A+E+ M + D T+ S+L + S
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS-------- 252
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
N T +V MY K D+FF M +K++VSWNV+IG +
Sbjct: 253 ---------NTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA+E++ +M A G PD ++ T +L AC + + +G+ G + I P++
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI-PNLLL 346
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++D+ + G L +A + + + + D V W A++ A
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
D+ + H I ++ + +L LM YA + +A +F +P++NV+ NV+I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
+ +G E +++F M + PD TF +L ACS SG + +GR G ++ G+S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG-SATKVGLS 172
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ +V + G+ GFL EA ++ ++ + D V W +L+
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLV 213
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 280 bits (717), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 129/315 (40%), Positives = 207/315 (65%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P KN V+W II+ + ++G EA L +M SG+ D A ++SIL++C+ G L+LG
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG 334
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + +N+ + + N+L++MYAKCG L+ A D+F +P+K++VSWN ++ L +H
Sbjct: 335 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVH 394
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G GKEAIE+F +MR G+ PD++TF +L +C+H+GL++ G YF M + + P V H
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH 454
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLLGR G L EA+ ++Q +PM+P+ V+WGALLGAC+ +++ K++L L++L
Sbjct: 455 YGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D G Y LLSN+Y+ ++ W+ + IR M G++K SS+E++ ++F V DK+H
Sbjct: 515 PCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSH 574
Query: 302 EVSTSIYSMVDQLMD 316
S IY M+ L++
Sbjct: 575 PKSDQIYQMLGSLIE 589
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 41/297 (13%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
NS+I H Q Q +A +F M G+ DN T +L +CS L + K H++I
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 71 NNITVSVTLCNSLMNMYAKCGAL--QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
++ + + N+L++ Y++CG L + AM +F M +++ VSWN ++G L G ++A
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 129 EMFEKM----------------------RASGLF---PDE--ITFTGLLSACSHSGLVEM 161
+F++M +A LF P+ ++++ ++ S +G +EM
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 162 GRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALL 218
R F M + +V + ++ G L EA L+ ++ +K DA ++L
Sbjct: 266 ARVMFDKMPLP---AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL 322
Query: 219 GACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWDDMKKIRKIMND 273
AC G L +G +I +L+ S YVL L +MY++ ++KK + ND
Sbjct: 323 AACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMYAKC---GNLKKAFDVFND 375
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 17/244 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWNS++ V+ G+ +A LF M ++ N T++ + C M
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWN-TMLDGYARCREMS----- 233
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM--PQKNVVSWNVIIGALA 119
KA + +V+ +M Y+K G ++ A +F M P KNVV+W +II A
Sbjct: 234 -KAFELFEKMPERNTVSWSTMVMG-YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYA 291
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGISPD 178
G KEA + ++M ASGL D +L+AC+ SGL+ +G R + L S G +
Sbjct: 292 EKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAY 351
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
V + ++D+ + G L +A + +P K D V W +L G+ GK+ ++
Sbjct: 352 VLN--ALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGH---GKEAIELFS 405
Query: 239 ELGR 242
+ R
Sbjct: 406 RMRR 409
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 49 LSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV 108
L C+++ + K+ H I N+ + + L++ + C A+ +F + + NV
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 109 VSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL 168
N +I A A + +A +F +M+ GLF D T+ LL ACS + + +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 169 MSSTFGISPDVAHYACMVDLLGRGGFLG--EAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
+ G+S D+ ++D R G LG +AM L +K+ + D V W ++LG G
Sbjct: 143 IEK-LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-DTVSWNSMLGGLVKAGE 200
Query: 227 LEMGKQILKQL 237
L +++ ++
Sbjct: 201 LRDARRLFDEM 211
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 215/330 (65%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLAL 60
MP K+ V+WN++IS + Q G+ EA+ +F + + M N TLVS LS+C+ +G L L
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H YI + I ++ + ++L++MY+KCG L+ + ++F + +++V W+ +IG LA+
Sbjct: 384 GRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G EA++MF KM+ + + P+ +TFT + ACSH+GLV+ F M S +GI P+
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYAC+VD+LGR G+L +A+ I+ +P+ P VWGALLGACK NL + + +LLEL
Sbjct: 504 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 563
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G +VLLSN+Y++ +W+++ ++RK M +G+KK SSIEIDG ++F+ D
Sbjct: 564 EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 623
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H +S +Y + ++M+ LKS GY + S V
Sbjct: 624 HPMSEKVYGKLHEVMEKLKSNGYEPEISQV 653
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 129/253 (50%), Gaps = 34/253 (13%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSWNS+I+ VQ+G +A+ELF +M V + T+V +LS+C+ + +L G++
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF------------------------ 100
YI +N + V++TL N++++MY KCG+++ A +F
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 314
Query: 101 -------FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR-ASGLFPDEITFTGLLSA 152
MPQK++V+WN +I A +G EA+ +F +++ + ++IT LSA
Sbjct: 315 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 374
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAV 212
C+ G +E+GR+ + GI + + ++ + + G L ++ + + K D
Sbjct: 375 CAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVF 432
Query: 213 VWGALLGACKTFG 225
VW A++G G
Sbjct: 433 VWSAMIGGLAMHG 445
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
+P N+ +WN++I + ++ F M S P+ T ++ + + + L+L
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H + + V + NSL++ Y CG L +A +F + +K+VVSWN +I
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
GS +A+E+F+KM + + +T G+LSAC+ +E GR + ++ ++
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN-RVNVNLT 268
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
M+D+ + G + +A L + K D V W +L + E +++L +
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREVLNSM 324
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 277 bits (708), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 210/322 (65%), Gaps = 2/322 (0%)
Query: 1 MMP--VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
MMP V+N VSW +IS + + G+ +EA+E+F RM + V PD TL+++LS+C+ +G L
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
LG++ Y+ + +V+L N++++MYAK G + A+D+F + ++NVV+W II L
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL 326
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A HG G EA+ MF +M +G+ P+++TF +LSACSH G V++G+ F M S +GI P+
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ HY CM+DLLGR G L EA +I+ +P K +A +WG+LL A +LE+G++ L +L+
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELI 446
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
+L +SG Y+LL+N+YS RWD+ + +R +M G+KK SSIE++ Y+F+ D
Sbjct: 447 KLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGD 506
Query: 299 KNHEVSTSIYSMVDQLMDHLKS 320
H I+ ++ ++ ++S
Sbjct: 507 LTHPQVERIHEILQEMDLQIQS 528
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 35/256 (13%)
Query: 19 QEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVT 78
+ H+ A+ ++ ++ PD T +L + D+ G++ H + SV
Sbjct: 93 EPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVH 152
Query: 79 LCNSLMNMYAKCGALQTAMDIF-----------------FG--------------MP--Q 105
+ L+ MY CG L A +F +G MP
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 106 KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY 165
+N VSW +I A G EAIE+F++M + PDE+T +LSAC+ G +E+G
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 166 FGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
+ G++ V+ ++D+ + G + +A+ + + + + + V W ++ T G
Sbjct: 273 CSYVDHR-GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER-NVVTWTTIIAGLATHG 330
Query: 226 NLEMGKQILKQLLELG 241
+ + ++++ G
Sbjct: 331 HGAEALAMFNRMVKAG 346
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 210/329 (63%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ ++WN++IS + Q G+ EA+ +F M + GV + ++S+LS+C+ +G L G
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ AH YI N I ++V L +L+++YAKCG ++ AM++F+GM +KNV +W+ + LA++
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G++ +E+F M+ G+ P+ +TF +L CS G V+ G+ +F M + FGI P + H
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDL R G L +A+S+IQ++PMKP A VW +LL A + + NLE+G K++LEL
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELE 439
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ G YVLLSN+Y++S WD++ +R+ M G++K S +E++G ++F V DK+H
Sbjct: 440 TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSH 499
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
T I ++ + L+ GY + V
Sbjct: 500 PKYTQIDAVWKDISRRLRLAGYKADTTPV 528
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 134/330 (40%), Gaps = 70/330 (21%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSG--VMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
NS+I H + ++ + + R+ SG + PDN T+ ++ +C+ + G + H
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 69 C----DNNITVSVTL------------CNSLMNMY---------------AKCGALQTAM 97
DN+ V L C+ + N A+CG + A
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+F GMP+++ ++WN +I A G +EA+ +F M+ G+ + + +LSAC+ G
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAM------------------ 199
++ GR+ + I V +VDL + G + +AM
Sbjct: 255 ALDQGRWAHSYIERN-KIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSAL 313
Query: 200 ----------------SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
SL+++ + P+AV + ++L C G ++ G++ +
Sbjct: 314 NGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGI 373
Query: 244 DSGL--YVLLSNMYSESQRWDDMKKIRKIM 271
+ L Y L ++Y+ + R +D I + M
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 271 bits (692), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 198/329 (60%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSW ++I+ + Q G EA+ LF +M G + ++ S LS+C+ + L LG
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + N+L+ MY KCG+++ A D+F M K++VSWN +I + H
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ A+ FE M+ GL PD+ T +LSACSH+GLV+ GR YF M+ +G+ P+ H
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQH 548
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVDLLGR G L +A +L++ +P +PDA +WG LLGA + GN E+ + ++ +
Sbjct: 549 YACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 608
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+SG+YVLLSN+Y+ S RW D+ K+R M D G+KK S IEI + F V D+ H
Sbjct: 609 PENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFH 668
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
I++ +++L +K GY K S V
Sbjct: 669 PEKDEIFAFLEELDLRMKKAGYVSKTSVV 697
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
PV++ +W +++S ++Q EA ELF +M + NA L + + + K
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG----ERMEMAK 332
Query: 63 KAHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ D + C N V+ N+++ YA+CG + A ++F MP+++ VSW +I +
Sbjct: 333 ELFDVMPCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS 387
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-------------- 167
G EA+ +F +M G + +F+ LS C+ +E+G+ G
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 447
Query: 168 ----LMSSTFG------------ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MK 208
LM G D+ + M+ R GF A+ + + +K
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 507
Query: 209 PDAVVWGALLGACKTFGNLEMGKQIL 234
PD A+L AC G ++ G+Q
Sbjct: 508 PDDATMVAVLSACSHTGLVDKGRQYF 533
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 40/275 (14%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP ++ SWN+++S + Q G +A +F RM + NA L + + + L
Sbjct: 151 IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K ++ ++ N L+ + K + A F M ++VVSWN II A
Sbjct: 211 FKSRENW--------ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST-------- 172
G EA ++F++ +F T+T ++S + +VE R F M
Sbjct: 263 SGKIDEARQLFDESPVQDVF----TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAM 318
Query: 173 ----------------FGISP--DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
F + P +V+ + M+ + G + EA +L K+P K D V W
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSW 377
Query: 215 GALL-GACKTFGNLEMGKQILKQLLELGRYDSGLY 248
A++ G ++ + E + ++ E GR + +
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 31/285 (10%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++VS+N +IS +++ G+ A +LF M ++ N + ++ + LG
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKG------YVRNRNLG 143
Query: 62 KKAHDYICDNNITVSVTLC--NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
K + I +C N++++ YA+ G + A +F MP+KN VSWN ++ A
Sbjct: 144 KARELF----EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYV 199
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ +EA +F+ L +++ LL + R +F M+ DV
Sbjct: 200 QNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR-----DV 250
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ ++ + G + EA L + P++ D W A++ +E +++ ++ E
Sbjct: 251 VSWNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISS 284
R + +L+ Y + +R + K++ +M CR +S+
Sbjct: 310 --RNEVSWNAMLAG-YVQGERMEMAKELFDVM------PCRNVST 345
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 212/331 (64%), Gaps = 2/331 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ +SWN++I + + EA+ LF M SG P++ T++SIL +C+H+G + +G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 62 KKAHDYICDN--NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+ H YI +T + +L SL++MYAKCG ++ A +F + K++ SWN +I A
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+HG + ++F +MR G+ PD+ITF GLLSACSHSG++++GR+ F M+ + ++P +
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY CM+DLLG G EA +I + M+PD V+W +LL ACK GN+E+G+ + L++
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ + G YVLLSN+Y+ + RW+++ K R ++ND G+KK SSIEID ++F++ DK
Sbjct: 567 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H + IY M++++ L+ G+ S+V
Sbjct: 627 FHPRNREIYGMLEEMEVLLEKAGFVPDTSEV 657
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 150/273 (54%), Gaps = 35/273 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PVK+ VSWN++IS + + G + EA+ELF M + V PD +T+V+++S+C+ G + LG
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H +I D+ ++ + N+L+++Y+KCG L+TA +F +P K+V+SWN +IG
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF-GISPDVA 180
KEA+ +F++M SG P+++T +L AC+H G +++GR+ + G++ +
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 181 HYACMVDLLGRGG-----------------------FLGEAM-----------SLIQKLP 206
++D+ + G G AM S ++K+
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++PD + + LL AC G L++G+ I + + +
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 36/268 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N + WN++ H A++L+ M G++P++ T +L SC+ G++ H
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 66 DYI----CDNNITVSVTLCN---------------------------SLMNMYAKCGALQ 94
++ CD ++ V +L + +L+ YA G ++
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A +F +P K+VVSWN +I A G+ KEA+E+F+ M + + PDE T ++SAC+
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 155 HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
SG +E+GR L G ++ ++DL + G L A L ++LP K D + W
Sbjct: 278 QSGSIELGR-QVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISW 335
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGR 242
L+G + ++ + K+ L E+ R
Sbjct: 336 NTLIGG---YTHMNLYKEALLLFQEMLR 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 32/227 (14%)
Query: 93 LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
L A+ +F + + N++ WN + AL A++++ M + GL P+ TF +L +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 153 CSHSGLVEMGRYYFG----------------LMS------------STFGISP--DVAHY 182
C+ S + G+ G L+S F SP DV Y
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG- 241
++ G++ A L ++P+K D V W A++ GN + ++ K +++
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVK-DVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
R D V + + ++S + +++ ++D G I + ID
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 200/322 (62%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KNA+SW ++IS +VQ + EA++LF M S V PDN +L + LS+C+ +G L G
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H Y+ I + L L++MYAKCG ++ A+++F + +K+V +W +I A H
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+EAI F +M+ G+ P+ ITFT +L+ACS++GLVE G+ F M + + P + H
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLLGR G L EA IQ++P+KP+AV+WGALL AC+ N+E+G++I + L+ +
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAID 446
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
Y G YV +N+++ ++WD + R++M + G+ K S+I ++G ++F+ D++H
Sbjct: 447 PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 506
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I S + L+ GY
Sbjct: 507 PEIEKIQSKWRIMRRKLEENGY 528
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 113/290 (38%), Gaps = 66/290 (22%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN +I + ++ L+ RM S + T S+L +CS++ + H I
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 70 DNNITVSVTLCNSLMNMYA-------------------------------KCGALQTAMD 98
V NSL+N YA K G + A+
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
+F M +KN +SW +I KEA+++F +M+ S + PD ++ LSAC+ G
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL----------------- 201
+E G++ ++ T I D ++D+ + G + EA+ +
Sbjct: 263 LEQGKWIHSYLNKT-RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 202 -----------------IQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+QK+ +KP+ + + A+L AC G +E GK I
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/322 (39%), Positives = 204/322 (63%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K++V+W+S+++ +VQ + EA+ L+ R + + TL S++ +CS++ L G
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG 282
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H IC + +V + +S ++MYAKCG+L+ + IF + +KN+ WN II A H
Sbjct: 283 KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKH 342
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
KE + +FEKM+ G+ P+E+TF+ LLS C H+GLVE GR +F LM +T+G+SP+V H
Sbjct: 343 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 402
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+CMVD+LGR G L EA LI+ +P P A +WG+LL +C+ + NLE+ + ++L EL
Sbjct: 403 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELE 462
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++G +VLLSN+Y+ +++W+++ K RK++ D +KK R S I+I + F V + H
Sbjct: 463 PENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGH 522
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I S +D L+ + GY
Sbjct: 523 PRIREICSTLDNLVIKFRKFGY 544
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 127/269 (47%), Gaps = 37/269 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN++I + + +EA+++F M G T+ S+LS+C D
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
KK H I +++ + +L+++YAKCG ++ A+ +F M K+ V+W+ ++ +
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH-SGLVEMGRYYFGLMSSTFGISPDVA 180
+ +EA+ ++ + + L ++ T + ++ ACS+ + L+E + + + S FG + VA
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 181 HYACMVDLLGRGGFLGEA-------------------------------MSLIQKLP--- 206
A VD+ + G L E+ M L +K+
Sbjct: 302 SSA--VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILK 235
M P+ V + +LL C G +E G++ K
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFK 388
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 42 NATLV-SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
N LV IL C+ G + K H I ++ VTL N L+N Y+KCG ++ A +F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-HSGLV 159
GM ++++VSWN +IG + EA+++F +MR G E T + +LSAC + +
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
E + + +S I ++ ++DL + G + +A+ + + + K +V W +++
Sbjct: 180 ECKKLH--CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK-SSVTWSSMVA 236
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 268 bits (684), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 204/322 (63%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++ +SW +I +++ G E++E+F M +G++PD T+VS+L++C+H+G L +G
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ YI N I V + N+L++MY KCG + A +F M Q++ +W ++ LA +
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+EAI++F +M+ + PD+IT+ G+LSAC+HSG+V+ R +F M S I P + H
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVD+LGR G + EA +++K+PM P+++VWGALLGA + + M + K++LEL
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE 567
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ +Y LL N+Y+ +RW D++++R+ + D IKK S IE++G ++F+ DK+H
Sbjct: 568 PDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSH 627
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S IY +++L Y
Sbjct: 628 LQSEEIYMKLEELAQESTFAAY 649
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 33/267 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ SWN +IS + + ++ E++EL M + V P + TL+ +LS+CS + D L K+
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H+Y+ + S+ L N+L+N YA CG + A+ IF M ++V+SW I+ G+
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 125 K-------------------------------EAIEMFEKMRASGLFPDEITFTGLLSAC 153
K E++E+F +M+++G+ PDE T +L+AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+H G +E+G + + I DV ++D+ + G +A + + + D
Sbjct: 379 AHLGSLEIGEWIKTYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFT 436
Query: 214 WGALLGACKTFGNLEMGKQILKQLLEL 240
W A++ G + ++ Q+ ++
Sbjct: 437 WTAMVVGLANNGQGQEAIKVFFQMQDM 463
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LAL 60
+P + V WN++I + E + L+ M GV PD+ T +L+ G LA
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GKK H ++ + ++ + N+L+ MY+ CG + A +F +++V SWN++I
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+E+IE+ +M + + P +T +LSACS ++ + +S P +
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC-KTEPSLR 272
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+V+ G + A+ + + + + D + W +++ GNL++ + Q+
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLARTYFDQM 328
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 203/324 (62%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M VK+ V+WN+ ++ VQ G A A+E F +MC V D+ T+VS+LS+C +G L +G
Sbjct: 170 MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIG 229
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ +D I ++ + N+ ++M+ KCG + A +F M Q+NVVSW+ +I A++
Sbjct: 230 EEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMN 289
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM--SSTFGISPDV 179
G +EA+ +F M+ GL P+ +TF G+LSACSH+GLV G+ YF LM S+ + P
Sbjct: 290 GDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRK 349
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACMVDLLGR G L EA I+K+P++PD +WGALLGAC ++ +G+++ L+E
Sbjct: 350 EHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVE 409
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+VLLSN+Y+ + +WD + K+R M G KK A SS+E +G + F DK
Sbjct: 410 TAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDK 469
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+H S +IY +D+++ ++ +GY
Sbjct: 470 SHPQSKAIYEKLDEILKKIRKMGY 493
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN++ +V+ E++ L+ +M GV PD T ++ + S +GD + G H ++
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ L+ MY K G L +A +F M K++V+WN + G+ A+E
Sbjct: 137 KYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE 196
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMG 162
F KM A + D T +LSAC G +E+G
Sbjct: 197 YFNKMCADAVQFDSFTVVSMLSACGQLGSLEIG 229
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 10/169 (5%)
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
KK H + + +L L+ G + A +F M + + WN + +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST----FGISP 177
E++ +++KMR G+ PDE T+ ++ A S G G F L + FG
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCG---FALHAHVVKYGFGCLG 144
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
VA M+ + + G L A L + + +K D V W A L C GN
Sbjct: 145 IVATELVMMYM--KFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGN 190
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 199/327 (60%), Gaps = 7/327 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N V+W ++I+ +VQ + M +F M S V P+ TL S+LS+C+H+G L G
Sbjct: 266 MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H Y+ N+I ++ T +L+++Y KCG L+ A+ +F + +KNV +W +I A H
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAH 385
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++A ++F M +S + P+E+TF +LSAC+H GLVE GR F M F + P H
Sbjct: 386 GYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADH 445
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACMVDL GR G L EA +LI+++PM+P VVWGAL G+C + E+GK ++++L
Sbjct: 446 YACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQ 505
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV-DDKN 300
SG Y LL+N+YSESQ WD++ ++RK M D + K S IE+ G +F+ DDK
Sbjct: 506 PSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKK 565
Query: 301 HEVSTSIYSMVD------QLMDHLKSV 321
S +Y +D +L D L+ V
Sbjct: 566 PLESDDLYKTLDTVGVQMRLPDELEDV 592
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+W ++I V+ G +EAM F M +GV + T+VS+L + + D+ G+
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 226
Query: 65 HD-YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H Y+ + V + +SL++MY KC A +F MP +NVV+W +I
Sbjct: 227 HGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 286
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+ + +FE+M S + P+E T + +LSAC+H G + GR M I +
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKN-SIEINTTAGT 345
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
++DL + G L EA+ + ++L K + W A++ G
Sbjct: 346 TLIDLYVKCGCLEEAILVFERLHEK-NVYTWTAMINGFAAHG 386
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 2/207 (0%)
Query: 33 MCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGA 92
M +GV+P T +L + + D + + H +I + + NSL++ Y+ G
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGL 153
Query: 93 LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
A +F G K+VV+W +I +GS EA+ F +M+ +G+ +E+T +L A
Sbjct: 154 FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA 213
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAV 212
V GR GL T + DV + +VD+ G+ +A + ++P + + V
Sbjct: 214 AGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR-NVV 272
Query: 213 VWGALLGACKTFGNLEMGKQILKQLLE 239
W AL+ + G + +++L+
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLK 299
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 200/289 (69%), Gaps = 6/289 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+WN++IS +V G EA+ +F M +G PD T++S+LS+C+ +GDL GK+
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 65 HDYICD-----NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
H YI + ++I V + N+L++MYAKCG++ A+++F G+ +++ +WN +I LA
Sbjct: 298 HIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA 357
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
LH + +IEMFE+M+ ++P+E+TF G++ ACSHSG V+ GR YF LM + I P++
Sbjct: 358 LH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY CMVD+LGR G L EA ++ + ++P+A+VW LLGACK +GN+E+GK ++LL
Sbjct: 417 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
+ + +SG YVLLSN+Y+ + +WD ++K+RK+ +D+ +KK +S IE D
Sbjct: 477 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEED 525
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N ++ Q + + + L+ M GV PD T +L +CS + + G H +
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
+ ++ + N+L+ +A CG L A ++F + + V+W+ + A G EA+ +
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG 190
F++M + D++ + +++ C ++ R F + DV + M+
Sbjct: 201 FDEMP----YKDQVAWNVMITGCLKCKEMDSARELFDRFTEK-----DVVTWNAMISGYV 251
Query: 191 RGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
G+ EA+ + +++ PD V +LL AC G+LE GK++ +LE S +
Sbjct: 252 NCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSI 311
Query: 248 YV 249
YV
Sbjct: 312 YV 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 47/235 (20%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+W+S+ S + + G+ EAM LF M + N
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWN------------------------- 213
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
V +T C KC + +A ++F +K+VV+WN +I G KEA
Sbjct: 214 -------VMITGC-------LKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEA 259
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR----YYFGLMSSTFGISPDVAHYA 183
+ +F++MR +G PD +T LLSAC+ G +E G+ Y S + I +
Sbjct: 260 LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWN 319
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGAL---LGACKTFGNLEMGKQILK 235
++D+ + G + A+ + + + + D W L L G++EM +++ +
Sbjct: 320 ALIDMYAKCGSIDRAIEVFRGVKDR-DLSTWNTLIVGLALHHAEGSIEMFEEMQR 373
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 265 bits (677), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/335 (39%), Positives = 210/335 (62%), Gaps = 14/335 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWNS+I V+ G++ A++LF M S PD T+ S+LS+C+ +G L+LG
Sbjct: 212 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLG 270
Query: 62 KKAHDYI---CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
AH ++ CD ++ + V + NSL+ MY KCG+L+ A +F GM ++++ SWN +I
Sbjct: 271 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 330
Query: 119 ALHGSGKEAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
A HG +EA+ F++M + + P+ +TF GLL AC+H G V GR YF +M + I
Sbjct: 331 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 390
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA-CKTFGNLEMGKQILK 235
P + HY C+VDL+ R G++ EA+ ++ +PMKPDAV+W +LL A CK ++E+ ++I +
Sbjct: 391 PALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIAR 450
Query: 236 QLLELGRYD-------SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
++ + SG YVLLS +Y+ + RW+D+ +RK+M++ GI+K SSIEI+
Sbjct: 451 NIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEIN 510
Query: 289 GCCYQFMVDDKNHEVSTSIYSMVDQLMDHLKSVGY 323
G ++F D +H + IY + + D L+S+GY
Sbjct: 511 GISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGY 545
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 6/234 (2%)
Query: 10 WNSII-SCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKKAHDY 67
WN++I +C + EA L+ +M G PD T +L +C+++ + GK+ H
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
I + V + N L+++Y CG L A +F MP++++VSWN +I AL G A
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSA 236
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY--YFGLMSSTFGISPDVAHYACM 185
+++F +M+ S PD T +LSAC+ G + +G + F L ++ DV +
Sbjct: 237 LQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 295
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+++ + G L A + Q + K D W A++ T G E ++++
Sbjct: 296 IEMYCKCGSLRMAEQVFQGM-QKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 263 bits (673), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 199/323 (61%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVK+ +SW ++I + Q ++ EA+ +F +M G++PD T+ +++S+C+H+G L +G
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG 1051
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y N + V + ++L++MY+KCG+L+ A+ +FF +P+KN+ WN II LA H
Sbjct: 1052 KEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAH 1111
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA++MF KM + P+ +TF + +AC+H+GLV+ GR + M + I +V H
Sbjct: 1112 GFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEH 1171
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y MV L + G + EA+ LI + +P+AV+WGALL C+ NL + + +L+ L
Sbjct: 1172 YGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLE 1231
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK-CRAISSIEIDGCCYQFMVDDKN 300
+SG Y LL +MY+E RW D+ +IR M + GI+K C SSI ID + F DK+
Sbjct: 1232 PMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKS 1291
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H S + ++D++ D + GY
Sbjct: 1292 HSASDEVCLLLDEIYDQMGLAGY 1314
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 47/264 (17%)
Query: 12 SIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDN 71
++I + G+ EA ++F M D+ +++S+ + D+ + + +
Sbjct: 909 TLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEK 964
Query: 72 NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMF 131
N S N L+N Y G L+ A +F MP K+++SW +I + + +EAI +F
Sbjct: 965 NEATS----NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 132 EKMRASGLFPDEITFTGLLSACSHSGLVEMGR--YYFGLMSSTFGISPDVAHYACMVDL- 188
KM G+ PDE+T + ++SAC+H G++E+G+ + + L + G DV + +VD+
Sbjct: 1021 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN---GFVLDVYIGSALVDMY 1077
Query: 189 ------------------------------LGRGGFLGEAMSLIQKLPM---KPDAVVWG 215
L GF EA+ + K+ M KP+AV +
Sbjct: 1078 SKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFV 1137
Query: 216 ALLGACKTFGNLEMGKQILKQLLE 239
++ AC G ++ G++I + +++
Sbjct: 1138 SVFTACTHAGLVDEGRRIYRSMID 1161
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 22/247 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M N +N++ V ++EL+ RM V P + T S++ + S
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGES 890
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA---- 117
+AH I V + +L++ Y+ G ++ A +F MP+++ ++W ++ A
Sbjct: 891 LQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRV 948
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
L + + A +M EK +E T L++ G +E F M
Sbjct: 949 LDMDSANSLANQMSEK--------NEATSNCLINGYMGLGNLEQAESLFNQMPVK----- 995
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQIL 234
D+ + M+ + EA+++ K+ + PD V ++ AC G LE+GK++
Sbjct: 996 DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 235 KQLLELG 241
L+ G
Sbjct: 1056 MYTLQNG 1062
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 199/330 (60%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
+P + +SWN+IIS + Q G +EA+E++ M G + + T VS+L +CS G L
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G K H + N + + V + SL +MY KCG L+ A+ +F+ +P+ N V WN +I
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G++A+ +F++M G+ PD ITF LLSACSHSGLV+ G++ F +M + +GI+P +
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVD+ GR G L A+ I+ + ++PDA +WGALL AC+ GN+++GK + L E+
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
G +VLLSNMY+ + +W+ + +IR I + G++K SS+E+D F ++
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQT 709
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H + +Y + L LK +GY H V
Sbjct: 710 HPMYEEMYRELTALQAKLKMIGYVPDHRFV 739
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 6/243 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V++ +SWNSII + Q A+ LF M +S + PD TL+S+ S S +GD+
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRAC 367
Query: 62 KKAHDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ + + +T+ N+++ MYAK G + +A +F +P +V+SWN II A
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 121 HGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G EAIEM+ M G + ++ T+ +L ACS +G + G G + G+ DV
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDV 486
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTF-GNLEMGKQILKQLL 238
+ D+ G+ G L +A+SL ++P + ++V W L+ AC F G+ E + K++L
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI-ACHGFHGHGEKAVMLFKEML 544
Query: 239 ELG 241
+ G
Sbjct: 545 DEG 547
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 52/304 (17%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMP-DNATLVSILSSCSHMGDLAL 60
MPV++ SWN++IS + Q G EA+ L +G+ D+ T+VS+LS+C+ GD
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNR 265
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G H Y + + + + N L+++YA+ G L+ +F M ++++SWN II A L
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLS---------AC------------------ 153
+ AI +F++MR S + PD +T L S AC
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 385
Query: 154 ---------SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI-- 202
+ GLV+ R F + +T DV + ++ + GF EA+ +
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNT-----DVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 203 --QKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY-DSGLYVLLSNMYSESQ 259
++ + + W ++L AC G L G ++ +LL+ G Y D + L++MY +
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 260 RWDD 263
R +D
Sbjct: 501 RLED 504
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 21/254 (8%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
++ +WN +IS + + G +E + F M SG+ PD T S+L +C + D G K
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNK 171
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H V + SL+++Y++ A+ A +F MP +++ SWN +I G+
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
KEA+ + +RA D +T LLSAC+ +G G S G+ ++
Sbjct: 232 AKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHS-YSIKHGLESELFVSN 286
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK-----QLL 238
++DL G L + + ++ ++ D + W +++ A E+ +Q L+ Q +
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKA------YELNEQPLRAISLFQEM 339
Query: 239 ELGRYDSGLYVLLS 252
L R L+S
Sbjct: 340 RLSRIQPDCLTLIS 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Query: 76 SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEK-M 134
+V + L+N+Y G + A F + ++V +WN++I G+ E I F M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 135 RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGF 194
+SGL PD TF +L AC +++ + + ++ FG DV A ++ L R
Sbjct: 145 LSSGLTPDYRTFPSVLKAC--RTVIDGNKIH--CLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 195 LGEAMSLIQKLPMKPDAVVWGALL-GACKT 223
+G A L ++P++ D W A++ G C++
Sbjct: 201 VGNARILFDEMPVR-DMGSWNAMISGYCQS 229
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 263 bits (671), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 206/330 (62%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLAL 60
MP KN VSWN+IIS VQ EA+E+FC M GV D T++SI S+C H+G L L
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K + YI N I + V L +L++M+++CG ++AM IF + ++V +W IGA+A+
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G+ + AIE+F+ M GL PD + F G L+ACSH GLV+ G+ F M G+SP+
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLLGR G L EA+ LI+ +PM+P+ V+W +LL AC+ GN+EM +++ L
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G YVLLSN+Y+ + RW+DM K+R M + G++K SSI+I G ++F D++
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H +I +M+D++ +G+ S+V
Sbjct: 729 HPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N++ S +V++G EA+ +F M SGV PD +++S +SSCS + ++ GK H Y+
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 71 NNITVSVTLCNSLMNMYAKC-------------------------------GALQTAMDI 99
N +CN+L++MY KC G + A +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGL 158
F MP+KN+VSWN II L +EAIE+F M++ G+ D +T + SAC H G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP------------ 206
+++ ++ + + GI DV +VD+ R G AMS+ L
Sbjct: 486 LDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 207 ----------------------MKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+KPD V + L AC G ++ GK+I +L+L
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+NS+I + G EA+ LF RM SG+ PD T LS+C+ G + H I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + NSL++ YA+CG L +A +F M ++NVVSW +I A K+A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 130 MFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+F +M R + P+ +T ++SAC+ +E G + + ++ GI + + +VD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVDM 280
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
M +N VSW S+I + + +A++LF RM V P++ T+V ++S+C+ + DL
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+K + +I ++ I V+ + ++L++MY KC A+ A +F N+ N +
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
G +EA+ +F M SG+ PD I+ +S+CS
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 206/330 (62%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLAL 60
MP KN VSWN+IIS VQ EA+E+FC M GV D T++SI S+C H+G L L
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K + YI N I + V L +L++M+++CG ++AM IF + ++V +W IGA+A+
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G+ + AIE+F+ M GL PD + F G L+ACSH GLV+ G+ F M G+SP+
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLLGR G L EA+ LI+ +PM+P+ V+W +LL AC+ GN+EM +++ L
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+G YVLLSN+Y+ + RW+DM K+R M + G++K SSI+I G ++F D++
Sbjct: 669 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDES 728
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H +I +M+D++ +G+ S+V
Sbjct: 729 HPEMPNIEAMLDEVSQRASHLGHVPDLSNV 758
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 67/296 (22%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N++ S +V++G EA+ +F M SGV PD +++S +SSCS + ++ GK H Y+
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 71 NNITVSVTLCNSLMNMYAKC-------------------------------GALQTAMDI 99
N +CN+L++MY KC G + A +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGL 158
F MP+KN+VSWN II L +EAIE+F M++ G+ D +T + SAC H G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP------------ 206
+++ ++ + + GI DV +VD+ R G AMS+ L
Sbjct: 486 LDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 207 ----------------------MKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+KPD V + L AC G ++ GK+I +L+L
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+NS+I + G EA+ LF RM SG+ PD T LS+C+ G + H I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + NSL++ YA+CG L +A +F M ++NVVSW +I A K+A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 130 MFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+F +M R + P+ +T ++SAC+ +E G + + ++ GI + + +VD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVDM 280
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
M +N VSW S+I + + +A++LF RM V P++ T+V ++S+C+ + DL
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+K + +I ++ I V+ + ++L++MY KC A+ A +F N+ N +
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
G +EA+ +F M SG+ PD I+ +S+CS
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 203/322 (63%), Gaps = 2/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +A+ WNSII Q + A+ELF RM +G + + ATL S+L +C+ + L LG
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+AH +I + + L N+L++MY KCG+L+ A+ +F M +++V++W+ +I LA +
Sbjct: 280 MQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+++FE+M++SG P+ IT G+L ACSH+GL+E G YYF M +GI P H
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CM+DLLG+ G L +A+ L+ ++ +PDAV W LLGAC+ N+ + + K+++ L
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 457
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D+G Y LLSN+Y+ SQ+WD +++IR M D GIKK S IE++ + F++ D +H
Sbjct: 458 PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH 517
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ ++QL+ L +GY
Sbjct: 518 PQIVEVSKKLNQLIHRLTGIGY 539
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 34/270 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N +SW ++IS + + H +A+EL M V P+ T S+L SC+ M D+ +
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM- 180
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H I + V + ++L++++AK G + A+ +F M + + WN IIG A +
Sbjct: 181 --LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG--------RYYFGLMSSTF 173
A+E+F++M+ +G ++ T T +L AC+ L+E+G +Y L+ +
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA 298
Query: 174 GI--------------------SPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPD 210
+ DV ++ M+ L + G+ EA+ L +++ KP+
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ +L AC G LE G + + +L
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 102/205 (49%), Gaps = 5/205 (2%)
Query: 37 GVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTA 96
G+ D+AT ++ C + G ++ N + L N L+NMY K L A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 97 MDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
+F MPQ+NV+SW +I A + ++A+E+ M + P+ T++ +L +C +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC--N 173
Query: 157 GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
G+ ++ + G++ G+ DV + ++D+ + G +A+S+ ++ + DA+VW +
Sbjct: 174 GMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNS 230
Query: 217 LLGACKTFGNLEMGKQILKQLLELG 241
++G ++ ++ K++ G
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAG 255
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 197/322 (61%), Gaps = 1/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ +SW ++I+ V++G EA+ F M +SGV PD +++ L++C+++G L+ G
Sbjct: 166 MPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG 225
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H Y+ + +V + NSL+++Y +CG ++ A +F+ M ++ VVSWN +I A +
Sbjct: 226 LWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAAN 285
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ E++ F KM+ G PD +TFTG L+ACSH GLVE G YF +M + ISP + H
Sbjct: 286 GNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEH 345
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG-NLEMGKQILKQLLEL 240
Y C+VDL R G L +A+ L+Q +PMKP+ VV G+LL AC G N+ + ++++K L +L
Sbjct: 346 YGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDL 405
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
YV+LSNMY+ +W+ K+R+ M G+KK SSIEID C + FM D
Sbjct: 406 NVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNA 465
Query: 301 HEVSTSIYSMVDQLMDHLKSVG 322
H +T I +++ + L+ G
Sbjct: 466 HVETTYIREVLELISSDLRLQG 487
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 140/341 (41%), Gaps = 79/341 (23%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHM--GDLALGK 62
+ VSW S I+ + G+ AEA + F M ++GV P++ T +++LS C G ALG
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 63 KAHDYICD-----NNITVSVTLC---------------------------NSLMNMYAKC 90
H Y C N++ V + N++++ Y +
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
G + A +F MP+++++SW +I G +EA+ F +M+ SG+ PD + L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA----CMVDLLGRGGFLGEAMSL----- 201
+AC++ +G FGL + +S D + ++DL R G + A +
Sbjct: 214 NACTN-----LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 202 -----------------------------IQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+Q+ KPDAV + L AC G +E G +
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 233 ILKQLLELGRYDSGL--YVLLSNMYSESQRWDDMKKIRKIM 271
+ + R + Y L ++YS + R +D K+ + M
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 260 bits (665), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 125/313 (39%), Positives = 194/313 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +K+ V W ++I V+ + +A+ELF M + V + T V +LS+CS +G L LG
Sbjct: 215 VKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELG 274
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H ++ + + +S + N+L+NMY++CG + A +F M K+V+S+N +I LA+H
Sbjct: 275 RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMH 334
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ EAI F M G P+++T LL+ACSH GL+++G F M F + P + H
Sbjct: 335 GASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEH 394
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLLGR G L EA I+ +P++PD ++ G LL ACK GN+E+G++I K+L E
Sbjct: 395 YGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE 454
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DSG YVLLSN+Y+ S +W + +IR+ M DSGI+K S+IE+D ++F+V D H
Sbjct: 455 NPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAH 514
Query: 302 EVSTSIYSMVDQL 314
+IY + +L
Sbjct: 515 PHKEAIYQRLQEL 527
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 124/296 (41%), Gaps = 68/296 (22%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCS------------ 53
N + ++I V G+ A+ + L+ RM + V+PDN + S+L +C
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVL 150
Query: 54 -------------------HMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQ 94
G+L KK D + D + V+ T+ ++N Y++CG ++
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRD-HVAATV---MINCYSECGFIK 206
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A+++F + K+ V W +I L + +A+E+F +M+ + +E T +LSACS
Sbjct: 207 EALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACS 266
Query: 155 HSGLVEMGRYYFGLMSS----------------------------TFGI--SPDVAHYAC 184
G +E+GR+ + + F + DV Y
Sbjct: 267 DLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNT 326
Query: 185 MVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
M+ L G EA++ + + +P+ V ALL AC G L++G ++ +
Sbjct: 327 MISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 113/296 (38%), Gaps = 68/296 (22%)
Query: 44 TLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM 103
TL+S+L SC ++ + H I + L+ + + ++ A D+F +
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 104 PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-------HS 156
NV + +I G + + ++ +M + + PD T +L AC H+
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 157 GLVEMG---RYYFGL-MSSTFGIS-------------PDVAHYAC--MVDLLGRGGFLGE 197
++++G GL M +G S PD H A M++ GF+ E
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 198 AMSLIQKLPMKPDAVVWGAL-----------------------------------LGACK 222
A+ L Q + +K D V W A+ L AC
Sbjct: 208 ALELFQDVKIK-DTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACS 266
Query: 223 TFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKKIRKIMNDSGI 276
G LE+G+ + +E R + +V L NMYS ++ +++ ++M D +
Sbjct: 267 DLGALELGRWV-HSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 35/205 (17%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M K+ +S+N++IS G EA+ F M G P+ TLV++L++CSH G L +
Sbjct: 315 VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDI 374
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + + NS+ +F PQ + + I+ L
Sbjct: 375 G---------------LEVFNSMKR-------------VFNVEPQ--IEHYGCIVDLLGR 404
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +EA E + + PD I LLSAC G +E+G + + +PD
Sbjct: 405 VGRLEEAYRFIENI---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE--NPDSG 459
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKL 205
Y + +L G E+ + + +
Sbjct: 460 TYVLLSNLYASSGKWKESTEIRESM 484
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 203/328 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++ VSWN +I C G H +A+ ++ RM GV D+ TLV++LSSC+H+ L +G
Sbjct: 168 MPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG 227
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H CD V + N+L++MYAKCG+L+ A+ +F GM +++V++WN +I +H
Sbjct: 228 VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVH 287
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G EAI F KM ASG+ P+ ITF GLL CSH GLV+ G +F +MSS F ++P+V H
Sbjct: 288 GHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKH 347
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDL GR G L ++ +I D V+W LLG+CK NLE+G+ +K+L++L
Sbjct: 348 YGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLE 407
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+++G YVL++++YS + +RK++ ++ S IEI ++F+VDDK H
Sbjct: 408 AFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMH 467
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPCKHSD 329
S IYS + ++++ GY + S+
Sbjct: 468 PESAVIYSELGEVINRAILAGYKPEDSN 495
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLALGKKAHDYI 68
WN +I ++ + RM +S V PD T L SC + + + H +
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + SL+ Y+ G+++ A +F MP +++VSWNV+I + G +A+
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC---- 184
M+++M G+ D T LLS+C+H + MG I+ D+ +C
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG-------VMLHRIACDIRCESCVFVS 246
Query: 185 --MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++D+ + G L A+ + + K D + W +++
Sbjct: 247 NALIDMYAKCGSLENAIGVFNGM-RKRDVLTWNSMI 281
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 208/329 (63%), Gaps = 7/329 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-----VMPDNATLVSILSSCSHMG 56
MP +N +SW+ +I+ +V G++ EA++LF M + V P+ T+ ++LS+C +G
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-PQKNVVSWNVII 115
L GK H YI ++ + + L +L++MYAKCG+L+ A +F + +K+V +++ +I
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 116 GALALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
LA++G E ++F +M S + P+ +TF G+L AC H GL+ G+ YF +M FG
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
I+P + HY CMVDL GR G + EA S I +PM+PD ++WG+LL + G+++ + L
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 235 KQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQF 294
K+L+EL +SG YVLLSN+Y+++ RW ++K IR M GI K S +E++G ++F
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453
Query: 295 MVDDKNHEVSTSIYSMVDQLMDHLKSVGY 323
+V D++ + S IY+M+D++M L+ GY
Sbjct: 454 VVGDESQQESERIYAMLDEIMQRLREAGY 482
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 74/304 (24%)
Query: 10 WNSIISC---HVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
WN II +V Q + ++ RM V PD T +L S + L LG++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG------------------------ 102
I + + SL+NMY+ CG L++A +F
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 103 -------MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR-----ASGLFPDEITFTGLL 150
MP++NV+SW+ +I + G KEA+++F +M+ + + P+E T + +L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 151 SACSHSGLVEMGRYYFGLMS-------------------------------STFGISPDV 179
SAC G +E G++ + + G DV
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLP----MKPDAVVWGALLGACKTFGNLEMGKQILK 235
Y+ M+ L G E L ++ + P++V + +LGAC G + GK K
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 236 QLLE 239
++E
Sbjct: 327 MMIE 330
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 200/317 (63%), Gaps = 6/317 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
MP +N SWN +I + Q G+ +E + F RM G V+P++AT+ +LS+C+ +G
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 61 GKKAHDY---ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
GK H Y + N + V+V N+L++MY KCGA++ AM++F G+ +++++SWN +I
Sbjct: 207 GKWVHKYGETLGYNKVDVNVK--NALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
LA HG G EA+ +F +M+ SG+ PD++TF G+L AC H GLVE G YF M + F I P
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP 324
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ H C+VDLL R GFL +A+ I K+P+K DAV+W LLGA K + +++G+ L++L
Sbjct: 325 EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEEL 384
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
++L + +V+LSN+Y ++ R+DD +++ M D+G KK +S IE D +F
Sbjct: 385 IKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSS 444
Query: 298 DKNHEVSTSIYSMVDQL 314
+ H + + ++ +L
Sbjct: 445 GEKHPRTEELQRILREL 461
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 43/226 (19%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P ++ V WN++IS +++ G EA LF +M VM
Sbjct: 86 PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMS---------------------- 123
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
N+++ YA G ++ +F MP++NV SWN +I A +G
Sbjct: 124 -----------------WNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNG 166
Query: 123 SGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP-DVA 180
E + F++M G + P++ T T +LSAC+ G + G++ T G + DV
Sbjct: 167 RVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY-GETLGYNKVDVN 225
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
++D+ G+ G + AM + + + + D + W ++ G+
Sbjct: 226 VKNALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHGH 270
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 184/316 (58%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
++WN+++S Q G + EA+ +F RM G+ +N T S + + S ++ GK+ H
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAV 717
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
I +CN+L++MYAKCG++ A F + KN VSWN II A + HG G EA
Sbjct: 718 ITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEA 777
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
++ F++M S + P+ +T G+LSACSH GLV+ G YF M+S +G+SP HY C+VD
Sbjct: 778 LDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVD 837
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
+L R G L A IQ++P+KPDA+VW LL AC N+E+G+ LLEL DS
Sbjct: 838 MLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSAT 897
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSI 307
YVLLSN+Y+ S++WD R+ M + G+KK S IE+ + F V D+NH ++ I
Sbjct: 898 YVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEI 957
Query: 308 YSMVDQLMDHLKSVGY 323
+ L +GY
Sbjct: 958 HEYFQDLTKRASEIGY 973
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 128/243 (52%), Gaps = 8/243 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++AV++N++I+ Q G +AMELF RM + G+ PD+ TL S++ +CS G L G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H Y + + +L+N+YAKC ++TA+D F +NVV WNV++ A L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGISPDVA 180
+ + +F +M+ + P++ T+ +L C G +E+G + + ++ + F ++
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA--- 525
Query: 181 HYAC--MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y C ++D+ + G L A ++ + K D V W ++ + + +Q+L
Sbjct: 526 -YVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 239 ELG 241
+ G
Sbjct: 584 DRG 586
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 144/313 (46%), Gaps = 16/313 (5%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V+N V WN ++ + + +F +M + ++P+ T SIL +C +GDL LG++
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H I N ++ +C+ L++MYAK G L TA DI K+VVSW +I +
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+A+ F +M G+ DE+ T +SAC+ ++ G+ + G S D+
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA-QACVSGFSSDLPFQN 630
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
+V L R G + E+ ++ D + W AL+ + GN E ++ ++ G
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-I 688
Query: 244 DSGLYVLLSNMYSESQRWDDMKK-------IRKIMNDSGIKKCRAISSI-----EIDGCC 291
D+ + S + + S+ +MK+ I K DS + C A+ S+ I
Sbjct: 689 DNNNFTFGSAVKAASET-ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 292 YQFMVDDKNHEVS 304
QF+ +EVS
Sbjct: 748 KQFLEVSTKNEVS 760
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 2/236 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +K+ SW ++IS + AEA+ LFC M V G+MP S+LS+C + L +G
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + +CN+L+++Y G L +A IF M Q++ V++N +I L+
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G++A+E+F++M GL PD T L+ ACS G + G+ ++ G + +
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA-YTTKLGFASNNKI 426
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+++L + + A+ + ++ + V+W +L A +L +I +Q+
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 36/275 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + +WN +I E LF RM V P+ T +L +C G +A
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFD 204
Query: 62 --KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
++ H I + S +CN L+++Y++ G + A +F G+ K+ SW +I L+
Sbjct: 205 VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM------SSTF 173
+ EAI +F M G+ P F+ +LSAC +E+G GL+ S T+
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 174 GISP------------------------DVAHYACMVDLLGRGGFLGEAMSLIQKLP--- 206
+ D Y +++ L + G+ +AM L +++
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++PD+ +L+ AC G L G+Q+ +LG
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 105/255 (41%), Gaps = 50/255 (19%)
Query: 37 GVMPDNATLVSILSSC-SHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQT 95
G+ P++ TL +L C G L G+K H I + + L L + Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 96 AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
A +F MP++ + +WN +I LA E +F +M + + P+E TF+G+L AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 156 SGL-------VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
+ + Y GL ST +P ++DL R GF+ A + L +K
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNP-------LIDLYSRNGFVDLARRVFDGLRLK 251
Query: 209 ----------------------------------PDAVVWGALLGACKTFGNLEMGKQIL 234
P + ++L ACK +LE+G+Q+
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 235 KQLLELGRYDSGLYV 249
+L+LG + S YV
Sbjct: 312 GLVLKLG-FSSDTYV 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG----- 56
+ KN VSWN+II+ + + G +EA++ F +M S V P++ TLV +LS+CSH+G
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 57 ---------DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK- 106
+ L K Y+C +++M + G L A + MP K
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVC-------------VVDMLTRAGLLSRAKEFIQEMPIKP 859
Query: 107 NVVSWNVIIGALALH 121
+ + W ++ A +H
Sbjct: 860 DALVWRTLLSACVVH 874
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 201/320 (62%), Gaps = 4/320 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+N ++WN +I +V+ Q+ EA++ M + + P+ + S L++C+ +GDL K
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + D+ I ++ L ++L+++YAKCG + T+ ++F+ + + +V WN +I A HG
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EAI +F +M A + PD ITF GLL+ CSH GL+E G+ YFGLMS F I P + HY
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
MVDLLGR G + EA LI+ +P++PD V+W +LL + +T+ N E+G+ ++ L +
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQN---LSKA 363
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
SG YVLLSN+YS +++W+ +K+R++M+ GI+K + S +E G ++F D +H
Sbjct: 364 KSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIE 423
Query: 304 STSIYSMVDQLMDHLKSVGY 323
+ +IY +++ L+ KS G+
Sbjct: 424 TKAIYKVLEGLIQKTKSQGF 443
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA-SGL 139
N ++ K G A + +NV++WN++IG + +EA++ + M + + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 140 FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAM 199
P++ +F L+AC+ G + ++ LM + GI + + +VD+ + G +G +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDS-GIELNAILSSALVDVYAKCGDIGTSR 220
Query: 200 SLIQKLPMKPDAVVWGALLGACKTFG 225
+ + + D +W A++ T G
Sbjct: 221 EVFYSVK-RNDVSIWNAMITGFATHG 245
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 202/321 (62%), Gaps = 2/321 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKK 63
++ VSWN +I + Q G +A+ LF ++ G PD T+V+ LS+CS +G L G+
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H ++ + I ++V +C L++MY+KCG+L+ A+ +F P+K++V+WN +I A+HG
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 124 GKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
++A+ +F +M+ +GL P +ITF G L AC+H+GLV G F M +GI P + HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
C+V LLGR G L A I+ + M D+V+W ++LG+CK G+ +GK+I + L+ L
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
+SG+YVLLSN+Y+ ++ + K+R +M + GI K IS+IEI+ ++F D+ H
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 303 VSTSIYSMVDQLMDHLKSVGY 323
S IY+M+ ++ + +KS GY
Sbjct: 521 KSKEIYTMLRKISERIKSHGY 541
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 38/237 (16%)
Query: 21 GQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLC 80
G +A L+ ++ S + P+ T S+L SCS GK H ++ + + +
Sbjct: 109 GLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVA 164
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQK-------------------------------NVV 109
L+++YAK G + +A +F MP++ ++V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 110 SWNVIIGALALHGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGL 168
SWNV+I A HG +A+ +F+K+ A G PDEIT LSACS G +E GR+
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 169 MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
+ S+ I +V ++D+ + G L EA+ + P K D V W A++ G
Sbjct: 285 VKSS-RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMHG 339
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 10/159 (6%)
Query: 83 LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPD 142
L YA G ++ ++ +F ++ + I +++G +A ++ ++ +S + P+
Sbjct: 70 LHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPN 129
Query: 143 EITFTGLLSACS-HSG-LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
E TF+ LL +CS SG L+ FGL GI P VA +VD+ +GG + A
Sbjct: 130 EFTFSSLLKSCSTKSGKLIHTHVLKFGL-----GIDPYVA--TGLVDVYAKGGDVVSAQK 182
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ ++P + V A++ GN+E + + + E
Sbjct: 183 VFDRMPER-SLVSSTAMITCYAKQGNVEAARALFDSMCE 220
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 197/327 (60%), Gaps = 1/327 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLALGKK 63
K+ VS+NSI+S + Q G EA E+F R+ + V+ NA TL ++L + SH G L +GK
Sbjct: 249 KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
HD + + V + S+++MY KCG ++TA F M KNV SW +I +HG
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+A+E+F M SG+ P+ ITF +L+ACSH+GL G +F M FG+ P + HY
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDLLGR GFL +A LIQ++ MKPD+++W +LL AC+ N+E+ + + +L EL
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSS 488
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
+ G Y+LLS++Y+++ RW D++++R IM + G+ K S +E++G + F++ D+ H
Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQ 548
Query: 304 STSIYSMVDQLMDHLKSVGYPCKHSDV 330
IY + +L L GY S V
Sbjct: 549 REKIYEFLAELNRKLLEAGYVSNTSSV 575
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 137/320 (42%), Gaps = 43/320 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ SWNS+I+ + G AEA+ F M + P ++ + +CS + D+ GK+ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + ++L+ MY+ CG L+ A +F +P++N+VSW +I L+G+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 126 EAIEMFEKMRA------SGLFPDEITFTGLLSACS-----------HSGLVEMG------ 162
+A+ +F+ + +F D + ++SACS HS +++ G
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 163 -------RYYFG------LMSSTFG--ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM 207
Y G + F + D Y ++ + + G EA + ++L
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 208 KP----DAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLY-VLLSNMYSESQRWD 262
+A+ +L A G L +GK I Q++ +G D + + +MY + R +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 263 DMKKIRKIMNDSGIKKCRAI 282
+K M + ++ A+
Sbjct: 340 TARKAFDRMKNKNVRSWTAM 359
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 18/283 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNAT------LVSILSSCSHM 55
+P +N VSW S+I + G +A+ LF + V D+A LVS++S+CS +
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 56 GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKC--GALQTAMDIFFGMPQKNVVSWNV 113
L + H ++ V++ N+L++ YAK G + A IF + K+ VS+N
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 114 IIGALALHGSGKEAIEMFEKMRASGLFP-DEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
I+ A G EA E+F ++ + + + IT + +L A SHSG + +G+ +
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR- 315
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
G+ DV ++D+ + G + A ++ K + W A++ G+ +
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAAKALE 374
Query: 233 ILKQLLELG---RYDSGLYVLL----SNMYSESQRWDDMKKIR 268
+ +++ G Y + + VL + ++ E RW + K R
Sbjct: 375 LFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN SW ++I+ + G A+A+ELF M SGV P+ T VS+L++CSH G G
Sbjct: 348 MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEG 407
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
+ + + + + ++++ + G LQ A D+ M K + + W+ ++ A
Sbjct: 408 WRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACR 467
Query: 120 LH 121
+H
Sbjct: 468 IH 469
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 200/324 (61%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC--VSGVMPDNATLVSILSSCSHMGDLA 59
MPV+N VSW+++I+C+ + G+ EA+ F M P++ T+VS+L +C+ + L
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK H YI + + + ++L+ MY +CG L+ +F M ++VVSWN +I +
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+HG GK+AI++FE+M A+G P +TF +L ACSH GLVE G+ F M GI P +
Sbjct: 363 VHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQI 422
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACMVDLLGR L EA ++Q + +P VWG+LLG+C+ GN+E+ ++ ++L
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFA 482
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L ++G YVLL+++Y+E+Q WD++K+++K++ G++K +E+ Y F+ D+
Sbjct: 483 LEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDE 542
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+ + I++ + +L + +K GY
Sbjct: 543 FNPLMEQIHAFLVKLAEDMKEKGY 566
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 46/310 (14%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
+S N +I +EG+ +A+ R+ P T ++ C H L+ + H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
I DN L L+ MY+ G++ A +F ++ + WN + AL L G G+E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACS---------------HSGLVEMG---------- 162
+ ++ KM G+ D T+T +L AC H+ L G
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 163 ----RYYFGLM---SSTFGISP--DVAHYACMVDLLGRGGFLGEAMSLIQKLPMK----- 208
FG + S FG P +V ++ M+ + G EA+ +++ +
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWDDMKK 266
P++V ++L AC + LE GK I +L G DS L V+ L MY + + ++
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRG-LDSILPVISALVTMYGRCGKLEVGQR 341
Query: 267 IRKIMNDSGI 276
+ M+D +
Sbjct: 342 VFDRMHDRDV 351
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 192/313 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPVK ++WN++IS + Q G + +EL+ +M SGV PD TLVS+LSSC+H+G +G
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ + N +V + N+ ++MYA+CG L A +F MP K++VSW +IG +H
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ + +F+ M G+ PD F +LSACSHSGL + G F M + + P H
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C+VDLLGR G L EAM I+ +P++PD VWGALLGACK N++M + +++E
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFE 456
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ G YVL+SN+YS+S+ + + +IR +M + +K S +E G + F+ D++H
Sbjct: 457 PNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSH 516
Query: 302 EVSTSIYSMVDQL 314
E + ++ M+D+L
Sbjct: 517 EQTEEVHRMLDEL 529
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 140/267 (52%), Gaps = 3/267 (1%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
+V +N++IS + + +A +F RM +GV D+ T++ ++ C+ L LG+ H
Sbjct: 121 SVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHG 180
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
+ V + NS + MY KCG+++ +F MP K +++WN +I + +G +
Sbjct: 181 QCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYD 240
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
+E++E+M++SG+ PD T +LS+C+H G ++G + G + + G P+V +
Sbjct: 241 VLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG-HEVGKLVESNGFVPNVFVSNASI 299
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDS 245
+ R G L +A ++ +P+K V W A++G G E+G + +++ G R D
Sbjct: 300 SMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMN 272
++V++ + S S D ++ + M
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMK 385
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
+ WN + + +E++ L+ M SG PD + IL SC+ + G++ H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS--WNVIIGALALHGSG 124
++ + +L++MY KCG + A +F PQ + +S +N +I +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A MF +M+ +G+ D +T GL+ C+ + +GR G G+ +VA
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHG-QCVKGGLDSEVAVLNS 196
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ + + G + L ++P+K + W A++
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVI 229
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MPVK+ VSW ++I C+ G + LF M G+ PD A V +LS+CSH G
Sbjct: 317 IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 61 GKKAHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGAL 118
G + + + + + L+++ + G L AM+ MP + + W ++GA
Sbjct: 377 GLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGAC 436
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
+H + A F K+ P+ I + L+S
Sbjct: 437 KIHKNVDMAELAFAKVIE--FEPNNIGYYVLMS 467
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 193/319 (60%), Gaps = 1/319 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWN++I+ H + +A+ELF M G P + + S+ +CS G L GK
Sbjct: 225 RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y+ + + N+L++MYAK G++ A IF + +++VVSWN ++ A A HG G
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFG 344
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
KEA+ FE+MR G+ P+EI+F +L+ACSHSGL++ G +Y+ LM GI P+ HY
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVT 403
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR G L A+ I+++P++P A +W ALL AC+ N E+G + + EL D
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 463
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
G +V+L N+Y+ RW+D ++RK M +SG+KK A S +EI+ + F+ +D+ H
Sbjct: 464 PGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQR 523
Query: 305 TSIYSMVDQLMDHLKSVGY 323
I ++++ +K +GY
Sbjct: 524 EEIARKWEEVLAKIKELGY 542
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 9/243 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V+W ++IS + Q + +A+ F +M G P+ TL S++ + + G
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + +V + ++L+++Y + G + A +F + +N VSWN +I A
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++A+E+F+ M G P ++ L ACS +G +E G++ M + +
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS---GEKLVA 297
Query: 182 YA--CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+A ++D+ + G + +A + +L K D V W +LL A G GK+ + E
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG---FGKEAVWWFEE 353
Query: 240 LGR 242
+ R
Sbjct: 354 MRR 356
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 2/206 (0%)
Query: 36 SGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQT 95
S + D ++L C+ L G+ H +I + + + N+L+NMYAKCG+L+
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 96 AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
A +F MPQ++ V+W +I + H +A+ F +M G P+E T + ++ A +
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWG 215
G G G +V + ++DL R G + +A + L + D V W
Sbjct: 174 ERRGCCGHQLHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND-VSWN 231
Query: 216 ALLGACKTFGNLEMGKQILKQLLELG 241
AL+ E ++ + +L G
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDG 257
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 199/321 (61%), Gaps = 3/321 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELF-CRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MP KN SW ++IS Q G ++EA+++F C V P++ T+VS+L +C+++G+L +
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-PQKNVVSWNVIIGALA 119
G++ Y +N ++ +CN+ + MY+KCG + A +F + Q+N+ SWN +IG+LA
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG EA+ +F +M G PD +TF GLL AC H G+V G+ F M ISP +
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY CM+DLLGR G L EA LI+ +PMKPDAVVWG LLGAC GN+E+ + + L +
Sbjct: 354 EHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFK 413
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISS-IEIDGCCYQFMVDD 298
L + G V++SN+Y+ +++WD + ++RK+M + K S +E+ ++F V+D
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVED 473
Query: 299 KNHEVSTSIYSMVDQLMDHLK 319
K+H S IY +++++ +K
Sbjct: 474 KSHPRSYEIYQVLEEIFRRMK 494
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 110/264 (41%), Gaps = 33/264 (12%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+N +I + Q E++ L+ + G+ P + T I ++ + + H
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 70 DNNITVSVTLCNSLMNMYAKCGAL-------------------------------QTAMD 98
+ C +L+ YAK GAL + AM+
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSG 157
+F MP+KNV SW +I + +G+ EA++MF M + + P+ IT +L AC++ G
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGAL 217
+E+GR G G ++ +++ + G + A L ++L + + W ++
Sbjct: 230 ELEIGRRLEGYAREN-GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSM 288
Query: 218 LGACKTFGNLEMGKQILKQLLELG 241
+G+ T G + + Q+L G
Sbjct: 289 IGSLATHGKHDEALTLFAQMLREG 312
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 254 bits (648), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 200/326 (61%), Gaps = 4/326 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ V+WNS++S Q G EA+++F +M SG PD+AT VS+LS+C+ G ++LG
Sbjct: 168 MPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG 227
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H YI + ++V L +L+N+Y++CG + A ++F M + NV +W +I A H
Sbjct: 228 SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTH 287
Query: 122 GSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G++A+E+F KM G P+ +TF +LSAC+H+GLVE GR + M+ ++ + P V
Sbjct: 288 GYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVE 347
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAV---VWGALLGACKTFGNLEMGKQILKQL 237
H+ CMVD+LGR GFL EA I +L A +W A+LGACK N ++G +I K+L
Sbjct: 348 HHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+ L + G +V+LSN+Y+ S + D++ IR M + ++K S IE++ Y F +
Sbjct: 408 IALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMG 467
Query: 298 DKNHEVSTSIYSMVDQLMDHLKSVGY 323
D++H+ + IY ++ L+ K +GY
Sbjct: 468 DESHQETGEIYRYLETLISRCKEIGY 493
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 122/236 (51%), Gaps = 2/236 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P+ + +NS+I + + + RM S V P N T S++ SC+ + L +G
Sbjct: 67 VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIG 126
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + + + +L+ Y+KCG ++ A +F MP+K++V+WN ++ +
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EAI++F +MR SG PD TF LLSAC+ +G V +G + + S G+ +V
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKL 245
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+++L R G +G+A + K+ + + W A++ A T G + ++ ++
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 190/324 (58%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N SW ++I H + G EA++LF M GV P TL+SILS C+ + L G
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + V V + + LM MY KCG L + IF P K+++ WN II A H
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 122 GSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA+++F +M SG P+E+TF LSACS++G+VE G + M S FG+ P A
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACMVD+LGR G EAM +I + ++PDA VWG+LLGAC+T L++ + K+L+E+
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+SG Y+LLSNMY+ RW D+ ++RK+M ++K S E++ + F N
Sbjct: 531 EPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGIN 590
Query: 301 -HEVSTSIYSMVDQLMDHLKSVGY 323
H SI ++D+L L+ GY
Sbjct: 591 SHPEQESILKILDELDGLLREAGY 614
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 117/287 (40%), Gaps = 46/287 (16%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG----------------------- 37
+MP +N VSW +++ +V G+ A LF +M
Sbjct: 104 LMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL 163
Query: 38 --VMP--DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGAL 93
++P DN S++ G + ++ D + + ++ T+ Y + +
Sbjct: 164 YEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG----YGQNNRV 219
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
A IF MP+K VSW ++ +G ++A E+FE M + I ++S
Sbjct: 220 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISGL 275
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS---LIQKLPMKPD 210
G + R F M + A + ++ + R GF EA+ L+QK ++P
Sbjct: 276 GQKGEIAKARRVFDSMKER-----NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMY 255
++L C + +L GKQ+ QL+ ++D +YV +L MY
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRC-QFDVDVYVASVLMTMY 376
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ SWNS+++ + +A +LF M ++ N ++S G++ +K
Sbjct: 46 KSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNG----LVSGYMKNGEIDEARKV 101
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D + + N+ VS T +L+ Y G + A +F+ MP+KN VSW V++ G
Sbjct: 102 FDLMPERNV-VSWT---ALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRI 157
Query: 125 KEAIEMFEKMRASGLFPDE--ITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+A +++E + PD+ I T ++ G V+ R F MS I+ +
Sbjct: 158 DDACKLYE------MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT-----W 206
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
MV G+ + +A + +P K + V W ++L G +E +++ +
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEKTE-VSWTSMLMGYVQNGRIEDAEELFE 258
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP K VSW S++ +VQ G+ +A ELF VMP
Sbjct: 228 VMPEKTEVSWTSMLMGYVQNGRIEDAEELF------EVMP-------------------- 261
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
V CN++++ + G + A +F M ++N SW +I
Sbjct: 262 -------------VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDV 179
+G EA+++F M+ G+ P T +LS C+ + G+ + L+ F + DV
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV--DV 366
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ ++ + + G L ++ + + P K D ++W +++ + G +G++ LK E
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHG---LGEEALKVFCE 422
Query: 240 L 240
+
Sbjct: 423 M 423
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 196/330 (59%), Gaps = 1/330 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VSW ++IS +VQ+G H ++LF +M S + D +T ++L + + L LG
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H +I + +V + L++MYAKCG+++ A+ +F MP +N VSWN +I A A +
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ AI F KM SGL PD ++ G+L+ACSH G VE G YF MS +GI+P H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACM+DLLGR G EA L+ ++P +PD ++W ++L AC+ N + ++ ++L +
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
Query: 242 R-YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ D+ YV +SN+Y+ + W+ ++ ++K M + GIKK A S +E++ + F +D+
Sbjct: 652 KLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQT 711
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
H I +++L ++ GY S V
Sbjct: 712 HPNGDEIVRKINELTAEIEREGYKPDTSSV 741
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 128/255 (50%), Gaps = 14/255 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + VS+N +IS + Q Q+ ++ F M G N ++LS +++ L +G
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG 370
Query: 62 KKAHDYICDNNITVSVTLC---NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
++ H C + + ++ NSL++MYAKC + A IF +PQ+ VSW +I
Sbjct: 371 RQLH---CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 119 ---ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
LHG+G +++F KMR S L D+ TF +L A + + +G+ + + G
Sbjct: 428 VQKGLHGAG---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS-GN 483
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+V + +VD+ + G + +A+ + +++P + +AV W AL+ A G+ E
Sbjct: 484 LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFA 542
Query: 236 QLLELGRYDSGLYVL 250
+++E G + +L
Sbjct: 543 KMIESGLQPDSVSIL 557
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K++V++N++I+ + ++G + E++ LF +M SG P + T +L + + D ALG
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + ++ N +++ Y+K + +F MP+ + VS+NV+I + +
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ ++ F +M+ G F +LS ++ ++MGR + + + H
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH--CQALLATADSILH 387
Query: 182 YA-CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+VD+ + EA + + LP + V W AL+
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALI 424
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 10/246 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG--VMPDNATLVSILSSCSHMGDLA 59
MP + V+W ++ + + EA +LF +MC S +PD+ T ++L C+
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 60 LGKKAHDYIC----DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
+ H + D N ++V+ N L+ Y + L A +F +P+K+ V++N +I
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLI 222
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
G E+I +F KMR SG P + TF+G+L A +G+ L S T G
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHAL-SVTTGF 281
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
S D + ++D + + E L ++P + D V + ++ + E +
Sbjct: 282 SRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 236 QLLELG 241
++ +G
Sbjct: 341 EMQCMG 346
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 31 CRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKC 90
R+ +G D I+ G ++ +K +D + N TVS N++++ + K
Sbjct: 37 ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKN-TVST---NTMISGHVKT 92
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM--RASGLFPDEITFTG 148
G + +A D+F MP + VV+W +++G A + EA ++F +M +S PD +TFT
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 149 LLSACS 154
LL C+
Sbjct: 153 LLPGCN 158
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 194/316 (61%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V +N++I+ + + + EA+ LF M + P+ TL+S+LSSC+ +G L LGK H Y
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
++ V + +L++M+AKCG+L A+ IF M K+ +W+ +I A A HG +++
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+ MFE+MR+ + PDEITF GLL+ACSH+G VE GR YF M S FGI P + HY MVD
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVD 375
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
LL R G L +A I KLP+ P ++W LL AC + NL++ +++ +++ EL G
Sbjct: 376 LLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGD 435
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSI 307
YV+LSN+Y+ +++W+ + +RK+M D K SSIE++ ++F D +T +
Sbjct: 436 YVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKL 495
Query: 308 YSMVDQLMDHLKSVGY 323
+ +D+++ LK GY
Sbjct: 496 HRALDEMVKELKLSGY 511
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 129/266 (48%), Gaps = 3/266 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + V +NS+ + + E LF + G++PDN T S+L +C+ L G
Sbjct: 89 MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + +V +C +L+NMY +C + +A +F + + VV +N +I A
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA+ +F +M+ L P+EIT +LS+C+ G +++G++ + V
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY-AKKHSFCKYVKV 267
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL-EL 240
++D+ + G L +A+S+ +K+ K D W A++ A G E + +++ E
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKK 266
+ D ++ L N S + R ++ +K
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRK 352
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 251 bits (641), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 190/318 (59%), Gaps = 4/318 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ SWN+I++ Q G EA+ LF RM + P+ T+V +LS+C+ G L L
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K H + +++ V + NSL+++Y KCG L+ A +F +K++ +WN +I AL
Sbjct: 279 AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFAL 338
Query: 121 HGSGKEAIEMFE---KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
HG +EAI +FE K+ + + PD ITF GLL+AC+H GLV GR YF LM++ FGI P
Sbjct: 339 HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEP 398
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ HY C++DLLGR G EA+ ++ + MK D +WG+LL ACK G+L++ + +K L
Sbjct: 399 RIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNL 458
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+ L + G +++N+Y E W++ ++ RK++ K S IEID +QF
Sbjct: 459 VALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSL 518
Query: 298 DKNHEVSTSIYSMVDQLM 315
DK+H + IY ++D L+
Sbjct: 519 DKSHPETEEIYMILDSLI 536
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 14/210 (6%)
Query: 38 VMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAM 97
V+ A L S SS SH + L ++ D + + N+ VS T ++++ YA+ G + A+
Sbjct: 161 VVVQTALLHSYASSVSH---ITLARQLFDEMSERNV-VSWT---AMLSGYARSGDISNAV 213
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHS 156
+F MP+++V SWN I+ A +G EA+ +F +M + P+E+T +LSAC+ +
Sbjct: 214 ALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQT 273
Query: 157 GLVEMGRYYFGLMSSTF--GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
G +++ + G+ + + +S DV +VDL G+ G L EA S+ K+ K W
Sbjct: 274 GTLQLAK---GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF-KMASKKSLTAW 329
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGRYD 244
+++ G E + +++++L D
Sbjct: 330 NSMINCFALHGRSEEAIAVFEEMMKLNIND 359
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELF---CRMCVSGVMPDNATLVSILSSCSHMGD 57
M K+ +WNS+I+C G+ EA+ +F ++ ++ + PD+ T + +L++C+H G
Sbjct: 320 MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGL 379
Query: 58 LALGKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVII 115
++ G+ D + + I + L+++ + G A+++ M K + W ++
Sbjct: 380 VSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLL 439
Query: 116 GALALHG 122
A +HG
Sbjct: 440 NACKIHG 446
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 251 bits (640), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 207/329 (62%), Gaps = 1/329 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N +W+ +I+ + + +A++LF M GV+ + +VS++SSC+H+G L G
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++A++Y+ +++TV++ L +L++M+ +CG ++ A+ +F G+P+ + +SW+ II LA+H
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+ F +M + G P ++TFT +LSACSH GLVE G + M GI P + H
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEH 388
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VD+LGR G L EA + I K+ +KP+A + GALLGACK + N E+ +++ L+++
Sbjct: 389 YGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVK 448
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQF-MVDDKN 300
SG YVLLSN+Y+ + +WD ++ +R +M + +KK S IEIDG +F M DD+
Sbjct: 449 PEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQK 508
Query: 301 HEVSTSIYSMVDQLMDHLKSVGYPCKHSD 329
H I ++++ ++ +GY D
Sbjct: 509 HPEMGKIRRKWEEILGKIRLIGYKGNTGD 537
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 125/268 (46%), Gaps = 35/268 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +N +I C + ++A + +M S + PDN T ++ + S M + +G++ H
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTH 140
Query: 66 DYICDNNITVSVTLCNSLMNMYA-------------------------------KCGALQ 94
I V + NSL++MYA KCG ++
Sbjct: 141 SQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVE 200
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
A ++F MP +N+ +W+++I A + ++AI++FE M+ G+ +E ++S+C+
Sbjct: 201 NAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCA 260
Query: 155 HSGLVEMG-RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
H G +E G R Y ++ S ++ + +VD+ R G + +A+ + + LP + D++
Sbjct: 261 HLGALEFGERAYEYVVKSHMTVNLILG--TALVDMFWRCGDIEKAIHVFEGLP-ETDSLS 317
Query: 214 WGALLGACKTFGNLEMGKQILKQLLELG 241
W +++ G+ Q++ LG
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLG 345
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 112/270 (41%), Gaps = 28/270 (10%)
Query: 46 VSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM-------NMYAKCGALQTAMD 98
+++L SCS DL K H ++ ++ V + + L+ L A
Sbjct: 16 LALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
IF + N+ +N++I + +A + +M S ++PD ITF L+ A S
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
V +G + FG DV +V + GF+ A + ++ + D V W +++
Sbjct: 133 VLVGEQTHSQIVR-FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR-DVVSWTSMV 190
Query: 219 -GACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSG-- 275
G CK G +E +++ ++ + + ++ N Y+++ ++ + + M G
Sbjct: 191 AGYCKC-GMVENAREMFDEMPHRNLFT---WSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 276 ---------IKKCRAISSIEIDGCCYQFMV 296
I C + ++E Y+++V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVV 276
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 190/298 (63%), Gaps = 9/298 (3%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLALGKK 63
K+ VSWNS+IS V + EA++LF M SG+ PD L S+LS+C+ +G + G+
Sbjct: 268 KDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRW 327
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H+YI I + ++++MYAKCG ++TA++IF G+ KNV +WN ++G LA+HG
Sbjct: 328 VHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGH 387
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST-FGISPDVAHY 182
G E++ FE+M G P+ +TF L+AC H+GLV+ GR YF M S + + P + HY
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY 447
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL-EMGKQILKQLLELG 241
CM+DLL R G L EA+ L++ +P+KPD + GA+L ACK G L E+ K+IL L++
Sbjct: 448 GCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIE 507
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
DSG+YVLLSN+++ ++RWDD+ +IR++M GI K S IE +FM D+
Sbjct: 508 FEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE------KFMTLDQ 559
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 6/241 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++ VSW II+ + G + EA++ F +M V P+ AT V +L S +G L+LG
Sbjct: 167 MPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLG 223
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H I +S+ N+L++MY KC L AM +F + +K+ VSWN +I L
Sbjct: 224 KGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHC 283
Query: 122 GSGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
KEAI++F M+ +SG+ PD T +LSAC+ G V+ GR+ + T GI D
Sbjct: 284 ERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYI-LTAGIKWDTH 342
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+VD+ + G++ A+ + + K + W ALLG G+ + +++++L
Sbjct: 343 IGTAIVDMYAKCGYIETALEIFNGIRSK-NVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 241 G 241
G
Sbjct: 402 G 402
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 124/291 (42%), Gaps = 42/291 (14%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V ++ S+N+++S + + + + +G PD T + +C + GK+
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + + NSL++ Y CG + A +F MP ++VVSW II G
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGL 187
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDVAHY 182
KEA++ F KM P+ T+ +L + G + +G+ GL + IS + +
Sbjct: 188 YKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN- 243
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLP-----------------------------------M 207
++D+ + L +AM + +L +
Sbjct: 244 -ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSE 257
KPD + ++L AC + G ++ G+ + + +L G ++D+ + + +MY++
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAK 353
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 193/315 (61%), Gaps = 1/315 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M K VSW ++IS + G + EAM+ F M ++G+ PD +L+S+L SC+ +G L L
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H Y +CN+L+ MY+KCG + A+ +F M K+V+SW+ +I A
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 319
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG+ AIE F +M+ + + P+ ITF GLLSACSH G+ + G YF +M + I P +
Sbjct: 320 HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIE 379
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY C++D+L R G L A+ + + +PMKPD+ +WG+LL +C+T GNL++ + L+EL
Sbjct: 380 HYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL 439
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
D G YVLL+N+Y++ +W+D+ ++RK++ + +KK S IE++ +F+ D +
Sbjct: 440 EPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
Query: 301 HEVSTSIYSMVDQLM 315
T I S+V QL
Sbjct: 500 KPFWTEI-SIVLQLF 513
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 47/303 (15%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLALGKKA 64
N +NSII + + + + ++ ++ +PD T + SC+ +G LGK+
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++C V N+L++MY K L A +F M +++V+SWN ++ A G
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQM 191
Query: 125 K-------------------------------EAIEMFEKMRASGLFPDEITFTGLLSAC 153
K EA++ F +M+ +G+ PDEI+ +L +C
Sbjct: 192 KKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSC 251
Query: 154 SHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+ G +E+G+ + L + G ++++ + G + +A+ L ++ K D +
Sbjct: 252 AQLGSLELGK-WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK-DVIS 309
Query: 214 WGALL----------GACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDD 263
W ++ GA +TF ++ K + LG + +V M+ E R+ D
Sbjct: 310 WSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHV---GMWQEGLRYFD 366
Query: 264 MKK 266
M +
Sbjct: 367 MMR 369
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 194/326 (59%), Gaps = 1/326 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +KN VSWN++I H+Q G + + F G PD AT +++L SC MG + L
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I + + + +L+++Y+K G L+ + +F + + ++W ++ A A H
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G++AI+ FE M G+ PD +TFT LL+ACSHSGLVE G++YF MS + I P + H
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDH 374
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+CMVDLLGR G L +A LI+++PM+P + VWGALLGAC+ + + ++G + ++L EL
Sbjct: 375 YSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELE 434
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D YV+LSN+YS S W D +IR +M G+ + S IE ++F+V D +H
Sbjct: 435 PRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSH 494
Query: 302 EVSTSIYSMVDQLMDHLKS-VGYPCK 326
S I + ++ +KS +GY K
Sbjct: 495 PESEKIQKKLKEIRKKMKSEMGYKSK 520
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 7/238 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS--GVMPDNATLVSILSSCSHMGDLA 59
MP ++ VSWNS+IS + G + E+ RM +S G P+ T +S++S+C + G
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G+ H + + V + N+ +N Y K G L ++ +F + KN+VSWN +I
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G ++ + F R G PD+ TF +L +C G+V + + GL+ G S +
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG-GFSGNK 270
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++DL + G L ++ ++ ++ PD++ W A+L A T G G+ +K
Sbjct: 271 CITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHG---FGRDAIKHF 324
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRAS--G 138
+ L+ Y + G A +F MP++++VSWN +I + G + E+ +M S G
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEA 198
P+E+TF ++SAC + G E GR GL+ FG+ +V ++ G+ G L +
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK-FGVLEEVKVVNAFINWYGKTGDLTSS 188
Query: 199 MSLIQKLPMKPDAVVWGALL 218
L + L +K + V W ++
Sbjct: 189 CKLFEDLSIK-NLVSWNTMI 207
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 201/320 (62%), Gaps = 1/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ VSWNS+I+ Q + A+++F +M VSG+ D ++ + LS+C+++ + GK
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI 564
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ +++ V ++L++MYAKCG L+ AM++F M +KN+VSWN II A HG
Sbjct: 565 HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKL 624
Query: 125 KEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
K+++ +F +M SG+ PD+ITF ++S+C H G V+ G +F M+ +GI P HYA
Sbjct: 625 KDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA 684
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
C+VDL GR G L EA ++ +P PDA VWG LLGAC+ N+E+ + +L++L
Sbjct: 685 CVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPS 744
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
+SG YVL+SN ++ ++ W+ + K+R +M + ++K S IEI+ + F+ D NH
Sbjct: 745 NSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPE 804
Query: 304 STSIYSMVDQLMDHLKSVGY 323
S+ IYS+++ L+ L+ GY
Sbjct: 805 SSHIYSLLNSLLGELRLEGY 824
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 124/234 (52%), Gaps = 2/234 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V + ++IS ++ G + +++E+F + + P+ TLVSIL + L LG++ H
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+I + ++++MYAKCG + A +IF + ++++VSWN +I A +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
AI++F +M SG+ D ++ + LSAC++ G+ G M ++ DV + +
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTL 583
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+D+ + G L AM++ + + K + V W +++ AC G L+ + +++E
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 2/237 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MM + V+WN +IS +VQ G E++ F M SGV+PD T S+L S S +L
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K+ H YI ++I++ + L ++L++ Y KC + A +IF +VV + +I
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G +++EMF + + P+EIT +L +++GR G + G
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCN 477
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++D+ + G + A + ++L K D V W +++ C N I +Q+
Sbjct: 478 IGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 43/262 (16%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNSIIS V+ G +A+ + +M GV PD +T ++ +C + + K D++
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF----KGIDFLS 161
Query: 70 DNNITVSVTLCN-----SLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D ++ + CN SL+ Y + G + +F + QK+ V WNV++ A G+
Sbjct: 162 DTVSSLGMD-CNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM--------------- 169
I+ F MR + P+ +TF +LS C+ L+++G GL+
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 170 -------------SSTFGI--SPDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDA 211
S F + D + CM+ + G + E+++ ++ + PDA
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 212 VVWGALLGACKTFGNLEMGKQI 233
+ + +LL + F NLE KQI
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQI 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V WN +++ + + G ++ F M + + P+ T +LS C+ + LG +
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + ++ NSL++MY+KCG A +F M + + V+WN +I G
Sbjct: 262 HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLM 321
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACS 154
+E++ F +M +SG+ PD ITF+ LL + S
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 115/261 (44%), Gaps = 36/261 (13%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF--GMPQ 105
+L +CS+ L GK+ H ++ N+I+ ++ MYA CG+ +F+ + +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 106 KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC------------ 153
++ WN II + +G +A+ + KM G+ PD TF L+ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 154 --------------SHSGLVEMGRYY--FGLMSSTFG--ISPDVAHYACMVDLLGRGGFL 195
S L++ Y + S F + D + M++ + G L
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 196 G---EAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLL 251
+ S+++ + P+AV + +L C + +++G Q+ ++ G ++ + L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 252 SNMYSESQRWDDMKKIRKIMN 272
+MYS+ R+DD K+ ++M+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMS 301
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
M KN VSWNSII+ G+ +++ LF M SG+ PD T + I+SSC H+GD+
Sbjct: 603 MKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDE 662
Query: 61 GKKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGAL 118
G + + D I +++++ + G L A + MP + W ++GA
Sbjct: 663 GVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGAC 722
Query: 119 ALH 121
LH
Sbjct: 723 RLH 725
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/320 (40%), Positives = 193/320 (60%), Gaps = 1/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+W ++I + Q G + EA+ LF M G P++ TL ++LS S + L+ GK+
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 435
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALHGS 123
H + SV++ N+L+ MYAK G + +A F + +++ VSW +I ALA HG
Sbjct: 436 HGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+EA+E+FE M GL PD IT+ G+ SAC+H+GLV GR YF +M I P ++HYA
Sbjct: 496 AEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYA 555
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDL GR G L EA I+K+P++PD V WG+LL AC+ N+++GK ++LL L
Sbjct: 556 CMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE 615
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
+SG Y L+N+YS +W++ KIRK M D +KK + S IE+ + F V+D H
Sbjct: 616 NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPE 675
Query: 304 STSIYSMVDQLMDHLKSVGY 323
IY + ++ D +K +GY
Sbjct: 676 KNEIYMTMKKIWDEIKKMGY 695
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 129/309 (41%), Gaps = 68/309 (22%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLAL 60
M ++ V+WNS+IS Q G A+++F +M ++ PD TL S+LS+C+++ L +
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAM----------------------- 97
GK+ H +I +S + N+L++MY++CG ++TA
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 98 ----------DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFT 147
+IF + ++VV+W +I HGS EAI +F M G P+ T
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 148 GLLSACS-----------HSGLVEMGRYY-----------------FGLMSSTFGI---S 176
+LS S H V+ G Y S F +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDAVVWGALLGACKTFGNLEMGKQI 233
D + M+ L + G EA+ L + + M +PD + + + AC G + G+Q
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 234 LKQLLELGR 242
+ ++ +
Sbjct: 538 FDMMKDVDK 546
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 128/271 (47%), Gaps = 38/271 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P +++VSW ++I + GQ+ +A+ + M G+ P TL ++L+S + + G
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETG 165
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKC------------------------------- 90
KK H +I + +V++ NSL+NMYAKC
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 91 GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM-RASGLFPDEITFTGL 149
G + AM F M ++++V+WN +I G A+++F KM R S L PD T +
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 150 LSACSHSGLVEMGRY-YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
LSAC++ + +G+ + ++++ F IS V + ++ + R G + A LI++ K
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLN--ALISMYSRCGGVETARRLIEQRGTK 343
Query: 209 PDAVVWG--ALLGACKTFGNLEMGKQILKQL 237
D + G ALL G++ K I L
Sbjct: 344 -DLKIEGFTALLDGYIKLGDMNQAKNIFVSL 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 96/239 (40%), Gaps = 41/239 (17%)
Query: 40 PDNATLVSILSSCSHMGDLALGKK--------AHDYICDNNITVSVTLCNSLMNMYAKCG 91
P +L ++L C+++ ++ K H + + + SV L N+LMN+Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 92 ALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEK------------------ 133
A +F MP + SWN ++ A + G E F++
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 134 -------------MRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
M G+ P + T T +L++ + + +E G+ + G+ +V+
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK-LGLRGNVS 182
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++++ + G A + ++ ++ D W A++ G +++ +Q+ E
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVR-DISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 247 bits (631), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 190/318 (59%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N VSW SII+ Q G+ EA+ELF M V+GV P++ T+ S+L +C ++ L G+ H
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ ++ +V + ++L++MYAKCG + + +F MP KN+V WN ++ ++HG K
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAK 471
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E + +FE + + L PD I+FT LLSAC GL + G YF +MS +GI P + HY+CM
Sbjct: 472 EVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCM 531
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
V+LLGR G L EA LI+++P +PD+ VWGALL +C+ N+++ + ++L L +
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENP 591
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
G YVLLSN+Y+ W ++ IR M G+KK S I++ Y + DK+H
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQID 651
Query: 306 SIYSMVDQLMDHLKSVGY 323
I +D++ ++ G+
Sbjct: 652 QITEKMDEISKEMRKSGH 669
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 39/277 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P S++S+I + +++ +F RM G++PD+ L ++ C+ + +G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK--------------- 106
K+ H C + + + + S+ +MY +CG + A +F M K
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 107 --------------------NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
N+VSWN I+ G KEA+ MF+K+ G PD++T
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTV 255
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
+ +L + S ++ MGR G + G+ D + M+D+ G+ G + +SL +
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQ-GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE 314
Query: 207 MKPDAVVWGALLGACKTF---GNLEMGKQILKQLLEL 240
M V + G + LEM + +Q +EL
Sbjct: 315 MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMEL 351
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N VSWN I+S + G H EA+ +F ++ G PD T+ S+L S L +G+ H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF--FGMPQK----------------- 106
Y+ + + +++++MY K G + + +F F M +
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 107 ----------------NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
NVVSW II A +G EA+E+F +M+ +G+ P+ +T +L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
AC + + GR G + + +V + ++D+ + G + + + +P K +
Sbjct: 396 PACGNIAALGHGRSTHGF-AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-N 453
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLE 239
V W +L+ G + I + L+
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MMP KN V WNS+++ G+ E M +F + + + PD + S+LS+C +G
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
Query: 61 GKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGAL 118
G K + + I + + ++N+ + G LQ A D+ MP + + W ++ +
Sbjct: 508 GWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567
Query: 119 ALHGS 123
L +
Sbjct: 568 RLQNN 572
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 247 bits (631), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 190/322 (59%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN VSW +++ + Q G+ EA+++F M SG+ PD+ TL +S+C+++ L G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + VT+ NSL+ +Y KCG + + +F M ++ VSW ++ A A
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E I++F+KM GL PD +T TG++SACS +GLVE G+ YF LM+S +GI P + H
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+CM+DL R G L EAM I +P PDA+ W LL AC+ GNLE+GK + L+EL
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELD 570
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ Y LLS++Y+ +WD + ++R+ M + +KK S I+ G + F DD++
Sbjct: 571 PHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESS 630
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
IY+ +++L + + GY
Sbjct: 631 PYLDQIYAKLEELNNKIIDNGY 652
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 10/247 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K++VSW ++I Q G EA+E F M V G+ D S+L +C +G + GK+
Sbjct: 233 KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI 292
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I N + + ++L++MY KC L A +F M QKNVVSW ++ G
Sbjct: 293 HACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRA 352
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA+++F M+ SG+ PD T +SAC++ +E G + G I+ + HY
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK-----AITSGLIHYVT 407
Query: 185 ----MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+V L G+ G + ++ L ++ ++ DAV W A++ A FG Q+ ++++
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 241 GRYDSGL 247
G G+
Sbjct: 467 GLKPDGV 473
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 132/341 (38%), Gaps = 75/341 (21%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
+P ++ V+WN +I + G A++ + M TL+++L S G ++L
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV------------ 108
GK+ H + + + + L+ MYA G + A +F+G+ +N
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 109 ------------------VSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
VSW +I LA +G KEAIE F +M+ GL D+ F +L
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 151 SACSHSGLVEMGRYYFG-LMSSTFG-----------------------------ISPDVA 180
AC G + G+ ++ + F +V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 181 HYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ MV G+ G EA+ + +Q+ + PD G + AC +LE G Q +
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 238 LELGRYDSGL--YVLLSN----MYSESQRWDDMKKIRKIMN 272
+ SGL YV +SN +Y + DD ++ MN
Sbjct: 398 IT-----SGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 195/322 (60%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PV + V+W ++IS ++ G+ A +F +M + GV+PD T+ ++ + S + L G
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H N T + SL++MYAKCG++ A +F + N+ +WN ++ LA H
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G GKE +++F++M++ G+ PD++TF G+LSACSHSGLV + M +GI P++ H
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEH 757
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+C+ D LGR G + +A +LI+ + M+ A ++ LL AC+ G+ E GK++ +LLEL
Sbjct: 758 YSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELE 817
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DS YVLLSNMY+ + +WD+MK R +M +KK S IE+ + F+VDD+++
Sbjct: 818 PLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSN 877
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ IY V ++ +K GY
Sbjct: 878 RQTELIYRKVKDMIRDIKQEGY 899
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+WN++++ + Q + ++LF M G D+ TL ++ +C + + GK+ H Y
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + + + + +++MY KCG + A F +P + V+W +I +G + A
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+F +MR G+ PDE T L A S +E GR + + D +VD
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA-NALKLNCTNDPFVGTSLVD 661
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSG 246
+ + G + +A L +++ M + W A+L G + Q+ KQ+ LG + D
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 247 LYV-LLSNMYSESQRWDDMKKIRKIMNDSGIK 277
++ +LS + K +R + D GIK
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 114/242 (47%), Gaps = 6/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LAL 60
M ++ +SWNS+I+ Q G EA+ LF ++ G+ PD T+ S+L + S + + L+L
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 61 GKKAHDY-ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
K+ H + I NN++ S + +L++ Y++ ++ A +I F ++V+WN ++
Sbjct: 436 SKQVHVHAIKINNVSDSF-VSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAGYT 493
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G + +++F M G D+ T + C + G+ + G D+
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDL 552
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ ++D+ + G + A +P+ PD V W ++ C G E + Q+
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 240 LG 241
+G
Sbjct: 612 MG 613
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V + N +S ++ GQ++ ++ F M S V D T + +L++ + LALG++
Sbjct: 277 VSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQ 336
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + +T+ NSL+NMY K A +F M +++++SWN +I +A +G
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
EA+ +F ++ GL PD+ T T +L A S
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
DL LGK H I L N+L++MY+KCG+L A +F MP +++VSWN I+
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 117 ALALHG-----SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS 171
A A + ++A +F +R ++ +T + +L C HSG V + G +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY-AC 172
Query: 172 TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
G+ D +V++ + G + E L +++P + D V+W +L A LEMG
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA-----YLEMG 225
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQ-----HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG 56
MP ++ VSWNSI++ + Q + +A LF + V TL +L C H G
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
+ + H Y C + + +L+N+Y K G ++ +F MP ++VV WN+++
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITF 146
A G +EAI++ +SGL P+EIT
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 244 bits (622), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 190/324 (58%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSW+++I G E+ F + +G+ P+ +L +LS+CS G G
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN-VVSWNVIIGALAL 120
K H ++ + V++ N+L++MY++CG + A +F GM +K +VSW +I LA+
Sbjct: 289 KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAM 348
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G+EA+ +F +M A G+ PD I+F LL ACSH+GL+E G YF M + I P++
Sbjct: 349 HGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIE 408
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDL GR G L +A I ++P+ P A+VW LLGAC + GN+E+ +Q+ ++L EL
Sbjct: 409 HYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNEL 468
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+SG VLLSN Y+ + +W D+ IRK M IKK A S +E+ Y+F +K
Sbjct: 469 DPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKK 528
Query: 301 HEVSTSIYSMVDQLMDHLK-SVGY 323
+ + + +++ LK GY
Sbjct: 529 KGIDIEAHEKLKEIILRLKDEAGY 552
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
P+ +++++C D+A ++ I D + + T N ++ Y K G L++A I
Sbjct: 170 PNLVAWNAVITACFRGNDVAGARE----IFDKMLVRNHTSWNVMLAGYIKAGELESAKRI 225
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV 159
F MP ++ VSW+ +I +A +GS E+ F +++ +G+ P+E++ TG+LSACS SG
Sbjct: 226 FSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSF 285
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
E G+ G + G S V+ ++D+ R G + A + + + K V W +++
Sbjct: 286 EFGKILHGFVEKA-GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 220 ACKTFGNLEMGKQILKQLLELGRYDSGL 247
G E ++ ++ G G+
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 16/262 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
P +A +N+++ + + + ++ +F M G V PD+ + ++ + + L
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + + + + +L+ MY CG ++ A +F M Q N+V+WN +I A
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
A E+F+KM L + ++ +L+ +G +E + F M +S
Sbjct: 185 GNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVS---- 236
Query: 181 HYACMVDLLGRGGFLGEA---MSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ M+ + G E+ +Q+ M P+ V +L AC G+ E GK IL
Sbjct: 237 -WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK-ILHGF 294
Query: 238 LELGRYDSGLYV--LLSNMYSE 257
+E Y + V L +MYS
Sbjct: 295 VEKAGYSWIVSVNNALIDMYSR 316
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 243 bits (621), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 181/283 (63%), Gaps = 2/283 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P + SWN+II G+ EA+E+F M SG+ PD+ T+VS+ +SC +GDL+L
Sbjct: 179 PERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAF 238
Query: 63 KAHDYICDNNI--TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H + + + NSL++MY KCG + A IF M Q+NVVSW+ +I A
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAA 298
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G+ EA+E F +MR G+ P++ITF G+LSAC H GLVE G+ YF +M S F + P ++
Sbjct: 299 NGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLS 358
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY C+VDLL R G L EA +++++PMKP+ +VWG L+G C+ FG++EM + + ++EL
Sbjct: 359 HYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVEL 418
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAIS 283
++ G+YV+L+N+Y+ W D++++RK+M + K A S
Sbjct: 419 EPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 4/237 (1%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
A WN+I+ +++ +A++++ M S V+PD +L ++ + + D LGK+ H
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 67 YICDNNITVSVTLCNS-LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
V C S + +Y K G + A +F P++ + SWN IIG L G
Sbjct: 142 VAVRLGF-VGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRAN 200
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGISPDVAHYAC 184
EA+EMF M+ SGL PD+ T + ++C G + + + + ++ + D+
Sbjct: 201 EAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNS 260
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ G+ G + A + +++ + + V W +++ GN + +Q+ E G
Sbjct: 261 LIDMYGKCGRMDLASHIFEEMRQR-NVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N VSW+S+I + G EA+E F +M GV P+ T V +LS+C H G + G
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 62 KKAHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIG 116
K + + + ++ ++++ ++ G L+ A + MP K NV+ W ++G
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMG 397
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 193/326 (59%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ +SWNS+++ +VQ G++ EA+ LF +M + V P S++ +C+H+ L LGK+
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y+ ++ + ++L++MY+KCG ++ A IF M + VSW II ALHG G
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+ +FE+M+ G+ P+++ F +L+ACSH GLV+ YF M+ +G++ ++ HYA
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+ DLLGR G L EA + I K+ ++P VW LL +C NLE+ +++ +++ + +
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
G YVL+ NMY+ + RW +M K+R M G++K A S IE+ + F+ D++H
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 305 TSIYSMVDQLMDHLKSVGYPCKHSDV 330
I + +M+ ++ GY S V
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGV 631
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 119/219 (54%), Gaps = 4/219 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP K+ VS+N+II+ + Q G + +A+ + M + + PD+ TL S+L S D+
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H Y+ I V + +SL++MYAK ++ + +F + ++ +SWN ++
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDV 179
+G EA+ +F +M + + P + F+ ++ AC+H + +G+ G ++ FG + +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
A + +VD+ + G + A + ++ + D V W A++
Sbjct: 381 A--SALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAII 416
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 141/337 (41%), Gaps = 74/337 (21%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
++W S+I C + ++A+ F M SG PD+ S+L SC+ M DL G+ H +
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 68 ICDNNITVSVTLCNSLMNMYAKC---GALQTAMDIF-----------------------F 101
I + + N+LMNMYAK G+ + ++F F
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 102 G----------MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
G MP+K+VVS+N II A G ++A+ M +M + L PD T + +L
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 152 ACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR-------------------- 191
S V G+ G + GI DV + +VD+ +
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 192 -----------GGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
G EA+ L +++ +KP AV + +++ AC L +GKQ+ +
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 238 LELGRYDSGLYV--LLSNMYSESQRWDDMKKIRKIMN 272
L G + S +++ L +MYS+ +KI MN
Sbjct: 370 LR-GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V + VSW +II H G EA+ LF M GV P+ V++L++CSH+G L
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG---LV 460
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYA-------KCGALQTAMDIFFGM---PQKNVVSW 111
+A Y N V N + YA + G L+ A + M P +V W
Sbjct: 461 DEAWGYF---NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV--W 515
Query: 112 NVIIGALALHGSGKEAIEMFEKM 134
+ ++ + ++H + + A ++ EK+
Sbjct: 516 STLLSSCSVHKNLELAEKVAEKI 538
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 192/311 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN +SWNSII+ +VQ G++ A+ELF + S ++PD+ T+ SIL + + L+ G
Sbjct: 391 MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H YI + + + NSL++MYA CG L+ A F + K+VVSWN II A A+H
Sbjct: 451 REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVH 510
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ ++ +F +M AS + P++ TF LL+ACS SG+V+ G YF M +GI P + H
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 570
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CM+DL+GR G A ++++P P A +WG+LL A + ++ + + +Q+ ++
Sbjct: 571 YGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKME 630
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++G YVLL NMY+E+ RW+D+ +I+ +M GI + + S++E G + F D++H
Sbjct: 631 HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSH 690
Query: 302 EVSTSIYSMVD 312
+ IY ++D
Sbjct: 691 VATNKIYEVLD 701
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 127/238 (53%), Gaps = 12/238 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWNS+IS ++ G ++ LF M G PD + +S L +CSH+ +G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 62 KKAHDYICDNNI-TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K+ H + + I T V + S+++MY+K G + A IF GM Q+N+V+WNV+IG A
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 121 HGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G +A F+KM +GL PD IT LL A S ++E GR G + G P +
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SAILE-GRTIHGY-AMRRGFLPHM 365
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC----KTFGNLEMGKQI 233
++D+ G G L A + ++ K + + W +++ A K + LE+ +++
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQEL 422
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +A WN +I G + EA++ + RM +GV D T ++ S + + L G
Sbjct: 90 MNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEG 149
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII-GALAL 120
KK H + V +CNSL+++Y K G A +F MP++++VSWN +I G LAL
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G ++ +F++M G PD + L ACSH +MG+ + + DV
Sbjct: 210 -GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVM 268
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
++D+ + G + A + + ++ + V W ++G
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
M +N V+WN +I C+ + G+ +A F +M +G+ PD T +++L + + +
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILE 348
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H Y + L +L++MY +CG L++A IF M +KNV+SWN II A
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G A+E+F+++ S L PD T +L A + S + GR + + S +
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
+V + G L +A + +K D V W +++ A G
Sbjct: 469 -LNSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHG 511
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 194/322 (60%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ V+W+++I + E +ELF +M + PD ++V LSSC+ +G L LG
Sbjct: 273 MVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ I + ++ + N+L++MYAKCGA+ ++F M +K++V N I LA +
Sbjct: 333 EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKN 392
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G K + +F + G+ PD TF GLL C H+GL++ G +F +S + + V H
Sbjct: 393 GHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEH 452
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDL GR G L +A LI +PM+P+A+VWGALL C+ + ++ + +LK+L+ L
Sbjct: 453 YGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALE 512
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+++G YV LSN+YS RWD+ ++R +MN G+KK S IE++G ++F+ DDK+H
Sbjct: 513 PWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSH 572
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+S IY+ ++ L + ++ +G+
Sbjct: 573 PLSDKIYAKLEDLGNEMRLMGF 594
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 133/240 (55%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P ++ V+W ++ S + G+H EA++LF +M GV PD+ +V +LS+C H+GDL G
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ Y+ + + + + +L+N+YAKCG ++ A +F M +K++V+W+ +I A +
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
KE IE+F +M L PD+ + G LS+C+ G +++G + L+ ++ ++
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT-NLFM 350
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + G + + +++ K D V+ A + G++++ + Q +LG
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 2/234 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +NS+I+ V E ++LF + G+ T +L +C+ LG H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ V SL+++Y+ G L A +F +P ++VV+W + G +
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EAI++F+KM G+ PD +LSAC H G ++ G + M + + +
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE-MEMQKNSFVRTTL 253
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
V+L + G + +A S+ + ++ D V W ++ + + G ++ Q+L+
Sbjct: 254 VNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 174/285 (61%), Gaps = 2/285 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+K+ +S+NS+I+ V + E+ LF M SG+ PD TL+ +L++CSH+ L G
Sbjct: 371 LKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSS 430
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H Y + V+ ++CN+LM+MY KCG L A +F M ++++VSWN ++ +HG
Sbjct: 431 CHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGL 490
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS-TFGISPDVAHY 182
GKEA+ +F M+ +G+ PDE+T +LSACSHSGLV+ G+ F MS F + P + HY
Sbjct: 491 GKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHY 550
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
CM DLL R G+L EA + K+P +PD V G LL AC T+ N E+G ++ K++ LG
Sbjct: 551 NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGE 610
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
L VLLSN YS ++RW+D +IR I G+ K S +++
Sbjct: 611 TTESL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P N ++W+ +I + +A++L+ +M SGV P T +L +C+ + + GK
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H ++ ++ + +C +L++ YAKCG L+ A+ +F MP++++V+WN +I +LH
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 123 SGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ I +F MR GL P+ T G+ A +G + G+ G + G S D+
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHG-YCTRMGFSNDLVV 242
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
++D+ + + A + L K + V W A++G ++ ++ Q+L
Sbjct: 243 KTGILDVYAKSKCIIYARRVFD-LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 53/277 (19%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVS------ILSSCSHMGDL 58
KN V+W+++I +V+ EA E+F +M V+ DN +V+ IL C+ GDL
Sbjct: 269 KNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN----DNVAMVTPVAIGLILMGCARFGDL 324
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ G+ H Y + +T+ N++++ YAK G+L A F + K+V+S+N +I
Sbjct: 325 SGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGC 384
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH----------------------- 155
++ +E+ +F +MR SG+ PD T G+L+ACSH
Sbjct: 385 VVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNT 444
Query: 156 ------------SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL-- 201
G +++ + F M D+ + M+ G G EA+SL
Sbjct: 445 SICNALMDMYTKCGKLDVAKRVFDTMHKR-----DIVSWNTMLFGFGIHGLGKEALSLFN 499
Query: 202 -IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+Q+ + PD V A+L AC G ++ GKQ+ +
Sbjct: 500 SMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN+++ G EA+ LF M +GV PD TL++ILS+CSH G + G
Sbjct: 470 MHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEG 529
Query: 62 KKAHDYIC--DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGAL 118
K+ + + D N+ + N + ++ A+ G L A D MP + ++ ++ A
Sbjct: 530 KQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSAC 589
Query: 119 ALHGSGKEAIEMFEKMRASG 138
+ + + E+ +KM++ G
Sbjct: 590 WTYKNAELGNEVSKKMQSLG 609
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ V+WN++IS + + LF M + G+ P+ +T+V + + G L
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H Y + + + ++++YAK + A +F +KN V+W+ +IG
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS--------- 171
+ KEA E+F +M L D + ++ GL+ MG FG +S
Sbjct: 284 NEMIKEAGEVFFQM----LVNDNVAMVTPVAI----GLILMGCARFGDLSGGRCVHCYAV 335
Query: 172 TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
G D+ ++ + G L +A ++ +K D + + +L+ C
Sbjct: 336 KAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGC 384
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 192/329 (58%), Gaps = 4/329 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N VSW +I S + G A+++F +M GV P+ AT+ ++L + L GK+ H
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ N+ + +L++MY K G LQ+A++IF+G+ K++ SWN ++ A+ G G+
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGE 479
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E I F M +G+ PD ITFT +LS C +SGLV+ G YF LM S +GI P + H +CM
Sbjct: 480 EGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCM 539
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLLGR G+L EA IQ + +KPDA +WGA L +CK +LE+ + K+L L ++S
Sbjct: 540 VDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNS 599
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
Y+++ N+YS RW+D+++IR +M ++ ++ S I+ID + F + K H
Sbjct: 600 ANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEG 659
Query: 306 SIYSMVDQLMDHLKSVGY----PCKHSDV 330
IY + +L+ +K GY C H D+
Sbjct: 660 DIYFELYKLVSEMKKSGYVPDTSCIHQDI 688
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 68/308 (22%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ ++WN I+ +++ G +A+ELF M SG ++T+V +L CS+ A G
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG 108
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H Y+ + +V++CNSL+ MY++ G L+ + +F M +N+ SWN I+ +
Sbjct: 109 RQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKL 168
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE-----MGRYYF-GLMSSTFGI 175
G +AI + ++M GL PD +T+ LLS + GL + + R GL ST I
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 176 SP----------------------------DVAHYACMVDLLGRGGFLGEA--------- 198
S DV ++D+ + G+L A
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 199 -------------------------MSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
M ++K +KPDA+ W +L T G E +
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 234 LKQLLELG 241
+ ++ E G
Sbjct: 349 IGKMKEKG 356
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 4/229 (1%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+WNS++S + +G +A+ + RM ++G+ P +++ S+L + + G L LGK H Y
Sbjct: 191 VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY 250
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
I N + V + +L++MY K G L A +F M KN+V+WN ++ L+ K+A
Sbjct: 251 ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA 310
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+ +M G+ PD IT+ L S + G E G M G++P+V + +
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVSWTAIFS 369
Query: 188 LLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQI 233
+ G A+ + K+ + P+A LL L GK++
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 38/202 (18%)
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
DN+ T V+ + M Y +C +L A +F MP+++ ++WN I+ G+ ++A+E
Sbjct: 19 DNSDTRVVS---ASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVE 75
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
+F +M+ SG + T LL CS+ GR G + G+ +V+ ++ +
Sbjct: 76 LFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLESNVSMCNSLIVMY 134
Query: 190 GRG-------------------------------GFLGEAMSLIQKLP---MKPDAVVWG 215
R G++ +A+ L+ ++ +KPD V W
Sbjct: 135 SRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWN 194
Query: 216 ALLGACKTFGNLEMGKQILKQL 237
+LL + G + +LK++
Sbjct: 195 SLLSGYASKGLSKDAIAVLKRM 216
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 190/320 (59%), Gaps = 1/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLALGKK 63
K A SW+S++S G +E + LF MC + + + + +VS L +C++ G L LG
Sbjct: 196 KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H ++ N +++ + SL++MY KCG L A+ IF M ++N ++++ +I LALHG
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE 315
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G+ A+ MF KM GL PD + + +L+ACSHSGLV+ GR F M + P HY
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG 375
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
C+VDLLGR G L EA+ IQ +P++ + V+W L C+ N+E+G+ ++LL+L +
Sbjct: 376 CLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSH 435
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
+ G Y+L+SN+YS+ Q WDD+ + R + G+K+ S +E+ G ++F+ D++H
Sbjct: 436 NPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPK 495
Query: 304 STSIYSMVDQLMDHLKSVGY 323
IY M+ Q+ LK GY
Sbjct: 496 CKEIYKMLHQMEWQLKFEGY 515
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 36/270 (13%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+N++I +V EA+ + M G PDN T +L +C+ + + GK+ H +
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ V + NSL+NMY +CG ++ + +F + K SW+ ++ A A G E +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 130 MFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+F M + L +E L AC+++G + +G G + ++ +VD+
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNIS-ELNIIVQTSLVDM 278
Query: 189 LGRGGFLGEAMSLIQKLP----------------------------------MKPDAVVW 214
+ G L +A+ + QK+ ++PD VV+
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGRYD 244
++L AC G ++ G+++ ++L+ G+ +
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVE 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N ++++++IS G+ A+ +F +M G+ PD+ VS+L++CSH G + G
Sbjct: 295 MEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEG 354
Query: 62 KKAH-DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVII 115
++ + + + + + L+++ + G L+ A++ +P +KN V W +
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 199/313 (63%), Gaps = 4/313 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDN-ATLVSILSSCSHMGDLAL 60
M ++ V+W+S+I +V+ G++ +A+E+F +M G N T+VS++ +C+H+G L
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF--GMPQKNVVSWNVIIGAL 118
GK H YI D ++ ++V L SL++MYAKCG++ A +F+ + + + + WN IIG L
Sbjct: 260 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGL 319
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A HG +E++++F KMR S + PDEITF LL+ACSH GLV+ ++F + + G P
Sbjct: 320 ASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPK 378
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HYACMVD+L R G + +A I ++P+KP + GALL C GNLE+ + + K+L+
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLI 438
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
EL ++ G YV L+N+Y+ ++++ + +R+ M G+KK S +++DG ++F+ D
Sbjct: 439 ELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHD 498
Query: 299 KNHEVSTSIYSMV 311
K H S IY+++
Sbjct: 499 KTHFHSDKIYAVL 511
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 119/263 (45%), Gaps = 34/263 (12%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN +I +++ ++ +M G++PD+ T ++ S S + + LG H +
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 70 DNNITVSVTLCNSLMNM-------------------------------YAKCGALQTAMD 98
+ + + +CN+L++M YAK G + +A
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEK-MRASGLFPDEITFTGLLSACSHSG 157
+F M +++VV+W+ +I G +A+E+F++ MR +E+T ++ AC+H G
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK-PDAVVWGA 216
+ G+ + + V ++D+ + G +G+A S+ + +K DA++W A
Sbjct: 256 ALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 217 LLGACKTFGNLEMGKQILKQLLE 239
++G + G + Q+ ++ E
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRE 337
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 241 bits (614), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 192/320 (60%), Gaps = 1/320 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M VK+ V WNS+ + +VQ+ ++ EA+ LF + +S PD T +++++ ++ + LG
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG 574
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + + + N+L++MYAKCG+ + A F ++VV WN +I + A H
Sbjct: 575 QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANH 634
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G GK+A++M EKM + G+ P+ ITF G+LSACSH+GLVE G F LM FGI P+ H
Sbjct: 635 GEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEH 693
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMV LLGR G L +A LI+K+P KP A+VW +LL C GN+E+ + + +
Sbjct: 694 YVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSD 753
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
DSG + +LSN+Y+ W + KK+R+ M G+ K S I I+ + F+ DK+H
Sbjct: 754 PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSH 813
Query: 302 EVSTSIYSMVDQLMDHLKSV 321
+ IY ++D L+ ++ V
Sbjct: 814 CKANQIYEVLDDLLVQIRGV 833
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 5/221 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SW +++S + Q H EAMELF M G+ PD SIL+SC+ + L G
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y N+ + NSL++MYAKC L A +F +VV +N +I +
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 122 GSG---KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G+ EA+ +F MR + P +TF LL A + + + + GLM +G++ D
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLD 488
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+ + ++D+ L ++ + ++ +K D V+W ++
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFA 528
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 89/153 (58%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ V+W ++IS V+ G+ +++LF ++ V+PD L ++LS+CS + L G
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H +I + + +L N L++ Y KCG + A +F GMP KN++SW ++ +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
KEA+E+F M GL PD + +L++C+
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 146/341 (42%), Gaps = 40/341 (11%)
Query: 6 NAVSWNSIISCHVQEGQH---AEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
+ V +N++I + + G EA+ +F M + P T VS+L + + + L L K
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H + + + + ++L+++Y+ C L+ + +F M K++V WN +
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTFGI- 175
+EA+ +F +++ S PDE TF +++A + V++G+ + GL + +
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 176 ----------SPDVAHYA----------CMVDLLGRGGFLGEAMSLIQKLP------MKP 209
SP+ AH A C ++ GE +Q L ++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 210 DAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIR 268
+ + + +L AC G +E G + + +L G ++ YV + ++ + R + K R
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGR---LNKAR 711
Query: 269 KIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIYS 309
+++ K + + GC V+ H +I S
Sbjct: 712 ELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILS 752
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + + L N L+N+Y++ G + A +F MP++N+VSW+ ++ A HG
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 125 KEAIEMF-EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF---GISPDVA 180
+E++ +F E R P+E + + AC SGL GR+ + S G DV
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D + G + A + LP K V W ++ C G + Q+ QL+E
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%), Gaps = 5/224 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLA- 59
MP +N VSW++++S G + E++ +F + P+ L S + +CS +
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 60 -LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ + ++ + V + L++ Y K G + A +F +P+K+ V+W +I
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G ++++F ++ + PD + +LSACS +E G+ + +G+ D
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMD 283
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACK 222
+ ++D + G + A L +P K + + W LL K
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLLSGYK 326
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 241 bits (614), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 188/322 (58%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN +SW +IS + G E ++LF M G P + + SC+ +G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + S++ N+L+ MYAKCG ++ A +F MP + VSWN +I AL H
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G EA++++E+M G+ PD IT +L+ACSH+GLV+ GR YF M + + I P H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YA ++DLL R G +A S+I+ LP KP A +W ALL C+ GN+E+G +L L
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G Y+LLSNM++ + +W+++ ++RK+M D G+KK A S IE++ + F+VDD +H
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ ++Y + L ++ +GY
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGY 698
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 34/265 (12%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V++N++IS +V G + EA+E+ RM SG+ D T S++ +C+ G L LGK+ H Y
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----------------------- 104
+ S NSL+++Y KCG A IF MP
Sbjct: 312 VLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 105 --------QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
+KN++SW ++I LA +G G+E +++F M+ G P + F+G + +C+
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 157 GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
G G+ Y + G ++ ++ + + G + EA + + +P D+V W A
Sbjct: 431 GAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNA 488
Query: 217 LLGACKTFGNLEMGKQILKQLLELG 241
L+ A G+ + +++L+ G
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKG 513
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 44/275 (16%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG-K 62
+++ V +N++I+ A+ LFC+M G PDN T S+L+ + + D
Sbjct: 110 MRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCV 169
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGA----LQTAMDIFFGMPQKNVVSW------- 111
+ H + ++ N+L+++Y+KC + L +A +F + +K+ SW
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 112 -------------------------NVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
N +I G +EA+EM +M +SG+ DE T+
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 147 TGLLSACSHSGLVEMGR--YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
++ AC+ +GL+++G+ + + L F D + +V L + G EA ++ +K
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS----LVSLYYKCGKFDEARAIFEK 345
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+P K D V W ALL + G++ K I K++ E
Sbjct: 346 MPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 194/323 (60%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLAL 60
M VK+ +SWN+II + + EA+ LF + PD T+ +L +C+ +
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H YI N + NSL++MYAKCGAL A +F + K++VSW V+I +
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG GKEAI +F +MR +G+ DEI+F LL ACSHSGLV+ G +F +M I P V
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYAC+VD+L R G L +A I+ +P+ PDA +WGALL C+ ++++ +++ +++ EL
Sbjct: 638 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
++G YVL++N+Y+E+++W+ +K++RK + G++K S IEI G F+ D +
Sbjct: 698 EPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSS 757
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
+ + +I + + ++ + GY
Sbjct: 758 NPETENIEAFLRKVRARMIEEGY 780
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 126/243 (51%), Gaps = 4/243 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +SWNSII+ +V G + + +F +M VSG+ D AT+VS+ + C+ ++LG
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + CN+L++MY+KCG L +A +F M ++VVS+ +I A
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGISPDVA 180
G EA+++FE+M G+ PD T T +L+ C+ L++ G R + + + G D+
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--DIF 433
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
++D+ + G + EA + ++ +K D + W ++G + LLE
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSLFNLLLEE 492
Query: 241 GRY 243
R+
Sbjct: 493 KRF 495
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 127/242 (52%), Gaps = 5/242 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VS+ S+I+ + +EG EA++LF M G+ PD T+ ++L+ C+ L G
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H++I +N++ + + N+LM+MYAKCG++Q A +F M K+++SWN IIG + +
Sbjct: 417 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 476
Query: 122 GSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDV 179
EA+ +F + F PDE T +L AC+ + GR G +M + + V
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV 536
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
A+ +VD+ + G L A L + K D V W ++ G + + Q+ +
Sbjct: 537 AN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 593
Query: 240 LG 241
G
Sbjct: 594 AG 595
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 36/285 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ ++ A+ WN +++ + G + ++ LF +M SGV D+ T + S S + + G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H +I + ++ NSL+ Y K + +A +F M +++V+SWN II +
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL------------- 168
G ++ + +F +M SG+ D T + + C+ S L+ +GR +
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 169 ---------------MSSTFGISPD--VAHYACMVDLLGRGGFLGEAMSLIQKLP---MK 208
+ F D V Y M+ R G GEA+ L +++ +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSN 253
PD A+L C + L+ GK++ + + E D G + +SN
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKE---NDLGFDIFVSN 436
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 8/233 (3%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMP-DNATLVSILSSCSHMGDLALGKKAHDYIC 69
N+ + + G A++L +CVSG D TL S+L C+ L GK+ ++I
Sbjct: 65 NTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIR 121
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
N + L + L MY CG L+ A +F + + + WN+++ LA G +I
Sbjct: 122 GNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIG 181
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYACMVDL 188
+F+KM +SG+ D TF+ + + S V G G ++ S FG V + +V
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN--SLVAF 239
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + A + ++ + D + W +++ + G E G + Q+L G
Sbjct: 240 YLKNQRVDSARKVFDEMTER-DVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 186/318 (58%), Gaps = 7/318 (2%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M + VSW +IS + ++G EA+ LF M SG PD TL+S++S C G L
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 61 GK----KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
GK +A Y C + +V +CN+L++MY+KCG++ A DIF P+K VV+W +I
Sbjct: 376 GKWIDARADIYGCKRD---NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 432
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
AL+G EA+++F KM P+ ITF +L AC+HSG +E G YF +M + IS
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 492
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
P + HY+CMVDLLGR G L EA+ LI+ + KPDA +WGALL ACK N+++ +Q +
Sbjct: 493 PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAES 552
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
L L + YV ++N+Y+ + WD +IR IM IKK S I+++G + F V
Sbjct: 553 LFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTV 612
Query: 297 DDKNHEVSTSIYSMVDQL 314
+ H + IY ++ L
Sbjct: 613 GEHGHVENEVIYFTLNGL 630
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 45/272 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++A +WN+++S Q G +A LF M ++ + PD+ T+++++ S S L L
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLL 172
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ--KNVVSWNVIIGALA 119
+ H + V VT+ N+ ++ Y KCG L +A +F + + + VVSWN + A +
Sbjct: 173 EAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS 232
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMG------ 162
+ G +A ++ M PD TF L ++C HS + +G
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIE 292
Query: 163 ------------------RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ- 203
R F +M+S +S + M+ G + EA++L
Sbjct: 293 AINTFISMYSKSEDTCSARLLFDIMTSRTCVS-----WTVMISGYAEKGDMDEALALFHA 347
Query: 204 --KLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
K KPD V +L+ C FG+LE GK I
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 96/220 (43%), Gaps = 6/220 (2%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+WN I V E++ LF M G P+N T + +C+ + D+ + H ++
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ V + + ++M+ KC ++ A +F MP+++ +WN ++ G +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEM--GRYYFGLMSSTFGISPDVAHYACMV 186
+F +MR + + PD +T L+ + S +++ + G+ G+ V +
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI---RLGVDVQVTVANTWI 195
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVV-WGALLGACKTFG 225
G+ G L A + + + VV W ++ A FG
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/323 (36%), Positives = 194/323 (60%), Gaps = 6/323 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++ SWN++I+ V + +EAMEL+ RM G+ T+V+ L +CSH+GD+ G
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
+ ++N+ VS N+ ++MY+KCG + A +F +K+VV+WN +I A+
Sbjct: 230 ENIFHGYSNDNVIVS----NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG A+E+F+K+ +G+ PD++++ L+AC H+GLVE G F M+ G+ ++
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMK 344
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY C+VDLL R G L EA +I + M PD V+W +LLGA + + ++EM + +++ E+
Sbjct: 345 HYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEM 404
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
G + G +VLLSN+Y+ RW D+ ++R M +KK +S IE G ++F DK+
Sbjct: 405 GVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKS 464
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
HE IY +D++ ++ GY
Sbjct: 465 HEQWREIYEKIDEIRFKIREDGY 487
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I ++ LC +L++ Y+K G L +A +F MP ++V SWN +I L
Sbjct: 132 HCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRA 191
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+E++++M G+ E+T L ACSH G V+ G F S+ I + A
Sbjct: 192 SEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAA---- 247
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+D+ + GF+ +A + ++ K V W ++ G +I +L + G
Sbjct: 248 -IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG 303
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 189/319 (59%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN V+WN++IS +V+ + + ++LF M G+ P+++ L S L CS + L LG++
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + VT SL++MY KCG L A +F M +K+VV+WN +I A HG+
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A+ +F +M + + PD ITF +L AC+H+GLV +G YF M + + P HY C
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC 426
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G L EA+ LI+ +P +P A V+G LLGAC+ N+E+ + ++LL+L +
Sbjct: 427 MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQN 486
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+ YV L+N+Y+ RW+D+ ++RK M +S + K S IEI + F D+ H
Sbjct: 487 AAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPEL 546
Query: 305 TSIYSMVDQLMDHLKSVGY 323
SI+ + +L +K GY
Sbjct: 547 DSIHKKLKELEKKMKLAGY 565
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M K+ V+WN++IS + Q G +A+ LF M + + PD T V++L +C+H G + +
Sbjct: 344 VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNI 403
Query: 61 GKKAHD-YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGAL 118
G + + D + ++++ + G L+ A+ + MP + + + ++GA
Sbjct: 404 GMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGAC 463
Query: 119 ALHGSGKEAIEMFEKM 134
+H + + A EK+
Sbjct: 464 RVHKNVELAEFAAEKL 479
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 137/312 (43%), Gaps = 32/312 (10%)
Query: 2 MPVKNAVSWNSI-ISCHVQEGQHAEAMELFCRMCVSGVMPDNATL-VSILSSCSHMGDLA 59
M KN ++WNS+ I + EA +LF +P+ T +I+ SC ++ ++
Sbjct: 87 MRAKNTITWNSLLIGISKDPSRMMEAHQLF------DEIPEPDTFSYNIMLSC-YVRNVN 139
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+KA + D N+++ YA+ G ++ A ++F+ M +KN VSWN +I
Sbjct: 140 F-EKAQSFF-DRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYI 197
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G ++A F+ G+ + +T +++ + VE+ F M+ ++ ++
Sbjct: 198 ECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMT----VNKNL 249
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
+ M+ + + L + + ++P++ + L C L++G+QI Q
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI-HQ 308
Query: 237 LLELGRYDSGLYVLLS--NMYSESQRWDDMKKIRKIMNDSGIKKCRA-ISSIEIDG---- 289
++ + + L S +MY + D K+ ++M + A IS G
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 368
Query: 290 --CCYQFMVDDK 299
C ++ M+D+K
Sbjct: 369 ALCLFREMIDNK 380
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 197/324 (60%), Gaps = 3/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ ++WN++IS ++ +EA+ +F R G +P+ T S++++C+++ L G
Sbjct: 274 MEDKDLITWNTLIS-ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCG 332
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM-PQKNVVSWNVIIGALAL 120
++ H I +V L N+L++MYAKCG + + +F + ++N+VSW ++
Sbjct: 333 QQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGS 392
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G EA+E+F+KM +SG+ PD I F +LSAC H+GLVE G YF +M S +GI+PD
Sbjct: 393 HGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRD 452
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG-NLEMGKQILKQLLE 239
Y C+VDLLGR G +GEA L++++P KPD WGA+LGACK N + + ++++E
Sbjct: 453 IYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVME 512
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L G YV+LS +Y+ +W D ++RK+M G KK +S I ++ + F V DK
Sbjct: 513 LKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDK 572
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
++S+YS++ L++ + GY
Sbjct: 573 MCPNASSVYSVLGLLIEETREAGY 596
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 35/263 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ VKN V+W ++I+ G ++++ +M + + + + + + + G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + ++ + NS++++Y +CG L A F M K++++WN +I L
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS 292
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL------------- 168
S EA+ MF++ + G P+ TFT L++AC++ + G+ G
Sbjct: 293 DSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 169 -----MSSTFGISPD-------------VAHYACMVDLLGRGGFLGEAMSLIQKLP---M 207
M + G PD + + M+ G G+ EA+ L K+ +
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 208 KPDAVVWGALLGACKTFGNLEMG 230
+PD +V+ A+L AC+ G +E G
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKG 434
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 7/220 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V+W ++I+ + +A A E F M G P+ TL S+L SC +M LA G
Sbjct: 71 MPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG 130
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCG-ALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H + + S+ + N++MNMYA C ++ A IF + KN V+W +I
Sbjct: 131 ALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTH 190
Query: 121 HGSGKEAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G G ++M+++M + + P IT SA S V G+ + G +
Sbjct: 191 LGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS--VTTGKQIHASVIKR-GFQSN 247
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ ++DL R G+L EA ++ K D + W L+
Sbjct: 248 LPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNTLI 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 79 LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG 138
L +L+ Y + G ++ A +F MP ++VV+W +I A A E F +M G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEA 198
P+E T + +L +C + ++ G G++ G+ + M+++ EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK-LGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 199 MSLIQKLPMKPDAVVWGALLGACKTFGN----LEMGKQILKQLLELGRY 243
LI + + V W L+ G+ L+M KQ+L + E+ Y
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPY 214
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 237 bits (604), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 190/323 (58%), Gaps = 3/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLAL 60
MP +N VSWN++I + Q Q E + LF M + + PD+ T++S+L + S G L+L
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H ++ + V +C ++++MY+KCG ++ A IF MP+K V SWN +I AL
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G+ + A+++F M PDEIT +++AC+H GLVE GR +F +M G++ +
Sbjct: 353 NGNARAALDLFVTMMIEEK-PDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIE 410
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLLGR G L EA LI +P +P+ ++ + L AC + ++E ++ILK+ +EL
Sbjct: 411 HYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVEL 470
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ G YVLL N+Y+ +RWDD ++ +M + KK S IEI+ +F+ D
Sbjct: 471 EPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTT 530
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H SI+ ++ L+ H+ Y
Sbjct: 531 HPHRRSIHLVLGDLLMHMNEEKY 553
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ VSW ++IS +++ G+ A +LF +M V V+ NA + + S GD+
Sbjct: 139 MPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKS----GDMTS 194
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
++ D + + T+ + Y + A +F MP++N+VSWN +IG
Sbjct: 195 ARRLFDEMTHKTVITWTTMIHG----YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQ 250
Query: 121 HGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ +E I +F++M+A + L PD++T +L A S +G + +G + + + V
Sbjct: 251 NKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK-KLDKKV 309
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
++D+ + G + +A + ++P K A W A++ GN
Sbjct: 310 KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVA-SWNAMIHGYALNGN 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 100/244 (40%), Gaps = 12/244 (4%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLALGKKAHDYIC 69
NS+I +++ Q+ ++ L+ + PDN T ++ SCS + G + H I
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + +++MYAK G + A + F MP ++ VSW +I G A +
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS-PDVAHYACMVDL 188
+F++M D + + ++ SG + R F M+ I+ + H C +
Sbjct: 166 LFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKD 222
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLY 248
+ L +AM + + V W ++G + G ++ +++ D
Sbjct: 223 IDAARKLFDAMP-------ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDV 275
Query: 249 VLLS 252
+LS
Sbjct: 276 TILS 279
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 237 bits (604), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 197/334 (58%), Gaps = 12/334 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-----------CVSGVMPDNATLVSILS 50
M ++ V+WN++I+ +V H +A+ L +M + P++ TL++IL
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 51 SCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS 110
SC+ + LA GK+ H Y NN+ V + ++L++MYAKCG LQ + +F +PQKNV++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 111 WNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS 170
WNVII A +HG+G+EAI++ M G+ P+E+TF + +ACSHSG+V+ G F +M
Sbjct: 586 WNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Query: 171 STFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD-AVVWGALLGACKTFGNLEM 229
+G+ P HYAC+VDLLGR G + EA L+ +P + A W +LLGA + NLE+
Sbjct: 646 PDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEI 705
Query: 230 GKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDG 289
G+ + L++L + YVLL+N+YS + WD ++R+ M + G++K S IE
Sbjct: 706 GEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGD 765
Query: 290 CCYQFMVDDKNHEVSTSIYSMVDQLMDHLKSVGY 323
++F+ D +H S + ++ L + ++ GY
Sbjct: 766 EVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WN+++S Q Q EA+E M + GV PD T+ S+L +CSH+ L GK+
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 65 HDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H Y N ++ + + ++L++MY C + + +F GM + + WN +I + +
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 124 GKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
KEA+ +F M S GL + T G++ AC SG G + G+ D
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQ 443
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++D+ R G + AM + K+ + D V W ++
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 38/284 (13%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
W ++ V+ EA+ + M V G+ PDN ++L + + + D+ LGK+ H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 70 DNNITV-SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
V SVT+ N+L+N+Y KCG +F + ++N VSWN +I +L + A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVE---MGR--YYFGLMS---STFGISPDVA 180
E F M + P T +++ACS+ + E MG+ + +GL ++F I+ VA
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 181 HYACMVDLLGRGGFLG------------------------EAMSLIQKLPM---KPDAVV 213
Y + L LG EA+ ++++ + +PD
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 214 WGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMY 255
++L AC L GK++ L+ G D +V L +MY
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG---DLALG 61
+N VSWNS+IS + A+E F M V P + TLVS++++CS++ L +G
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y ++ + N+L+ MY K G L ++ + +++V+WN ++ +L +
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
EA+E +M G+ PDE T + +L ACSH ++ G+
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 14/244 (5%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
WN++I+ + Q EA+ LF M S G++ ++ T+ ++ +C G + + H ++
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + N+LM+MY++ G + AM IF M +++V+WN +I ++A+
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 129 EMFEKMR-----------ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+ KM+ L P+ IT +L +C+ + G+ ++
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLAT 550
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
DVA + +VD+ + G L + + ++P K + + W ++ A GN + +L+ +
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 238 LELG 241
+ G
Sbjct: 610 MVQG 613
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 187/316 (59%), Gaps = 1/316 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V W ++S H Q G + EA++ + M GV+PD AT V++L CS + L G+
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALALHGS 123
H I + N+L++MYAKCG ++ + +F M ++ NVVSWN +I A +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
++A+++F+ MR S + PDEITF G+L+ACSH+G V GR F +M +GI V H A
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDLLGR G+L EA I+ +KPDA +W +LLGAC+ G+ G+ ++L+EL
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
+S YVLLSN+Y+ W+ +RK+M D G+KK S I+++ + F DK+H
Sbjct: 935 NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994
Query: 304 STSIYSMVDQLMDHLK 319
I ++ L D +K
Sbjct: 995 IGKIEMFLEDLYDLMK 1010
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN V WN++I + G+ + MELF M SG D+ T S+LS+C+ DL +G +
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + ++ + N+L++MYAKCGAL+ A IF M ++ V+WN IIG+ +
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA ++F++M G+ D L AC+H + G+ L S G+ D+ +
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL-SVKCGLDRDLHTGSS 569
Query: 185 MVDLLGRGGFLGEAMSLIQKLP---------------------------------MKPDA 211
++D+ + G + +A + LP + P
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSE 629
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLS--NMYSESQ 259
+ + ++ AC +L +G Q Q+ + G G Y+ +S MY S+
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 126/242 (52%), Gaps = 11/242 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WN+II +VQ+ +EA +LF RM + G++ D A L S L +C+H+ L GK+
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + +SL++MY+KCG ++ A +F +P+ +VVS N +I + +
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNL 610
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA+ +F++M G+ P EITF ++ AC + +G + G ++ G S + +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLG- 668
Query: 185 MVDLLG-----RGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ LLG RG + EA +L +L V+W ++ G E + K++
Sbjct: 669 -ISLLGMYMNSRG--MTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 240 LG 241
G
Sbjct: 726 DG 727
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 117/219 (53%), Gaps = 2/219 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + V+WN +IS H + G A+E F M S V +TL S+LS+ + +L LG
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + ++ + +SL++MY+KC ++ A +F + +KN V WN +I A +
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + +E+F M++SG D+ TFT LLS C+ S +EMG + ++ ++ ++
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFV 465
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+VD+ + G L +A + +++ + D V W ++G+
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDR-DNVTWNTIIGS 503
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 132/274 (48%), Gaps = 11/274 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +WNS++S + G+ + + F + + + P+ T +LS+C+ ++ G++
Sbjct: 123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQI 182
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + +L++MYAKC + A +F + N V W + G
Sbjct: 183 HCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLP 242
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA+ +FE+MR G PD + F +++ G ++ R FG MS SPDV +
Sbjct: 243 EEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNV 297
Query: 185 MVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
M+ G+ G A+ ++K +K G++L A NL++G + + ++LG
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 242 RYDSGLYV--LLSNMYSESQRWDDMKKIRKIMND 273
S +YV L +MYS+ ++ + K+ + + +
Sbjct: 358 -LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
L +GK H I L N+++++YAKC + A + F +K+V +WN ++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYA-EKQFDFLEKDVTAWNSMLSM 134
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+ G + + F + + +FP++ TF+ +LS C+ VE GR M G+
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLER 193
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ +VD+ + + +A + + + + P+ V W L G E + +++
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 238 LELG-RYDSGLYVLLSNMY 255
+ G R D +V + N Y
Sbjct: 253 RDEGHRPDHLAFVTVINTY 271
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 190/307 (61%), Gaps = 3/307 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ V++NS+++ +VQ H EA+E+F M S ++PD+ TLV +L + + +G L+
Sbjct: 309 MPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H YI + + L +L++MY+KCG++Q AM +F G+ K++ WN +IG LA+
Sbjct: 369 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 428
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G+ A +M ++ L PD+ITF G+L+ACSHSGLV+ G F LM I P +
Sbjct: 429 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 488
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVD+L R G + A +LI+++P++P+ V+W L AC E G+ + K L+
Sbjct: 489 HYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 548
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
Y+ YVLLSNMY+ W D++++R +M + I+K S IE+DG ++F VD +
Sbjct: 549 AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFVD--S 606
Query: 301 HEVSTSI 307
EVS+++
Sbjct: 607 IEVSSTL 613
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 13/275 (4%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V++ WN++I H +A+ L C M +GV D +L +L +CS +G + G +
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H ++ + + L N L+ +Y KCG L + +F MP+++ VS+N +I G
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSH-SGLVEMGRYYFGLMSSTFGISPDVAHY 182
A E+F+ M + I++ ++S + S V++ F M D+ +
Sbjct: 203 IVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEK-----DLISW 255
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL--LEL 240
M+D + G + +A L +P + D V W ++ G + K + Q+ ++
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRR-DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 241 GRYDSGLYVLLSNMYSES--QRWDDMKKIRKIMND 273
Y+S + + N Y + + DM+K ++ D
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPD 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 75/264 (28%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ +SWNS+I +V+ G+ +A LF VMP
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLF------DVMPRR------------------- 281
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
V ++++ YAK G + A +F MP ++VV++N ++ +
Sbjct: 282 --------------DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQN 327
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSG-----------LVEMGRYYFGLM 169
EA+E+F M + S L PD+ T +L A + G +VE Y G +
Sbjct: 328 KYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKL 387
Query: 170 SSTF------------------GI-SPDVAHYACMVDLLGRGGFLGEA----MSLIQKLP 206
GI + + H+ M+ L G LGE+ + I++L
Sbjct: 388 GVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG-LGESAFDMLLQIERLS 446
Query: 207 MKPDAVVWGALLGACKTFGNLEMG 230
+KPD + + +L AC G ++ G
Sbjct: 447 LKPDDITFVGVLNACSHSGLVKEG 470
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 178/297 (59%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ W S+IS +VQ + EA+ L+ RM +G++P++ T+ S+L +CS + L LGK+
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + V + ++L MY+KCG+L+ +F P K+VVSWN +I L+ +G G
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQG 505
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+E+FE+M A G+ PD++TF ++SACSH G VE G +YF +MS G+ P V HYAC
Sbjct: 506 DEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYAC 565
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLL R G L EA I+ + +W LL ACK G E+G ++L+ LG +
Sbjct: 566 MVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRE 625
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
S YV LS +Y+ R D++++ K M +G+ K S IE+ + F+V D H
Sbjct: 626 SSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMH 682
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 125/238 (52%), Gaps = 4/238 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N+++W+++++ + Q G+ EA++LF RM +G+ P T+V +L++CS + L GK+
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ + +L++MYAK G L A F + +++V W +I +
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYA 183
+EA+ ++ +M+ +G+ P++ T +L ACS +E+G+ G + FG+ + +
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--S 462
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + + G L + + ++ P K D V W A++ G + ++ +++L G
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 48/304 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAME---LFCRMCVSGVMPDNATLVSILSSCSHMGDL 58
MP +N +W++++S + G+ EA++ LF R G D ++LSS + +
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYV 237
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
LG++ H N + V L N+L+ MY+KC +L A +F +N ++W+ ++
Sbjct: 238 GLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGY 297
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY------FGLMSST 172
+ +G EA+++F +M ++G+ P E T G+L+ACS +E G+ G
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHL 357
Query: 173 FGISPDVAHYA---CMVDLLGRGGF-----------------------LGEAMSLIQKLP 206
F + V YA C+ D R GF EA+ L +++
Sbjct: 358 FATTALVDMYAKAGCLAD--ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 207 MK---PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV----LLSNMYSESQ 259
P+ ++L AC + LE+GKQ+ ++ G GL V LS MYS+
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG---FGLEVPIGSALSTMYSKCG 472
Query: 260 RWDD 263
+D
Sbjct: 473 SLED 476
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 43/303 (14%)
Query: 5 KNAVSWNSIISCHVQEGQHAEA---MELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
K+ VSWNS+I+ + Q G + + M+LF M ++P+ TL I + S + +G
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++AH + + + + SL+ MY K G ++ + +F MP++N +W+ ++ A
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 122 GSGKEAIEMFE---KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMS-- 170
G +EAI++F + + G D + FT +LS+ + + V +GR GL+
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 171 --------------------STFGISPDVAH--YACMVDLLGRGGFLGEAMSLIQKL--- 205
F S D ++ MV + G EA+ L ++
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWDD 263
+KP +L AC LE GKQ+ LL+LG ++ L+ L +MY+++ D
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG-FERHLFATTALVDMYAKAGCLAD 375
Query: 264 MKK 266
+K
Sbjct: 376 ARK 378
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 9/205 (4%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
P +TL+ L+ S +L G+ H I + + N L+N YAKCG L A I
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 100 FFGMPQKNVVSWNVIIGALALHG---SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
F + K+VVSWN +I + +G S +++F +MRA + P+ T G+ A S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 157 GLVEMGRYYFGLMS--STFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
+GR L+ S+FG D+ +V + + G + + + + +P + + W
Sbjct: 132 QSSTVGRQAHALVVKMSSFG---DIYVDTSLVGMYCKAGLVEDGLKVFAYMPER-NTYTW 187
Query: 215 GALLGACKTFGNLEMGKQILKQLLE 239
++ T G +E ++ L
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLR 212
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K+ VSWN++IS GQ EA+ELF M G+ PD+ T V+I+S+CSH G + G
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW 544
Query: 63 KAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMD-IFFGMPQKNVVSWNVIIGALAL 120
+ + D + V ++++ ++ G L+ A + I + W +++ A
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKN 604
Query: 121 HGSGKEAIEMFEKMRASG 138
HG + + EK+ A G
Sbjct: 605 HGKCELGVYAGEKLMALG 622
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 182/321 (56%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K+ SWN++IS + Q G +A+ LF M S P+ T+ ILS+C+ +G L+LGK
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
HD + + S+ + +L+ MYAKCG++ A +F M +KN V+WN +I LHG
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG 500
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
G+EA+ +F +M SG+ P +TF +L ACSH+GLV+ G F M +G P V HY
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
ACMVD+LGR G L A+ I+ + ++P + VW LLGAC+ + + + + ++L EL
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDP 620
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHE 302
+ G +VLLSN++S + + +R+ + K + IEI + F D++H
Sbjct: 621 DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHP 680
Query: 303 VSTSIYSMVDQLMDHLKSVGY 323
IY +++L ++ GY
Sbjct: 681 QVKEIYEKLEKLEGKMREAGY 701
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 5/234 (2%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V++N++I + G+ ++ LF + +SG ++TLVS++ H L L H Y
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHGY 344
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+N ++ +L +Y+K +++A +F P+K++ SWN +I +G ++A
Sbjct: 345 CLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
I +F +M+ S P+ +T T +LSAC+ G + +G++ L+ ST + ++
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST-DFESSIYVSTALIG 463
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + G + EA L L K + V W ++ G + I ++L G
Sbjct: 464 MYAKCGSIAEARRLFD-LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 130/304 (42%), Gaps = 34/304 (11%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
MP K+ + WN++IS + + + E++++F + S D TL+ IL + + + +L L
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + +++Y+KCG ++ +F + ++V++N +I
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS 299
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV--------------------E 160
+G + ++ +F+++ SG T L+ H L+
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTA 359
Query: 161 MGRYYFGL-----MSSTFGISPD--VAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPD 210
+ Y L F SP+ + + M+ + G +A+SL +QK P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKKIR 268
V +L AC G L +GK + L+ ++S +YV L MY++ + +++
Sbjct: 420 PVTITCILSACAQLGALSLGKWV-HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF 478
Query: 269 KIMN 272
+M
Sbjct: 479 DLMT 482
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M KN V+WN++IS + GQ EA+ +F M SG+ P T + +L +CSH G +
Sbjct: 480 LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKE 539
Query: 61 GKKAHD-YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM---PQKNVVSWNVIIG 116
G + + I SV ++++ + G LQ A+ M P +V W ++G
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV--WETLLG 597
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
A +H A + EK+ L PD + + LLS
Sbjct: 598 ACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 18 VQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVS 76
V E H+ ++ +F + S + P+++T +S+ S D G+ H +
Sbjct: 95 VNESPHS-SLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 77 VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM-R 135
+ L ++++ MY K ++ A +F MP+K+ + WN +I + E+I++F +
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 136 ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFL 195
S D T +L A + + +G L + T S D + L + G +
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV-LTGFISLYSKCGKI 272
Query: 196 GEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+L ++ KPD V + A++ + G E+ + K+L+
Sbjct: 273 KMGSALFREF-RKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 178/280 (63%), Gaps = 6/280 (2%)
Query: 9 SWNSIISCHVQEGQ---HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+WN++++ + + E + LF RM V P+ +LV+++ SC+++G+ G AH
Sbjct: 183 TWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAH 239
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y+ NN+T++ + SL+++Y+KCG L A +F M Q++V +N +I LA+HG G+
Sbjct: 240 VYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQ 299
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E IE+++ + + GL PD TF +SACSHSGLV+ G F M + +GI P V HY C+
Sbjct: 300 EGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCL 359
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLLGR G L EA I+K+P+KP+A +W + LG+ +T G+ E G+ LK LL L +S
Sbjct: 360 VDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENS 419
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
G YVLLSN+Y+ RW D++K R++M D + K IS++
Sbjct: 420 GNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 82 SLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH---GSGKEAIEMFEKMRASG 138
+L+ YA CG L+ A +F + + ++ +WN ++ A A S +E + +F +M+
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR- 213
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRY-YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGE 197
P+E++ L+ +C++ G G + + ++ + ++ V ++DL + G L
Sbjct: 214 --PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVG--TSLIDLYSKCGCLSF 269
Query: 198 AMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY-DSGLYVL 250
A + ++ + D + A++ G + G ++ K L+ G DS +V+
Sbjct: 270 ARKVFDEMSQR-DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVV 322
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 234 bits (596), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 187/323 (57%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV+N V+WN++I + Q G + L+ M +SG P+ T V++LSSCS + G
Sbjct: 152 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQG 211
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + V + +SL++MY+KCG L A F ++ V W+ +I A H
Sbjct: 212 QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFH 271
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G EAIE+F M + + +E+ F LL ACSHSGL + G F +M +G P +
Sbjct: 272 GQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLK 331
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY C+VDLLGR G L +A ++I+ +P+K D V+W LL AC N EM +++ K++L++
Sbjct: 332 HYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 391
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
DS YVLL+N+++ ++RW D+ ++RK M D +KK IS E G +QF + D++
Sbjct: 392 DPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRS 451
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
S IYS + +L +K GY
Sbjct: 452 QSKSKEIYSYLKELTLEMKLKGY 474
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 125/255 (49%), Gaps = 2/255 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + +WN++I+ +Q + E + LF M G PD TL S+ S + + +++G
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 110
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H Y + + + + +SL +MY + G LQ + MP +N+V+WN +I A +
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + + +++ M+ SG P++ITF +LS+CS + G+ + G S VA
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA-EAIKIGASSVVAV 229
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++ + + G LG+A + D V+W +++ A G + ++ + E
Sbjct: 230 VSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 288
Query: 242 RYDSGLYVLLSNMYS 256
+ L+ +Y+
Sbjct: 289 NMEINEVAFLNLLYA 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N L+N Y + G L A +F MP + + +WN +I L +E + +F +M G
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
PDE T + S + V +G+ G + +G+ D+ + + + R G L +
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGY-TIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 201 LIQKLPMKPDAVVWGALL 218
+I+ +P++ + V W L+
Sbjct: 148 VIRSMPVR-NLVAWNTLI 164
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 234 bits (596), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 181/312 (58%)
Query: 12 SIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDN 71
+I+ + Q+ EA+ LF +M V P+ T +L+S + + L G H + +
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS 367
Query: 72 NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMF 131
V + N+L+NMYAK G+++ A F GM +++V+WN +I + HG G+EA+E F
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAF 427
Query: 132 EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR 191
++M +G P+ ITF G+L ACSH G VE G +YF + F + PD+ HY C+V LL +
Sbjct: 428 DRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSK 487
Query: 192 GGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLL 251
G +A ++ P++ D V W LL AC N +GK++ + +E DSG+YVLL
Sbjct: 488 AGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLL 547
Query: 252 SNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIYSMV 311
SN++++S+ W+ + K+R +MN+ G+KK +S I I + F+ +D H T IY+ V
Sbjct: 548 SNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKV 607
Query: 312 DQLMDHLKSVGY 323
++M +K +GY
Sbjct: 608 KEVMSKIKPLGY 619
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 5/234 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + ++S +S +++ G E +++ + + +N T +S L S++ DL L
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLA 256
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + V C +L+NMY KCG + A +F +N+ I+ A
Sbjct: 257 LQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQD 316
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
S +EA+ +F KM + P+E TF LL++ + L++ G GL+ + G V
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKS-GYRNHVMV 375
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+V++ + G + +A + + D V W ++ C G +G++ L+
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG---LGREALE 425
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 45 LVSILSSCSHMGDLALGKKAHDYICDNNITVSVT---LCNSLMNMYAKCGALQTAMDIFF 101
L +L C++ L +G+ H ++ N + NSL+N+Y KC A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGL-FPDEITFTGLLSACSHSGLVE 160
MP++NVVSW ++ G E +++F+ M SG P+E T + +CS+SG +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 161 MGRYY------FGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
G+ + +GL+S F + V Y+ L G GEA+ ++ LP +V
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYS-----LCSGN--GEAIRVLDDLPYCDLSVFS 206
Query: 215 GALLGACKTFGNLEMGKQILKQ 236
AL G + G + G +L++
Sbjct: 207 SALSGYLEC-GAFKEGLDVLRK 227
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ V+WN++IS G EA+E F RM +G +P+ T + +L +CSH+G + G
Sbjct: 399 MTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQG 458
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGA 117
+ + ++ + ++ + +K G + A D P + +VV+W ++ A
Sbjct: 459 LHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 123/303 (40%), Gaps = 39/303 (12%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLA 59
+MP +N VSW +++ + G E ++LF M SG P+ + SCS+ G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK+ H + + N+L+ MY+ C A+ + +P ++ ++ +
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G+ KE +++ K + +T+ L S+ + + M FG + +V
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEV 272
Query: 180 AHYACMVDLLGRGG-----------------FLG--------------EAMSLIQKLPMK 208
++++ G+ G FL EA++L K+ K
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 209 ---PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDD 263
P+ + LL + L+ G + +L+ G Y + + V L NMY++S +D
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG-YRNHVMVGNALVNMYAKSGSIED 391
Query: 264 MKK 266
+K
Sbjct: 392 ARK 394
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 192/313 (61%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSWNS+IS V+ G+ +A+++F M V PD T+VS+L++C+++G G
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H+YI N ++ + +L++MY KCG ++ +++F P+K + WN +I LA +
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + A+++F ++ SGL PD ++F G+L+AC+HSG V +F LM + I P + H
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y MV++LG G L EA +LI+ +P++ D V+W +LL AC+ GN+EM K+ K L +L
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLD 457
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++ YVLLSN Y+ +++ + R +M + ++K SSIE+D ++F+ H
Sbjct: 458 PDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTH 517
Query: 302 EVSTSIYSMVDQL 314
S IYS++D L
Sbjct: 518 PKSAEIYSLLDIL 530
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 143/359 (39%), Gaps = 76/359 (21%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG--VMPDNATLVSILSSCSHMGDLALGK 62
KN WN+II + A+ +F M S V P T S+ + +G G+
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM------------------- 103
+ H + + + N++++MY CG L A IF GM
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 104 ------------PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
PQ+N VSWN +I +G K+A++MF +M+ + PD T LL+
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 152 ACSHSGLVEMGRY--------YFGLMS--------------------STFGISP--DVAH 181
AC++ G E GR+ F L S + F +P ++
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ M+ L GF AM L +L ++PD+V + +L AC G + + + +
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 239 ELGRYDSGL--YVLLSNMYSESQRWDDMKKIRK--------IMNDSGIKKCRAISSIEI 287
E + + Y L+ N+ + ++ + + K ++ S + CR I ++E+
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 182/322 (56%), Gaps = 3/322 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG--VMPDNATLVSILSSCSHMGDLALGK 62
++ V+W +I + Q G +A+EL M P+ T+ L +C+ + L +GK
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 63 KAHDYICDNNIT-VSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y N V + + N L++MYAKCG++ A +F M KN V+W ++ +H
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+EA+ +F++MR G D +T +L ACSHSG+++ G YF M + FG+SP H
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+VDLLGR G L A+ LI+++PM+P VVW A L C+ G +E+G+ +++ EL
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELA 677
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G Y LLSN+Y+ + RW D+ +IR +M G+KK S +E F V DK H
Sbjct: 678 SNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTH 737
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+ IY ++ M +K +GY
Sbjct: 738 PHAKEIYQVLLDHMQRIKDIGY 759
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 47/283 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
M V + VSWNSII + + G+ A+E+F RM G PDN TLV++L C+ +G +L
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H + + + ++ + N L++MYAKCG + A +F M K+VVSWN ++ +
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 121 HGSGKEAIEMFEKMR-----------------------------------ASGLFPDEIT 145
G ++A+ +FEKM+ +SG+ P+E+T
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 146 FTGLLSACSHSGLVEMG--------RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGE 197
+LS C+ G + G +Y L + G V + ++D+ + +
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDT 425
Query: 198 AMSLIQKL-PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
A ++ L P + D V W ++G G+ ++L ++ E
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 11/235 (4%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNS+I + G + + LF M PDN T + +C + + G+ AH
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+V + N+L+ MY++C +L A +F M +VVSWN II + A G K A+E
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 130 MFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY----AC 184
MF +M G PD IT +L C+ +G + G F ++ ++ C
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCA-----SLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+VD+ + G + EA ++ + +K D V W A++ G E ++ +++ E
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 128/259 (49%), Gaps = 16/259 (6%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+W++ IS + Q G EA+ + +M SG+ P+ TL+S+LS C+ +G L GK+ H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 66 DYICDNNITVSVT-------LCNSLMNMYAKCGALQTAMDIF--FGMPQKNVVSWNVIIG 116
Y I + + N L++MYAKC + TA +F +++VV+W V+IG
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 117 ALALHGSGKEAIEMFEKMRASG--LFPDEITFTGLLSACSHSGLVEMGR--YYFGLMSST 172
+ HG +A+E+ +M P+ T + L AC+ + +G+ + + L +
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+ V++ C++D+ + G + +A + + M + V W +L+ G E
Sbjct: 509 NAVPLFVSN--CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 233 ILKQLLELGRYDSGLYVLL 251
I ++ +G G+ +L+
Sbjct: 566 IFDEMRRIGFKLDGVTLLV 584
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 191/320 (59%), Gaps = 8/320 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N V+WNS+IS ++ + E LF +M + ATL +IL +CS + L G
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 356
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I + V L NSLM+MY KCG ++ + +F M K++ SWN+++ A++
Sbjct: 357 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAIN 416
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ +E I +FE M SG+ PD ITF LLS CS +GL E G F M + F +SP + H
Sbjct: 417 GNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEH 476
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+VD+LGR G + EA+ +I+ +P KP A +WG+LL +C+ GN+ +G+ K+L L
Sbjct: 477 YACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLE 536
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID--------GCCYQ 293
++ G YV++SN+Y++++ WD++ KIR++M G+KK S +++ G Y+
Sbjct: 537 PHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYE 596
Query: 294 FMVDDKNHEVSTSIYSMVDQ 313
F D+ +V T + +++
Sbjct: 597 FRNSDEYKKVWTELQEAIEK 616
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
W ++ + + G +A+ ++ M S + P N ++ L +C + DL +G+ H I
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
V + N L+ +Y + G A +F GM ++NVV+WN +I L+ E
Sbjct: 264 KRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFN 323
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
+F KM+ + T T +L ACS + G+ + + PDV ++D+
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS-KEKPDVPLLNSLMDMY 382
Query: 190 GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
G+ G + + + + K D W +L GN+E + + ++E G G+
Sbjct: 383 GKCGEVEYSRRVFDVMLTK-DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M K+ SWN +++C+ G E + LF M SGV PD T V++LS CS G
Sbjct: 397 VMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEY 456
Query: 61 GKKAHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS-WNVIIGAL 118
G + + + ++ ++ L+++ + G ++ A+ + MP K S W ++ +
Sbjct: 457 GLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSC 516
Query: 119 ALHGS 123
LHG+
Sbjct: 517 RLHGN 521
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 175/283 (61%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V W ++IS + + EA +LF +M ++P+ TL +IL SCS +G L GK
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y+ N I + S ++MYA+CG +Q A +F MP++NV+SW+ +I A ++G
Sbjct: 335 HGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLF 394
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA++ F KM++ + P+ +TF LLSACSHSG V+ G F M+ +G+ P+ HYAC
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC 454
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G +GEA S I +P+KP A WGALL AC+ +++ +I ++LL +
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEK 514
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
S +YVLLSN+Y+++ W+ + +R+ M G +K S+ E+
Sbjct: 515 SSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 3/228 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+PV+N+V W ++ +++ + E LFC M +G+ D TL+ ++ +C ++ +G
Sbjct: 170 IPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVG 229
Query: 62 KKAHDY-ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K H I + I S L S+++MY KC L A +F +NVV W +I A
Sbjct: 230 KCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAK 289
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
EA ++F +M + P++ T +L +CS G + G+ G M GI D
Sbjct: 290 CERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAV 348
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
++ +D+ R G + A ++ +P + + + W +++ A G E
Sbjct: 349 NFTSFIDMYARCGNIQMARTVFDMMPER-NVISWSSMINAFGINGLFE 395
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 7/238 (2%)
Query: 5 KNAVSWNSIISCHVQEGQ--HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
+N SWN+I+S + + +++ + L+ RM D+ LV + +C +G L G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H N + + SL+ MYA+ G +++A +F +P +N V W V++ +
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
E +F MR +GL D +T L+ AC + ++G+ G+ I
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC----KTFGNLEMGKQILKQ 236
A ++D+ + L A L + + + V+W L+ + ++ +Q+L++
Sbjct: 250 ASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MMP +N +SW+S+I+ G EA++ F +M V+P++ T VS+LS+CSH G++
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431
Query: 61 GKKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS-WNVIIGAL 118
G K + + D + ++++ + G + A MP K + S W ++ A
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC-SHSGLVEM 161
+H A E+ EK+ + + P++ + LLS + +G+ EM
Sbjct: 492 RIHKEVDLAGEIAEKLLS--MEPEKSSVYVLLSNIYADAGMWEM 533
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 197/333 (59%), Gaps = 4/333 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ V+W ++++ Q + EA+E F RM SG+ D T+ +S+C+ +G
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYA 300
Query: 62 KKAHDYICDNNITVS--VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+A + + S V + ++L++MY+KCG ++ A+++F M KNV +++ +I LA
Sbjct: 301 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLA 360
Query: 120 LHGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
HG +EA+ +F M + + P+ +TF G L ACSHSGLV+ GR F M TFG+ P
Sbjct: 361 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPT 420
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY CMVDLLGR G L EA+ LI+ + ++P VWGALLGAC+ N E+ + + L
Sbjct: 421 RDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLF 480
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAIS-SIEIDGCCYQFMVD 297
EL G Y+LLSN+Y+ + W + ++RK++ + G+KK A+S ++ +G ++F
Sbjct: 481 ELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPG 540
Query: 298 DKNHEVSTSIYSMVDQLMDHLKSVGYPCKHSDV 330
+ NH +S I +++L++ L +GY S V
Sbjct: 541 NLNHPMSNKIQDKLEELVERLTVLGYQPDLSSV 573
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N W ++I + EG+ EA+ ++ M + P + T ++L +C M DL LG++
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS- 123
H V + N++++MY KC ++ A +F MP+++V+SW +I A A G+
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 124 ------------------------------GKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
+EA+E F++M SG+ DE+T G +SAC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 154 SHSGLVEMGRYYFGLMSSTFGISP---------------------------------DVA 180
+ G + + + G SP +V
Sbjct: 292 AQLGASKYADRAVQIAQKS-GYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVF 350
Query: 181 HYACMVDLLGRGGFLGEAMSL----IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
Y+ M+ L G EA+ L + + +KP+ V + L AC G ++ G+Q+
Sbjct: 351 TYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDS 410
Query: 237 LLE 239
+ +
Sbjct: 411 MYQ 413
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 43 ATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQT--AMDIF 100
++L+S L C ++ + K+ H ++ + S + L+ K G A +
Sbjct: 50 SSLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE 160
+ +N W +I A+ G EAI M+ MR + P TF+ LL AC +
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 161 MGRYYFGLMSSTFGISPDVAHYA--CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+GR + + TF + Y M+D+ + + A + ++P + D + W L+
Sbjct: 167 LGRQFH---AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER-DVISWTELI 222
Query: 219 GACKTFGNLEMGKQILKQL 237
A GN+E ++ + L
Sbjct: 223 AAYARVGNMECAAELFESL 241
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 176/278 (63%), Gaps = 1/278 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
MPV++ VSWN++++ + G + E +E+F +M S PD TLVS+LS+C+ +G L+
Sbjct: 263 MPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQ 322
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H YI + I + L +L++MY+KCG + A+++F +++V +WN II L++
Sbjct: 323 GEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSV 382
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG GK+A+E+F +M G P+ ITF G+LSAC+H G+++ R F +MSS + + P +
Sbjct: 383 HGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIE 442
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLLGR G + EA L+ ++P +++ +LLGACK FG LE ++I +LLEL
Sbjct: 443 HYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLEL 502
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
DS Y +SN+Y+ RW+ + R+ M + +
Sbjct: 503 NLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 14/284 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N + NS+I + A+ +F M + V PD + +L +C+ G++ H
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + V + N+L+N+Y + G + A + MP ++ VSWN ++ A G
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVD 223
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA +F++M + ++ ++S + +GLV+ + F M DV + M
Sbjct: 224 EARALFDEMEERNV----ESWNFMISGYAAAGLVKEAKEVFDSMPVR-----DVVSWNAM 274
Query: 186 VDLLGRGGFLGEAMSLIQKL----PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
V G E + + K+ KPD ++L AC + G+L G+ + + + G
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 242 RYDSG-LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISS 284
G L L +MYS+ + D ++ + + + +I S
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIIS 378
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 45/240 (18%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++AVSWNS++S ++++G EA LF
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALF------------------------------- 229
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
D + + N V N +++ YA G ++ A ++F MP ++VVSWN ++ A A
Sbjct: 230 ----DEMEERN----VESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV 281
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G E +E+F KM S PD T +LSAC+ G + G + + GI +
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK-HGIEIEGF 340
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+VD+ + G + +A+ + + K D W +++ G +GK L+ E+
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISDLSVHG---LGKDALEIFSEM 396
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 176/318 (55%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VS I+ Q G EA++ F RM +GV D + ++L L LGK+ H
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLH 380
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + + + N L+NMY+KCG L + +F MP++N VSWN +I A A HG G
Sbjct: 381 SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGL 440
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
A++++E+M + P ++TF LL ACSH GL++ GR M GI P HY C+
Sbjct: 441 AALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCI 500
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
+D+LGR G L EA S I LP+KPD +W ALLGAC G+ E+G+ +QL + S
Sbjct: 501 IDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSS 560
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
++L++N+YS +W + K K M G+ K ISSIEI+ + F+V+DK H +
Sbjct: 561 SAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAE 620
Query: 306 SIYSMVDQLMDHLKSVGY 323
+IY ++ L + GY
Sbjct: 621 AIYDVLSGLFPVMVDEGY 638
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N ++ ++IS ++ H + + LF M V P++ T +S L++CS + G
Sbjct: 216 MSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEG 275
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + I + + ++LM+MY+KCG+++ A IF + + VS VI+ LA +
Sbjct: 276 QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQN 335
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM------------ 169
GS +EAI+ F +M +G+ D + +L + +G+ L+
Sbjct: 336 GSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 170 ----------------SSTFGISP--DVAHYACMVDLLGRGGFLGEAMSLIQK---LPMK 208
+ F P + + M+ R G A+ L ++ L +K
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
P V + +LL AC G ++ G+++L ++ E+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEV 487
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP+++ +S N + ++ + L RM SG D+ATL +LS C +
Sbjct: 116 MPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHATLTIVLSVCDTPEFCLVT 174
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + +++ N L+ Y KCG + +F GM +NV++ +I L +
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++ + +F MR + P+ +T+ L+ACS S + G+ L+ +GI ++
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK-YGIESELCI 293
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++D+ + G + +A ++ + + D V +L G+ E Q ++L+ G
Sbjct: 294 ESALMDMYSKCGSIEDAWTIFES-TTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSWNS+I+ + G A++L+ M V P + T +S+L +CSH+G + G
Sbjct: 418 MPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKG 477
Query: 62 KKAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
++ + + + + I +++M + G L+ A +P K + W ++GA +
Sbjct: 478 RELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Query: 120 LHG 122
HG
Sbjct: 538 FHG 540
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 76 SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR 135
++ + NSL+++YAKCG L A+ +F MP ++V+S N++ + + + ++M
Sbjct: 89 ALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRML 148
Query: 136 ASGLFPDEITFTGLLSACSHSG--LVEMGRYYFGLMSS-----TFGISPDVAHYACMVDL 188
SG F D T T +LS C LV + ++S + G +++ C +
Sbjct: 149 GSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV 207
Query: 189 LGRGGFLG--------------------------EAMSLIQKLPMKPDAVVWGALLGACK 222
GRG F G SL+++ + P++V + + L AC
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 223 TFGNLEMGKQILKQLLELG 241
+ G+QI L + G
Sbjct: 268 GSQRIVEGQQIHALLWKYG 286
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 194/316 (61%), Gaps = 5/316 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
PVK+ V W ++++ +VQ + EA+ELF M +G+ PDN LVS+L+ C+ G L GK
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H YI +N +TV + +L++MYAKCG ++TA+++F+ + +++ SW +I LA++G
Sbjct: 300 WIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG 359
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
A++++ +M G+ D ITF +L+AC+H G V GR F M+ + P H
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAV---VWGALLGACKTFGNLEMGKQILKQLLE 239
+C++DLL R G L EA LI K+ + D V+ +LL A + +GN+++ +++ ++L +
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEK 479
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ DS + LL+++Y+ + RW+D+ +R+ M D GI+K SSIEIDG ++F+V D
Sbjct: 480 VEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDD 539
Query: 300 --NHEVSTSIYSMVDQ 313
+H I SM+ Q
Sbjct: 540 LLSHPKMDEINSMLHQ 555
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 66/303 (21%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ VSWN +IS +V G+ +A+ +F RM S + D T+VS LS+CS + +L +
Sbjct: 107 MPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEI 166
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM----------------- 103
G++ + ++ +SV + N+L++M+ KCG L A +F M
Sbjct: 167 GERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVS 225
Query: 104 --------------PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGL 149
P K+VV W ++ EA+E+F M+ +G+ PD L
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSL 285
Query: 150 LSACSHSGLVEMGRYYFGLMSST-----------------------------FGISP-DV 179
L+ C+ +G +E G++ G ++ + I D
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDT 345
Query: 180 AHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
A + ++ L G G A+ L ++ + ++ DA+ + A+L AC G + G++I
Sbjct: 346 ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHS 405
Query: 237 LLE 239
+ E
Sbjct: 406 MTE 408
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 7/282 (2%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+N ++ + + LF + G+ PDN TL +L S + + G+K H Y
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + NSLM MYA G ++ +F MPQ++VVSWN +I + +G ++AI
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 130 MFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+F++M + S L DE T LSACS +E+G + + + F +S + + +VD+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDM 191
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLY 248
+ G L +A ++ + K + W +++ + G ++ + + ++ D L+
Sbjct: 192 FCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEARVLFER---SPVKDVVLW 247
Query: 249 VLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGC 290
+ N Y + R+D+ ++ + M +GI+ + + GC
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGC 289
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 190/322 (59%), Gaps = 1/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M N + WN++IS + + G EA+++F M V PD ++ S +S+C+ +G L
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ ++Y+ ++ V + ++L++M+AKCG+++ A +F ++VV W+ +I LH
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EAI ++ M G+ P+++TF GLL AC+HSG+V G ++F M+ I+P H
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQH 461
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC++DLLGR G L +A +I+ +P++P VWGALL ACK ++E+G+ +QL +
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++G YV LSN+Y+ ++ WD + ++R M + G+ K S +E+ G F V DK+H
Sbjct: 522 PSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSH 581
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
I V+ + LK G+
Sbjct: 582 PRYEEIERQVEWIESRLKEGGF 603
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VSW +I+S + Q G+ EA+E+F +M V PD LVS+L++ + + DL G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + L SL MYAKCG + TA +F M N++ WN +I A +
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EAI+MF +M + PD I+ T +SAC+ G +E R + + + DV
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS-DYRDDVFI 360
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ ++D+ + G + E L+ + D VVW A++
Sbjct: 361 SSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMI 396
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P WN+II + + +A+ ++ M ++ V PD+ T +L +CS + L +G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG--MPQKNVVSWNVIIGALA 119
+ H + V + N L+ +YAKC L +A +F G +P++ +VSW I+ A A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMG------ 162
+G EA+E+F +MR + PD + +L+A + H+ +V+MG
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 163 ------------------RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
+ F M SP++ + M+ + G+ EA+ + +
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMK-----SPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 205 L---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSN 253
+ ++PD + + + AC G+LE + + + +GR D V +S+
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEY---VGRSDYRDDVFISS 362
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 36 SGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQT 95
SG+ D + S++ S +H L K+ H + + S L L++ + G +
Sbjct: 16 SGIHSD-SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 96 AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
A +F +P+ + WN II + + ++A+ M+ M+ + + PD TF LL ACS
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV-W 214
++MGR+ + G DV ++ L + LG A ++ + LP+ +V W
Sbjct: 132 LSHLQMGRFVHAQVFR-LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 215 GALLGACKTFGNLEMGKQILKQLLEL 240
A++ A G +I Q+ ++
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKM 216
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 182/301 (60%), Gaps = 1/301 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN VSW ++I+ +V++G A++LF +M GV P+ T S L + + + L G
Sbjct: 271 MPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHG 330
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALAL 120
K+ H Y+ N+ + + +SL++MY+K G+L+ + +F K + V WN +I ALA
Sbjct: 331 KEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQ 390
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G +A+ M + M + P+ T +L+ACSHSGLVE G +F M+ GI PD
Sbjct: 391 HGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQE 450
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYAC++DLLGR G E M I+++P +PD +W A+LG C+ GN E+GK+ +L++L
Sbjct: 451 HYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKL 510
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
S Y+LLS++Y++ +W+ ++K+R +M + K +A+S IEI+ F V D +
Sbjct: 511 DPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGS 570
Query: 301 H 301
H
Sbjct: 571 H 571
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 134/301 (44%), Gaps = 45/301 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWN+++ + Q+G EA+ + SG+ + + +L++C L L
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLN 198
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAM------------------------ 97
++AH + +V L S+++ YAKCG +++A
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKL 258
Query: 98 -------DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
+F MP+KN VSW +I GSG A+++F KM A G+ P++ TF+ L
Sbjct: 259 GDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL 318
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
A + + G+ G M T + P+ + ++D+ + G L + + + K D
Sbjct: 319 CASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHD 377
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRY-----DSGLYVLL-----SNMYSESQR 260
V W ++ A G +G + L+ L ++ ++ + L V+L S + E R
Sbjct: 378 CVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLR 434
Query: 261 W 261
W
Sbjct: 435 W 435
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 113/275 (41%), Gaps = 39/275 (14%)
Query: 2 MPVKNAVSW-----NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG 56
MP+ N S +S H + + ++A+ + G+ L S+L C
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 57 DLALGKKAHDYICDNNITVSVTL-CNSLMNMYAKCGA----------------------- 92
L GK H ++ TL N L+ MY KCG
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV 120
Query: 93 --------LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
L A +F MP+++VVSWN ++ A G+ EA+ +++ R SG+ +E
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 145 TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
+F GLL+AC S +++ R G + G +V ++D + G + A +
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVA-GFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ +K D +W L+ G++E +++ ++ E
Sbjct: 240 MTVK-DIHIWTTLISGYAKLGDMEAAEKLFCEMPE 273
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 231 bits (589), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 174/289 (60%), Gaps = 5/289 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP+++ VSWNS+IS + Q EA++LF M G+ PDN +VS LS+C+ GD G
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKG 268
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K HDY + + L L++ YAKCG + TAM+IF K + +WN +I LA+H
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+G+ ++ F KM +SG+ PD +TF +L CSHSGLV+ R F M S + ++ ++ H
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKH 388
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPM----KPDAVVWGALLGACKTFGNLEMGKQILKQL 237
Y CM DLLGR G + EA +I+++P + + W LLG C+ GN+E+ ++ ++
Sbjct: 389 YGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRV 448
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMN-DSGIKKCRAISSI 285
L D G+Y ++ MY+ ++RW+++ K+R+I++ D +KK S +
Sbjct: 449 KALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 36/272 (13%)
Query: 10 WNSIIS-CHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCS--HMGDLALGKKAH- 65
+N+II C + E + F M V PD T + +C+ GDL L K H
Sbjct: 82 FNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHC 141
Query: 66 ------------------------------DYICDNNITVSVTLCNSLMNMYAKCGALQT 95
+ D N V N L++ K +
Sbjct: 142 QALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVR 201
Query: 96 AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
A ++F MP +++VSWN +I A +EAI++F++M A GL PD + LSAC+
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWG 215
SG + G+ + D +VD + GF+ AM + + L W
Sbjct: 262 SGDWQKGKAIHDYTKRK-RLFIDSFLATGLVDFYAKCGFIDTAMEIFE-LCSDKTLFTWN 319
Query: 216 ALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
A++ GN E+ ++++ G G+
Sbjct: 320 AMITGLAMHGNGELTVDYFRKMVSSGIKPDGV 351
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 188/330 (56%), Gaps = 3/330 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M ++ +W +I + ++G EA++LF +M GV P +L+SILS C+ + L
Sbjct: 290 LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQY 349
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H ++ V + + LM MY KCG L A +F K+++ WN II A
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 409
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G+EA+++F +M +SG P+++T +L+ACS++G +E G F M S F ++P V
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVE 469
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY+C VD+LGR G + +AM LI+ + +KPDA VWGALLGACKT L++ + K+L E
Sbjct: 470 HYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN 529
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD-K 299
++G YVLLS++ + +W D+ +RK M + + K S IE+ + F K
Sbjct: 530 EPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIK 589
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGYP--CKH 327
NH I M+++ L+ GY C H
Sbjct: 590 NHPEQAMILMMLEKTDGLLREAGYSPDCSH 619
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 38/283 (13%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRM----------CVSGVMPDNA------- 43
+MP +N VSW +++ ++QEG EA LF RM G++ D
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKL 163
Query: 44 ----TLVSILSSCSHMGDLALGKKAHD--YICDNNITVSVTLCNSLMNMYAKCGALQTAM 97
+ +++S + +G L + + I D +V +++ Y + + A
Sbjct: 164 YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+F MP+K VSW ++ L G ++A E FE M + I ++ G
Sbjct: 224 KLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV----IACNAMIVGFGEVG 279
Query: 158 LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVW 214
+ R F LM D A + M+ R GF EA+ L +QK ++P
Sbjct: 280 EISKARRVFDLMEDR-----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMY 255
++L C T +L+ G+Q+ L+ ++D +YV +L MY
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRC-QFDDDVYVASVLMTMY 376
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 18/227 (7%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SWNSI+S + G EA +LF M V+ N + + + + + + +
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRM----IVEARNVFELM 105
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ N+ VS T +++ Y + G + A +F+ MP++N VSW V+ G L G +A
Sbjct: 106 PERNV-VSWT---AMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKAR 161
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
++++ M D + T ++ G V+ R F M +V + M+
Sbjct: 162 KLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMRER-----NVVTWTTMITG 212
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+ + A L + +P K + V W ++L G +E ++ +
Sbjct: 213 YRQNNRVDVARKLFEVMPEKTE-VSWTSMLLGYTLSGRIEDAEEFFE 258
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 110/271 (40%), Gaps = 45/271 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATL--VSILSSCSHMGDLA 59
M +N V+W ++I+ + Q + A +LF VMP+ + S+L + G +
Sbjct: 198 MRERNVVTWTTMITGYRQNNRVDVARKLF------EVMPEKTEVSWTSMLLGYTLSGRIE 251
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
++ + + V CN+++ + + G + A +F M ++ +W +I A
Sbjct: 252 DAEEFFEVMP----MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE 307
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR--------------YY 165
G EA+++F +M+ G+ P + +LS C+ ++ GR Y
Sbjct: 308 RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVY 367
Query: 166 FGLMSSTFGI----------------SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK- 208
+ T + S D+ + ++ G EA+ + ++P
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG 427
Query: 209 --PDAVVWGALLGACKTFGNLEMGKQILKQL 237
P+ V A+L AC G LE G +I + +
Sbjct: 428 TMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 80 CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGL 139
C+ ++ ++ G + A F + K + SWN I+ +G KEA ++F++M +
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV 79
Query: 140 FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAM 199
+++ GL+S + ++ R F LM +V + MV + G +GEA
Sbjct: 80 ----VSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAMVKGYMQEGMVGEAE 130
Query: 200 SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
SL ++P + + V W + G G ++ +++
Sbjct: 131 SLFWRMPER-NEVSWTVMFGGLIDDGRIDKARKL 163
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 189/320 (59%), Gaps = 1/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHM-GDLALGKK 63
K+ V+W+++++ + Q G+ A+++F + G+ P+ T SIL+ C+ + GK+
Sbjct: 457 KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ 516
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + + S+ + ++L+ MYAK G +++A ++F +K++VSWN +I A HG
Sbjct: 517 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQ 576
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+A+++F++M+ + D +TF G+ +AC+H+GLVE G YF +M I+P H +
Sbjct: 577 AMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS 636
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
CMVDL R G L +AM +I+ +P + +W +L AC+ E+G+ ++++ +
Sbjct: 637 CMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPE 696
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
DS YVLLSNMY+ES W + K+RK+MN+ +KK S IE+ Y F+ D++H +
Sbjct: 697 DSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPL 756
Query: 304 STSIYSMVDQLMDHLKSVGY 323
IY ++ L LK +GY
Sbjct: 757 KDQIYMKLEDLSTRLKDLGY 776
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 13/238 (5%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N VSW ++IS +Q EA++LF M GV P+ T IL++ + +
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SE 414
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + N S T+ +L++ Y K G ++ A +F G+ K++V+W+ ++ A G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+ AI+MF ++ G+ P+E TF+ +L+ C+ + MG+ G F I +
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN-ASMGQ---GKQFHGFAIKSRLDSSL 530
Query: 184 C----MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
C ++ + + G + A + ++ K D V W +++ G + K++
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQAMKALDVFKEM 587
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N V+W ++IS + + + E + LF RM G P++ T + L + G G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + N + ++ + NSL+N+Y KCG ++ A +F K+VV+WN +I A +
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
G EA+ MF MR + + E +F ++ C++
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 116/239 (48%), Gaps = 7/239 (2%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
VK+ V+WNS+IS + G EA+ +F M ++ V ++ S++ C+++ +L ++
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALHG 122
H + + +LM Y+KC A+ A+ +F + NVVSW +I +
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+EA+++F +M+ G+ P+E T++ +L+A ++ + ++ + + S V
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG-- 431
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D + G + EA + + K D V W A+L G E ++ +L + G
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 2/216 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P ++ S+ S++ ++G+ EA LF + G+ D + S+L + + D G+
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGR 113
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H V++ SL++ Y K + +F M ++NVV+W +I A +
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
E + +F +M+ G P+ TF L + G+ G ++ G+ +
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-GLDKTIPVS 232
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+++L + G + +A L K +K V W +++
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMI 267
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 169/279 (60%), Gaps = 1/279 (0%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKKAHD 66
+SWNS+IS VQ G+ + A E+F +M ++G ++PD T+ S+L+ CS + L LGK+ H
Sbjct: 414 ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG 473
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
Y NN +C +L++MYAKCG A +F + +WN +I +L G
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHR 533
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
A+ + +MR GL PDEITF G+LSAC+H G V+ G+ F M FGISP + HYA MV
Sbjct: 534 ALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMV 593
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSG 246
LLGR EA+ LI K+ +KPD+ VWGALL AC LE+G+ + +++ L + G
Sbjct: 594 GLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGG 653
Query: 247 LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
LYVL+SN+Y+ WDD+ ++R +M D+G +S I
Sbjct: 654 LYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ V WN++I + + G +A +LF M G P TLV++L C G ++ G
Sbjct: 111 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + + N+L++ Y+KC L +A +F M K+ VSWN +IGA +
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 230
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSA---------------------------CS 154
G +EAI +F+ M + +T LLSA C+
Sbjct: 231 GLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCA 290
Query: 155 HSG---LVEMGRYYFGL-MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
+S LV R Y S G++ V+ YA D+ S ++L MK D
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM----DIAVVYFSKTRQLCMKID 346
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL-LSNMYSESQRWDDMKKI 267
AV +L CK ++++G + ++ G L V L MYS ++DD++ +
Sbjct: 347 AVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYS---KFDDVETV 401
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V SI+SC+ ++G A+ F + + D LV IL C + +G H Y
Sbjct: 313 VGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGY 372
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + + N L+ MY+K ++T + +F + + ++SWN +I G A
Sbjct: 373 AIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTA 432
Query: 128 IEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC-- 184
E+F +M + GL PD IT LL+ CS + +G+ G T + + ++ C
Sbjct: 433 FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGY---TLRNNFENENFVCTA 489
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++D+ + G +A S+ + + P W +++
Sbjct: 490 LIDMYAKCGNEVQAESVFKSIK-APCTATWNSMI 522
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
SL+N+Y K G + +A +F MP+++ V WN +I + +G +A ++F M G
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
P T LL C G V GR G+ + + G+ D ++ + LG A
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVKNALISFYSKCAELGSAEV 207
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
L +++ K V W ++GA G E + K + E
Sbjct: 208 LFREMKDK-STVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 191/319 (59%), Gaps = 2/319 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW ++IS QE + ++L+ +M S P++ T ++LS+C+ G L G
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + NSL++MY KCG L+ A IF K+VVSWN +I A H
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 122 GSGKEAIEMFE-KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +AIE+FE M SG PD IT+ G+LS+C H+GLV+ GR +F LM+ G+ P++
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELN 359
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY+C+VDLLGR G L EA+ LI+ +PMKP++V+WG+LL +C+ G++ G + ++ L L
Sbjct: 360 HYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLML 419
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ +V L+N+Y+ W + +RK+M D G+K S IEI+ + F +D +
Sbjct: 420 EPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGS 479
Query: 301 HEVSTSIYSMVDQLMDHLK 319
+ I ++ L+DH++
Sbjct: 480 NCRMLEIVHVLHCLIDHME 498
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D L S + SC D G H V L +SL+ +Y G ++ A +F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE 160
MP++NVVSW +I A ++++ KMR S P++ TFT LLSAC+ SG +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 161 MGR------YYFGLMS-------------------STFGI-----SPDVAHYACMVDLLG 190
GR + GL S F I + DV + M+
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 191 RGGFLGEAMSLIQ----KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ G +A+ L + K KPDA+ + +L +C+ G ++ G++ + E G
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHG 353
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 228 bits (582), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 203/332 (61%), Gaps = 14/332 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM---CVSGVMPDNATLVSILSSCSHMGDL 58
MP +NAV+W +++ ++ G E +EL M C G+ + TL S+LS+C+ G+L
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNL 260
Query: 59 ALGKKAHDYICDNNITV-------SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSW 111
+G+ H Y + + V + +L++MYAKCG + ++M++F M ++NVV+W
Sbjct: 261 VVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTW 320
Query: 112 NVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS 171
N + LA+HG G+ I+MF +M + PD++TFT +LSACSHSG+V+ G F +
Sbjct: 321 NALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR- 378
Query: 172 TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGK 231
+G+ P V HYACMVDLLGR G + EA L++++P+ P+ VV G+LLG+C G +E+ +
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAE 438
Query: 232 QILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
+I ++L+++ ++ +L+SNMY R D +R + GI+K +SSI ++
Sbjct: 439 RIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSV 498
Query: 292 YQFMVDDKNHEVSTSIYSMVDQLMDHLKSVGY 323
++F D++H + IY ++++++ ++S GY
Sbjct: 499 HRFSSGDRSHPRTKEIYLKLNEVIERIRSAGY 530
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 39/273 (14%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V W +++S + G +M+LF M V D+ ++V + C+ + DL ++
Sbjct: 74 KDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQG 133
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCG-------------------------------AL 93
H + SV +CN+LM+MY KCG L
Sbjct: 134 HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGL 193
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSA 152
+ ++F MP++N V+W V++ G +E +E+ +M G + +T +LSA
Sbjct: 194 ERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSA 253
Query: 153 CSHSGLVEMGRYYF------GLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
C+ SG + +GR+ +M DV +VD+ + G + +M++ +L
Sbjct: 254 CAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF-RLM 312
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
K + V W AL G M + Q++
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 8/197 (4%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNNITVSVT--LCNSLMNMYAKCGALQTAMDIFFGMP- 104
+L C+H L GK+ H + + + + L N+L YA G + TA +F +P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 105 -QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
+K+ V W ++ + + +G ++++F +MR + D+++ L C+ L ++G
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAK--LEDLGF 129
Query: 164 YYFGL-MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACK 222
G ++ G+ V ++D+ G+ G + E + ++L K V W +L
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVLDTVV 188
Query: 223 TFGNLEMGKQILKQLLE 239
+ LE G+++ ++ E
Sbjct: 189 KWEGLERGREVFHEMPE 205
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 193/318 (60%), Gaps = 2/318 (0%)
Query: 8 VSWNSIISCH-VQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
V WN++IS + + E EA++ F +M G PD+ + V + S+CS++ + K+ H
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 67 YICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
++I + +++ N+L+++Y K G LQ A +F MP+ N VS+N +I A HG G
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ ++++M SG+ P++ITF +LSAC+H G V+ G+ YF M TF I P+ HY+CM
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCM 489
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
+DLLGR G L EA I +P KP +V W ALLGAC+ N+ + ++ +L+ + +
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
YV+L+NMY+++++W++M +RK M I+K S IE+ + F+ +D +H +
Sbjct: 550 TPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 306 SIYSMVDQLMDHLKSVGY 323
+ ++++M +K VGY
Sbjct: 610 EVNEYLEEMMKKMKKVGY 627
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VS+N++IS + + AM LF RM G D TL ++++C DL
Sbjct: 100 IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI-- 157
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVIIGALAL 120
K+ H + ++ N+ + Y+K G L+ A+ +F+GM + ++ VSWN +I A
Sbjct: 158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQ 217
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDV 179
H G +A+ ++++M G D T +L+A + + GR + G L+ + F + V
Sbjct: 218 HKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV 277
Query: 180 AHYACMVDLLGR-GGFLG--EAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
+ ++D + GG G ++ + Q++ + PD VVW ++ N E+ ++ +K
Sbjct: 278 G--SGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGYSM--NEELSEEAVKS 332
Query: 237 LLELGR 242
++ R
Sbjct: 333 FRQMQR 338
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 48/282 (17%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M +++ VSWNS+I + Q + A+A+ L+ M G D TL S+L++ + + L
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMD---IFFGMPQKNVVSWNVIIGA 117
G++ H + + + + L++ Y+KCG D +F + ++V WN +I
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 118 LALHGS-GKEAIEMFEKMRASGLFPDEITFTGLLSACSH--------------------- 155
+++ +EA++ F +M+ G PD+ +F + SACS+
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 156 ---------------SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
SG ++ R+ F M +S + CM+ + G EA+
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS-----FNCMIKGYAQHGHGTEALL 433
Query: 201 LIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
L Q++ + P+ + + A+L AC G ++ G++ + E
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP NAVS+N +I + Q G EA+ L+ RM SG+ P+ T V++LS+C+H G + G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
++ + + + I + ++++ + G L+ A MP K V+W ++GA
Sbjct: 467 QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACR 526
Query: 120 LH 121
H
Sbjct: 527 KH 528
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 84/216 (38%), Gaps = 39/216 (18%)
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG-------------- 102
DL GK H + + S L N +N+Y+KCG L A F+
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 103 -----------------MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEIT 145
+PQ + VS+N +I A A+ +F++MR G D T
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 146 FTGLLSA-CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
+GL++A C L++ S + G + V +GG L EA+S+
Sbjct: 143 LSGLIAACCDRVDLIKQ----LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ D V W +++ A +G + G + L E+
Sbjct: 199 MDELRDEVSWNSMIVA---YGQHKEGAKALALYKEM 231
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 190/318 (59%), Gaps = 2/318 (0%)
Query: 6 NAVSWNSIIS-CHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
N V+W S+I C+VQ G+ +++E F +M S V+ ++ T+ ILS C+ + L LG++
Sbjct: 398 NVVTWTSVIKGCNVQ-GRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREI 456
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ +++ ++ + N+L+NMYAKCG L +F + K+++SWN II +HG
Sbjct: 457 HGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFA 516
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
++A+ MF++M +SG PD I +LSACSH+GLVE GR F MS FG+ P HYAC
Sbjct: 517 EKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYAC 576
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR GFL EA +++ +PM+P V GALL +C+ N+++ + I QL L
Sbjct: 577 IVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPER 636
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+G Y+LLSN+YS RW++ +R + +KK S IE+ Y+F
Sbjct: 637 TGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEF 696
Query: 305 TSIYSMVDQLMDHLKSVG 322
+IY +++ L+ H+ G
Sbjct: 697 ETIYPVLEDLVSHMLKKG 714
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNSI+ +V G + A+EL+ M G+ D L IL +C ++G L + H +
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ ++ + N L+ +Y K G + A ++F MP +N +SWNV+I + + A++
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM 169
+FE M+ PDE+T+T +LS S G E YF LM
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 41/281 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+W S++SCH Q G+ + ++ F M +SG L S C+ + L++ +K H
Sbjct: 258 DEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVH 317
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK------------------- 106
Y+ + N+L+++Y K G ++ A +F + K
Sbjct: 318 GYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLD 377
Query: 107 --------------------NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
NVV+W +I + G G +++E F +M+ S + + +T
Sbjct: 378 EALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTI 437
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
+LS C+ + +GR G + T +S ++ +V++ + G L E SL+ +
Sbjct: 438 CCILSICAELPALNLGREIHGHVIRT-SMSENILVQNALVNMYAKCGLLSEG-SLVFEAI 495
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
D + W +++ G E + +++ G + G+
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SWNSII + G +A+ +F RM SG PD LV++LS+CSH G + G++
Sbjct: 498 KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
Query: 65 HDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ + ++++ + G L+ A +I MP + V ++GAL
Sbjct: 558 FYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV---CVLGAL 609
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 166/286 (58%), Gaps = 1/286 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + VSWNSII+ + Q G EA+ +F M G+ PD T +S++ + G LG
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ + +L+NMYAK G ++A F + +K+ ++W V+I LA H
Sbjct: 337 QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 122 GSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G EA+ +F++M+ G PD IT+ G+L ACSH GLVE G+ YF M G+ P V
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVE 456
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVD+L R G EA L++ +P+KP+ +WGALL C NLE+ +I + E
Sbjct: 457 HYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEP 516
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
SG+YVLLSN+Y+++ RW D+K IR+ M + K SS+E
Sbjct: 517 EELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 170/357 (47%), Gaps = 54/357 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P N V+W S+IS V + ++A+E F M +GV + +V +L +C D+ G
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG 227
Query: 62 KKAHDYI--------CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNV 113
K H ++ + + +V L SL++MYAKCG L+TA +F GMP++ +VSWN
Sbjct: 228 KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNS 287
Query: 114 IIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF 173
II + +G +EA+ MF M G+ PD++TF ++ A G ++G+ +S T
Sbjct: 288 IITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT- 346
Query: 174 GISPDVAHYACMVDLLGRGG-----------------------FLG--------EAMSLI 202
G D A +V++ + G +G EA+S+
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 203 QKLPMK----PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL--YVLLSNMYS 256
Q++ K PD + + +L AC G +E G++ ++ +L + + Y + ++ S
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 257 ESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIYSMVDQ 313
+ R+++ +++ K M +K I ++GC +N E++ I SMV +
Sbjct: 467 RAGRFEEAERLVKTMP---VKPNVNIWGALLNGCDIH-----ENLELTDRIRSMVAE 515
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 10/240 (4%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNS+I + +A+ + M G PD T +L +CS + D+ G H ++
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
V++ + L++MY CG + + +F +PQ NVV+W +I + +AIE
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP--------DVAH 181
F +M+++G+ +E LL AC + G+++ G + G P +V
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG-LGFDPYFQSKVGFNVIL 253
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++D+ + G L A L +P + V W +++ G+ E + +L+LG
Sbjct: 254 ATSLIDMYAKCGDLRTARYLFDGMPERT-LVSWNSIITGYSQNGDAEEALCMFLDMLDLG 312
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 188/318 (59%), Gaps = 3/318 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ +WNS+IS + Q G + +F +M + P+ T+ SIL +CS +G + LGK+
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + +V + ++L++MY+K GA++ A D+F ++N V++ +I HG G
Sbjct: 544 HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMG 603
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ AI +F M+ SG+ PD ITF +LSACS+SGL++ G F M + I P HY C
Sbjct: 604 ERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCC 663
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPD-AVVWGALLGACKTFGNLEMGKQILKQLLEL--G 241
+ D+LGR G + EA ++ L + + A +WG+LLG+CK G LE+ + + ++L + G
Sbjct: 664 ITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKG 723
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ SG VLLSNMY+E Q+W + K+R+ M + G+KK S IEI G F+ D+ H
Sbjct: 724 KNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEH 783
Query: 302 EVSTSIYSMVDQLMDHLK 319
S+ IY ++D L ++
Sbjct: 784 PHSSEIYDVIDGLAKDMR 801
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 142/295 (48%), Gaps = 46/295 (15%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKK 63
+N WN++I +VQ E++ELF S ++ D T + S+ S + + LG++
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H ++ N + + + NSLM MY++CG++ + +F M +++VVSWN +I A +G
Sbjct: 340 FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGL 399
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYYFGL---- 168
E + + +M+ G D IT T LLSA S H+ L+ G + G+
Sbjct: 400 DDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYL 459
Query: 169 --MSSTFGI--------------SPDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKP 209
M S G+ D A + M+ + G + + +K+ ++P
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRP 519
Query: 210 DAVVWGALLGACKTFGNLEMGKQI----LKQLLELGRYDSGLYV--LLSNMYSES 258
+AV ++L AC G++++GKQ+ ++Q L D ++V L +MYS++
Sbjct: 520 NAVTVASILPACSQIGSVDLGKQLHGFSIRQYL-----DQNVFVASALVDMYSKA 569
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 132/275 (48%), Gaps = 38/275 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN++IS VQ G E + L M G D T+ ++LS+ S++ + +G
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF--FGMPQKNVVSWNVIIGALA 119
K+ H ++ I + + L++MY+K G ++ + +F G +++ +WN +I
Sbjct: 439 KQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYT 497
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G ++ +F KM + P+ +T +L ACS G V++G+ G + + +V
Sbjct: 498 QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNV 556
Query: 180 AHYACMVDLLGRGGFL------------------------------GE-AMSL---IQKL 205
+ +VD+ + G + GE A+SL +Q+
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+KPDA+ + A+L AC G ++ G +I +++ E+
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV 651
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 48/299 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCS-----HMG 56
M KN V+WN++IS +V+ G++AEA F M V P + V++ + S
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 57 DLALG---KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNV 113
++ G K +Y+ D + + +S ++MYA+ G ++++ +F ++N+ WN
Sbjct: 234 NVFYGLMLKLGDEYVKD------LFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 114 IIGALALHGSGKEAIEMF-EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
+IG + E+IE+F E + + + DE+T+ SA S VE+GR + G +S
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 173 FGISP------------------------------DVAHYACMVDLLGRGGFLGEAMSLI 202
F P DV + M+ + G E + L+
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 203 ---QKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSES 258
QK K D + ALL A N E+GKQ L+ G G+ L +MYS+S
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKS 466
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 16/203 (7%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMP--DNATLVSILSSCSHMGDLA 59
+P V WN+II + EA+ + RM + D T S L +C+ +L
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLK 124
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKC------GALQTAMDIFFGMPQKNVVSWNV 113
GK H ++ S + NSLMNMY C +F M +KNVV+WN
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNT 184
Query: 114 IIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM---- 169
+I G EA F M + P ++F + A S S ++ ++GLM
Sbjct: 185 LISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG 244
Query: 170 ----SSTFGISPDVAHYACMVDL 188
F +S ++ YA + D+
Sbjct: 245 DEYVKDLFVVSSAISMYAELGDI 267
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 182/313 (58%), Gaps = 1/313 (0%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSWNSIIS +V + Q +A LF RM G+ PD T ++L +C+++ LGK+ H
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + V +C++L++MY+KCG L + +F +++ V+WN +I A HG G+EA
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
I++FE+M + P+ +TF +L AC+H GL++ G YF +M +G+ P + HY+ MVD
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 748
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTF-GNLEMGKQILKQLLELGRYDSG 246
+LG+ G + A+ LI+++P + D V+W LLG C N+E+ ++ LL L DS
Sbjct: 749 ILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSS 808
Query: 247 LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTS 306
Y LLSN+Y+++ W+ + +R+ M +KK S +E+ + F+V DK H
Sbjct: 809 AYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEE 868
Query: 307 IYSMVDQLMDHLK 319
IY + + +K
Sbjct: 869 IYEELGLIYSEMK 881
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 123/257 (47%), Gaps = 23/257 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++AVSWN+II+ H Q G+ E + LF M S + PD T SIL +C+ G L G
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYG 501
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI---FFGMP-------------- 104
+ H I + + + ++ SL++MY+KCG ++ A I FF
Sbjct: 502 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHN 561
Query: 105 ---QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEM 161
Q+ VSWN II + ++A +F +M G+ PD+ T+ +L C++ +
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 162 GRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
G+ + + DV + +VD+ + G L ++ + +K ++ D V W A++
Sbjct: 622 GKQIHAQVIKK-ELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGY 679
Query: 222 KTFGNLEMGKQILKQLL 238
G E Q+ ++++
Sbjct: 680 AHHGKGEEAIQLFERMI 696
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P KN+VSW++II+ VQ + A++ F M + S+L SC+ + +L LG
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + ++ + + ++MYAKC +Q A +F N S+N +I +
Sbjct: 301 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE 360
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+ +F ++ +SGL DEI+ +G+ AC+ + G +GL + +S DV
Sbjct: 361 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS-SLSLDVCV 419
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
+D+ G+ L EA + ++ + DAV W A++ A + G
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MMPV++ VSWNS++S ++Q G+ +++E+F M G+ D T IL CS + D +L
Sbjct: 139 MMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSL 198
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + V ++L++MYAK ++ +F G+P+KN VSW+ II
Sbjct: 199 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 258
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG 162
+ A++ F++M+ + + +L +C+ + +G
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N S+N++I+ + QE +A+ LF R+ SG+ D +L + +C+ + L+ G + +
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+++++ V + N+ ++MY KC AL A +F M +++ VSWN II A +G G
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E + +F M S + PDE TF +L AC+ L + ++ S G++ + + +
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKS--GMASNSSVGCSL 523
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPD 210
+D+ + G + EA + + + +
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRAN 548
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 33 MCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGA 92
M +SG P L +L ++ D + + D V N ++N Y+K
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFV----SASMVFDKMPLRDVVSWNKMINGYSKSND 129
Query: 93 LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
+ A F MP ++VVSWN ++ +G ++IE+F M G+ D TF +L
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAV 212
CS +G G++ G DV + ++D+ +G E++ + Q +P K ++V
Sbjct: 190 CSFLEDTSLGMQIHGIVVRV-GCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSV 247
Query: 213 VWGALLGACKTFGNLEMGKQILKQL 237
W A++ C L + + K++
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEM 272
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WN++I + G+ EA++LF RM + + P++ T +SIL +C+HMG L K
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG---LIDKG 723
Query: 65 HDYIC----DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
+Y D + + ++++++ K G ++ A+++ MP + + V W ++G
Sbjct: 724 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 783
Query: 120 LHGSGKEAIE 129
+H + E E
Sbjct: 784 IHRNNVEVAE 793
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 200/323 (61%), Gaps = 1/323 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSWN++I+ ++Q G A+ +F +M + G+ +++ + +CS + L LG
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++AH Y + + + SL++MYAK G++ + +F G+ +K+ SWN +I +H
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G KEAI++FE+M+ +G PD++TF G+L+AC+HSGL+ G Y M S+FG+ P++ H
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 182 YACMVDLLGRGGFLGEAMSLI-QKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
YAC++D+LGR G L +A+ ++ +++ + D +W +LL +C+ NLEMG+++ +L EL
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 796
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
YVLLSN+Y+ +W+D++K+R+ MN+ ++K S IE++ + F+V ++
Sbjct: 797 EPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERF 856
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
+ I S+ L + +GY
Sbjct: 857 LDGFEEIKSLWSILEMKISKMGY 879
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 119/274 (43%), Gaps = 43/274 (15%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS----GVMPDNATLVSILSSCSHMG 56
+MP +N VSWNS+I G E+ L M MPD ATLV++L C+
Sbjct: 247 IMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARER 306
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
++ LGK H + + + L N+LM+MY+KCG + A IF KNVVSWN ++G
Sbjct: 307 EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVG 366
Query: 117 ALALHGSGKEAIEMFEKMRASG--LFPDEITFTGLLSACSHS----GLVEMGRY------ 164
+ G ++ +M A G + DE+T + C H L E+ Y
Sbjct: 367 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 426
Query: 165 -YFGLMSSTF------------------GI-SPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
Y L+++ F GI S V + ++ G +SL
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG--GHAQSNDPRLSLDAH 484
Query: 205 LPMK-----PDAVVWGALLGACKTFGNLEMGKQI 233
L MK PD+ +LL AC +L +GK++
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 11/241 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K SWN++I H Q +++ +M +SG++PD+ T+ S+LS+CS + L LGK+
Sbjct: 459 KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H +I N + + + S++++Y CG L T +F M K++VSWN +I +G
Sbjct: 519 HGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFP 578
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR--YYFGLMSSTFGISPDVAHY 182
A+ +F +M G+ I+ + ACS + +GR + + L + D A
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH----LLEDDAFI 634
Query: 183 AC-MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
AC ++D+ + G + ++ + L K A W A++ G + K+ +K E+
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTA-SWNAMIMGYGIHG---LAKEAIKLFEEMQ 690
Query: 242 R 242
R
Sbjct: 691 R 691
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 7/242 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLALGKK 63
KN WN++IS + + + E +E F M + ++PD+ T ++ +C+ M D+ +G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + V + N+L++ Y G + A+ +F MP++N+VSWN +I + +G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 124 GKEAI----EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+E+ EM E+ PD T +L C+ + +G+ G + + ++
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG-WAVKLRLDKEL 327
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + G + A +I K+ + V W ++G G+ +L+Q+L
Sbjct: 328 VLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 240 LG 241
G
Sbjct: 387 GG 388
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 4/239 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG--VMPDNATLVSILSSCSHMGDLALGK 62
KN VSWN+++ EG ++ +M G V D T+++ + C H L K
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 415
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H Y + + N+ + YAKCG+L A +F G+ K V SWN +IG A
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+ +++ +M+ SGL PD T LLSACS + +G+ G + + + D+ Y
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVY 534
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++ L G L +L + K V W ++ G + + +Q++ G
Sbjct: 535 LSVLSLYIHCGELCTVQALFDAMEDKS-LVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Query: 48 ILSSCSHMGDLALGKKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
+L + D+ +G+K H + + LC ++ MYA CG+ + +F + K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 107 NVVSWNVIIGALALHGSGKEAIEMF-EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY 165
N+ WN +I + + + E +E F E + + L PD T+ ++ AC+ V +G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 166 FGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
GL+ T G+ DV +V G GF+ +A+ L +P + + V W +++ G
Sbjct: 210 HGLVVKT-GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER-NLVSWNSMIRVFSDNG 267
Query: 226 NLEMGKQILKQLLE 239
E +L +++E
Sbjct: 268 FSEESFLLLGEMME 281
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 192/326 (58%), Gaps = 3/326 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M ++ V+WNS+IS ++ A+A++L M +G D+ ++LS+ + + L
Sbjct: 578 MAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLER 637
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + V + ++L++MY+KCG L A+ F MP +N SWN +I A
Sbjct: 638 GMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR 697
Query: 121 HGSGKEAIEMFEKMRASGLFP-DEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG G+EA+++FE M+ G P D +TF G+LSACSH+GL+E G +F MS ++G++P +
Sbjct: 698 HGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRI 757
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA-CKTFGN-LEMGKQILKQL 237
H++CM D+LGR G L + I+K+PMKP+ ++W +LGA C+ G E+GK+ + L
Sbjct: 758 EHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEML 817
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+L ++ YVLL NMY+ RW+D+ K RK M D+ +KK S + + + F+
Sbjct: 818 FQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAG 877
Query: 298 DKNHEVSTSIYSMVDQLMDHLKSVGY 323
DK+H + IY + +L ++ GY
Sbjct: 878 DKSHPDADVIYKKLKELNRKMRDAGY 903
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M K++VSWNS+I+ Q G EA+E + M ++P + TL+S LSSC+ + L
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H I ++V++ N+LM +YA+ G L IF MP+ + VSWN IIGALA
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 121 -HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
S EA+ F + +G + ITF+ +LSA S E+G+ GL I+ +
Sbjct: 494 SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN-NIADEA 552
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++ G+ G + + ++ + D V W +++ L ++ +L+
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 240 LG-RYDSGLYVLLSNMYS 256
G R DS +Y + + ++
Sbjct: 613 TGQRLDSFMYATVLSAFA 630
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 36/240 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL- 60
MP++N VSW I+S + + G+H EA+ M G+ + VS+L +C +G + +
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL 121
Query: 61 -GKKAHDYICDNNITVSVTLCNSLMNMYAKC-GALQTAMDIFFGMPQKNVVSWNVIIGAL 118
G++ H + + V + N L++MY KC G++ A+ F + KN VSWN II
Sbjct: 122 FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLL-SACSHSGLVEMGRYYFGLMSSTFGISP 177
+ G + A +F M+ G P E TF L+ +ACS L E P
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTE----------------P 222
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
DV L + M IQK + D V L+ A G+L +++ Q+
Sbjct: 223 DVR-------------LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDN-ATLVSILSSCSHMGDLA 59
M +NAV+ N ++ V++ EA +LF M + V P++ L+S S ++
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 60 L--GKKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
L G++ H ++ + V + N L+NMYAKCG++ A +F+ M K+ VSWN +I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
L +G EA+E ++ MR + P T LS+C+ ++G+ G S GI
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG-ESLKLGID 447
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+V+ ++ L G+L E + +P + D V W +++GA
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 42 NATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF 101
N +S + SC +G + H + N + V LCN+L+N Y + G +A +F
Sbjct: 3 NCVPLSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFD 60
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEM 161
MP +N VSW I+ + +G KEA+ M G+F ++ F +L AC G V +
Sbjct: 61 EMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGI 120
Query: 162 --GRYYFGLM 169
GR GLM
Sbjct: 121 LFGRQIHGLM 130
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 182/320 (56%), Gaps = 1/320 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K AVSW S+IS Q G +A E M G PD TLV +L +CS +G L G
Sbjct: 278 MMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H YI ++ VT +LM+MY+KCGAL ++ +IF + +K++V WN +I +H
Sbjct: 338 RLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIH 396
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+G+E + +F KM S + PD TF LLSA SHSGLVE G+++F +M + + I P H
Sbjct: 397 GNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKH 456
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C++DLL R G + EA+ +I + +W ALL C NL +G ++L+L
Sbjct: 457 YVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLN 516
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
G+ L+SN ++ + +W ++ K+RK+M + ++K S+IE++G F+++D +H
Sbjct: 517 PDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Query: 302 EVSTSIYSMVDQLMDHLKSV 321
+ ++ L ++ V
Sbjct: 577 HEHYHMLQVLRNLKTEIRDV 596
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%), Gaps = 6/239 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ + W ++++ Q G+ +A+E + M G D ++ +L + +GD +G
Sbjct: 177 MAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG 236
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ + ++V + SL++MYAK G ++ A +F M K VSW +I A +
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A E +M++ G PD +T G+L ACS G ++ GR + + D
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL--DRVT 354
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
++D+ + G L + + + + K D V W ++ GN G++++ L++
Sbjct: 355 ATALMDMYSKCGALSSSREIFEHVGRK-DLVCWNTMISCYGIHGN---GQEVVSLFLKM 409
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 14/223 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + +NS+I + + E + L+ +M + PD++T + +C + L L
Sbjct: 76 LPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC--LSGLVLE 133
Query: 62 K------KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
K KA D+ N++ V C+S++N+Y KCG + A +F M +++V+ W ++
Sbjct: 134 KGEAVWCKAVDFGYKNDVFV----CSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMV 189
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
A G +A+E + +M+ G D + GLL A G +MGR G + T G+
Sbjct: 190 TGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT-GL 248
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+V +VD+ + GF+ A + ++ K AV WG+L+
Sbjct: 249 PMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKT-AVSWGSLI 290
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
I N+ ++ L+ + G + A +F +PQ+ V +N +I + + E
Sbjct: 41 ISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEV 100
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+ ++++M A + PD TFT + AC ++E G + + FG DV + +++
Sbjct: 101 LRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVW-CKAVDFGYKNDVFVCSSVLN 159
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
L + G + EA L K+ K D + W ++
Sbjct: 160 LYMKCGKMDEAEVLFGKMA-KRDVICWTTMV 189
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 193/328 (58%), Gaps = 9/328 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ V+W ++I+ + Q G+ +EA +LF M +GV PD TL ++LS+C +G L LG
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ + + ++ ++ + L++MY KCG ++ A+ +F MP KN +WN +I A A
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G KEA+ +F++M P +ITF G+LSAC H+GLV G YF MSS FG+ P + H
Sbjct: 414 GHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y ++DLL R G L EA +++ P KPD ++ A+LGAC ++ + ++ ++ L+E+
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMK 530
Query: 242 R-YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK- 299
++G YV+ SN+ ++ + WD+ K+R +M D G+ K S IEI+G +F+
Sbjct: 531 EAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDY 590
Query: 300 ---NHEVSTSIYS-MVDQLMDHLKSVGY 323
E S S++ +V+++ GY
Sbjct: 591 LQCGREDSGSLFDLLVEEMKRERYEFGY 618
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 125/216 (57%), Gaps = 2/216 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ VSWNS+IS + + G +AM+LF +M G PD TLVS+L +CSH+GDL G+
Sbjct: 196 RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ I +S L + L++MY KCG L +A +F M +K+ V+W +I + +G
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKS 315
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA ++F +M +G+ PD T + +LSAC G +E+G+ +S + ++
Sbjct: 316 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK-QIETHASELSLQHNIYVATG 374
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+VD+ G+ G + EA+ + + +P+K +A W A++ A
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEA-TWNAMITA 409
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 23 HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNS 82
H A+ L+ RM SG+ PD T + +C+ + ++ +G+ H + + V + +S
Sbjct: 113 HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHS 172
Query: 83 LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPD 142
L+ MYAKCG + A +F + +++ VSWN +I + G K+A+++F KM G PD
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 232
Query: 143 EITFTGLLSACSHSGLVEMGRYY--------FGLMS-------STFG------------- 174
E T +L ACSH G + GR GL + S +G
Sbjct: 233 ERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 175 --ISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEM 229
I D + M+ + + G EA L ++K + PDA +L AC + G LE+
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 230 GKQILKQLLELGRYDSGLYVL--LSNMYSESQRWDDMKKIRKIM 271
GKQI EL +YV L +MY + R ++ ++ + M
Sbjct: 353 GKQIETHASELS-LQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 195/319 (61%), Gaps = 6/319 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + V W+ +++ +V+ G +E +E+F M V G+ PD ++ + L++C+ +G LA G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 237
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K H+++ + I V + +L++MYAKCG ++TA+++F + ++NV SW +IG A
Sbjct: 238 KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAA 297
Query: 121 HGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G K+A+ E++ R G+ PD + G+L+AC+H G +E GR M + + I+P
Sbjct: 298 YGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKH 357
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+C+VDL+ R G L +A++LI+K+PMKP A VWGALL C+T N+E+G+ +K LL+
Sbjct: 358 EHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLD 417
Query: 240 LGR----YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFM 295
L + + V LSN+Y QR + K+R ++ G++K S +E+DG +F+
Sbjct: 418 LEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFV 477
Query: 296 VDDKNHEVSTSIYSMVDQL 314
D +H I++++ L
Sbjct: 478 SGDVSHPNLLQIHTVIHLL 496
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS---GVMPDNATLVSILSSCSHMGDL 58
+ + N+ ++++I + Q + F M + P T ++ +C
Sbjct: 73 IEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFF 132
Query: 59 ALGKKAHDYICDNNITVSVTLCNS-LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
++GK+ H ++ N + +S + + ++ +Y + L A +F +PQ +VV W+V++
Sbjct: 133 SVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNG 192
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
G G E +E+F +M GL PDE + T L+AC+ G + G++ + I
Sbjct: 193 YVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIES 252
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
DV +VD+ + G + A+ + +KL + + W AL+G +G + L++L
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRR-NVFSWAALIGGYAAYGYAKKAMTCLERL 311
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 196/326 (60%), Gaps = 11/326 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + V W+ +++ +V+ G +E +E+F M V G+ PD ++ + L++C+ +G LA G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG 237
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K H+++ I V + +L++MYAKCG ++TA+++F + ++NV SW +IG A
Sbjct: 238 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAA 297
Query: 121 HGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G K+A +++ R G+ PD + G+L+AC+H G +E GR M + +GI+P
Sbjct: 298 YGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKH 357
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+C+VDL+ R G L +A+ LI+K+PMKP A VWGALL C+T N+E+G+ ++ LL+
Sbjct: 358 EHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLD 417
Query: 240 LGR----YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFM 295
L + + V LSN+Y QR + K+R ++ GI+K S +E+DG +F+
Sbjct: 418 LEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFV 477
Query: 296 VDDKNHEVSTSIYSMVDQLMDHLKSV 321
D +H I++++ HL SV
Sbjct: 478 SGDVSHPNLLQIHTLI-----HLLSV 498
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS---GVMPDNATLVSILSSCSHMGDL 58
+ + N+ ++++I + Q + F M + P T ++ +C
Sbjct: 73 IEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFF 132
Query: 59 ALGKKAHDYICDNNITVSVTLCNS-LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
++GK+ H ++ N + +S + ++ +Y + L A +F +PQ +VV W+V++
Sbjct: 133 SVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNG 192
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
G G E +E+F++M G+ PDE + T L+AC+ G + G++ + I
Sbjct: 193 YVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIES 252
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
DV +VD+ + G + A+ + +KL + + W AL+G +G
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRR-NVFSWAALIGGYAAYG 299
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 181/322 (56%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +++ + WN++IS +VQ+G E + ++ M + ++PD T S+ +CS + L G
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+AH + I ++ + ++L++MY KC + +F + +NV++W +I H
Sbjct: 229 KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G E ++ FEKM+ G P+ +TF +L+AC+H GLV+ G +F M +GI P+ H
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQH 348
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YA MVD LGR G L EA + K P K VWG+LLGAC+ GN+++ + + LEL
Sbjct: 349 YAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELD 408
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ G YV+ +N Y+ + K+R+ M ++G+KK S IE+ G ++FM DD +H
Sbjct: 409 PTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSH 468
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
+S IY V ++ + Y
Sbjct: 469 RLSEKIYKKVHEMTSFFMDIDY 490
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 36 SGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQT 95
SG+ + T +L C + GK+ H + ++ L L+ +YA G LQT
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 96 AMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSH 155
A +F + ++++ WN +I G +E + ++ MR + + PD+ TF + ACS
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSA 221
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWG 215
+E G+ +M I ++ + +VD+ + + + +L + + + W
Sbjct: 222 LDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWT 279
Query: 216 ALLGACKTFGNLEMGKQILKQLLELG 241
+L+ G + + +++ E G
Sbjct: 280 SLISGYGYHGKVSEVLKCFEKMKEEG 305
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 190/315 (60%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSW S+IS G +EA+ELF RM +G+ D+ L+ ILS+ + + L G++
Sbjct: 550 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREI 609
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y+ + ++ ++++MYA CG LQ+A +F + +K ++ + +I A +HG G
Sbjct: 610 HCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCG 669
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
K A+E+F+KMR + PD I+F LL ACSH+GL++ GR + +M + + P HY C
Sbjct: 670 KAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVC 729
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VD+LGR + EA ++ + +P A VW ALL AC++ E+G+ ++LLEL +
Sbjct: 730 LVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKN 789
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
G VL+SN+++E RW+D++K+R M SG++K S IE+DG ++F DK+H S
Sbjct: 790 PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPES 849
Query: 305 TSIYSMVDQLMDHLK 319
IY + ++ L+
Sbjct: 850 KEIYEKLSEVTRKLE 864
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+AV WNSI+S + G+ E +ELF M ++G P++ T+VS L++C LGK+ H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 66 DYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ ++ S + +CN+L+ MY +CG + A I M +VV+WN +I +
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSA 152
KEA+E F M A+G DE++ T +++A
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 111/220 (50%), Gaps = 6/220 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + A +WN++I +V G+ A A+ L+ M V GV ++ ++L +C+ + D+ G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALAL 120
+ H + + + N+L++MYAK L A +F G +K + V WN I+ + +
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G E +E+F +M +G P+ T L+AC ++G+ + + S ++
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL- 320
Query: 181 HYAC--MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
Y C ++ + R G + +A +++++ D V W +L+
Sbjct: 321 -YVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 113/238 (47%), Gaps = 7/238 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+WNS+I +VQ + EA+E F M +G D ++ SI+++ + +L G + H
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y+ + ++ + N+L++MY+KC F M K+++SW +I A +
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACS--HSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EA+E+F + + DE+ +L A S S L+ + L D
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL----DTVIQN 525
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+VD+ G+ +G A + + + K D V W +++ + GN ++ ++++E G
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 34/264 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SW ++I+ + Q H EA+ELF + + D L SIL + S + + + K+
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H +I + +V + N L+++Y KC + A +F + K+VVSW +I + AL+G+
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDVA--- 180
EA+E+F +M +GL D + +LSA + + GR + L+ F + +A
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 181 --HYAC---------MVDLLGRGGFL---------------GEAMSLIQKLP---MKPDA 211
YAC + D + R G L A+ L K+ + PD
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688
Query: 212 VVWGALLGACKTFGNLEMGKQILK 235
+ + ALL AC G L+ G+ LK
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLK 712
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 116/298 (38%), Gaps = 61/298 (20%)
Query: 28 ELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVT-LCNSLMNM 86
E F R+ VS +L C ++ G++ H I + + L L+ M
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125
Query: 87 YAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
Y KCG+L A +F MP + +WN +IGA +G A+ ++ MR G+ +F
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 147 TGLLSACS-----------HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFL 195
LL AC+ HS LV++G + G + + +V + + L
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNA------------LVSMYAKNDDL 233
Query: 196 GEAMSLIQKLPMKPDAVVWGALLG-----------------------------------A 220
A L K DAV+W ++L A
Sbjct: 234 SAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA 293
Query: 221 CKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKKIRKIMNDSGI 276
C F ++GK+I +L+ + S LYV L MY+ + ++I + MN++ +
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 182/319 (57%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+ VSWN++I Q G+ +A+ F +M V PD T VS++++ + + K
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + +V + +L++MYAKCGA+ A IF M +++V +WN +I HG G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
K A+E+FE+M+ + P+ +TF ++SACSHSGLVE G F +M + I + HY
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G L EA I ++P+KP V+GA+LGAC+ N+ ++ ++L EL D
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
G +VLL+N+Y + W+ + ++R M G++K S +EI + F H S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY+ +++L+ H+K GY
Sbjct: 701 KKIYAFLEKLICHIKEAGY 719
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 124/217 (57%), Gaps = 2/217 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWN+I++ + Q G A+E+ MC + P T+VS+L + S + +++G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y + V + +L++MYAKCG+L+TA +F GM ++NVVSWN +I A +
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ KEA+ +F+KM G+ P +++ G L AC+ G +E GR+ L S G+ +V+
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL-SVELGLDRNVSV 374
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++ + + + A S+ KL + V W A++
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMI 410
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 126/259 (48%), Gaps = 33/259 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNS+I +VQ EAM +F +M GV P + +++ L +C+ +GDL G+
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + +V++ NSL++MY KC + TA +F + + +VSWN +I A +G
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM------SSTFGISPD 178
+A+ F +MR+ + PD T+ +++A + + ++ G++ + F +
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 179 VAHYA------------------------CMVDLLGRGGFLGEAMSL---IQKLPMKPDA 211
V YA M+D G GF A+ L +QK +KP+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 212 VVWGALLGACKTFGNLEMG 230
V + +++ AC G +E G
Sbjct: 540 VTFLSVISACSHSGLVEAG 558
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
+A++ F RM V P +L C +L +GK+ H + + ++ + L
Sbjct: 118 KALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLE 177
Query: 85 NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
NMYAKC + A +F MP++++VSWN I+ + +G + A+EM + M L P I
Sbjct: 178 NMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFI 237
Query: 145 TFTGLLSACSHSGLVEMGRYYFGL-MSSTFG----------------------------- 174
T +L A S L+ +G+ G M S F
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKP-DAVVWGALLGACKTFGNLEMG 230
+ +V + M+D + EAM + QK+ +KP D V GA L AC G+LE G
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA-LHACADLGDLERG 356
Query: 231 KQILKQLLELG 241
+ I K +ELG
Sbjct: 357 RFIHKLSVELG 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MM ++ +WN++I + G A+ELF M + P+ T +S++S+CSH G +
Sbjct: 498 MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEA 557
Query: 61 GKKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS-WNVIIGAL 118
G K + +N +I +S+ +++++ + G L A D MP K V+ + ++GA
Sbjct: 558 GLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617
Query: 119 ALHG----SGKEAIEMFEKMRASGLFPDEITFTGLLS 151
+H + K A +FE L PD+ + LL+
Sbjct: 618 QIHKNVNFAEKAAERLFE------LNPDDGGYHVLLA 648
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN 107
+L CS + +L ++ + N + L++++ + G++ A +F + K
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 108 VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG 167
V ++ ++ A +A++ F +MR + P FT LL C + +G+ G
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 168 LMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL 227
L+ + G S D+ + ++ + + EA + ++P + D V W ++ G
Sbjct: 160 LLVKS-GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER-DLVSWNTIVAGYSQNGMA 217
Query: 228 EMGKQILKQLLE 239
M +++K + E
Sbjct: 218 RMALEMVKSMCE 229
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 183/313 (58%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
++VSWN+I++ +Q Q E + LF M VS PD+ T+ ++L C + L LG + H
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y + + N L++MYAKCG+L A IF M ++VVSW+ +I A G G+
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ +F++M+++G+ P+ +TF G+L+ACSH GLVE G + M + GISP H +C+
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLL R G L EA I ++ ++PD VVW LL ACKT GN+ + ++ + +L++ ++S
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNS 676
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
+VLL +M++ S W++ +R M +KK S IEI+ + F +D H
Sbjct: 677 TAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERD 736
Query: 306 SIYSMVDQLMDHL 318
IY+++ + +
Sbjct: 737 DIYTVLHNIWSQM 749
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 11/246 (4%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MP +N VS+ S+I+ + Q GQ AEA+ L+ +M ++PD SI+ +C+ D+ L
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H + + + N+L+ MY + + A +F+G+P K+++SW+ II +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 121 HGSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G EA+ ++M + G+F P+E F L ACS + G GL I ++
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC-----IKSEL 301
Query: 180 AHYA----CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
A A + D+ R GFL A + ++ +PD W ++ G + +
Sbjct: 302 AGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 236 QLLELG 241
Q+ G
Sbjct: 361 QMRSSG 366
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 2/211 (0%)
Query: 44 TLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM 103
T +S++ +CS LA G+K HD+I ++N L N +++MY KCG+L+ A ++F M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 104 PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
P++N+VS+ +I + +G G EAI ++ KM L PD+ F ++ AC+ S V +G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 164 YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKT 223
+ S +A A ++ + R + +A + +PMK D + W +++
Sbjct: 189 QLHAQVIKLESSSHLIAQNA-LIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAGFSQ 246
Query: 224 FGNLEMGKQILKQLLELGRYDSGLYVLLSNM 254
G LK++L G + Y+ S++
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 2/221 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLAL 60
+P+K+ +SW+SII+ Q G EA+ M GV P+ S L +CS +
Sbjct: 229 IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + + + SL +MYA+CG L +A +F + + + SWNVII LA
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G EA+ +F +MR+SG PD I+ LL A + + G + +G D+
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLT 407
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
++ + L +L + D+V W +L AC
Sbjct: 408 VCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 6/155 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSW+++I + Q G EA+ LF M +G+ P++ T V +L++CSH+G + G
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 62 KKAHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
K + + ++ I+ + C+ ++++ A+ G L A M + +VV W ++ A
Sbjct: 594 LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK 653
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
G+ + + +K + L D T + CS
Sbjct: 654 TQGN----VHLAQKAAENILKIDPFNSTAHVLLCS 684
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 177/285 (62%), Gaps = 4/285 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKK 63
K+ SWN++IS + Q A+ LF M S V PD T+VS+ S+ S +G L GK+
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR 459
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF---GMPQKNVVSWNVIIGALAL 120
AHDY+ + I + L ++++MYAKCG+++TA++IF + + WN II A
Sbjct: 460 AHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG K A++++ +++ + P+ ITF G+LSAC H+GLVE+G+ YF M S GI PD+
Sbjct: 520 HGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIK 579
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY CMVDLLG+ G L EA +I+K+P+K D ++WG LL A +T GN+E+ + +L +
Sbjct: 580 HYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAI 639
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
G V+LSN+Y+++ RW+D+ +R+ M ++ RA S +
Sbjct: 640 DPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 8/189 (4%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP ++ VS+ ++I + Q Q +EAMELF M G+M + TL +++S+CSH+G +
Sbjct: 132 VMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWD 191
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ + V + +L++MY C L+ A +F MP++N+V+WNV++ +
Sbjct: 192 CRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSK 251
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G ++A E+F+++ D +++ ++ C ++ Y+ M G+ P
Sbjct: 252 AGLIEQAEELFDQITE----KDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC-GMKPS-- 304
Query: 181 HYACMVDLL 189
MVDLL
Sbjct: 305 -EVMMVDLL 312
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 43/231 (18%)
Query: 45 LVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG-- 102
LVS L SC+ D+ G++ H + + + + +CNS++NMYAKC L A +F
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 103 -----------------------------MPQKNVVSWNVIIGALALHGSGKEAIEMFEK 133
MP+++ VS+ +I A + EA+E+F +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 134 MRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-----MSSTFGISPDVAHYACMVDL 188
MR G+ +E+T ++SACSH G + R L + +S ++ H C+
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
L +A L ++P + + V W +L G +E +++ Q+ E
Sbjct: 224 ------LKDARKLFDEMPER-NLVTWNVMLNGYSKAGLIEQAEELFDQITE 267
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 70/302 (23%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILS-SCSHMG------- 56
K+ VSW ++I +++ Q EA+ + M G+ P +V +LS S +G
Sbjct: 268 KDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQL 327
Query: 57 ------------DLALGKKAHDYICDNNITVS-----------VTLCNSLMNMYAKCGAL 93
D H Y N+I ++ + N+L+ + K G +
Sbjct: 328 HGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMV 387
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM-RASGLFPDEITFTGLLSA 152
+ A ++F K++ SWN +I A S + A+ +F +M +S + PD IT + SA
Sbjct: 388 EQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 447
Query: 153 CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL----------- 201
S G +E G+ ++ + I P+ A ++D+ + G + A+++
Sbjct: 448 ISSLGSLEEGKRAHDYLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSST 506
Query: 202 --------------------------IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+Q LP+KP+++ + +L AC G +E+GK +
Sbjct: 507 ISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFE 566
Query: 236 QL 237
+
Sbjct: 567 SM 568
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 188/322 (58%), Gaps = 1/322 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N V+W+ ++ + Q G++ EA+ LF + ++ + S++S C++ L LG
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H ++ S + +SL+++Y+KCG + A +F +P KN+ WN ++ A A H
Sbjct: 237 RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQH 296
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++ IE+F++M+ SG+ P+ ITF +L+ACSH+GLV+ GRYYF M + I P H
Sbjct: 297 SHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKH 355
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YA +VD+LGR G L EA+ +I +P+ P VWGALL +C N E+ ++ ELG
Sbjct: 356 YASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELG 415
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
SG+++ LSN Y+ R++D K RK++ D G KK +S +E + F ++ H
Sbjct: 416 PVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRH 475
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
E S IY + +L + ++ GY
Sbjct: 476 EKSKEIYEKLAELGEEMEKAGY 497
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 121/235 (51%), Gaps = 2/235 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K++ +W+SIISC Q ++E +M + PD+ L S SC+ + +G+
Sbjct: 77 PQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGR 136
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H V + +SL++MYAKCG + A +F MPQ+NVV+W+ ++ A G
Sbjct: 137 SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+EA+ +F++ L ++ +F+ ++S C++S L+E+GR GL + S
Sbjct: 197 ENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDS-SSFVG 255
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ +V L + G A + ++P+K + +W A+L A + + ++ K++
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQKVIELFKRM 309
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H Y+ + +++ + N+L+N Y+K + F PQK+ +W+ II A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ ++E +KM A L PD+ +C+ ++GR L T G DV
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKT-GYDADVF 152
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ +VD+ + G + A + ++P + + V W ++ G E + K+ L
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQR-NVVTWSGMMYGYAQMGENEEALWLFKEAL 209
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 184/326 (56%), Gaps = 4/326 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K V+WN++I+ + G EA+ L M SGV D TL ++ + + L L
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELT 344
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+AH + N + +L++ Y+K G + TA +F +P+KN++SWN ++G A H
Sbjct: 345 KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G +A+++FEKM A+ + P+ +TF +LSAC++SGL E G F MS GI P H
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACM++LLGR G L EA++ I++ P+K +W ALL AC+ NLE+G+ + ++L +G
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMG 524
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK-- 299
G YV++ NMY+ + + + + + G+ A + +E+ + F+ D+
Sbjct: 525 PEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFD 584
Query: 300 --NHEVSTSIYSMVDQLMDHLKSVGY 323
N V IY VD+LM+ + GY
Sbjct: 585 SYNETVKRQIYQKVDELMEEISEYGY 610
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P +N S+ SIIS V G + EA ELF M + T +L + + +G + +G
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + + L++MY+KCG ++ A F MP+K V+WN +I ALH
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+ + MR SG+ D+ T + ++ + +E+ + + G ++
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN-GFESEIVA 362
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
+VD + G + A + KLP K + + W AL+G G
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGGYANHGR 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
E +E+ C V GV +T +++ +C + + K+ + ++ N + N ++
Sbjct: 111 EILEIRCSFKV-GV----STYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRIL 165
Query: 85 NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
M+ KCG + A +F +P++N+ S+ II G+ EA E+F+ M +
Sbjct: 166 LMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETH 225
Query: 145 TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
TF +L A + G + +G+ + + G+ + ++D+ + G + +A +
Sbjct: 226 TFAVMLRASAGLGSIYVGK-QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC 284
Query: 205 LPMKPDAVVWGALLGACKTFGNLE 228
+P K V W ++ G E
Sbjct: 285 MPEKT-TVAWNNVIAGYALHGYSE 307
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 182/321 (56%), Gaps = 2/321 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLA 59
++PVKN SW ++IS VQ G+ EA +F M V + D L SI+ +C+++
Sbjct: 196 ILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASI 255
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G++ H + V + N+L++MYAKC + A DIF M ++VVSW +I +A
Sbjct: 256 AGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 315
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG ++A+ +++ M + G+ P+E+TF GL+ ACSH G VE GR F M+ +GI P +
Sbjct: 316 QHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSL 375
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY C++DLLGR G L EA +LI +P PD W ALL ACK G +MG +I L+
Sbjct: 376 QHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS 435
Query: 240 LGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
+ D Y+LLSN+Y+ + W + + R+ + + ++K SS+E+ F +
Sbjct: 436 SFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGE 495
Query: 299 KNHEVSTSIYSMVDQLMDHLK 319
+H + I+ ++ +L + ++
Sbjct: 496 TSHPLKEDIFRLLKKLEEEMR 516
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 125/259 (48%), Gaps = 40/259 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLAL 60
MP ++ ++W S+++ Q + + +F + S + PD+ +++ +C+++G +
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H + + + +SL++MYAKCG L +A +F + KN +SW ++ A
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +EA+E+F + L+ ++T L+ SG V+ G+ GL F + ++
Sbjct: 184 SGRKEEALELFRILPVKNLY----SWTALI-----SGFVQSGK---GL--EAFSVFTEMR 229
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
VD+L D +V +++GAC G+Q+ ++ L
Sbjct: 230 RE--RVDIL--------------------DPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 241 GRYDSGLYV--LLSNMYSE 257
G +DS +++ L +MY++
Sbjct: 268 G-FDSCVFISNALIDMYAK 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 49 LSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV 108
L C+ L K H +I I L N+L+N+Y KCGA A+ +F MP ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 109 VSWNVIIGAL-ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYF 166
++W ++ AL + SGK +SGL PD+ F+ L+ AC++ G ++ GR +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 167 GLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
+ S + + D + +VD+ + G L A ++ + +K + + W A++ G
Sbjct: 130 HFIVSEY--ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGR 186
Query: 227 LEMGKQILKQL 237
E ++ + L
Sbjct: 187 KEEALELFRIL 197
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 186/315 (59%), Gaps = 6/315 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N VSWNSI++ V+ G+ E FC M PD T+V +LS+C G+L+LG
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLG 231
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + ++ L +L++MYAK G L+ A +F M KNV +W+ +I LA +
Sbjct: 232 KLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQY 291
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +EA+++F KM + S + P+ +TF G+L ACSH+GLV+ G YF M I P +
Sbjct: 292 GFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMI 351
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE---MGKQILKQL 237
HY MVD+LGR G L EA I+K+P +PDAVVW LL AC + + +G+++ K+L
Sbjct: 352 HYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRL 411
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+EL SG V+++N ++E++ W + ++R++M ++ +KK S +E+ G ++F
Sbjct: 412 IELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG 471
Query: 298 DKNHEVSTSIYSMVD 312
SIY ++D
Sbjct: 472 YDPRSEYVSIYELLD 486
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 42/266 (15%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+WN + + E++ ++ M G+ P+ T +L +C+ L G++ +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ V + N+L+++Y C A +F M ++NVVSWN I+ AL +G
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 129 EMFEKMRASGLFPDEITFTGLLSAC---------------------------------SH 155
E F +M PDE T LLSAC +
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAK 259
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL----PMKPDA 211
SG +E R F M + +V ++ M+ L + GF EA+ L K+ ++P+
Sbjct: 260 SGGLEYARLVFERM-----VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 212 VVWGALLGACKTFGNLEMGKQILKQL 237
V + +L AC G ++ G + ++
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEM 340
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 170/273 (62%), Gaps = 1/273 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++WN++I+ +V Q +A+ LF RM P + TLV++L +C + G L G+ H
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 556
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
YI + ++++L +L++MYAKCG L+ + ++F QK+ V WNV+I +HG +
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
AI +F++M S + P TF LLSAC+H+GLVE G+ F L + + P++ HY+C+
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCL 675
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLL R G L EA S + +P PD V+WG LL +C T G EMG ++ ++ + +
Sbjct: 676 VDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND 735
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
G Y++L+NMYS + +W++ ++ R++M +SG+ K
Sbjct: 736 GYYIMLANMYSAAGKWEEAERAREMMRESGVGK 768
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 125/234 (53%), Gaps = 3/234 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +WN+++ + + H + +ELF ++ G+ D+A+ S++SSCSH+G + LGK H
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y+ ++ +++++ NSL+++Y K G L A +F NV++WN +I + +
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSE 515
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+AI +F++M + P IT LL AC ++G +E G+ ++ T +++ A +
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET-EHEMNLSLSAAL 574
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+D+ + G L ++ L K DAV W ++ G++E + Q+ E
Sbjct: 575 IDMYAKCGHLEKSRELFDAGNQK-DAVCWNVMISGYGMHGDVESAIALFDQMEE 627
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV---MPDNATLVSILSSCSHMGDL 58
MP ++ V+W +IIS HVQ G+ + C+M +G P+ TL +CS++G L
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
G+ H + N + S + +S+ + Y+K G A F + +++ SW II +L
Sbjct: 247 KEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASL 306
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM 169
A G +E+ +MF +M+ G+ PD + + L++ LV G+ + G +
Sbjct: 307 ARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 14/248 (5%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNSII H G +A ++ F M +SG PD+ T ++S+C+ + +G H +
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 70 -----DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D N V S + Y+KCG LQ A +F MP ++VV+W II +G
Sbjct: 153 KHGGFDRNTAVGA----SFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGES 208
Query: 125 KEAIEMFEKMRASGL---FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ + KM ++G P+ T ACS+ G ++ GR G G++
Sbjct: 209 EGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN-GLASSKFV 267
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ M + G EA ++L D W +++ + G++E + ++ G
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELG-DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKG 326
Query: 242 RYDSGLYV 249
+ G+ +
Sbjct: 327 MHPDGVVI 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+AV WN +IS + G A+ LF +M S V P T +++LS+C+H G + GKK
Sbjct: 597 KDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALHGS 123
+ ++ ++ + L+++ ++ G L+ A MP + V W ++ + HG
Sbjct: 657 FLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Query: 124 GKEAIEMFEKMRAS 137
+ I M E+ AS
Sbjct: 717 FEMGIRMAERAVAS 730
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 1/169 (0%)
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+K + I ++ ++ + + L++ YA G + +F + ++++ WN II A +
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++ F M SG PD T ++SAC+ +G + GL+ G + A
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
A V + GFL +A + ++P + D V W A++ G E G
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDR-DVVAWTAIISGHVQNGESEGG 211
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 184/322 (57%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + V+WN++IS V+ G A +++ +M S V+PD AT + L C+ + LG
Sbjct: 469 MGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLG 528
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + + N+L+ MY+KCG L+ + +F M +++VV+W +I A ++
Sbjct: 529 KEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMY 588
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G++A+E F M SG+ PD + F ++ ACSHSGLV+ G F M + + I P + H
Sbjct: 589 GEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEH 648
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+VDLL R + +A IQ +P+KPDA +W ++L AC+T G++E +++ ++++EL
Sbjct: 649 YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 708
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D G +L SN Y+ ++WD + IRK + D I K S IE+ + F D +
Sbjct: 709 PDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSA 768
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
S +IY ++ L + GY
Sbjct: 769 PQSEAIYKSLEILYSLMAKEGY 790
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 127/238 (53%), Gaps = 7/238 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+++VS+N++I +++ E++ +F + PD T+ S+L +C H+ DL+L
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLA 326
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K ++Y+ + T+ N L+++YAKCG + TA D+F M K+ VSWN II
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF--GISPDV 179
G EA+++F+ M D IT+ L+S + ++ G+ GL S+ GI D+
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK---GLHSNGIKSGICIDL 443
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ ++D+ + G +G+++ + + D V W ++ AC FG+ G Q+ Q+
Sbjct: 444 SVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFATGLQVTTQM 500
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSWNSIIS ++Q G EAM+LF M + D+ T + ++S + + DL G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + I + +++ N+L++MYAKCG + ++ IF M + V+WN +I A
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +++ +MR S + PD TF L C+ +G+ + FG ++
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQI 546
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++++ + G L + + +++ + D V W ++ A +G E + + + G
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 91/161 (56%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P KN WNSII + G EA+E + ++ S V PD T S++ +C+ + D +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
++ I D + + N+L++MY++ G L A +F MP +++VSWN +I + HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
+EA+E++ +++ S + PD T + +L A + +V+ G+
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 138/278 (49%), Gaps = 10/278 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++ VSWNS+IS + G + EA+E++ + S ++PD+ T+ S+L + ++ + G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII-GALAL 120
+ H + + + V + N L+ MY K A +F M ++ VS+N +I G L L
Sbjct: 227 QGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKL 286
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM-SSTFGISPDV 179
+E++ MF + PD +T + +L AC H + + +Y + M + F + V
Sbjct: 287 EMV-EESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV 344
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ ++D+ + G + A + + K D V W +++ G+L ++ K ++
Sbjct: 345 RN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
+ + L+ + S S R D+ K K ++ +GIK
Sbjct: 402 MEEQADHITYLM--LISVSTRLADL-KFGKGLHSNGIK 436
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 183/315 (58%), Gaps = 1/315 (0%)
Query: 7 AVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
A SWN +IS ++ G +A+E++ +M GV PD T S+L +CS + L GK+ H
Sbjct: 375 AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
I ++ + L ++L++MY+KCG + A IF +P+K+VVSW V+I A HG +E
Sbjct: 435 SISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPRE 494
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
A+ F++M+ GL PD +T +LSAC H+GL++ G +F M S +GI P + HY+CM+
Sbjct: 495 ALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMI 554
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPD-AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
D+LGR G L EA +IQ+ P D A + L AC +G +I + L+E D+
Sbjct: 555 DILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDA 614
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVST 305
Y++L N+Y+ + WD +++R M + G++K S IE+ F +D++H +
Sbjct: 615 STYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAE 674
Query: 306 SIYSMVDQLMDHLKS 320
++Y + L H++S
Sbjct: 675 NVYECLALLSGHMES 689
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 137/291 (47%), Gaps = 36/291 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ SWN++ISC Q G+ +A+ELF RM SG P++ +L +S+CS + L G
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + ++L++MY KC L+ A ++F MP+K++V+WN +I
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G K +E+ +M G P + T T +L ACS S + G++ G + + ++ D+
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV-VNADIYV 346
Query: 182 YACMVDLLGRGGFLGEAMSLIQK----------------------------------LPM 207
++DL + G A ++ K + +
Sbjct: 347 NCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSE 257
KPD V + ++L AC LE GKQI + E D L L +MYS+
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 128/243 (52%), Gaps = 7/243 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ V+WNS+I +V +G +E+ RM + G P TL SIL +CS +L G
Sbjct: 269 MPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV-SWNVIIGALAL 120
K H Y+ + + + + SL+++Y KCG A + F QK+V SWNV+I +
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA-ETVFSKTQKDVAESWNVMISSYIS 387
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G+ +A+E++++M + G+ PD +TFT +L ACS +E G+ L S + D
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGK-QIHLSISESRLETDEL 446
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ ++D+ + G EA + +P K D V W ++ A +G+ ++ L Q E+
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISA---YGSHGQPREALYQFDEM 502
Query: 241 GRY 243
++
Sbjct: 503 QKF 505
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 117/230 (50%), Gaps = 3/230 (1%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLALGKKAHDYI 68
WNS++S + + + +E+F R+ + +PD+ T +++ + +G LG+ H +
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ V + +SL+ MYAK + ++ +F MP+++V SWN +I G ++A+
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKAL 193
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
E+F +M +SG P+ ++ T +SACS +E G+ G D + +VD+
Sbjct: 194 ELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDM 252
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
G+ L A + QK+P K V W +++ G+ + +IL +++
Sbjct: 253 YGKCDCLEVAREVFQKMPRK-SLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 13/204 (6%)
Query: 41 DNATLVSILSSCSH-MGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
+++ L+S+L C++ L K H I + V LC SL+N+Y C +A +
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 100 FFGMP-QKNVVSWNVIIGALALHGSGKEAIEMFEK-MRASGLFPDEITFTGLLSACSHSG 157
F + +V WN ++ + + + +E+F++ + S PD TF ++ A
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYG--- 118
Query: 158 LVEMGRYYFGLMSSTF----GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV 213
+GR + G M T G DV + +V + + ++ + ++P + D
Sbjct: 119 --ALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER-DVAS 175
Query: 214 WGALLGACKTFGNLEMGKQILKQL 237
W ++ G E ++ ++
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRM 199
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ VSW +IS + GQ EA+ F M G+ PD TL+++LS+C H G + G
Sbjct: 471 IPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEG 530
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK--NVVSWNVIIGAL 118
K + I + + ++++ + G L A +I P+ N + + A
Sbjct: 531 LKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSAC 590
Query: 119 ALH 121
LH
Sbjct: 591 CLH 593
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 188/324 (58%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P ++ VS +II+ + Q G EA+E+F R+ G+ P+ T S+L++ S + L G
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHG 273
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+AH ++ + L NSL++MY+KCG L A +F MP++ +SWN ++ + H
Sbjct: 274 KQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKH 333
Query: 122 GSGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRYYF-GLMSSTFGISPDV 179
G G+E +E+F MR + PD +T +LS CSH + + G F G+++ +G P
Sbjct: 334 GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGT 393
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY C+VD+LGR G + EA I+++P KP A V G+LLGAC+ ++++G+ + ++L+E
Sbjct: 394 EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIE 453
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ ++G YV+LSN+Y+ + RW D+ +R +M + K S I+ + + F +D+
Sbjct: 454 IEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDR 513
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
H + + + ++ +K GY
Sbjct: 514 THPRREEVLAKMKEISIKMKQAGY 537
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 131/245 (53%), Gaps = 14/245 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN VSW ++IS + Q G +EA+ +F M S P+ T ++L+SC L LG
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I N + + +SL++MYAK G ++ A +IF +P+++VVS II A
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+EMF ++ + G+ P+ +T+ LL+A S L++ G+ + + ++
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK-----QAHCHVLRRELPF 287
Query: 182 YAC----MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
YA ++D+ + G L A L +P + A+ W A+L G +G+++L +L
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPER-TAISWNAMLVGYSKHG---LGREVL-EL 342
Query: 238 LELGR 242
L R
Sbjct: 343 FRLMR 347
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK 106
++L++C L G++ H ++ + L L+ Y KC L+ A + MP+K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF 166
NVVSW +I + G EA+ +F +M S P+E TF +L++C + + +G+
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 167 GLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP-------------------- 206
GL+ + + + ++D+ + G + EA + + LP
Sbjct: 177 GLIVK-WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 207 --------------MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLS 252
M P+ V + +LL A L+ GKQ +L R + Y +L
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL---RRELPFYAVLQ 292
Query: 253 N----MYSE 257
N MYS+
Sbjct: 293 NSLIDMYSK 301
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 177/287 (61%), Gaps = 5/287 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG---VMPDNATLVSILSSCSHM--G 56
MPV + VSW ++I+ ++G HA+A+ +F M + + P+ AT VS+LSSC++ G
Sbjct: 178 MPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQG 237
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
+ LGK+ H Y+ I ++ TL +L++MY K G L+ A+ IF + K V +WN II
Sbjct: 238 GIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIIS 297
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
ALA +G K+A+EMFE M++S + P+ IT +L+AC+ S LV++G F + S + I
Sbjct: 298 ALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKII 357
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
P HY C+VDL+GR G L +A + IQ LP +PDA V GALLGACK N E+G + KQ
Sbjct: 358 PTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQ 417
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAIS 283
L+ L G YV LS + W + +K+RK M ++GI+K A S
Sbjct: 418 LIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 48/287 (16%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSIL-SSCS---------- 53
K +N++I ++ G++ ++ LF M S V P+N T S++ ++CS
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 54 ------------------------HMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAK 89
+GDL +K D I + V CNSL++ +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDI----LNPCVVACNSLLDACGR 164
Query: 90 CGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI----EMFEKMRASGLFPDEIT 145
G + A + F MP +VVSW +I + G +A+ EM + RA + P+E T
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAV-ITPNEAT 223
Query: 146 FTGLLSACSH--SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ 203
F +LS+C++ G + +G+ G + S I ++D+ G+ G L A+++
Sbjct: 224 FVSVLSSCANFDQGGIRLGKQIHGYVMSK-EIILTTTLGTALLDMYGKAGDLEMALTIFD 282
Query: 204 KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL 250
++ K W A++ A + G + ++ + + + +G+ +L
Sbjct: 283 QIRDK-KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLL 328
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 189/321 (58%), Gaps = 3/321 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P KN +SW SII+ + EA+ +F R + P+ TL + L++C+ +G L G
Sbjct: 459 IPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCG 517
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H ++ + + L N+L++MY +CG + TA F +K+V SWN+++ +
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSER 576
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G +E+F++M S + PDEITF LL CS S +V G YF M +G++P++ H
Sbjct: 577 GQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKH 635
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC+VDLLGR G L EA IQK+P+ PD VWGALL AC+ +++G+ + + EL
Sbjct: 636 YACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELD 695
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ G Y+LL N+Y++ +W ++ K+R++M ++G+ S +E+ G + F+ DDK H
Sbjct: 696 KKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYH 755
Query: 302 EVSTSIYSMVDQLMDHLKSVG 322
+ I ++++ + + VG
Sbjct: 756 PQTKEINTVLEGFYEKMSEVG 776
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 157/333 (47%), Gaps = 40/333 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
M +N SWN ++ + ++G EAM L+ RM V GV PD T +L +C + DLA
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H ++ + + + N+L+ MY KCG +++A +F MP+++++SWN +I
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G E +E+F MR + PD +T T ++SAC G +GR + +T G + D++
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-GFAVDIS 333
Query: 181 HYACMVDLLGRGGFLGEAMSLIQK--------------------LP-------------- 206
+ + G EA L + LP
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL--LSNMYSESQRWDDM 264
+KPD + A+L AC T G+L+ G ++ K ++ R S + V L NMYS+ + D
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIK-ARLISYVIVANNLINMYSKCKCIDKA 452
Query: 265 KKI-RKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
I I + I I+ + ++ C++ ++
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 4/238 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSW ++IS + +A++ + M V PD T+ ++LS+C+ +GDL G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + V + N+L+NMY+KC + A+DIF +P+KNV+SW II L L+
Sbjct: 418 VELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLN 477
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA+ +M+ + L P+ IT T L+AC+ G + G+ + T G+ D
Sbjct: 478 NRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRT-GVGLDDFL 535
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ R G + A S Q K D W LL G M ++ ++++
Sbjct: 536 PNALLDMYVRCGRMNTAWS--QFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 129/333 (38%), Gaps = 54/333 (16%)
Query: 21 GQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLC 80
G+ EAM+L M V D V+++ C G K + + ++ V L
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM-RASGL 139
N+ + M+ + G L A +F M ++N+ SWNV++G A G EA+ ++ +M G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 140 FPDEITFTGLLSACS-----------HSGLVEMG------------------------RY 164
PD TF +L C H +V G R
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGAC 221
F M D+ + M+ G E + L ++ L + PD + +++ AC
Sbjct: 253 LFDRMPRR-----DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 222 KTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCR 280
+ G+ +G+ I ++ G D + L+ MY + W + +K+ M I
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 281 AISSIEIDGCCYQFMVDDKNHEVSTSIYSMVDQ 313
+ I G Y F+ D + Y M+DQ
Sbjct: 368 TM----ISGYEYNFLPDK-----AIDTYRMMDQ 391
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 184/321 (57%), Gaps = 2/321 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
+P K+ VSW ++IS G ++E F M + + PD +V +L SCS +G L
Sbjct: 325 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 384
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K H Y+ + + SL+ +Y++CG+L A +F G+ K+ V W +I +
Sbjct: 385 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGI 444
Query: 121 HGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG G +A+E F M ++S + P+E+TF +LSACSH+GL+ G F LM + + ++P++
Sbjct: 445 HGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNL 504
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYA +VDLLGR G L A+ + +++P P + G LLGAC+ N EM + + K+L E
Sbjct: 505 EHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFE 564
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L +G Y+L+SN+Y W++++K+R + GIKK A S IEI ++F+ DD+
Sbjct: 565 LESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDE 624
Query: 300 NHEVSTSIYSMVDQLMDHLKS 320
H +Y ++ +L H+K
Sbjct: 625 LHPEKEPVYGLLKELDLHMKE 645
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 120/220 (54%), Gaps = 5/220 (2%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M+ K+ +SW+++I+C+VQ G AEA+ +F M G P+ AT++ +L +C+ DL
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+K H+ + V + +L++MY KC + + A +F +P+K+VVSW +I L
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 121 HGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPD 178
+G +IE F M + PD I +L +CS G +E + ++ ++ F +P
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF 402
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ A +V+L R G LG A + + +K D VVW +L+
Sbjct: 403 IG--ASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLI 439
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
V+W+S++S + G +A+E F RM + S V PD TL++++S+C+ + + LG+ H
Sbjct: 128 VTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHG 187
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
++ + ++L NSL+N YAK A + A+++F + +K+V+SW+ +I +G+ E
Sbjct: 188 FVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
A+ +F M G P+ T +L AC+ + +E GR L G+ +V +V
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALV 306
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
D+ + EA ++ ++P K D V W AL+
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRK-DVVSWVALI 337
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ WN+++ +E Q E + F M PDN TL L +C + ++ G
Sbjct: 20 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 79
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H ++ D + + + +SL+ MY KCG + A+ +F + + ++V+W+ ++
Sbjct: 80 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 139
Query: 121 HGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+GS +A+E F +M AS + PD +T L+SAC+ +GR G + G S D+
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR-GFSNDL 198
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+ +++ + EA++L + + K D + W ++ AC
Sbjct: 199 SLVNSLLNCYAKSRAFKEAVNLFKMIAEK-DVISWSTVI-AC 238
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 185/324 (57%), Gaps = 2/324 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KNAVSW S+++ +VQ + +A L+ R V + + S+LS+C+ M L LG
Sbjct: 270 MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 329
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + ++ + ++L++MY KCG ++ + F MP+KN+V+ N +IG A
Sbjct: 330 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 389
Query: 122 GSGKEAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G A+ +FE+M R G P+ +TF LLSACS +G VE G F M ST+GI P
Sbjct: 390 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 449
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+C+VD+LGR G + A I+K+P++P VWGAL AC+ G ++G + L +
Sbjct: 450 EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
L DSG +VLLSN ++ + RW + +R+ + GIKK S I + + F D+
Sbjct: 510 LDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDR 569
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+H ++ I + + +L + +++ GY
Sbjct: 570 SHILNKEIQTTLAKLRNEMEAAGY 593
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 137/296 (46%), Gaps = 7/296 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P +N +WN+ IS V +G+ EA+E F P++ T + L++CS L LG
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + V++CN L++ Y KC ++++ IF M KN VSW ++ A +
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++A ++ + R + + + +LSAC+ +E+GR + + +
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA-HAVKACVERTIFV 347
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ +VD+ G+ G + ++ ++P K + V +L+G G ++M + +++ G
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+ Y+ ++ S R ++ KI + R+ IE Y +VD
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDS-----MRSTYGIEPGAEHYSCIVD 457
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 2/220 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+ P +N VSW S+IS Q G + A+ F M GV+P++ T + + +
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H + V + S +MY K A +F +P++N+ +WN I
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +EAIE F + R P+ ITF L+ACS + +G GL+ + G DV+
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS-GFDTDVS 245
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++D G+ + + + ++ K +AV W +L+ A
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAA 284
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 79 LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG 138
L N L+NMY+K ++A + P +NVVSW +I LA +G A+ F +MR G
Sbjct: 44 LANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG 103
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEA 198
+ P++ TF A + L G+ L G DV D+ + +A
Sbjct: 104 VVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKC-GRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 199 MSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
L ++P + + W A + T G ++ ++ +E R D
Sbjct: 163 RKLFDEIPER-NLETWNAFISNSVTDGR---PREAIEAFIEFRRID 204
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 169/288 (58%), Gaps = 2/288 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M K+ V+WNSIIS Q G EA+ LF RM V P+ T+ S+ S+C+ +G LA+
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 61 GKKAHDYICDNNI--TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
G H Y + SV + +L++ YAKCG Q+A IF + +KN ++W+ +IG
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G ++E+FE+M P+E TFT +LSAC H+G+V G+ YF M + +P
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY CMVD+L R G L +A+ +I+K+P++PD +GA L C ++G+ ++K++L
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+L D+ YVL+SN+Y+ RW+ K++R +M G+ K S++E
Sbjct: 642 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 144/316 (45%), Gaps = 34/316 (10%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + W ++ C+ + E ++L+ + G D+ L +C+ + DL G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
KK H + +V L L++MYAKCG +++A +F + +NVV W +I +
Sbjct: 162 KKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISP--- 177
+E + +F +MR + + +E T+ L+ AC+ + G+++ G L+ S +S
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 178 --------------------------DVAHYACMVDLLGRGGFLGEAMSLIQKLP---MK 208
D+ + M+ G + EA+SL QK+ +K
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIR 268
P+ V ++L C NLE+G+ + +++G +D+ + L +MY++ + D K +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVF 400
Query: 269 KIMNDSGIKKCRAISS 284
++ ++ I +I S
Sbjct: 401 EMESEKDIVAWNSIIS 416
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 34/273 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ ++N V W S+I+ +V+ E + LF RM + V+ + T +++ +C+ + L G
Sbjct: 202 ITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG 261
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + I +S L SL++MY KCG + A +F ++V W +I +
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI------ 175
GS EA+ +F+KM+ + P+ +T +LS C +E+GR GL S GI
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL-SIKVGIWDTNVA 380
Query: 176 ------------------------SPDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMK 208
D+ + ++ + G + EA+ L ++ +
Sbjct: 381 NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT 440
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
P+ V +L AC + G+L +G + ++LG
Sbjct: 441 PNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 17/239 (7%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V W ++I + G EA+ LF +M + P+ T+ S+LS C + +L LG+ H
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368
Query: 68 -----ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
I D N+ N+L++MYAKC + A +F +K++V+WN II + +G
Sbjct: 369 SIKVGIWDTNVA------NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNG 422
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDVAH 181
S EA+ +F +M + + P+ +T L SAC+ G + +G + F S V
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC----KTFGNLEMGKQILKQ 236
++D + G A + + K + + W A++G T G+LE+ +++LK+
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 181/315 (57%), Gaps = 3/315 (0%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
W +++S + +H +A+ +F M + ++P+ +T S L+SCS +G L GK+ H
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
+ + NSL+ MY+ G + A+ +F + +K++VSWN II A HG GK A
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFV 413
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG-ISPDVAHYACMVDL 188
+F +M PDEITFTGLLSACSH G +E GR F MSS I + HY CMVD+
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLY 248
LGR G L EA LI+++ +KP+ +VW ALL AC+ +++ G++ + L S Y
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 249 VLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIY 308
VLLSN+Y+ + RW ++ K+R M +GI K S + I G ++F D+ H + IY
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIY 591
Query: 309 SMVDQLMDHLKSVGY 323
++ L + LK +GY
Sbjct: 592 EKLEFLREKLKELGY 606
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 109/241 (45%), Gaps = 2/241 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SW ++I Q + EA++LF M + + ++++C++ +G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I + SL+ YA C + + +F + V W ++ +L+
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++A+ +F M + + P++ TF L++CS G ++ G+ G+ + G+ D
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV-AVKLGLETDAFV 363
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+V + G + +A+S+ K+ K V W +++ C G + I Q++ L
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 242 R 242
+
Sbjct: 423 K 423
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 10/217 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++ VSWNS+IS V+ G A++LF M V+ + ++++ C G +
Sbjct: 92 MPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV----SWTAMVNGCFRSGKVDQA 147
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ + + NS+++ Y + G + A+ +F MP KNV+SW +I L +
Sbjct: 148 ERLFYQMPVKDTAA----WNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQN 203
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA+++F+ M + FT +++AC+++ MG GL+ G +
Sbjct: 204 ERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK-LGFLYEEYV 262
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
A ++ +G++ + + + VW ALL
Sbjct: 263 SASLITFYANCKRIGDSRKVFDE-KVHEQVAVWTALL 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 100/263 (38%), Gaps = 56/263 (21%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSWNSII Q G+ A +F +M PD T +LS+CSH G L G+K
Sbjct: 390 KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL 449
Query: 65 HDYICD--NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
Y+ N+I + ++++ +CG L
Sbjct: 450 FYYMSSGINHIDRKIQHYTCMVDILGRCGKL----------------------------- 480
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI-SPDVAH 181
KEA E+ E+M P+E+ + LLSAC V+ G ++ F + S A
Sbjct: 481 --KEAEELIERMVVK---PNEMVWLALLSACRMHSDVDRGE---KAAAAIFNLDSKSSAA 532
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP----MKPDAVVWGALLGA------------CKTFG 225
Y + ++ G L K+ MK W + G + +
Sbjct: 533 YVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSRIYE 592
Query: 226 NLEMGKQILKQLLELGRYDSGLY 248
LE ++ LK+L Y S L+
Sbjct: 593 KLEFLREKLKELGYAPDYRSALH 615
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 77 VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA 136
V+L ++ Y + L A+++F MP ++VVSWN +I G A+++F++M
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 137 SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLG 196
+ +++T +++ C SG V+ F M D A + MV + G +
Sbjct: 126 RSV----VSWTAMVNGCFRSGKVDQAERLFYQMP-----VKDTAAWNSMVHGYLQFGKVD 176
Query: 197 EAMSLIQKLPMKPDAVVWGALL 218
+A+ L +++P K + + W ++
Sbjct: 177 DALKLFKQMPGK-NVISWTTMI 197
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 169/282 (59%), Gaps = 4/282 (1%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
W++II+ VQ ++A+ LF RM V P+ ATL S+L + + + DL H Y+
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALHGSGK 125
S+ L+++Y+KCG L++A IF G+ +K +VV W +I +HG G
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
A+++F +M SG+ P+EITFT L+ACSHSGLVE G F M + HY C+
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI 567
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLLGR G L EA +LI +P +P + VWGALL AC T N+++G+ +L EL ++
Sbjct: 568 VDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENT 627
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
G YVLL+N+Y+ RW DM+K+R +M + G++K S+IEI
Sbjct: 628 GNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 91/163 (55%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M ++ +SWN++IS + + G +A+ +F M V D+AT+VS+L C H+ DL +
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H + + + + + N+L+NMY KCG + A +F M +++V++W +I
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
G + A+E+ M+ G+ P+ +T L+S C + V G+
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 6/230 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV--MPDNATLVSILSSCSHMGDLA 59
MP + +S+N +I +V+EG + +A+ +F RM GV +PD T + + + +
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
LG H I + + N+L+ MY G ++ A D+F M ++V+SWN +I
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS-TFGISPD 178
+G +A+ MF+ M + D T +L C H +EMGR L+ G +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
V + +V++ + G + EA + ++ + D + W ++ G++E
Sbjct: 255 VKN--ALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDGDVE 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 6/244 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ ++W +I+ + ++G A+EL M GV P+ T+ S++S C + G
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + + + SL++MYAKC + +F G + + W+ II +
Sbjct: 339 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN 398
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSA-CSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+A+ +F++MR + P+ T LL A + + L + + L + F S D A
Sbjct: 399 ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA 458
Query: 181 HYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+V + + G L A + IQ+ D V+WGAL+ G+ Q+ ++
Sbjct: 459 --TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
Query: 238 LELG 241
+ G
Sbjct: 517 VRSG 520
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V W ++IS + G A+++F M SGV P+ T S L++CSH G + G
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 65 HDYICDNNITVSVTLCNS-LMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALHG 122
++ ++ T++ + + ++++ + G L A ++ +P + W ++ A H
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH- 606
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTG 148
E +++ E M A+ LF E TG
Sbjct: 607 ---ENVQLGE-MAANKLFELEPENTG 628
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 185/322 (57%), Gaps = 4/322 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEG-QHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLA 59
MP ++ VSWNS++ + ++G ELF M V V PD T+VS++S ++ G+L+
Sbjct: 326 MPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS 385
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G+ H + + L ++L++MY KCG ++ A +F +K+V W +I LA
Sbjct: 386 HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG+G++A+++F +M+ G+ P+ +T +L+ACSHSGLVE G + F M FG P+
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET 505
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQ-KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY +VDLL R G + EA ++Q K+PM+P +WG++L AC+ ++E + L +LL
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELL 565
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISS-IEIDGCCYQFMVD 297
+L G YVLLSN+Y+ RW K R+ M + G+KK SS + ++G +
Sbjct: 566 KLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAE 625
Query: 298 DKNHEVSTSIYSMVDQLMDHLK 319
+NH T I ++ L + +K
Sbjct: 626 KQNHPRWTEIKRILQHLYNEMK 647
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 129/275 (46%), Gaps = 37/275 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + S+N +I + ++G EA++L+ +M G+ PD T++S+L C H+ D+ LG
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Query: 62 KKAHDYICDNNITVS--VTLCNSLMNMYAKC----------------------------- 90
K H +I S + L N+L++MY KC
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
Query: 91 --GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI-EMFEKMR-ASGLFPDEITF 146
G ++ A +F MP++++VSWN ++ + G + + E+F +M + PD +T
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
L+S +++G + GR+ GL+ + D + ++D+ + G + A ++ K
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIR-LQLKGDAFLSSALIDMYCKCGIIERAF-MVFKTA 429
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ D +W +++ GN + Q+ ++ E G
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG 464
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P N +N++IS E L+ M V PD T + ++ + S + ++ K
Sbjct: 96 PNPNVFVYNTMISA--VSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---K 150
Query: 63 KAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H +I + +++ L NSL+ Y + G A +F MP +V S+NV+I A
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI-SPDVA 180
G EA++++ KM + G+ PDE T LL C H + +G+ G + + S ++
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 181 HYACMVDLLGR---GGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++D+ + G A ++K M+ W ++ G++E + + Q+
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRS----WNTMVVGFVRLGDMEAAQAVFDQM 326
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 163/273 (59%), Gaps = 5/273 (1%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+W+++I + Q GQ EA ++F MC V PD +V ++S+CS MG L +K Y+
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 69 CDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
N S + +L++M AKCG + A +F MPQ+++VS+ ++ +A+HG G EA
Sbjct: 331 HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI--SPDVAHYACM 185
I +FEKM G+ PDE+ FT +L C S LVE G YF LM + I SPD HY+C+
Sbjct: 391 IRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPD--HYSCI 448
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
V+LL R G L EA LI+ +P + A WG+LLG C GN E+ + + + L EL +
Sbjct: 449 VNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSA 508
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
G YVLLSN+Y+ RW D+ +R MN++GI K
Sbjct: 509 GSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +NAVSW +++ +V+ G+ EA +F M + NA + ++ S GDL
Sbjct: 171 MPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS----GDLVNA 226
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
KK D + +I +S T S+++ YAK G + +A D+F +V +W+ +I A +
Sbjct: 227 KKLFDEMPKRDI-ISYT---SMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG---LVEMGRYYFGLMSSTFGISPD 178
G EA ++F +M A + PDE GL+SACS G L E Y + F
Sbjct: 283 GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS---- 338
Query: 179 VAHYA--CMVDLLGRGGFLGEAMSLIQKLPMK 208
+HY ++D+ + G + A L +++P +
Sbjct: 339 -SHYVVPALIDMNAKCGHMDRAAKLFEEMPQR 369
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 11/218 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLAL 60
+P WN +I + + E + + RM +G+ PD T ++ CS+ G + +
Sbjct: 69 VPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRV 128
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G H + V + S ++ Y KC L +A +F MP++N VSW ++ A
Sbjct: 129 GSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVK 188
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +EA MF+ M L ++ L+ SG + + F M D+
Sbjct: 189 SGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKR-----DII 239
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
Y M+D +GG + A L ++ D W AL+
Sbjct: 240 SYTSMIDGYAKGGDMVSARDLFEE-ARGVDVRAWSALI 276
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 176/317 (55%), Gaps = 2/317 (0%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+WNSIIS + Q + EA L M V+G P++ TL SIL C+ + +L GK+ H YI
Sbjct: 348 TWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI 407
Query: 69 CDNNITVSVT-LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
T L NSL+++YAK G + A + M +++ V++ +I G G A
Sbjct: 408 LRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVA 467
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+ +F++M SG+ PD +T +LSACSHS LV G F M +GI P + H++CMVD
Sbjct: 468 LALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVD 527
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
L GR GFL +A +I +P KP W LL AC GN ++GK ++LLE+ + G
Sbjct: 528 LYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGY 587
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSI 307
YVL++NMY+ + W + ++R IM D G+KK + I+ D F V D + + +
Sbjct: 588 YVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNT 647
Query: 308 YSMVDQLMDHLK-SVGY 323
Y ++D L +K + GY
Sbjct: 648 YPLLDGLNQLMKDNAGY 664
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ + + WN +I+ + + E + + RM G+ PD T S+L +C D+A G+
Sbjct: 106 ILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H I ++ S+ +CN+L++MY + + A +F M +++ VSWN +I A G
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EA E+F+KM SG+ IT+ + C +G +Y
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG-----------------------NYV 262
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
+ L+ R ++ P D V L AC G + +GK+I
Sbjct: 263 GALGLISR----------MRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 126/302 (41%), Gaps = 69/302 (22%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-------------------------- 38
++AVSWN++I+C+ EG +EA ELF +M SGV
Sbjct: 208 RDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGL 267
Query: 39 ------MP---DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAK 89
P D ++ L +CS +G + LGK+ H ++ + N+L+ MY+K
Sbjct: 268 ISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSK 327
Query: 90 CGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGL 149
C L+ A+ +F + ++ +WN II A +EA + +M +G P+ IT +
Sbjct: 328 CKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASI 387
Query: 150 LSACSHSGLVEMGRY-------------YFGLMSSTFGI------------------SPD 178
L C+ ++ G+ Y L +S + D
Sbjct: 388 LPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRD 447
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILK 235
Y ++D G G G A++L +++ +KPD V A+L AC + G+++
Sbjct: 448 EVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFM 507
Query: 236 QL 237
++
Sbjct: 508 KM 509
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M ++ V++ S+I + +G+ A+ LF M SG+ PD+ T+V++LS+CSH +
Sbjct: 442 LMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHE 501
Query: 61 GKKAHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGAL 118
G++ + C+ I + + ++++Y + G L A DI MP K + +W ++ A
Sbjct: 502 GERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNAC 561
Query: 119 ALHGS---GKEAIEMFEKMR 135
+HG+ GK A E +M+
Sbjct: 562 HIHGNTQIGKWAAEKLLEMK 581
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 21 GQHAEAMELFC--RMCVSGVMPDNATL---VSILSSCSHMGDLALGKKAHDYICDNNITV 75
G +A + F R+ S + D+ L S+LS+C + G + H + + +
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 76 SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR 135
L L+ Y+ A I + + WNV+I + A + +E I +++M
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 136 ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC--MVDLLGRGG 193
+ G+ PD T+ +L AC + V GR G + + S + Y C ++ + R
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVS---SYKSSLYVCNALISMYKRFR 193
Query: 194 FLGEAMSLIQKLPMKPDAVVWGALL 218
+G A L ++ + DAV W A++
Sbjct: 194 NMGIARRLFDRM-FERDAVSWNAVI 217
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 176/319 (55%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VS+N+ + + +A +L + + T S+LS +++G + G++
Sbjct: 437 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + ++ + +CN+L++MY+KCG++ TA +F M +NV+SW +I A HG
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFA 556
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+E F +M G+ P+E+T+ +LSACSH GLV G +F M I P + HYAC
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLL R G L +A I +P + D +VW LGAC+ N E+GK +++LEL +
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
Y+ LSN+Y+ + +W++ ++R+ M + + K S IE+ ++F V D H +
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY +D+L+ +K GY
Sbjct: 737 HQIYDELDRLITEIKRCGY 755
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 50/338 (14%)
Query: 2 MPVKNAVSWNSIISC-------HVQEGQHAEAMELFCRMCVSGVMP-DNATLVSILSSCS 53
+P+K+ S ++ I+ H+ G A+ M G+ P D+ T S+L SC
Sbjct: 14 LPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCI 73
Query: 54 HMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ---KNVVS 110
D LGK H + + +I L NSL+++Y+K G A D+F M + ++VVS
Sbjct: 74 RARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVS 133
Query: 111 WNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS 170
W+ ++ +G +AI++F + GL P++ +T ++ ACS+S V +GR G +
Sbjct: 134 WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193
Query: 171 STFGISPDVAHYACMVDLLGRG--------------------------------GFLGEA 198
T DV ++D+ +G GF EA
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREA 253
Query: 199 MSLIQKLPM---KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMY 255
+ + + + D ++ AC NL +GKQ+ + G D + L +MY
Sbjct: 254 IRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD-VECSLVDMY 312
Query: 256 ---SESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGC 290
S DD +K+ M D + A+ + + C
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 11/240 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V+W +I+ +Q G EA+ F M +SG D TL S+ S+C+ + +L+LGK+ H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 66 DYICDNNITVSVTLCNSLMNMYAKC---GALQTAMDIFFGMPQKNVVSWNVII-GALALH 121
+ + + V SL++MYAKC G++ +F M +V+SW +I G +
Sbjct: 293 SWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350
Query: 122 GSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
EAI +F +M G + P+ TF+ AC + +G+ G + G++ + +
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG-QAFKRGLASNSS 409
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL-GACKTFGNLEMGKQILKQLLE 239
++ + + + +A + L K + V + L G C+ N E ++L ++ E
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNL-NFEQAFKLLSEITE 467
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 114/273 (41%), Gaps = 35/273 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHA-EAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLA 59
M + +SW ++I+ +++ A EA+ LF M G V P++ T S +C ++ D
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+GK+ + + ++ NS+++M+ K ++ A F + +KN+VS+N +
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY------FGL----- 168
+ + ++A ++ ++ L TF LLS ++ G + G GL
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 169 -----------------MSSTFGI--SPDVAHYACMVDLLGRGGFLGEAMSLIQKL---P 206
S F + +V + M+ + GF + ++
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+KP+ V + A+L AC G + G + + E
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M +N +SW S+I+ + G +E F +M GV P+ T V+ILS+CSH+G ++
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 61 GKKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGAL 118
G + + + D+ I + ++++ + G L A + MP Q +V+ W +GA
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Query: 119 ALHGS 123
+H +
Sbjct: 654 RVHSN 658
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 187/323 (57%), Gaps = 1/323 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ SW S+I CHVQ Q A +LF ++ S + P+ T+ ++S+C+ L+ G++
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
Y + I ++ S ++MYAK G + A +F + +V +++ +I +LA HGS
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+ +FE M+ G+ P++ F G+L AC H GLV G YF M + + I+P+ H+ C
Sbjct: 542 NEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTC 601
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR G L +A +LI + V W ALL +C+ + + +GK++ ++L+EL
Sbjct: 602 LVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEA 661
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
SG YVLL N+Y++S +++R++M D G+KK A+S I I + F V D +H S
Sbjct: 662 SGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSS 721
Query: 305 TSIYSMVDQLMDHLKSVGYPCKH 327
IY+M++ MD++ V Y H
Sbjct: 722 QMIYTMLET-MDNVDFVDYTLVH 743
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 5/220 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N +S+NS+IS + Q G + +AMELF + + D T L C DL LG
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + N ++ V L N L++MY+KCG L AM +F +++ VSWN +I
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACS---HSGLVEMGRYYFGLMSSTFGISPD 178
G+ +E + + KM GL +L AC + G +E G ++ G+ D
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG-MAIHCYTAKLGMEFD 286
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ ++D+ + G L EA+ L +P K + V + A++
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMI 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 7/211 (3%)
Query: 32 RMCVSGVMPDNATLVS-----ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNM 86
R S P N L S + + + G + LGK AH ++ +++ + L N+L+NM
Sbjct: 32 RFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNM 91
Query: 87 YAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
Y KC L A +F MP++N++S+N +I G ++A+E+F + R + L D+ T+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
G L C +++G GL+ G+S V ++D+ + G L +AMSL +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVN-GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ D V W +L+ G E +L ++
Sbjct: 211 ER-DQVSWNSLISGYVRVGAAEEPLNLLAKM 240
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 180/316 (56%), Gaps = 1/316 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SWNSII+ Q+G +A++ F + S + D+ ++L SCS + L LG++
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN-VVSWNVIIGALALHGS 123
H + + + +SL+ MY+KCG +++A F + K+ V+WN +I A HG
Sbjct: 431 HALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGL 490
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G+ ++++F +M + D +TFT +L+ACSH+GL++ G LM + I P + HYA
Sbjct: 491 GQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYA 550
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
VDLLGR G + +A LI+ +P+ PD +V LG C+ G +EM Q+ LLE+
Sbjct: 551 AAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPE 610
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
D YV LS+MYS+ ++W++ ++K+M + G+KK S IEI F +D+++ +
Sbjct: 611 DHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPL 670
Query: 304 STSIYSMVDQLMDHLK 319
IY M+ L ++
Sbjct: 671 CQDIYMMIKDLTQEMQ 686
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 3/216 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SWNS+I+ + A ELF +M V D T +LS+CS GK
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 65 HDYICDNNITVSVTLCNSLMNMYAK--CGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H + + + N+L++MY + G ++ A+ +F + K+++SWN II A G
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
++A++ F +R+S + D+ F+ LL +CS +++G+ L + + +S +
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFV-I 446
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ ++ + + G + A Q++ K V W A++
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 5/243 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +++VSWN++IS + G+ +A LF M SG D + +L + + LG
Sbjct: 61 MPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG 120
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + +V + +SL++MYAKC ++ A + F + + N VSWN +I
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 180
Query: 122 GSGKEAIEMFEKMR-ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
K A + M + + D TF LL+ + + + G+ ++
Sbjct: 181 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLK-LGLQHEIT 239
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
M+ G + +A + L D + W +++ F E+ + + +++
Sbjct: 240 ICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG---FSKHELKESAFELFIQM 296
Query: 241 GRY 243
R+
Sbjct: 297 QRH 299
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 77 VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA 136
+ + N +++ Y K G L A +F MP+++ VSWN +I G ++A +F M+
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 137 SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLG 196
SG D +F+ LL + ++G GL+ G +V + +VD+ + +
Sbjct: 95 SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGSSLVDMYAKCERVE 153
Query: 197 EAMSLIQKLPMKPDAVVWGALLG 219
+A +++ +P++V W AL+
Sbjct: 154 DAFEAFKEIS-EPNSVSWNALIA 175
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 173/289 (59%), Gaps = 5/289 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
MP + VSW +II + + + EA+ LF RM + P+ T+++IL + ++GDL +
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 61 GKKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGA 117
H Y+ + + + NSL++ YAKCG +Q+A F +P +KN+VSW +I A
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY-YFGLMSSTFGIS 176
A+HG GKEA+ MF+ M GL P+ +T +L+ACSH GL E +F M + + I+
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
PDV HY C+VD+L R G L EA + ++P++ AVVW LLGAC + + E+ +++ ++
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
L+EL R G YVL+SN++ + R+ D ++ RK M+ G+ K S +
Sbjct: 455 LMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 9/189 (4%)
Query: 56 GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
G++ K D + + N + L N+ G + A+ MP + VVSW II
Sbjct: 172 GNMIDAHKVFDEMPERNPVTWNVMITGLTNL----GDFEKALCFLEKMPNRTVVSWTTII 227
Query: 116 GALALHGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
A KEAI +F +M A + P+EIT +L A + G ++M +
Sbjct: 228 DGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGF 287
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM-KPDAVVWGALLGACKTFGNLEMGKQI 233
+ D+ ++D + G + A ++P + + V W ++ A G MGK+
Sbjct: 288 VPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHG---MGKEA 344
Query: 234 LKQLLELGR 242
+ ++ R
Sbjct: 345 VSMFKDMER 353
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 175/286 (61%), Gaps = 2/286 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWNS+IS + G+ EA+ELFC M G PD AT+V++L + +G L G
Sbjct: 194 MSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG 253
Query: 62 KKAHDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K H + + +T+ N+L++ Y K G L+ A IF M ++NVVSWN +I A+
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAV 313
Query: 121 HGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+G G+ I++F+ M G + P+E TF G+L+ CS++G VE G FGLM F +
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEART 373
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY MVDL+ R G + EA ++ +P+ +A +WG+LL AC++ G++++ + +L++
Sbjct: 374 EHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
+ +SG YVLLSN+Y+E RW D++K+R +M + ++K S+I
Sbjct: 434 IEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 32/268 (11%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N + +N++I C+ G E++ F M G+ D T +L SCS + DL GK H
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125
Query: 66 -------------------------------DYICDNNITVSVTLCNSLMNMYAKCGALQ 94
+ D +V + N ++ + G ++
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
+ +F M ++++VSWN +I +L+ G +EA+E+F +M G PDE T +L +
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISA 245
Query: 155 HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
G+++ G++ S+ + +VD + G L A ++ +K+ + + V W
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM-QRRNVVSW 304
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGR 242
L+ G E G + ++E G+
Sbjct: 305 NTLISGSAVNGKGEFGIDLFDAMIEEGK 332
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 179/319 (56%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N ++WN++++ + G E ++L +M GV D + LS+ + + L G++
Sbjct: 511 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 570
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + N+ +MY+KCG + + + +++ SWN++I AL HG
Sbjct: 571 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 630
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+E F +M G+ P +TF LL+ACSH GLV+ G Y+ +++ FG+ P + H C
Sbjct: 631 EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 690
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
++DLLGR G L EA + I K+PMKP+ +VW +LL +CK GNL+ G++ + L +L D
Sbjct: 691 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 750
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+YVL SNM++ + RW+D++ +RK M IKK +A S +++ F + D+ H +
Sbjct: 751 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 810
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY+ ++ + +K GY
Sbjct: 811 MEIYAKLEDIKKLIKESGY 829
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL-AL 60
MP ++ V+WN++I + ++ +A+ F M V GV + T+VS+LS+C GDL
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 465
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H YI + NSL+ MYAKCG L ++ D+F G+ +N+++WN ++ A A
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 525
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G+E +++ KMR+ G+ D+ +F+ LSA + ++E G+ GL + G D
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL-AVKLGFEHDSF 584
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV--WGALLGACKTFGNLEMGKQILKQLL 238
+ D+ + G +GE +++ LP + + W L+ A G E ++L
Sbjct: 585 IFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 239 ELG 241
E+G
Sbjct: 642 EMG 644
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ +SWNS+++ V +G+ +A+ L C M SG + T S L++C G
Sbjct: 305 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 364
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + + + N+L++MY K G + + + MP+++VV+WN +IG A
Sbjct: 365 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSSTFGISPDVA 180
+A+ F+ MR G+ + IT +LSAC G L+E G+ + S G D
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEH 483
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
++ + + G L + L L + + + W A+L A G+ G+++LK
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGH---GEEVLK 534
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL-AL 60
MPV+N VSWN+++S V+ G + E ME F +MC G+ P + + S++++C G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H ++ + + V + +++++Y G + + +F MP +NVVSW ++ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +E I++++ MR G+ +E + + ++S+C +GR G + + G+ +A
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLA 179
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
++ +LG G + A + ++ + D + W ++ A G++E +I
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIEESFRIF 232
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +SWNSI + + Q G E+ +F M ++ T+ ++LS H+ G
Sbjct: 204 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 263
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + V +CN+L+ MYA G A +F MP K+++SWN ++ +
Sbjct: 264 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 323
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+ + M +SG + +TFT L+AC E GR GL+ + G+ +
Sbjct: 324 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQII 382
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+V + G+ G + E+ ++ ++P + D V W AL+G
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGG 420
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 8/222 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW S++ + +G+ E ++++ M GV + ++ ++SSC + D +LG
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 162
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ + + + + + NSL++M G + A IF M +++ +SWN I A A +
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 122 GSGKEAIEMFEKMRASGLFPDEI---TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G +E+ +F MR F DE+ T + LLS H + GR GL+ G
Sbjct: 223 GHIEESFRIFSLMRR---FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGFDSV 278
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
V ++ + G EA + +++P K D + W +L+ +
Sbjct: 279 VCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 179/319 (56%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N ++WN++++ + G E ++L +M GV D + LS+ + + L G++
Sbjct: 528 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + N+ +MY+KCG + + + +++ SWN++I AL HG
Sbjct: 588 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 647
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+E F +M G+ P +TF LL+ACSH GLV+ G Y+ +++ FG+ P + H C
Sbjct: 648 EEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCIC 707
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
++DLLGR G L EA + I K+PMKP+ +VW +LL +CK GNL+ G++ + L +L D
Sbjct: 708 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 767
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+YVL SNM++ + RW+D++ +RK M IKK +A S +++ F + D+ H +
Sbjct: 768 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 827
Query: 305 TSIYSMVDQLMDHLKSVGY 323
IY+ ++ + +K GY
Sbjct: 828 MEIYAKLEDIKKLIKESGY 846
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL-AL 60
MP ++ V+WN++I + ++ +A+ F M V GV + T+VS+LS+C GDL
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H YI + NSL+ MYAKCG L ++ D+F G+ +N+++WN ++ A A
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G+E +++ KMR+ G+ D+ +F+ LSA + ++E G+ GL + G D
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL-AVKLGFEHDSF 601
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVV--WGALLGACKTFGNLEMGKQILKQLL 238
+ D+ + G +GE +++ LP + + W L+ A G E ++L
Sbjct: 602 IFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 239 ELG 241
E+G
Sbjct: 659 EMG 661
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 6/235 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ +SWNS+++ V +G+ +A+ L C M SG + T S L++C G
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + + + N+L++MY K G + + + MP+++VV+WN +IG A
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSSTFGISPDVA 180
+A+ F+ MR G+ + IT +LSAC G L+E G+ + S G D
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEH 500
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
++ + + G L + L L + + + W A+L A G+ G+++LK
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGH---GEEVLK 551
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 124/235 (52%), Gaps = 3/235 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL-A 59
+MPV+N VSWN+++S V+ G + E ME F +MC G+ P + + S++++C G +
Sbjct: 17 IMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFR 76
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G + H ++ + + V + +++++Y G + + +F MP +NVVSW ++ +
Sbjct: 77 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 136
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G +E I++++ MR G+ +E + + ++S+C +GR G + + G+ +
Sbjct: 137 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKL 195
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
A ++ +LG G + A + ++ + D + W ++ A G++E +I
Sbjct: 196 AVENSLISMLGSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIEESFRIF 249
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 2/219 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +SWNSI + + Q G E+ +F M ++ T+ ++LS H+ G
Sbjct: 221 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 280
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + V +CN+L+ MYA G A +F MP K+++SWN ++ +
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 340
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+ + M +SG + +TFT L+AC E GR GL+ + G+ +
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS-GLFYNQII 399
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+V + G+ G + E+ ++ ++P + D V W AL+G
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGG 437
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 8/222 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW S++ + +G+ E ++++ M GV + ++ ++SSC + D +LG
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ + + + + + NSL++M G + A IF M +++ +SWN I A A +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 122 GSGKEAIEMFEKMRASGLFPDEI---TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G +E+ +F MR F DE+ T + LLS H + GR GL+ G
Sbjct: 240 GHIEESFRIFSLMRR---FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK-MGFDSV 295
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
V ++ + G EA + +++P K D + W +L+ +
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 86 MYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEIT 145
MY K G ++ A +F MP +N VSWN ++ + G E +E F KM G+ P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 146 FTGLLSACSHSG-LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
L++AC SG + G G ++ + G+ DV ++ L G G + + + ++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 205 LPMKPDAVVWGALL 218
+P + + V W +L+
Sbjct: 120 MPDR-NVVSWTSLM 132
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 214 bits (544), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 173/323 (53%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP KN VSW ++I+ Q G + A+ + M G+ P+ T+ ++LS+CS G L
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H YI DN I + + +L++MYAKCG L A +F M K+++SW +I A+
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAV 371
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +AI+ F +M SG PDE+ F +L+AC +S V++G +F M + I P +
Sbjct: 372 HGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLK 431
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HY +VDLLGR G L EA L++ +P+ PD W AL ACK + + + LLEL
Sbjct: 432 HYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLEL 491
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
G Y+ L ++ D++K R + ++ S IE+DG +F D +
Sbjct: 492 DPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYS 551
Query: 301 HEVSTSIYSMVDQLMDHLKSVGY 323
H+++ I +D+++ GY
Sbjct: 552 HKLTQEIGLKLDEIISLAIQKGY 574
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
++L+ Y G L A +F MP+KNVVSW +I + G + AI + +M GL
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
P+E T +LSACS SG + G G + GI D A +VD+ + G L A +
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDN-GIKLDRAIGTALVDMYAKCGELDCAAT 349
Query: 201 LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + K D + W A++ G Q +Q++ G
Sbjct: 350 VFSNMNHK-DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG 389
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 23/283 (8%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N N++I + + ++ F M GV PD T +L S S +G LG+
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALAL 120
H N + + SL++MYAK G L+ A +F P +++++ WNV+I
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 121 HGSGKEAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A +F M R SG +++ L+ SG + + F LM +
Sbjct: 209 AKDMHMATTLFRSMPERNSG------SWSTLIKGYVDSGELNRAKQLFELMPEK-----N 257
Query: 179 VAHYACMVDLLGRGGFLGEAMS----LIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
V + +++ + G A+S +++K +KP+ A+L AC G L G +I
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEK-GLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 235 KQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGI 276
+L+ G + D + L +MY++ D + MN I
Sbjct: 317 GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI 359
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 103/241 (42%), Gaps = 13/241 (5%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
PD + +S++ +C D A + H I + +S + L++ + + ++ I
Sbjct: 27 PDESHFISLIHACK---DTASLRHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV 159
F ++N N +I L + + ++ F M G+ PD +TF +L + S G
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGA 216
+GR F + D +VD+ + G L A + ++ P K ++W
Sbjct: 143 WLGRALHAATLKNF-VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 217 LL-GACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSG 275
L+ G C+ ++ M + + + E +SG + L Y +S + K++ ++M +
Sbjct: 202 LINGYCRA-KDMHMATTLFRSMPE---RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN 257
Query: 276 I 276
+
Sbjct: 258 V 258
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 169/292 (57%), Gaps = 16/292 (5%)
Query: 2 MPVKNAVSWNSIIS---CHVQEGQH--AEAMELFCRM--CVSGVMPDNATLVSILSSCSH 54
MP + +V+WN++I H +G H +AM LF R C SGV P + T+V +LS+ S
Sbjct: 173 MPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQ 232
Query: 55 MGDLALGKKAHDYICDNNIT--VSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWN 112
G L +G H YI T V V + +L++MY+KCG L A +F M KNV +W
Sbjct: 233 TGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWT 292
Query: 113 VIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
+ LAL+G G E + +M SG+ P+EITFT LLSA H GLVE G F M +
Sbjct: 293 SMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTR 352
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
FG++P + HY C+VDLLG+ G + EA I +P+KPDA++ +L AC +G MG++
Sbjct: 353 FGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEE 412
Query: 233 ILKQLLELGRYDSGL-------YVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
I K LLE+ R D L YV LSN+ + +W +++K+RK M + IK
Sbjct: 413 IGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIK 464
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG-----SGKEAIEMFEKMR 135
+L++ YAK G L+ A +F MP++ V+WN +IG H + ++A+ +F +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 136 --ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY--ACMVDLLGR 191
SG+ P + T +LSA S +GL+E+G G + G +P+V + +VD+ +
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK-LGFTPEVDVFIGTALVDMYSK 269
Query: 192 GGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
G L A S+ + + +K + W ++ G +L ++ E G
Sbjct: 270 CGCLNNAFSVFELMKVK-NVFTWTSMATGLALNGRGNETPNLLNRMAESG 318
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 180/312 (57%), Gaps = 2/312 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WNS++ Q G EA+ LF M S + + T ++++ +CS +G L GK
Sbjct: 468 RSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWV 527
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + + T +L++MYAKCG L A +F M +++VSW+ +I A +HG
Sbjct: 528 HHKLIISGLKDLFT-DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRI 586
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
AI F +M SG P+E+ F +LSAC HSG VE G+YYF LM S FG+SP+ H+AC
Sbjct: 587 GSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFAC 645
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+DLL R G L EA I+++P DA VWG+L+ C+ +++ K I L ++ D
Sbjct: 646 FIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD 705
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+G Y LLSN+Y+E W++ +++R M S +KK S+IEID ++F ++N +
Sbjct: 706 TGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQT 765
Query: 305 TSIYSMVDQLMD 316
IY + L +
Sbjct: 766 DEIYRFLGNLQN 777
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 34/300 (11%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV++ V+W++++S ++ G+ +A+ +F M GV PD T++S++ C+ +G L +
Sbjct: 162 MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIA 221
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I + TLCNSL+ MY+KCG L ++ IF + +KN VSW +I +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM------------ 169
++A+ F +M SG+ P+ +T +LS+C GL+ G+ G
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 170 -----------------SSTFGISPD--VAHYACMVDLLGRGGFLGEAMSLIQKL---PM 207
+ + D + + ++ L G + +A+ L +++ +
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKI 267
KPDA + + AC+ G + +GKQI ++ D + L +MYS+S D +
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTV 461
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 134/269 (49%), Gaps = 33/269 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V+WNS+IS + G +A+ LF +M + PD TL S +S+C + G + LGK+
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ +++ + NSL++MY+K G++ +A +F + ++VV+WN ++ + +G+
Sbjct: 428 HGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNS 486
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY-----FGLMSSTFGISPDV 179
EAI +F+ M S L +E+TF ++ ACS G +E G++ + F + +
Sbjct: 487 VEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALI 546
Query: 180 AHYA------------------------CMVDLLGRGGFLGEAMSLIQKLP---MKPDAV 212
YA M++ G G +G A+S ++ KP+ V
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 606
Query: 213 VWGALLGACKTFGNLEMGKQILKQLLELG 241
V+ +L AC G++E GK + G
Sbjct: 607 VFMNVLSACGHSGSVEEGKYYFNLMKSFG 635
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 4/223 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KNAVSW ++IS + + +A+ F M SG+ P+ TL S+LSSC +G + GK
Sbjct: 266 KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSV 325
Query: 65 HDYICDNNITVSV-TLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + + +L +L+ +YA+CG L + + +N+V+WN +I A G
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGM 385
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+A+ +F +M + PD T +SAC ++GLV +G+ G + T +S + +
Sbjct: 386 VIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT-DVSDEFVQNS 444
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
++D+ + G + A ++ ++ + V W ++L GN
Sbjct: 445 -LIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSMLCGFSQNGN 485
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 133/311 (42%), Gaps = 36/311 (11%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LAL 60
P ++ + +I C+V A++L+ R+ S+L +C+ + L++
Sbjct: 60 FPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV 119
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G K H I + + SL+ MY + G L A +F GMP +++V+W+ ++ +
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS---------- 170
+G +A+ MF+ M G+ PD +T ++ C+ G + + R G ++
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 171 ---------------STFGISPDVAH-----YACMVDLLGRGGFLGEAM---SLIQKLPM 207
S+ I +A + M+ RG F +A+ S + K +
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQI--LKQLLELGRYDSGLYVLLSNMYSESQRWDDMK 265
+P+ V ++L +C G + GK + EL L + L +Y+E + D +
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCE 359
Query: 266 KIRKIMNDSGI 276
+ ++++D I
Sbjct: 360 TVLRVVSDRNI 370
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 168/284 (59%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VS +S+IS + Q G + LF M +SG D+ + SIL + + + +LG
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H YI + ++ +SL+ MY+K G++ F + ++++W +I + A H
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA++++ M+ G PD++TF G+LSACSH GLVE ++ M +GI P+ H
Sbjct: 732 GKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRH 791
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVD LGR G L EA S I + +KPDA+VWG LL ACK G +E+GK K+ +EL
Sbjct: 792 YVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELE 851
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
D+G Y+ LSN+ +E WD++++ RK+M +G++K SS+
Sbjct: 852 PSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N WN+II+ ++ + +LF MCV PD+ T S+L++C+ + L GK
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ V +C +++++YAKCG + AM++F +P +VVSW V++
Sbjct: 275 ARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAF 333
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV-EMGRYYFGLMSSTFGISPDVAHYAC 184
A+E+F++MR SG+ + T T ++SAC +V E + + + S F + VA A
Sbjct: 334 SALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA--AA 391
Query: 185 MVDLLGRGG 193
++ + + G
Sbjct: 392 LISMYSKSG 400
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ W S+IS + G EA+ LF M G PD +TL ++L+ CS L G
Sbjct: 511 IPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRG 570
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H Y I + L ++L+NMY+KCG+L+ A ++ +P+ + VS + +I + H
Sbjct: 571 KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQH 630
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++ +F M SG D + +L A + S +G ++ G+ + +
Sbjct: 631 GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK-IGLCTEPSV 689
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++ + + G + + ++ PD + W AL+ + G Q+ + E G
Sbjct: 690 GSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHGKANEALQVYNLMKEKG 748
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 5/231 (2%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N +I+ Q + +A+ LF RM G+ D ++ S+LS + L LGK+ H Y
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLK 478
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEM 130
+ + + +T+ +SL +Y+KCG+L+ + +F G+P K+ W +I +G +EAI +
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 131 FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG 190
F +M G PDE T +L+ CS + G+ G GI + + +V++
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYS 597
Query: 191 RGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ G L A + +LP + D V +L+ G ++ G + + ++ G
Sbjct: 598 KCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 116/243 (47%), Gaps = 10/243 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VSW ++S + + A+E+F M SGV +N T+ S++S+C +
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM---PQKNVVSWNVIIGAL 118
+ H ++ + + ++ +L++MY+K G + + +F + ++N+V NV+I +
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSF 428
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
+ +AI +F +M GL DE + LLS + +G+ G + G+ D
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQVHGYTLKS-GLVLD 484
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ + + L + G L E+ L Q +P K D W +++ +G L + ++L
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 239 ELG 241
+ G
Sbjct: 544 DDG 546
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 23/251 (9%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + VS N +IS + Q E++ F +M G + + S++S+CS +
Sbjct: 110 IPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFS 169
Query: 62 KKAHDYICDNNITVSV----TLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII-G 116
+ +C + I + + ++L+++++K + A +F NV WN II G
Sbjct: 170 ----ELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG 225
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI- 175
AL G ++F +M PD T++ +L+AC+ + + FG + I
Sbjct: 226 ALRNQNYGA-VFDLFHEMCVGFQKPDSYTYSSVLAACA-----SLEKLRFGKVVQARVIK 279
Query: 176 --SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL-GACKT---FGNLEM 229
+ DV +VDL + G + EAM + ++P P V W +L G K+ F LE+
Sbjct: 280 CGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLSGYTKSNDAFSALEI 338
Query: 230 GKQILKQLLEL 240
K++ +E+
Sbjct: 339 FKEMRHSGVEI 349
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 77 VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA 136
V L SL++ Y+ G++ A +F +PQ +VVS N++I H +E++ F KM
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 137 SGLFPDEITFTGLLSACS------HSGLV-----EMGRYYFGLMSSTF------------ 173
G +EI++ ++SACS S LV +MG +++ ++ S
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 174 -------GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDAVVWGALLGACKT 223
+S +V + ++ R G L ++ + KPD+ + ++L AC +
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 224 FGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSE-SQRWDDMKKIRKIMNDS 274
L GK + ++++ G D + + ++Y++ + M+ +I N S
Sbjct: 264 LEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 168/285 (58%), Gaps = 2/285 (0%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K+ VSWNSII+ + + + EA++LF RM + G PD TL S+LS+ + + +L LG
Sbjct: 370 PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGM 429
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALH 121
+ H + I V + N+L+ MY++CG + + IF M ++ V++WN +IG A H
Sbjct: 430 QMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFH 488
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ EA+ +F M+++G++P ITF +L+AC+H+GLV+ + F M S + I P + H
Sbjct: 489 GNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEH 548
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y+ +V++ G EAM +I +P +PD VWGALL AC+ + N+ + + + L
Sbjct: 549 YSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLE 608
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
S YVLL NMY++ WD+ ++R M IKK R S ++
Sbjct: 609 PESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 22/247 (8%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LAL--- 60
KN VSWNS+I +++ G A LF +M + N T++ S M D AL
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWN-TMIDGYVHVSRMEDAFALFSE 337
Query: 61 --GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ AH + N +++ YA G ++ A F P+K+ VSWN II A
Sbjct: 338 MPNRDAHSW-------------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAY 384
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
+ KEA+++F +M G PD T T LLSA + + +G ++ T + PD
Sbjct: 385 EKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIPD 442
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
V + ++ + R G + E+ + ++ +K + + W A++G GN + +
Sbjct: 443 VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK 502
Query: 239 ELGRYDS 245
G Y S
Sbjct: 503 SNGIYPS 509
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ +N V+WN++IS +V+ + +A +LF M V+ N T++S SC + L
Sbjct: 66 LEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN-TMISGYVSCGGIRFLEEA 124
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+K D + + N++++ YAK + A+ +F MP++N VSW+ +I +
Sbjct: 125 RKLFDEMPSRDSFS----WNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQN 180
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A+ +F KM P GL+ S + Y L+S G V
Sbjct: 181 GEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS---GREDLVYA 237
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP 206
Y ++ G+ G + A L ++P
Sbjct: 238 YNTLIVGYGQRGQVEAARCLFDQIP 262
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 80 CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGL 139
N +N + G + A DIF + +N V+WN +I +A ++F+ M +
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 140 FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAM 199
+G +S C +E R F M S D + M+ + +GEA+
Sbjct: 103 VTWNTMISGYVS-CGGIRFLEEARKLFDEMPSR-----DSFSWNTMISGYAKNRRIGEAL 156
Query: 200 SLIQKLPMKPDAVVWGALL-GACKT 223
L +K+P + +AV W A++ G C+
Sbjct: 157 LLFEKMPER-NAVSWSAMITGFCQN 180
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 177/319 (55%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSW S+I + + + E LF + S P+ T +L++C+ + LGK+
Sbjct: 282 KDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y+ +SL++MY KCG +++A + G P+ ++VSW +IG A +G
Sbjct: 342 HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQP 401
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA++ F+ + SG PD +TF +LSAC+H+GLVE G +F ++ +S HY C
Sbjct: 402 DEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTC 461
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLL R G + S+I ++PMKP +W ++LG C T+GN+++ ++ ++L ++ +
Sbjct: 462 LVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPEN 521
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
YV ++N+Y+ + +W++ K+RK M + G+ K S EI + F+ D +H +
Sbjct: 522 PVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMY 581
Query: 305 TSIYSMVDQLMDHLKSVGY 323
I + +L +K GY
Sbjct: 582 NQIVEFLRELRKKMKEEGY 600
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 122/241 (50%), Gaps = 3/241 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
M K++ SW ++++ +V++ Q EA+ L+ M V P+ T+ +++ + + +
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H +I + L +SLM+MY KCG + A +IF + +K+VVSW +I
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+E +F ++ S P+E TF G+L+AC+ E+G+ G M+ G P
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSF 355
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ +VD+ + G + A ++ P KPD V W +L+G C G + + LL+
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 241 G 241
G
Sbjct: 415 G 415
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 20/245 (8%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
EA++L R P +T +++ CS L GKK H++I + + + N L+
Sbjct: 72 EAVQLLGR----AKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 85 NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
MYAKCG+L A +F MP +++ SWNV++ A G +EA ++F++M D
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSY 183
Query: 145 TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV------AHYACMVDLLGRGGFLGEA 198
++T +++ E + LM P++ A V + RG E
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG---KEI 240
Query: 199 MSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSES 258
I + + D V+W +L+ G ++ + I +++E D + + + Y +S
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE---KDVVSWTSMIDRYFKS 297
Query: 259 QRWDD 263
RW +
Sbjct: 298 SRWRE 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P + VSW S+I Q GQ EA++ F + SG PD+ T V++LS+C+H G + G
Sbjct: 381 PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 440
Query: 63 KAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALAL 120
+ I + + ++ + L+++ A+ G + + MP K + W ++G +
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 121 HGS 123
+G+
Sbjct: 501 YGN 503
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 182/324 (56%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +SW++II + Q G E + F M SG P + L S+LS +M + G
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG 430
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + T+ +SL+NMY+KCG+++ A IF + ++VS +I A H
Sbjct: 431 RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G KEAI++FEK G PD +TF +L+AC+HSG +++G +YF +M T+ + P H
Sbjct: 491 GKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEH 550
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y CMVDLL R G L +A +I ++ K D VVW LL ACK G++E G++ +++LEL
Sbjct: 551 YGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELD 610
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+ V L+N+YS + ++ +RK M G+ K SSI+I C F+ D+ H
Sbjct: 611 PTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFH 670
Query: 302 EVSTSIYSMVDQLMDHLKSVGYPC 325
S IY++++ + ++ + C
Sbjct: 671 PQSEDIYNILELAVSGAEAHRFDC 694
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 33/271 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSW S+I + + GQ +A+E F +M S V P+ T S+ S+C+ + L G
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + S+++ NS+M MY+ CG L +A +F GM ++++SW+ IIG
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA 389
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY------FGLMSST--- 172
G G+E + F MR SG P + LLS + ++E GR FGL ++
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR 449
Query: 173 -------------------FGIS--PDVAHYACMVDLLGRGGFLGEAMSLIQ---KLPMK 208
FG + D+ M++ G EA+ L + K+ +
Sbjct: 450 SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
PD+V + ++L AC G L++G + E
Sbjct: 510 PDSVTFISVLTACTHSGQLDLGFHYFNMMQE 540
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%), Gaps = 6/254 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +NAV+W +II+ V G++ E + F M S + D T L +C+ + + G
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG 228
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H ++ ++ + NSL MY +CG +Q + +F M +++VVSW +I A
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRI 288
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSAC-SHSGLVEMGRYYFGLMSSTFGISPDVA 180
G +A+E F KMR S + P+E TF + SAC S S LV + + ++S G++ ++
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS--LGLNDSLS 346
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
M+ + G L A L Q + + D + W ++G G E G + + +
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGGYCQAGFGEEGFKYFSWMRQS 405
Query: 241 GR--YDSGLYVLLS 252
G D L LLS
Sbjct: 406 GTKPTDFALASLLS 419
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 6/228 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLA 59
MP + VSW SII +V EA+ LF M V V PD + L +L +C ++A
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G+ H Y ++ SV + +SL++MY + G + + +F MP +N V+W II L
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPD 178
G KE + F +M S D TF L AC+ V+ G+ + ++ F +
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLC 245
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
VA+ + + G + + + L + + + D V W +L+ A K G
Sbjct: 246 VAN--SLATMYTECGEMQDGLCLFENMSER-DVVSWTSLIVAYKRIGQ 290
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 25/186 (13%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRA--SG 138
NS + G L+ A +F MP ++VSW II + EA+ +F MR
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEA 198
+ PD + +L AC S + G T +S V + ++D+ R G + ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLS-SVYVGSSLLDMYKRVGKIDKS 162
Query: 199 MSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSES 258
+ ++P + +AV W A I+ L+ GRY GL +SE
Sbjct: 163 CRVFSEMPFR-NAVTWTA----------------IITGLVHAGRYKEGL-----TYFSEM 200
Query: 259 QRWDDM 264
R +++
Sbjct: 201 SRSEEL 206
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 211 bits (536), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 177/319 (55%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+WN++IS +Q H E + F M G P+ TL S+L S ++ +L GK+ H +
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
N ++ + S+++ YAK G L A +F +++++W II A A+HG A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+F++M+ G PD++T T +LSA +HSG +M ++ F M + + I P V HYACMV +
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLY 248
L R G L +AM I K+P+ P A VWGALL G+LE+ + +L E+ ++G Y
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNY 572
Query: 249 VLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSIY 308
+++N+Y+++ RW++ + +R M G+KK S IE + F+ D + E S +Y
Sbjct: 573 TIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Query: 309 SMVDQLMDHLKSVGYPCKH 327
+++ L++ + Y K
Sbjct: 633 EIIEGLVESMSDKEYIRKQ 651
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
M ++ VSWNS+IS + Q G + +++ M S P+ T++S+ +C DL
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + +N+I + ++LCN+++ YAKCG+L A +F M +K+ V++ II
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
HG KEA+ +F +M + GL +GL+ H ++ R
Sbjct: 313 HGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR 355
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 12/250 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM----CVS--GVMPDNATLVSILSSCSHM 55
+ V+NA S+N+++ + + +A LF C S PD+ ++ +L + S
Sbjct: 83 ITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGC 142
Query: 56 GDLALG---KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWN 112
D LG ++ H ++ V + N ++ Y KC +++A +F M +++VVSWN
Sbjct: 143 DDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWN 202
Query: 113 VIIGALALHGSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSS 171
+I + GS ++ +M++ M A F P+ +T + AC S + G M
Sbjct: 203 SMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE 262
Query: 172 TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGK 231
I D++ ++ + G L A +L ++ K D+V +GA++ G ++
Sbjct: 263 NH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DSVTYGAIISGYMAHGLVKEAM 320
Query: 232 QILKQLLELG 241
+ ++ +G
Sbjct: 321 ALFSEMESIG 330
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ ++W +II+ + G A LF +M G PD+ TL ++LS+ +H GD + +
Sbjct: 430 RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHI 489
Query: 65 HD-YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS-WNVIIGALALHG 122
D + +I V ++++ ++ G L AM+ MP + W ++ ++ G
Sbjct: 490 FDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLG 549
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 175/301 (58%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MMP K+ ++W ++IS V G + EA+ F +M V P++ T S+LS+ + + DL
Sbjct: 397 MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIE 456
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + NI +++ NSL++MY KCG A IF + + N+VS+N +I +
Sbjct: 457 GLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSY 516
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G GK+A+++F + +SG P+ +TF LLSAC H G V++G YF M S++ I P
Sbjct: 517 NGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPD 576
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
HYACMVDLLGR G L +A +LI +P KP + VWG+LL A KT +++ + K+L+EL
Sbjct: 577 HYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIEL 636
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
+ YV+LS +YS + D +I I IKK S I + G + F+ D++
Sbjct: 637 EPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDES 696
Query: 301 H 301
Sbjct: 697 Q 697
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 14/280 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
M +N ++W ++I + + G + LF RM G V ++ TL + +C
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + + + L NSLM+MY+K G + A +F M K+ VSWN +I L
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
EA E+FEKM D +++T ++ S G + FG+M I+
Sbjct: 354 RKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT---- 405
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ M+ G+ EA+ K+ K P++ + ++L A + +L G QI ++
Sbjct: 406 -WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
Query: 238 LELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGI 276
+++ D + L +MY + +D KI +++ I
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 11/219 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P KNAVS+ ++I+ V+ G+ EA L+ V D+ +LS G L G
Sbjct: 139 IPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK--FRDSVASNVLLS-----GYLRAG 191
Query: 62 KKAHDYICDNNITV-SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K + V V C+S+++ Y K G + A +F M ++NV++W +I
Sbjct: 192 KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFK 251
Query: 121 HGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G ++ +F +MR G + + T + AC G GL+S + D+
Sbjct: 252 AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSR-MPLEFDL 310
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++ + + G++GEA ++ + K D+V W +L+
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNK-DSVSWNSLI 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+ +K +++ + ++ CNS ++ +A+ G LQ A IF M +++VSW +I A A
Sbjct: 33 ITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYA 92
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEIT--FTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+G +A ++F++M P +T + +++A + ++G+ Y F P
Sbjct: 93 ENGKMSKAWQVFDEM------PVRVTTSYNAMITAMIKNK-CDLGKAY-----ELFCDIP 140
Query: 178 D--VAHYACMVDLLGRGGFLGEAMSLIQKLPMK-PDAVVWGALLGACKTFGNLEMGK 231
+ YA M+ R G EA L + P+K D+V LL G L GK
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLS-----GYLRAGK 192
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/320 (34%), Positives = 179/320 (55%), Gaps = 1/320 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K +SW+S+I + QEG+ EAM LF R+ D+ L SI+ + L GK+
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ ++ NS+++MY KCG + A F M K+V+SW V+I HG G
Sbjct: 336 QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLG 395
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
K+++ +F +M + PDE+ + +LSACSHSG+++ G F + T GI P V HYAC
Sbjct: 396 KKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYAC 455
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VDLLGR G L EA LI +P+KP+ +W LL C+ G++E+GK++ K LL + +
Sbjct: 456 VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKN 515
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
YV++SN+Y ++ W++ R++ N G+KK +S +EI+ + F + +H ++
Sbjct: 516 PANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLT 575
Query: 305 TSIYSMVDQLMDHLK-SVGY 323
I + + L+ +GY
Sbjct: 576 PVIQETLKEAERRLREELGY 595
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 4/242 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW++++S HV G ++ LF M G+ P+ T + L +C + L G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + V + NSL++MY+KCG + A +F + ++++SWN +I
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 122 GSGKEAIEMFEKMRASGL--FPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPD 178
G G +A++ F M+ + + PDE T T LL ACS +G++ G+ G L+ S F
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+VDL + G+L A ++ K + W +L+ G + K+L
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKT-MISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 239 EL 240
EL
Sbjct: 306 EL 307
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV--MPDNATLVSILSSCSHMGDLALGK 62
++ +SWN++I+ V G ++A++ F M + + PD TL S+L +CS G + GK
Sbjct: 171 RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK 230
Query: 63 KAHDYICDNNI--TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H ++ + S T+ SL+++Y KCG L +A F + +K ++SW+ +I A
Sbjct: 231 QIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQ 290
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDV 179
G EA+ +F++++ D + ++ + L+ G+ L + G+ V
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 350
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+ +VD+ + G + EA ++ +K D + W ++ +G +GK+ ++ E
Sbjct: 351 LN--SVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITG---YGKHGLGKKSVRIFYE 404
Query: 240 LGRYD 244
+ R++
Sbjct: 405 MLRHN 409
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 49/270 (18%)
Query: 44 TLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM 103
LVSIL C+ G G + H Y+ + +++ N L++MY KC A +F M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 104 PQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
P++NVVSW+ ++ L+G K ++ +F +M G++P+E TF+ L AC +E G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 164 YYFGL-MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK------------------ 204
G + F + +V + +VD+ + G + EA + ++
Sbjct: 128 QIHGFCLKIGFEMMVEVGN--SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 205 ------------------LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSG 246
+ +PD +LL AC + G + GKQI L+ G +
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 247 ----------LYVLLSNMYSESQRWDDMKK 266
LYV ++S + +D +K+
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +K+ +SW +I+ + + G +++ +F M + PD +++LS+CSH G + G
Sbjct: 374 MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
++ + + + I V ++++ + G L+ A + MP K NV W ++
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCR 493
Query: 120 LHGS---GKEAIEMFEKMRA 136
+HG GKE ++ ++ A
Sbjct: 494 VHGDIELGKEVGKILLRIDA 513
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 186/325 (57%), Gaps = 1/325 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRM-CVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
N VSW++IIS + Q Q EA++ F + + + ++ T SI +CS + D +G +
Sbjct: 350 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQV 409
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H ++ S ++L+ MY+KCG L A ++F M ++V+W I A +G+
Sbjct: 410 HADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+ +FEKM + G+ P+ +TF +L+ACSH+GLVE G++ M + ++P + HY C
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC 529
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
M+D+ R G L EA+ ++ +P +PDA+ W L C T NLE+G+ ++L +L D
Sbjct: 530 MIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPED 589
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+ YVL N+Y+ + +W++ ++ K+MN+ +KK + S I+ G ++F+V DK+H +
Sbjct: 590 TAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQT 649
Query: 305 TSIYSMVDQLMDHLKSVGYPCKHSD 329
IY + + ++ + C ++
Sbjct: 650 QEIYEKLKEFDGFMEGDMFQCNMTE 674
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 40/308 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M VK V+ ++ + Q G+ +A++LF + GV D+ +L +C+ + +L LG
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + + V++ L++ Y KC + ++A F + + N VSW+ II
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 122 GSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSH------SGLVEMGRYYFGLMSSTFG 174
+EA++ F+ +R+ + + T+T + ACS G V L+ S +G
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 175 IS------------------------PDVAHYACMVDLLGRGGFLGEAMSLIQKLP---M 207
S PD+ + + G EA+ L +K+ M
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL----YVLLSNMYSESQRWDD 263
KP++V + A+L AC G +E GK L +L +Y+ Y + ++Y+ S D+
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLR--KYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 264 MKKIRKIM 271
K K M
Sbjct: 543 ALKFMKNM 550
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 2/232 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
NAVS ++IS + ++G +A+ LF M SG P ++ ++L S + L G++ H
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIH 207
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
++ + + ++ ++NMY KCG L A +F M K V+ ++ G +
Sbjct: 208 AHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRAR 267
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+A+++F + G+ D F+ +L AC+ + +G+ ++ G+ +V+ +
Sbjct: 268 DALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK-LGLESEVSVGTPL 326
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
VD + A Q++ +P+ V W A++ E + K L
Sbjct: 327 VDFYIKCSSFESACRAFQEI-REPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 33/250 (13%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
EA E M +GV + + + +C + L+ G+ HD + SV L N ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 85 NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
MY +C +L+ A +F M + N VS +I A A G +A+ +F M ASG P
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 145 TFTGLLSACSHSGLVEMGRYYF------GLMSSTFGISPDVAHY---------------- 182
+T LL + + ++ GR GL S+T + V Y
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 183 ------ACMVDLLG--RGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGK 231
AC ++G + G +A+ L L ++ D+ V+ +L AC + L +GK
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGK 305
Query: 232 QILKQLLELG 241
QI + +LG
Sbjct: 306 QIHACVAKLG 315
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 179/317 (56%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N V+WNS+ISC+ + +++LF M G+ PD+ ++ S+L + S L G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H Y I L N+L++MY KCG + A +IF M K++++WN++I H
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A+ +F++M+ +G PD++TF L+SAC+HSG VE G+ F M +GI P++ H
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YA MVDLLGR G L EA S I+ +P++ D+ +W LL A +T N+E+G ++LL +
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRME 776
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
YV L N+Y E+ ++ K+ +M + G+ K S IE+ F +
Sbjct: 777 PERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSS 836
Query: 302 EVSTSIYSMVDQLMDHL 318
+ I++++++L ++
Sbjct: 837 PMKAEIFNVLNRLKSNM 853
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 37/270 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS--GVMPDNATLVSILSSCSHMGDLA 59
M K+ V+W S+IS + G+ EA+++F M + PD+ + S+ ++C+ + L
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G + H + + ++V + +SL+++Y+KCG + A+ +F M +N+V+WN +I +
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYS 553
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ + +I++F M + G+FPD ++ T +L A S + + G+ G + GI D
Sbjct: 554 RNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGY-TLRLGIPSDT 612
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMK------------------------------- 208
++D+ + GF A ++ +K+ K
Sbjct: 613 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKA 672
Query: 209 ---PDAVVWGALLGACKTFGNLEMGKQILK 235
PD V + +L+ AC G +E GK I +
Sbjct: 673 GESPDDVTFLSLISACNHSGFVEEGKNIFE 702
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 120/237 (50%), Gaps = 6/237 (2%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WN++++ + + A++LF M V+PD+ TL +++S CS +G GK H +
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
I + T+ ++L+ +Y+KCG A +F M +K++V+W +I L +G KEA++
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 130 MFEKMR--ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+F M+ L PD T + +AC+ + G G M T G+ +V + ++D
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLID 519
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL-EMGKQILKQLLELGRY 243
L + G A+ + + + + V W +++ +C + NL E+ + +L G +
Sbjct: 520 LYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNLPELSIDLFNLMLSQGIF 574
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 3/219 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V WN +I G +++L+ + V + + L +CS + G++ H
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH 295
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + +C SL++MY+KCG + A +F + K + WN ++ A A + G
Sbjct: 296 CDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGY 355
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
A+++F MR + PD T + ++S CS GL G+ + I + +
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESAL 414
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL-GACKT 223
+ L + G +A + + + K D V WG+L+ G CK
Sbjct: 415 LTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCKN 452
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 11/220 (5%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLALGKKAHDY 67
S NS I +Q+G++ +A+ L+ + S + T S+L +CS + +L+ GK H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-------KNVVSWNVIIGALAL 120
+ + SL+NMY KCG L A+ +F G Q ++V WN +I
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG--LVEMGRYYFGLMSSTFGISPD 178
KE + F +M G+ PD + + ++S G E G+ G M + D
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLDTD 204
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++D+ + G +A + ++ K + V+W ++
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 5/219 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL--GK 62
++ WNS+I + + + E + F RM V GV PD +L ++S G+ GK
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALALH 121
+ H ++ N++ L +L++MY K G A +F + K NVV WNV+I
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + +++++ + + + +FTG L ACS S GR + G+ D
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK-MGLHNDPYV 309
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++ + + G +GEA ++ + K +W A++ A
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDK-RLEIWNAMVAA 347
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 164/259 (63%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSW SIIS V Q+ +A + F +M G+ P++AT++++L +C+ + + GK+ H
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
Y + + ++L++MY KCG + AM +F P+K V++N +I A HG
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLAD 371
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+A+E+F++M A+G D +TFT +L+ACSH+GL ++G+ F LM + + I P + HYACM
Sbjct: 372 KAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACM 431
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
VDLLGR G L EA +I+ + M+PD VWGALL AC+ GN+E+ + K L EL +S
Sbjct: 432 VDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENS 491
Query: 246 GLYVLLSNMYSESQRWDDM 264
G +LL+++Y+ + W+ +
Sbjct: 492 GNGLLLTSLYANAGSWESV 510
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 4/249 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ +I + G + E+++ F M G+ D + S+L + ++ D G
Sbjct: 77 MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + + +SL++MY+K G + A +F + ++++V +N +I A +
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANN 196
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA+ + + M+ G+ PD IT+ L+S SH E LM G PDV
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVS 255
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ ++ L +A +++ + P++ LL AC T ++ GK+I +
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSV 315
Query: 239 ELGRYDSGL 247
G D G
Sbjct: 316 VTGLEDHGF 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H ++ + I + L+ Y +CG + A +F MP++++ V+IGA A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G +E+++ F +M GL D LL A + E G+ L+ F D
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLK-FSYESDAF 153
Query: 181 HYACMVDLLGRGGFLG-------------------------------EAMSLIQK---LP 206
+ ++D+ + G +G EA++L++ L
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILK 235
+KPD + W AL+ N E +IL+
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILE 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 33/161 (20%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P K V++NS+I C+ G +A+ELF +M +G D+ T +IL++CSH G LG+
Sbjct: 350 PKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQ 409
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
L + N Y L+ + ++ L G
Sbjct: 410 ---------------NLFLLMQNKYRIVPRLE---------------HYACMVDLLGRAG 439
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
EA EM + MR PD + LL+AC + G +E+ R
Sbjct: 440 KLVEAYEMIKAMRME---PDLFVWGALLAACRNHGNMELAR 477
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 176/326 (53%), Gaps = 4/326 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +WNS++ H G H + LF RM SG+ PD TL ++L +C + L G
Sbjct: 323 MDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Query: 62 KKAHDYICD----NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
++ H Y+ N + + + NSLM+MY KCG L+ A +F M K+ SWN++I
Sbjct: 383 REIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMING 442
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+ G+ A++MF M +G+ PDEITF GLL ACSHSG + GR + M + + I P
Sbjct: 443 YGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILP 502
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
HYAC++D+LGR L EA L P+ + VVW ++L +C+ GN ++ K+L
Sbjct: 503 TSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRL 562
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
EL G YVL+SN+Y E+ +++++ +R M +KK S I + + F
Sbjct: 563 HELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTG 622
Query: 298 DKNHEVSTSIYSMVDQLMDHLKSVGY 323
++ H SI+ + ++ H+ Y
Sbjct: 623 NQTHPEFKSIHDWLSLVISHMHGHEY 648
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
++V WN++++ + Q + +A+ +F +M GV T+ S+LS+ + GD+ G+ H
Sbjct: 226 DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + N+L++MY K L+ A IF M ++++ +WN ++ G
Sbjct: 286 GLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHD 345
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM---------SSTFGIS 176
+ +FE+M SG+ PD +T T +L C + GR G M SS I
Sbjct: 346 GTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIH 405
Query: 177 -------------------------PDVAHYACMVDLLGR---GGFLGEAMSLIQKLPMK 208
D A + M++ G G + S + + +K
Sbjct: 406 NSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVK 465
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQL 237
PD + + LL AC G L G+ L Q+
Sbjct: 466 PDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
Query: 43 ATLVSILSSCSHMGDLALGKKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFF 101
AT ++ L C+ D G++ H ++ + S SL+NMYAKCG ++ A+ + F
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAV-LVF 119
Query: 102 GMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEM 161
G +++V +N +I ++GS +A+E + +MRA+G+ PD+ TF LL L ++
Sbjct: 120 GGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV 179
Query: 162 GRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+ + GL + G D + +V + + +A + +LP + D+V+W AL+
Sbjct: 180 KKVH-GL-AFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 222 KTFGNLEMGKQILKQLLELG 241
E + ++ E G
Sbjct: 238 SQIFRFEDALLVFSKMREEG 257
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ +N++IS V G +AME + M +G++PD T S+L M +L+ KK
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKV 182
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALALHGS 123
H + + L+ Y+K +++ A +F +P + + V WN ++ +
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
++A+ +F KMR G+ T T +LSA + SG ++ GR GL T G D+
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKT-GSGSDIVVSN 301
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++D+ G+ +L EA S+ + + + D W ++L
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDER-DLFTWNSVL 335
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 186/321 (57%), Gaps = 3/321 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
MP KN +SW ++I+ +V+ ++ EA+ +F +M G V P+ T VSILS+CS + L
Sbjct: 290 MPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG--MPQKNVVSWNVIIGAL 118
G++ H I + + + ++L+NMY+K G L A +F + Q++++SWN +I
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVY 409
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
A HG GKEAIEM+ +MR G P +T+ LL ACSH+GLVE G +F + +
Sbjct: 410 AHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR 469
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY C+VDL GR G L + + I + +GA+L AC + + K+++K++L
Sbjct: 470 EEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVL 529
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
E G D+G YVL+SN+Y+ + + ++ ++R M + G+KK S +++ + F+V D
Sbjct: 530 ETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGD 589
Query: 299 KNHEVSTSIYSMVDQLMDHLK 319
K+H ++ S++ L + ++
Sbjct: 590 KSHPQFEALDSILSDLRNKMR 610
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 19/230 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P ++ V+W +I+ +++ G EA ELF R+ + T +++S L++
Sbjct: 72 LPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIA 128
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ + + N V N++++ YA+ G + A+++F MP++N+VSWN ++ AL
Sbjct: 129 EMLFQEMPERN----VVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQR 184
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA+ +FE+M D +++T ++ + +G V+ R F M IS
Sbjct: 185 GRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS----- 235
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGK 231
+ M+ + + EA L Q +P + D W ++ N EM K
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPER-DFASWNTMITGF--IRNREMNK 282
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 122/306 (39%), Gaps = 77/306 (25%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSWNS++ VQ G+ EAM LF RM V+ + +++ + G +
Sbjct: 166 MPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEA 221
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL--- 118
++ D + + NI N+++ YA+ + A +F MP+++ SWN +I
Sbjct: 222 RRLFDCMPERNIIS----WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRN 277
Query: 119 ----------------------------ALHGSGKEAIEMFEKM-RASGLFPDEITFTGL 149
+ +EA+ +F KM R + P+ T+ +
Sbjct: 278 REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 150 LSACSH-SGLVEMGRYYFGLMSSTFGISPDVAHYA-----------------------CM 185
LSACS +GLVE G+ L+S + ++ A C
Sbjct: 338 LSACSDLAGLVE-GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 186 VDLL------------GRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
DL+ G G E + ++K KP AV + LL AC G +E G +
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 234 LKQLLE 239
K L+
Sbjct: 457 FKDLVR 462
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 89 KCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
K G + A +F G+P+++VV+W +I G +EA E+F+++ + + +T+T
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTA 114
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
++S S + + F M +V + M+D + G + +A+ L ++P +
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPER-----NVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQL 237
+ V W +++ A G ++ + +++
Sbjct: 170 -NIVSWNSMVKALVQRGRIDEAMNLFERM 197
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 167/285 (58%), Gaps = 5/285 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V WN++I+ + Q G +A++ F M G PD T+ SILS+C+ G L +G++
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I I ++ + N+L++MYAKCG L+ A +F + ++V N +I LA+HG G
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKG 356
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
KEA+EMF M + L PDEITF +L+AC H G + G F M T + P+V H+ C
Sbjct: 357 KEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGC 415
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG--- 241
++ LLGR G L EA L++++ +KP+ V GALLGACK + EM +Q++K + G
Sbjct: 416 LIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSIT 475
Query: 242 -RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
Y +SN+Y+ ++RW + +R M G++K +SS+
Sbjct: 476 NSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 43/268 (16%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKK 63
+N V+W +I + + + +A ELF RM + + ++ + + M D +K
Sbjct: 142 RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMED---ARK 198
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
+ I + N V + +M+ Y + G + A IF+ + +++V WN +I A +G
Sbjct: 199 FFEDIPEKNAFV----WSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGY 254
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM-------------- 169
+AI+ F M+ G PD +T + +LSAC+ SG +++GR L+
Sbjct: 255 SDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNA 314
Query: 170 --------------SSTFGISPDVAHYAC---MVDLL---GRGGFLGEAMSLIQKLPMKP 209
+S F S V AC M+ L G+G E S ++ L +KP
Sbjct: 315 LIDMYAKCGDLENATSVFE-SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKP 373
Query: 210 DAVVWGALLGACKTFGNLEMGKQILKQL 237
D + + A+L AC G L G +I ++
Sbjct: 374 DEITFIAVLTACVHGGFLMEGLKIFSEM 401
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCS-HMGDLALGKKAHDYI 68
+++I H+ G +A+ L+ + GV P L IL +C+ + + LGK H
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSES 72
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ V + +SL++MY KCG + +A +F MP++NV +WN +IG +G A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+FE++ + + +T+ ++ +E R F M +V ++ M+ +
Sbjct: 133 GLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFEL---KNVKAWSVMLGV 186
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ +A + +P K +A VW ++ G++ + I ++
Sbjct: 187 YVNNRKMEDARKFFEDIPEK-NAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ V++ NS+ISC G+ EA+E+F M + PD T +++L++C H G L G
Sbjct: 335 ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEG 394
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALAL 120
K + ++ +V L+++ + G L+ A + M K N ++GA +
Sbjct: 395 LKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKV 454
Query: 121 HGSGKEAIEMFEKMRASG 138
H + A ++ + + +G
Sbjct: 455 HMDTEMAEQVMKIIETAG 472
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 174/319 (54%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN VSWN++I + G+ +A +F + V T S L +C+ + + LG +
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV 471
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H N V + NSL++MYAKCG ++ A +F M +V SWN +I + HG G
Sbjct: 472 HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLG 531
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
++A+ + + M+ P+ +TF G+LS CS++GL++ G+ F M GI P + HY C
Sbjct: 532 RQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC 591
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MV LLGR G L +AM LI+ +P +P ++W A+L A N E ++ +++L++ D
Sbjct: 592 MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKD 651
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
YVL+SNMY+ +++W ++ IRK M + G+KK +S IE G + F V +H
Sbjct: 652 EATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDM 711
Query: 305 TSIYSMVDQLMDHLKSVGY 323
I M++ L GY
Sbjct: 712 KLINGMLEWLNMKATRAGY 730
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 5/236 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + V W+ +I+ Q G EA++LF RM + V+P+ TL SIL+ C+ LG
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + + + N+L+++YAKC + TA+ +F + KN VSWN +I
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G +A MF + + + E+TF+ L AC+ +++G GL T + VA
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-AKKVAV 486
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++D+ + G + A S+ ++ D W AL+ T G +G+Q L+ L
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHG---LGRQALRIL 538
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 2/221 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V W I+SC+V+ G ++++L M ++G MP+N T + L + +G K
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + + L+ +Y + G + A +F MP+ +VV W+ +I +G
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFC 329
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+++F +MR + + P+E T + +L+ C+ +G GL+ G D+
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV-GFDLDIYVSNA 388
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
++D+ + + A+ L +L K + V W ++ + G
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVGYENLG 428
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 82 SLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFP 141
+L+N Y+ CG++ +A +F G+ K++V W I+ +G ++++++ MR +G P
Sbjct: 186 ALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 142 DEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
+ TF L A G + + G ++ + + + P V ++ L + G + +A
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFK 303
Query: 201 LIQKLPMKPDAVVWGALLG 219
+ ++P K D V W ++
Sbjct: 304 VFNEMP-KNDVVPWSFMIA 321
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 182/324 (56%), Gaps = 6/324 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNAT---LVSILSSCSHMGDLALG 61
+N VSW S+I+ + Q + EA+ELF R + + D A L S++S+CS +G L G
Sbjct: 197 RNVVSWTSMITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLASVISACSSLGRLQWG 255
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K AH + + + SL++MYAKCG+L A IF + +V+S+ +I A A H
Sbjct: 256 KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKH 315
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+ A+++F++M A + P+ +T G+L ACSHSGLV G Y LM+ +G+ PD H
Sbjct: 316 GLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRH 375
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPD--AVVWGALLGACKTFGNLEMGKQILKQLLE 239
Y C+VD+LGR G + EA L + + + + A++WGALL A + G +E+ + K+L++
Sbjct: 376 YTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQ 435
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK 299
+ + Y+ LSN Y+ S W+D + +R M SG K RA S IE Y F D
Sbjct: 436 SNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDL 495
Query: 300 NHEVSTSIYSMVDQLMDHLKSVGY 323
+ + S I + L +K G+
Sbjct: 496 SCDESGEIERFLKDLEKRMKERGH 519
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 6/205 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNA-TLVSILSSCSHMGDLALGKKA 64
N VSW S+IS + G+ A+ +F +M +P N T S+ +CS + + +GK
Sbjct: 94 NVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNI 153
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGALALHG 122
H + + + ++ + +SL++MY KC ++TA +F M +NVVSW +I A A +
Sbjct: 154 HARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNA 213
Query: 123 SGKEAIEMFEKMRA--SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G EAIE+F A + ++ ++SACS G ++ G+ GL++ G +
Sbjct: 214 RGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRG-GYESNTV 272
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKL 205
++D+ + G L A + ++
Sbjct: 273 VATSLLDMYAKCGSLSCAEKIFLRI 297
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 47/220 (21%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG-L 139
N L+ Y K + TA +F M + NVVSW +I G + A+ MF+KM +
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 140 FPDEITFTGLLSACSH----------------SGL-------------------VEMGRY 164
P+E TF + ACS SGL VE R
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARR 187
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM-----KPDAVVWGALLG 219
F S G +V + M+ + EA+ L + + + + +++
Sbjct: 188 VF---DSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVIS 244
Query: 220 ACKTFGNLEMGKQILKQLLELGRYDSGLYVLLS--NMYSE 257
AC + G L+ GK + L+ G Y+S V S +MY++
Sbjct: 245 ACSSLGRLQWGK-VAHGLVTRGGYESNTVVATSLLDMYAK 283
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 167/284 (58%), Gaps = 5/284 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV--MPDNATLVSILSSCSHMGDLALGK 62
KN +SWN+IIS G E +E F + S V +PD TL ++LS C L LG
Sbjct: 450 KNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGS 509
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H Y+ + + N+L+NMY++CG +Q ++++F M +K+VVSWN +I A + HG
Sbjct: 510 QTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHG 569
Query: 123 SGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ A+ ++ M+ G + PD TF+ +LSACSH+GLVE G F M G+ +V H
Sbjct: 570 EGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDH 629
Query: 182 YACMVDLLGRGGFLGEAMSLIQ--KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++C+VDLLGR G L EA SL++ + + VW AL AC G+L++GK + K L+E
Sbjct: 630 FSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLME 689
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAIS 283
+ D +YV LSN+Y+ + W + ++ R+ +N G K R S
Sbjct: 690 KEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 39/272 (14%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+WN++IS + Q AM ++ RM + GV PD T S+L++ DL + +
Sbjct: 352 KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL---DLDVLEMV 408
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
I ++ + + N+L++ Y+K G ++ A +F +KN++SWN II +G
Sbjct: 409 QACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFP 468
Query: 125 KEAIEMFEKMRAS--GLFPDEITFTGLLSAC-----------SHSGLVEMGRYYFGL--- 168
E +E F + S + PD T + LLS C +H+ ++ G++ L
Sbjct: 469 FEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN 528
Query: 169 ----MSSTFGI------------SPDVAHYACMVDLLGRGGFLGEAMSLIQKL----PMK 208
M S G DV + ++ R G A++ + + +
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVI 588
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
PDA + A+L AC G +E G +I ++E
Sbjct: 589 PDAATFSAVLSACSHAGLVEEGLEIFNSMVEF 620
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 37/262 (14%)
Query: 2 MPVKNAVS-WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MP ++ V+ WN++I+ + G H ++ELF M GV D +ILS C + G L
Sbjct: 149 MPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSLDF 207
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF--FGMPQKNVVSWNVIIGAL 118
GK+ H + ++ ++ N+L+ MY C + A +F + ++ V++NV+I L
Sbjct: 208 GKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL 267
Query: 119 ALHGSGK-EAIEMFEKMRASGLFPDEITFTGLLSACS--------HSGLVEMGRYYFGLM 169
A G + E++ +F KM + L P ++TF ++ +CS H ++ G + L+
Sbjct: 268 A--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLV 325
Query: 170 SST----------FGIS---------PDVAHYACMVDLLGRGGFLGEAMSLIQKLPM--- 207
S+ FG + D+ + M+ + AMS+ +++ +
Sbjct: 326 SNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 208 KPDAVVWGALLGACKTFGNLEM 229
KPD +G+LL LEM
Sbjct: 386 KPDEFTFGSLLATSLDLDVLEM 407
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ V++ V++N +I + + E++ +F +M + + P + T VS++ SCS A+G
Sbjct: 252 VAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AMG 307
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + N+ M MY+ A +F + +K++V+WN +I +
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR---YYFGLMSSTFGIS-- 176
GK A+ ++++M G+ PDE TF LL+ ++EM + FGL SS IS
Sbjct: 368 KLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGL-SSKIEISNA 426
Query: 177 -----------------------PDVAHYACMVDLLGRGGFLGEAMS-----LIQKLPMK 208
++ + ++ GF E + L ++ +
Sbjct: 427 LISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLY-VLLSNMYSE 257
PDA LL C + +L +G Q +L G++ L L NMYS+
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQ 536
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 40/235 (17%)
Query: 11 NSIISCHVQEGQHAEAMELFCRM--CVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
N ++ + G++ A++LF + C + + PD ++ +++ H+ D G + H Y
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTT-LRPDQYSVSLAITTARHLRDTIFGGQVHCYA 83
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + + N+L+++Y + G L + F + + +V SW ++ A G + A
Sbjct: 84 IRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAF 143
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
E+F+KM D + +++ C SG E F M
Sbjct: 144 EVFDKMPER---DDVAIWNAMITGCKESGYHETSVELFREM------------------- 181
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
KL ++ D + +L C +G+L+ GKQ+ +++ G +
Sbjct: 182 --------------HKLGVRHDKFGFATILSMCD-YGSLDFGKQVHSLVIKAGFF 221
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
M K+ VSWNS+IS + + G+ A+ + M G V+PD AT ++LS+CSH G +
Sbjct: 550 MSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEE 609
Query: 61 GKKAHDYICD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS----WNVII 115
G + + + + + + +V + L+++ + G L A + + +K + S W +
Sbjct: 610 GLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEA-ESLVKISEKTIGSRVDVWWALF 668
Query: 116 GALALHGSGK 125
A A HG K
Sbjct: 669 SACAAHGDLK 678
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 184/326 (56%), Gaps = 9/326 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGV-MPDNATLVSILSSCSHMGDLAL 60
MP ++ V+WN++I Q G++ EA+ F M GV +P+ +T +++ S++
Sbjct: 185 MPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGA 244
Query: 61 GKKAHD-YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP--QKNVVSWNVIIGA 117
GK H I +V + NSL++ Y+KCG ++ ++ F + Q+N+VSWN +I
Sbjct: 245 GKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWG 304
Query: 118 LALHGSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
A +G G+EA+ MFEKM + + L P+ +T G+L AC+H+GL++ G YF + +
Sbjct: 305 YAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-D 363
Query: 177 P---DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
P ++ HYACMVD+L R G EA LI+ +P+ P W ALLG C+ N + K
Sbjct: 364 PNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLA 423
Query: 234 LKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQ 293
++LEL D YV+LSN YS + W ++ IR+ M ++G+K+ S IE+
Sbjct: 424 ASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRV 483
Query: 294 FMVDDKNHEVSTSIYSMVDQLMDHLK 319
F+ DKN+E+ +Y M+ + HL+
Sbjct: 484 FVNADKNNELKDEVYRMLALVSQHLE 509
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + +S ++I V+E +H EA + F R+ G+ P+ T +++ S + D+ LG
Sbjct: 53 IPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLG 112
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGAL---------------------------- 93
K+ H Y + +V + ++++N Y K L
Sbjct: 113 KQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKK 172
Query: 94 ---QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG-LFPDEITFTGL 149
+ A+ +F MP+++VV+WN +IG + G +EA+ F M G + P+E TF
Sbjct: 173 HEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCA 232
Query: 150 LSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKP 209
++A S+ G+ G +V + ++ + G + +++ KL +
Sbjct: 233 ITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQ 292
Query: 210 DAVV-WGALL 218
+V W +++
Sbjct: 293 RNIVSWNSMI 302
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 189/329 (57%), Gaps = 1/329 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ +++ S+++ + G+H A+ + M G+ D +L +S+ +++G L G
Sbjct: 488 MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG 547
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H Y + + + ++ NSL++MY+KCG+L+ A +F + +VVSWN ++ LA +
Sbjct: 548 KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASN 607
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A+ FE+MR PD +TF LLSACS+ L ++G YF +M + I P V H
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEH 667
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y +V +LGR G L EA +++ + +KP+A+++ LL AC+ GNL +G+ + + L L
Sbjct: 668 YVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALA 727
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D LY+LL+++Y ES + + +K R +M + + K S++E+ G + F+ +D
Sbjct: 728 PSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTR 787
Query: 302 -EVSTSIYSMVDQLMDHLKSVGYPCKHSD 329
+ + IY+ ++ + + +K G P + ++
Sbjct: 788 VDKTNGIYAEIESIKEEIKRFGSPYRGNE 816
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + +W +IS + + A A+ LF M SG P+ T S++ SC+ + D++ G
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + +SL ++Y+KCG + A ++F + + +SW ++I +L
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGA 203
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+EA++ + +M +G+ P+E TF LL A S GL E G+ + GI +V
Sbjct: 204 RKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNI-IVRGIPLNVVL 261
Query: 182 YACMVDLLGRGGFLGEAMSLI----------------------------------QKLPM 207
+VD + + +A+ ++ + L +
Sbjct: 262 KTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
+P+ + A+L C +L+ GKQI Q +++G DS
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 139/308 (45%), Gaps = 44/308 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ +SW +IS V + EA++ + M +GV P+ T V +L + S +G L GK H
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIH 247
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
I I ++V L SL++ Y++ ++ A+ + +++V W ++ + K
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAK 307
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY------FGLMSST------- 172
EA+ F +MR+ GL P+ T++ +LS CS ++ G+ G ST
Sbjct: 308 EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALV 367
Query: 173 ----------------FG--ISPDVAHYACMVDLLGRGGFLGEAMSLIQ---KLPMKPDA 211
FG +SP+V + ++ L GF+ + L+ K ++P+
Sbjct: 368 DMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNV 427
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVL---LSNMYSESQR----WDDM 264
V +L AC ++ +I LL R+ G V+ L + Y+ S++ W+ +
Sbjct: 428 VTLSGVLRACSKLRHVRRVLEIHAYLLR--RHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485
Query: 265 KKIRKIMN 272
+ +++ N
Sbjct: 486 RSMKRRDN 493
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 46 VSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ 105
+ ILS C +G H + + ++ LCN+L+++Y K + A +F M
Sbjct: 28 IRILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 106 KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEM---G 162
+ V +W V+I A A+ +FE+M ASG P+E TF+ ++ +C +GL ++ G
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRDISYGG 144
Query: 163 RYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW----GALL 218
R + ++ + F + V + + DL + G EA L L D + W +L+
Sbjct: 145 RVHGSVIKTGFEGNSVVG--SSLSDLYSKCGQFKEACELFSSL-QNADTISWTMMISSLV 201
Query: 219 GACKTFGNLEMGKQILK 235
GA K L+ +++K
Sbjct: 202 GARKWREALQFYSEMVK 218
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 162/272 (59%), Gaps = 8/272 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N V W ++IS + + EA+ELF RM + D + LS+C+ +G + +G++
Sbjct: 130 QNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEI 189
Query: 65 HDYICDN--NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ + + +TL NSL+NMY K G + A +F +K+V ++ +I AL+G
Sbjct: 190 YSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNG 249
Query: 123 SGKEAIEMFEKMRA------SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
+E++E+F+KM+ + + P+++TF G+L ACSHSGLVE G+ +F M + +
Sbjct: 250 QAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLK 309
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
P AH+ CMVDL R G L +A I ++P+KP+ V+W LLGAC GN+E+G+++ ++
Sbjct: 310 PREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRR 369
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIR 268
+ EL R G YV LSN+Y+ WD+ K+R
Sbjct: 370 IFELDRDHVGDYVALSNIYASKGMWDEKSKMR 401
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 42/238 (17%)
Query: 43 ATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG 102
+ L +I S + G++ H + + + SL+ Y+ G + A +F
Sbjct: 66 SVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDE 125
Query: 103 MPQK-NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEM 161
P+K N+V W +I A + + EAIE+F++M A + D + T LSAC+ G V+M
Sbjct: 126 TPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQM 185
Query: 162 GRYYFG--------------LMSSTFG------------------ISPDVAHYACMVDLL 189
G + L +S + DV Y M+
Sbjct: 186 GEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGY 245
Query: 190 GRGGFLGEAMSLIQKLP---------MKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
G E++ L +K+ + P+ V + +L AC G +E GK+ K ++
Sbjct: 246 ALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMI 303
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 183/318 (57%), Gaps = 1/318 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + +W+ ++ + + EA+ +F + G+ P+ T++++L C+ + L L
Sbjct: 528 MSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLV 587
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H YI + + L +L+++YAKCG+L+ A +F ++++V + ++ A+H
Sbjct: 588 RQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVH 646
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G GKEA+ ++ M S + PD + T +L+AC H+GL++ G + + + G+ P +
Sbjct: 647 GRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQ 706
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YAC VDL+ RGG L +A S + ++P++P+A +WG LL AC T+ +++G + LL+
Sbjct: 707 YACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAE 766
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
D+G +VL+SNMY+ +W+ + ++R +M +KK S +E+DG F+ D +H
Sbjct: 767 SDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSH 826
Query: 302 EVSTSIYSMVDQLMDHLK 319
SI+ +V+ L +K
Sbjct: 827 PRRDSIFDLVNALYLQMK 844
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 6/221 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG-DLAL--G 61
K+ VSWN+II+ + A+A FC M P+ AT+ ++L C+ M ++A G
Sbjct: 187 KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSG 246
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
++ H Y+ + + V +CNSL++ Y + G ++ A +F M K++VSWNV+I A
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 121 HGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ +A ++F + G + PD +T +L C+ + G+ + + D
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+ ++ R G A + K D + W A+L A
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
M K+ VSWN +I+ + + +A +LF + G V PD+ T++SIL C+ + DLA
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLAS 348
Query: 61 GKKAHDYICDNNITVSVT-LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK+ H YI ++ + T + N+L++ YA+ G A F M K+++SWN I+ A A
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
+ + + + + D +T LL C
Sbjct: 409 DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 41/269 (15%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M K+ +SWN+I+ + + + L + + D+ T++S+L C ++ +
Sbjct: 391 LMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGK 450
Query: 61 GKKAHDYICDNNI---TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVIIG 116
K+ H Y + L N+L++ YAKCG ++ A IF G+ + + +VS+N ++
Sbjct: 451 VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Query: 117 ALALHGS-------------------------------GKEAIEMFEKMRASGLFPDEIT 145
GS EAI +F +++A G+ P+ +T
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 146 FTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL 205
LL C+ + + R G + G D+ ++D+ + G L A S+ Q
Sbjct: 571 IMNLLPVCAQLASLHLVRQCHGYIIR--GGLGDIRLKGTLLDVYAKCGSLKHAYSVFQS- 627
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ D V++ A++ G GK+ L
Sbjct: 628 DARRDLVMFTAMVAGYAVHGR---GKEAL 653
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 13/241 (5%)
Query: 6 NAVSWNSIIS-CHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKK 63
+ V WN +++ V G+ E M F M + P + T +L C +GD GK
Sbjct: 86 DPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKS 143
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGAL-QTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H YI + + N+L++MYAK G + A F G+ K+VVSWN II + +
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACS---HSGLVEMGRYYFGLMSSTFGISPDV 179
+A F M P+ T +L C+ + GR + + V
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHV 263
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA----CKTFGNLEMGKQILK 235
+V R G + EA SL ++ K D V W ++ C+ F ++ ++
Sbjct: 264 FVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 236 Q 236
+
Sbjct: 323 K 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 35 VSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQ 94
+SG D+ + ++ +C+ + DL G+ H + + S++NMYAKC +
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 95 TAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR-ASGLFPDEITFTGLLSAC 153
+F M + V WN+++ L++ G+E + F+ M A P +TF +L C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 154 SHSGLVEMGRYYFGLMSSTF----GISPDVAHYACMVDLLGRGGFL-GEAMSLIQKLPMK 208
V +G Y G ++ G+ D +V + + GF+ +A + + K
Sbjct: 133 -----VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADK 187
Query: 209 PDAVVWGALLG 219
D V W A++
Sbjct: 188 -DVVSWNAIIA 197
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 166/277 (59%), Gaps = 2/277 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAE-AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
VK+ V +N+++ + G+ A+ +++++ M +G P+ +T S++ +CS + +G+
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H I + + + + +SL++MYAKCG + A +F M +KNV SW +I +G
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+ +EA+E+F +M+ + P+ +TF G LSACSHSGLV+ G F M + + P + HY
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL-G 241
AC+VDL+GR G L +A + +P +PD+ +W ALL +C GN+E+ +L +L
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNA 473
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
G Y+ LSN+Y+ + +WD++ KIR++M I K
Sbjct: 474 DKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISK 510
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 125/306 (40%), Gaps = 70/306 (22%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL--- 58
+P ++N +IS +++ G E + L RM SG D TL +L + + G
Sbjct: 95 LPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMIL 154
Query: 59 --ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV-------- 108
+L + H I ++ + L +L++ Y K G L++A +F M +NV
Sbjct: 155 PRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMIS 214
Query: 109 -----------------------VSWNVIIGALALHG-SGKEAIEMFEKMRASGLFPDEI 144
V +N ++ + G + K +++M+ M+ +G P+
Sbjct: 215 GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 145 TFTGLLSACS-----------HSGLVEMGRYYFGLMSSTF--------GIS--------- 176
TF ++ ACS H+ +++ G Y M S+ GI+
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 177 --PDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGK 231
+V + M+D G+ G EA+ L ++ ++P+ V + L AC G ++ G
Sbjct: 335 QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGY 394
Query: 232 QILKQL 237
+I + +
Sbjct: 395 EIFESM 400
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN SW S+I + + G EA+ELF RM + P+ T + LS+CSH G + G
Sbjct: 334 MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALA 119
+ + + D ++ + ++++ + G L A + MP++ + W ++ +
Sbjct: 394 YEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCN 453
Query: 120 LHGS 123
LHG+
Sbjct: 454 LHGN 457
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 167/284 (58%), Gaps = 1/284 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MPV+++V + ++ +VQ+G+ + +F M SG D+ +VS+L +C +G L G
Sbjct: 195 MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + + + L N++ +MY KC L A +F M +++V+SW+ +I L
Sbjct: 255 KSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLD 314
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + ++F++M G+ P+ +TF G+LSAC+H GLVE YF LM + I P++ H
Sbjct: 315 GDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKH 373
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YA + D + R G L EA ++ +P+KPD V GA+L CK +GN+E+G+++ ++L++L
Sbjct: 374 YASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLK 433
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI 285
+ YV L+ +YS + R+D+ + +R+ M + I K SSI
Sbjct: 434 PRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
MP +N SWN II + G +++++LF RM S V PD+ TL IL +CS +
Sbjct: 93 MPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKS 152
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G H + S+ + ++L+ MY G L A +F MP ++ V + + G
Sbjct: 153 GDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQ 212
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL---MSSTFGISP 177
G + MF +M SG D + LL AC G ++ G+ G S G++
Sbjct: 213 QGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNL 272
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
A + D+ + L A ++ + + D + W +L+ G++ M ++ ++
Sbjct: 273 GNA----ITDMYVKCSILDYAHTVFVNMSRR-DVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 238 LELG 241
L+ G
Sbjct: 328 LKEG 331
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 76 SVTLCNSLMNMYAKCGAL-QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM 134
+V L + L+ Y+K L T++ +F+ MP +N+ SWN+IIG + G ++I++F +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 135 -RASGLFPDEITFTGLLSACSHSGLVEMGRYY------FGLMSSTFGISPDVAHYACMVD 187
R S + PD+ T +L ACS S + G G SS F S V Y M
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
LL A L +P++ D+V++ A+ G G +G + +++
Sbjct: 185 LL-------HARKLFDDMPVR-DSVLYTAMFGGYVQQGEAMLGLAMFREM 226
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 162/277 (58%), Gaps = 1/277 (0%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+ +S+I+ + + G H EA+ LF + +SG PD + +L SC+ + D GK+ H Y
Sbjct: 274 VACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSY 333
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + + + +C++L++MY+KCG L+ AM +F G+P+KN+VS+N +I L LHG A
Sbjct: 334 VIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTA 393
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
E F ++ GL PDEITF+ LL C HSGL+ G+ F M S FGI P HY MV
Sbjct: 394 FEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVK 453
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
L+G G L EA + L D+ + GALL C+ N + + + + + + G +
Sbjct: 454 LMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSV 513
Query: 248 Y-VLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAIS 283
Y V+LSN+Y+ RWD+++++R +++S K IS
Sbjct: 514 YKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 34/291 (11%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+ P ++ WNSII + + Q + LF ++ S PDN T + S D
Sbjct: 65 VFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKG 124
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H + + ++++ Y+K G + A +F +P ++ WNV+I
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC 184
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC----------------------SHS-- 156
G + I +F M+ G P+ T L S SHS
Sbjct: 185 CGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYV 244
Query: 157 --GLVEMGRYYFGLMS--STFG--ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM--- 207
LV M + S S F PD+ + ++ R G EA+ L +L M
Sbjct: 245 GCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK 304
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSE 257
KPD V+ +LG+C + GK++ ++ LG D + L +MYS+
Sbjct: 305 KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSK 355
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 111/240 (46%), Gaps = 2/240 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + WN +I + G + + LF M G P+ T+V++ S L +
Sbjct: 167 IPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVA 226
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + N+ + +L+NMY++C + +A +F + + ++V+ + +I +
Sbjct: 227 WSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRC 286
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ KEA+ +F ++R SG PD + +L +C+ G+ + G+ D+
Sbjct: 287 GNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR-LGLELDIKV 345
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ ++D+ + G L AMSL +P K + V + +L+ G + ++LE+G
Sbjct: 346 CSALIDMYSKCGLLKCAMSLFAGIPEK-NIVSFNSLILGLGLHGFASTAFEKFTEILEMG 404
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 2/157 (1%)
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+K H ++ + + L YA L +A +F P+++V WN II A A
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ +F ++ S PD T+ L S S + R G+ + G+ D
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVS-GLGFDQIC 143
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ +V + G + EA L +P PD +W ++
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMI 179
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 171/284 (60%), Gaps = 2/284 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V++ V W+S+IS + + G +E M L +M G+ ++ TL++I+S+C++ L+
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H I + L N+L++MYAKCG+L A ++F+ + +K++VSW+ +I A LHG
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGH 434
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
G EA+E+F+ M G D++ F +LSAC+H+GLVE + F + + + + HYA
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYA 493
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEM-GKQILKQLLELGR 242
C ++LLGR G + +A + +PMKP A +W +LL AC+T G L++ GK I +L++
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEP 553
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+ YVLLS +++ES + +++R++M + KC S IE
Sbjct: 554 DNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG-DLAL 60
M VKN VSW ++IS V + ++LF M + P+ TL+S+L +C + +L
Sbjct: 211 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSL 270
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K+ H + + L + M MY +CG + + +F ++VV W+ +I A
Sbjct: 271 VKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAE 330
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G E + + +MR G+ + +T ++SAC++S L+ + G +
Sbjct: 331 TGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC-GFMSHIL 389
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
++D+ + G L A + +L K D V W +++ A G+ +I K +++
Sbjct: 390 LGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAYGLHGHGSEALEIFKGMIKG 448
Query: 241 G 241
G
Sbjct: 449 G 449
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLA-LGKK 63
++ VS+ SII+ Q+G EAM+L M G +P + + S+L+ C+ MG + + +
Sbjct: 111 RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARM 170
Query: 64 AHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H + D + SV L +L++MY K A +F M KN VSW +I +
Sbjct: 171 FHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQ 230
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS------ 176
+ + +++F M+ L P+ +T +L AC VE+ Y L+ G S
Sbjct: 231 NYEMGVDLFRAMQRENLRPNRVTLLSVLPAC-----VELN-YGSSLVKEIHGFSFRHGCH 284
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
D A + + R G + + L + ++ D V+W +++ G+ +L Q
Sbjct: 285 ADERLTAAFMTMYCRCGNVSLSRVLFETSKVR-DVVMWSSMISGYAETGDCSEVMNLLNQ 343
Query: 237 LLELG 241
+ + G
Sbjct: 344 MRKEG 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Query: 42 NATLVSILSSCSHMGD-LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
A L S++ +C+ + LG + H + NSL++MYAK +F
Sbjct: 46 TAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVF 105
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LV 159
M ++ VS+ II + G EA+++ ++M G P LL+ C+ G
Sbjct: 106 DEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSS 165
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
++ R + L+ + V +VD+ + A + ++ +K + V W A++
Sbjct: 166 KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMIS 224
Query: 220 ACKTFGNLEMGKQILKQL 237
C N EMG + + +
Sbjct: 225 GCVANQNYEMGVDLFRAM 242
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 167/286 (58%), Gaps = 5/286 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN+VSW++++ + Q G+H +A+E+F M D ++L +C+ + + LG
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLG 381
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H +V + ++L+++Y K G + +A ++ M +N+++WN ++ ALA +
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G G+EA+ F M G+ PD I+F +L+AC H+G+V+ GR YF LM+ ++GI P H
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH 501
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL-EMGKQILKQLLEL 240
Y+CM+DLLGR G EA +L+++ + DA +WG LLG C + + ++I K+++EL
Sbjct: 502 YSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMEL 561
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
YVLLSNMY R D IRK+M G+ K S I+
Sbjct: 562 EPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 128/243 (52%), Gaps = 11/243 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV-SGVMPDNATLVSILSSCSHMGDLAL 60
MP + + W +++S + + EA+ LF M G++PD +T ++L++C ++ L
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK+ H + N I +V + +SL++MY KCG+++ A +F GM +KN VSW+ ++G
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQ 343
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG--LMSSTFGISPD 178
+G ++AIE+F +M L+ F +L AC+ V +G+ G + FG +
Sbjct: 344 NGEHEKAIEIFREMEEKDLY----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG---N 396
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
V + ++DL G+ G + A + K+ ++ + + W A+L A G E ++
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 239 ELG 241
+ G
Sbjct: 456 KKG 458
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 126/241 (52%), Gaps = 3/241 (1%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
VK+A+SW S++S +V +H +A+E+F M G+ + TL S + +CS +G++ LG+
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + + + ++L +Y A +F MP+ +V+ W ++ A + +
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 124 GKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+EA+ +F M R GL PD TF +L+AC + ++ G+ G + T GI +V
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL-ITNGIGSNVVVE 303
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
+ ++D+ G+ G + EA + + K ++V W ALLG G E +I +++ E
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 362
Query: 243 Y 243
Y
Sbjct: 363 Y 363
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 143/335 (42%), Gaps = 57/335 (17%)
Query: 21 GQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLC 80
GQ EA+ + S + S+L +C+ + G + H ++ + + +
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 81 NSLMNMYAKCG-ALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGL 139
NSL+++Y K G ++ +F G K+ +SW ++ +A+E+F +M + GL
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 140 FPDEITFTGLLSACSHSGLVEMGRYYFGL-----------MSST----FGIS-------- 176
+E T + + ACS G V +GR + G+ +SST +G++
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 177 -------PDVAHYACMVDLLGRGGFLGEAMSLIQKL----PMKPDAVVWGALLGACKTFG 225
PDV + ++ + EA+ L + + PD +G +L AC
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 226 NLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWD------DMKKIRKIMNDSGIKKC 279
L+ GK+I +L+ G + SN+ ES D +++ R++ N G+ K
Sbjct: 280 RLKQGKEIHGKLITNG--------IGSNVVVESSLLDMYGKCGSVREARQVFN--GMSKK 329
Query: 280 RAIS-SIEIDGCCYQFMVDDKNHEVSTSIYSMVDQ 313
++S S + G C + HE + I+ +++
Sbjct: 330 NSVSWSALLGGYC-----QNGEHEKAIEIFREMEE 359
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 168/322 (52%), Gaps = 35/322 (10%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ +SW ++++ + G + EA++LFC M V G+ PD S+LS+ + + L G
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + S+++ NSL+ MY KCG+L+ A IF M +++++W
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITW---------- 499
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
T L+ + +GL+E + YF M + +GI+P H
Sbjct: 500 -------------------------TCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEH 534
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
YACM+DL GR G + L+ ++ ++PDA VW A+L A + GN+E G++ K L+EL
Sbjct: 535 YACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELE 594
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
++ YV LSNMYS + R D+ +R++M I K S +E G + FM +D+ H
Sbjct: 595 PNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRH 654
Query: 302 EVSTSIYSMVDQLMDHLKSVGY 323
IYS VD++M +K GY
Sbjct: 655 PRMVEIYSKVDEMMLLIKEAGY 676
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 3/220 (1%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
PVKN +SWN++IS + + G EA LF M G+ P+ TL S+L C+ + L G+
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALALH 121
+ H + + V + N L+ MYA+C + A +F M +KN V+W ++ + +
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +AIE F +R G ++ TF +L+AC+ +G + + G ++
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYV 264
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC 221
+ ++D+ + + A +L++ + + D V W +++ C
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGC 303
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 37/299 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN V+W S+++ + Q G +A+E F + G + T S+L++C+ + +G +
Sbjct: 190 KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQV 249
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + ++ + ++L++MYAKC +++A + GM +VVSWN +I G
Sbjct: 250 HCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLI 309
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLL------------SACSHSGLVEMGRYYF------ 166
EA+ MF +M + D+ T +L ++ +H +V+ G +
Sbjct: 310 GEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA 369
Query: 167 --------GLMSSTFG-----ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPD 210
G+M S I DV + +V G EA+ L + + PD
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDMKKI 267
+V ++L A LE G+Q+ ++ G + S L V L MY++ +D I
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSG-FPSSLSVNNSLVTMYTKCGSLEDANVI 487
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
N+++ Y+ L A +F P KN +SWN +I GS EA +F +M++ G+
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMS 200
P+E T +L C+ L+ G G T G DV ++ + + + EA
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT-GFDLDVNVVNGLLAMYAQCKRISEAEY 181
Query: 201 LIQKLPMKPDAVVWGALL 218
L + + + + V W ++L
Sbjct: 182 LFETMEGEKNNVTWTSML 199
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 166/302 (54%), Gaps = 6/302 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+W +IS VQ AEA L M G+ P N+T +LSS +L GK
Sbjct: 429 KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
Query: 65 HDYICDNN--ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H I + L NSL++MYAKCGA++ A +IF M QK+ VSWN +I L+ HG
Sbjct: 489 HCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHG 548
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+A+ +F++M SG P+ +TF G+LSACSHSGL+ G F M T+ I P + HY
Sbjct: 549 LADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHY 608
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGAC----KTFGNLEMGKQILKQLL 238
M+DLLGR G L EA I LP PD V+GALLG C + + ++ +LL
Sbjct: 609 ISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLL 668
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
EL ++ +V L N+Y+ R D K++RK M G+KK S + ++G F+ D
Sbjct: 669 ELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGD 728
Query: 299 KN 300
K+
Sbjct: 729 KS 730
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 24/240 (10%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD-LALGK 62
+ V W S++S + + G EA LF M ++ NA L + C M + L +
Sbjct: 74 INRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK-CRRMNEAWTLFR 132
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ + + ++ LC+ G + A+++F MP++NVVSWN ++ L +G
Sbjct: 133 EMPKNVVSWTVMLT-ALCDD--------GRSEDAVELFDEMPERNVVSWNTLVTGLIRNG 183
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
++A ++F+ M + D +++ ++ + +E + FG MS +V +
Sbjct: 184 DMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK-----NVVTW 234
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
MV R G + EA L ++P + + V W A++ F E+ ++ L LE+ +
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPER-NIVSWTAMISG---FAWNELYREALMLFLEMKK 290
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSWN++++ ++ G +A ++F M V+ NA + + + G
Sbjct: 164 MPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIEND--------G 215
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ + + +V S++ Y + G ++ A +F MP++N+VSW +I A +
Sbjct: 216 MEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWN 275
Query: 122 GSGKEAIEMFEKMR--ASGLFPDEITFTGLLSACSHSGLVEMGR 163
+EA+ +F +M+ + P+ T L AC G VE R
Sbjct: 276 ELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG-VEFRR 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VSWNS+I G +A+ LF M SG P++ T + +LS+CSH G + G
Sbjct: 529 MVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRG 588
Query: 62 KKAHDYICDN-NITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
+ + + +I + S++++ + G L+ A + +P + + ++G
Sbjct: 589 LELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCG 648
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-HSGL 158
L+ K+A + E+ L D + G ++ C+ ++GL
Sbjct: 649 LNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGL 688
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 4/305 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+ P KN V+W ++I+ + + G +A+ F M SGV D+ ++L +CS + L
Sbjct: 296 LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH 355
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H + + N+L+N+YAKCG ++ A F + K++VSWN ++ A +
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGV 415
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG +A+++++ M ASG+ PD +TF GLL+ CSHSGLVE G F M + I +V
Sbjct: 416 HGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVD 475
Query: 181 HYACMVDLLGRGGFLGEAMSLIQK----LPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
H CM+D+ GRGG L EA L + + W LLGAC T + E+G+++ K
Sbjct: 476 HVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKV 535
Query: 237 LLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV 296
L + +VLLSN+Y + RW + + +R+ M + G+KK S IE+ F+V
Sbjct: 536 LKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVV 595
Query: 297 DDKNH 301
D +H
Sbjct: 596 GDSSH 600
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 36/267 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + V+WN++++ + + G H EA+ LF ++ S PD+ + +ILS+C+ +G++ G
Sbjct: 30 MPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFG 89
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCG------------------------------ 91
+K + + S+ + NSL++MY KC
Sbjct: 90 RKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYM 149
Query: 92 ---ALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
+ A+D+F MP++ +WN++I A G + + +F++M S PD TF+
Sbjct: 150 NAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSS 209
Query: 149 LLSACS-HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM 207
L++ACS S V GR +M G S V ++ + G +AM ++ + +
Sbjct: 210 LMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV 268
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQIL 234
V W +++ AC G E ++
Sbjct: 269 LTQ-VSWNSIIDACMKIGETEKALEVF 294
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 122/303 (40%), Gaps = 65/303 (21%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCS-HMGDLAL 60
MP + A +WN +IS H G+ + LF M S PD T S++++CS ++
Sbjct: 164 MPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY 223
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGA---------------------------- 92
G+ H + N + +V NS+++ Y K G+
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 93 ---LQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGL 149
+ A+++F P+KN+V+W +I +G G++A+ F +M SG+ D + +
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV 343
Query: 150 LSACSHSGLVEMGRYYFGLM----------------------------SSTFG--ISPDV 179
L ACS L+ G+ G + FG + D+
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL 403
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
+ M+ G G +A+ L + +KPD V + LL C G +E G I +
Sbjct: 404 VSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFES 463
Query: 237 LLE 239
+++
Sbjct: 464 MVK 466
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 73 ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFE 132
++V V L + + ++ AK G + +A +F GMP+ + V+WN ++ + + G +EAI +F
Sbjct: 1 MSVLVRLTSKIASL-AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFT 59
Query: 133 KMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
++R S PD+ +FT +LS C+ G V+ GR
Sbjct: 60 QLRFSDAKPDDYSFTAILSTCASLGNVKFGR 90
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 153/270 (56%), Gaps = 1/270 (0%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLALGKKAHDYI 68
WNS+IS +A+ LF RM + V+ P+ + ++LSSCS + L G++ H +
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + +L +MY KCG + +A F + +KN V WN +I +G G EA+
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAV 605
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
++ KM +SG PD ITF +L+ACSHSGLVE G M GI P++ HY C+VD
Sbjct: 606 GLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDC 665
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLY 248
LGR G L +A L + P K +V+W LL +C+ G++ + +++ ++L+ L S Y
Sbjct: 666 LGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAY 725
Query: 249 VLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
VLLSN YS ++WDD ++ +MN + + K
Sbjct: 726 VLLSNTYSSLRQWDDSAALQGLMNKNRVHK 755
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ VSWN++IS V++G +A+ ++ RM G +P TL S+LS+CS + D G
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFG 157
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGAL-QTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H + ++ + N+L++MYAKCG + + +F + Q N VS+ +IG LA
Sbjct: 158 MRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLS 151
EA++MF M G+ D + + +LS
Sbjct: 218 ENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 37/303 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P + +WN+++S + + EA+ F +M + PD TL ILSSC+ + L G
Sbjct: 376 IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG-MPQKNVVSWNVIIGALAL 120
K+ H + I+ + + + L+ +Y++C ++ + IF + + ++ WN +I
Sbjct: 436 KQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRH 495
Query: 121 HGSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
+ +A+ +F +M + + P+E +F +LS+CS + GR + GL+ + +S
Sbjct: 496 NMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSF 555
Query: 180 AHYAC------------------------------MVDLLGRGGFLGEAMSLIQKL---P 206
A M+ G G EA+ L +K+
Sbjct: 556 VETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSG 615
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL--YVLLSNMYSESQRWDDM 264
KPD + + ++L AC G +E G +IL + + + L Y+ + + + R +D
Sbjct: 616 EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDA 675
Query: 265 KKI 267
+K+
Sbjct: 676 EKL 678
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 35/171 (20%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N VSWN +I QE + +++E RM SG P+ T +S+L +C GD+ G
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ IF +PQ +V +WN ++ + +
Sbjct: 370 RR-----------------------------------IFSSIPQPSVSAWNAMLSGYSNY 394
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
+EAI F +M+ L PD+ T + +LS+C+ +E G+ G++ T
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT 445
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 8/211 (3%)
Query: 52 CSHMGDLALGKKAHDY---ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV 108
C+ + DL + DY + D V N+ + K G L A ++F GMP+++V
Sbjct: 44 CNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDV 103
Query: 109 VSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL 168
VSWN +I L G ++A+ ++++M G P T +LSACS G G+
Sbjct: 104 VSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGV 163
Query: 169 MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
T G+ ++ ++ + + GF+ + + + +P+ V + A++G +
Sbjct: 164 AVKT-GLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVL 222
Query: 229 MGKQILKQLLELG-RYDSGLYVLLSNMYSES 258
Q+ + + E G + DS V LSN+ S S
Sbjct: 223 EAVQMFRLMCEKGVQVDS---VCLSNILSIS 250
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 28/145 (19%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG--- 61
KN V WN +I + G+ EA+ L+ +M SG PD T VS+L++CSH G + G
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Query: 62 ----KKAH-------DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVV 109
++ H YIC +++ + G L+ A + P K + V
Sbjct: 643 LSSMQRIHGIEPELDHYIC-------------IVDCLGRAGRLEDAEKLAEATPYKSSSV 689
Query: 110 SWNVIIGALALHGSGKEAIEMFEKM 134
W +++ + +HG A + EK+
Sbjct: 690 LWEILLSSCRVHGDVSLARRVAEKL 714
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 167/278 (60%), Gaps = 7/278 (2%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M+P K+ VSWNS+++ ++ G EA+++F M +G+ PD + S+L+
Sbjct: 255 MIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL---SFKH 311
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H ++ + +++ N+L+ +Y+K G L A IF M +++ VSWN II A
Sbjct: 312 GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA--- 368
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
H ++ FE+M + PD ITF +LS C+++G+VE G F LMS +GI P +
Sbjct: 369 HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKME 428
Query: 181 HYACMVDLLGRGGFLGEAMSLI-QKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HYACMV+L GR G + EA S+I Q++ ++ VWGALL AC GN ++G+ ++L E
Sbjct: 429 HYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
L + + LL +YS+++R +D++++R++M D G++
Sbjct: 489 LEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 5/212 (2%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+WNS+IS + + GQ+ +AM L+ +M GV PD T +L +C +G + +G+ H +
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
V + N+L+ MYAKCG + A ++F +P K+ VSWN ++ HG EA+
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
++F M +G+ PD++ + +L+ + GR G + G+ +++ ++ L
Sbjct: 282 DIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVIRR-GMEWELSVANALIVL 337
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+ G LG+A + ++ ++ D V W A++ A
Sbjct: 338 YSKRGQLGQACFIFDQM-LERDTVSWNAIISA 368
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 39 MPDNATLVSILSSCSHMGDLALGKKAH----DYICDNNITVSVTLCNSLMNMYAKCGALQ 94
+ + S+L +C + + G + H Y+ NN+ +S + L+ +YA CG +
Sbjct: 89 LTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGIS----SKLVRLYASCGYAE 144
Query: 95 TAMDIFFGMPQKN--VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
A ++F M +++ +WN +I A G ++A+ ++ +M G+ PD TF +L A
Sbjct: 145 VAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKA 204
Query: 153 CSHSGLVEMGR-YYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDA 211
C G V++G + L+ FG DV +V + + G + +A ++ +P K D
Sbjct: 205 CGGIGSVQIGEAIHRDLVKEGFGY--DVYVLNALVVMYAKCGDIVKARNVFDMIPHK-DY 261
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELG 241
V W ++L G L I + +++ G
Sbjct: 262 VSWNSMLTGYLHHGLLHEALDIFRLMVQNG 291
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 166/309 (53%), Gaps = 33/309 (10%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRM-----------CVSGVM----------- 39
+P +NAV WN++IS + G+ EA+EL+ M + G++
Sbjct: 109 IPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIE 168
Query: 40 -----------PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYA 88
P+ TL++++S+CS +G L K+ H Y N I L + L+ Y
Sbjct: 169 FYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYG 228
Query: 89 KCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
+CG++ +F M ++VV+W+ +I A ALHG + A++ F++M + + PD+I F
Sbjct: 229 RCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLN 288
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
+L ACSH+GL + YF M +G+ HY+C+VD+L R G EA +IQ +P K
Sbjct: 289 VLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK 348
Query: 209 PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIR 268
P A WGALLGAC+ +G +E+ + ++LL + + YVLL +Y R ++ +++R
Sbjct: 349 PTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLR 408
Query: 269 KIMNDSGIK 277
M +SG+K
Sbjct: 409 LKMKESGVK 417
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSI-LSSCSHMGDLALGKKAHD 66
+S +S + +G H +A+ LF +M S +P +A + S+ L SC+ LG H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
+ +N + + +L++MY KC ++ A +F +PQ+N V WN +I G KE
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
A+E++E M + P+E +F ++ GL+ + G + Y M+
Sbjct: 133 AVELYEAM---DVMPNESSFNAIIK---------------GLVGTEDGSYRAIEFYRKMI 174
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
+ KP+ + AL+ AC G + K+I
Sbjct: 175 EFR-----------------FKPNLITLLALVSACSAIGAFRLIKEI 204
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 180/320 (56%), Gaps = 5/320 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N VSW S+IS VQ G+ A+ F +M + P++ TL S L CS++ G++ H
Sbjct: 332 NQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIH 391
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + L+++Y KCG A +F + + +V+S N +I + A +G G+
Sbjct: 392 GIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGR 451
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF-GLMSSTFGISPDVAHYAC 184
EA+++FE+M GL P+++T +L AC++S LVE G F ++ D HYAC
Sbjct: 452 EALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTND--HYAC 509
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLGR G L EA L ++ + PD V+W LL ACK +EM ++I +++LE+ D
Sbjct: 510 MVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGD 568
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDK-NHEV 303
G +L+SN+Y+ + +W+ + +++ M D +KK A+S +EI+ + FM D +H
Sbjct: 569 EGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPN 628
Query: 304 STSIYSMVDQLMDHLKSVGY 323
S I +++L+ K +GY
Sbjct: 629 SEQILENLEELIKKSKDLGY 648
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V ++I + Q+G+ EA++ F M V V P+ T S+L SC ++ D+ GK
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + ++ SL+ MY +C + ++ +F + N VSW +I L +G
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGRE 349
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ A+ F KM + P+ T + L CS+ + E GR G+++ +G D +
Sbjct: 350 EMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK-YGFDRDKYAGSG 408
Query: 185 MVDLLGRGG 193
++DL G+ G
Sbjct: 409 LIDLYGKCG 417
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 113/230 (49%), Gaps = 3/230 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ V+WNS+I+ ++ + EA+E++ M + V+PD TL S+ + S +
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 62 KKAHDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+++H + VS V + ++L++MY K G + A + + +K+VV +I +
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G EA++ F+ M + P+E T+ +L +C + + G+ GLM + G +A
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS-GFESALA 303
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMG 230
++ + R + +++ + + + P+ V W +L+ G EM
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMA 352
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
+ L++ KCG + A +F GM ++++V+WN +I L H KEA+EM+ M + +
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 141 PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS-PDVAHYACMVDLLGRGGFLGEAM 199
PDE T + + A S L + + GL + G+ +V + +VD+ + G EA
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGL-AVILGLEVSNVFVGSALVDMYVKFGKTREAK 221
Query: 200 SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++ ++ K ++ ++G + + E K L+E
Sbjct: 222 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVE 261
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 173/318 (54%), Gaps = 8/318 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL- 60
+ + +SWN++IS Q G EA+++F + MP+ T S+L++ + D+++
Sbjct: 433 ITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVK 491
Query: 61 -GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G++ H ++ + + ++L++MYAK G + + +F M QKN W II A +
Sbjct: 492 QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS 551
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG + + +F KM + PD +TF +L+AC+ G+V+ G F +M + + P
Sbjct: 552 SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+CMVD+LGR G L EA L+ ++P P + ++LG+C+ GN++MG ++ + +E
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAME 671
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI---DGCCYQ--F 294
+ SG YV + N+Y+E + WD +IRK M + K S I++ +G F
Sbjct: 672 MKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGF 731
Query: 295 MVDDKNHEVSTSIYSMVD 312
DK+H S IY MV+
Sbjct: 732 SSGDKSHPKSDEIYRMVE 749
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 10/219 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHA-EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M K+ +SWNS++S QEG EA+ +F M GV D+ + S++++C H DL L
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
++ H + + N LM+ Y+KCG L+ +F M ++NVVSW +I +
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS--- 351
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDV 179
+ +A+ +F MR G++P+E+TF GL++A + ++ G GL + + F P V
Sbjct: 352 --NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ + L + L +A + + + + + W A++
Sbjct: 410 GN--SFITLYAKFEALEDAKKAFEDITFR-EIISWNAMI 445
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSWN+I+S + A+ RM +GV+ D T + LS C LG +
Sbjct: 141 DVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS-G 124
+ + + + NS + MY++ G+ + A +F M K+++SWN ++ L+ G+ G
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG 257
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL 168
EA+ +F M G+ D ++FT +++ C H +++ R GL
Sbjct: 258 FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGL 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 14/228 (6%)
Query: 5 KNAV-SWNSIISCHVQEGQHAEAMELF---CRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+NA S N IS ++ A A+ +F ++ G D TL L +C GDL
Sbjct: 37 RNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKR 94
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + H + + T V + N++M MY K G A+ IF + +VVSWN I+
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF-- 152
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ A+ +M+++G+ D T++ LS C S +G + T G+ D+
Sbjct: 153 -DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT-GLESDLV 210
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACK---TFG 225
+ + R G A + ++ K D + W +LL TFG
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSGLSQEGTFG 257
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 153/280 (54%), Gaps = 3/280 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP KN +SWN +IS ++ ++ LF M +G + +TLV +L++C L G
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + SV + +L++MY KC + A IF + +N V+WNV+I A LH
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLH 329
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G + +E+FE M L PDE+TF G+L C+ +GLV G+ Y+ LM F I P+ H
Sbjct: 330 GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGH 389
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
CM +L GF EA ++ LP + P++ W LL + + GN +G+ I K L+
Sbjct: 390 QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLI 449
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
E + Y LL N+YS + RW+D+ ++R+++ + I +
Sbjct: 450 ETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGR 489
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 33/259 (12%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N + ++ +A+ + + G +PD+ T VS++S + GK H
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFG---------------------------- 102
+ + + NSLM+MY CGAL A +F
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 103 ---MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV 159
MP KN++SWN++I A + +I +F +M +G +E T LL+AC S +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
+ GR + TF ++ V ++D+ G+ +G A + L ++ + V W ++
Sbjct: 267 KEGRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMIL 324
Query: 220 ACKTFGNLEMGKQILKQLL 238
A G E G ++ + ++
Sbjct: 325 AHCLHGRPEGGLELFEAMI 343
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 159/274 (58%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ +SWNS+ + Q G E +E F +M + D +L S++S+C+ + L LG++
Sbjct: 413 KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV 472
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
+ + +SL+++Y KCG ++ +F M + + V WN +I A +G G
Sbjct: 473 FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQG 532
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EAI++F+KM +G+ P +ITF +L+AC++ GLVE GR F M G PD H++C
Sbjct: 533 FEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSC 592
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLL R G++ EA++L++++P D +W ++L C G MGK+ ++++EL +
Sbjct: 593 MVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPEN 652
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
S YV LS +++ S W+ +RK+M ++ + K
Sbjct: 653 SVAYVQLSAIFATSGDWESSALVRKLMRENNVTK 686
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 114/247 (46%), Gaps = 34/247 (13%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
WNS+IS ++ EA+ LF M + D+ TL +++++C +G L GK+ H + C
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 70 DNNITVSVTLCNSLMNMYAKCGA-------------------------------LQTAMD 98
+ + + ++L++MY+KCG+ + A
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
+F + K+++SWN + + +G E +E F +M L DE++ + ++SAC+
Sbjct: 406 VFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Query: 159 VEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+E+G F ++ G+ D + ++DL + GF+ + + +K D V W +++
Sbjct: 466 LELGEQVFA-RATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMI 523
Query: 219 GACKTFG 225
T G
Sbjct: 524 SGYATNG 530
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 21/235 (8%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTL-CNSL 83
+AME+ CR V +L SCS L ++ + + S+ + N L
Sbjct: 19 QAMEVDCR----------RYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHL 68
Query: 84 MNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDE 143
+ MY++ G + A ++F MP +N SWN +I G ++ F+ M D
Sbjct: 69 LQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER----DG 124
Query: 144 ITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ 203
++ ++S + +G + + R F M DV ++ G+ EA+ L +
Sbjct: 125 YSWNVVVSGFAKAGELSVARRLFNAMP-----EKDVVTLNSLLHGYILNGYAEEALRLFK 179
Query: 204 KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSE 257
+L DA+ +L AC L+ GKQI Q+L G DS + L N+Y++
Sbjct: 180 ELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAK 234
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 37/267 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ V+ NS++ ++ G EA+ LF + S D TL ++L +C+ + L G
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACAELEALKCG 206
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTA------------------------- 96
K+ H I + + +SL+N+YAKCG L+ A
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 97 ------MDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLL 150
+F + V+ WN +I + EA+ +F +MR D T ++
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR-EDSRTLAAVI 325
Query: 151 SACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
+AC G +E G+ + FG+ D+ + ++D+ + G EA L ++ D
Sbjct: 326 NACIGLGFLETGK-QMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYD 383
Query: 211 AVVWGALLGACKTFGNLEMGKQILKQL 237
++ +++ + G ++ K++ +++
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERI 410
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N SWN++I ++ G+ ++ F +MP+
Sbjct: 88 MPDRNYFSWNTMIEGYMNSGEKGTSLRFF------DMMPE-------------------- 121
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ + + N+ VS +AK G L A +F MP+K+VV+ N ++ L+
Sbjct: 122 RDGYSW----NVVVS---------GFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+ +F+++ S D IT T +L AC+ ++ G+ + G+ D
Sbjct: 169 GYAEEALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQI-LIGGVECDSKM 224
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
+ +V++ + G L A +++++ +PD AL+ G + + + +
Sbjct: 225 NSSLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALISGYANCGRVNESRGLFDR 278
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M + V WNS+IS + GQ EA++LF +M V+G+ P T + +L++C++ G + G
Sbjct: 511 MVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEG 570
Query: 62 KKAHDYI-CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP 104
+K + + D+ + ++++ A+ G ++ A+++ MP
Sbjct: 571 RKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 173/315 (54%), Gaps = 3/315 (0%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ N +SW ++++ VQ G EA+ +M SG+ P+ ++ LS+C+H+ L +G+
Sbjct: 508 IPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRT 567
Query: 64 AHDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H YI N S V++ SL++MYAKCG + A +F + N +I A AL+G
Sbjct: 568 IHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYG 627
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+ KEAI ++ + GL PD IT T +LSAC+H+G + F + S + P + HY
Sbjct: 628 NLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHY 687
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
MVDLL G +A+ LI+++P KPDA + +L+ +C E+ + ++LLE
Sbjct: 688 GLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEP 747
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDG--CCYQFMVDDKN 300
+SG YV +SN Y+ WD++ K+R++M G+KK S I+I G + F+ +DK
Sbjct: 748 ENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKT 807
Query: 301 HEVSTSIYSMVDQLM 315
H I M+ L+
Sbjct: 808 HTRINEIQMMLALLL 822
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 128/232 (55%), Gaps = 4/232 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+WN IIS +VQ+G +A+ + M + + D TL +++S+ + +L LGK+
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV 397
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
Y ++ + L +++M+MYAKCG++ A +F +K+++ WN ++ A A G
Sbjct: 398 QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLS 457
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA+ +F M+ G+ P+ IT+ ++ + +G V+ + F M S+ GI P++ +
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTT 516
Query: 185 MVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQI 233
M++ + + G EA+ ++K+ ++P+A L AC +L +G+ I
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 117/219 (53%), Gaps = 2/219 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P +NAV+WN+++ +VQ G++ EA+ LF M GV P T+ + LS+ ++MG + G
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K++H N + + L SL+N Y K G ++ A +F M +K+VV+WN+II
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++AI M + MR L D +T L+SA + + +++G+ D+
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK-EVQCYCIRHSFESDIVL 412
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+ ++D+ + G + +A + ++ D ++W LL A
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 6/265 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ V+N SW +II + G A+ F M + + PDN + ++ +C + G
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H Y+ + + V + +SL +MY KCG L A +F +P +N V+WN ++ +
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EAI +F MR G+ P +T + LSA ++ G VE G+ + + G+ D
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAI-AIVNGMELDNIL 311
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL-LEL 240
+++ + G + A + ++ + D V W ++ G +E + + + LE
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMK 265
+YD V L+ + S + R +++K
Sbjct: 371 LKYDC---VTLATLMSAAARTENLK 392
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 4/215 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
++ S+ +S + G+ EA+ L M + IL C + DL+ GK+ H
Sbjct: 34 SSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIH 93
Query: 66 DYICDNN--ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
I N + + L+ YAKC AL+ A +F + +NV SW IIG G
Sbjct: 94 ARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGL 153
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+ A+ F +M + +FPD + AC GR G + + G+ V +
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLEDCVFVAS 212
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ D+ G+ G L +A + ++P + +AV W AL+
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDR-NAVAWNALM 246
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 150/277 (54%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ ++++ +I V+ G ++ A LF + G+ D + +IL CS + L G
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H +L++MY KCG + + +F GM +++VVSW II +
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN 522
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA F KM G+ P+++TF GLLSAC HSGL+E R M S +G+ P + H
Sbjct: 523 GRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C+VDLLG+ G EA LI K+P++PD +W +LL AC T N + I ++LL+
Sbjct: 583 YYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGF 642
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
D +Y LSN Y+ WD + K+R+ G K+
Sbjct: 643 PDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKE 679
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 114/257 (44%), Gaps = 48/257 (18%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVS-ILSSCSHMGDLAL 60
M +N V+W +++S + +G+ +A+EL+ RM S N + S +L +C +GD+ L
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGAL--------------------------- 93
G ++ I N+ V L NS+++MY K G L
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 94 ----QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGL 149
A+ +F MPQ NVVSWN +I GS + A+E +M+ GL D
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCG 244
Query: 150 LSACSHSGLVEMGRYYF------GLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI- 202
L ACS GL+ MG+ GL SS F IS ++D+ G L A +
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAIS-------ALIDMYSNCGSLIYAADVFH 297
Query: 203 -QKLPMKPDAVVWGALL 218
+KL + VW ++L
Sbjct: 298 QEKLAVNSSVAVWNSML 314
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 6/243 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N VSWN +IS V +G A+E RM G++ D L L +CS G L +G
Sbjct: 199 MPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG 257
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP---QKNVVSWNVIIGAL 118
K+ H + + + S ++L++MY+ CG+L A D+F +V WN ++
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
++ + A+ + ++ S L D T +G L C + + +G L+ + G D
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVS-GYELD 376
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ +VDL G + +A L +LP K D + + L+ C G + + ++L+
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 239 ELG 241
+LG
Sbjct: 436 KLG 438
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 49 LSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV 108
L C + G+ ++ I+ +V + N++++MY L A +F M ++N+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 109 VSWNVIIGALALHGSGKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFG 167
V+W ++ G +AIE++ +M S +E ++ +L AC G +++G +
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 168 LMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL-GACKT 223
+ + DV +VD+ + G L EA S +++ ++P + W L+ G CK
Sbjct: 132 RIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCKA 186
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 156/280 (55%), Gaps = 7/280 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ V+WN +I + + G E + L +M + P+++T V +LSSC++ +G+
Sbjct: 291 KDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTV 350
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
D + + I + L +L++MYAK G L+ A++IF M K+V SW +I HG
Sbjct: 351 ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLA 410
Query: 125 KEAIEMFEKMRASG--LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+EA+ +F KM + P+EITF +L+ACSH GLV G F M + +P V HY
Sbjct: 411 REAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHY 470
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
C+VDLLGR G L EA LI+ LP+ D+ W ALL AC+ +GN ++G+ ++ +L E+G
Sbjct: 471 GCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGE 530
Query: 243 YDSGLYVLLSNMYS-----ESQRWDDMKKIRKIMNDSGIK 277
+LL+ ++ E +++ K RK S I+
Sbjct: 531 THPADAILLAGTHAVAGNPEKSLDNELNKGRKEAGYSAIE 570
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 118/213 (55%), Gaps = 2/213 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+AV+++++++ ++Q + A A++LF M S V+ + +TL+S LS+ S +GDL+ + AH
Sbjct: 191 DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAH 250
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ + + L +L+ MY K G + +A IF +K+VV+WN +I A G +
Sbjct: 251 VLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLE 310
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
E + + +M+ + P+ TF GLLS+C++S +GR L+ I+ D +
Sbjct: 311 ECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEE-RIALDAILGTAL 369
Query: 186 VDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
VD+ + G L +A+ + ++ K D W A++
Sbjct: 370 VDMYAKVGLLEKAVEIFNRMKDK-DVKSWTAMI 401
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 37/315 (11%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +N++I + + A +F ++ G+ D + ++ L SCS +++G+ H
Sbjct: 89 NLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLH 148
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALALHGSG 124
+ V L N+L++ Y CG + A +F MPQ + V+++ ++
Sbjct: 149 GIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKK 208
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMG--------RYY 165
A+++F MR S + + T LSA S H +++G
Sbjct: 209 ALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITAL 268
Query: 166 FGLMSSTFGIS-----------PDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDA 211
G+ T GIS DV + CM+D + G L E + L++++ MKP++
Sbjct: 269 IGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNS 328
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELGR--YDSGLYVLLSNMYSESQRWDDMKKIRK 269
+ LL +C +G+ + LLE R D+ L L +MY++ + +I
Sbjct: 329 STFVGLLSSCAYSEAAFVGRTV-ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 270 IMNDSGIKKCRAISS 284
M D +K A+ S
Sbjct: 388 RMKDKDVKSWTAMIS 402
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 20/200 (10%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
P L++ L SC +++ + H Y+ + + L+ ++ ++ A I
Sbjct: 26 PQCQKLINDLRSCRDTVEVS---RIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSI 81
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV 159
F + N+ +N +I ++ + A +F ++RA GL D +F L +CS V
Sbjct: 82 FEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCV 141
Query: 160 EMGRYYFGL-MSSTFGISPDVA----HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
+G G+ + S F + D+ H+ C+ G + +A + ++P DAV +
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVC------GKISDARKVFDEMPQSVDAVTF 195
Query: 215 GALLGACKTFGNLEMGKQIL 234
L+ G L++ K+ L
Sbjct: 196 STLMN-----GYLQVSKKAL 210
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 166/305 (54%), Gaps = 1/305 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMP-DNATLVSILSSCSHMGDLAL 60
M ++ VSWN+IIS + Q +A+ LF M V D+ T+VS+L +CS G L +
Sbjct: 407 MNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPV 466
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H + + I + +L++MY+KCG L+ A F + K+VVSW ++I
Sbjct: 467 GKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGF 526
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG G A+E++ + SG+ P+ + F +LS+CSH+G+V+ G F M FG+ P+
Sbjct: 527 HGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHE 586
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H AC+VDLL R + +A ++ +P V G +L AC+ G E+ I + ++EL
Sbjct: 587 HLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIEL 646
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKN 300
D+G YV L + ++ +RWDD+ + M G+KK S IE++G F ++ +
Sbjct: 647 KPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTS 706
Query: 301 HEVST 305
H T
Sbjct: 707 HSDDT 711
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ V W ++I C+ + G EA L M G+ P TL+ +LS + L
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL--- 163
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ HD+ + + NS++N+Y KC + A D+F M Q+++VSWN +I A
Sbjct: 164 QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ E +++ +MR GL PD+ TF LS +EMGR + T G D+
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHL 282
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++ + + G + +++ +P K D V W ++ G E + ++L+ G
Sbjct: 283 KTALITMYLKCGKEEASYRVLETIPNK-DVVCWTVMISGLMRLGRAEKALIVFSEMLQSG 341
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 8/291 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN++IS + G +E ++L RM G+ PD T + LS M DL +G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H I V + L +L+ MY KCG + + + +P K+VV W V+I L
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL 324
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G ++A+ +F +M SG ++++C+ G ++G G + G + D
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR-HGYTLDTPA 383
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL----KQL 237
++ + + G L +++ + +++ + D V W A++ N+++ K +L +
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNER-DLVSWNAIISGYAQ--NVDLCKALLLFEEMKF 440
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
+ + DS V L S + K I I+ S I+ C + + +D
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 10/232 (4%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
+NS I+ G H + + F M + ++PD T S+L +C+ + L+ G H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
N + + +SL+N+YAK G L A +F M +++VV W +IG + G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYY-FGLMSSTFGISPDVAHYACMVDL 188
+ +MR G+ P +T +L SG++E+ + + +G D+A M++L
Sbjct: 134 LVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ +G+A L ++ + D V W ++ + GN+ +ILK L +
Sbjct: 189 YCKCDHVGDAKDLFDQMEQR-DMVSWNTMISGYASVGNMS---EILKLLYRM 236
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 170/323 (52%), Gaps = 4/323 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM--PDNATLVSILSSCSHMGDLA 59
+ KN V W ++ ++ Q +EL R ++ PD+ +VS+L +CS +
Sbjct: 352 LSEKNLVVWTAMFLGYLNLRQPDSVLEL-ARAFIANETNTPDSLVMVSVLGACSLQAYME 410
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
GK+ H + I + L + ++MY+KCG ++ A IF +++ V +N +I A
Sbjct: 411 PGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCA 470
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG ++ + FE M G PDEITF LLSAC H GLV G YF M + ISP+
Sbjct: 471 HHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPET 530
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKL-PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY CM+DL G+ L +A+ L++ + ++ DAV+ GA L AC N E+ K++ ++LL
Sbjct: 531 GHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLL 590
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
+ + Y+ ++N Y+ S RWD+M++IR M ++ S ID + F D
Sbjct: 591 VIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSD 650
Query: 299 KNHEVSTSIYSMVDQLMDHLKSV 321
+H + +IY+M+ + L +
Sbjct: 651 ISHYETEAIYAMLHFVTKDLSEI 673
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
+ + +SWN++I+ + Q G EA+++ M +G+ D + ++L+ S + L +GK
Sbjct: 221 ELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGK 280
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H + N + + + ++++Y KCG ++ A N+ S + +I + G
Sbjct: 281 EVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQG 340
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
EA +F+ + L F G L+ ++E+ R + ++T
Sbjct: 341 KMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNT---------- 390
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG- 241
PD++V ++LGAC +E GK+I L G
Sbjct: 391 --------------------------PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI 424
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQ 293
D L +MYS+ + ++I DS ++ + + I GC +
Sbjct: 425 LMDKKLVTAFVDMYSKCGNVEYAERIF----DSSFERDTVMYNAMIAGCAHH 472
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 74 TVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEK 133
T++ N L+N+Y+K G L+ A ++F M ++NV SWN +I A + KEA E+FE
Sbjct: 20 TLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFE- 78
Query: 134 MRASGLFPDEITFTGLLS 151
+ D IT+ LLS
Sbjct: 79 --SDNCERDLITYNTLLS 94
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 130/221 (58%), Gaps = 2/221 (0%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSWN I+ + H E +ELF M S + PD T VSILS CS + DL LG H
Sbjct: 509 DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 66 DYICDNNITVSVT-LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
I + + + T +CN L++MY KCG++++ M +F +KN+++W +I L +HG G
Sbjct: 569 GLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYG 628
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+EA+E F++ + G PD ++F +L+AC H G+V+ G F M +G+ P++ HY C
Sbjct: 629 QEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRC 687
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
VDLL R G+L EA LI+++P DA VW L C F
Sbjct: 688 AVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFA 728
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 114/261 (43%), Gaps = 29/261 (11%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ VSWN+II + +A++LF M G P+ T VS+L S + L+ G++ H
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIH 339
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ N + L N+L++ YAKCG L+ + F + KN+V WN ++ A + G
Sbjct: 340 GMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGP 398
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACS-------HSGLVEMG------------RYYF 166
+ +F +M G P E TF+ L +C HS +V MG R Y
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 167 -------GLMSSTFGISP-DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
L+ + P V + + R G E++ LI L +PD V W +
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAI 517
Query: 219 GACKTFGNLEMGKQILKQLLE 239
AC E ++ K +L+
Sbjct: 518 AACSRSDYHEEVIELFKHMLQ 538
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 30/265 (11%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCS-------HMGD 57
KN V WN+++S + + + LF +M G P T + L SC H
Sbjct: 380 KNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVI 438
Query: 58 LALGKKAHDYICDNNIT---------------------VSVTLCNSLMNMYAKCGALQTA 96
+ +G + +DY+ + + SV N + +Y++ G +
Sbjct: 439 VRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHES 498
Query: 97 MDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
+ + + Q + VSWN+ I A + +E IE+F+ M S + PD+ TF +LS CS
Sbjct: 499 VKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKL 558
Query: 157 GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
+ +G GL++ T D ++D+ G+ G + M + ++ K + + W A
Sbjct: 559 CDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREK-NLITWTA 617
Query: 217 LLGACKTFGNLEMGKQILKQLLELG 241
L+ G + + K+ L LG
Sbjct: 618 LISCLGIHGYGQEALEKFKETLSLG 642
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ +WN ++S G E M F + G ++ + +L S + DL +
Sbjct: 175 MPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDIS 234
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H + +++ NSL++ Y KCG A +F ++VSWN II A A
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ +A+++F M G P++ T+ +L S L+ GR G++ G +
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVL 353
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
++D + G L ++ + K + V W ALL
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDYIRDK-NIVCWNALL 389
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Query: 42 NATLVSILSSCSHMGDLALGKKAHDY---ICDNNITVSVTLCNSLMNMYAKCGALQTAMD 98
N +VS+L+ C A K H +C + + V +CN+++++Y K G + A
Sbjct: 12 NDRVVSLLNVCRKAPSFARTKALHALSITLC-SVLLQPVYVCNNIISLYEKLGEVSLAGK 70
Query: 99 IFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
+F MP++N VS+N II + +G +A +F +MR G P++ T +GLLS S
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD-- 128
Query: 159 VEMGRYYFGLMSSTFGI-SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGAL 217
V G GL S +G+ D C++ L GR L A + + +P K W +
Sbjct: 129 VRAGTQLHGL-SLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK-SLETWNHM 186
Query: 218 LGACKTFGNLEMGKQILKQLLELG 241
+ G L+ ++L+ +G
Sbjct: 187 MSLLGHRGFLKECMFFFRELVRMG 210
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VS+N+II + + G +A +F M G +P+ +T VS L SC+ + D+ G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST-VSGLLSCASL-DVRAG 132
Query: 62 KKAHDYICDNNITVSVTLCNS-LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ H + ++ + L+ +Y + L+ A +F MP K++ +WN ++ L
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGH 192
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
G KE + F ++ G E +F G+L S
Sbjct: 193 RGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
KN ++W ++ISC G EA+E F G PD + +SIL++C H G + G
Sbjct: 610 KNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGL 669
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP 104
+ D + + +++ A+ G L+ A + MP
Sbjct: 670 FQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 145/268 (54%), Gaps = 1/268 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V+N VSWN++I Q G+ EAM LF +M + + PD T S+LSSC+ +
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ + +++ NSL++ Y++ G L A+ F + + ++VSW +IGALA H
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +E+++MFE M L PD+ITF +LSACSH GLV+ G F M+ + I + H
Sbjct: 422 GFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEH 480
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y C++DLLGR GF+ EA ++ +P +P A G C E K K+LLE+
Sbjct: 481 YTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIE 540
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRK 269
Y +LSN Y W+ +RK
Sbjct: 541 PTKPVNYSILSNAYVSEGHWNQAALLRK 568
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 10/238 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLALGK 62
++ V WN+++S +V G EA L M + D T S+LS+C + GK
Sbjct: 206 RDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGK 261
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H + + + + +L+NMYAK L A + F M +NVVSWN +I A +G
Sbjct: 262 QIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSH-SGLVEMGRYYFGLMSSTFGISPDVAH 181
G+EA+ +F +M L PDE+TF +LS+C+ S + E+ + M + G + ++
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ--VQAMVTKKGSADFLSV 379
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++ R G L EA+ + +PD V W +++GA + G E Q+ + +L+
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSI-REPDLVSWTSVIGALASHGFAEESLQMFESMLQ 436
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 44/283 (15%)
Query: 2 MPVKNAVSWNSIISCHVQ-EGQHAEAMEL-FC---RMCVSGVMPDNATLVSILSSCSHMG 56
MP++N V+WN +I +Q +G L FC R+ + V D+ + + ++ C+
Sbjct: 97 MPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDST 156
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIG 116
++ G + H + + S SL++ Y KCG + A +F + +++V WN ++
Sbjct: 157 NMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVS 216
Query: 117 ALALHGSGKEAIEMF-----EKMRASGLFPDEITFTGLLSACS-------HSGLVEMGRY 164
+ L+G EA + +K R G D TF+ LLSAC H+ L ++ Y
Sbjct: 217 SYVLNGMIDEAFGLLKLMGSDKNRFRG---DYFTFSSLLSACRIEQGKQIHAILFKVS-Y 272
Query: 165 YFGLMSSTFGIS--------------------PDVAHYACMVDLLGRGGFLGEAMSLIQK 204
F + +T ++ +V + M+ + G EAM L +
Sbjct: 273 QFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQ 332
Query: 205 L---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+ ++PD + + ++L +C F + KQ+ + + G D
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSAD 375
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 44/256 (17%)
Query: 50 SSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV 109
+S H+ D+ K+ H ++ I S+ L N L+ Y K A +F MP +N+V
Sbjct: 47 ASLDHLSDV---KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 110 SWNVII-GALALHGSGKEAIEM----FEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
+WN++I G + G + ++ + + D ++F GL+ C+ S ++ G
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL------ 218
LM G+ +V G+ G + EA + + + + D V+W AL+
Sbjct: 164 LHCLMVKQ-GLESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVLN 221
Query: 219 ---------------------GACKTFGNL------EMGKQILKQLLELG-RYDSGLYVL 250
G TF +L E GKQI L ++ ++D +
Sbjct: 222 GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATA 281
Query: 251 LSNMYSESQRWDDMKK 266
L NMY++S D ++
Sbjct: 282 LLNMYAKSNHLSDARE 297
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 166/320 (51%), Gaps = 5/320 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ V+WN II+ A+ LF ++ + PD T S+L +C+ +
Sbjct: 333 RDIVAWNGIITAFAVYDPE-RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSI 391
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + L NSL++ YAKCG+L M +F M ++VVSWN ++ A +LHG
Sbjct: 392 HAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQV 451
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ +F+KM + PD TF LLSACSH+G VE G F M P + HYAC
Sbjct: 452 DSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYAC 508
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
++D+L R EA +I+++PM PDAVVW ALLG+C+ GN +GK +L EL
Sbjct: 509 VIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPT 568
Query: 245 SGL-YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEV 303
+ + Y+ +SN+Y+ +++ K M ++K +S EI ++F ++
Sbjct: 569 NSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPD 628
Query: 304 STSIYSMVDQLMDHLKSVGY 323
++Y + +L+ LK +GY
Sbjct: 629 KEAVYRELKRLISWLKEMGY 648
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 45/312 (14%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+ KN V+WNS+I+ +A+ +F RM GV D ATL++I SS DL
Sbjct: 221 IKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPN 280
Query: 62 K------KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMD---IFFGMPQ-KNVVSW 111
+ + H + + + +L+ +Y++ L+ D +F M +++V+W
Sbjct: 281 EVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAW 338
Query: 112 NVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVE 160
N II A A++ + AI +F ++R L PD TF+ +L AC+ H+ +++
Sbjct: 339 NGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIK 397
Query: 161 MGRYYFGLMSSTF-------------------GISPDVAHYACMVDLLGRGGFLGEAMSL 201
G +++++ S DV + M+ G + + +
Sbjct: 398 GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457
Query: 202 IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL--YVLLSNMYSESQ 259
QK+ + PD+ + ALL AC G +E G +I + + E L Y + +M S ++
Sbjct: 458 FQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAE 517
Query: 260 RWDDMKKIRKIM 271
R+ + +++ K M
Sbjct: 518 RFAEAEEVIKQM 529
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 11/156 (7%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N VSW ++I+ +VQ G E LF M +S P+ TL S+L+SC + G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRYEP----G 176
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKC---GALQTAMDIFFGMPQKNVVSWNVIIGAL 118
K+ H + S+ + N++++MY +C A A +F + KN+V+WN +I A
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS 154
GK+AI +F +M + G+ D T LL+ CS
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRAT---LLNICS 269
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 16/220 (7%)
Query: 18 VQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVS- 76
V+ G A+ LF V + ++ +C+ +L G H ++ + S
Sbjct: 37 VRSGDIRRAVSLFYSAPVE--LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQ 94
Query: 77 -VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR 135
V L N L+NMYAKCG + A +F MP++NVVSW +I G+ +E +F M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM- 153
Query: 136 ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR---G 192
S FP+E T + +L++C + E G+ GL + G+ + ++ + GR G
Sbjct: 154 LSHCFPNEFTLSSVLTSCRY----EPGKQVHGL-ALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 193 GFLGEAMSLIQKLPMKPDAVVWGALLGA--CKTFGNLEMG 230
EA ++ + + K + V W +++ A C G +G
Sbjct: 209 AAAYEAWTVFEAIKFK-NLVTWNSMIAAFQCCNLGKKAIG 247
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 158/283 (55%), Gaps = 4/283 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N SWN +IS Q E +LF + + P+ T V +LS+ + +G + G +AH
Sbjct: 646 NLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
++ + + +L++MY+ CG L+T M +F ++ +WN +I A HG G+
Sbjct: 703 CHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGE 762
Query: 126 EAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+A+E+F+++ + S + P++ +F LLSACSHSG ++ G Y+ M FG+ P H
Sbjct: 763 KAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVW 822
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
+VD+LGR G L EA I + A VWGALL AC G+ ++GK++ + L E+ +
Sbjct: 823 IVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDN 882
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
+ Y+ L+N Y W++ ++RK++ D+ +KK S I++
Sbjct: 883 ASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 120/239 (50%), Gaps = 8/239 (3%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLA 59
M ++ SWNS+IS G H E++ F M G + D TL+ +S+ ++G +
Sbjct: 539 MSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVL 598
Query: 60 LGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G+ H + + L N+L+ MY +C +++A+ +F + N+ SWN +I AL+
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 658
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGISPD 178
+ +G+E ++F ++ L P+EITF GLLSA + G G + + L+ F +P
Sbjct: 659 QNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPF 715
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
V+ A +VD+ G L M + + + + W +++ A G E ++ K+L
Sbjct: 716 VS--AALVDMYSSCGMLETGMKVFRNSGVNSIS-AWNSVISAHGFHGMGEKAMELFKEL 771
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 115/240 (47%), Gaps = 4/240 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN+I++ + G ++++ F M SG D T ++S+CS + +L LG
Sbjct: 249 MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLG 308
Query: 62 KKAHDYICDNNIT--VSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
+ H + + + V++ NS+++MY+KCG + A +F + ++V+S N I+ A
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFA 368
Query: 120 LHGSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
+G +EA + +M++ + PD T + S C GR G S
Sbjct: 369 ANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRA 428
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ ++D+ G+ G +A L+ K D V W +++ A G K + K+++
Sbjct: 429 LEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV 487
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 6/251 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ + WNS+I+ Q G++ A+ LF M G D+ TL+ S+ S +
Sbjct: 151 KDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSML 210
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + +LCN+LMN+YAK L +A +F M +++VSWN I+ +G
Sbjct: 211 HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHP 270
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+++++ F+ M SG D +TF+ ++SACS + +G GL+ + G SP+ AH +
Sbjct: 271 RKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKS-GYSPE-AHVSV 328
Query: 185 ---MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
++ + + G A ++ ++L + D + A+L G E IL Q+ +
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEELVCR-DVISSNAILNGFAANGMFEEAFGILNQMQSVD 387
Query: 242 RYDSGLYVLLS 252
+ + ++S
Sbjct: 388 KIQPDIATVVS 398
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 59/317 (18%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDN---ATLVSILSSCSHMGDLALG 61
++ VSWNS+IS Q G +A LF + VS +T+++IL+SC L G
Sbjct: 458 RDLVSWNSMISAFSQNGFTHKAKNLF-KEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVIIGALAL 120
K H ++ K G L +A M + +++ SWN +I A
Sbjct: 517 KSVHCWL-------------------QKLGDLTSAFLRLETMSETRDLTSWNSVISGCAS 557
Query: 121 HGSGKEAIEMFEKMRASG-LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST------- 172
G E++ F+ M G + D IT G +SA + GLV GR + GL +
Sbjct: 558 SGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQ 617
Query: 173 ---------------------FGI--SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKP 209
FG+ P++ + C++ L + E L + L ++P
Sbjct: 618 LQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEP 677
Query: 210 DAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIR 268
+ + + LL A G+ G Q L+ G + + + L +MYS ++
Sbjct: 678 NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGM---LETGM 734
Query: 269 KIMNDSGIKKCRAISSI 285
K+ +SG+ A +S+
Sbjct: 735 KVFRNSGVNSISAWNSV 751
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVM-PDNATLVSILSSCSHMGDLALGK 62
V + +WNS+IS H G +AMELF + + M P+ ++ +S+LS+CSH G + G
Sbjct: 742 VNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGL 801
Query: 63 KAHDYICDNNITVSVTLCNS-LMNMYAKCGALQTAMDIFFGM--PQKNVVSWNVIIGALA 119
+ + + VT +++M + G L+ A + G+ PQK V W ++ A
Sbjct: 802 SYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGV-WGALLSACN 860
Query: 120 LHGS---GKEAIEMFEKMRASGLFPDEITF 146
HG GKE E+ +M PD ++
Sbjct: 861 YHGDTKLGKEVAEVLFEME-----PDNASY 885
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 160/288 (55%), Gaps = 3/288 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDL 58
+M K+ + ++++I+C+ Q G+ +A++LF +M S + PD TL S++S+ S +G+
Sbjct: 288 LMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNT 347
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
+ G YI ++ I + L SL+++Y K G A +F + +K+ VS++ +I
Sbjct: 348 SFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGC 407
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
++G EA +F M + P+ +TFTGLLSA SHSGLV+ G F M + P
Sbjct: 408 GINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPS 466
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY MVD+LGR G L EA LI+ +PM+P+A VWGALL A N+E G+ +
Sbjct: 467 ADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCV 526
Query: 239 ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
+L +G L+ +YS RWDD + +R + + + K S +E
Sbjct: 527 KLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 12/240 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+AVSWN IIS + ++G A LF M + N L+ +C M L
Sbjct: 196 IPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWN-ILIGGYVNCREM---KLA 251
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ D + N +T+ + Y K G +Q+A ++F M +K+ + ++ +I +
Sbjct: 252 RTYFDAMPQKNGVSWITMISG----YTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 122 GSGKEAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G K+A+++F +M R S + PDEIT + ++SA S G G + ++ GI D
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE-HGIKIDD 366
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++DL +GG +A + L K D V + A++ C G + ++E
Sbjct: 367 LLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 131/317 (41%), Gaps = 44/317 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
++ SW ++ Q + E ++++ M SG+ P + + S+L +C M ++ GK H
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
N + V + L+ +Y++ G ++ A F + +KN VSWN ++ G
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSG---------------------------- 157
EA +F+K+ D +++ ++S+ + G
Sbjct: 188 EARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 158 ---LVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVW 214
+++ R YF M G+S + M+ + G + A L +L K D +V+
Sbjct: 244 NCREMKLARTYFDAMPQKNGVS-----WITMISGYTKLGDVQSAEELF-RLMSKKDKLVY 297
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMK---KIRKIM 271
A++ G + ++ Q+LE Y + LS++ S + + + + +
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 272 NDSGIKKCRAISSIEID 288
+ GIK +S+ ID
Sbjct: 358 TEHGIKIDDLLSTSLID 374
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 178/317 (56%), Gaps = 8/317 (2%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ VS +++IS G+ EA+ +FC M + P+ T++S+L++CS DL
Sbjct: 389 MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTS 445
Query: 62 KKAHDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K AH ++ ++ +++ S+++ YAKCGA++ A F + +KN++SW VII A A+
Sbjct: 446 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 505
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G +A+ +F++M+ G P+ +T+ LSAC+H GLV+ G F M P +
Sbjct: 506 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQ 564
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLP--MKPDAVVWGALLGACKT-FGNLEMGKQILKQL 237
HY+C+VD+L R G + A+ LI+ LP +K A WGA+L C+ F L + +++ ++
Sbjct: 565 HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEV 624
Query: 238 LELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
LEL S Y+L S+ ++ + W+D+ +R+++ + ++ S + +F+
Sbjct: 625 LELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAG 684
Query: 298 DKNHEVSTSIYSMVDQL 314
DK + + + +V L
Sbjct: 685 DKLSQSDSELNDVVQSL 701
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 32/262 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
M ++ +SW+ +I +VQ + ++LF M + PD T+ S+L +C+ M D+ +
Sbjct: 185 MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDV 244
Query: 61 GKKAHDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALA 119
G+ H + ++ V +CNSL++MY+K + +A +F +N+VSWN I+
Sbjct: 245 GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV 304
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMGRYYFGL 168
+ EA+EMF M + DE+T LL C H ++ G +
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 169 MSSTF-------------------GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKP 209
S+ DV + M+ L G EA+S+ + P
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP 424
Query: 210 DAVVWGALLGACKTFGNLEMGK 231
+A+ +LL AC +L K
Sbjct: 425 NAITVISLLNACSVSADLRTSK 446
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 114/274 (41%), Gaps = 47/274 (17%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N VSWNSI++ V ++ EA+E+F M V D T+VS+L C K
Sbjct: 291 RNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSI 350
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I + +SL++ Y C + A + M K+VVS + +I LA G
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHS---------------------------- 156
EAI +F MR + P+ IT LL+ACS S
Sbjct: 411 DEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS 467
Query: 157 --------GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK 208
G +EM R F ++ ++ + ++ G +A++L ++ K
Sbjct: 468 IVDAYAKCGAIEMARRTFDQIT-----EKNIISWTVIISAYAINGLPDKALALFDEMKQK 522
Query: 209 ---PDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
P+AV + A L AC G ++ G I K ++E
Sbjct: 523 GYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE 556
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%), Gaps = 7/220 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +++VSWN I+ + G E + F ++ V G P+ +TLV ++ +C + G
Sbjct: 87 MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDG 144
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+K H Y+ + ++ NS++ MYA +L +A +F M +++V+SW+V+I +
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 122 GSGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDV 179
+++F++M + PD +T T +L AC+ +++GR G + F ++ DV
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA-DV 262
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
++D+ +G + A + + + + V W ++L
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWNSILA 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
NS+ + Y KCG L + + F M ++ VSWNVI+ L +G +E + F K+R G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 141 PDEITFTGLLSAC 153
P+ T ++ AC
Sbjct: 125 PNTSTLVLVIHAC 137
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 158/281 (56%), Gaps = 14/281 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V NS+IS ++ + EA L R P+ L S L+ CS DL +GK+ H
Sbjct: 250 DEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIH 304
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
N LCN LM+MY KCG + A IF +P K+VVSW +I A A++G G
Sbjct: 305 CVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGV 364
Query: 126 EAIEMFEKM--RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
+A+E+F +M SG+ P+ +TF ++SAC+H+GLV+ G+ FG+M + + P HY
Sbjct: 365 KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV 424
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPD-----AVVWGALLGACKTFGNLEMGKQILKQLL 238
C +D+L + G E L++++ M+ D +W A+L AC +L G+ + ++L+
Sbjct: 425 CFIDILSKAGETEEIWRLVERM-MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLM 483
Query: 239 -ELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
E G ++ +YVL+SN Y+ +WD ++++R + + G+ K
Sbjct: 484 EETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVK 524
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Query: 19 QEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVT 78
+ G + + LF ++ + + T +L +CS + G++ H +
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 79 LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG 138
+L++MY+K G L ++ +F + +K++VSWN ++ +G GKEA+ +F M
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD-VAHYACMVDLLGRGGFLGE 197
+ E T + ++ C+ +++ G+ ++ T D V M+ G + E
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT---GRDLVVLGTAMISFYSSVGLINE 237
Query: 198 AMSLIQKLPMKPDAVVWGALLGAC 221
AM + L + D V+ +L+ C
Sbjct: 238 AMKVYNSLNVHTDEVMLNSLISGC 261
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCV--SGVMPDNATLVSILSSCSHMGDLA 59
+P K+ VSW S+I + G +A+E+F MC SGV+P++ T + ++S+C+H G +
Sbjct: 342 IPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVK 401
Query: 60 LGKK 63
GK+
Sbjct: 402 EGKE 405
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 156/283 (55%), Gaps = 13/283 (4%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ VSWN +++ ++ GQ EA+ F +M V P+ T V+I+ + + + L +G
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSV 626
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + + NSL++MYAKCG ++++ F + K +VSWN ++ A A HG
Sbjct: 627 HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLA 686
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
A+ +F M+ + L PD ++F +LSAC H+GLVE G+ F M I +V HYAC
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYAC 746
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MVDLLG+ G GEA+ +++++ +K VWGALL + + NL + L QL++L
Sbjct: 747 MVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP-- 804
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
L + YS+ +R + ++ N S IKK A S IE+
Sbjct: 805 -----LNPSHYSQDRR------LGEVNNVSRIKKVPACSWIEV 836
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 140/278 (50%), Gaps = 34/278 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P+K+AV++N++ + Q G +A +++ M + GV PD+ T+V +L +C+ D A G
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALAL 120
+ I + + ++L+NM+ KC AL A+ +F +K+ VSWN+++ L
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-----------HSGLVEMG------- 162
HG +EA+ F +M+ P+ +TF ++ A + HS L++ G
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPV 641
Query: 163 -------RYYFGLMSSTFGISPDVAH-----YACMVDLLGRGGFLGEAMSL---IQKLPM 207
G++ S+ ++++ + M+ G A+SL +Q+ +
Sbjct: 642 GNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENEL 701
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS 245
KPD+V + ++L AC+ G +E GK+I +++ E + ++
Sbjct: 702 KPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEA 739
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ VSW+++I+ + Q GQH EA+ LF M + P+ TL S+L C+ + LGK
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y +I + ++++MYAKCG A+ F +P K+ V++N + G
Sbjct: 424 HCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDA 483
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYA 183
+A ++++ M+ G+ PD T G+L C+ G +G ++ F VAH
Sbjct: 484 NKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH-- 541
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++++ + L A+ L K + V W ++ G E +Q+
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 6/235 (2%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
K+ SW ++++ + G E +ELF M V + S L + +++GDL G
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI 322
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
HDY + V++ SLM+MY+KCG L+ A +F + ++VVSW+ +I + G
Sbjct: 323 HDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQH 382
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR--YYFGLMSSTFGISPDVAHY 182
EAI +F M + P+ +T T +L C+ +G+ + + + + I ++
Sbjct: 383 DEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD---IESELETA 439
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ + + G A+ ++LP+K DAV + AL G+ + K +
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIK-DAVAFNALAQGYTQIGDANKAFDVYKNM 493
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 8/238 (3%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKKAHD 66
V WNS+I + + G H EA+ F M G+ PD + L +C+ D G + HD
Sbjct: 65 VLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD 124
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKE 126
I + + V + +L+ MY K L +A +F M K+VV+WN ++ LA +G
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
A+ +F MR+ + D ++ L+ A S ++ R GL+ I A + ++
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI---FAFSSGLI 241
Query: 187 DLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
D+ L A S+ +++ + D WG ++ A G E ++L+ + YD
Sbjct: 242 DMYCNCADLYAAESVFEEV-WRKDESSWGTMMAAYAHNGFFE---EVLELFDLMRNYD 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 45/270 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M VK+ V+WN+++S Q G + A+ LF M V D+ +L +++ + S + +
Sbjct: 161 MHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVC 220
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + + + L++MY C L A +F + +K+ SW ++ A A +
Sbjct: 221 RCLHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHN 278
Query: 122 GSGKEAIEMFEKMR-----------------------------------ASGLFPDEITF 146
G +E +E+F+ MR GL D
Sbjct: 279 GFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVA 338
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ--- 203
T L+S S G +E+ F + DV ++ M+ + G EA+SL +
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDR-----DVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 204 KLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
++ +KP+AV ++L C +GK I
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSI 423
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 162/317 (51%), Gaps = 38/317 (11%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNAT------------------- 44
+N +SWNS+IS + GQH A+ELF ++ G+ PD+AT
Sbjct: 295 TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFK 354
Query: 45 ----------------LVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYA 88
L S+LS+CS + L GK+ H ++ + + SL++MY
Sbjct: 355 FFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYM 414
Query: 89 KCGALQTAMDIF--FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
KCG A IF F K+ V WNV+I HG + AIE+FE +R + P TF
Sbjct: 415 KCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATF 474
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP 206
T +LSACSH G VE G F LM +G P H CM+DLLGR G L EA +I ++
Sbjct: 475 TAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMS 534
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLSNMYSESQRWDDMKK 266
+V +LLG+C+ + +G++ +L EL + +V+LS++Y+ +RW+D++
Sbjct: 535 EPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVES 593
Query: 267 IRKIMNDSGIKKCRAIS 283
IR++++ + K +S
Sbjct: 594 IRQVIDQKQLVKLPGLS 610
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 8/259 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + S N+ +S ++ G +A +F VSG ++ T+ S+L C GD+ G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGG 148
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + + V + SL++MY++CG A +F +P K+VV++N I L +
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 122 GSGKEAIEMFEKMRA-SGLFPDEITFTGLLSACSHSGLVEMGRYYFGL-MSSTFGISPDV 179
G +F MR S P+++TF ++AC+ ++ GR GL M F V
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D+ + A + +L + + W +++ G E ++ ++L
Sbjct: 269 G--TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 240 LG-RYDSGLYVLLSNMYSE 257
G + DS + L + +S+
Sbjct: 327 EGLKPDSATWNSLISGFSQ 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 124/311 (39%), Gaps = 52/311 (16%)
Query: 40 PDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDI 99
P+ T +L SC+ +GD+ G+ H + V V +L++MY K + A+ +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 100 FFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLV 159
MP++ + S N + L +G ++A MF R SG + +T +L C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 160 EMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK----------- 208
E G L + G +V +V + R G A + +K+P K
Sbjct: 146 EGGMQLHCLAMKS-GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 209 ------------------------PDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RY 243
P+ V + + AC + NL+ G+Q+ +++ ++
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 244 DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSG--IKKCRAISSIEIDGCCYQFMVDDKNH 301
++ + L +MYS+ + W + + D+ I IS + I+G H
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING----------QH 314
Query: 302 EVSTSIYSMVD 312
E + ++ +D
Sbjct: 315 ETAVELFEKLD 325
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 166/312 (53%), Gaps = 8/312 (2%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+WNSIIS + E L M +SG P++ TL SIL + +G+L GK+ H YI
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 69 CD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + L NSL++MYAK G + A +F M +++ V++ +I G G+ A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+ F+ M SG+ PD +T +LSACSHS LV G + F M FGI + HY+CMVD
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL-KQLLELGRYDSG 246
L R G+L +A + +P +P + + LL AC GN +G+ K LLE G
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 247 LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI----EIDGCCYQFMVDDK--N 300
Y+LL++MY+ + W + ++ +++D G++K + + E+DG + M DD N
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELDGENNKPMNDDSVIN 689
Query: 301 HEVSTSIYSMVD 312
E S+ +V+
Sbjct: 690 QEQSSDEERLVE 701
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 81/154 (52%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ + + WN +I +++ + E++ ++ RM G+ D T S++ +C+ + D A G+
Sbjct: 146 ILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H I ++ ++ +CN+L++MY + G + A +F M +++ VSWN II
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
EA ++ ++M SG+ +T+ + C +G
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 43/279 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSI------------- 48
M ++AVSWN+II+C+ E + EA +L RM +SGV T +I
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGA 304
Query: 49 ----------------------LSSCSHMGDLALGKKAHDYI---CDNNITVSVTLCNSL 83
L +CSH+G L GK H + C + + + NSL
Sbjct: 305 LNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSL 363
Query: 84 MNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDE 143
+ MY++C L+ A +F + ++ +WN II A + +E + ++M SG P+
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 144 ITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ 203
IT +L + G ++ G+ + + + + +VD+ + G + A +
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 204 KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
+ K D V + +L+ +G L G+ L ++ R
Sbjct: 484 SM-RKRDKVTYTSLIDG---YGRLGKGEVALAWFKDMDR 518
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 15/219 (6%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSG-----VMPDNATLVSILSSCSHMGDLALGK 62
V +NS C + GQ EA F + V+ +A+L LS+C + G+
Sbjct: 48 VLFNSFRHC-ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASL---LSTCVGFNEFVPGQ 103
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H + + + L L+ Y+ L A I + + WNV+IG+ +
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNK 163
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+E++ ++++M + G+ DE T+ ++ AC+ GR G + + S Y
Sbjct: 164 RFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVS---SHRCNLY 220
Query: 183 AC--MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
C ++ + R G + A L ++ + DAV W A++
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSER-DAVSWNAIIN 258
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 166/312 (53%), Gaps = 8/312 (2%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+WNSIIS + E L M +SG P++ TL SIL + +G+L GK+ H YI
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 69 CD-NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEA 127
+ + L NSL++MYAK G + A +F M +++ V++ +I G G+ A
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Query: 128 IEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVD 187
+ F+ M SG+ PD +T +LSACSHS LV G + F M FGI + HY+CMVD
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL-KQLLELGRYDSG 246
L R G+L +A + +P +P + + LL AC GN +G+ K LLE G
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 247 LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSI----EIDGCCYQFMVDDK--N 300
Y+LL++MY+ + W + ++ +++D G++K + + E+DG + M DD N
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELDGENNKPMNDDSVIN 689
Query: 301 HEVSTSIYSMVD 312
E S+ +V+
Sbjct: 690 QEQSSDEERLVE 701
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 81/154 (52%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ + + WN +I +++ + E++ ++ RM G+ D T S++ +C+ + D A G+
Sbjct: 146 ILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H I ++ ++ +CN+L++MY + G + A +F M +++ VSWN II
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
EA ++ ++M SG+ +T+ + C +G
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 43/279 (15%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSI------------- 48
M ++AVSWN+II+C+ E + EA +L RM +SGV T +I
Sbjct: 245 MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGA 304
Query: 49 ----------------------LSSCSHMGDLALGKKAHDYI---CDNNITVSVTLCNSL 83
L +CSH+G L GK H + C + + + NSL
Sbjct: 305 LNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSL 363
Query: 84 MNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDE 143
+ MY++C L+ A +F + ++ +WN II A + +E + ++M SG P+
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 144 ITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ 203
IT +L + G ++ G+ + + + + +VD+ + G + A +
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 204 KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
+ K D V + +L+ +G L G+ L ++ R
Sbjct: 484 SM-RKRDKVTYTSLIDG---YGRLGKGEVALAWFKDMDR 518
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 15/219 (6%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSG-----VMPDNATLVSILSSCSHMGDLALGK 62
V +NS C + GQ EA F + V+ +A+L LS+C + G+
Sbjct: 48 VLFNSFRHC-ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASL---LSTCVGFNEFVPGQ 103
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
+ H + + + L L+ Y+ L A I + + WNV+IG+ +
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNK 163
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+E++ ++++M + G+ DE T+ ++ AC+ GR G + + S Y
Sbjct: 164 RFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVS---SHRCNLY 220
Query: 183 AC--MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLG 219
C ++ + R G + A L ++ + DAV W A++
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSER-DAVSWNAIIN 258
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 167/297 (56%), Gaps = 4/297 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N+ SWN+I++ +V + EA E F +M SGV D +L +L++ + + + G
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG 339
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
H + V + ++L++MY+KCG L+ A +F+ MP+KN++ WN +I A +
Sbjct: 340 SLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARN 399
Query: 122 GSGKEAIEMFEKMRASGLF-PDEITFTGLLSACSHSGL-VEMGRYYFGLMSSTFGISPDV 179
G EAI++F +++ PD TF LL+ CSH + +E+ YF +M + + I P V
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSV 459
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
H ++ +G+ G + +A +IQ+ D V W ALLGAC +L+ K + +++E
Sbjct: 460 EHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
Query: 240 LGRYDSG--LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQF 294
LG D LY+++SN+Y+ +RW ++ +IRKIM +SG+ K S I+ C +
Sbjct: 520 LGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 2/229 (0%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
SW++I+ + G + + G PD + LV +L + G ++L ++ H Y+
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+ + L NSLM Y +L+ A +F MP +V+SWN ++ G +E I
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+F ++ S +FP+E +FT L+AC+ L +G + +V C++D+
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 189 LGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
G+ GF+ +A+ + Q + K D V W A++ +C G LE+G Q+
Sbjct: 202 YGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP + +SWNS++S +VQ G+ E + LF + S V P+ + + L++C+ + LG
Sbjct: 116 MPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLG 175
Query: 62 KKAHDYICDNNITV-SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
H + + +V + N L++MY KCG + A+ +F M +K+ VSWN I+ + +
Sbjct: 176 ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSR 235
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+G + + F +M PD +T+ L+ A SG
Sbjct: 236 NGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSG 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 36/212 (16%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D + +I++SCS G L LG + N TV+ N L++ + K G A +
Sbjct: 222 DTVSWNAIVASCSRNGKLELGLWFFHQM-PNPDTVTY---NELIDAFVKSGDFNNAFQVL 277
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFT------------- 147
MP N SWN I+ EA E F KM +SG+ DE + +
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 148 --GLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL 205
L+ AC+H G+ V + ++D+ + G L A + +
Sbjct: 338 WGSLIHACAHK----------------LGLDSRVVVASALIDMYSKCGMLKHAELMFWTM 381
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
P K + +VW ++ G+ ++ QL
Sbjct: 382 PRK-NLIVWNEMISGYARNGDSIEAIKLFNQL 412
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 166/321 (51%), Gaps = 4/321 (1%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+M ++ V W +I H + G A++ F M D +L S++ +CS M L
Sbjct: 462 VMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQ 521
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G+ H +++C +L++MY K G +TA IF ++ WN ++GA +
Sbjct: 522 GEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQ 581
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
HG ++A+ FE++ +G PD +T+ LL+ACSH G G++ + M GI
Sbjct: 582 HGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFK 640
Query: 181 HYACMVDLLGRGGFLGEAMSLI-QKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
HY+CMV+L+ + G + EA+ LI Q P A +W LL AC NL++G +Q+L+
Sbjct: 641 HYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILK 700
Query: 240 LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMV--D 297
L D+ ++LLSN+Y+ + RW+D+ ++R+ + K +S IE++ Q D
Sbjct: 701 LDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGD 760
Query: 298 DKNHEVSTSIYSMVDQLMDHL 318
N EV + +++L ++
Sbjct: 761 QSNPEVVSQAQDELNRLKRNM 781
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++AV+WN++I ++ + + + F M +SGV P T +L+ CS +G +LGK
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H I ++ + L N+L++MY CG ++ A +F + N+VSWN II + +G G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 125 KEAIEMFEK-MRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
++A+ M+ + +R S PDE TF+ +SA + G+ G ++ G V
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK-LGYERSVFVGT 441
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL-ELGR 242
++ + + A + + + D V+W ++ GN E+ Q ++ E R
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKER-DVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 243 YD 244
D
Sbjct: 501 SD 502
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 140/312 (44%), Gaps = 38/312 (12%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAE-AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MP +N VS+N++ S + + A A L M V P+++T S++ C+ + D+ +
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G + I + +V + S++ MY+ CG L++A IF + ++ V+WN +I
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF-------------- 166
+ ++ + F M SG+ P + T++ +L+ CS G +G+
Sbjct: 278 NDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL 337
Query: 167 -----------GLMSSTFGI-----SPDVAHYACMVDLLGRGGFLGEAMSLIQKL----P 206
G M F + +P++ + ++ GF +AM + ++L
Sbjct: 338 DNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMST 397
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGLYV--LLSNMYSESQRWDDM 264
+PD + A + A GK + Q+ +LG Y+ ++V L +MY +++ +
Sbjct: 398 PRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG-YERSVFVGTTLLSMYFKNREAESA 456
Query: 265 KKIRKIMNDSGI 276
+K+ +M + +
Sbjct: 457 QKVFDVMKERDV 468
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 3/237 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLALGKKA 64
N VSWNSIIS + G +AM ++ R+ +S PD T + +S+ + GK
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + SV + +L++MY K ++A +F M +++VV W +I + G+
Sbjct: 425 HGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNS 484
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ A++ F +M D + + ++ ACS ++ G + L T G ++
Sbjct: 485 ELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRT-GFDCVMSVCGA 543
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+VD+ G+ G E I L PD W ++LGA G +E +Q+LE G
Sbjct: 544 LVDMYGKNGKY-ETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENG 599
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 13/212 (6%)
Query: 39 MPDN---ATLVSILSSCSHMGDLALGKKAHDYICDNNI---TVSVTLCNSLMNMYAKCGA 92
MP N +++V + C + L ++ H + T S N+L++MY +CG+
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS 147
Query: 93 LQTAMDIFFGMPQKNVVSWNVIIGALALHGS-GKEAIEMFEKMRASGLFPDEITFTGLLS 151
L+ A +F MP +NVVS+N + A + + A + M + P+ TFT L+
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQ 207
Query: 152 ACSHSGLVEMGRYYFGLMSS--TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKP 209
C+ V MG L S G S +V ++ + G L A + + +
Sbjct: 208 VCAVLEDVLMGS---SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR- 263
Query: 210 DAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
DAV W ++ +E G + +L G
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 147/248 (59%), Gaps = 4/248 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP++N VSW ++I+ +V+ + EA +LF RM V V P+ T+V++L + + +G L++G
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ HDY N + L +L++MY+KCG+LQ A +F M K++ +WN +I +L +H
Sbjct: 271 RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVH 330
Query: 122 GSGKEAIEMF-EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EA+ +F E + + PD ITF G+LSAC+++G V+ G YF M +GISP
Sbjct: 331 GCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIRE 390
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
H ACM+ LL + + +A +L++ + PD + + G T G E + + +
Sbjct: 391 HNACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNETNETPSQHQIMF 447
Query: 241 GRYDSGLY 248
++D+G +
Sbjct: 448 TKWDTGRF 455
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 121/301 (40%), Gaps = 66/301 (21%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKKA 64
+ +WN +I + EA+ LF M +S D T ++ +C + LG +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGA-------------------------------L 93
H V N+LM++Y KCG L
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 94 QTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
+A +F MP +NVVSW +I A + EA ++F +M+ + P+E T LL A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 154 SHSGLVEMGRY--------------YFGL----MSSTFGISPD------------VAHYA 183
+ G + MGR+ + G M S G D +A +
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 184 CMVDLLGRGGFLGEAMSLIQKL----PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
M+ LG G EA+SL +++ ++PDA+ + +L AC GN++ G + ++++
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 240 L 240
+
Sbjct: 382 V 382
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 6/191 (3%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN 107
L +CS+ L K+ H I +N+T L L+++ + G Q A +F + +
Sbjct: 26 FLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 108 VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFP-DEITFTGLLSACSHSGLVEMGRYYF 166
+WN++I +L+++ +EA+ +F M S D+ TF ++ AC S + +G
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 167 GLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGN 226
GL G DV ++DL + G + K+P + V W +L +
Sbjct: 143 GLAIKA-GFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR-SIVSWTTMLYGLVSNSQ 200
Query: 227 LEMGKQILKQL 237
L+ + + Q+
Sbjct: 201 LDSAEIVFNQM 211
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 168/310 (54%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N +WN II+ ++Q G+ EA+ELF +M S MP++ T++S+L +C+++ + ++
Sbjct: 487 RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREI 546
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + N+ + N+L + YAK G ++ + IF GM K++++WN +IG LHGS
Sbjct: 547 HGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSY 606
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
A+ +F +M+ G+ P+ T + ++ A G V+ G+ F +++ + I P + H +
Sbjct: 607 GPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSA 666
Query: 185 MVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYD 244
MV L GR L EA+ IQ++ ++ + +W + L C+ G+++M + L L +
Sbjct: 667 MVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPEN 726
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVS 304
+ ++S +Y+ + + K D+ +KK S IE+ + F D++ +
Sbjct: 727 TATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCT 786
Query: 305 TSIYSMVDQL 314
+Y +V+++
Sbjct: 787 DVLYPLVEKM 796
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 138/270 (51%), Gaps = 5/270 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N +W+++I + +E + E +LF M GV+PD+ IL C++ GD+ G
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K H + ++ + + NS++ +YAKCG L A F M +++V++WN ++ A +
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA+E+ ++M G+ P +T+ L+ + G + M TFGI+ DV
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFT 319
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ M+ L G +A+ + +K+ + P+AV + + AC + G ++ +
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 239 ELGRYDSGLY-VLLSNMYSESQRWDDMKKI 267
++G D L L +MYS+ + +D +K+
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 117/231 (50%), Gaps = 3/231 (1%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ +W ++IS + G +A+++F +M ++GV+P+ T++S +S+CS + + G + H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
V + NSL++MY+KCG L+ A +F + K+V +WN +I G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+A E+F +M+ + L P+ IT+ ++S +G F M + + A + +
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 186 VDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQI 233
+ + G EA+ L +K+ P++V +LL AC +M ++I
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREI 546
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 9/226 (3%)
Query: 19 QEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH---DYICDNNITV 75
+ G EA + + G +T + +L SC G + LG+ H + ++ V
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFV 117
Query: 76 SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMR 135
L++MYAKCG + A +F M ++N+ +W+ +IGA + +E ++F M
Sbjct: 118 ET----KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 136 ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFL 195
G+ PD+ F +L C++ G VE G+ ++ G+S + ++ + + G L
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK-LGMSSCLRVSNSILAVYAKCGEL 232
Query: 196 GEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
A +++ + D + W ++L A G E +++K++ + G
Sbjct: 233 DFATKFFRRMRER-DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ ++WNS+I +V G + A+ LF +M G+ P+ TL SI+ + MG++ G
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
KK I D +I ++ C++++ +Y + L+ A+ M Q W +
Sbjct: 645 KKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCR 704
Query: 120 LHGSGKEAIEMFEKM 134
+HG AI E +
Sbjct: 705 IHGDIDMAIHAAENL 719
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 153/275 (55%), Gaps = 4/275 (1%)
Query: 5 KNAVSWNSIISCHVQEGQ-HAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
++ +S ++I+ Q+ ++A ++F M D + S+L C+ + + +G++
Sbjct: 278 RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQ 337
Query: 64 AHDY-ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H + + + I V L NSL++MYAK G ++ A+ F M +K+V SW +I HG
Sbjct: 338 IHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHG 397
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+ ++AI+++ +M + P+++TF LLSACSH+G E+G + M + GI H
Sbjct: 398 NFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHL 457
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLP--MKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+C++D+L R G+L EA +LI+ + + WGA L AC+ GN+++ K QLL +
Sbjct: 458 SCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSM 517
Query: 241 GRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSG 275
Y+ L+++Y+ + WD+ RK+M +SG
Sbjct: 518 EPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 127/296 (42%), Gaps = 38/296 (12%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ VSW ++IS + G H +A+ LF M V + T S+L SC +G L G +
Sbjct: 76 RDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQI 135
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H + N ++ + ++L+++YA+CG ++ A F M ++++VSWN +I +
Sbjct: 136 HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACA 195
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
+ +F+ M G PD TF LL A +E+ GL + G A
Sbjct: 196 DTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGL-AIKLGFGRSSALIRS 254
Query: 185 MVDLLGRGGFLGEAMSLIQ-----------------------------------KLPMKP 209
+V+ + G L A L + ++ K
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 210 DAVVWGALLGACKTFGNLEMGKQILKQLLELG--RYDSGLYVLLSNMYSESQRWDD 263
D VV ++L C T ++ +G+QI L+ R+D L L +MY++S +D
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIED 370
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 2/228 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN++I + + LF M G PD T S+L + + L +
Sbjct: 174 MKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV 233
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H S L SL+N Y KCG+L A + G +++++S +I +
Sbjct: 234 SELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Query: 122 GS-GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ +A ++F+ M DE+ + +L C+ V +GR G + I DVA
Sbjct: 294 NNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA 353
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
++D+ + G + +A+ +++ K D W +L+ GN E
Sbjct: 354 LGNSLIDMYAKSGEIEDAVLAFEEMKEK-DVRSWTSLIAGYGRHGNFE 400
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M K+ SW S+I+ + + G +A++L+ RM + P++ T +S+LS+CSH G LG
Sbjct: 378 MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Query: 62 KKAHDYICDNN-ITVSVTLCNSLMNMYAKCGALQTAMDIFF---GMPQKNVVSWNVIIGA 117
K +D + + + I + +++M A+ G L+ A + G+ + +W + A
Sbjct: 438 WKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDA 497
Query: 118 LALHGS 123
HG+
Sbjct: 498 CRRHGN 503
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 156/316 (49%), Gaps = 3/316 (0%)
Query: 11 NSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYIC 69
SII + + G +A+ LF R +C + D +L IL+ C +G +G + H Y
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYAL 548
Query: 70 DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIE 129
++L NSL++MYAKC A+ IF M + +V+SWN +I L +G EA+
Sbjct: 549 KAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALA 608
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSGLVEMG--RYYFGLMSSTFGISPDVAHYACMVD 187
++ +M + PD IT T ++SA ++ ++ R F M + + I P HY V
Sbjct: 609 LWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVR 668
Query: 188 LLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL 247
+LG G L EA I +P++P+ V ALL +C+ N + K++ K +L
Sbjct: 669 VLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSE 728
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNHEVSTSI 307
Y+L SN+YS S W + IR+ M + G +K A S I + + F D +H I
Sbjct: 729 YILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDI 788
Query: 308 YSMVDQLMDHLKSVGY 323
Y ++ L+ VGY
Sbjct: 789 YRGLEILIMECLKVGY 804
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKKA 64
VS+ ++IS + EA+++F RM +G V P+ T V+IL++C + +LG +
Sbjct: 144 TVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQI 203
Query: 65 HDYICDNNITVSVTLCNSLMNMYAK--CGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H I + SV + NSLM++Y K + + +F +PQ++V SWN ++ +L G
Sbjct: 204 HGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEG 263
Query: 123 SGKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+A ++F +M R G D T + LLS+C+ S ++ GR G + G+ +++
Sbjct: 264 KSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG-RAIRIGLMQELSV 322
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++ + + + SL + + M DAV + ++ A +FG ++ +I + E
Sbjct: 323 NNALIGFYSKFWDMKKVESLYEMM-MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 140/347 (40%), Gaps = 75/347 (21%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMC-VSGVMPDNATLVSILSSCSHMGDLAL 60
+P ++ SWN+++S V+EG+ +A +LF M V G D+ TL ++LSSC+ L
Sbjct: 244 IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLR 303
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAK------------------------------- 89
G++ H + +++ N+L+ Y+K
Sbjct: 304 GRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMS 363
Query: 90 CGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGL 149
G + +A++IF + +KN +++N ++ +G G +A+++F M G+ + + T
Sbjct: 364 FGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSA 423
Query: 150 LSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL--------------------- 188
+ AC ++ G FG + + ++D+
Sbjct: 424 VDACGLVSEKKVSEQIHGF-CIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 189 ------------LGRGGFLGEAMSLI------QKLPMKPDAVVWGALLGACKTFGNLEMG 230
R G +A+SL QKL + D V +L C T G EMG
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFL--DEVSLTLILAVCGTLGFREMG 540
Query: 231 KQILKQLLELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGI 276
QI L+ G + D L L +MY++ DD KI M + +
Sbjct: 541 YQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDV 587
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 79 LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG 138
L N+L++ Y K G + A+ +F + VVS+ +I + EA+++F +MR +G
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 139 LF-PDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR--GGFL 195
L P+E TF +L+AC +G GL+ + G V ++ L + G
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS-GFLNSVFVSNSLMSLYDKDSGSSC 234
Query: 196 GEAMSLIQKLPMKPDAVVWGALLGA 220
+ + L ++P + D W ++ +
Sbjct: 235 DDVLKLFDEIPQR-DVASWNTVVSS 258
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 9/295 (3%)
Query: 10 WNSIISCHVQEGQHA------EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
W+S++ C+ G ++ +A+ LF V PD T S+LSS + + L G
Sbjct: 299 WDSVL-CNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGAD 356
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + + SLM MY K G++ AM +F K+++ WN +I LA +
Sbjct: 357 VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSR 416
Query: 124 GKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
E++ +F ++ + L PD +T G+L AC ++G V G F M G++P HY
Sbjct: 417 AVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHY 476
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGR 242
AC+++LL R G + EA + K+P +P + +W +L A G+ + + + K +LE
Sbjct: 477 ACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEP 536
Query: 243 YDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
S Y++L +Y + RW++ K+R MN+ +K + S I I+ + F D
Sbjct: 537 KSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEAD 591
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%), Gaps = 12/223 (5%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNAT---LVSILSSCSHMGDL 58
MP ++ VSWN++IS V G H + +F M + P T L S+++ H
Sbjct: 96 MPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH---- 151
Query: 59 ALGKKAH-DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
G++ H + IC ++ + NS+M+MY + G A+ +F M ++VVSWN +I +
Sbjct: 152 --GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILS 209
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+ G+ + A++ F MR + PDE T + ++S CS + G+ L +S
Sbjct: 210 CSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSN 269
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
+ A +D+ + L +++ L ++L K D+V+ +++G+
Sbjct: 270 SIVLGAG-IDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGS 310
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 121/271 (44%), Gaps = 37/271 (13%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M ++ VSWN +I G A++ F M + PD T+ ++S CS + +L+ G
Sbjct: 195 MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+A + + + ++M++KC L ++ +F + + + V N +IG+ + H
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACS----------HSGLVEMG--------- 162
G++A+ +F + PD+ TF+ +LS+ + HS ++++G
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVAT 374
Query: 163 ---RYYF---------GLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM--- 207
YF G+ + T G D+ + ++ L R E++++ +L M
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDG--KDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQS 432
Query: 208 -KPDAVVWGALLGACKTFGNLEMGKQILKQL 237
KPD V +L AC G + G QI +
Sbjct: 433 LKPDRVTLMGILVACCYAGFVNEGIQIFSSM 463
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 38/237 (16%)
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
D I D N T++ +C L ++ K G L A+D+F MP+++VVSWN +I L G +
Sbjct: 63 DDIPDKN-TITWNVC--LKGLF-KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHE 118
Query: 126 EAIEMFEKMRASGLFPDEITFT---GLLSACSHSGLVE-------MGRYYFGLMSSTFGI 175
I +F M+ + P E TF+ L++ H + + RY + +S +
Sbjct: 119 YGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDM 178
Query: 176 ------------------SPDVAHYACMVDLLGRGGFLGEAMS---LIQKLPMKPDAVVW 214
DV + C++ G A+ L++++ ++PD
Sbjct: 179 YRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTV 238
Query: 215 GALLGACKTFGNLEMGKQILKQLLELGRYDSGLYVLLS--NMYSESQRWDDMKKIRK 269
++ C L GKQ L +++G + S VL + +M+S+ R DD K+ +
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMG-FLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 29/200 (14%)
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGAL 118
L K H + + + N + +Y K G++ A+ +F +P KN ++WNV + L
Sbjct: 21 TLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGL 80
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG----LVEMGRYYFGLMSSTFG 174
+G A+++F++M + +GL+S H +M R+ TF
Sbjct: 81 FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 175 ISPD-------------------VAHYACMV-----DLLGRGGFLGEAMSLIQKLPMKPD 210
I V+ Y +V D+ R G A+S+ + + D
Sbjct: 141 ILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR-D 199
Query: 211 AVVWGALLGACKTFGNLEMG 230
V W L+ +C GN E+
Sbjct: 200 VVSWNCLILSCSDSGNKEVA 219
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 113/189 (59%), Gaps = 7/189 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLAL 60
MP +N VSWNS+I+ + GQ A A+E F M G PD T++S+LS+C HM DL L
Sbjct: 357 MPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLEL 416
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G DYI N I ++ + SL+ MYA+ G L A +F M +++VVS+N + A A
Sbjct: 417 GDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAA 476
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G G E + + KM+ G+ PD +T+T +L+AC+ +GL++ G+ F + +P
Sbjct: 477 NGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLAD 531
Query: 181 HYACMVDLL 189
HYACM DLL
Sbjct: 532 HYACM-DLL 539
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 135/303 (44%), Gaps = 68/303 (22%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP K+ VSWN+++S + Q G +A+ LF M GV P+ T V ++S+CS D +L
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF-------------------- 101
+ I + + ++ + +L++M+AKC +Q+A IF
Sbjct: 284 RSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTR 343
Query: 102 ------------GMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG-LFPDEITFTG 148
MP++NVVSWN +I A +G AIE FE M G PDE+T
Sbjct: 344 IGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMIS 403
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEA---------- 198
+LSAC H +E+G + I + + Y ++ + RGG L EA
Sbjct: 404 VLSACGHMADLELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 199 ---------------------MSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQIL 234
++L+ K+ ++PD V + ++L AC G L+ G++I
Sbjct: 463 DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
Query: 235 KQL 237
K +
Sbjct: 523 KSI 525
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 126/274 (45%), Gaps = 25/274 (9%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL--ALGKKAHDYI 68
NS+ + + + L+ + G+MPD + ++ S G L AL +K +
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLG-FF 133
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
D + N +M+MY K ++++A +F + Q+ WNV+I G+ +EA
Sbjct: 134 KDPYVR------NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEAC 187
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
++F+ M + D +++T +++ + +E R YF M V + M+
Sbjct: 188 KLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEK-----SVVSWNAMLSG 238
Query: 189 LGRGGFLGEAMSLIQ---KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYD 244
+ GF +A+ L +L ++P+ W ++ AC + + + ++K + E R +
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 245 SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKK 278
+ L +M+++ + D++ R+I N+ G ++
Sbjct: 299 CFVKTALLDMHAKCR---DIQSARRIFNELGTQR 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
K D + +N++ VS T+ ++ +AK L+ A F MP+K+VVSWN ++ A +G
Sbjct: 188 KLFDMMPENDV-VSWTV---MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG 243
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
++A+ +F M G+ P+E T+ ++SACS + R L+ + +
Sbjct: 244 FTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEK-RVRLNCFVK 302
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++D+ + + A + +L + + V W A++ G++ +Q+ +
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 128/238 (53%), Gaps = 1/238 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
M +++ VSWN++++ + G+ +A+ F M V P TL ++L+ C+++ L L
Sbjct: 456 MSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNL 514
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
GK H ++ + + V + ++++MY+KC A+++F ++++ WN II
Sbjct: 515 GKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCR 574
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+G KE E+F + G+ PD +TF G+L AC G VE+G YF MS+ + ISP V
Sbjct: 575 NGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVE 634
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
HY CM++L + G L + + +P P + + AC+ + ++G K+L+
Sbjct: 635 HYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 37/272 (13%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP +N VSWN+++ +V + EA++ M DN TLV IL+ CS + D+ +
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ-KNVVSWNVIIGALA 119
GK+AH +I + +V + N+L++MY KCG LQ+A F M + ++ VSWN ++ +A
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G ++A+ FE M+ P + T LL+ C++ + +G+ G + G DV
Sbjct: 474 RVGRSEQALSFFEGMQVEAK-PSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYKIDV 531
Query: 180 AHYACMVDLL----------------------------------GRGGFLGEAMSLIQKL 205
MVD+ GR + E L++
Sbjct: 532 VIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENE 591
Query: 206 PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
+KPD V + +L AC G++E+G Q +
Sbjct: 592 GVKPDHVTFLGILQACIREGHVELGFQYFSSM 623
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 32/254 (12%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
VSWN I+ +++ G + EA+ +F +M V P N T+ S++ +CS L +GK H
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFG------------------------- 102
++ + S+ +MY KC L++A +F
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 103 ------MPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS 156
MP++N+VSWN ++G EA++ MR D +T +L+ CS
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 157 GLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGA 216
V+MG+ G + G +V ++D+ G+ G L A +++ D V W A
Sbjct: 409 SDVQMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNA 467
Query: 217 LLGACKTFGNLEMG 230
LL G E
Sbjct: 468 LLTGVARVGRSEQA 481
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP ++ SWN++I+ Q G E +F RM GV + +L SC + DL L
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
++ H + + +V L S++++Y KC + A +F + + VSWNVI+
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR 163
G EA+ MF KM + P T + ++ ACS S +E+G+
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGK 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 48 ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN 107
+ SCS + +K ++ + + L N + Y KCG + A ++F MP+++
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 108 VVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG 167
SWN +I A A +G E MF +M G+ E +F G+L +C GL+ R
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQ 183
Query: 168 LMSST--FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFG 225
L + +G S +V +VD+ G+ + +A + ++ + P V W ++ G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIVRRYLEMG 242
Query: 226 NLEMGKQILKQLLEL 240
+ + ++LEL
Sbjct: 243 FNDEAVVMFFKMLEL 257
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 138/275 (50%), Gaps = 10/275 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P N NS+++ + G + +E+F M G D TL ++L + S L+L
Sbjct: 377 LPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS----LSLP 432
Query: 62 KKAHD----YIC--DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVII 115
+ H + C + V + SL++ Y K G + + +F + N+ II
Sbjct: 433 ESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSII 492
Query: 116 GALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGI 175
A +G G + ++M +M L PDE+T +LS CSHSGLVE G F + S +GI
Sbjct: 493 NGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGI 552
Query: 176 SPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
SP YACMVDLLGR G + +A L+ + D V W +LL +C+ N +G++ +
Sbjct: 553 SPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAE 612
Query: 236 QLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKI 270
L+ L + +Y+ +S Y E ++ ++IR+I
Sbjct: 613 VLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREI 647
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 3/204 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N N ++ C Q G+ E++ RM + GV + T ++ CSH + GK+
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL 235
Query: 65 HDYICDNNITVS-VTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H + + +S + + N L++ Y+ CG L +M F +P+K+V+SWN I+ A +GS
Sbjct: 236 HSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGS 295
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR-YYFGLMSSTFGISPDVAHY 182
+++++F KM+ G P F L+ CS + ++ G+ + ++ F +S
Sbjct: 296 VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS 355
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLP 206
A ++D+ G+ + + L Q LP
Sbjct: 356 A-LIDMYGKCNGIENSALLYQSLP 378
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 46/277 (16%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P K+ +SWNSI+S G ++++LF +M G P +S L+ CS D+ G
Sbjct: 275 VPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG 334
Query: 62 KKAHDYICDNNITV-SVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
K+ H Y+ V S+ + ++L++MY KC ++ + ++ +P N+ N ++ +L
Sbjct: 335 KQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMH 394
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACS-------------------------- 154
G K+ IEMF M G DE+T + +L A S
Sbjct: 395 CGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADV 454
Query: 155 -----------HSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ 203
SG E+ R F + +P++ +++ R G + + +++
Sbjct: 455 AVSCSLIDAYTKSGQNEVSRKVFDELD-----TPNIFCLTSIINGYARNGMGTDCVKMLR 509
Query: 204 ---KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
++ + PD V ++L C G +E G+ I L
Sbjct: 510 EMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL 546
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 22/271 (8%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M V++ V++N +IS + + G A+EL+ M G+ +T S+LS CS G
Sbjct: 72 MSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG 131
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H + ++ + ++L+ +YA + A+ +F M +N+ N+++
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G K E++ +M G+ + +T+ ++ CSH LV G+ L+ + ++
Sbjct: 192 GESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV 251
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+VD G L +M +P K D + W +++ C +G+ +L L
Sbjct: 252 ANVLVDYYSACGDLSGSMRSFNAVPEK-DVISWNSIVSVCADYGS------VLDSL---- 300
Query: 242 RYDSGLYVLLSNMYSESQRWDDMKKIRKIMN 272
+++S+ Q W IR M+
Sbjct: 301 -----------DLFSKMQFWGKRPSIRPFMS 320
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
MM K+ +SW ++IS ++G +A+ +F M +P+ T+ SIL +CS L
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
G++ H + I V + SLM+MYAKCG + +F GM +N V+W II A A
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G G+EAI +F M+ L + +T +L AC G + +G+ + I +V
Sbjct: 363 EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVY 421
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ +V L + G +A +++Q+LP + D V W A++ C + G+ LK++++
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 241 G 241
G
Sbjct: 481 G 481
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 121/217 (55%), Gaps = 2/217 (0%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M +N V+W SII+ H +EG EA+ LF M ++ +N T+VSIL +C +G L LG
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
K+ H I N+I +V + ++L+ +Y KCG + A ++ +P ++VVSW +I +
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA++ ++M G+ P+ T++ L AC++S + +GR + +S +V
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS-NVFV 523
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALL 218
+ ++ + + GF+ EA + +P K + V W A++
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMI 559
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
+P ++ VSW ++IS G +EA++ M GV P+ T S L +C++ L +G
Sbjct: 446 LPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG 505
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALH 121
+ H N+ +V + ++L++MYAKCG + A +F MP+KN+VSW +I A +
Sbjct: 506 RSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARN 565
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSAC 153
G +EA+++ +M A G D+ F +LS C
Sbjct: 566 GFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 10/223 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATL-VSILSSCSHMGDLAL 60
MP KN V+W ++I +++ G EA LF G+ N + V +L+ CS + L
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 61 GKKAHDYICDNNITVSV---TLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGA 117
G++ H N + V V + +SL+ YA+CG L +A+ F M +K+V+SW +I A
Sbjct: 203 GRQVHG----NMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISA 258
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
+ G G +AI MF M P+E T +L ACS + GR L+ I
Sbjct: 259 CSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM-IKT 317
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
DV ++D+ + G + + + + + + V W +++ A
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNR-NTVTWTSIIAA 359
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGL- 139
N+L++ + G L A +F MP+KN V+W +I +G EA +FE G+
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 140 FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAM 199
F +E F LL+ CS E+GR G M G+ + + +V + G L A+
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKV-GVGNLIVE-SSLVYFYAQCGELTSAL 238
Query: 200 SLIQKLPMKPDAVVWGALLGACKTFGN 226
+ K D + W A++ AC G+
Sbjct: 239 RAFDMMEEK-DVISWTAVISACSRKGH 264
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 101/190 (53%)
Query: 41 DNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF 100
D + L+ + C L K H I + + ++ + L+ MY+ CG A +F
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 101 FGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE 160
M +KN+ +W +II A +G G++AI+MF + + G PD F G+ AC G V+
Sbjct: 313 EKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVD 372
Query: 161 MGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
G +F MS +GI+P + Y +V++ GFL EA+ ++++PM+P+ VW L+
Sbjct: 373 EGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNL 432
Query: 221 CKTFGNLEMG 230
+ GNLE+G
Sbjct: 433 SRVHGNLELG 442
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
M KN +W II C + G +A+++F R G +PD I +C +GD+ G
Sbjct: 315 MSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG 374
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
+ + D I S+ SL+ MYA G L A++ MP + NV W ++
Sbjct: 375 LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSR 434
Query: 120 LHGS 123
+HG+
Sbjct: 435 VHGN 438
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+N +W ++I C+V+ +E+F M +S PD+ T+ +L+ CS + L LGK+
Sbjct: 482 RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL 541
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H +I + ++ MY KCG L++A F + K ++W II A +
Sbjct: 542 HGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELF 601
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
++AI FE+M + G P+ TFT +LS CS +G V+ +F LM + + P HY+
Sbjct: 602 RDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSL 661
Query: 185 MVDLLGRGGFLGEAMSL 201
+++LL R G + EA L
Sbjct: 662 VIELLNRCGRVEEAQRL 678
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 4/217 (1%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
+NA+SW +++S + G+ +A+ M G PD T+ ++L C+ + + GK+
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSG 124
H Y N +V+L SLM MY+KCG + + +F + Q+NV +W +I +
Sbjct: 441 HCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFG-LMSSTFGISPDVAHYA 183
+ IE+F M S PD +T +L+ CS +++G+ G ++ F P V+ A
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--A 558
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGA 220
++ + G+ G L A + +K ++ W A++ A
Sbjct: 559 RIIKMYGKCGDLRSANFSFDAVAVK-GSLTWTAIIEA 594
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 39/272 (14%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKK 63
++ V W ++I+ + EA+ LF M + P++ L +IL + L LGK+
Sbjct: 278 RDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKE 337
Query: 64 AHDYICDNNITVSVTLCNS-LMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHG 122
H ++ + V +S L+++Y KCG + + +F+G Q+N +SW ++ A +G
Sbjct: 338 VHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANG 397
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGR--YYFGL------------ 168
+A+ M+ G PD +T +L C+ ++ G+ + + L
Sbjct: 398 RFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVT 457
Query: 169 ----MSSTFGISP------------DVAHYACMVDLLG-----RGGFLGEAMSLIQKLPM 207
M S G+ +V + M+D R G E L+
Sbjct: 458 SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGI--EVFRLMLLSKH 515
Query: 208 KPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+PD+V G +L C L++GK++ +L+
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILK 547
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 6 NAVSWNSIISCHVQEG--QHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
N SWN+++ V G ++ + + F M GV + +L ++ S + L G K
Sbjct: 176 NVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLK 235
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
H N + SV L SL++MY KCG + A +F + ++++V W +I LA +
Sbjct: 236 THALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKR 295
Query: 124 GKEAIEMFEKM-RASGLFPDEITFTGLLSACSHSGLVEMGRYYFG--LMSSTFGISPDVA 180
EA+ +F M ++P+ + T +L +++G+ L S + P V
Sbjct: 296 QWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV- 354
Query: 181 HYACMVDLL--------GRGGFLG--------------------------EAMSLIQKLP 206
++ ++DL GR F G ++ +Q+
Sbjct: 355 -HSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 413
Query: 207 MKPDAVVWGALLGACKTFGNLEMGKQI 233
+PD V +L C ++ GK+I
Sbjct: 414 FRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Query: 39 MPDNATLVS-ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAM 97
+P NAT S +L +C L GK+ H +I N + + L L++MY CG+++ A
Sbjct: 107 IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQ 166
Query: 98 DIFFGMPQKNVVSWNVIIGALALHGSGK--EAIEMFEKMRASGLFPDEITFTGLLSACSH 155
+F NV SWN ++ + G + + + F +MR G+ + + + + + +
Sbjct: 167 KVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAG 226
Query: 156 SGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWG 215
+ + G L G+ V +VD+ + G +G A + ++ ++ D VVWG
Sbjct: 227 ASALRQGLKTHALAIKN-GLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-VERDIVVWG 284
Query: 216 ALLG 219
A++
Sbjct: 285 AMIA 288
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 19 QEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVT 78
Q + +A+EL + G MPD V + SC+++ L KK HD+ +
Sbjct: 217 QRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 79 LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG 138
L N +++M+ +C ++ A +F M K++ SW++++ A + +G G +A+ +FE+M G
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG 332
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEA 198
L P+E TF + AC+ G +E +F M + GISP HY ++ +LG+ G L EA
Sbjct: 333 LKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEA 392
Query: 199 MSLIQKLPMKPDAVVWGALLGACKTFGNLEM 229
I+ LP +P A W A+ + G++++
Sbjct: 393 EQYIRDLPFEPTADFWEAMRNYARLHGDIDL 423
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 2/214 (0%)
Query: 19 QEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVT 78
+EG+ +A+E+ G + D L I C L K H++I + ++
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 79 LCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASG 138
NS++ MY+ CG+++ A+ +F MP++N+ +W +I A +G G++AI+ F + + G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEA 198
PD F + AC G + G +F M +GI P + HY +V +L G+L EA
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 199 MSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQ 232
+ ++ M+P+ +W L+ + G+L +G +
Sbjct: 338 LRFVES--MEPNVDLWETLMNLSRVHGDLILGDR 369
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N +W +I C + GQ +A++ F R G PD I +C +GD+ G
Sbjct: 242 MPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALAL 120
+ + + I + SL+ M A+ G L A+ M + NV W ++ +
Sbjct: 302 LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRV 360
Query: 121 HGS---GKEAIEMFEKMRASGL 139
HG G +M E++ AS L
Sbjct: 361 HGDLILGDRCQDMVEQLDASRL 382
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 2/227 (0%)
Query: 20 EGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTL 79
+G EA+E+ + G D L+ + C L + H+ I V
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 80 CNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGL 139
N+++ MY+ C ++ A+ +F MP+ N + V++ +G G+EAI++F + + G
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN 216
Query: 140 FPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAM 199
P+ F + S C+ +G V+ G F M +GI P + HY + +L G L EA+
Sbjct: 217 KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 200 SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI--LKQLLELGRYD 244
+ ++++PM+P VW L+ + G++E+G + L + L+ R D
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLD 323
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP N+ + ++ C V G EA++LF R G P+ + S+C+ GD+ G
Sbjct: 180 MPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEG 239
Query: 62 K-KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
+ + I S+ +S+ M A G L A++ MP + +V W ++
Sbjct: 240 SLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSR 299
Query: 120 LHGS---GKEAIEMFEKMRASGLFPDEITFTGLLSA 152
+HG G E+ EK+ A+ L D+++ GL++
Sbjct: 300 VHGDVELGDRCAELVEKLDATRL--DKVSSAGLVAT 333
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 4/216 (1%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
EA+E+ + G + D L+ + C + L + HD I + ++++
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI----TPLDARSYHTVI 150
Query: 85 NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEI 144
MY+ C + A+++F MP++N +W +I LA +G G+ AI+MF + G PD+
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 145 TFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQK 204
F + AC G + G +F M +G+ + Y ++++L G L EA+ +++
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 205 LPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLEL 240
+ ++P +W L+ C G LE+G + + + +L
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKL 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
MP +N+ +W ++I C + G+ A+++F R G PD ++ +C +GD+ G
Sbjct: 169 MPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG 228
Query: 62 KKAHDYIC-DNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-QKNVVSWNVIIGALA 119
+ + D + +S+ +++ M A CG L A+D M + +V W ++
Sbjct: 229 LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCW 288
Query: 120 LHGS---GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVE 160
+ G G E+ +K+ AS + + + GL++A + +E
Sbjct: 289 VQGYLELGDRFAELIKKLDASRMSKE--SNAGLVAAKASDSAME 330
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 136/301 (45%), Gaps = 9/301 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++N +++ +EG+ EA++ M SG P+ T IL S G +K
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSWNVIIGALALH 121
+ + SV N L+N + G L A+DI MPQ N +S+N ++
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
AIE E+M + G +PD +T+ +L+A G VE +SS G SP +
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLIT 451
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y ++D L + G G+A+ L+ ++ +KPD + + +L+G G ++ + +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 239 ELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
+G R ++ + + +S++ D M + G K +I I+G Y+ M
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 298 D 298
+
Sbjct: 572 E 572
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 10/244 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++N+I+ G+ +AME+ RM PD T ++ + + K
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
D + D T V N L+N K G L A+ MP Q NV++ N+I+ ++
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMS-STFGISPDVA 180
G +A ++ M G P +TF L++ GL +GR L G P+
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL--LGRAIDILEKMPQHGCQPNSL 380
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQL 237
Y ++ + + A+ ++++ + PD V + +L A G +E +IL QL
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 238 LELG 241
G
Sbjct: 441 SSKG 444
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N++S+N ++ +E + A+E RM G PD T ++L++ G + +
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV----VSWNVIIGALALH 121
+ + + + N++++ AK G A+ + M K++ ++++ ++G L+
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EAI+ F + G+ P+ +TF ++ S + + M + G P+
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETS 556
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL 205
Y +++ L G EA+ L+ +L
Sbjct: 557 YTILIEGLAYEGMAKEALELLNEL 580
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 2/191 (1%)
Query: 109 VSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL 168
V N + + G +E + E M G PD I T L+ G +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 169 MSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLE 228
+ + G PDV Y M+ + G + A+S++ ++ + PD V + +L + G L+
Sbjct: 163 LEGS-GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLK 221
Query: 229 MGKQILKQLLELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEI 287
++L ++L+ Y D Y +L K+ M D G ++ +
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 288 DGCCYQFMVDD 298
+G C + +D+
Sbjct: 282 NGICKEGRLDE 292
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V++NS+IS + ++G EAMEL +M G PD T ++LS G + +
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALHGS 123
+ + ++ N+ + MY G M IF + ++V+WN ++ +G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
E +F++M+ +G P+ TF L+SA S G E + M G++PD++ Y
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYN 528
Query: 184 CMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGA 220
++ L RGG ++ ++ ++ KP+ + + +LL A
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 125/315 (39%), Gaps = 51/315 (16%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL------ALGK 62
S+ S+IS G++ EA+ +F +M G P T IL+ MG + K
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 63 KAHDYICDNNITVS--VTLC----------------------------NSLMNMYAKCGA 92
D I + T + +T C N+L+++Y K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 93 LQTAMDIFFGMP----QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTG 148
+ AM + M ++V++N +I A A G EA+E+ +M G PD T+T
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 149 LLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLP-- 206
LLS +G VE F M + G P++ + + + G G E M + ++
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 207 -MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY----DSGLYVLLSNMYSESQRW 261
+ PD V W LL FG M ++ E+ R + + L + YS +
Sbjct: 449 GLSPDIVTWNTLLA---VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 262 DDMKKIRKIMNDSGI 276
+ + + M D+G+
Sbjct: 506 EQAMTVYRRMLDAGV 520
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 25 EAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM 84
EA F + G PD TL S++S +A DY+ + T S+ NSLM
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 85 NMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLF 140
M+++ + +I + K +++S+N +I A + ++A +F +MR SG+
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 141 PDEITFTGLLSACSHSGLVEMG----RYYFGLMSSTFGISPDVAHYACMVD 187
PD IT+ + + + + E RY G P+ Y +VD
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMI-----KHGCRPNQNTYNSIVD 777
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 51/265 (19%)
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWN 112
D + +K + + DN++ + ++M K G + +A ++F G+ + +V S+
Sbjct: 159 DWFMKQKDYQSMLDNSVVAII------ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 113 VIIGALALHGSGKEAIEMF------------------------------------EKMRA 136
+I A A G +EA+ +F EKM++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 137 SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLG 196
G+ PD T+ L++ C L + F M + G S D Y ++D+ G+
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPK 331
Query: 197 EAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLS 252
EAM ++ ++ + P V + +L+ A G L+ ++ Q+ E G + D Y L
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 253 NMYSESQRWDDMKKIRKIMNDSGIK 277
+ + + + + I + M ++G K
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCK 416
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 120/239 (50%), Gaps = 15/239 (6%)
Query: 8 VSWNSIISCHVQEGQHAEAM-ELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH- 65
+++N++I+ + G E + LF M G+ PD T ++LS+C+ G LG +A
Sbjct: 212 LTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG---LGDEAEM 268
Query: 66 --DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSWNVIIGALA 119
+ D I +T + L+ + K L+ D+ M ++ S+NV++ A A
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA 328
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
GS KEA+ +F +M+A+G P+ T++ LL+ SG + R F M S+ PD
Sbjct: 329 KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS-NTDPDA 387
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILK 235
A Y ++++ G GG+ E ++L + ++PD + ++ AC G E ++IL+
Sbjct: 388 ATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 35/280 (12%)
Query: 13 IISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNN 72
+IS +EG + +E+F M GV + +++++ G + D + +
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 73 ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFE 132
I+ S+ N+++N A+ G + W ++G +F
Sbjct: 207 ISPSILTYNTVINACARGG-----------------LDWEGLLG-------------LFA 236
Query: 133 KMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRG 192
+MR G+ PD +T+ LLSAC+ GL + F M+ GI PD+ Y+ +V+ G+
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKL 295
Query: 193 GFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLY 248
L + L+ ++ PD + LL A G+++ + Q+ G ++ Y
Sbjct: 296 RRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 249 VLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEID 288
+L N++ +S R+DD++++ M S A +I I+
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 63/286 (22%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSS----------CSHMGD 57
V++N+++S G EA +F M G++PD T ++ + C +G+
Sbjct: 248 VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE 307
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM------PQKNVVS- 110
+A G D +T N L+ YAK G+++ AM +F M P N S
Sbjct: 308 MASGGSLPD----------ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 111 --------------------------------WNVIIGALALHGSGKEAIEMFEKMRASG 138
+N++I G KE + +F M
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 139 LFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEA 198
+ PD T+ G++ AC GL E R M++ I P Y +++ G+ EA
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 199 M---SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+ + + ++ P + +LL + G ++ + IL +L++ G
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 136/331 (41%), Gaps = 32/331 (9%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNAT---LVSILSSCSHMGDLALGK 62
NA +++ +++ Q G++ + +LF M S PD AT L+ + + ++
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV--T 408
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV----SWNVIIGAL 118
HD + + NI + ++ K G + A I M ++V ++ +I A
Sbjct: 409 LFHDMV-EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
+EA+ F M G P TF LL + + GLV+ + + GI +
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS-GIPRN 526
Query: 179 VAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+ ++ +GG EA+ ++K PD A+L + +F L + +
Sbjct: 527 RDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL-SVYSFARLV--DECRE 583
Query: 236 QLLELGRYD----SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
Q E+ D Y ++ +Y +++RWDD+ ++ + M + + + I G
Sbjct: 584 QFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGD- 642
Query: 292 YQFMVDDKNHEVSTSIYSMVDQLMDHLKSVG 322
DD N + +V+ ++D L S G
Sbjct: 643 ---YDDDSN-------WQIVEYVLDKLNSEG 663
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++NS+I C G+ ++A L M + P+ T +++ + G L +K +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
D + +I + +SL+N + L A +F M K NVV++N +I
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+E +E+F +M GL + +T+ L+ +G +M + F M S G+ PD+
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIIT 467
Query: 182 YACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALL-GACKTFGNLEMG 230
Y+ ++D L + G L +A+ + +QK M+PD + ++ G CK G +E G
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA-GKVEDG 519
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 21/300 (7%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD----LALG 61
N V++N++I + +EA+ L RM G PD T ++++ GD L+L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGA 117
KK + ++ + T+ ++L N + A+++F M K NVV++N +I
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNY----KNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSSTFGIS 176
L +G +A + M + P+ +TF+ L+ A G LVE + Y ++ + I
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--ID 357
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKTFGNLEMGKQ 232
PD+ Y+ +++ L EA + + + K P+ V + L+ G CK +E G +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA-KRVEEGME 416
Query: 233 ILKQLLELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
+ +++ + G ++ Y L ++ D +KI K M G+ SI +DG C
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
S+N +I+C + Q A+ + +M G PD TL S+L+ H GK+
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCH------GKR----- 165
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
I+ +V L + + M Q N V++N +I L LH EA+
Sbjct: 166 ----ISEAVALVDQMFVMEY----------------QPNTVTFNTLIHGLFLHNKASEAV 205
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+ ++M A G PD T+ +++ G +++ M I DV Y ++D
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYTTIIDA 264
Query: 189 LGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
L + +A++L ++ ++P+ V + +L+ +G ++L ++E
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N V++N++I Q G A ++F +M GV PD T +L G L
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+Y+ + + + N ++ K G ++ D+F + K NV+ + +I
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
G +EA +F +M+ G P+ T+ L+ A G
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 9/274 (3%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
N II + G ++A++L +G+ ATLVSI+S+ + G + + +
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV----SWNVIIGALALHGSGKE 126
+ I N+L+ Y K G L+ A + M ++ V +++++I A G +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMV 186
A + ++M A + P+ F+ LL+ G + M S G+ PD Y ++
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS-IGVKPDRQFYNVVI 451
Query: 187 DLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRY 243
D G+ L AM+ ++ ++PD V W L+ G + +++ + + G
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 244 D-SGLYVLLSNMYSESQRWDDMKKIRKIMNDSGI 276
+ Y ++ N Y + +RWDDMK++ M GI
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+WN++I CH + G+H A E+F M G +P T +++S K+
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
+ I +V +L+++Y K G
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFN------------------------------- 566
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
+AIE E+M++ GL P + L++A + GL E F +M+S G+ P + +
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSL 625
Query: 186 VDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGA 220
++ G EA +++Q + +KPD V + L+ A
Sbjct: 626 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 160/388 (41%), Gaps = 93/388 (23%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL----ALGKKA 64
++N +I C +EG A LF M G++PD T S++ +G L ++
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALAL 120
D C+ ++ N+L+N + K G L ++ + M + NVVS++ ++ A
Sbjct: 324 KDMCCEPDVITY----NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSA--------------------------CS 154
G ++AI+ + MR GL P+E T+T L+ A +
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 155 HSGLVE---------MGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL 205
++ L++ FG M T G+ P++A Y ++ + + A+ L+ +L
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 206 P---MKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSES--- 258
+KPD +++G + + +E K ++ ++ E G + +S +Y L + Y +S
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 259 ----QRWDDMKKI-----------------------------RKIMNDSGIKKCRAISSI 285
D+MK++ +I ND G++ AI +
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 286 EIDGCCYQFMVDDKNHEVSTSIYSMVDQ 313
IDG C D E +T+++ + Q
Sbjct: 619 MIDGLC-----KDNQVEAATTLFEQMVQ 641
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 80 CNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVIIGALALHGSGKEAIEMFEKMR 135
CN L++ +AK G F M + V ++N++I + G + A +FE+M+
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 136 ASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS--------TF-------------- 173
GL PD +T+ ++ G ++ +F M T+
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 174 ------------GISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALL 218
G+ P+V Y+ +VD + G + +A+ ++++ + P+ + +L+
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 219 GACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGI 276
A GNL ++ ++L++G ++ Y L + +++R + +++ M+ +G+
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 105/243 (43%), Gaps = 7/243 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++ ++I + EA ELF +M +GV+P+ A+ +++ ++ +
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSWNVIIGALALH 121
+ + I + L + + ++ A + M + N + + ++ A
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ E + + ++M+ + +TF L+ + LV YF +S+ FG+ + A
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ M+D L + + A +L +++ K PD + +L+ GN+ + ++
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 239 ELG 241
E+G
Sbjct: 676 EIG 678
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 47 SILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ- 105
+++S+ G + + K+ + +V ++L++ Y + G + A+ +F M +
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 106 ---KNVVSWNVIIGALALHG-SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEM 161
N+V++N +I A G K+ + F++M+ +G+ PD ITF LL+ CS GL E
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 162 GRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL 218
R F M++ I DV Y ++D + +GG + A ++ ++P+K P+ V + ++
Sbjct: 358 ARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 219 GACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
G + + ++ LG D Y L ++Y++ R ++ I + M GIK
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 278 K 278
K
Sbjct: 477 K 477
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 10/255 (3%)
Query: 6 NAVSWNSII-SCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
N V++N++I +C + + + F M +GV PD T S+L+ CS G +
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNL 361
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALAL 120
D + + I V N+L++ K G + A +I MP K NVVS++ +I A
Sbjct: 362 FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK 421
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G EA+ +F +MR G+ D +++ LLS + G E M+S GI DV
Sbjct: 422 AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKKDVV 480
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQL 237
Y ++ G+ G E + ++ + P+ + + L+ G + +I ++
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 238 LELG-RYDSGLYVLL 251
G R D LY L
Sbjct: 541 KSAGLRADVVLYSAL 555
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 5 KNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
++ S+N+++ + GQ A E+ +M V +MP+ + +++ + G
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALAL 120
+ I + N+L+++Y K G + A+DI M +K+VV++N ++G
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G E ++F +M+ + P+ +T++ L+ S GL + F S G+ DV
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA-GLRADVV 550
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGA 220
Y+ ++D L + G +G A+SLI ++ + P+ V + +++ A
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 2 MPVK----NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGD 57
MPVK N VS++++I + G+ EA+ LF M G+ D + ++LS + +G
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 58 LALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNV 113
+ I V N+L+ Y K G +F M ++ N+++++
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 114 IIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF 173
+I + G KEA+E+F + +++GL D + ++ L+ A +GLV M+
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE- 578
Query: 174 GISPDVAHYACMVDLLGR 191
GISP+V Y ++D GR
Sbjct: 579 GISPNVVTYNSIIDAFGR 596
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 112 NVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS 171
+ +I L +G A +FE A G F+ L+SA SGL E F M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 172 TFGISPDVAHYACMVDLLGRGGF----LGEAMSLIQKLPMKPDAVVWGALLGACKTFGNL 227
+G+ P++ Y ++D G+GG + + +Q+ ++PD + + +LL C G
Sbjct: 297 -YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 228 EMGKQILKQL 237
E + + ++
Sbjct: 356 EAARNLFDEM 365
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 10/233 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V+++S+ISC G+ ++A L M + PD T +++ + G L +K +
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
D + +I S+ +SL+N + L A +F M K +VV++N +I +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+E +E+F +M GL + +T+ L+ +G +M + F M S G+ P++
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMT 468
Query: 182 YACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALL-GACKTFGNLEMG 230
Y ++D L + G L +AM + +Q+ M+P + ++ G CK G +E G
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA-GKVEDG 520
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N V++N +I Q G A E+F M GV P+ T ++L G L
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+Y+ + + ++ N ++ K G ++ D+F + K +VV++N +I
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG--------LVEMGRYYFGLMSS 171
GS +EA +F++M+ G P+ + L+ A G + EM F +S
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 172 TFGISPDVAH 181
T G+ ++ H
Sbjct: 608 TIGLVTNMLH 617
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +++ +I+C + Q A+ + +M G P+ TL S+L+ H
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH----------- 163
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
I+ +V L + + F Q N V++N +I L LH
Sbjct: 164 ----SKRISEAVALVDQM----------------FVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ + ++M A G PD +T+ +++ G ++ M + P V Y +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYNTI 262
Query: 186 VDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+D L + + +A++L +++ K P+ V + +L+ +G ++L ++E
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 18/227 (7%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG------DLALG 61
V+ N ++S + Q+++A+ F M + V PD T I+ S +G DL
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 308
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGA 117
+ C ++ V+ T S+M++Y+ G ++ +F M + N+VS+N ++GA
Sbjct: 309 MREKRAECRPDV-VTFT---SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 364
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
A+HG A+ + ++ +G+ PD +++T LL++ S + F LM P
Sbjct: 365 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKP 423
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGAC 221
+V Y ++D G GFL EA+ + +++ +KP+ V LL AC
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 43/279 (15%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+A +++++I+ H + GQ AM L M + + P +T +++++C G+ +
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
+ DN + + N +++ Y A+ F M + + ++N+II L+
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 296
Query: 122 GSGKEAIEMFEKMRASGL--FPDEITFTGLLSACSHSGLVE------------------- 160
G +A+++F MR PD +TFT ++ S G +E
Sbjct: 297 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 356
Query: 161 -----MGRYYFGLMSSTF----------GISPDVAHYACMVDLLGRGGFLGEAMS---LI 202
MG Y MS T GI PDV Y C+++ GR G+A ++
Sbjct: 357 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 203 QKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+K KP+ V + AL+ A + G L +I +Q+ + G
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 11/226 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++ SI+ + +G+ +F M G+ P+ + +++ + + G
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
I N I V L+N Y + A ++F M ++ NVV++N +I A +
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS-GLVEMGRYYFGLMSSTFGISPDVA 180
G EA+E+F +M G+ P+ ++ LL+ACS S V + S GI+ + A
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR--GINLNTA 496
Query: 181 HYACMVDLLGRGGFLGEAMSLIQ---KLPMKPDAVVWGALL-GACK 222
Y + L +A++L Q K +K D+V + L+ G+C+
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++NS I ++ + +A+ L+ M V D+ T ++S M
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 553
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
+ D +I ++ + +S++ Y+K G + A IF M + +V+++ ++ A
Sbjct: 554 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 613
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+A E+F +M A+G+ PD I + L+ A + G
Sbjct: 614 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 18/227 (7%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG------DLALG 61
V+ N ++S + Q+++A+ F M + V PD T I+ S +G DL
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNS 176
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGA 117
+ C ++ V+ T S+M++Y+ G ++ +F M + N+VS+N ++GA
Sbjct: 177 MREKRAECRPDV-VTFT---SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 232
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
A+HG A+ + ++ +G+ PD +++T LL++ S + F LM P
Sbjct: 233 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKP 291
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGAC 221
+V Y ++D G GFL EA+ + +++ +KP+ V LL AC
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 43/279 (15%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+A +++++I+ H + GQ AM L M + + P +T +++++C G+ +
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 104
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
+ DN + + N +++ Y A+ F M + + ++N+II L+
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 164
Query: 122 GSGKEAIEMFEKMRA--SGLFPDEITFTGLLSACSHSGLVE------------------- 160
G +A+++F MR + PD +TFT ++ S G +E
Sbjct: 165 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 224
Query: 161 -----MGRYYFGLMSSTF----------GISPDVAHYACMVDLLGRG---GFLGEAMSLI 202
MG Y MS T GI PDV Y C+++ GR G E ++
Sbjct: 225 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 203 QKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
+K KP+ V + AL+ A + G L +I +Q+ + G
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 11/226 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++ SI+ + +G+ +F M G+ P+ + +++ + + G
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
I N I V L+N Y + A ++F M ++ NVV++N +I A +
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHS-GLVEMGRYYFGLMSSTFGISPDVA 180
G EA+E+F +M G+ P+ ++ LL+ACS S V + S GI+ + A
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR--GINLNTA 364
Query: 181 HYACMVDLLGRGGFLGEAMSLIQ---KLPMKPDAVVWGALL-GACK 222
Y + L +A++L Q K +K D+V + L+ G+C+
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++NS I ++ + +A+ L+ M V D+ T ++S M
Sbjct: 362 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 421
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
+ D +I ++ + +S++ Y+K G + A IF M + +V+++ ++ A
Sbjct: 422 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 481
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG 157
+A E+F +M A+G+ PD I + L+ A + G
Sbjct: 482 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 11/283 (3%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P+ + V ++ ++ + ++ + LF + + G+ D + +++ L+L
Sbjct: 75 PLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLAL 134
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAM---DIFFGMP-QKNVVSWNVIIGAL 118
+ S+ SL+N + AM D G+ + NVV +N II +L
Sbjct: 135 SCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G A+++ + M+ G+ PD +T+ L++ HSG + M GISPD
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR-MGISPD 253
Query: 179 VAHYACMVDLLGRGGFLGEAM----SLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
V ++ ++D+ G+ G L EA +IQ+ + P+ V + +L+ G L+ K++L
Sbjct: 254 VITFSALIDVYGKEGQLLEAKKQYNEMIQR-SVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 235 KQLLELGRYDSGL-YVLLSNMYSESQRWDDMKKIRKIMNDSGI 276
L+ G + + + Y L N Y +++R DD KI +M+ G+
Sbjct: 313 NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V +N+II ++GQ A+++ M G+ PD T S+++ H G + +
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ I+ V ++L+++Y K G L A + M Q+ N+V++N +I L +H
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA ++ + + G FP+ +T+ L++ + V+ G +MS G+ D
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD-GVDGDTFT 361
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALL-GAC 221
Y + + G A ++ ++ + PD + LL G C
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC 405
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V+++S+ISC G+ ++A +L M + P+ T +++ + G +K H
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
D + +I + NSL+N + L A +F M K ++ ++N +I
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
++ E+F +M GL D +T+T L+ H G + + F M S G+ PD+
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMT 397
Query: 182 YACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALL-GACK 222
Y+ ++D L G L +A+ + +QK +K D ++ ++ G CK
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V + V++ ++I +G A ++F +M GV PD T +L + G L +
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
DY+ + I + + + +++ K G + D+F + K NVV++N +I L
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG--------LVEMGRYYFGLMSS 171
+EA + +KM+ G PD T+ L+ A G + EM F +S
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 536
Query: 172 TFGISPDVAH 181
T G+ ++ H
Sbjct: 537 TIGLVANMLH 546
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++N +I+C + Q + A+ L +M G P TL S+L+ H GK+
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH------GKRIS 97
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
D +V L + ++ M + + +++ +I L LH
Sbjct: 98 D---------AVALVDQMVEMGYR----------------PDTITFTTLIHGLFLHNKAS 132
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ + ++M G P+ +T+ +++ G +++ M + I DV + +
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA-KIEADVVIFNTI 191
Query: 186 VDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+D L + + +A++L +++ K P+ V + +L+ ++G Q+L ++E
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 12/281 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++N++I + + GQ +AME M G D T ++++ +C D +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ + I V + ++ K G L +F M +K NV + V+I A
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
GS ++AI + +M G PD +T++ +++ +G VE YF G++ +
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMF 434
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y+ ++D LG+ G + EA L +++ K D+ + AL+ A ++ + K++
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 239 ELGRYDSGLY---VLLSNMYSESQRWDDMKKIRKIMNDSGI 276
E D +Y +LLS M+ E R ++ K+ +M D GI
Sbjct: 495 EEEGCDQTVYTYTILLSGMFKE-HRNEEALKLWDMMIDKGI 534
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
++N +I+ V++ Q +A+E+ M ++GV + T I+ + +GD + +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVS----WNVIIGALALHGSG 124
+ + V + +L+ K G +Q+A+ + M +N+ +N++I A G
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 125 KEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYAC 184
EA ++ ++M+ G+ PD T+T +SACS +G + M + G+ P++ Y
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA-LGVKPNIKTYTT 804
Query: 185 MVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALL 218
++ R +A+S +++ +KPD V+ LL
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 8/243 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ + +N+IIS G A++ M P T + I+ + GD+ +
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
D + +V N L+N + ++ A++I M N ++ I+ A
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASV 672
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A E F +++ GL D T+ LL AC SG ++ MS+ I +
Sbjct: 673 GDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR-NIPRNSFV 731
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y ++D R G + EA LIQ++ +KPD + + + AC G++ Q ++++
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 239 ELG 241
LG
Sbjct: 792 ALG 794
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 12/275 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ ++++++++ EG+ +EA+ L RM PD T+ ++++ G ++
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN----VVSWNVIIGALALH 121
D + + ++N K G A+D+F M ++N VV ++++I +L
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
GS +A+ +F +M G+ D +T++ L+ + G + G M I PDV
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVT 317
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKTFGNLEMGKQILKQL 237
++ ++D+ + G L EA L ++ + PD + + +L+ G CK L Q+ +
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE-NCLHEANQMFDLM 376
Query: 238 LELG-RYDSGLYVLLSNMYSESQRWDD-MKKIRKI 270
+ G D Y +L N Y +++R DD M+ R+I
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 134/295 (45%), Gaps = 11/295 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V+ +++I+ +G+ +EA+ L RM G PD T +L+ G+ AL
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ + NI SV + +++ K G+ A+ +F M K +VV+++ +IG L
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSSTFGISPDVA 180
G + +M +M + PD +TF+ L+ G L+E Y ++ T GI+PD
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI--TRGIAPDTI 351
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQL 237
Y ++D + L EA + + K PD V + L+ + ++ G ++ +++
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 238 LELGRYDSGL-YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
G + + Y L + +S + + K++ + M G+ I +DG C
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 15/299 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V ++ +I ++G +A+ LF M + G+ D T S++ + G G K
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV----VSWNVIIGALALH 121
+ NI V ++L++++ K G L A +++ M + + +++N +I
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA +MF+ M + G PD +T++ L+++ + V+ G F +SS G+ P+
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTIT 422
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GAC---KTFGNLEMGKQIL 234
Y +V + G L A L Q++ + P V +G LL G C + LE+ +++
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 235 KQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQ 293
K + LG G+Y ++ + + + DD + ++D G+K ++ I G C +
Sbjct: 483 KSRMTLG---IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 8/245 (3%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ + V+++++I V+EG+ EA EL+ M G+ PD T S++ L +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
D + + + L+N Y K + M +F + K N +++N ++
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G A E+F++M + G+ P +T+ LL +G + F M + ++ +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS-RMTLGI 490
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
Y ++ + + +A SL L +KPD V + ++G G+L + ++
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 237 LLELG 241
+ E G
Sbjct: 551 MKEDG 555
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ N +++N+++ Q G+ A ELF M GV P T +L G+L +
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+ + + +T+ + + N +++ + A +F + K +VV++NV+IG L
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA-CSHSGLV 159
GS EA +F KM+ G PD+ T+ L+ A SGL+
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 140/315 (44%), Gaps = 25/315 (7%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDL--- 58
P+ + +N + S + Q+ + FC+ M ++G+ D T+ +++ L
Sbjct: 66 PLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFA 124
Query: 59 --ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAM---DIFFGMPQK-NVVSWN 112
LG+ + IT S +L+N + G + A+ D M Q+ ++V+ +
Sbjct: 125 FSVLGRAWKLGYEPDTITFS-----TLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVS 179
Query: 113 VIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
+I L L G EA+ + ++M G PDE+T+ +L+ SG + F M
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDAVVWGALLGACKTFGNLEM 229
I V Y+ ++D L + G +A+SL ++ M K D V + +L+G G +
Sbjct: 240 -NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 230 GKQILKQLLELGRY---DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIE 286
G ++L+++ +GR D + L +++ + + + K++ M GI +
Sbjct: 299 GAKMLREM--IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 287 IDGCCYQFMVDDKNH 301
IDG C + + + N
Sbjct: 357 IDGFCKENCLHEANQ 371
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 149/338 (44%), Gaps = 48/338 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL------- 58
N S+N +I Q G+ EA L M + G PD + ++++ G+L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 59 ----ALGKKAHDYICDNNITVSVTLC------------------------NSLMNMYAKC 90
G K + YI + I + +C +L++ + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 91 GALQTAMDIFFGMPQK----NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
G ++ A F+ M + +V+++ II G EA ++F +M GL PD +TF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 147 TGLLSA-CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ-- 203
T L++ C + + R + ++ + G SP+V Y ++D L + G L A L+
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 204 -KLPMKPDAVVWGALL-GACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQR 260
K+ ++P+ + +++ G CK+ GN+E +++ + G D+ Y L + Y +S
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKS-GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 261 WDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
D ++I K M G++ ++ ++G C M++D
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 8/243 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ +++ +IIS Q G EA +LF M G+ PD+ T +++ G + + H
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVIIGALALH 121
+++ + +V +L++ K G L +A ++ M Q N+ ++N I+ L
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ +EA+++ + A+GL D +T+T L+ A SG ++ + M G+ P +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVT 563
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ +++ G L + L+ + K P+A + +L+ NL+ I K +
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 239 ELG 241
G
Sbjct: 624 SRG 626
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 55 MGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAK-CGALQTAMDIFFGMPQK----NVV 109
G L ++ + + + + +SV CN + +K C TA+ +F P+ NV
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 110 SWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM 169
S+N++I + G KEA + M G PD I+++ +++ G ++ +M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 170 SSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACK 222
G+ P+ Y ++ LL R L EA ++ + PD VV+ L+ G CK
Sbjct: 308 KRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 149/338 (44%), Gaps = 48/338 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL------- 58
N S+N +I Q G+ EA L M + G PD + ++++ G+L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 59 ----ALGKKAHDYICDNNITVSVTLC------------------------NSLMNMYAKC 90
G K + YI + I + +C +L++ + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 91 GALQTAMDIFFGMPQK----NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
G ++ A F+ M + +V+++ II G EA ++F +M GL PD +TF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 147 TGLLSA-CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ-- 203
T L++ C + + R + ++ + G SP+V Y ++D L + G L A L+
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 204 -KLPMKPDAVVWGALL-GACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQR 260
K+ ++P+ + +++ G CK+ GN+E +++ + G D+ Y L + Y +S
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKS-GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 261 WDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
D ++I K M G++ ++ ++G C M++D
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 8/243 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ +++ +IIS Q G EA +LF M G+ PD+ T +++ G + + H
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVIIGALALH 121
+++ + +V +L++ K G L +A ++ M Q N+ ++N I+ L
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ +EA+++ + A+GL D +T+T L+ A SG ++ + M G+ P +
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVT 563
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ +++ G L + L+ + K P+A + +L+ NL+ I K +
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 239 ELG 241
G
Sbjct: 624 SRG 626
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 55 MGDLALGKKAHDYICDNNITVSVTLCNSLMNMYAK-CGALQTAMDIFFGMPQK----NVV 109
G L ++ + + + + +SV CN + +K C TA+ +F P+ NV
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 110 SWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLM 169
S+N++I + G KEA + M G PD I+++ +++ G ++ +M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 170 SSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACK 222
G+ P+ Y ++ LL R L EA ++ + PD VV+ L+ G CK
Sbjct: 308 KRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 134/282 (47%), Gaps = 21/282 (7%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHM----GDLALG 61
N VS+++++S +V+ + EA+ +F M D L++C+ M G L +
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD-------LTTCNIMIDVYGQLDMV 346
Query: 62 KKAHDY---ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVI 114
K+A + +I +V N+++ +Y + A+ +F M +K NVV++N +
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
I ++A + ++M++ G+ P+ IT++ ++S +G ++ F + S+ G
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS-G 465
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ D Y M+ R G +G A L+ +L + PD + + G E +
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL-PDNIPRETAITILAKAGRTEEATWVF 524
Query: 235 KQLLELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSG 275
+Q E G D ++ + N+YS +QR+ ++ ++ + M +G
Sbjct: 525 RQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAG 566
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA- 64
NA+++++IIS + G+ A LF ++ SGV D +++ + +G + K+
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSWNVIIGALAL 120
H+ +NI + + AK G + A +F + K++ + +I +
Sbjct: 494 HELKLPDNIPRETAIT-----ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSR 548
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ IE+FEKMR +G FPD +L+A E + M + PD
Sbjct: 549 NQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEV 608
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMKPD 210
H+ M+ L SL Q+L P+
Sbjct: 609 HFQ-MLSLYSSKKDFEMVESLFQRLESDPN 637
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 145/299 (48%), Gaps = 19/299 (6%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLA----LG 61
N ++++++I+ EG+ +EA+EL RM G PD T+ ++++ G A L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV----VSWNVIIGA 117
K +Y C N +VT ++N+ K G AM++ M ++N+ V +++II
Sbjct: 217 DKMVEYGCQPN---AVTY-GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
L HGS A +F +M G+ + IT+ L+ ++G + G M I+P
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINP 331
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKTFGNLEMGKQI 233
+V ++ ++D + G L EA L +++ + PD + + +L+ G CK +L+ Q+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE-NHLDKANQM 390
Query: 234 LKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
+ ++ G + + +L N Y ++ R DD ++ + M+ G+ + I G C
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 26/257 (10%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSI---------LSSCSHMG 56
N V+++ +I V+EG+ EA EL M G+ PD T S+ L + M
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 57 DLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV----VSWN 112
DL + K CD NI N L+N Y K + +++F M + V V++N
Sbjct: 392 DLMVSKG-----CDPNIRTF----NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 113 VIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSST 172
+I G A E+F++M + + P+ +T+ LL +G E F + +
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 173 FGISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPM---KPDAVVWGALLGACKTFGNLEM 229
+ D+ Y ++ + + +A L LP+ KP + ++G G L
Sbjct: 503 -KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 230 GKQILKQLLELGRYDSG 246
+ + +++ E G G
Sbjct: 562 AELLFRKMEEDGHAPDG 578
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V + V++N++I + G+ A ELF M V P+ T +L G+ +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV----SWNVIIGALA 119
+ I + + + + + N +++ + A D+F +P K V ++N++IG L
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
G EA +F KM G PD T+ L+ A
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++NS+I C G+ ++A L M + P+ T +++ + G L +K +
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
D + +I + +SL+N + L A +F M K NVV++N +I
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
E +E+F +M GL + +T+T L+ + + + F M S G+ PD+
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMT 468
Query: 182 YACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALL-GACKTFGNLEMG 230
Y+ ++D L G + A+ + +Q+ M+PD + ++ G CK G +E G
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA-GKVEDG 520
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 138/296 (46%), Gaps = 13/296 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
++ ++N++I + + +EA+ L RM V G PD T +++ GD+ L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ I V + N++++ + A+++F M K NVV++N +I L +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSSTFGISPDVA 180
G +A + M + P+ +TF+ L+ A G LVE + Y ++ + I PD+
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--IDPDIF 362
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKTFGNLEMGKQILKQ 236
Y+ +++ L EA + + + K P+ V + L+ G CK ++ G ++ ++
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA-KRVDEGMELFRE 421
Query: 237 LLELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
+ + G ++ Y L + + +++ D+ + + K M G+ SI +DG C
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N V++ ++I Q + A +F +M GV+PD T +L + G +
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+Y+ + + + N ++ K G ++ D+F + K NVV++ ++
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG--------LVEMGRYYFGLMSS 171
G +EA +F +M+ G PD T+ L+ A G + EM F +S
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 607
Query: 172 TFGISPDVAH 181
T G+ ++ H
Sbjct: 608 TIGLVTNMLH 617
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +++ +I+C + Q + A+ + +M G PD TL S+L+ H
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH----------- 163
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGK 125
N I+ +V+L ++ M Q + ++N +I L H
Sbjct: 164 ----GNRISDAVSLVGQMVEMGY----------------QPDSFTFNTLIHGLFRHNRAS 203
Query: 126 EAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
EA+ + ++M G PD +T+ +++ G +++ M I P V Y +
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG-KIEPGVVIYNTI 262
Query: 186 VDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+D L + +A++L ++ ++P+ V + +L+ +G ++L ++E
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 36/260 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
NAV++ +II + + G AEA LF M + G++PD+ +++ C + D+ ++A
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV---ERAI 752
Query: 66 DYICDNN--ITVSVTLCNSLMNMYAKCGALQTAMDIF----------FGMPQKNVVSWNV 113
N S N+L+N K G + ++ FG P N V++N+
Sbjct: 753 TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP--NDVTYNI 810
Query: 114 IIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY--YFGLMSS 171
+I L G+ + A E+F +M+ + L P IT+T LL +G +MGR F +
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL-----NGYDKMGRRAEMFPVFDE 865
Query: 172 TF--GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWG---------ALLGA 220
GI PD Y+ +++ + G +A+ L+ ++ K +AV G ALL
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK-NAVDDGCKLSISTCRALLSG 924
Query: 221 CKTFGNLEMGKQILKQLLEL 240
G +E+ +++++ ++ L
Sbjct: 925 FAKVGEMEVAEKVMENMVRL 944
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 8/236 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
NA ++ + IS +++ + A A + M GV+P+ +++ G + A+
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ D I LMN K + A +IF M K +V S+ V+I +
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G+ ++A +F++M GL P+ I + LL SG +E + MS G+ P+
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPNAVT 699
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQIL 234
Y ++D + G L EA L ++ +K PD+ V+ L+ C ++E I
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 109/243 (44%), Gaps = 13/243 (5%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+A ++ +++ + + +A E+F M G+ PD + +++ S +G++
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
D + + +T +V + N L+ + + G ++ A ++ M K N V++ II
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA +F++M+ GL PD +T L+ C VE FG ++ G + A
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKGCASSTAP 768
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP-------MKPDAVVWGALLGACKTFGNLEMGKQIL 234
+ +++ + + G ++ +L KP+ V + ++ GNLE K++
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 235 KQL 237
Q+
Sbjct: 829 HQM 831
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 126/300 (42%), Gaps = 21/300 (7%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V + ++I +Q + +AM + M G+ PD S++ S + +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNV----IIGALALH 121
+ +N + + + ++ Y + +A M + V+ V +I
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G EA + M G+ D T+T L++ + V+ F M GI+PDV
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK-GIAPDVFS 629
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y +++ + G + +A S+ ++ + P+ +++ LLG G +E K++L ++
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 239 ELGRYDSGL-YVLLSNMY------SESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
G + + + Y + + Y +E+ R D K++ ++ DS + + +DGCC
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS------FVYTTLVDGCC 743
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 129/278 (46%), Gaps = 9/278 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++N +I + + EAM +F +M +G PD T +++ + G L + +
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ + ++ + ++N K G L A +F M + N+V++N++I A
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKA 512
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ + A++++ M+ +G PD++T++ ++ H G +E F M + PD
Sbjct: 513 RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPV 571
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y +VDL G+ G + +A Q + ++P+ +LL + +L+ +L
Sbjct: 572 YGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Query: 239 ELGRYDS-GLYVLLSNMYSESQRWDDMKKIRKIMNDSG 275
LG + S Y LL + ++++ DM ++M SG
Sbjct: 632 ALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSG 669
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 117/256 (45%), Gaps = 17/256 (6%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++ ++I H + G AM+++ RM +G+ PD T I++ G L AH
Sbjct: 428 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP---AAH 484
Query: 66 DYICD---NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGAL 118
C+ T ++ N ++ ++AK +TA+ ++ M Q + V++++++ L
Sbjct: 485 RLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL 544
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G +EA +F +M+ PDE + L+ +G V+ ++ M G+ P+
Sbjct: 545 GHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQA-GLRPN 603
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQK---LPMKPDAVVWGALLGACK-TFGNLEMGKQIL 234
V ++ R + EA +L+Q L + P + LL C N +MG
Sbjct: 604 VPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMG--FC 661
Query: 235 KQLLELGRYDSGLYVL 250
QL+ + + + +++L
Sbjct: 662 GQLMAVSGHPAHMFLL 677
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 22/254 (8%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNAT---LVSILSSCSHM--GDLALGK 62
V++N+++ + ++G+ A+EL M GV D T L+ L + + G L L
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIF-----FGMPQKNVVSWNVIIGA 117
I N +T N+L+N ++ G + A + FG+ N V++N +I
Sbjct: 329 MRKRMIHPNEVTY-----NTLINGFSNEGKVLIASQLLNEMLSFGL-SPNHVTFNALIDG 382
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
G+ KEA++MF M A GL P E+++ LL + ++ R ++ M G+
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN-GVCV 441
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALL-GACKTFGNLEMGKQI 233
Y M+D L + GFL EA+ L+ ++ + PD V + AL+ G CK G + K+I
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV-GRFKTAKEI 500
Query: 234 LKQLLELGRYDSGL 247
+ ++ +G +G+
Sbjct: 501 VCRIYRVGLSPNGI 514
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 45/275 (16%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSS-CSHMG-DLALG-- 61
N V++N++I H+ EG EA+++F M G+ P + +L C + DLA G
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 431
Query: 62 -KKAHDYICDNNITVS---------------VTLCN---------------SLMNMYAKC 90
+ + +C IT + V L N +L+N + K
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 491
Query: 91 GALQTAMDIFFGMPQ----KNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
G +TA +I + + N + ++ +I G KEAI ++E M G D TF
Sbjct: 492 GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTF 551
Query: 147 TGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSL---IQ 203
L+++ +G V + M+S GI P+ + C+++ G G +A S+ +
Sbjct: 552 NVLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 204 KLPMKPDAVVWGALL-GACKTFGNLEMGKQILKQL 237
K+ P +G+LL G CK G+L ++ LK L
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKG-GHLREAEKFLKSL 644
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 110/271 (40%), Gaps = 18/271 (6%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
++ ++N +++ + G+ AEA E M G++P+ + +++ + G+
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTA---MDIFFGMPQK-NVVSWNVIIGALA 119
D + + SL+ K G L+ A + +P + V +N ++ A+
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G+ +A+ +F +M + PD T+T L+S G + + + + P+
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724
Query: 180 AHYACMVDLLGRGG------FLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQI 233
Y C VD + + G + E M L PD V A++ G +E +
Sbjct: 725 VMYTCFVDGMFKAGQWKAGIYFREQM---DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 234 LKQLLELGRYDSGLYVLLSN--MYSESQRWD 262
L E+G + G + N ++ S+R D
Sbjct: 782 LP---EMGNQNGGPNLTTYNILLHGYSKRKD 809
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 46/261 (17%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLA------ 59
N ++ +I +++EG +++E+F M + G P T +IL S G+
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 60 ---LGKKAHDYICDNNITVSVTLC---------------------------NSLMNMYAK 89
L +K + NI ++V LC N++++ Y K
Sbjct: 222 KEMLKRKICPDVATFNILINV-LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 90 CGALQTAMDIFFGMPQK----NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEIT 145
G + A+++ M K +V ++N++I L + + MR + P+E+T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 146 FTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL 205
+ L++ S+ G V + M S FG+SP+ + ++D G EA+ + +
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 206 PMK---PDAVVWGALL-GACK 222
K P V +G LL G CK
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCK 420
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 11/225 (4%)
Query: 76 SVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALHGSGKEAIEMF 131
SV CN+++ K G + M ++ +V ++N++I L GS +++ +
Sbjct: 197 SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM 256
Query: 132 EKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGR 191
+KM SG P +T+ +L G + M S G+ DV Y ++ L R
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK-GVDADVCTYNMLIHDLCR 315
Query: 192 GGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDS--G 246
+ + L++ + + P+ V + L+ G + + Q+L ++L G +
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 247 LYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
L+ SE + + K+ +M G+ + +DG C
Sbjct: 376 FNALIDGHISEGN-FKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 117/247 (47%), Gaps = 9/247 (3%)
Query: 4 VKNAVSWNSIISCHVQEGQHAE--AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALG 61
V + +S+N++I+ ++ G A+EL + SG+ PD T ++LS+CS +L
Sbjct: 257 VPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGA 316
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGA 117
K + + + + N+++++Y +CG A +F + K + V++N ++ A
Sbjct: 317 VKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
A + ++ E++++M+ G DE+T+ ++ G +++ + M G +P
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQIL 234
D Y ++D LG+ EA +L+ ++ +KP + AL+ G E +
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 235 KQLLELG 241
+L G
Sbjct: 497 SCMLRSG 503
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 6/202 (2%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
++N++IS + + G AEA LF + + G PD T S+L + + + K+ + +
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP-----QKNVVSWNVIIGALALHGS 123
N++++MY K G L A+ ++ M + +++ V+I +L
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EA + +M G+ P T++ L+ + +G E F M + G PD Y+
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYS 512
Query: 184 CMVDLLGRGGFLGEAMSLIQKL 205
M+D+L RG +A L + +
Sbjct: 513 VMLDVLLRGNETRKAWGLYRDM 534
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 74 TVSVTLCNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVIIGALALHGSGKEAIE 129
T + NSLM+ YA+CG + A IF M P V S N+++ AL + G +E
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 130 MFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSSTFGISPDVAHYACMVDL 188
+ E+++ G + + +L A + +G + E+ + Y + ++ G P + Y M++L
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA--GYLPTIRLYRMMIEL 901
Query: 189 LGRGGFLGEA---MSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYD 244
L +G + +A +S +++ K + +W ++L + + Q+ +++ E G D
Sbjct: 902 LCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Query: 245 SGLYVLLSNMYSESQRWDD----MKKIRKIMNDSGIKKCRAISS 284
Y L MY +R ++ M+++R + D + +++ S
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 91/232 (39%), Gaps = 50/232 (21%)
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKMRAS----------------------------- 137
V +N ++G + G +A E+ + MR
Sbjct: 224 RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 138 --------GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLL 189
GL PD IT+ LLSACS ++ F M + PD+ Y M+ +
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEA-HRCQPDLWTYNAMISVY 342
Query: 190 GRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLLELGR-YDS 245
GR G EA L +L +K PDAV + +LL A N E K++ +Q+ ++G D
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 246 GLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD 297
Y + +MY + + D ++ K M + +S D Y ++D
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDM--------KGLSGRNPDAITYTVLID 446
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 13/277 (4%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSG-VMPDNATLVSILSSCSHMGDLALGKKAHDY 67
++NS+I +QEGQH + E++ MC G PD T +++SS +G + D
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSWNVIIGALALHGS 123
+ DN + + + +L+ +Y K G ++ A+D+F M + V ++ +I L G
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
EA ++ M GL PD + L++ G VE F M + +P V Y
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM-GMWRCTPTVVSYN 377
Query: 184 CMVD-LLGRGGFLGEAMSLIQKLP---MKPDAVVWGALL-GACKTFGNLEMGKQILKQLL 238
++ L + E S K+ + P + L+ G CKT +E +L+++
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT-NRVEKALLLLEEMD 436
Query: 239 ELGRYD-SGLYVLLSNMYSESQRWDDMKKIRKIMNDS 274
E G Y L N +++R++ ++ K + ++
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 81 NSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALHGSGKEAIEMFEKMRA 136
N+LM+ K G + A + M + ++ S N+I+ A G + AIEMFE ++
Sbjct: 518 NALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 137 SGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLG 190
SG+ PD +T+ LL +H+G+ E M G D Y+ ++D +G
Sbjct: 578 SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK-GFEYDAITYSSILDAVG 630
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 10/250 (4%)
Query: 8 VSWNSIISCHVQEGQH-AEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHD 66
VS+N++I + H +E F +M V P T ++ + +
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 67 YICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK--NVVS--WNVIIGALALHG 122
+ + SL+N K + A ++F + + NV S + V+I G
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 123 SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
EA+++F +M+ G PD + L+S +G++ M G D+ +
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN-GCRADINSH 552
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
+++ R G A+ + + + +KPD V + LLG G E ++++++ +
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 240 LG-RYDSGLY 248
G YD+ Y
Sbjct: 613 KGFEYDAITY 622
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 9/278 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++N +I + + EAM +F +M +G PD T +++ + G L + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ ++ + ++N K G L A +F M + N+V++N+++ A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ + A++++ M+ +G PD++T++ ++ H G +E F M I PD
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPV 576
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y +VDL G+ G + +A Q + ++P+ +LL + ++L+ +L
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 239 ELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSG 275
LG R Y LL + ++ + DM ++M +G
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
Q N V++N +I + EA+ +F +M+ +G PD +T+ L+ + +G +++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI 202
+ M + G+SPD Y+ +++ LG+ G L A L
Sbjct: 456 MYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 9/254 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++N +I + + EAM +F +M +G PD T +++ + G L + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ ++ + ++N K G L A +F M + N+V++N+++ A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ + A++++ M+ +G PD++T++ ++ H G +E F M I PD
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPV 576
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y +VDL G+ G + +A Q + ++P+ +LL + ++L+ +L
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 239 ELG-RYDSGLYVLL 251
LG R Y LL
Sbjct: 637 ALGLRPSLQTYTLL 650
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++ ++I H + G AM+++ RM G+ PD T I++ G L K
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
+ D T ++ N +M+++AK Q A+ ++ M + + V++++++ L
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA +F +M+ PDE + L+ +G VE ++ M G+ P+V
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA-GLRPNVPT 611
Query: 182 YACMVDLLGRGGFLGEAMSLIQK---LPMKPDAVVWGALLGAC 221
++ R + EA L+Q L ++P + LL C
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
Q N V++N +I + EA+ +F +M+ +G PD +T+ L+ + +G +++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI 202
+ M + G+SPD Y+ +++ LG+ G L A L
Sbjct: 456 MYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 9/254 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++N +I + + EAM +F +M +G PD T +++ + G L + +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ ++ + ++N K G L A +F M + N+V++N+++ A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
+ + A++++ M+ +G PD++T++ ++ H G +E F M I PD
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPV 576
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y +VDL G+ G + +A Q + ++P+ +LL + ++L+ +L
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 239 ELG-RYDSGLYVLL 251
LG R Y LL
Sbjct: 637 ALGLRPSLQTYTLL 650
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++ ++I H + G AM+++ RM G+ PD T I++ G L K
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
+ D T ++ N +M+++AK Q A+ ++ M + + V++++++ L
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +EA +F +M+ PDE + L+ +G VE ++ M G+ P+V
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA-GLRPNVPT 611
Query: 182 YACMVDLLGRGGFLGEAMSLIQK---LPMKPDAVVWGALLGAC 221
++ R + EA L+Q L ++P + LL C
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC 654
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 105 QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRY 164
Q N V++N +I + EA+ +F +M+ +G PD +T+ L+ + +G +++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 165 YFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLI 202
+ M + G+SPD Y+ +++ LG+ G L A L
Sbjct: 456 MYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 117/247 (47%), Gaps = 12/247 (4%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N +++N ++ V+EG+ EA EL+ M G+ P+ T +++ L+
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
D + N + + SL+ Y + M +F + ++ N V++++++
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF-GLMSSTFGISPD 178
G K A E+F++M + G+ PD +T+ LL +G +E F L S +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG-- 472
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALL-GACKTFGNLEMGKQIL 234
+ Y +++ + +GG + +A +L LP +KP+ + + ++ G CK G+L +L
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK-GSLSEANILL 531
Query: 235 KQLLELG 241
+++ E G
Sbjct: 532 RKMEEDG 538
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 133/295 (45%), Gaps = 11/295 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ ++N++I EG+ +EA+ L RM +G PD T SI++ GD +L
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ + N+ V +++++ + G + A+ +F M K +VV++N ++ L
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSSTFGISPDVA 180
G + + + M + + P+ ITF LL G L E Y ++ T GISP++
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI--TRGISPNII 334
Query: 181 HYACMVDLLGRGGFLGEA---MSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
Y ++D L EA + L+ + PD V + +L+ ++ G ++ + +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 238 LELGRYDSGL-YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
+ G + + Y +L + +S + +++ + M G+ I +DG C
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 5/190 (2%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V NAV+++ ++ Q G+ A ELF M GV+PD T +L G L +
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+ + + + + + + +++ K G ++ A ++F +P K NV+++ V+I L
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
GS EA + KM G P++ T+ L+ A G + M S G S D
Sbjct: 520 KKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC-GFSADA 578
Query: 180 AHYACMVDLL 189
+ ++D+L
Sbjct: 579 SSIKMVIDML 588
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 9/294 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N + N +I+C + + A + ++ G PD T +++ G ++
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKN----VVSWNVIIGALALH 121
D + +N V NS++N + G A+D+ M ++N V +++ II +L
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G AI +F++M G+ +T+ L+ +G G M S I P+V
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVIT 300
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQLL 238
+ ++D+ + G L EA L +++ + P+ + + L+ L +L ++
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 239 ELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
D + L Y +R DD K+ + ++ G+ SI + G C
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 124/292 (42%), Gaps = 17/292 (5%)
Query: 22 QHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICDNNITVSVTLCN 81
+ +A+ LF M S +P S+ + L + N I ++ N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 82 SLMNMYAKC-------GALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKM 134
++N + +C L M + + + + ++N +I L L G EA+ + ++M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGY---EPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 135 RASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGF 194
+G PD +T+ +++ SG + M + DV Y+ ++D L R G
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER-NVKADVFTYSTIIDSLCRDGC 243
Query: 195 LGEAMSLIQKLP---MKPDAVVWGALL-GACKTFGNLEMGKQILKQLLELGRYDSGL-YV 249
+ A+SL +++ +K V + +L+ G CK G G +LK ++ + + +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA-GKWNDGALLLKDMVSREIVPNVITFN 302
Query: 250 LLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDDKNH 301
+L +++ + + + ++ K M GI + +DG C Q + + N+
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 118/241 (48%), Gaps = 8/241 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ +S+N++I +E + +A++++ + D T +L+S GD+ +
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
I D+ I + ++++ + K G L A + M Q +V +N ++ +L
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
GS +A +FE+M+ FPD ++F ++ +G ++ MS G+SPD+
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA-GLSPDLFT 601
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGACKTFGNLEMGKQILKQLL 238
Y+ +++ + G+L EA+S K+ +PDA + ++L C + G + +++K+L+
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Query: 239 E 239
+
Sbjct: 662 D 662
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 15/302 (4%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+W +I + G+ EAM M G+ D S++ G+L GK D
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALHGS 123
+ + + N+L+ + K G L+ A +IF M ++ NV ++ +I L G
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHYA 183
KEA+++ M P+ +T+ +++ GLV LM PD Y
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR-RTRPDNITYN 391
Query: 184 CMVDLLGRGGFLGEAMSLIQKLPMK------PDAVVWGALL-GACKTFGNLEMGKQILKQ 236
++ L G L EA L+ L +K PD + + AL+ G CK L I
Sbjct: 392 ILLGGLCAKGDLDEASKLLY-LMLKDSSYTDPDVISYNALIHGLCKE-NRLHQALDIYDL 449
Query: 237 LLE-LGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFM 295
L+E LG D +L N ++ + ++ K ++DS I + + IDG C M
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 296 VD 297
++
Sbjct: 510 LN 511
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 115/238 (48%), Gaps = 10/238 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK-A 64
NAV++N II+ ++G A+A+E+ M PDN T +L GDL K
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 65 HDYICDNNIT-VSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+ + D++ T V N+L++ K L A+DI+ + +K + V+ N+++ +
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G +A+E+++++ S + + T+T ++ +G++ + + M + + P V
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS-ELQPSV 529
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQIL 234
Y C++ L + G L +A L +++ PD V + ++ G+++ + +L
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 42/262 (16%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N V +N++I+ + A+E+F M G+ D T +++S S+ G +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+ I +V +L++ + K G L A +++ M ++ NV ++N +I
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF------GLMSSTF 173
+HG +A MF+ M + G FPD +T+ L++ S VE G F GL+ F
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 174 ----------------------------GISPDVAHYACMVDLLGRGGFLGEAMSLI--- 202
G+SPD+ Y ++D L G + +A+ ++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 203 QKLPMKPDAVVWGALL-GACKT 223
QK M D + + ++ G C+T
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRT 442
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++N++I+ + + + M+LFC M G++ D T +++ G L + +K
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ + D ++ + N L++ G ++ A+ + + + +++++N+II L
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGL 158
KEA +F + G+ PD I + ++S GL
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 139/304 (45%), Gaps = 11/304 (3%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ N V +N+II + + G A +F + + G MP T ++++ GD +
Sbjct: 237 IPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDR 296
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCG-ALQTAMDIFFGMP---QKNVVSWNVIIGALA 119
+ + + VSV N++++ + G + A I + + + +V ++N++I L
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLC 356
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G + A+ ++ GL P+ +++ L+ A S ++ M+ G PD+
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER-GCKPDI 415
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALL-GACKTFGNLEMGKQILK 235
Y ++ L G + +A+++ KL + PDA ++ L+ G CKT G K +
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT-GRFLPAKLLFS 474
Query: 236 QLLELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQF 294
++L+ D+ +Y L + + S +D+ +K+ + + G+K + I G C
Sbjct: 475 EMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSG 534
Query: 295 MVDD 298
M+D+
Sbjct: 535 MLDE 538
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 9/221 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+A +N ++S + G+ A LF M ++PD +++ GD +K
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV----SWNVIIGALALH 121
+ + V V N+++ + + G L A+ M ++++V +++ II
Sbjct: 509 SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQ 568
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
AI++F M + P+ +T+T L++ G +M F M + P+V
Sbjct: 569 QDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR-DLVPNVVT 627
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK----PDAVVWGALL 218
Y ++ L + E +L M P+ V + LL
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 18/225 (8%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKA- 64
N V +N +IS +E + EA+E+F M G PD T S++S + ++ K A
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI---KHAL 514
Query: 65 ---HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMD-----IFFGMPQKNVVSWNVIIG 116
D I + + +VT N+L+N + + G ++ A +F G P + ++N +I
Sbjct: 515 WLLRDMISEGVVANTVTY-NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI-TYNSLIK 572
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
L G +A +FEKM G P I+ L++ SG+VE + M G +
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GST 631
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALL 218
PD+ + +++ L R G + + +++ +KL + PD V + L+
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 16/230 (6%)
Query: 2 MPVK----NAVSWNSIIS--CHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHM 55
MP K + ++NS+IS C V E +HA + L M GV+ + T +++++
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHA--LWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 56 GDLALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSW 111
G++ +K + + + NSL+ + G + A +F M + + +S
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 112 NVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS 171
N++I L G +EA+E ++M G PD +TF L++ +G +E G F + +
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Query: 172 TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ---KLPMKPDAVVWGALL 218
GI PD + ++ L +GGF+ +A L+ + P+ W LL
Sbjct: 663 E-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 6/224 (2%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N+V + ++I + + EA++L M + G +PD T ++ + K
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
+ + LMN K G + A D+F+ +P+ +V +N +I HG
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 124 GKEAIEMFEKMRAS-GLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+A + M S G+ PD T+ L+ GLV + M + G P+V Y
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSY 427
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLP---MKPDAVVWGALLGA-CK 222
+VD + G + EA +++ ++ +KP+ V + L+ A CK
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 2 MPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLAL 60
+P V +N++I V G+ +A + M S G++PD T S++ G + L
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 61 GKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIG 116
+ + + +V L++ + K G + A ++ M + N V +N +I
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 117 ALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGIS 176
A EA+E+F +M G PD TF L+S ++ + M S G+
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVV 526
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK--P-DAVVWGALL-GACKTFGNLEMGKQ 232
+ Y +++ R G + EA L+ ++ + P D + + +L+ G C+ G ++ +
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA-GEVDKARS 585
Query: 233 ILKQLLELGRYDSGL 247
+ +++L G S +
Sbjct: 586 LFEKMLRDGHAPSNI 600
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P N V++ ++I+ + G+ A +LF M G+ PD +++ G L +G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVIIGAL 118
K + + V + +S +++Y K G L TA ++ M NVV++ ++I L
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS--TFGIS 176
G EA M+ ++ G+ P +T++ L+ G + G F L G
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG---FALYEDMIKMGYP 458
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALL-GACK 222
PDV Y +VD L + G + AM K+ ++ + VV+ +L+ G C+
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 128/282 (45%), Gaps = 13/282 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSS-CSHMGDLALGKKA 64
+ ++ +++ + EG+ EA+ LF RM G+ PD +++ + C HM +G +
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP-TIGLQL 588
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF----GMPQKNVVSWNVIIGALAL 120
D + N I+ + +CN ++++ KC ++ A F G + ++V++N +I
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
EA +FE ++ + P+ +T T L+ + ++ F +M+ G P+
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAV 707
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKTFGNLEMGKQILKQ 236
Y C++D + + + L +++ K P V + ++ G CK G ++ I Q
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR-GRVDEATNIFHQ 766
Query: 237 LLELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
++ D Y +L Y + R + + + M +G+K
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 5/186 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++ +I Q+G+ EA ++ ++ G+ P T S++ G+L G +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVIIGALALH 121
+ + V + L++ +K G + AM M + NVV +N +I
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA+++F M G+ PD TFT ++ G +E + F M G+ PD
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALA 568
Query: 182 YACMVD 187
Y ++D
Sbjct: 569 YCTLID 574
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 3 PVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGK 62
P N V++ ++I+ + G+ A +LF M G+ PD +++ G L +G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVIIGAL 118
K + + V + +S +++Y K G L TA ++ M NVV++ ++I L
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS--TFGIS 176
G EA M+ ++ G+ P +T++ L+ G + G F L G
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG---FALYEDMIKMGYP 458
Query: 177 PDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALL-GACK 222
PDV Y +VD L + G + AM K+ ++ + VV+ +L+ G C+
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 19/288 (6%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSIL-------SSCSHMGDL 58
N V +NS+I + + EA+++F M + G+ PD AT +++ + C HM
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP- 553
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFF----GMPQKNVVSWNVI 114
+G + D + N I+ + +CN ++++ KC ++ A F G + ++V++N +
Sbjct: 554 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 613
Query: 115 IGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFG 174
I EA +FE ++ + P+ +T T L+ + ++ F +M+ G
Sbjct: 614 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-G 672
Query: 175 ISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKTFGNLEMG 230
P+ Y C++D + + + L +++ K P V + ++ G CK G ++
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR-GRVDEA 731
Query: 231 KQILKQLLELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIK 277
I Q ++ D Y +L Y + R + + + M +G+K
Sbjct: 732 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 49/257 (19%)
Query: 30 FCRMCVSGVMPDNATLVS-ILSSCSHMGDLALGKKAHDYICDNNITVSVTLCNSLM---- 84
F ++C G+ P + +L + G++ H + + V + CN ++
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 85 --NMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPD 142
+ L +D P NVV++ +I G A ++F+ M G+ PD
Sbjct: 264 VDQIEVASRLLSLVLDC---GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320
Query: 143 EITFTGLLSACSHSGLVEMGRYYFG------------LMSSTF----------------- 173
I ++ L+ +G++ MG F + SST
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 174 -----GISPDVAHYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALL-GACKTF 224
GISP+V Y ++ L + G + EA + I K M+P V + +L+ G CK
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC- 439
Query: 225 GNLEMGKQILKQLLELG 241
GNL G + + ++++G
Sbjct: 440 GNLRSGFALYEDMIKMG 456
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 139/329 (42%), Gaps = 44/329 (13%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++N +I + +EG ++A E M G++PD + ++ G + K
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV----VSWNVIIGALALH 121
D + N ++ L++ + + G L+ A+ + M Q+ V V + V+I H
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
K + ++M GL PD++ +T ++ A S +G + + LM + G P+
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEVT 719
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL-PMK--PDAVVWGALL-----GACKTFGNLEMGKQI 233
Y +++ L + GF+ EA L K+ P+ P+ V +G L G +E+ I
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 234 LKQLL--------------ELGRYDSGLYVLL--------------SNMYSESQRWDDMK 265
LK LL GR + ++ + M +E R +D+K
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 266 KIRKI---MNDSGIKKCRAISSIEIDGCC 291
K ++ M + GI+ R + I GCC
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCC 868
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 9/226 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N +N++I + + EA LF RM G+ P++ T ++ G L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ D + +SV NSL+N + K G + A M K VV++ ++G
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G +A+ ++ +M G+ P TFT LLS +GL+ F M+ + + P+
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVT 544
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKT 223
Y M++ G + +A ++++ K PD + L+ G C T
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 12/225 (5%)
Query: 26 AMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI----CDNNITVSVTLCN 81
AMELF M G+ PD ++ S + DL+ K+ ++ CD NI L +
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 82 SLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFP 141
L A+ D+ + +VV++ ++ L + +EM ++M P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 142 DEITFTGLLSACSHSGLVEMGRYYFGLMSST--FGISPDVAHYACMVDLLGRGGFLGEAM 199
E + L+ G +E L+ FG+SP++ Y ++D L +G EA
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEA---LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 200 SLIQ---KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
L K+ ++P+ V + L+ G L+ L ++++ G
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 112/226 (49%), Gaps = 10/226 (4%)
Query: 59 ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVI 114
++ K D I + V ++++ Y++ G + A+D+F M P +V++NVI
Sbjct: 192 SVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 251
Query: 115 IGALALHG-SGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTF 173
+ G S ++ + + ++MR+ GL DE T + +LSAC+ GL+ + +F + S
Sbjct: 252 LDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC- 310
Query: 174 GISPDVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMG 230
G P Y ++ + G+ G EA+S+++++ D+V + L+ A G +
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 231 KQILKQLLELGRYDSGL-YVLLSNMYSESQRWDDMKKIRKIMNDSG 275
+++ + + G + + Y + + Y ++ + D+ K+ M ++G
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 140/351 (39%), Gaps = 66/351 (18%)
Query: 1 MMPVKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLAL 60
+MP NA+++ ++I + + G+ EA++LF M +G +P+ T ++LS L
Sbjct: 382 VMP--NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS--------LL 431
Query: 61 GKKAHD-----YICD---NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM------PQK 106
GKK+ +CD N + + N+++ + G + +F M P +
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 107 NVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYF 166
+ ++N +I A GS +A +M+ +M +G T+ LL+A + G G
Sbjct: 492 D--TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 167 GLMSSTFGISPDVAHYACMVDLLGRGG-FLG----------------------------- 196
M S G P Y+ M+ +GG +LG
Sbjct: 550 SDMKSK-GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFK 608
Query: 197 --------EAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGL 247
A +L +K KPD V++ ++L + + IL+ + E G D
Sbjct: 609 CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT 668
Query: 248 YVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVDD 298
Y L +MY ++I K + S +K + I G C + ++ +
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 11 NSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYICD 70
++++S +EG EA E F + G P T ++L G + +
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 71 NNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALHGSGKE 126
N+ N L+ Y + G + A + M +K N +++ +I A G E
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 127 AIEMFEKMRASGLFPDEITFTGLLSAC-SHSGLVEMGRYYFGLMSSTFGISPDVAHYACM 185
A+++F M+ +G P+ T+ +LS S EM + + S+ G SP+ A + M
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN--GCSPNRATWNTM 462
Query: 186 VDLLGRGG---FLGEAMSLIQKLPMKPDAVVWGALLGA 220
+ L G G F+ ++ +PD + L+ A
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 63 KAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-----NVVSWNVIIGA 117
K D + + N +V N+L++ Y L AM F +P+K ++V++N +I A
Sbjct: 143 KLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKA 202
Query: 118 LALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISP 177
L GS + + +FE++ +G PD I+F LL L G + LM S +SP
Sbjct: 203 LCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK-NLSP 261
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLE 228
++ Y V L R +A++LI + + PD + AL+ A + NLE
Sbjct: 262 NIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCR-MCVSGVMPDNATLVSILSSCSHMGDLALGKKA 64
N ++ N +IS V+ G +A++L+ M P T ++ S G L K+
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV----SWNVIIGALAL 120
+ + D + + N L+N + K G A +F M ++ V +++V++ L +
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
G E + F++++ SGL PD + + +++ S +E F M ++ GI+PD+
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 181 HYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
Y ++ LG G + EA + IQ+ ++P+ + AL+ G E + + +
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 238 LELG-RYDSGLYVLLSN 253
+ G ++G Y L N
Sbjct: 1094 VTGGFSPNTGTYEQLPN 1110
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 40/253 (15%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDL----- 58
V NA S+N +I ++ EAME++ RM + G P T S++ D+
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 59 ------ALGKKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NV 108
LG K + Y + T+C + + + G + A +I M + +V
Sbjct: 245 LLKEMETLGLKPNVY--------TFTIC---IRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 109 VSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGL 168
V++ V+I AL A E+FEKM+ PD +T+ LL S + ++ + ++
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 169 MSSTFGISPDVAHYACMVDLLGRGGFLGEA---MSLIQKLPMKPDAVVWGALL------- 218
M G PDV + +VD L + G GEA + +++ + P+ + L+
Sbjct: 354 MEKD-GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 219 ---GACKTFGNLE 228
A + FGN+E
Sbjct: 413 RLDDALELFGNME 425
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 44/242 (18%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V ++V++N ++ C+ + G+ EA++L M +G PD
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD---------------------- 537
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSWNVIIGALA 119
V + NSL+N K + A +F M + VV++N ++ L
Sbjct: 538 -------------VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSA-CSHSGLVEMGRYYFGLMSSTFGISPD 178
+G +EAIE+FE M G P+ ITF L C + + + F +M G PD
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD--MGCVPD 642
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLP--MKPDAVVWGALLGACKTFGNLEMGKQILKQ 236
V Y ++ L + G + EAM ++ + PD V LL +E +I+
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITN 702
Query: 237 LL 238
L
Sbjct: 703 FL 704
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 110/245 (44%), Gaps = 8/245 (3%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
+ N ++N++I ++ + +A+ELF M GV P T + + GD +
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSWNVIIGALA 119
+ + I ++ CN+ + AK G + A IF+G+ + V++N+++ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
G EAI++ +M +G PD I L++ + V+ F M + P V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE-MKLKPTV 573
Query: 180 AHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALLGACKTFGNLEMGKQILKQ 236
Y ++ LG+ G + EA+ L + + K P+ + + L + + ++L +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 237 LLELG 241
++++G
Sbjct: 634 MMDMG 638
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 126/311 (40%), Gaps = 23/311 (7%)
Query: 10 WNSIISCHVQEGQHAEAMELFCRMCVSGVMPD-NATLVSILS-SCSHMGDLALGKKAHDY 67
W +I + E A+ R+ +G+ D ++ LV I+ SC H +
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 68 ICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALHGS 123
D + + N L+ + ++ A D+F + +V ++N ++ A G
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMG-RYYFGLMSSTFGISPDVAHY 182
E E++++M + IT ++S +G V+ Y+ LMS SP Y
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR-DFSPTACTY 894
Query: 183 ACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQLLE 239
++D L + G L EA L + + +P+ ++ L+ G + + K++++
Sbjct: 895 GPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 240 LG-RYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQFMVD- 297
G R D Y +L + R D+ K + +SG+ D CY +++
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP---------DVVCYNLIING 1005
Query: 298 -DKNHEVSTSI 307
K+H + ++
Sbjct: 1006 LGKSHRLEEAL 1016
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++++S+ISC + ++A L M + P+ T +++ + G L +K +
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
D + +I + +SL+N + L A +F M K NVV++N +I
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
E +E+F +M GL + +T+T L+ + + + F M S G+ P++
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMT 472
Query: 182 YACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALL-GACKTFGNLEMG 230
Y ++D L + G L +AM + +Q+ M+P + ++ G CK G +E G
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA-GKVEDG 524
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 131/315 (41%), Gaps = 46/315 (14%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSH----------- 54
N ++N +I+C + Q + A+ L +M G P TL S+L+ H
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 55 -----MG----DLALGKKAHDYICDNNITVSVTLCNSLM---------------NMYAKC 90
MG + H N + +V L + ++ N K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 91 GALQTAMDIFFGMP----QKNVVSWNVIIGALALHGSGKEAIEMFEKMRASGLFPDEITF 146
G + A ++ M + NVV ++ +I +L + +A+ +F +M G+ P+ IT+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 147 TGLLSA-CSHSGLVEMGRYYFGLMSSTFGISPDVAHYACMVDLLGRGGFLGEAMSLIQ-- 203
+ L+S C++ + R ++ I+P+V + ++D + G L EA L
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERK--INPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 204 -KLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELGRYDSGL-YVLLSNMYSESQRW 261
K + PD + +L+ L+ K + + ++ + + + Y L N + +++R
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 262 DDMKKIRKIMNDSGI 276
D+ ++ + M+ G+
Sbjct: 417 DEGVELFREMSQRGL 431
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N V++ ++I Q A +F +M GV P+ T ++L G L
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+Y+ + + ++ N ++ K G ++ D+F + K +V+ +N +I
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEIT 145
G +EA +F KMR G PD T
Sbjct: 552 RKGLKEEADALFRKMREDGPLPDSGT 577
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++N++I+ + + E +ELF M G++ + T +++ D +
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMP----QKNVVSWNVIIGALALH 121
+ + + ++ N+L++ K G L+ AM +F + + + ++N++I +
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G ++ ++F + G+ PD I + ++S GL E F M G PD
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED-GPLPD 574
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 115/248 (46%), Gaps = 6/248 (2%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V++N++I +EG+ EA +L M + PD T +++ L K+
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
++ + ++ N+L+N + KC ++ +++F M Q+ N V++ II
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
G A +F++M ++ + D +T++ LL G ++ F + + + ++
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELNIFI 505
Query: 182 YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILKQLLELG 241
Y M++ + + G +GEA L L +KPD V + ++ + L+ + +++ E G
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 242 RY-DSGLY 248
+SG Y
Sbjct: 566 TLPNSGTY 573
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 12/245 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ ++ ++I + +EA+ L +M G PD T ++++ GD+ L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALALH 121
+ + I +V + N++++ K ++ A+D+F M K NVV++N +I L +
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG-LVEMGRYYFGLMSSTFGISPDVA 180
G +A + M + P+ +TF L+ A G LVE + + ++ + I PD
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS--IDPDTI 364
Query: 181 HYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKTFGNLEMGKQILKQ 236
Y +++ L EA + + + K P+ + L+ G CK +E G ++ ++
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC-KRVEDGVELFRE 423
Query: 237 LLELG 241
+ + G
Sbjct: 424 MSQRG 428
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N V +N+II + A++LF M G+ P+ T S+++ + G + +
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNV----VSWNVIIGALALH 121
+ + I +V N+L++ + K G L A + M Q+++ +++N++I +H
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 122 GSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVAH 181
EA +MF+ M + P+ T+ L++ VE G F MS G+ +
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR-GLVGNTVT 435
Query: 182 YACMVDLLGRGGFLGEAMSLIQKL---PMKPDAVVWGALLGACKTFGNLEMGKQILKQL 237
Y ++ + G A + +++ + D + + LL ++G L+ I K L
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSIL--SSCSHMGDLALG 61
V N V++ +II Q G A +F +M VS +P + SIL CS+ G L
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSILLHGLCSY-GKLDTA 487
Query: 62 KKAHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-NVVSWNVIIGALAL 120
Y+ + + +++ + N+++ K G + A D+F + K +VV++N +I L
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCS 547
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSA 152
+EA ++F KM+ G P+ T+ L+ A
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 116/301 (38%), Gaps = 69/301 (22%)
Query: 9 SWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDYI 68
+++ I+C + Q + A+ + +M G PD TL S+L+ H K+ D
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH------SKRISD-- 171
Query: 69 CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGSGKEAI 128
+V L + ++ M K + ++ +I L LH EA+
Sbjct: 172 -------AVALVDQMVEMGYK----------------PDTFTFTTLIHGLFLHNKASEAV 208
Query: 129 EMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSS----------------- 171
+ ++M G PD +T+ +++ G +++ M +
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 172 -----------------TFGISPDVAHYACMVDLLGRGGFLGEAMSLIQKL---PMKPDA 211
T GI P+V Y +++ L G +A L+ + + P+
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 212 VVWGALLGACKTFGNLEMGKQILKQLLELG-RYDSGLYVLLSNMYSESQRWDDMKKIRKI 270
V + AL+ A G L +++ +++++ D+ Y LL N + R D+ K++ K
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 271 M 271
M
Sbjct: 389 M 389
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 12/246 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVS-GVMPDNATLVSILSSCSHMGDLALGKKA 64
N ++N +++ + EG+ +A+ + RM V PDN T +IL + S G L+ K+
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKEL 262
Query: 65 HDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV----SWNVIIGALAL 120
+ N + + N+L+ Y K G+L+ A I M Q NV+ ++N++I L
Sbjct: 263 LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCN 322
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
GS +E +E+ + M++ L PD +T+ L+ C GL R M + + V
Sbjct: 323 AGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT 382
Query: 181 H-----YACMVDLLGRGGFLGEAMSLIQKLPMKPDAVVWGALLGACKTFGNLEMGKQILK 235
H + C + R + L+ PD V + L+ A G+L ++++
Sbjct: 383 HNISLKWLCKEE--KREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 236 QLLELG 241
++ + G
Sbjct: 441 EMGQKG 446
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 139/318 (43%), Gaps = 34/318 (10%)
Query: 8 VSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAHDY 67
V+++++I +++ G + A+E+ M G+ + TL +IL + L +AH+
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL---DEAHNL 473
Query: 68 ICDNN----ITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQ----KNVVSWNVIIGALA 119
+ + I VT +M + + ++ A++++ M + V ++N +IG L
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFRE-EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDV 179
HG + A+E F+++ SGL PD+ TF ++ G VE ++ S PD
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN-ESIKHSFKPD- 590
Query: 180 AHYACMVDLLG--RGGFLGEAMSLIQKL--PMKPDAVVWGALLGACKTFGNLEMGKQILK 235
+Y C + L G + G +A++ L + D V + ++ A L+ +L
Sbjct: 591 -NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 236 QLLELG------RYDSGLYVLLSN---------MYSESQRWDDMKKIRKIMNDSGIKKCR 280
++ E G Y+S + +L+ + + S ++ MK+ ++ +
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSE 709
Query: 281 AISSIEIDGCCYQFMVDD 298
+ + + Y ++D+
Sbjct: 710 SKEELNTEAIAYSDVIDE 727
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V++ ++I +E + +A+E++ M + P +T S++ H G L +
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVV-----SWNVIIGALAL 120
D + ++ + + NS++ Y K G ++ A + F+ K+ + N+++ L
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFE-FYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSA-CSHSGLVEMGRYYFGLMS--STFGISP 177
G ++A+ F + D +T+ ++SA C L E + L+S G+ P
Sbjct: 604 EGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEA----YDLLSEMEEKGLEP 658
Query: 178 DVAHYACMVDLLGRGGFLGEAMSLIQKL 205
D Y + LL G L E L++K
Sbjct: 659 DRFTYNSFISLLMEDGKLSETDELLKKF 686
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 137/299 (45%), Gaps = 13/299 (4%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
N ++N +I+ + G+ +A ++ M V G P+ + +++ +G KA
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 66 DYI---CDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGM----PQKNVVSWNVIIGAL 118
+ +N+++ ++T N L++ + K L +M +F M + NV+S+N +I L
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 119 ALHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPD 178
G EAI M +KM ++G+ P+ IT+ L++ + +++ FG + G P
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ-GAVPT 400
Query: 179 VAHYACMVDLLGRGGFLGEAMSLIQKLPMK---PDAVVWGALL-GACKTFGNLEMGKQIL 234
Y ++D + G + + +L +++ + PD + L+ G C+ GN+E K++
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN-GNIEAAKKLF 459
Query: 235 KQLLELGRYDSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCCYQ 293
QL G D + +L Y + K M+ G+K +I + G C +
Sbjct: 460 DQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 9/233 (3%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKKAH 65
+ V +N+II + +A +LF +M G+ PD T ++S + G + +
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 66 DYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK-----NVVSWNVIIGALAL 120
+ + NI + N+L++ + K G L A ++ M + +VV++N +I
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 121 HGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSGLVEMGRYYFGLMSSTFGISPDVA 180
+ +E +E+F +M GL + +T+T L+ + + + F M S G+ PD+
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIM 427
Query: 181 HYACMVDLLGRGGFLGEAMSL---IQKLPMKPDAVVWGALLGACKTFGNLEMG 230
Y ++D L G + A+ + +QK MK D V + ++ A G +E G
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 129/295 (43%), Gaps = 45/295 (15%)
Query: 6 NAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMG--DLALGKK 63
+ V++ +++ Q + +EA+ L RM V G PD T ++++ G DLAL
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL--- 235
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQKNVVSWNVIIGALALHGS 123
+L+N K G + +VV +N II L +
Sbjct: 236 ------------------NLLNKMEK------------GKIEADVVIYNTIIDGLCKYKH 265
Query: 124 GKEAIEMFEKMRASGLFPDEITFTGLLSA-CSHSGLVEMGRYYFGLMSSTFGISPDVAHY 182
+A ++F KM G+ PD T+ L+S C++ + R ++ I+PD+ +
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN--INPDLVFF 323
Query: 183 ACMVDLLGRGGFLGEAMSLIQKLPMK----PDAVVWGALL-GACKTFGNLEMGKQILKQL 237
++D + G L EA L ++ PD V + L+ G CK + +E G ++ +++
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK-YKRVEEGMEVFREM 382
Query: 238 LELGRY-DSGLYVLLSNMYSESQRWDDMKKIRKIMNDSGIKKCRAISSIEIDGCC 291
+ G ++ Y L + + +++ D+ + + K M G+ +I +DG C
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 4 VKNAVSWNSIISCHVQEGQHAEAMELFCRMCVSGVMPDNATLVSILSSCSHMGDLALGKK 63
V N V++ ++I Q A +F +M GV PD T +L + G++
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 64 AHDYICDNNITVSVTLCNSLMNMYAKCGALQTAMDIFFGMPQK----NVVSWNVIIGALA 119
+Y+ ++ + + +++ K G ++ D+F + K NVV++ ++
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 120 LHGSGKEAIEMFEKMRASGLFPDEITFTGLLSACSHSG--------LVEMGRYYFGLMSS 171
G +EA +F +M+ G P+ T+ L+ A G + EM F +S
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 172 TFGISPDVAH 181
TFG+ ++ H
Sbjct: 568 TFGLVTNMLH 577